Query 009563
Match_columns 532
No_of_seqs 467 out of 2274
Neff 11.0
Searched_HMMs 46136
Date Thu Mar 28 14:38:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009563.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009563hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00898 2A0119 cation transp 100.0 2.3E-45 4.9E-50 372.8 49.1 455 47-520 1-504 (505)
2 TIGR01299 synapt_SV2 synaptic 100.0 2.9E-44 6.3E-49 366.6 39.5 434 39-518 153-741 (742)
3 KOG0253 Synaptic vesicle trans 100.0 1.2E-41 2.6E-46 301.8 31.9 430 38-518 63-527 (528)
4 TIGR00887 2A0109 phosphate:H+ 100.0 6.8E-40 1.5E-44 331.0 36.0 416 48-522 9-500 (502)
5 KOG0255 Synaptic vesicle trans 100.0 1.1E-36 2.3E-41 309.6 48.8 467 46-527 10-509 (521)
6 KOG0569 Permease of the major 100.0 7.9E-38 1.7E-42 299.6 35.1 384 127-528 60-472 (485)
7 COG2271 UhpC Sugar phosphate p 100.0 4.9E-37 1.1E-41 280.4 29.1 394 48-510 22-433 (448)
8 PRK10077 xylE D-xylose transpo 100.0 3.4E-36 7.3E-41 304.0 36.4 429 49-531 6-478 (479)
9 PRK10642 proline/glycine betai 100.0 4E-35 8.7E-40 295.1 35.4 385 54-518 15-437 (490)
10 TIGR02332 HpaX 4-hydroxyphenyl 100.0 4.6E-34 1E-38 280.8 35.1 385 51-499 4-409 (412)
11 COG2814 AraJ Arabinose efflux 100.0 7.6E-34 1.7E-38 263.9 34.2 367 51-512 9-387 (394)
12 TIGR00903 2A0129 major facilit 100.0 2.7E-34 5.8E-39 276.4 30.7 351 104-512 6-366 (368)
13 KOG0254 Predicted transporter 100.0 1.1E-33 2.4E-38 285.6 33.7 385 127-527 89-500 (513)
14 PRK09556 uhpT sugar phosphate 100.0 5.9E-34 1.3E-38 285.3 30.2 392 49-510 23-448 (467)
15 PRK10406 alpha-ketoglutarate t 100.0 6.7E-33 1.5E-37 275.0 36.2 379 50-517 17-429 (432)
16 TIGR00879 SP MFS transporter, 100.0 1.1E-33 2.3E-38 286.5 31.1 390 113-518 52-478 (481)
17 PRK11551 putative 3-hydroxyphe 100.0 5.7E-33 1.2E-37 274.3 35.5 371 50-510 10-395 (406)
18 PRK03545 putative arabinose tr 100.0 1.2E-32 2.7E-37 269.9 35.2 336 113-511 33-380 (390)
19 PRK11663 regulatory protein Uh 100.0 2.1E-32 4.5E-37 271.4 36.4 387 51-508 19-421 (434)
20 PRK12307 putative sialic acid 100.0 1.7E-32 3.7E-37 272.7 35.1 356 48-485 11-377 (426)
21 PRK09952 shikimate transporter 100.0 5.4E-32 1.2E-36 268.4 37.6 376 52-513 19-435 (438)
22 PRK11273 glpT sn-glycerol-3-ph 100.0 7E-32 1.5E-36 269.1 36.5 399 50-520 24-444 (452)
23 PRK14995 methyl viologen resis 100.0 1.1E-31 2.3E-36 270.4 36.6 392 53-485 4-407 (495)
24 KOG0252 Inorganic phosphate tr 100.0 3.8E-34 8.2E-39 262.6 13.9 426 48-525 34-512 (538)
25 TIGR00891 2A0112 putative sial 100.0 2.4E-31 5.2E-36 263.0 33.4 367 48-485 5-384 (405)
26 PRK09705 cynX putative cyanate 100.0 7E-31 1.5E-35 257.0 34.6 341 113-518 33-389 (393)
27 TIGR00890 2A0111 Oxalate/Forma 100.0 6.2E-32 1.3E-36 264.5 27.2 337 113-503 27-374 (377)
28 TIGR00895 2A0115 benzoate tran 100.0 8.4E-31 1.8E-35 258.5 34.8 376 48-485 10-394 (398)
29 PLN00028 nitrate transmembrane 100.0 3.2E-31 6.9E-36 265.2 32.0 378 48-511 29-433 (476)
30 PF00083 Sugar_tr: Sugar (and 100.0 3.9E-38 8.4E-43 315.5 -19.4 380 125-524 44-450 (451)
31 TIGR00893 2A0114 d-galactonate 100.0 4.3E-31 9.4E-36 260.5 30.0 362 113-508 18-396 (399)
32 PRK05122 major facilitator sup 100.0 1.8E-30 3.9E-35 255.7 33.7 339 114-518 41-396 (399)
33 TIGR00894 2A0114euk Na(+)-depe 100.0 1E-30 2.2E-35 262.5 31.3 413 49-513 13-452 (465)
34 TIGR00711 efflux_EmrB drug res 100.0 2.2E-30 4.7E-35 262.3 31.8 387 55-485 2-404 (485)
35 PRK10213 nepI ribonucleoside t 100.0 1.5E-29 3.2E-34 247.3 36.6 328 113-503 44-383 (394)
36 PRK15034 nitrate/nitrite trans 100.0 1.3E-29 2.9E-34 244.7 35.1 366 51-510 30-453 (462)
37 PRK10504 putative transporter; 100.0 2.7E-29 5.8E-34 252.8 38.5 385 57-485 12-409 (471)
38 PRK15075 citrate-proton sympor 100.0 2.7E-29 5.9E-34 249.3 36.8 344 53-485 13-388 (434)
39 PRK15402 multidrug efflux syst 100.0 4.6E-29 1E-33 246.1 37.2 348 50-485 8-364 (406)
40 PRK03893 putative sialic acid 100.0 1.4E-29 3E-34 256.9 32.4 386 49-499 14-441 (496)
41 PRK03699 putative transporter; 100.0 4.1E-29 8.9E-34 245.1 34.0 365 52-512 4-381 (394)
42 PF07690 MFS_1: Major Facilita 100.0 7.4E-30 1.6E-34 247.4 27.3 323 113-482 20-352 (352)
43 TIGR00710 efflux_Bcr_CflA drug 100.0 8.6E-29 1.9E-33 243.0 35.2 319 113-485 29-356 (385)
44 TIGR00892 2A0113 monocarboxyla 100.0 7.7E-30 1.7E-34 253.9 28.0 388 48-506 12-416 (455)
45 PRK10489 enterobactin exporter 100.0 3.2E-29 6.9E-34 248.0 32.1 358 113-527 41-416 (417)
46 PRK10091 MFS transport protein 100.0 7.1E-29 1.5E-33 242.3 32.8 335 113-510 27-375 (382)
47 PRK12382 putative transporter; 100.0 4.7E-28 1E-32 237.9 35.9 331 114-510 41-388 (392)
48 TIGR00900 2A0121 H+ Antiporter 100.0 1E-28 2.2E-33 240.6 31.0 321 113-485 23-357 (365)
49 PRK03633 putative MFS family t 100.0 4.6E-28 9.9E-33 236.7 34.8 331 113-509 30-370 (381)
50 TIGR00712 glpT glycerol-3-phos 100.0 1.3E-28 2.9E-33 244.7 31.5 391 52-514 24-437 (438)
51 KOG2533 Permease of the major 100.0 2.8E-29 6.1E-34 244.6 25.8 365 51-485 41-424 (495)
52 PRK15403 multidrug efflux syst 100.0 8.2E-28 1.8E-32 236.5 36.1 337 112-502 39-388 (413)
53 TIGR00881 2A0104 phosphoglycer 100.0 1.4E-29 3E-34 248.1 22.8 337 113-485 19-366 (379)
54 PRK10133 L-fucose transporter; 100.0 1.2E-27 2.5E-32 236.4 35.5 342 51-485 22-401 (438)
55 PRK11195 lysophospholipid tran 100.0 8.7E-28 1.9E-32 234.8 32.5 339 113-507 27-376 (393)
56 TIGR00899 2A0120 sugar efflux 100.0 2E-27 4.3E-32 232.4 34.7 337 114-511 23-374 (375)
57 PRK09874 drug efflux system pr 100.0 9.6E-28 2.1E-32 237.4 32.8 338 113-509 38-396 (408)
58 COG2223 NarK Nitrate/nitrite t 100.0 7.6E-28 1.6E-32 221.0 28.8 370 51-511 10-401 (417)
59 PRK11102 bicyclomycin/multidru 100.0 1.5E-27 3.1E-32 233.4 32.8 323 110-485 12-343 (377)
60 PRK10473 multidrug efflux syst 100.0 3.3E-27 7.2E-32 231.9 34.5 328 113-500 27-363 (392)
61 KOG2532 Permease of the major 100.0 4.9E-27 1.1E-31 228.7 35.1 355 116-510 65-446 (466)
62 KOG1330 Sugar transporter/spin 100.0 1.1E-30 2.4E-35 241.2 8.7 354 51-485 29-406 (493)
63 PRK11043 putative transporter; 100.0 9.4E-27 2E-31 229.4 36.7 313 113-485 30-351 (401)
64 TIGR00897 2A0118 polyol permea 100.0 7.3E-27 1.6E-31 229.7 35.7 345 113-510 37-400 (402)
65 PRK11652 emrD multidrug resist 100.0 9.8E-27 2.1E-31 228.7 34.7 315 113-485 32-354 (394)
66 cd06174 MFS The Major Facilita 100.0 8.7E-27 1.9E-31 225.8 31.3 315 113-509 23-350 (352)
67 PRK10054 putative transporter; 100.0 7.1E-27 1.5E-31 228.5 29.5 335 113-506 32-379 (395)
68 PRK11646 multidrug resistance 100.0 2.1E-26 4.6E-31 225.6 32.7 313 113-485 35-353 (400)
69 PRK11010 ampG muropeptide tran 100.0 3E-26 6.4E-31 229.7 34.3 346 113-513 36-405 (491)
70 TIGR00885 fucP L-fucose:H+ sym 100.0 4.1E-26 8.8E-31 223.5 33.6 311 113-485 27-375 (410)
71 TIGR00883 2A0106 metabolite-pr 100.0 1.1E-26 2.4E-31 228.8 29.4 310 125-485 28-369 (394)
72 TIGR00886 2A0108 nitrite extru 100.0 4.5E-27 9.8E-32 229.1 25.8 320 113-477 25-365 (366)
73 TIGR00889 2A0110 nucleoside tr 100.0 2.5E-25 5.5E-30 218.8 32.3 345 113-515 27-407 (418)
74 PRK15011 sugar efflux transpor 100.0 1.2E-24 2.6E-29 213.3 36.7 336 113-512 40-392 (393)
75 TIGR00896 CynX cyanate transpo 99.9 4.9E-25 1.1E-29 213.4 30.0 312 110-485 21-342 (355)
76 TIGR00902 2A0127 phenyl propri 99.9 1.1E-24 2.4E-29 212.7 32.0 331 113-506 28-374 (382)
77 KOG2504 Monocarboxylate transp 99.9 5.8E-26 1.3E-30 224.0 22.4 414 48-511 39-476 (509)
78 PRK11902 ampG muropeptide tran 99.9 8.7E-24 1.9E-28 208.0 35.7 345 113-513 23-392 (402)
79 TIGR00901 2A0125 AmpG-related 99.9 9.2E-25 2E-29 211.7 26.8 311 112-475 11-355 (356)
80 PRK09528 lacY galactoside perm 99.9 1.4E-24 3E-29 215.0 28.0 342 113-509 35-401 (420)
81 PRK08633 2-acyl-glycerophospho 99.9 4.1E-24 8.9E-29 238.6 35.0 314 125-485 45-378 (1146)
82 TIGR00792 gph sugar (Glycoside 99.9 1E-23 2.2E-28 210.6 33.7 320 113-485 24-374 (437)
83 PRK06814 acylglycerophosphoeth 99.9 5.2E-24 1.1E-28 236.8 33.2 312 126-485 51-390 (1140)
84 PTZ00207 hypothetical protein; 99.9 4.8E-24 1E-28 211.9 29.2 387 113-510 51-551 (591)
85 PF06609 TRI12: Fungal trichot 99.9 3.3E-23 7.1E-28 204.4 34.4 362 113-485 68-461 (599)
86 TIGR00806 rfc RFC reduced fola 99.9 2.3E-24 5E-29 203.8 25.0 368 113-505 50-442 (511)
87 PRK10207 dipeptide/tripeptide 99.9 1.5E-23 3.2E-28 209.1 31.1 380 113-509 39-474 (489)
88 TIGR00882 2A0105 oligosacchari 99.9 2.5E-23 5.3E-28 204.5 32.1 341 114-507 28-391 (396)
89 PRK11128 putative 3-phenylprop 99.9 4.5E-23 9.7E-28 201.5 31.8 330 113-505 28-373 (382)
90 PF05977 MFS_3: Transmembrane 99.9 6E-23 1.3E-27 203.8 32.9 334 125-510 43-393 (524)
91 COG0738 FucP Fucose permease [ 99.9 2.4E-22 5.3E-27 183.5 29.2 312 113-485 37-378 (422)
92 KOG3764 Vesicular amine transp 99.9 1E-24 2.2E-29 197.3 13.2 329 125-510 104-453 (464)
93 TIGR00924 yjdL_sub1_fam amino 99.9 8.2E-22 1.8E-26 196.6 33.5 373 119-507 43-464 (475)
94 KOG2615 Permease of the major 99.9 5.5E-23 1.2E-27 185.0 22.2 321 125-485 66-408 (451)
95 TIGR00805 oat sodium-independe 99.9 1E-22 2.3E-27 208.5 20.2 275 113-418 57-415 (633)
96 TIGR02718 sider_RhtX_FptX side 99.9 4E-20 8.7E-25 181.4 34.9 338 113-506 25-386 (390)
97 TIGR01301 GPH_sucrose GPH fami 99.9 1.6E-19 3.4E-24 176.3 36.9 363 113-514 28-475 (477)
98 PRK09669 putative symporter Ya 99.9 8.9E-20 1.9E-24 181.8 34.2 318 113-485 34-382 (444)
99 PRK09584 tppB putative tripept 99.9 8.1E-20 1.8E-24 183.4 33.4 376 113-507 46-475 (500)
100 PF03825 Nuc_H_symport: Nucleo 99.9 3.8E-19 8.3E-24 171.7 32.1 319 113-485 26-358 (400)
101 PRK10429 melibiose:sodium symp 99.9 9.9E-19 2.2E-23 175.3 34.7 323 114-485 32-387 (473)
102 COG2807 CynX Cyanate permease 99.9 8.8E-19 1.9E-23 157.8 28.9 309 113-485 36-353 (395)
103 TIGR00788 fbt folate/biopterin 99.9 1.1E-19 2.5E-24 180.8 25.6 335 113-485 50-407 (468)
104 PF11700 ATG22: Vacuole efflux 99.9 6.1E-18 1.3E-22 166.4 36.1 348 125-516 68-473 (477)
105 COG2211 MelB Na+/melibiose sym 99.8 4.3E-18 9.3E-23 162.4 31.3 320 115-485 39-390 (467)
106 PRK09848 glucuronide transport 99.8 7.6E-18 1.7E-22 168.3 33.2 316 113-485 33-382 (448)
107 PF13347 MFS_2: MFS/sugar tran 99.8 8.3E-19 1.8E-23 174.0 23.9 318 113-485 26-378 (428)
108 KOG4686 Predicted sugar transp 99.8 2E-19 4.3E-24 155.2 15.3 362 113-520 68-452 (459)
109 PRK11462 putative transporter; 99.8 4.4E-17 9.6E-22 162.2 34.6 314 115-485 36-381 (460)
110 KOG2563 Permease of the major 99.8 2.8E-18 6.1E-23 159.0 23.3 377 48-512 38-451 (480)
111 PF01306 LacY_symp: LacY proto 99.8 1.5E-17 3.1E-22 157.4 28.1 347 115-515 34-405 (412)
112 PRK15462 dipeptide/tripeptide 99.8 3.3E-16 7.1E-21 153.8 36.0 351 114-485 35-434 (493)
113 COG2270 Permeases of the major 99.8 4.5E-16 9.7E-21 143.8 27.0 345 125-517 56-435 (438)
114 TIGR01272 gluP glucose/galacto 99.8 7.9E-16 1.7E-20 144.7 26.4 253 177-485 6-284 (310)
115 KOG2325 Predicted transporter/ 99.7 1.5E-15 3.2E-20 145.5 15.5 148 118-270 65-234 (488)
116 PF03209 PUCC: PUCC protein; 99.6 9.3E-13 2E-17 122.5 31.0 314 114-483 5-355 (403)
117 COG3104 PTR2 Dipeptide/tripept 99.6 2E-13 4.4E-18 129.4 25.1 380 116-509 53-485 (498)
118 PRK10642 proline/glycine betai 99.6 1.4E-14 2.9E-19 146.3 17.7 170 115-289 277-458 (490)
119 KOG3626 Organic anion transpor 99.6 1E-13 2.2E-18 138.4 22.1 343 113-485 121-643 (735)
120 PF03137 OATP: Organic Anion T 99.6 1.2E-16 2.5E-21 159.7 -0.3 352 110-485 24-508 (539)
121 TIGR00880 2_A_01_02 Multidrug 99.6 1.1E-14 2.4E-19 120.5 9.4 135 132-267 3-140 (141)
122 PF03092 BT1: BT1 family; Int 99.5 6.8E-13 1.5E-17 130.4 20.4 363 113-516 14-418 (433)
123 KOG2816 Predicted transporter 99.5 1.6E-11 3.4E-16 119.8 26.2 302 135-485 70-386 (463)
124 TIGR01299 synapt_SV2 synaptic 99.5 3.6E-13 7.9E-18 139.0 15.4 140 128-269 596-737 (742)
125 PRK09528 lacY galactoside perm 99.5 2.3E-13 5E-18 135.0 13.6 144 125-269 260-407 (420)
126 PF01770 Folate_carrier: Reduc 99.5 3.5E-11 7.5E-16 113.6 26.3 347 114-479 29-390 (412)
127 TIGR00889 2A0110 nucleoside tr 99.4 1.5E-12 3.2E-17 128.5 12.0 143 126-269 250-406 (418)
128 PRK15011 sugar efflux transpor 99.4 1.4E-11 3E-16 121.0 16.9 148 114-267 242-392 (393)
129 TIGR00890 2A0111 Oxalate/Forma 99.3 1.9E-11 4.2E-16 119.5 14.7 142 113-258 229-375 (377)
130 cd06174 MFS The Major Facilita 99.3 2.1E-11 4.5E-16 117.9 14.7 144 113-260 199-347 (352)
131 PRK11551 putative 3-hydroxyphe 99.3 1.6E-11 3.5E-16 121.3 14.0 142 113-258 244-389 (406)
132 PRK09874 drug efflux system pr 99.3 4.2E-11 9E-16 118.6 16.4 137 128-265 259-398 (408)
133 PRK10489 enterobactin exporter 99.3 7.2E-11 1.6E-15 117.0 18.1 153 113-269 247-403 (417)
134 KOG3098 Uncharacterized conser 99.3 3.6E-09 7.9E-14 101.8 28.8 305 133-485 56-408 (461)
135 TIGR00899 2A0120 sugar efflux 99.3 6.5E-11 1.4E-15 115.7 17.2 147 114-266 225-374 (375)
136 PF05631 DUF791: Protein of un 99.3 1.1E-09 2.4E-14 100.7 22.5 149 115-268 60-219 (354)
137 TIGR00902 2A0127 phenyl propri 99.3 1.3E-10 2.8E-15 113.6 17.4 140 113-258 229-372 (382)
138 PRK05122 major facilitator sup 99.3 6.3E-11 1.4E-15 116.8 13.3 137 129-266 251-390 (399)
139 TIGR00892 2A0113 monocarboxyla 99.2 4.8E-11 1E-15 119.2 12.1 143 113-258 265-414 (455)
140 PRK12382 putative transporter; 99.2 1.2E-10 2.7E-15 114.4 14.8 136 129-265 251-389 (392)
141 TIGR00879 SP MFS transporter, 99.2 9.3E-11 2E-15 118.7 13.7 153 113-269 308-474 (481)
142 PRK03545 putative arabinose tr 99.2 3.1E-10 6.7E-15 111.4 16.7 147 114-266 231-381 (390)
143 PRK03893 putative sialic acid 99.2 2.1E-10 4.6E-15 116.6 13.4 140 113-256 299-444 (496)
144 PRK09705 cynX putative cyanate 99.2 6.7E-10 1.5E-14 109.0 16.3 152 113-270 229-386 (393)
145 TIGR00893 2A0114 d-galactonate 99.2 5.7E-10 1.2E-14 109.9 16.0 143 114-261 241-395 (399)
146 PRK10077 xylE D-xylose transpo 99.2 4.4E-10 9.6E-15 113.7 15.3 153 113-269 295-461 (479)
147 KOG3762 Predicted transporter 99.2 3.7E-09 8E-14 101.0 19.4 170 335-508 366-544 (618)
148 TIGR00900 2A0121 H+ Antiporter 99.2 1.4E-09 2.9E-14 105.9 17.0 156 354-510 13-178 (365)
149 TIGR00883 2A0106 metabolite-pr 99.2 1.6E-10 3.4E-15 113.8 10.3 137 115-255 246-391 (394)
150 PRK10054 putative transporter; 99.1 2.8E-09 6E-14 104.6 18.7 164 346-513 13-185 (395)
151 PRK09952 shikimate transporter 99.1 1.6E-09 3.5E-14 107.8 17.3 149 115-268 277-435 (438)
152 TIGR00891 2A0112 putative sial 99.1 2.2E-09 4.7E-14 106.1 18.1 137 374-514 49-192 (405)
153 PF11700 ATG22: Vacuole efflux 99.1 2E-09 4.3E-14 106.5 17.4 149 114-267 307-469 (477)
154 TIGR00897 2A0118 polyol permea 99.1 1.3E-09 2.7E-14 107.5 16.0 143 113-261 246-397 (402)
155 PRK03633 putative MFS family t 99.1 1.3E-09 2.8E-14 106.7 15.7 139 113-258 224-365 (381)
156 TIGR00882 2A0105 oligosacchari 99.1 2E-09 4.4E-14 105.9 16.9 137 125-262 252-392 (396)
157 PF05977 MFS_3: Transmembrane 99.1 2.6E-09 5.6E-14 106.9 17.7 142 113-258 242-387 (524)
158 PRK09556 uhpT sugar phosphate 99.1 9.2E-10 2E-14 110.7 14.6 141 114-258 284-442 (467)
159 TIGR00895 2A0115 benzoate tran 99.1 9.7E-10 2.1E-14 108.3 14.6 124 113-240 274-397 (398)
160 PF06813 Nodulin-like: Nodulin 99.1 5.4E-10 1.2E-14 99.4 11.3 151 113-269 26-185 (250)
161 PF07690 MFS_1: Major Facilita 99.1 4.4E-09 9.5E-14 101.8 18.4 134 374-511 34-173 (352)
162 PRK03699 putative transporter; 99.1 9.4E-10 2E-14 108.1 13.4 146 115-266 232-380 (394)
163 TIGR02332 HpaX 4-hydroxyphenyl 99.1 6.8E-09 1.5E-13 102.5 19.5 136 375-514 46-193 (412)
164 PF01306 LacY_symp: LacY proto 99.1 4.4E-09 9.5E-14 100.2 16.5 144 125-269 257-404 (412)
165 PRK11010 ampG muropeptide tran 99.1 2.2E-08 4.7E-13 101.0 22.5 150 113-267 247-404 (491)
166 PRK10213 nepI ribonucleoside t 99.1 1.4E-08 3.1E-13 99.6 20.5 134 376-513 59-198 (394)
167 PRK10473 multidrug efflux syst 99.1 8E-09 1.7E-13 101.6 18.7 135 377-515 43-183 (392)
168 PRK11128 putative 3-phenylprop 99.1 5.6E-09 1.2E-13 102.2 17.4 135 117-257 233-371 (382)
169 TIGR00710 efflux_Bcr_CflA drug 99.1 7.6E-09 1.6E-13 101.5 18.1 137 375-515 43-185 (385)
170 TIGR00887 2A0109 phosphate:H+ 99.1 6.9E-09 1.5E-13 105.4 18.2 138 376-513 60-227 (502)
171 KOG0569 Permease of the major 99.1 3.2E-09 7E-14 103.2 14.8 152 113-269 294-458 (485)
172 TIGR00792 gph sugar (Glycoside 99.1 1.7E-08 3.7E-13 100.9 20.6 116 125-241 255-378 (437)
173 PRK11195 lysophospholipid tran 99.1 9.9E-09 2.2E-13 100.6 18.3 133 375-514 41-177 (393)
174 TIGR00898 2A0119 cation transp 99.1 5.1E-09 1.1E-13 106.7 16.6 134 134-269 362-498 (505)
175 PRK11273 glpT sn-glycerol-3-ph 99.0 9.5E-09 2.1E-13 102.9 18.1 144 115-262 280-432 (452)
176 PRK11646 multidrug resistance 99.0 2.6E-08 5.7E-13 97.9 20.8 163 347-513 17-188 (400)
177 PLN00028 nitrate transmembrane 99.0 1.8E-08 3.9E-13 101.4 19.5 130 378-512 77-220 (476)
178 PRK11663 regulatory protein Uh 99.0 9.6E-09 2.1E-13 102.3 17.0 148 115-267 270-426 (434)
179 PRK12307 putative sialic acid 99.0 7.4E-09 1.6E-13 103.1 16.1 125 113-241 255-381 (426)
180 PRK08633 2-acyl-glycerophospho 99.0 4.6E-09 1E-13 118.2 16.1 140 114-257 258-402 (1146)
181 TIGR00924 yjdL_sub1_fam amino 99.0 6.8E-09 1.5E-13 104.1 15.3 134 374-511 50-192 (475)
182 PRK15462 dipeptide/tripeptide 99.0 7.2E-09 1.6E-13 102.4 14.7 127 378-507 51-185 (493)
183 PRK10091 MFS transport protein 99.0 2.6E-08 5.6E-13 97.5 18.6 136 375-514 41-182 (382)
184 TIGR00880 2_A_01_02 Multidrug 99.0 1.3E-08 2.8E-13 83.8 14.1 124 382-509 8-136 (141)
185 PRK10504 putative transporter; 99.0 9.6E-09 2.1E-13 103.7 15.4 120 118-241 291-413 (471)
186 COG2270 Permeases of the major 99.0 6E-09 1.3E-13 97.2 12.5 148 116-268 280-431 (438)
187 COG2271 UhpC Sugar phosphate p 99.0 7.6E-09 1.6E-13 96.4 13.1 133 374-510 66-205 (448)
188 TIGR00712 glpT glycerol-3-phos 99.0 8.1E-09 1.8E-13 103.0 14.5 149 116-268 279-436 (438)
189 COG2814 AraJ Arabinose efflux 99.0 3.8E-08 8.1E-13 92.9 17.7 145 113-263 236-384 (394)
190 PF06963 FPN1: Ferroportin1 (F 99.0 1.2E-05 2.7E-10 77.9 35.4 334 130-485 41-412 (432)
191 TIGR02718 sider_RhtX_FptX side 99.0 2.2E-08 4.7E-13 98.4 17.0 141 114-258 233-384 (390)
192 PRK15402 multidrug efflux syst 99.0 2.8E-08 6.1E-13 98.2 17.7 139 115-258 242-388 (406)
193 TIGR00711 efflux_EmrB drug res 99.0 2E-08 4.3E-13 101.9 16.9 153 357-513 19-180 (485)
194 PRK15075 citrate-proton sympor 99.0 1.3E-08 2.8E-13 101.4 15.1 125 113-241 262-392 (434)
195 PRK15403 multidrug efflux syst 99.0 6.5E-08 1.4E-12 95.5 19.9 135 377-515 56-196 (413)
196 PRK14995 methyl viologen resis 99.0 5.5E-08 1.2E-12 98.5 19.6 153 357-513 23-185 (495)
197 PRK09848 glucuronide transport 99.0 8.3E-08 1.8E-12 96.1 20.7 123 115-241 255-386 (448)
198 PRK15034 nitrate/nitrite trans 98.9 1.6E-07 3.4E-12 92.0 21.2 109 374-483 72-181 (462)
199 PF03825 Nuc_H_symport: Nucleo 98.9 9.4E-08 2E-12 92.9 19.6 149 116-268 234-398 (400)
200 PRK11043 putative transporter; 98.9 1.2E-07 2.6E-12 93.5 20.4 135 375-513 44-183 (401)
201 PRK10429 melibiose:sodium symp 98.9 2.7E-07 5.8E-12 92.9 22.9 116 125-241 264-391 (473)
202 PRK11102 bicyclomycin/multidru 98.9 3.3E-08 7.1E-13 96.7 15.9 135 375-513 29-169 (377)
203 TIGR00885 fucP L-fucose:H+ sym 98.9 1E-07 2.2E-12 93.9 19.3 111 374-485 40-150 (410)
204 PRK10406 alpha-ketoglutarate t 98.9 3.4E-08 7.3E-13 98.4 16.1 148 115-267 270-425 (432)
205 PRK11652 emrD multidrug resist 98.9 1.1E-07 2.3E-12 93.7 18.8 136 375-514 46-187 (394)
206 TIGR00881 2A0104 phosphoglycer 98.9 2.4E-08 5.1E-13 97.7 14.1 129 115-247 243-379 (379)
207 PRK06814 acylglycerophosphoeth 98.9 3.2E-08 7E-13 111.0 16.7 139 115-257 252-414 (1140)
208 PF02487 CLN3: CLN3 protein; 98.9 5.8E-07 1.3E-11 85.4 22.3 134 129-268 61-198 (402)
209 KOG2504 Monocarboxylate transp 98.9 7.6E-09 1.7E-13 103.1 10.0 149 113-266 322-476 (509)
210 TIGR00903 2A0129 major facilit 98.9 1.3E-07 2.9E-12 91.4 18.0 136 374-514 28-169 (368)
211 TIGR00926 2A1704 Peptide:H+ sy 98.9 1.5E-06 3.4E-11 89.2 25.6 143 116-261 15-178 (654)
212 PRK10207 dipeptide/tripeptide 98.9 4.1E-08 8.9E-13 98.5 14.0 125 384-511 62-194 (489)
213 TIGR00894 2A0114euk Na(+)-depe 98.8 2.7E-08 5.8E-13 100.2 12.8 133 376-510 80-218 (465)
214 TIGR00901 2A0125 AmpG-related 98.8 2.3E-08 5E-13 96.9 11.7 111 113-227 233-355 (356)
215 PRK11902 ampG muropeptide tran 98.8 1.9E-07 4.2E-12 92.0 18.0 137 114-258 235-383 (402)
216 KOG3810 Micronutrient transpor 98.8 1E-07 2.2E-12 86.1 13.8 347 133-510 48-420 (433)
217 TIGR00769 AAA ADP/ATP carrier 98.8 0.00011 2.3E-09 72.4 36.0 116 125-241 41-189 (472)
218 TIGR00886 2A0108 nitrite extru 98.8 2.9E-07 6.2E-12 89.7 18.2 106 375-485 40-146 (366)
219 KOG3764 Vesicular amine transp 98.8 2.3E-08 5E-13 92.1 9.5 137 372-512 106-248 (464)
220 TIGR01272 gluP glucose/galacto 98.8 1E-07 2.3E-12 89.8 14.4 129 118-253 172-303 (310)
221 KOG1330 Sugar transporter/spin 98.8 5.3E-09 1.2E-13 98.4 5.5 138 374-515 70-214 (493)
222 PRK09584 tppB putative tripept 98.8 2.4E-07 5.1E-12 93.6 17.3 116 387-505 72-195 (500)
223 KOG0253 Synaptic vesicle trans 98.8 6.7E-08 1.4E-12 88.1 11.2 124 137-266 391-519 (528)
224 TIGR00896 CynX cyanate transpo 98.8 6.7E-08 1.4E-12 93.6 11.9 124 113-241 221-346 (355)
225 COG2223 NarK Nitrate/nitrite t 98.7 4.9E-07 1.1E-11 84.6 16.2 133 373-508 50-190 (417)
226 COG2211 MelB Na+/melibiose sym 98.7 4.9E-06 1.1E-10 80.5 23.4 116 125-241 270-394 (467)
227 PRK10133 L-fucose transporter; 98.7 1E-06 2.2E-11 87.6 19.5 110 374-485 63-173 (438)
228 TIGR00806 rfc RFC reduced fola 98.7 1.3E-06 2.7E-11 84.4 19.0 134 375-513 65-205 (511)
229 KOG2615 Permease of the major 98.7 6.4E-08 1.4E-12 88.7 9.7 106 375-485 71-176 (451)
230 PF13347 MFS_2: MFS/sugar tran 98.7 3.5E-07 7.6E-12 91.0 15.9 114 127-241 260-382 (428)
231 PTZ00207 hypothetical protein; 98.7 6.6E-07 1.4E-11 90.2 17.7 118 388-507 77-201 (591)
232 PRK09669 putative symporter Ya 98.7 1E-06 2.2E-11 88.2 19.1 113 128-241 265-386 (444)
233 TIGR00805 oat sodium-independe 98.7 1.2E-07 2.6E-12 98.0 12.6 139 376-514 72-284 (633)
234 PF06609 TRI12: Fungal trichot 98.7 4.2E-07 9.1E-12 91.1 15.5 127 376-507 82-213 (599)
235 KOG0637 Sucrose transporter an 98.7 2.4E-07 5.2E-12 87.2 12.6 128 113-244 56-205 (498)
236 COG0477 ProP Permeases of the 98.7 3.1E-07 6.8E-12 87.0 14.1 140 113-256 26-176 (338)
237 KOG4332 Predicted sugar transp 98.7 1E-06 2.2E-11 76.8 15.3 336 114-507 62-427 (454)
238 KOG4686 Predicted sugar transp 98.7 1.7E-07 3.8E-12 82.2 10.1 122 114-241 290-412 (459)
239 KOG0255 Synaptic vesicle trans 98.7 2.8E-07 6.1E-12 94.2 13.6 133 376-513 122-257 (521)
240 TIGR01301 GPH_sucrose GPH fami 98.7 2.7E-06 5.8E-11 84.0 19.6 162 353-514 17-222 (477)
241 PF03209 PUCC: PUCC protein; 98.6 7.2E-06 1.6E-10 77.2 20.0 143 113-258 233-391 (403)
242 KOG2532 Permease of the major 98.6 1.2E-06 2.6E-11 86.4 15.4 133 376-510 77-215 (466)
243 COG2807 CynX Cyanate permease 98.6 1.1E-06 2.4E-11 80.6 13.2 148 113-264 232-384 (395)
244 TIGR00939 2a57 Equilibrative N 98.6 4.9E-05 1.1E-09 74.6 25.6 55 431-485 374-428 (437)
245 KOG0254 Predicted transporter 98.5 1.4E-06 2.9E-11 88.8 13.5 135 375-513 92-232 (513)
246 TIGR00788 fbt folate/biopterin 98.5 4.6E-07 9.9E-12 90.7 9.8 121 117-241 281-411 (468)
247 PF13000 Acatn: Acetyl-coenzym 98.5 5.2E-05 1.1E-09 72.9 22.2 48 434-481 410-457 (544)
248 PRK11462 putative transporter; 98.5 2.2E-05 4.7E-10 78.7 20.4 114 127-241 263-385 (460)
249 KOG2533 Permease of the major 98.5 5.8E-06 1.3E-10 81.9 15.7 137 373-513 82-230 (495)
250 COG0738 FucP Fucose permease [ 98.4 1.8E-05 4E-10 73.9 15.9 110 375-485 51-160 (422)
251 COG3104 PTR2 Dipeptide/tripept 98.3 4.3E-06 9.4E-11 80.3 10.9 122 387-511 76-206 (498)
252 KOG1237 H+/oligopeptide sympor 98.3 0.00012 2.6E-09 74.0 21.6 143 113-258 62-238 (571)
253 KOG0252 Inorganic phosphate tr 98.3 1.1E-06 2.3E-11 83.0 6.4 125 140-269 361-501 (538)
254 KOG3574 Acetyl-CoA transporter 98.3 8.6E-05 1.9E-09 68.5 17.6 118 113-236 54-188 (510)
255 PF06779 DUF1228: Protein of u 98.3 3.4E-06 7.3E-11 60.5 6.8 69 113-185 16-84 (85)
256 PF00083 Sugar_tr: Sugar (and 98.1 2.6E-08 5.6E-13 100.0 -9.0 137 376-513 50-194 (451)
257 PF06813 Nodulin-like: Nodulin 98.1 3.1E-05 6.7E-10 69.2 11.5 104 380-485 45-151 (250)
258 PF05978 UNC-93: Ion channel r 98.1 2.5E-05 5.4E-10 64.3 9.4 107 132-240 42-148 (156)
259 KOG3762 Predicted transporter 98.1 2.5E-06 5.5E-11 82.1 3.9 135 125-260 404-542 (618)
260 KOG2325 Predicted transporter/ 98.1 6.7E-05 1.4E-09 73.1 13.5 139 374-513 73-232 (488)
261 PF03219 TLC: TLC ATP/ADP tran 98.1 0.0082 1.8E-07 59.7 27.8 155 48-241 17-204 (491)
262 KOG2816 Predicted transporter 97.9 0.00045 9.7E-09 68.2 15.2 123 114-241 267-390 (463)
263 COG3202 ATP/ADP translocase [E 97.9 0.033 7.1E-07 54.1 30.2 128 114-242 48-209 (509)
264 PF00854 PTR2: POT family; In 97.7 0.00078 1.7E-08 65.6 13.9 103 159-261 2-119 (372)
265 PF02487 CLN3: CLN3 protein; 97.7 0.002 4.4E-08 61.7 15.3 114 125-241 279-395 (402)
266 PF12832 MFS_1_like: MFS_1 lik 97.6 0.00029 6.2E-09 50.3 7.0 52 113-168 24-75 (77)
267 KOG2563 Permease of the major 97.6 0.0048 1E-07 59.0 16.3 109 376-484 83-195 (480)
268 PF05631 DUF791: Protein of un 97.5 0.015 3.3E-07 54.3 18.5 137 374-515 71-221 (354)
269 PF05978 UNC-93: Ion channel r 97.4 0.0048 1E-07 50.9 12.0 98 383-485 48-145 (156)
270 PF07672 MFS_Mycoplasma: Mycop 97.3 0.0087 1.9E-07 53.0 13.6 51 213-263 2-60 (267)
271 PF06963 FPN1: Ferroportin1 (F 97.3 0.0065 1.4E-07 59.3 13.7 120 118-241 287-416 (432)
272 TIGR00926 2A1704 Peptide:H+ sy 97.2 0.011 2.4E-07 61.3 15.4 122 386-507 37-178 (654)
273 KOG1479 Nucleoside transporter 97.1 0.042 9.1E-07 52.5 17.2 55 431-485 345-399 (406)
274 TIGR00769 AAA ADP/ATP carrier 97.1 0.096 2.1E-06 52.0 19.8 98 387-485 59-185 (472)
275 PF03092 BT1: BT1 family; Int 97.0 0.012 2.6E-07 58.3 13.5 141 371-511 21-175 (433)
276 PF01733 Nucleoside_tran: Nucl 96.8 0.00033 7.1E-09 66.0 0.5 106 378-484 188-303 (309)
277 PRK03612 spermidine synthase; 96.8 0.064 1.4E-06 54.3 16.2 140 118-263 44-195 (521)
278 KOG3626 Organic anion transpor 96.4 0.018 3.9E-07 59.2 9.3 135 383-517 143-349 (735)
279 KOG3098 Uncharacterized conser 96.2 0.2 4.4E-06 49.2 15.3 112 128-240 280-411 (461)
280 PF01770 Folate_carrier: Reduc 96.2 0.18 3.9E-06 48.7 14.7 123 386-513 55-184 (412)
281 PF03137 OATP: Organic Anion T 96.1 0.00094 2E-08 67.7 -1.6 136 378-513 44-252 (539)
282 COG0477 ProP Permeases of the 95.8 0.28 6.1E-06 45.7 14.5 109 375-485 42-152 (338)
283 KOG3880 Predicted small molecu 95.7 0.053 1.1E-06 49.2 7.7 125 137-268 72-202 (409)
284 PF12832 MFS_1_like: MFS_1 lik 95.5 0.18 3.9E-06 35.9 8.8 60 352-411 12-74 (77)
285 PRK03612 spermidine synthase; 95.5 1.3 2.8E-05 45.1 18.1 51 434-485 115-165 (521)
286 PF00854 PTR2: POT family; In 94.8 0.21 4.5E-06 48.7 10.0 107 403-509 2-121 (372)
287 KOG2601 Iron transporter [Inor 94.3 1.2 2.6E-05 41.9 12.7 52 434-485 391-442 (503)
288 TIGR00939 2a57 Equilibrative N 94.1 1.8 3.8E-05 43.0 14.5 110 128-239 308-430 (437)
289 PF03219 TLC: TLC ATP/ADP tran 93.7 8.5 0.00018 38.8 21.1 101 385-485 72-200 (491)
290 KOG3880 Predicted small molecu 92.6 0.54 1.2E-05 43.0 7.4 116 126-241 287-402 (409)
291 KOG3574 Acetyl-CoA transporter 91.7 4.3 9.3E-05 38.7 12.2 96 390-485 81-189 (510)
292 KOG3097 Predicted membrane pro 91.5 12 0.00026 35.0 21.1 96 139-236 70-180 (390)
293 KOG0637 Sucrose transporter an 90.1 0.54 1.2E-05 45.6 5.1 103 383-485 78-199 (498)
294 KOG1479 Nucleoside transporter 89.9 2.8 6E-05 40.4 9.7 112 126-239 281-401 (406)
295 KOG2881 Predicted membrane pro 89.6 9.2 0.0002 34.0 11.6 35 383-417 251-285 (294)
296 COG5336 Uncharacterized protei 85.3 2.3 4.9E-05 31.8 4.7 45 127-171 42-86 (116)
297 COG4262 Predicted spermidine s 85.2 23 0.0005 33.4 12.1 83 125-208 41-132 (508)
298 PF01733 Nucleoside_tran: Nucl 84.5 0.33 7.1E-06 45.8 0.2 109 131-239 186-306 (309)
299 PF06779 DUF1228: Protein of u 82.4 7.8 0.00017 28.1 6.5 52 375-426 30-81 (85)
300 KOG4332 Predicted sugar transp 81.6 6.9 0.00015 35.3 7.2 119 384-507 84-216 (454)
301 COG3202 ATP/ADP translocase [E 81.0 63 0.0014 32.3 20.1 102 384-485 74-204 (509)
302 PF07672 MFS_Mycoplasma: Mycop 78.7 45 0.00098 30.2 11.3 104 128-232 142-254 (267)
303 PF06912 DUF1275: Protein of u 73.2 64 0.0014 28.2 13.4 17 134-150 53-69 (209)
304 KOG1237 H+/oligopeptide sympor 67.4 65 0.0014 33.4 11.1 124 384-507 85-241 (571)
305 PF09527 ATPase_gene1: Putativ 64.9 18 0.00038 23.6 4.4 38 134-171 7-44 (55)
306 KOG3810 Micronutrient transpor 64.8 23 0.00049 33.6 6.5 116 394-514 64-186 (433)
307 TIGR01666 YCCS hypothetical me 61.6 1.8E+02 0.0038 31.1 13.1 111 147-270 43-159 (704)
308 TIGR02230 ATPase_gene1 F0F1-AT 60.8 29 0.00062 26.1 5.3 34 138-171 53-86 (100)
309 COG5336 Uncharacterized protei 60.8 35 0.00075 25.8 5.5 30 385-414 55-85 (116)
310 PF12805 FUSC-like: FUSC-like 60.5 1.2E+02 0.0026 28.1 10.7 96 162-270 3-101 (284)
311 TIGR01667 YCCS_YHJK integral m 57.6 1.9E+02 0.0042 30.9 12.7 112 145-270 41-159 (701)
312 PF03547 Mem_trans: Membrane t 56.8 2E+02 0.0043 28.0 14.0 18 224-241 102-119 (385)
313 PF11947 DUF3464: Protein of u 55.9 66 0.0014 26.4 7.0 36 445-480 110-145 (153)
314 TIGR00844 c_cpa1 na(+)/h(+) an 52.3 3.4E+02 0.0073 29.4 19.9 23 131-153 13-35 (810)
315 PF13000 Acatn: Acetyl-coenzym 51.5 1.6E+02 0.0035 29.7 10.1 48 183-230 407-454 (544)
316 PF06027 DUF914: Eukaryotic pr 50.7 2.3E+02 0.005 27.0 10.8 14 388-401 183-196 (334)
317 PRK10263 DNA translocase FtsK; 45.2 5.4E+02 0.012 29.8 13.7 19 383-401 63-81 (1355)
318 PF10785 NADH-u_ox-rdase: NADH 43.2 1.3E+02 0.0028 22.0 6.3 39 141-180 32-77 (86)
319 PF04346 EutH: Ethanolamine ut 40.4 3.4E+02 0.0073 26.0 16.9 70 127-198 47-119 (354)
320 KOG3097 Predicted membrane pro 38.8 2.2E+02 0.0049 27.0 8.4 68 385-457 71-138 (390)
321 COG4769 Predicted membrane pro 38.8 31 0.00067 28.3 2.7 52 135-193 81-132 (181)
322 PF08611 DUF1774: Fungal prote 37.2 1.8E+02 0.0038 21.8 6.2 43 464-507 28-70 (97)
323 KOG4830 Predicted sugar transp 35.6 62 0.0013 29.3 4.2 78 406-485 272-351 (412)
324 PF03741 TerC: Integral membra 34.4 3E+02 0.0064 23.6 12.6 59 197-255 12-71 (183)
325 PF11947 DUF3464: Protein of u 34.3 1.1E+02 0.0023 25.3 5.0 50 180-232 96-145 (153)
326 TIGR02230 ATPase_gene1 F0F1-AT 34.2 2E+02 0.0044 21.7 6.9 27 385-411 56-82 (100)
327 PF03547 Mem_trans: Membrane t 33.9 4.3E+02 0.0093 25.7 10.5 18 383-400 6-23 (385)
328 PRK10263 DNA translocase FtsK; 33.1 3.5E+02 0.0075 31.1 10.1 7 115-121 60-66 (1355)
329 PF07760 DUF1616: Protein of u 32.3 2.6E+02 0.0055 26.0 8.1 57 184-241 22-78 (287)
330 PF07556 DUF1538: Protein of u 31.4 3.6E+02 0.0079 23.7 8.3 86 179-266 60-147 (212)
331 PF06123 CreD: Inner membrane 31.2 5.4E+02 0.012 25.6 11.7 77 386-470 305-386 (430)
332 PF10183 ESSS: ESSS subunit of 30.3 64 0.0014 24.6 3.1 28 242-269 58-85 (105)
333 PF02694 UPF0060: Uncharacteri 30.3 1.2E+02 0.0026 23.0 4.4 52 127-179 54-105 (107)
334 PRK11875 psbT photosystem II r 30.0 1E+02 0.0022 17.2 2.9 11 260-270 18-28 (31)
335 PF02990 EMP70: Endomembrane p 30.0 5.3E+02 0.011 26.5 10.6 24 378-401 303-326 (521)
336 TIGR02840 spore_YtaF putative 29.5 3.9E+02 0.0084 23.4 14.8 25 374-398 156-180 (206)
337 PRK11715 inner membrane protei 29.3 3.6E+02 0.0077 26.9 8.7 45 214-258 354-398 (436)
338 PF01405 PsbT: Photosystem II 28.5 1.1E+02 0.0024 16.9 2.8 11 260-270 18-28 (29)
339 PRK02237 hypothetical protein; 27.3 1.9E+02 0.0042 22.0 5.0 51 128-179 57-107 (109)
340 PF06123 CreD: Inner membrane 27.0 4.5E+02 0.0097 26.2 8.9 26 155-180 323-348 (430)
341 CHL00031 psbT photosystem II p 27.0 1.1E+02 0.0024 17.4 2.7 11 260-270 18-28 (33)
342 PRK02935 hypothetical protein; 26.6 2.9E+02 0.0062 20.9 5.9 12 398-409 8-19 (110)
343 PF13536 EmrE: Multidrug resis 25.7 3.1E+02 0.0066 20.9 8.0 22 397-420 84-105 (113)
344 COG1288 Predicted membrane pro 25.6 6.7E+02 0.015 24.9 9.9 17 242-258 217-233 (481)
345 PF01528 Herpes_glycop: Herpes 25.5 1.5E+02 0.0032 28.7 5.3 11 199-209 252-262 (374)
346 COG1268 BioY Uncharacterized c 25.4 2.1E+02 0.0045 24.5 5.6 24 133-157 88-111 (184)
347 PF02535 Zip: ZIP Zinc transpo 25.1 5.7E+02 0.012 23.9 12.5 34 180-213 259-293 (317)
348 PF13937 DUF4212: Domain of un 24.9 2.4E+02 0.0053 20.3 5.0 43 220-262 16-63 (81)
349 PF03606 DcuC: C4-dicarboxylat 24.8 6E+02 0.013 25.6 9.8 14 393-406 105-118 (465)
350 PF04281 Tom22: Mitochondrial 24.3 2.8E+02 0.006 22.4 5.8 52 453-508 59-110 (137)
351 PF08611 DUF1774: Fungal prote 24.2 3.1E+02 0.0067 20.5 6.0 40 215-258 27-67 (97)
352 PF11299 DUF3100: Protein of u 23.5 33 0.00072 30.1 0.5 102 113-240 128-229 (241)
353 PF02632 BioY: BioY family; I 23.4 2.6E+02 0.0056 22.9 5.7 26 133-159 59-84 (148)
354 PF11833 DUF3353: Protein of u 22.8 2.8E+02 0.0062 23.9 6.0 30 212-241 136-165 (194)
355 PF13829 DUF4191: Domain of un 22.8 2.4E+02 0.0051 25.0 5.5 69 220-289 28-98 (224)
356 PRK11715 inner membrane protei 21.9 8.1E+02 0.017 24.5 11.9 77 386-470 311-392 (436)
357 PRK11469 hypothetical protein; 21.1 5.4E+02 0.012 22.1 14.4 33 387-419 150-182 (188)
358 PF06645 SPC12: Microsomal sig 20.7 3.2E+02 0.0069 19.4 6.6 48 220-270 11-58 (76)
359 PRK03818 putative transporter; 20.3 8.6E+02 0.019 25.2 10.0 82 126-209 434-516 (552)
No 1
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.3e-45 Score=372.81 Aligned_cols=455 Identities=37% Similarity=0.691 Sum_probs=373.0
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCC--C------------C--CCCCCcccCC----------
Q 009563 47 GEFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQ--G------------C--DPGEKTVCGL---------- 100 (532)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~--~------------~--~~~~~~~~~~---------- 100 (532)
|+++++|+..++++++..+..+++.....+....|||.|... + + +++....|..
T Consensus 1 g~~g~~q~~~~~~~~~~~~~~~~~~~~~~f~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (505)
T TIGR00898 1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSSRCELNLTLPRLPDGRPESCLRFMVDQWANPS 80 (505)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCCCcccCChHhHhceeccCCCCCCCCCCccccccchhhhc
Confidence 468999999999999999999999999999999999999711 0 0 0000011211
Q ss_pred -------------------CCCcceecCC-CCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHH
Q 009563 101 -------------------EPGSWAWTGG-DGSSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGS 160 (532)
Q Consensus 101 -------------------~~~~~~~~~~-~~~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~ 160 (532)
+...|.|+.+ ..|.+.+|||+.|+++.+.+++.+++.++..++++++|+++|| +|||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-~Grr~~ 159 (505)
T TIGR00898 81 LLGCEPLKLSDLGLAATEPCLDGWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-FGRKKV 159 (505)
T ss_pred ccccccchhcccCCCCCCCCCCCcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHH
Confidence 2235888864 4789999999988889999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009563 161 LTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF 240 (532)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l 240 (532)
+.++.++.+++.++++++++++.+++.|++.|++.+...+....++.|++|+++|+++.++...+..+|.++++.+++.+
T Consensus 160 ~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 239 (505)
T TIGR00898 160 LLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI 239 (505)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred hchHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchh
Q 009563 241 QTWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYK 320 (532)
Q Consensus 241 ~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (532)
.+||+.|++.+++.++.. +..+++||+|+|+..+++.+++.+.+++..+.|+...+++...... ++
T Consensus 240 ~~wr~~~~~~~i~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~---~~---------- 305 (505)
T TIGR00898 240 PDWRWLQLAVSLPTFLFF-LLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSL---EK---------- 305 (505)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhh---hh----------
Confidence 799999999998888776 4557899999999999999999998888877765433221110000 00
Q ss_pred hhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 009563 321 EELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVVNLQTNLYLNVLVNAVAEMPAFTITAVLLDKLG 400 (532)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g 400 (532)
. ......+.+++++++++.++...+.....++.....+|....+.+..+.+.+......++..+++.++.+++.||+|
T Consensus 306 -~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~g 383 (505)
T TIGR00898 306 -D-LSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLG 383 (505)
T ss_pred -h-hhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 0 00001134678899999888888888778888888888888888877777777777778888999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHH
Q 009563 401 RKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAIL 480 (532)
Q Consensus 401 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i 480 (532)
||+.+.++.++.+++++++.+......+ ...+..++.+++....++..+.+..|.+|++.|+++.|+.+....+|+++
T Consensus 384 rr~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i 461 (505)
T TIGR00898 384 RRYTMAASLLLAGVALLLLLFVPVDLYF--LRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSII 461 (505)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCchH--HHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHH
Confidence 9999999988888888777766544322 34445556667777788889999999999999999999999999999999
Q ss_pred HHHHHH---hhhhhHHHHHHHHHHHHHHHHhhccCCCCCChhh
Q 009563 481 APFVVV---LGGWLPFAVFAACGIIGGLFAFYLPETLNKPLYD 520 (532)
Q Consensus 481 ~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 520 (532)
+|.+.. .+...++.+++++.+++.++.+++||++++++++
T Consensus 462 ~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~~ 504 (505)
T TIGR00898 462 SPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPE 504 (505)
T ss_pred HhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCCC
Confidence 998873 3456678888888888888888899999887754
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=2.9e-44 Score=366.58 Aligned_cols=434 Identities=24% Similarity=0.402 Sum_probs=335.8
Q ss_pred HHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeec
Q 009563 39 DDMLHKYCGEFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQ 118 (532)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 118 (532)
|+.+++. +.++++|.++++++++.+.++++...+++. . |.+.++
T Consensus 153 d~~l~~~--~~~~~~~~l~~i~~l~~~~~g~d~~~is~i--------l--------------------------p~i~~~ 196 (742)
T TIGR01299 153 ELIIQEC--GHGRFQWALFFVLGLALMADGVEVFVVGFV--------L--------------------------PSAEKD 196 (742)
T ss_pred HHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHH
Confidence 4444553 578999999999999999999998877777 5 889999
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhcccc
Q 009563 119 WGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGV 198 (532)
Q Consensus 119 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 198 (532)
+++ +..+.+++.++++++.+++++++|+++|| +|||+++++++++.++++++++++++++.++++|++.|++.|+.
T Consensus 197 ~gl---s~~~~g~l~s~~~lG~iiG~li~G~LsDR-~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~ 272 (742)
T TIGR01299 197 LCI---PDSGKGMLGLIVYLGMMVGAFFWGGLADK-LGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGA 272 (742)
T ss_pred hCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 999 99999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred chhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----------------chHHHHHHHHHHHHHHHHHHh
Q 009563 199 GLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----------------TWRALYIASSIPSILFLLIIL 262 (532)
Q Consensus 199 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----------------~wr~~f~~~~~~~~~~~~~~~ 262 (532)
.+...+++.|++|+++|++.+++...++.+|.++++.++..+. +||+.+++.+++.++.. +..
T Consensus 273 ~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~ 351 (742)
T TIGR01299 273 IPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAI-GAL 351 (742)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHH-HHH
Confidence 9999999999999999999999999999999999887664432 69999998888776655 777
Q ss_pred cccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCc-cccccch---hhhhhh---h-hcCccc-h---hhhh-hhhhcc
Q 009563 263 PFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPD-GVVLMLD---DEQEND---A-SNGKQN-Y---KEEL-ATKEAV 329 (532)
Q Consensus 263 ~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~---~-~~~~~~-~---~~~~-~~~~~~ 329 (532)
+++||||+|+..+++.+++.+.++++++.|.+.... +.....+ ...... + +..... + .... ......
T Consensus 352 ~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (742)
T TIGR01299 352 TFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGI 431 (742)
T ss_pred HHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhH
Confidence 889999999999999999999999987766442211 1100000 000000 0 000000 0 0000 001111
Q ss_pred ccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhccccCc--------------------------------------
Q 009563 330 TGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVVNLQ-------------------------------------- 371 (532)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------- 371 (532)
+..++++|+.+ +++..+...+.++...+.+|++..+++..-
T Consensus 432 ~~~~~~lf~~~-~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (742)
T TIGR01299 432 WGNFLRCFNPE-VREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGE 510 (742)
T ss_pred HHHHHHHcCcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccc
Confidence 22456666554 667777888888888888887766644210
Q ss_pred --------------------------------------------------------------------------------
Q 009563 372 -------------------------------------------------------------------------------- 371 (532)
Q Consensus 372 -------------------------------------------------------------------------------- 371 (532)
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 590 (742)
T TIGR01299 511 YDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGD 590 (742)
T ss_pred cccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCcc
Confidence
Q ss_pred ----chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhh
Q 009563 372 ----TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTY 447 (532)
Q Consensus 372 ----~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (532)
...+....+.+++.+++.+++++++||+|||+++.++.++.+++++++.+..+.. ..++..++.+++.++.+
T Consensus 591 ~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~----~ll~~~~l~g~~~~~~~ 666 (742)
T TIGR01299 591 DEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSES----AMIALLCLFGGLSIAAW 666 (742)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHH----HHHHHHHHHHHHHHHHH
Confidence 0012224455677889999999999999999999999999998888877665432 33444456667777788
Q ss_pred hhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH----HhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCh
Q 009563 448 NLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV----VLGGWLPFAVFAACGIIGGLFAFYLPETLNKPL 518 (532)
Q Consensus 448 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 518 (532)
+...++++|.+|++.|++++|+.++...+|++++|++. ..+...+|++++++.++++++.+++||++++.+
T Consensus 667 ~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~~~~l 741 (742)
T TIGR01299 667 NALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTRGQVL 741 (742)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 88999999999999999999999999999999999887 233456788888888888888888899988754
No 3
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.2e-41 Score=301.80 Aligned_cols=430 Identities=27% Similarity=0.501 Sum_probs=358.4
Q ss_pred HHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceee
Q 009563 38 VDDMLHKYCGEFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVT 117 (532)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 117 (532)
.++..+.. +++++||...+....+++.+.+........ . |.+.+
T Consensus 63 v~ea~~ai--gfgrfq~yl~~~ag~gwmad~m~~m~~s~i--------~--------------------------~~l~~ 106 (528)
T KOG0253|consen 63 VDEAMNAI--GFGRFQWYLFFVAGMGWMADAMEMMLLSLI--------L--------------------------PALDE 106 (528)
T ss_pred ehhhhhhc--CcccchhhHHHHhhhHHHHHHHHHHHHHHH--------H--------------------------HHHHh
Confidence 45555654 699999999999999999999998888888 5 88889
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccc
Q 009563 118 QWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGG 197 (532)
Q Consensus 118 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 197 (532)
.++. +..|.+++......|..+++..+|.++|+ +|||+.+....+..++..++.++++|+.++.+.|.+.|+|.|+
T Consensus 107 ~w~~---s~~q~~llt~~v~~gmllga~~w~l~~d~-~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg 182 (528)
T KOG0253|consen 107 VWGP---SEGQAPLLTLSVFLGMLVGAMVWGLSADT-IGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG 182 (528)
T ss_pred hhch---hhhhhhHHHHHHHhhhhhhhhhhheehhh-hhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC
Confidence 9999 99999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred cchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhh
Q 009563 198 VGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLV 274 (532)
Q Consensus 198 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~ 274 (532)
.|...++-.|..|..+|...+-.. ..+.+|.+....+..... ||||.....+.+..+.+ ...+++|||||++..
T Consensus 183 -~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a-~f~~w~~ESpRf~~~ 259 (528)
T KOG0253|consen 183 -LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAA-RFLVWVYESPRFYLA 259 (528)
T ss_pred -ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHH-HHHhhcccCcchhhh
Confidence 888888888999999998876666 899999999888887766 99999988887777766 888899999999999
Q ss_pred cCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhh-hhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHH
Q 009563 275 RGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQEN-DASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTIN 353 (532)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (532)
+++++++.+.++++++.|+.+.|.........++.+ ++.+.++.+. +..+....+..+++. |.+++..+.....+
T Consensus 260 ~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~---~a~ke~rg~~~nLls-p~lrkttlllw~iw 335 (528)
T KOG0253|consen 260 KGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKS---SAAKEVRGGTTNLLS-PKLRKTTLLLWRIW 335 (528)
T ss_pred cCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhh---ccccccccchHhhcC-hHHHHHHHHHHHHH
Confidence 999999999999999999999987665444332222 1111111111 111223334555554 55788888888899
Q ss_pred HHHHHHHHHhhhcccc---------------------------CcchHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHH
Q 009563 354 FLCSVVYYGISLNVVN---------------------------LQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTI 406 (532)
Q Consensus 354 ~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~ 406 (532)
+.+.+.||+..+.... .....+...+...+..++|.++.++++||+|||+.+.
T Consensus 336 fgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMa 415 (528)
T KOG0253|consen 336 FGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMA 415 (528)
T ss_pred HhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHH
Confidence 9988888877653211 1123456677888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-
Q 009563 407 GTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV- 485 (532)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~- 485 (532)
...++.+++.+++......+ ...+..+...++..+.+.+.+.|..|++|+..|+++.|.....+.+|+++.|++.
T Consensus 416 l~l~~f~iflfll~~c~~rn----~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA~ 491 (528)
T KOG0253|consen 416 LSLILFGIFLFLLTTCKTRN----AYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIAM 491 (528)
T ss_pred HHHHHHHHHHHHHHHhcCcc----hhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHHH
Confidence 99999999999888877766 4566777788888999999999999999999999999999999999999999988
Q ss_pred --HhhhhhHHHHHHHHHHHHHHHHhhcc-CCCCCCh
Q 009563 486 --VLGGWLPFAVFAACGIIGGLFAFYLP-ETLNKPL 518 (532)
Q Consensus 486 --~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~ 518 (532)
......+..+++.+++++.+...++| |+|+|++
T Consensus 492 ~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 492 RAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred HhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 23356677888888999989888887 8988864
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=6.8e-40 Score=330.97 Aligned_cols=416 Identities=23% Similarity=0.310 Sum_probs=292.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeec-----cccc
Q 009563 48 EFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQ-----WGLF 122 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~~~ 122 (532)
++++++++++.++.++.+++++|....+.. . |.+.++ .+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~--------~--------------------------~~~~~~~~~~~~~~- 53 (502)
T TIGR00887 9 PFGWQHFRAIVIAGVGFFTDSYDLFCISLV--------T--------------------------KMLGYVYYHGKGPL- 53 (502)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHHhccCcccc-
Confidence 688999999999999999999998887776 3 333332 234
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcch------HHHHHHHHHHHHhhcc
Q 009563 123 CEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPN------YSTYVVLRMLTGFSTG 196 (532)
Q Consensus 123 ~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~ 196 (532)
+..+.+++.+.+.+++.++++++|+++|| +|||+++.++.++..+++++++++++ ++.++++|+++|++.|
T Consensus 54 --~~~~~~~~~~~~~ig~~ig~~~~g~l~d~-~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 130 (502)
T TIGR00887 54 --PSSVSAAVNGSASIGTLAGQLFFGWLADK-LGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIG 130 (502)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHh
Confidence 66788999999999999999999999999 99999999999999999999998866 7899999999999999
Q ss_pred ccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--------------------------chHHHHHHH
Q 009563 197 GVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--------------------------TWRALYIAS 250 (532)
Q Consensus 197 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--------------------------~wr~~f~~~ 250 (532)
...+....++.|++|+++|++++++.+.+..+|..+++.++..+. +||+.|.+.
T Consensus 131 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~ 210 (502)
T TIGR00887 131 GDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFG 210 (502)
T ss_pred hhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHH
Confidence 999999999999999999999999999999999998888765431 699999888
Q ss_pred HHHHHHHHHHHhcccccCchhHhhcCCHH-HHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhcc
Q 009563 251 SIPSILFLLIILPFLPESPRWYLVRGKLN-EAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAV 329 (532)
Q Consensus 251 ~~~~~~~~~~~~~~~~esp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (532)
+++.++.. +..+++||||+|+..+++.+ ++++.+.+..+.+..+..++ . ++. ++++ +..
T Consensus 211 ~ip~~i~~-~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~----~---~~~--~~~~----------~~~ 270 (502)
T TIGR00887 211 AVPALLAL-YFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDE----V---EKA--STAV----------EVP 270 (502)
T ss_pred HHHHHHHH-HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCccc----c---cch--hccc----------cch
Confidence 88877755 66788999999998887764 35554544432111100000 0 000 0000 001
Q ss_pred ccchhhhhcCh---HHHHHHHHHHHHHHHHHHHHHHhhhcc----ccCcch------H---------HHHHHHHHHHHHH
Q 009563 330 TGSVIDVIKSP---LTRIRLFLAVTINFLCSVVYYGISLNV----VNLQTN------L---------YLNVLVNAVAEMP 387 (532)
Q Consensus 330 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~---------~~~~~~~~~~~~~ 387 (532)
+.+++++++++ +.++..+.....++...+.+|+...+. ...+.+ . ........++.++
T Consensus 271 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 350 (502)
T TIGR00887 271 KASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVP 350 (502)
T ss_pred hhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 12355666532 222333333333344444444432221 111110 0 0012233445667
Q ss_pred HHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhH
Q 009563 388 AFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNN-GIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAA 466 (532)
Q Consensus 388 ~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~ 466 (532)
+.++.++++||+|||++++.+..++.+++.++...... .... ......+...++..+..+..+.+..|.+|++.|+++
T Consensus 351 g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~ 429 (502)
T TIGR00887 351 GYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHG-FLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTA 429 (502)
T ss_pred HHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhH-HHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHH
Confidence 88899999999999999988887777776666543321 1111 111111122222234556778889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hh-------------hhhHHHHHHHHHHHHHHHHhhccCCCCCChhhhH
Q 009563 467 LGCATQAAQLGAILAPFVVV--LG-------------GWLPFAVFAACGIIGGLFAFYLPETLNKPLYDTM 522 (532)
Q Consensus 467 ~g~~~~~~~~g~~i~p~~~~--~~-------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 522 (532)
.|+.+.++.++++++|.+.. .. ....|++++++.+++.++.+++||+++++++|..
T Consensus 430 ~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~~leei~ 500 (502)
T TIGR00887 430 HGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGKSLEELS 500 (502)
T ss_pred HHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCCCHHhhh
Confidence 99999999999999988771 11 2356788888888777777778999999886643
No 5
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=309.61 Aligned_cols=467 Identities=36% Similarity=0.574 Sum_probs=371.2
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceecc---------CCCCCCC------C-----C------cccC
Q 009563 46 CGEFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCL---------GQGCDPG------E-----K------TVCG 99 (532)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~---------~~~~~~~------~-----~------~~~~ 99 (532)
.++.+++|................+.....+....|++.|. ..|.... . . ..+.
T Consensus 10 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (521)
T KOG0255|consen 10 VGDFGRYQKLLLLLLGLPSIFSALHSFAQIFLAFVPDHHCTEWGCLNDAEDSCLVYWDPTLDPANPLNWPSWKKWLLVIV 89 (521)
T ss_pred hcCCcHHHHHHHHHHHHHHhHHHHHHHHHHhhccCCCchhhhhhcccCCcccceecccCccCcCCccccccccccccccc
Confidence 56889999999888888887777766677777777864441 2332110 0 0 0122
Q ss_pred CCCCcceecCCC-CCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc
Q 009563 100 LEPGSWAWTGGD-GSSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS 178 (532)
Q Consensus 100 ~~~~~~~~~~~~-~~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~ 178 (532)
.....|.|+.+. .-.+..++++.|++.....+..+++++|..+|++++|+++|| +|||+++++++++..++.++.+++
T Consensus 90 ~~~~~~~~~~~~~~~s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a 168 (521)
T KOG0255|consen 90 ICLDGWVYDYGSSVYSIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFA 168 (521)
T ss_pred cccceeEecCCCCcccccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHh
Confidence 345688888765 446667789999999999999999999999999999999999 999999999999999999999999
Q ss_pred chHHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHH
Q 009563 179 PNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ-TWRALYIASSIPSILF 257 (532)
Q Consensus 179 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-~wr~~f~~~~~~~~~~ 257 (532)
+|++.+++.|++.|++.++.......++.|++++++|+.+..+ ......+..+++.+++++. +||+.+++..++.++.
T Consensus 169 ~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~ 247 (521)
T KOG0255|consen 169 PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLF 247 (521)
T ss_pred CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 6666666666666666666 9999999999999987
Q ss_pred HHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhh
Q 009563 258 LLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVI 337 (532)
Q Consensus 258 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (532)
. +.+++.||+|||+..+++.+++.+.+++..+.|+.....+....... ..+........++..+.+++
T Consensus 248 ~-~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~ 315 (521)
T KOG0255|consen 248 L-LLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLEL-----------LLRPLKLLFTEPKISFLDLF 315 (521)
T ss_pred H-HHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHH-----------HhhHhhhhccCCCCchhhhh
Confidence 7 44777779999999999999999999999887633322221111110 00011111112334588999
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHH
Q 009563 338 KSPLTRIRLFLAVTINFLCSVVYYGISLNVVNLQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCL 417 (532)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~ 417 (532)
+.+.+++..+...+.++.....+|+..+.....+.+.+......+.....+....+...|+.|||.....+..+..++++
T Consensus 316 ~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~ 395 (521)
T KOG0255|consen 316 RTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLL 395 (521)
T ss_pred cCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 99988889999999999999999999999999999999888888888888888999999999999999999999999999
Q ss_pred HHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhh----hhhHH
Q 009563 418 LGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLG----GWLPF 493 (532)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~~~~----~~~~~ 493 (532)
...+....... .+..+...+..++.+..+.....+..|.+|+..|..+.+.......+|++++|.+.... ....+
T Consensus 396 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~ 474 (521)
T KOG0255|consen 396 LFGWLPDDLGG-WLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGL 474 (521)
T ss_pred HHHHhhccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchH
Confidence 99988766542 13455666666777778888899999999999999999999999999999999988322 22333
Q ss_pred HHHHHHHHHHHHHH-hhccCCCCCChhhhHHhhhh
Q 009563 494 AVFAACGIIGGLFA-FYLPETLNKPLYDTMAGMKE 527 (532)
Q Consensus 494 ~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~ 527 (532)
.+++....+..++. +++||++++.+.+..++.++
T Consensus 475 ~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~~ 509 (521)
T KOG0255|consen 475 ILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAEN 509 (521)
T ss_pred HHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHHh
Confidence 33455555555554 88999999999887776663
No 6
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.9e-38 Score=299.60 Aligned_cols=384 Identities=25% Similarity=0.361 Sum_probs=292.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc---chHHHHHHHHHHHHhhccccchhhh
Q 009563 127 YKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS---PNYSTYVVLRMLTGFSTGGVGLCAF 203 (532)
Q Consensus 127 ~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~ 203 (532)
...+.+++++.+|.++|+++.|+++|| +|||..+.++.++..++.++..++ +++.+++++|++.|+..|......+
T Consensus 60 ~lwS~~vs~f~iG~~~Gs~~~~~la~~-~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~p 138 (485)
T KOG0569|consen 60 LLWSLIVSIFFIGGMIGSFSSGLLADR-FGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHH
Confidence 468889999999999999999999999 999999999999988888877765 7899999999999999999999999
Q ss_pred heeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHHHhcccccCchhHhh-cCC
Q 009563 204 VLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ-----TWRALYIASSIPSILFLLIILPFLPESPRWYLV-RGK 277 (532)
Q Consensus 204 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-----~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~-~~~ 277 (532)
.|+.|..|++.||....+.+.+..+|..++..++..-. .|++.+.+..+++++.. +...++||||||+.. |++
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~PESPk~Ll~~k~~ 217 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLPESPKYLLIKKGD 217 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCCCCcchHHHHcCC
Confidence 99999999999999999999999999999987765433 79999999999998877 888999999999998 899
Q ss_pred HHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHH-
Q 009563 278 LNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLC- 356 (532)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 356 (532)
.++|++.+++++..++.+... +...++.++ .+..++...+++++++++..++...+.+...+..
T Consensus 218 ~~~A~~sl~~y~G~~~~~~~~--e~~~~e~~~-------------~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq 282 (485)
T KOG0569|consen 218 EEEARKALKFYRGKEDVEAEI--EEMLREIEE-------------EELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQ 282 (485)
T ss_pred HHHHHHHHHHHhCCCcchhHH--HHHHHHHHH-------------hccccccCCcHHHHhcCcchhHHHHHHHHHHHHHH
Confidence 999999998885442211100 000000000 0011124457899999999988877766666553
Q ss_pred -----HHHHHHhhhccccC--cchHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhc---cc
Q 009563 357 -----SVVYYGISLNVVNL--QTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKN---NG 426 (532)
Q Consensus 357 -----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~---~~ 426 (532)
...+|...++...- ...........++..++.++++.+++||+|||++++.+..++.++.+++..... ..
T Consensus 283 ~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~ 362 (485)
T KOG0569|consen 283 FSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSF 362 (485)
T ss_pred hcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33455555544321 223345566677888899999999999999999999999988888877765422 11
Q ss_pred -hhH-HHHHHHHHHHHHHHH-hhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHH
Q 009563 427 -IWK-IVRMICGVMGIFGVA-GTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAA 498 (532)
Q Consensus 427 -~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~ 498 (532)
.|. +..+++.+++.+.++ +..|+.+.+.+|++|++.|+.+.++....+++..++-.... .+|. ..|+.+.+
T Consensus 363 ~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i 441 (485)
T KOG0569|consen 363 GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVI 441 (485)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHH
Confidence 111 122344444444444 34689999999999999999999999999988876655444 4445 66777766
Q ss_pred HHHHHHHH-HhhccCCCCCChhhhHHhhhhc
Q 009563 499 CGIIGGLF-AFYLPETLNKPLYDTMAGMKEG 528 (532)
Q Consensus 499 ~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~ 528 (532)
.+.+..+. +.++||||+|+..|..++.+++
T Consensus 442 ~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 442 PLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 66665554 5788999999999888776644
No 7
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-37 Score=280.38 Aligned_cols=394 Identities=21% Similarity=0.188 Sum_probs=302.3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhh
Q 009563 48 EFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKY 127 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~ 127 (532)
...++|+++++.+++++...++.+.+..+. . |.+.+|.++ |+.
T Consensus 22 ~y~~~r~qif~~~fiGYa~fYl~RknF~~a--------~--------------------------p~l~e~~~l---sk~ 64 (448)
T COG2271 22 TYKRWRIQIFLSIFIGYAAFYLTRKNFNLA--------M--------------------------PALIEDGGL---SKT 64 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhc--------c--------------------------HHHHHhcCC---CHH
Confidence 356899999999999999999999999998 6 999999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheee
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLAT 207 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 207 (532)
|.|++.+.++++|.++-++.|.++|| .++|+.+.+|+++.++..++++++++.+.+.+..++.|..+|.-.|.+...+.
T Consensus 65 ~lG~i~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~ 143 (448)
T COG2271 65 QLGILGSAFSITYGVSKFVMGVLSDR-SNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTIT 143 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccc-CCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 99999999999999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHH--HHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHH
Q 009563 208 EPVGPSKRGAAGMSTFYFFSTGIALLSGIA--YIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAM 282 (532)
Q Consensus 208 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~--~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 282 (532)
.|++++|||+..++++.+.++|..+.+++. +.+. +||..|++.++++++..++.++..+|+|+..-. .+.++.+
T Consensus 144 ~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GL-P~ie~~~ 222 (448)
T COG2271 144 HWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGL-PPIEEYR 222 (448)
T ss_pred HHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCC-CCHHHhh
Confidence 999999999999999999999999999888 6666 999999999999999998999999999853210 0111110
Q ss_pred HHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHH
Q 009563 283 KIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYG 362 (532)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (532)
+ ++.+..+++++.+. ......-.+-+++||..|...+...+.+..-......
T Consensus 223 ~---------------------d~~e~~~~~~~~~~-------ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW 274 (448)
T COG2271 223 G---------------------DPLEIYEEEKENEG-------LTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDW 274 (448)
T ss_pred c---------------------CchhhhhhhccCCC-------ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhh
Confidence 0 00000000000000 0011123456788988777666666666664444433
Q ss_pred hhhcccc-Ccc---hHHHHHHHHHHHHHHHHHHHHHHHhhh--CCchhHH-HHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 009563 363 ISLNVVN-LQT---NLYLNVLVNAVAEMPAFTITAVLLDKL--GRKPMTI-GTLWFSGFFCLLGSLVKNNGIWKIVRMIC 435 (532)
Q Consensus 363 ~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~--gr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (532)
.|.++.+ .+. +......+.-.++++|++++|+++||+ |||.... +.+++..++...+...++.+.. +..++
T Consensus 275 ~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~--l~~~~ 352 (448)
T COG2271 275 GPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYL--LDAIL 352 (448)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHH--HHHHH
Confidence 3444433 222 334455666788999999999999995 6676554 4445555555555555544322 56666
Q ss_pred HHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHH-HHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHhh
Q 009563 436 GVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQL-GAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAFY 509 (532)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
+++.|+...+..-+.-..+.|..|.+..|++.|+...++++ |...+.... .+|+...|+++.+.++++.++.+.
T Consensus 353 l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 353 LFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred HHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 77777777777777888899999999999999999999998 666654444 457888888888888887776644
Q ss_pred c
Q 009563 510 L 510 (532)
Q Consensus 510 l 510 (532)
+
T Consensus 433 ~ 433 (448)
T COG2271 433 V 433 (448)
T ss_pred H
Confidence 3
No 8
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=3.4e-36 Score=303.98 Aligned_cols=429 Identities=19% Similarity=0.279 Sum_probs=289.0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhH
Q 009563 49 FGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYK 128 (532)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~ 128 (532)
..+++++...++.++.+.+++|...++.. . + .+.+.-.+.+.+++++ +..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------------~----~~~~~~~~~~~~~~~~---~~~~ 56 (479)
T PRK10077 6 NSSYIFSITLVATLGGLLFGYDTAVISGT--------V--------------E----SLNTVFVAPQNLSESA---ANSL 56 (479)
T ss_pred cchHHHHHHHHHHHHHHhcCcccceehHh--------H--------------H----HHHHHhcccccccccC---ChhH
Confidence 45677888888888889999987766655 2 0 0000001234445588 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc------------chHHHHHHHHHHHHhhcc
Q 009563 129 VGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS------------PNYSTYVVLRMLTGFSTG 196 (532)
Q Consensus 129 ~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~ 196 (532)
.+++.+++.++..++++++|+++|| +|||++++++.++++++.++++++ +.++.++++|+++|++.|
T Consensus 57 ~~~~~s~~~ig~~~~~~~~G~l~dr-~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g 135 (479)
T PRK10077 57 LGFCVASALIGCIIGGALGGYCSNR-FGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVG 135 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHh
Confidence 9999999999999999999999999 999999999999999998888763 235678899999999999
Q ss_pred ccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----------chHHHHHHHHHHHHHHHHHHhccc
Q 009563 197 GVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ-----------TWRALYIASSIPSILFLLIILPFL 265 (532)
Q Consensus 197 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-----------~wr~~f~~~~~~~~~~~~~~~~~~ 265 (532)
...+...++++|++|+++|++++++.+.+..+|.++++.+++.+. +||+.|++.+++.++.. +..+++
T Consensus 136 ~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l 214 (479)
T PRK10077 136 LASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL-MLLYFV 214 (479)
T ss_pred HHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH-HHHHcC
Confidence 999999999999999999999999999999999999887765431 89999999888887765 557789
Q ss_pred ccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHH
Q 009563 266 PESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIR 345 (532)
Q Consensus 266 ~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (532)
||+|+++..+++.+++++..++..+.+ +. .+..++ .....++... ..+..+.-. ...
T Consensus 215 ~~s~~~l~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~--------~~~~~~~~~~---~~~~~~~~~--~~~ 271 (479)
T PRK10077 215 PETPRYLMSRGKQEQAEGILRKIMGNT------LA----TQALQE--------IKHSLDHGRK---TGGKLLMFG--VGV 271 (479)
T ss_pred CCCcHHHHHcCCHHHHHHHHHHHcCCh------hH----HHHHHH--------HHHHHHHhhh---hhhhhcchh--HHH
Confidence 999998877777777665554432110 00 000000 0000000000 000111100 011
Q ss_pred HHHHHHHHHH-----HHHHHHHhhhccccCc---chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHH
Q 009563 346 LFLAVTINFL-----CSVVYYGISLNVVNLQ---TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCL 417 (532)
Q Consensus 346 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~ 417 (532)
.......... .....|..+......+ ..........++..+++.++.+++.||+|||++++.+..+.+++.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~ 351 (479)
T PRK10077 272 IVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMF 351 (479)
T ss_pred HHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHH
Confidence 1111111111 1112222333322222 1233344456677888999999999999999999999988888877
Q ss_pred HHHhhhccchhHHHHHHHHHHHHHHHHh-hhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----------
Q 009563 418 LGSLVKNNGIWKIVRMICGVMGIFGVAG-TYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV----------- 485 (532)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----------- 485 (532)
++..................+.+++.+. ..+..+.++.|.+|++.|+++.|+.+...++|.++++.+.
T Consensus 352 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~ 431 (479)
T PRK10077 352 SLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVA 431 (479)
T ss_pred HHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhh
Confidence 7765432221111223333444444433 2367789999999999999999999999999888875554
Q ss_pred HhhhhhHHHHHHHHHHHHHHHH-hhccCCCCCChhhhHHhhhhcCCC
Q 009563 486 VLGGWLPFAVFAACGIIGGLFA-FYLPETLNKPLYDTMAGMKEGEGV 531 (532)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ 531 (532)
..+....|++++++.+++.++. ++.||+++++.+|.+++.++..|+
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 478 (479)
T PRK10077 432 HFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPETKK 478 (479)
T ss_pred hccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhcccC
Confidence 2334556777777766666555 456899998888776666555443
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4e-35 Score=295.07 Aligned_cols=385 Identities=20% Similarity=0.209 Sum_probs=255.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhh--HHHH
Q 009563 54 LRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKY--KVGL 131 (532)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~--~~~~ 131 (532)
++++.+++++.+++++|...+++. . |.+.++|+... ++. ..+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~--------~--------------------------~~i~~~~~~~~-~~~~~~~~~ 59 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFV--------A--------------------------YALGKVFFPGA-DPSVQMIAA 59 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHhhCCCC-CcHHHHHHH
Confidence 456777889999999999998888 5 78888886521 121 1222
Q ss_pred --HHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHH--------HHHHHHHHHhhccccchh
Q 009563 132 --VQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYST--------YVVLRMLTGFSTGGVGLC 201 (532)
Q Consensus 132 --~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~ 201 (532)
+.++.++++.++++++|+++|| +|||+++.+++++++++++++++++|+.+ +++.|+++|++.|+.++.
T Consensus 60 ~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~ 138 (490)
T PRK10642 60 LATFSVPFLIRPLGGLFFGMLGDK-YGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTG 138 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHH
Confidence 2578889999999999999999 99999999999999999999999999875 899999999999999999
Q ss_pred hhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh----------h-chHHHHHHHHHHHHHHHHHHhcccccCch
Q 009563 202 AFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF----------Q-TWRALYIASSIPSILFLLIILPFLPESPR 270 (532)
Q Consensus 202 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l----------~-~wr~~f~~~~~~~~~~~~~~~~~~~esp~ 270 (532)
..+++.|++|+++|+++.++...+..+|..+++.+...+ . |||+.|++.+++.++.. +....+||+|+
T Consensus 139 ~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~-~~~~~~~esp~ 217 (490)
T PRK10642 139 ASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGL-YLRHALEETPA 217 (490)
T ss_pred HHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHH-HHHHcCCCChh
Confidence 999999999999999999999988888888877654332 1 89999999876666544 55678899987
Q ss_pred hHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHH
Q 009563 271 WYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAV 350 (532)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (532)
+...+++.++.. .+. .. +..+.++++++++. ++......
T Consensus 218 ~~~~~~~~~~~~----------~~~-------------------~~----------~~~~~~~~~~~~~~--~~~~~~~~ 256 (490)
T PRK10642 218 FQQHVDKLEQGD----------REG-------------------LQ----------DGPKVSFKEIATKH--WRSLLTCI 256 (490)
T ss_pred HHHHHHhhhhhc----------ccc-------------------cc----------ccccCCHHHHHHHh--HHHHHHHH
Confidence 643221110000 000 00 00111344455431 11122111
Q ss_pred HHHH----HHHHHHHHhhhcc-ccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHH-HHh
Q 009563 351 TINF----LCSVVYYGISLNV-VNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLL-GSL 421 (532)
Q Consensus 351 ~~~~----~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~-~~~ 421 (532)
...+ .........+.++ ...+.+ .........++.+++.++.|+++||+|||+.+..+.++..+..+. +..
T Consensus 257 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 336 (490)
T PRK10642 257 GLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFIL 336 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1212222223333 222222 222333445667788889999999999999887776544433322 222
Q ss_pred hhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHHH-----hh-hhhHHHH
Q 009563 422 VKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVV-----LG-GWLPFAV 495 (532)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~~-----~~-~~~~~~~ 495 (532)
....... ..++..++.+++.+...+....+..|.+|++.|+++.|+.+....+++.++|.+.. .+ ...++++
T Consensus 337 ~~~~~~~--~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~ 414 (490)
T PRK10642 337 INSNVIG--LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYY 414 (490)
T ss_pred HhCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHH
Confidence 2222211 33344455555555666667778889999999999999876667777778887762 12 2334445
Q ss_pred HHHHHHHHHHHHhhccCCCCCCh
Q 009563 496 FAACGIIGGLFAFYLPETLNKPL 518 (532)
Q Consensus 496 ~~~~~~~~~~~~~~l~~~~~~~~ 518 (532)
..+..+++.+..+++||++++..
T Consensus 415 ~~~~~~i~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 415 LMVVAVIGLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHHhccccCCCC
Confidence 55555666666667788766544
No 10
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=4.6e-34 Score=280.85 Aligned_cols=385 Identities=13% Similarity=0.139 Sum_probs=262.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHH
Q 009563 51 PWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVG 130 (532)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~ 130 (532)
|.+|+++.+++++++++++|..+.++. . |.+.+|+|+ +..+.|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~--------------------------~~l~~~~~~---s~~~~g 46 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFA--------G--------------------------LTMGKDLGL---SATMFG 46 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHH--------H--------------------------HhhHhhcCC---CHHHHH
Confidence 567889999999999999999999988 5 889999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeeccc
Q 009563 131 LVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPV 210 (532)
Q Consensus 131 ~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 210 (532)
++.+++.+++++++++.|+++|| +|||+++..+.++++++++++++++|++++++.|+++|++.+...+....++.|++
T Consensus 47 ~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 125 (412)
T TIGR02332 47 LAATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWF 125 (412)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHc
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---------chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHH
Q 009563 211 GPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---------TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEA 281 (532)
Q Consensus 211 ~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---------~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~ 281 (532)
|+++|+++++++..+.++|.++++.+++.+. |||+.|++.+++.++..++.++++||+|+...- ...++.
T Consensus 126 ~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~-l~~~~~ 204 (412)
T TIGR02332 126 PAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKW-LDEEDK 204 (412)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCC-CCHHHH
Confidence 9999999999999999999999999987652 899999999988888776777888999852100 011111
Q ss_pred HHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHH
Q 009563 282 MKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYY 361 (532)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (532)
+...+.. +.+..+.++ .++. ..+ .+...+..+++++ ++.++......+...........
T Consensus 205 ~~~~~~~-~~~~~~~~~--------~~~~---~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 263 (412)
T TIGR02332 205 KALKEMI-DNDQLTLEQ--------PEGA---FAH--------AAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINI 263 (412)
T ss_pred HHHHHHH-Hhccccccc--------cccc---ccc--------ccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 000000000 0000 000 0000011233333 34444333333332222323333
Q ss_pred HhhhccccC--cc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhH-HHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 009563 362 GISLNVVNL--QT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMT-IGTLWFSGFFCLLGSLVKNNGIWKIVRMIC 435 (532)
Q Consensus 362 ~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (532)
..+.++.+. +. ..........++.+++.++.++++||+++|+.. .....+..+.. .+...... .. ..+..
T Consensus 264 ~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~~~~~-~~--~~~~~ 339 (412)
T TIGR02332 264 WTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW-LLASATDH-NL--IQLLG 339 (412)
T ss_pred HHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH-HHHHhcCC-HH--HHHHH
Confidence 344444432 21 223334555677888999999999999977753 33333333332 22222222 11 22222
Q ss_pred HHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh-hhhHHHHHHHH
Q 009563 436 GVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLG-GWLPFAVFAAC 499 (532)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~-~~~~~~~~~~~ 499 (532)
..+..++.....+..+....|.+|++.|+++.|+.+...++|++++|.+. ..+ +...+.+.+++
T Consensus 340 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 340 IIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 22233333333444556667889999999999999999999999999877 222 45555555443
No 11
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.6e-34 Score=263.94 Aligned_cols=367 Identities=19% Similarity=0.189 Sum_probs=291.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHH
Q 009563 51 PWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVG 130 (532)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~ 130 (532)
+..|..++.+.++.|..+.+-+.+.-+ + |++.+|+|+ |..+.|
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gL--------L--------------------------p~iA~dl~v---s~~~aG 51 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGL--------L--------------------------PPIAADLGV---SEGAAG 51 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhc--------h--------------------------HHHHHHcCC---CHHHHH
Confidence 445667777777777777766655555 4 999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeeccc
Q 009563 131 LVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPV 210 (532)
Q Consensus 131 ~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 210 (532)
++.|+|.++.+++.++...+.|| +.||++++..+.++.++.+++++++||+.++++|++.|++.|..++...++..+..
T Consensus 52 ~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lv 130 (394)
T COG2814 52 QLITAYALGVALGAPLLALLTGR-LERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLV 130 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHH
Q 009563 211 GPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRA 287 (532)
Q Consensus 211 ~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~ 287 (532)
|+++|++++++...+..++.++|.+++.++. |||+.|+..+.++++..+..+..+| |+.. +++
T Consensus 131 pp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~--~~~---------- 196 (394)
T COG2814 131 PPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEI--SGS---------- 196 (394)
T ss_pred CccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccC--CCC----------
Confidence 9999999999999999999999999999987 9999999999999999988888998 2100 000
Q ss_pred HHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009563 288 IAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNV 367 (532)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (532)
+.....+..+.+|+|..+..+....+....+...|.++.-++
T Consensus 197 --------------------------------------~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L 238 (394)
T COG2814 197 --------------------------------------LPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFL 238 (394)
T ss_pred --------------------------------------CCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHH
Confidence 000111345678899888877777777666655554444443
Q ss_pred cc-Cc---chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 009563 368 VN-LQ---TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGV 443 (532)
Q Consensus 368 ~~-~~---~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (532)
++ .+ .......+..+++.++|++++|++.|| +.|+.+.....+.++..+.+.+..+... ...+..++.++..
T Consensus 239 ~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~---~~~~~~~~wg~a~ 314 (394)
T COG2814 239 ESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPA---LALALLFLWGFAF 314 (394)
T ss_pred HHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHH---HHHHHHHHHHHHh
Confidence 33 32 234566677889999999999999999 8888888888888888877776655542 4455555566666
Q ss_pred HhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHhhccC
Q 009563 444 AGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAFYLPE 512 (532)
Q Consensus 444 ~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~ 512 (532)
............+.. ++.+..+.+++....++|..+|..+. ..|+....++.+.+.+++.++.+...+
T Consensus 315 ~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 315 SPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred hhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666666666677743 56779999999888888877766665 556777778888887777776655443
No 12
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=2.7e-34 Score=276.37 Aligned_cols=351 Identities=14% Similarity=0.027 Sum_probs=246.9
Q ss_pred cceecCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHH
Q 009563 104 SWAWTGGDGSSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYST 183 (532)
Q Consensus 104 ~~~~~~~~~~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 183 (532)
.|....+..|.+++|||+ |..+.|++.+.+.+++.+++++.|+++|| +|||+++..+......+.+....++++++
T Consensus 6 ~~~~~~~~lp~i~~~~~~---s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDV---SKEELGLLAITYPAAFLALTIPSGLLLDR-AFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred HHHHHHhhHHHHHHHhCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 344455556999999999 99999999999999999999999999999 99999876665555444433334479999
Q ss_pred HHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHH
Q 009563 184 YVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLI 260 (532)
Q Consensus 184 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~ 260 (532)
+++.|+++|++.+. .+.....++|++|+++|++++++...+..+|.++++.++..+. |||+.|++.+++.++..++
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 99999999999986 4555566699999999999999999999999999999998886 9999999989888887777
Q ss_pred HhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcCh
Q 009563 261 ILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSP 340 (532)
Q Consensus 261 ~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (532)
.++++||+|++..+ +.+ . + +....++++++++
T Consensus 161 ~~~~lp~~p~~~~~--~~~--------------------------~-------------~-------~~~~~~~~ll~~~ 192 (368)
T TIGR00903 161 VLAALPALPFQAAE--GFG--------------------------F-------------K-------DAVKEFGALAGRK 192 (368)
T ss_pred HHHHcCCCCCCCCC--Ccc--------------------------h-------------H-------HHHHHHHHHHcCh
Confidence 88889998753100 000 0 0 0001356788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHHHHHHhhhCCc---hhHH-HHHHHHHHHH
Q 009563 341 LTRIRLFLAVTINFLCSVVYYGISLNVVNLQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRK---PMTI-GTLWFSGFFC 416 (532)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~---~~~~-~~~~~~~~~~ 416 (532)
.++......++............+.++.+.+.+.. ......+..+.+.+..+++.||..|| +... ....+.++.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~ 271 (368)
T TIGR00903 193 DLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFF 271 (368)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 77665555444444433333334444443333322 23333444455666668888887654 3222 2333333333
Q ss_pred HHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH--Hh-hhhhHH
Q 009563 417 LLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV--VL-GGWLPF 493 (532)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~--~~-~~~~~~ 493 (532)
..+....+ .. ..++...+.+++....++..+++..|.+|++.|+++.|+.+..+++|+.++|.+. .. +....|
T Consensus 272 ~~~~~~~~--~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f 347 (368)
T TIGR00903 272 LALAFELN--RL--ALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFISSAEAYF 347 (368)
T ss_pred HHHHHccc--cH--HHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 33332222 11 2344445566666677778889999999999999999999999999998988877 22 556778
Q ss_pred HHHHHHHHHHHHHHhhccC
Q 009563 494 AVFAACGIIGGLFAFYLPE 512 (532)
Q Consensus 494 ~~~~~~~~~~~~~~~~l~~ 512 (532)
.++++..+++.+..+.+++
T Consensus 348 ~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 348 TFLAILITIAFAIALLLPN 366 (368)
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 8888888877776654443
No 13
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-33 Score=285.58 Aligned_cols=385 Identities=21% Similarity=0.303 Sum_probs=280.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhhee
Q 009563 127 YKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLA 206 (532)
Q Consensus 127 ~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 206 (532)
.+.+|+.+.+.++..++++++|+++|+ +|||+.++++.+++.++.+++++++|+.+++++|+++|+|.|......+.|+
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~ 167 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYI 167 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhH
Confidence 466999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHH
Q 009563 207 TEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAM 282 (532)
Q Consensus 207 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 282 (532)
+|+.|++.||...+..+....+|..++..++.... +||..+.+..+++++..+. .+++||+|+|+.++++.++++
T Consensus 168 sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~ 246 (513)
T KOG0254|consen 168 SEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAK 246 (513)
T ss_pred hhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHH
Confidence 99999999999999999999999999977777764 6999999999999998855 999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHH----
Q 009563 283 KIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSV---- 358 (532)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 358 (532)
+.+.++...++.+...+.... +.. .............++++++ +..++..........+...
T Consensus 247 ~~l~~l~g~~~~~~~~~~~~~----~~~---------~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~ 312 (513)
T KOG0254|consen 247 RSLKRLRGLSPEDVEVELELL----KIK---------LLVEAEVAEGKASWGELFS-PKVRKRLIIGLLLQLFQQLTGIN 312 (513)
T ss_pred HHHHHHhCCCCcchHHHHHHH----HHH---------HHHhhhcccccccHHHhcC-cchHHHHHHHHHHHHHHHHhCCc
Confidence 999888653311111111000 000 0000000001112344444 4444445544444444322
Q ss_pred --HHHHhhhccccCcchH-HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccc---------
Q 009563 359 --VYYGISLNVVNLQTNL-YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNG--------- 426 (532)
Q Consensus 359 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~--------- 426 (532)
.+|...++......+. .......++..+++.+++.++.||+|||++++.+...+.+++++++......
T Consensus 313 ~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~ 392 (513)
T KOG0254|consen 313 YVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKG 392 (513)
T ss_pred eEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 2333333222222222 5556667788888999999999999999999999999999988887653221
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH----Hhh-hhhHHHHHHHHHH
Q 009563 427 IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV----VLG-GWLPFAVFAACGI 501 (532)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~~~-~~~~~~~~~~~~~ 501 (532)
..+.......+.......+..++.+.+.+|.+|.+.|+.+.++....+++...+-.... ... ....|..++....
T Consensus 393 ~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~ 472 (513)
T KOG0254|consen 393 AGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICL 472 (513)
T ss_pred hhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHH
Confidence 11112222222333344456678889999999999999999999999888766554333 121 2456666666666
Q ss_pred HHHH--HHhhccCCCCCChhhhHHhhhh
Q 009563 502 IGGL--FAFYLPETLNKPLYDTMAGMKE 527 (532)
Q Consensus 502 ~~~~--~~~~l~~~~~~~~~~~~~~~~~ 527 (532)
+..+ ..+++||+|++++++.++..++
T Consensus 473 ~~~~~fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 473 LSLIIFVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred HHHHHHheEEcccCCCCcHHHHHHHHHc
Confidence 5555 4478899999999988765544
No 14
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=5.9e-34 Score=285.28 Aligned_cols=392 Identities=15% Similarity=0.105 Sum_probs=268.4
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhH
Q 009563 49 FGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYK 128 (532)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~ 128 (532)
..|..+.++.++++++++.+.++...+.. . |.+.+|+|+ +..+
T Consensus 23 ~~~~~~~i~~~~~~~~~~~y~~r~~~~~~--------~--------------------------~~i~~~~~~---s~~~ 65 (467)
T PRK09556 23 WFKPFMQSYLVVFIGYLTMYLIRKNFKAA--------Q--------------------------NDMISTYGL---STTE 65 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhh--------h--------------------------HHHHHhcCC---CHHH
Confidence 45678888999999999999999888877 5 899999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh-----cchHHHHHHHHHHHHhhccccchhhh
Q 009563 129 VGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF-----SPNYSTYVVLRMLTGFSTGGVGLCAF 203 (532)
Q Consensus 129 ~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~ 203 (532)
.|++.+++.+++++++++.|+++|| +|||+++.++.++++++.++.++ +++++.+++.|+++|++.+...+...
T Consensus 66 ~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 144 (467)
T PRK09556 66 LGMIGLGFSITYGVGKTLVGYYADG-KNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSY 144 (467)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHhhc-cCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHH
Confidence 9999999999999999999999999 99999999988888877766654 68999999999999999999999999
Q ss_pred heeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh------chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCC
Q 009563 204 VLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ------TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGK 277 (532)
Q Consensus 204 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~------~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~ 277 (532)
.++.||+|+++|++++++...+.++|.++++.+..++. +||..|.+.+++.++..++.+++.++.|+......
T Consensus 145 ~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~- 223 (467)
T PRK09556 145 STITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGK- 223 (467)
T ss_pred HHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCC-
Confidence 99999999999999999999999999999988875442 59999998888888777666667777764211000
Q ss_pred HHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccc-hhhhhcChHHHHHHHHHHHHHHHH
Q 009563 278 LNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGS-VIDVIKSPLTRIRLFLAVTINFLC 356 (532)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 356 (532)
.++. . + + ...++++ ..+.++ ...... .+..++++.++...+..++.....
T Consensus 224 ~~~~------~---~-----~----~~~~~~~---~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 274 (467)
T PRK09556 224 AEEI------F---G-----E----PISEEDK---ETESTD--------MTKWQIFVEYVLKNPVIWLLCFANIFLYIVR 274 (467)
T ss_pred hhhc------c---c-----C----ccchhhh---cccccc--------CcHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 0000 0 0 0 0000000 000000 000001 123677877665555444444333
Q ss_pred HHHHHHhhhcc-ccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 009563 357 SVVYYGISLNV-VNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVR 432 (532)
Q Consensus 357 ~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (532)
....+..+.++ ...+.+. ........++.+++.++.|+++||++||+.+.....+..++..++......... ..
T Consensus 275 ~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 352 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEY--MY 352 (467)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHH--HH
Confidence 22333334333 3333332 233444556788999999999999999887665544433333222222222221 23
Q ss_pred HHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHH-HHHHHHHHH----H-------------hhhhhHHH
Q 009563 433 MICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQL-GAILAPFVV----V-------------LGGWLPFA 494 (532)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-g~~i~p~~~----~-------------~~~~~~~~ 494 (532)
.+..++.++..............|.+|++.+|++.|+.+..+++ |++++|.+. . .++...|+
T Consensus 353 ~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~ 432 (467)
T PRK09556 353 LASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFA 432 (467)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHH
Confidence 33344444333333333345667999999999999999999986 667887776 2 23566777
Q ss_pred HHHHHHHHHHHHHhhc
Q 009563 495 VFAACGIIGGLFAFYL 510 (532)
Q Consensus 495 ~~~~~~~~~~~~~~~l 510 (532)
+++++.+++.++.+++
T Consensus 433 ~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 433 ALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777776665544
No 15
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=6.7e-33 Score=274.96 Aligned_cols=379 Identities=17% Similarity=0.131 Sum_probs=245.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHH
Q 009563 50 GPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKV 129 (532)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~ 129 (532)
+++++..+..++++++++++|...+++. . |.+.++++....+..+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~--------------------------~~l~~~~~~~~~~~~~~ 62 (432)
T PRK10406 17 TRRRIWAIVGASSGNLVEWFDFYVYSFC--------S--------------------------LYFAHIFFPSGNTTTQL 62 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHHhCCCCCchHHH
Confidence 3445667777888999999999999888 5 88888885211144444
Q ss_pred HH---HHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHH--------HHHHHHHHHHhhcccc
Q 009563 130 GL---VQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYS--------TYVVLRMLTGFSTGGV 198 (532)
Q Consensus 130 ~~---~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~ 198 (532)
+. +.+..+++..++++++|+++|| +|||+++.++.++++++++++++++++. .+++.|+++|++.|..
T Consensus 63 ~~~~~~~~~~~~~~~ig~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~ 141 (432)
T PRK10406 63 LQTAGVFAAGFLMRPIGGWLFGRIADK-HGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGE 141 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhh
Confidence 43 4455555666999999999999 9999999999999999999999998864 5899999999999999
Q ss_pred chhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh----------h-chHHHHHHHHHHHHHHHHHHhccccc
Q 009563 199 GLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF----------Q-TWRALYIASSIPSILFLLIILPFLPE 267 (532)
Q Consensus 199 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l----------~-~wr~~f~~~~~~~~~~~~~~~~~~~e 267 (532)
.+...+++.|++|+++|+++.++...+...|.++++.+...+ . |||++|++.+++.++.. .....+||
T Consensus 142 ~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e 220 (432)
T PRK10406 142 YGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDE 220 (432)
T ss_pred HhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCC
Confidence 999999999999999999999999888888888877654432 2 89999999888777654 45556777
Q ss_pred CchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHH
Q 009563 268 SPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLF 347 (532)
Q Consensus 268 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (532)
+|++.. ++ . +...+++++++++..+...+
T Consensus 221 ~~~~~~--------~~-------~------------------------------------~~~~~~~~l~~~~~~~~~~~ 249 (432)
T PRK10406 221 TSQQET--------RA-------L------------------------------------KEAGSLKGLWRNRRAFIMVL 249 (432)
T ss_pred CchHHH--------hh-------h------------------------------------cccccHHHHHhhHHHHHHHH
Confidence 653200 00 0 00113556677665443322
Q ss_pred HHHHH-HHHH-HHHHHHhhhccccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHh-
Q 009563 348 LAVTI-NFLC-SVVYYGISLNVVNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSL- 421 (532)
Q Consensus 348 ~~~~~-~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~- 421 (532)
..... .... ....|...+..+..+.+. ........+...++..+.|+++||++||+.+.....+..+....+..
T Consensus 250 ~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 329 (432)
T PRK10406 250 GFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSA 329 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 22221 1111 222222222222233222 22233334455677788899999999998877665544333322221
Q ss_pred hhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHH-HHHHHHHHH----Hhh-hhhHHHH
Q 009563 422 VKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQL-GAILAPFVV----VLG-GWLPFAV 495 (532)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-g~~i~p~~~----~~~-~~~~~~~ 495 (532)
........ ..+....+..+..+...+..+.+..|.+|++.|+++.|+.+..+++ ++...|.+. ..+ +...+++
T Consensus 330 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~ 408 (432)
T PRK10406 330 LQNVSSPY-AAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWY 408 (432)
T ss_pred HHcCCcHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHH
Confidence 11111111 1222222222333344456678899999999999999999987664 233466544 233 3334555
Q ss_pred HHHHHHHHHHHHhhccCCCCCC
Q 009563 496 FAACGIIGGLFAFYLPETLNKP 517 (532)
Q Consensus 496 ~~~~~~~~~~~~~~l~~~~~~~ 517 (532)
.++..+++.+..+++ ++++|+
T Consensus 409 ~~~~~~i~~~~~~~l-~~~~~~ 429 (432)
T PRK10406 409 VTLMAVVAFLVSLML-HRKGKG 429 (432)
T ss_pred HHHHHHHHHHHHHHh-hhcccc
Confidence 555555555555544 334443
No 16
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1.1e-33 Score=286.45 Aligned_cols=390 Identities=24% Similarity=0.313 Sum_probs=258.5
Q ss_pred Cceeecccccc-----hhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc---chHHHH
Q 009563 113 SSTVTQWGLFC-----EEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS---PNYSTY 184 (532)
Q Consensus 113 ~~i~~~~~~~~-----~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l 184 (532)
|.+..+++... .+..+.+++.+++.++..++++++|+++|| +|||++++++.+++.++.+++.+. .+++.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (481)
T TIGR00879 52 ALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDR-FGRKKSLLIIALLFVIGAILMGLAAFALSVEML 130 (481)
T ss_pred hcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhh-hhhHHHHHHHHHHHHHHHHHHHHhccccchHHH
Confidence 56666666510 038999999999999999999999999999 999999999999999999998554 456689
Q ss_pred HHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHH---HHhh---chHHHHHHHHHHHHHHH
Q 009563 185 VVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIA---YIFQ---TWRALYIASSIPSILFL 258 (532)
Q Consensus 185 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~---~~l~---~wr~~f~~~~~~~~~~~ 258 (532)
+++|+++|++.+...+....++.|++|+++|++++++.+.+..+|..+++.++ .... +||+.|++.++..++..
T Consensus 131 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~ 210 (481)
T TIGR00879 131 IVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF 210 (481)
T ss_pred HHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998 5543 99999999766665554
Q ss_pred HHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhc
Q 009563 259 LIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIK 338 (532)
Q Consensus 259 ~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (532)
+..+++||+|++...+++.++..+..++....+. .+. . . .+........ ...+.+ ..+..+++.++
T Consensus 211 -~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~-~-~~~~~~~~~~----~~~~~~---~~~~~~~~~~~ 276 (481)
T TIGR00879 211 -LGLFFLPESPRWLVGKGRVEEARKSLARLRGTSG---EDK-E-L-LDELELIDIK----RSIEKR---SVQPSWGSLFS 276 (481)
T ss_pred -HHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCC---CcH-H-H-HHHHHHHHHH----HHHHHh---hccccHHHHHh
Confidence 6677889999887766666554443333211110 000 0 0 0000000000 000000 00111222222
Q ss_pred Ch--HHHHHHHHHHHHHHHH----HHHHHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHH
Q 009563 339 SP--LTRIRLFLAVTINFLC----SVVYYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTL 409 (532)
Q Consensus 339 ~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~ 409 (532)
.. ..+..++...+..+.. ....+..+......+.+ .........++.+++.++.+++.||++||+.+..+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 356 (481)
T TIGR00879 277 STRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGA 356 (481)
T ss_pred cCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 11 1122222222222221 12223333333333322 234445556777889999999999999999998888
Q ss_pred HHHHHHHHHHHhh---hccc----hhHHHHHHHHHHHHHHHH-hhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHH
Q 009563 410 WFSGFFCLLGSLV---KNNG----IWKIVRMICGVMGIFGVA-GTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILA 481 (532)
Q Consensus 410 ~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~ 481 (532)
.+.+++++++.+. .... ... ..+....+...+.+ ...+....+..|.+|++.|+++.|+.+...++|++++
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~ 435 (481)
T TIGR00879 357 AGMAICLFVLGILGASFVTGSSKSSGN-VAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIV 435 (481)
T ss_pred HHHHHHHHHHHHHhhcccCCcccchhH-HHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Confidence 8777777666532 1111 011 22222222222222 3346667788999999999999999999999999999
Q ss_pred HHHH-----HhhhhhHHHHHHHHHHHHHHHH-hhccCCCCCCh
Q 009563 482 PFVV-----VLGGWLPFAVFAACGIIGGLFA-FYLPETLNKPL 518 (532)
Q Consensus 482 p~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~ 518 (532)
|.+. ..++...|++.+++++++.++. ++.||+++++.
T Consensus 436 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 436 GFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTL 478 (481)
T ss_pred HHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCCh
Confidence 8876 3356677888888877776665 45677776654
No 17
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=5.7e-33 Score=274.26 Aligned_cols=371 Identities=20% Similarity=0.228 Sum_probs=271.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHH
Q 009563 50 GPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKV 129 (532)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~ 129 (532)
.+++|.++.++++..+.+++|....+.. . |.+.+++|+ ++.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------------------------~~~~~~~~~---s~~~~ 52 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVA--------A--------------------------PRMAQEFGL---DVAQM 52 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHHhCC---CHHHH
Confidence 4688999999999999999998888877 5 899999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecc
Q 009563 130 GLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEP 209 (532)
Q Consensus 130 ~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 209 (532)
+++.+.+.++..+++++.|+++|| +|||+++..+.++..++.++++++++++.+++.|++.|++.+...+...+++.|+
T Consensus 53 g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 131 (406)
T PRK11551 53 GWAFSAGILGLLPGALLGGRLADR-IGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEA 131 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHH
Q 009563 210 VGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMR 286 (532)
Q Consensus 210 ~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~ 286 (532)
+|+++|++++++...+..+|..+++.++..+. +||+.|++.++..++..++..+++||+|++...+.+.++.++
T Consensus 132 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--- 208 (406)
T PRK11551 132 VGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAP--- 208 (406)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhh---
Confidence 99999999999999999999999999887665 899999998877776665666778888753211110000000
Q ss_pred HHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcCh---HHHHHHHHHHHHHHHHHHHHHHh
Q 009563 287 AIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSP---LTRIRLFLAVTINFLCSVVYYGI 363 (532)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 363 (532)
..+..++++ ..+......+.............
T Consensus 209 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (406)
T PRK11551 209 ---------------------------------------------VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWL 243 (406)
T ss_pred ---------------------------------------------hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111111 11111111111111111112222
Q ss_pred hhccccCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 009563 364 SLNVVNLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGI 440 (532)
Q Consensus 364 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (532)
+.+..+.+. ..........++.+++.++.+++.||++||+.+..+.....++.+.+....+ .+ ...+..++.+
T Consensus 244 p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~g 319 (406)
T PRK11551 244 PSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPS--FA--GMLLAGFAAG 319 (406)
T ss_pred HHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCc--HH--HHHHHHHHHH
Confidence 333333332 2334445556778899999999999999999888766666665555544332 21 3344556667
Q ss_pred HHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHHH--h----hhhhHHHHHHHHHHHHHHHHhhc
Q 009563 441 FGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVV--L----GGWLPFAVFAACGIIGGLFAFYL 510 (532)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~~--~----~~~~~~~~~~~~~~~~~~~~~~l 510 (532)
++.....+...++..|.+|++.|+++.|+.+....+|..++|.+.. . ++...++....+.+++.++.+.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 320 LFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777888899999999999999999999999999999999881 1 12333444444444444444444
No 18
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.2e-32 Score=269.90 Aligned_cols=336 Identities=14% Similarity=0.076 Sum_probs=248.5
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.+|+|+ |..+.|++.+.+.+++.+++++.|+++|| +|||+++..+.++.+++++++++++|++.+++.|+++|
T Consensus 33 ~~l~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G 108 (390)
T PRK03545 33 SDIAQSFHM---QTAQVGLMLTIYAWVVALMSLPLMLLTSN-VERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIA 108 (390)
T ss_pred HHHHhHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 899999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
++.+...+...+++.|++|+++|++++++...+.++|..+++.+++.+. +||+.|++.+++.++..++.+..+||.|
T Consensus 109 ~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 109 FAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999989999999999999999999999999999999999999998775 9999999999888777655555666643
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
+. ++ + ..++.++.++++.++......
T Consensus 189 ~~----~~-~-------------------------------------------------~~~~~~~~~~~~~~~~~~~~~ 214 (390)
T PRK03545 189 SE----HS-G-------------------------------------------------SLKSLPLLFRRPALVSLYLLT 214 (390)
T ss_pred CC----Cc-c-------------------------------------------------hHHHHHHHHhCcHHHHHHHHH
Confidence 20 00 0 001234567777665444333
Q ss_pred HHHHHHHH-HHHHHhhhccccCc---chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhcc
Q 009563 350 VTINFLCS-VVYYGISLNVVNLQ---TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNN 425 (532)
Q Consensus 350 ~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 425 (532)
+....... ...+..++.....+ ..........+++.+++.++.+++.||++||... .+..+..+....+......
T Consensus 215 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~ 293 (390)
T PRK03545 215 VVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANS 293 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhch
Confidence 33222222 22222333222222 2233444556678889999999999999987654 4444444443333222222
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHH
Q 009563 426 GIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACG 500 (532)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~ 500 (532)
.+ ...+..++.+++.....+.....+.+..| +.|+++.|+.+...++|..+||.+. ..+....+...+.+.
T Consensus 294 -~~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~ 369 (390)
T PRK03545 294 -EW--HLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALA 369 (390)
T ss_pred -HH--HHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHH
Confidence 11 34455666677666656666677778776 5789999999999899888888887 455677788888777
Q ss_pred HHHHHHHhhcc
Q 009563 501 IIGGLFAFYLP 511 (532)
Q Consensus 501 ~~~~~~~~~l~ 511 (532)
+++.++.....
T Consensus 370 ~~~~~~~~~~~ 380 (390)
T PRK03545 370 LAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHc
Confidence 77766654443
No 19
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2.1e-32 Score=271.44 Aligned_cols=387 Identities=18% Similarity=0.108 Sum_probs=261.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHH
Q 009563 51 PWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVG 130 (532)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~ 130 (532)
++++.++..+.++++...++....+.. . |.+.+++|+ |..+.|
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------------------------~~~~~~~g~---s~~~~g 61 (434)
T PRK11663 19 YWRRHILITMYLGYALFYFTRKSFNAA--------M--------------------------PEMLADLGL---SRSDIG 61 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHh--------h--------------------------HHHHHhcCC---CHHHHH
Confidence 566777777888888888887776666 4 899999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeeccc
Q 009563 131 LVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPV 210 (532)
Q Consensus 131 ~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 210 (532)
++.+.+.+++.+++++.|++.|| +|||+++.++.++.++++++++++++++.+++.|++.|++.|...+...+++.|++
T Consensus 62 ~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~ 140 (434)
T PRK11663 62 LLATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWY 140 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhC
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHH
Q 009563 211 GPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRA 287 (532)
Q Consensus 211 ~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~ 287 (532)
|+++|++++++.+.+.++|..+++.+++.+. +||+.|++.+++.++..++.++++||+|++...+...+..
T Consensus 141 ~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~------ 214 (434)
T PRK11663 141 SRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWR------ 214 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccc------
Confidence 9999999999999999999999999888776 9999999988887766656666778876432100000000
Q ss_pred HHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccch-hhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009563 288 IAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSV-IDVIKSPLTRIRLFLAVTINFLCSVVYYGISLN 366 (532)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (532)
++.++...+... ...+.+..+ ...++++..+....................+.+
T Consensus 215 -----------------~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 269 (434)
T PRK11663 215 -----------------HDALELAQQQEG--------AGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLY 269 (434)
T ss_pred -----------------ccccccchhccc--------cCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000 000000011 124566655544333333333222222223333
Q ss_pred c-ccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhh--CCchhH-HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 009563 367 V-VNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKL--GRKPMT-IGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMG 439 (532)
Q Consensus 367 ~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~--gr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (532)
+ ...+.+ .........++.+++.++.|++.||+ ++|+.. ........+....+......... ......+..
T Consensus 270 l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 347 (434)
T PRK11663 270 MSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYV--MQAACFFTI 347 (434)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHH--HHHHHHHHH
Confidence 3 333332 23334455677889999999999998 333332 22221222222222222222211 122222223
Q ss_pred HHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHh
Q 009563 440 IFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAF 508 (532)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 508 (532)
+++.............|.+|++.|+++.|+.++..++|++++|.+. ..++...|++.+++.+++++..+
T Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 348 GFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 3322222233445678999999999999999999999999998777 45677788888888777666554
No 20
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.7e-32 Score=272.71 Aligned_cols=356 Identities=16% Similarity=0.210 Sum_probs=253.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhh
Q 009563 48 EFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKY 127 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~ 127 (532)
+.+++|+..+..++++++.++++.....+. . |.+.+++|+ |+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------------------------~~i~~~~~~---s~~ 53 (426)
T PRK12307 11 EITRPQKNALFSAWLGYVFDGFDFMLIFYI--------M--------------------------YLIKADLGL---TDM 53 (426)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhHHHHHHHH--------H--------------------------HHHHHHhCC---CHH
Confidence 345788888899999999999998888777 5 899999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheee
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLAT 207 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 207 (532)
+.+++.+++.+++.+++++.|+++|| +|||+++.++.++.++++++++++++++.++++|+++|++.+...+....++.
T Consensus 54 ~~~~~~~~~~~~~~l~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~ 132 (426)
T PRK12307 54 EGAFLATAAFIGRPFGGALFGLLADK-FGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAV 132 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHH
Q 009563 208 EPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKI 284 (532)
Q Consensus 208 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~ 284 (532)
|++|+++|+++.++...+..+|.++++.+.+.+. +||+.|++..+..++.. ......||++++...+
T Consensus 133 ~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~-~~~~~~p~~~~~~~~~--------- 202 (426)
T PRK12307 133 ESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVI-YIRARAPESKEWEEAK--------- 202 (426)
T ss_pred HhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHH-HHHHHCCCChHHHHhh---------
Confidence 9999999999999999999999999998887765 99999988654433322 2222344443211000
Q ss_pred HHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHH---HHHHH
Q 009563 285 MRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLC---SVVYY 361 (532)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 361 (532)
.+.++ + ..++. .+.....++++++++.++............. .....
T Consensus 203 ------~~~~~-----------~------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (426)
T PRK12307 203 ------LSGKG-----------K------HSQSA-------WSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFG 252 (426)
T ss_pred ------hhccc-----------c------ccccc-------hhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 00000 0001124566777776554333222211111 11122
Q ss_pred HhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 009563 362 GISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVM 438 (532)
Q Consensus 362 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (532)
..+.+....+.+ .........++.+++.++.+++.||++||+.+..+.++..+..+.+........ ..+...+
T Consensus 253 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 328 (426)
T PRK12307 253 LLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNY----LLLGACL 328 (426)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccH----HHHHHHH
Confidence 233333333332 223334556778889999999999999999888887776666554443332221 1122222
Q ss_pred HHH--HHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 439 GIF--GVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 439 ~~~--~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
.+. ...+..+....++.|.+|++.|+++.|+.+....+++.++|.+.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~ 377 (426)
T PRK12307 329 FGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAA 377 (426)
T ss_pred HHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHH
Confidence 222 22233345667788999999999999999999999999999887
No 21
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=5.4e-32 Score=268.41 Aligned_cols=376 Identities=18% Similarity=0.214 Sum_probs=250.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCC-ceeecc--cccchhhhH
Q 009563 52 WQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGS-STVTQW--GLFCEEKYK 128 (532)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~--~~~~~s~~~ 128 (532)
++++.+...+++++++.+|....++. . | .+.+++ ++ ++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~--------~--------------------------~~~~~~~~~~~~---~~~- 60 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGIT--------A--------------------------ALVFNREFFPQV---SPA- 60 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHHhcCCCC---CcH-
Confidence 45667788888999999999988876 2 3 244444 45 444
Q ss_pred HHHHH-----HHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHH--------HHHHHHHHHHhhc
Q 009563 129 VGLVQ-----ALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYS--------TYVVLRMLTGFST 195 (532)
Q Consensus 129 ~~~~~-----s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~ 195 (532)
.+++. ++.+++..+++++.|+++|| +|||+++.++.++++++++++++++++. .+++.|+++|++.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~ 139 (438)
T PRK09952 61 MGTLAAFATFGVGFLFRPLGGVVFGHFGDR-LGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAV 139 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34443 35567788999999999999 9999999999999999999999999987 5889999999999
Q ss_pred cccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh----------h-chHHHHHHHHHHHHHHHHHHhcc
Q 009563 196 GGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF----------Q-TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 196 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l----------~-~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
|...+....++.|++|+++|++..+....+..+|.+++..+...+ . +||+.|++.+++.++.. .....
T Consensus 140 g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~-~l~~~ 218 (438)
T PRK09952 140 GGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL-WVRNG 218 (438)
T ss_pred cccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH-HHHHh
Confidence 999999999999999999999999999999999998887665432 1 89999999887765533 44556
Q ss_pred cccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHH
Q 009563 265 LPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRI 344 (532)
Q Consensus 265 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (532)
.||+|++...+++.++. + ......+.+++++..+.
T Consensus 219 ~~es~~~~~~~~~~~~~----------------------------------~-----------~~~~~~~~l~~~~~~~~ 253 (438)
T PRK09952 219 MEESAEFEQQQHEQAAA----------------------------------K-----------KRIPVIEALLRHPGAFL 253 (438)
T ss_pred CCCChhHHHHHhhcccc----------------------------------c-----------ccCCHHHHHHHchHHHH
Confidence 77877542111000000 0 00001112344444333
Q ss_pred HHHHHHHH-HHHHH-HHHHHhhhccccCcchHH---HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHH
Q 009563 345 RLFLAVTI-NFLCS-VVYYGISLNVVNLQTNLY---LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLG 419 (532)
Q Consensus 345 ~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~ 419 (532)
........ .+... ...+...+.....+.+.. ......++..+++.++.|+++||++||+.+..+.++..++.+.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~ 333 (438)
T PRK09952 254 KIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPF 333 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 32211111 11111 112222222222222221 22333455567788899999999999998887766655544333
Q ss_pred Hhhh-ccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHH-HHHHHHHHHH----H-hh--hh
Q 009563 420 SLVK-NNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQ-LGAILAPFVV----V-LG--GW 490 (532)
Q Consensus 420 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~-~g~~i~p~~~----~-~~--~~ 490 (532)
.... ...... ..++..++.+++.+...+..++++.|.+|++.|+++.|+.+.... +|+.++|.+. . .+ +.
T Consensus 334 ~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~ 412 (438)
T PRK09952 334 FMALEAQSIFW-IVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWH 412 (438)
T ss_pred HHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCch
Confidence 3221 212111 233344555667677778888999999999999999999776654 7888888777 1 11 34
Q ss_pred hHHHHHHHHHHHHHHHHhhccCC
Q 009563 491 LPFAVFAACGIIGGLFAFYLPET 513 (532)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~l~~~ 513 (532)
..+...+++.+++.+..+.++|+
T Consensus 413 ~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 413 SVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHcccc
Confidence 55666666677776666666654
No 22
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=7e-32 Score=269.14 Aligned_cols=399 Identities=16% Similarity=0.113 Sum_probs=259.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHH
Q 009563 50 GPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKV 129 (532)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~ 129 (532)
.+++|.++..+++.......+....++. . |.+.++ |+ +..+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------------------------p~l~~~-g~---s~~~~ 65 (452)
T PRK11273 24 RRLRWQIFLGIFFGYAAYYLVRKNFALA--------M--------------------------PYLVEQ-GF---SRGDL 65 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh--------h--------------------------HHHHHc-CC---CHHHH
Confidence 3556777776777777767776655555 3 777877 99 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc----hHHHHHHHHHHHHhhccccchhhhhe
Q 009563 130 GLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP----NYSTYVVLRMLTGFSTGGVGLCAFVL 205 (532)
Q Consensus 130 ~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~ 205 (532)
+++.+.+.++++++++++|+++|| +|||+++.++.++.+++.+++++++ +++.+++.|++.|++.+...+.....
T Consensus 66 g~~~~~~~i~~~~~~~~~G~l~Dr-~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~ 144 (452)
T PRK11273 66 GFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRT 144 (452)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhc-cCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHH
Confidence 999999999999999999999999 9999999999999999999888763 78889999999999999988888888
Q ss_pred eecccCCCchhHHHHHHHHHHHHHHH-HHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHH
Q 009563 206 ATEPVGPSKRGAAGMSTFYFFSTGIA-LLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEA 281 (532)
Q Consensus 206 i~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~ 281 (532)
+.|++|+++|++++++...+.++|.. .+++++..+. +||+.|++.+++.++..++..+++||+|+....+++ ++.
T Consensus 145 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~ 223 (452)
T PRK11273 145 MVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPI-EEY 223 (452)
T ss_pred HHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCCh-hhh
Confidence 89999999999999999999998864 4555433322 999999999888887776777888888753211110 000
Q ss_pred HHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccc-hhhhhcChHHHHHHHHHHHHHHHHHHHH
Q 009563 282 MKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGS-VIDVIKSPLTRIRLFLAVTINFLCSVVY 360 (532)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (532)
+ ++ .++ +. ..++.+ +.+.+.. .+.+++++.++...+...+.........
T Consensus 224 ~-------~~----~~~----------~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 273 (452)
T PRK11273 224 K-------ND----YPD----------DY-NEKHEQ--------ELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGIL 273 (452)
T ss_pred h-------hc----ccc----------cc-ccccCC--------CccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 000 00 000000 0000011 1235677776665555545444433333
Q ss_pred HHhhhcccc-Ccch---HHHHHHHHHHHHHHHHHHHHHHHhhh--CCchhH-HHHHHHHHHHHHHHHhhhccchhHHHHH
Q 009563 361 YGISLNVVN-LQTN---LYLNVLVNAVAEMPAFTITAVLLDKL--GRKPMT-IGTLWFSGFFCLLGSLVKNNGIWKIVRM 433 (532)
Q Consensus 361 ~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~--gr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (532)
...|.++.+ .+.+ .........++.+++.++.|+++||+ +||... .....+..++.+.+......... ...
T Consensus 274 ~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~ 351 (452)
T PRK11273 274 DWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPT--VDM 351 (452)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChH--HHH
Confidence 344444433 2322 23334455567778999999999998 444432 22223333333332222222221 222
Q ss_pred HHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHH-HHHHH-----HhhhhhHHHHHHHHHHHHHHHH
Q 009563 434 ICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAIL-APFVV-----VLGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i-~p~~~-----~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
+..+..+............+..|.+|++.||++.|+.+....+|+.+ +|.+. ..++...|++.++++++++++.
T Consensus 352 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~ 431 (452)
T PRK11273 352 ACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL 431 (452)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 33333333332323334456779999999999999999988887654 67665 4567778888888777777766
Q ss_pred hhccCCCCCChhh
Q 009563 508 FYLPETLNKPLYD 520 (532)
Q Consensus 508 ~~l~~~~~~~~~~ 520 (532)
.++....+|+.||
T Consensus 432 ~~~~~~~~~~~~~ 444 (452)
T PRK11273 432 IVVMIGEKRHHEE 444 (452)
T ss_pred HHHhccccchHHH
Confidence 5554443444333
No 23
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.1e-31 Score=270.35 Aligned_cols=392 Identities=13% Similarity=0.018 Sum_probs=276.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHHHH
Q 009563 53 QLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVGLV 132 (532)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~~~ 132 (532)
+|..+..++++.++...|..+.+.. . |++.+|+|. +..+.+|+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a--------~--------------------------p~i~~~l~~---s~~~~~~~ 46 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVA--------A--------------------------PTLSMTLGA---SGNELLWI 46 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHHhCC---CHhHHHHH
Confidence 5778899999999999999988887 5 999999999 99999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeeccc-C
Q 009563 133 QALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPV-G 211 (532)
Q Consensus 133 ~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~ 211 (532)
.+.|.++..++.+++|+++|| +|||+++.++.+++.++++++++++|++.++++|+++|+|.+...+.....+.+++ |
T Consensus 47 ~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~ 125 (495)
T PRK14995 47 IDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTE 125 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999 99999999999999999999999999999999999999999998888888787765 6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHH----
Q 009563 212 PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKI---- 284 (532)
Q Consensus 212 ~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~---- 284 (532)
+++|++++++......+|..+||.+++.+. +|||.|++...+.++..++..+++|+.|+....+.+.......
T Consensus 126 ~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~ 205 (495)
T PRK14995 126 EKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAI 205 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHH
Confidence 789999999999999999999999999987 9999999998888777767777788765321111111111000
Q ss_pred HHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 285 MRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGIS 364 (532)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (532)
........................-.. ...-..-...+.+...+.-..++++++.+....+..+..........+..+
T Consensus 206 ~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (495)
T PRK14995 206 LLLVYSAKTALKGFLSLWVTSLTLLTG--ALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMA 283 (495)
T ss_pred HHHHHHHHhccccCCchHHHHHHHHHH--HHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000000000000000000 000000000000011111224678888766555544444444333333444
Q ss_pred hcccc-Ccc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 009563 365 LNVVN-LQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGI 440 (532)
Q Consensus 365 ~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (532)
.+++. .+. ..........++..++.++.|++.||+|+|+.+..+.++..++...+.........+ ......++.+
T Consensus 284 ~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~~~~~~~l~G 362 (495)
T PRK14995 284 QELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQW-QAWGLMALLG 362 (495)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchH-HHHHHHHHHH
Confidence 44332 222 334445556677888999999999999999988888887777766655443222222 3455677788
Q ss_pred HHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 441 FGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
++.+...+.....+.+..|++.++.+.++.++...+|+.+|+.+.
T Consensus 363 ~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~ 407 (495)
T PRK14995 363 FSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIF 407 (495)
T ss_pred HhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888888999999999999999999999999888776
No 24
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-34 Score=262.56 Aligned_cols=426 Identities=20% Similarity=0.310 Sum_probs=301.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhh
Q 009563 48 EFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKY 127 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~ 127 (532)
...|++...+.+...+.+.+++|.++++.. . .+.. +.|-+ .....=++ .+.
T Consensus 34 g~qw~~fk~i~iAG~GfftDsYDlF~I~lV--------t------------~il~--~lY~~----~~~~~g~~---ps~ 84 (538)
T KOG0252|consen 34 GLQWKHFKAIIIAGMGFFTDSYDLFSISLV--------T------------KILG--YLYYH----GDESGGHY---PSG 84 (538)
T ss_pred chhHHHHHHHHHhhhhhcccchhhhhHHHH--------H------------HHHH--HHhcC----CCCCCCcC---Cch
Confidence 456788888888899999999999888877 1 0000 00000 00011123 556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc-------hHHHHHHHHHHHHhhccccch
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP-------NYSTYVVLRMLTGFSTGGVGL 200 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~ 200 (532)
..+.+..+..+|.++||++.|+++|| +|||+++...+++..+++++++++. -..++.+.|++.|+|.|+-+|
T Consensus 85 i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYP 163 (538)
T KOG0252|consen 85 VLALVNAAALVGTIFGQLFFGWLGDK-FGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYP 163 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-hcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCc
Confidence 78889999999999999999999999 9999999999999999999888763 257899999999999999999
Q ss_pred hhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh------------------chHHHHHHHHHHHHHHHHHHh
Q 009563 201 CAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ------------------TWRALYIASSIPSILFLLIIL 262 (532)
Q Consensus 201 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~------------------~wr~~f~~~~~~~~~~~~~~~ 262 (532)
.+.++.+|...++.||...+...+..++|.+.|.+++..+. =||..|.+..+++++.. ...
T Consensus 164 lSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l-y~R 242 (538)
T KOG0252|consen 164 LSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL-YFR 242 (538)
T ss_pred chHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 99999999999999999999888888888877777665543 49999999999988877 788
Q ss_pred cccccCchhHhhcC-CHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChH
Q 009563 263 PFLPESPRWYLVRG-KLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPL 341 (532)
Q Consensus 263 ~~~~esp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (532)
+.+|||+++-.... +.+.+. ++..+..+.+.+. ++.. .......+.....+...+..+
T Consensus 243 l~M~Et~~Y~al~~~~~~~a~-------~d~~k~~~~~~~~----~~~~---------~~~~~~~~~~~~~F~~~f~~~- 301 (538)
T KOG0252|consen 243 LKMPETARYTALVSKKLKQAA-------GDMKKVLSVDIEA----ESTA---------ESDVPPPSNSFGLFSRLFLRW- 301 (538)
T ss_pred hcCCcchhHHHHhhcCHhhhh-------hccccccccccch----hhcc---------ccCCCCcccccchHHHHHHHH-
Confidence 89999998753222 212211 1111111110000 0000 000000111112233344333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCc--------chHH--------HHHHHHHHHHHHHHHHHHHHHhhhCCchhH
Q 009563 342 TRIRLFLAVTINFLCSVVYYGISLNVVNLQ--------TNLY--------LNVLVNAVAEMPAFTITAVLLDKLGRKPMT 405 (532)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~--------~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~ 405 (532)
.-+.++.....|+...+.+|...++....- .+.+ ...++...+.++|..+..+++|++|||+..
T Consensus 302 hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq 381 (538)
T KOG0252|consen 302 HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHH
Confidence 335677778888888888877766543321 1111 122333345566888888999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccchh-HHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 009563 406 IGTLWFSGFFCLLGSLVKNNGIW-KIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFV 484 (532)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~ 484 (532)
+.+++++.+..+.+....++... ....+...+...++..+.......+.+|.+|.+.|++..|+....+.+|++++...
T Consensus 382 ~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~ 461 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFG 461 (538)
T ss_pred HhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHH
Confidence 99999999999998887662111 10222233333445556666888999999999999999999999999999998877
Q ss_pred H----------HhhhhhHHHHHHHHHHHHHHHHhhccCCCCCChhhhHHhh
Q 009563 485 V----------VLGGWLPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGM 525 (532)
Q Consensus 485 ~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 525 (532)
+ ..+....+++++++.+++.++.+++||+++|+++|..++.
T Consensus 462 F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei~~e~ 512 (538)
T KOG0252|consen 462 FLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLEEISNEE 512 (538)
T ss_pred hhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHHHhcChh
Confidence 6 2346778999999999999999999999999998875443
No 25
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.4e-31 Score=263.01 Aligned_cols=367 Identities=19% Similarity=0.245 Sum_probs=255.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhh
Q 009563 48 EFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKY 127 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~ 127 (532)
..++++|+.+..++++++.++++....+.. . |.+++++|+ +..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------------------------~~l~~~~~~---s~~ 47 (405)
T TIGR00891 5 HLTRAQWNAFSAAWLGWLLDAFDFFLVALV--------L--------------------------AEVAGEFGL---TTV 47 (405)
T ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHHhCC---Chh
Confidence 356789999999999999999999888887 5 899999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheee
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLAT 207 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 207 (532)
+.+++.+++.++..+++++.|.++|| +|||+++.++.++.++++++++++++++.+++.|++.|++.+...+...+++.
T Consensus 48 ~~g~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~ 126 (405)
T TIGR00891 48 DAASLISAALISRWFGALMFGLWGDR-YGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVI 126 (405)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---c--hHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHH
Q 009563 208 EPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---T--WRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAM 282 (532)
Q Consensus 208 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~--wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 282 (532)
|++|+++|+++.++...+..+|..+++.+++.+. + ||+.|++.+++.++.. +....+||++++...+++.++..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 205 (405)
T TIGR00891 127 ESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALVR 205 (405)
T ss_pred HhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhhh
Confidence 9999999999999999999999999999888765 4 9999998766665544 55667788765432211111111
Q ss_pred HHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHH----HHHHHHHH
Q 009563 283 KIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAV----TINFLCSV 358 (532)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 358 (532)
+..++..+. + +. .++..+ ......++..+. .+..+.... +.......
T Consensus 206 ~~~~~~~~~--~------------~~------~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 256 (405)
T TIGR00891 206 TMVDILYGG--E------------HR------IANIVM-------TLAAAMVQSAGK--RWPTFVYLVVLVLFANLYSHP 256 (405)
T ss_pred hHHHHHhcc--c------------hh------hhhhhh-------hhhHHhhhhhhh--hhHHHHHHHHHHHHHHHHHhh
Confidence 101000000 0 00 000000 000001111111 111111111 11111111
Q ss_pred HHHHhhhcc-ccCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHH
Q 009563 359 VYYGISLNV-VNLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMI 434 (532)
Q Consensus 359 ~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (532)
.....+.+. ...+. ..........++.+++.++.+++.||++||+.+..+..+..+..+...... ...+ ...+
T Consensus 257 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~ 333 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG-ANVA--VLGL 333 (405)
T ss_pred hhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC-CchH--HHHH
Confidence 111122222 22222 223334556677889999999999999999988877765543333222222 2211 2333
Q ss_pred HHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 435 CGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
..++.++......+....++.|.+|++.|+++.|+.+....+|+.++|.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~ 384 (405)
T TIGR00891 334 GLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIG 384 (405)
T ss_pred HHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHH
Confidence 334455555566677788899999999999999999999999999999887
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=7e-31 Score=257.00 Aligned_cols=341 Identities=12% Similarity=0.057 Sum_probs=241.7
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+++|+|+ |..+.|++.+.+.+++.+++++.|+++|| +|||+++..+.++++++.++++++++++.++++|+++|
T Consensus 33 p~i~~~~~~---s~~~~g~~~s~~~~~~~l~~~~~g~l~dr-~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~G 108 (393)
T PRK09705 33 PQLRQASGM---SFSVAALLTALPVVTMGGLALAGSWLHQH-VSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGG 108 (393)
T ss_pred HHHHHHhCC---CHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHH
Confidence 899999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhccc-cc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFL-PE 267 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~-~e 267 (532)
++.+...+....++.+++| ++|+++++++..+..+|..+++.+++.+. +||+.+.+.++..++.. +.++.. ++
T Consensus 109 ig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~ 186 (393)
T PRK09705 109 VGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVAL-FAWWWQSAR 186 (393)
T ss_pred hHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HHHHHHhcC
Confidence 9999999999999999987 78999999999999999999988887764 79998877666554433 222222 11
Q ss_pred CchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHH
Q 009563 268 SPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLF 347 (532)
Q Consensus 268 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (532)
.|+ ++ + ++ +...++.++++..+...+
T Consensus 187 ~~~-----~~------------------------------~-------~~------------~~~~~~~l~~~~~~~l~~ 212 (393)
T PRK09705 187 EVA-----SS------------------------------H-------KT------------TTTPVRVVFTPRAWTLGV 212 (393)
T ss_pred CCc-----cc------------------------------c-------CC------------CcCCcccccCHhHHHHHH
Confidence 110 00 0 00 001122334554443333
Q ss_pred HHHHHHHHHHHHHHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhc
Q 009563 348 LAVTINFLCSVVYYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKN 424 (532)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~ 424 (532)
...+............+.+..+.+.+ ........+++.+++.++.+++.||++||+.+..+..+..++..++...+.
T Consensus 213 ~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~ 292 (393)
T PRK09705 213 YFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL 292 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc
Confidence 33222222222222223333333322 334455667788899999999999999999888887777766665543333
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHhhhcccccc-chhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh-hhhHHHHHH
Q 009563 425 NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFP-TVVRNAALGCATQAAQLGAILAPFVV-----VLG-GWLPFAVFA 497 (532)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~-~~~~~~~~~ 497 (532)
... . ....+.+++.+..++.......+..+ ++.+++..|+.+....+++.++|.+. ..| +...|.+.+
T Consensus 293 ~~~---~--~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~ 367 (393)
T PRK09705 293 QLP---V--LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHA 367 (393)
T ss_pred hHH---H--HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHH
Confidence 211 1 12234566666777766666667664 67899999999999999999999887 333 455566666
Q ss_pred HHHHHHHHHH-hhccCCCCCCh
Q 009563 498 ACGIIGGLFA-FYLPETLNKPL 518 (532)
Q Consensus 498 ~~~~~~~~~~-~~l~~~~~~~~ 518 (532)
++.++..+.. .+.||+++|..
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 368 LCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHHHHHHHHHHhccccccchh
Confidence 6665555443 45577665543
No 27
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=6.2e-32 Score=264.51 Aligned_cols=337 Identities=15% Similarity=0.091 Sum_probs=246.8
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.+++|+ |..+.|++.+++.+++.++++++|+++|| +|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus 27 ~~~~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~G~l~d~-~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 102 (377)
T TIGR00890 27 PPLGRYFGV---GVTAVAIWFTLLLIGLAMSMPVGGLLADK-FGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLAS 102 (377)
T ss_pred HHHHHHhCC---CHHHHHHHHHHHHHHHHHHhhhhHHHHHH-cCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
++.+...+.....+.+++| ++|+++.++...+.++|..+++.+.+.+. +||+.|++.+++.++..+..+++++++|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (377)
T TIGR00890 103 AGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPP 181 (377)
T ss_pred HHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCc
Confidence 9999888888888889886 67999999999999999887655554443 8999999999988887766666666644
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
+... + ++ + +.+ ......++.++++..+......
T Consensus 182 ~~~~---~----------------~~--~----------------~~~----------~~~~~~~~~~~~~~~~~~~~~~ 214 (377)
T TIGR00890 182 GQLI---K----------------TN--I----------------EVS----------VKDYTVWEMLRTPQFWVLYLSF 214 (377)
T ss_pred hhcc---c----------------cC--c----------------ccc----------hhhhhHHHHHcCccHHHHHHHH
Confidence 2100 0 00 0 000 0001234566666555433333
Q ss_pred HHHHHHHHHHHHHhhhccccCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccc
Q 009563 350 VTINFLCSVVYYGISLNVVNLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNG 426 (532)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (532)
+...+.........+.+.++.+. ..........++.+++.++.+++.||++||+.+..+..+..++.+.+...+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T TIGR00890 215 FLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLN 294 (377)
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccch
Confidence 32222221111111222222222 223344556677888999999999999999999888888887777666554332
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHH
Q 009563 427 IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGI 501 (532)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~ 501 (532)
.. ..+...++.+++.+...+....+..|.+|+++|+++.|+.+....+|+.++|.+. ..++...|.+.+++.+
T Consensus 295 ~~--~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~ 372 (377)
T TIGR00890 295 DV--LFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFAL 372 (377)
T ss_pred hH--HHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHH
Confidence 21 2333445556666666677778899999999999999999999999999999876 3456667777666655
Q ss_pred HH
Q 009563 502 IG 503 (532)
Q Consensus 502 ~~ 503 (532)
++
T Consensus 373 ~~ 374 (377)
T TIGR00890 373 TS 374 (377)
T ss_pred Hh
Confidence 54
No 28
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=8.4e-31 Score=258.51 Aligned_cols=376 Identities=24% Similarity=0.352 Sum_probs=265.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhh
Q 009563 48 EFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKY 127 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~ 127 (532)
+..+++|+.+..+.+..+..+++.....+. . |.+.+++|. +..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------------------------~~~~~~~~~---~~~ 52 (398)
T TIGR00895 10 PLSRYQWRAIILSFLIMLMDGYDLAAMGFA--------A--------------------------PAISAEWGL---DPV 52 (398)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHhh--------H--------------------------HHHhhccCC---CHH
Confidence 345677888888888888888887766666 4 889999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheee
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLAT 207 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 207 (532)
+.+++.+.+.++..++.++.|+++|| +|||+.+..+.++.+++.++..++++++.+++.|++.|++.+...+...+++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 131 (398)
T TIGR00895 53 QLGFLFSAGLIGMAFGALFFGPLADR-IGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVS 131 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHH
Q 009563 208 EPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKI 284 (532)
Q Consensus 208 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~ 284 (532)
|++|+++|+++.++...+..+|..+++.+++.+. +||+.|++.++..++..++.++++||++++...+ +.++..+.
T Consensus 132 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 210 (398)
T TIGR00895 132 EYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRI 210 (398)
T ss_pred HHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHH
Confidence 9999999999999999999999999999988876 9999999987777666667777889988765444 33333333
Q ss_pred HHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHH---HHHHHHHHHHHHH
Q 009563 285 MRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFL---AVTINFLCSVVYY 361 (532)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 361 (532)
.++....+..+..++ . .+ +.. ..+..+...+.+++++..+..... .............
T Consensus 211 ~~~~~~~~~~~~~~~----~---~~----~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (398)
T TIGR00895 211 VNAIAPQMQAEAQSA----L---PE----QKA--------TQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTN 271 (398)
T ss_pred HHHHHHhcccccccc----c---cc----ccc--------ccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333322111100000 0 00 000 000000112223333222211111 1111111111222
Q ss_pred HhhhccccCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 009563 362 GISLNVVNLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVM 438 (532)
Q Consensus 362 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (532)
..+......+. ..........++.+++.++.+++.||++||+... ...+..+...++...... .+ ...+..++
T Consensus 272 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~ 347 (398)
T TIGR00895 272 WLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTAL-LLLLGAVFAVLVGSTLFS-PT--LLLLLGAI 347 (398)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHHHHHHHHHHhhC-HH--HHHHHHHH
Confidence 22333333222 2333445556778899999999999999984443 333333333333332222 21 44566677
Q ss_pred HHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 439 GIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
.+++.+...+...+++.|.+|++.|+++.|+.+....+|..++|.+.
T Consensus 348 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 394 (398)
T TIGR00895 348 AGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILA 394 (398)
T ss_pred HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 88888888899999999999999999999999999999999999875
No 29
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=3.2e-31 Score=265.17 Aligned_cols=378 Identities=12% Similarity=0.075 Sum_probs=251.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhh
Q 009563 48 EFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKY 127 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~ 127 (532)
++.+.+++.+...++..+...++....... . |.+.+|+|+ +..
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------------------------~~l~~~~gl---s~~ 71 (476)
T PLN00028 29 SFARPHMRAFHLSWISFFTCFVSTFAAAPL--------L--------------------------PIIRDNLNL---TKS 71 (476)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHHcCC---CHH
Confidence 455566777777777777777766555554 3 889999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheee
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLAT 207 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 207 (532)
+.+++.+.+.+++.+++++.|+++|| +|||+++..+.++++++.++++++++++.+++.|++.|++.+... ....++.
T Consensus 72 ~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~ 149 (476)
T PLN00028 72 DIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMS 149 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHH
Confidence 99999999999999999999999999 999999999999999999999999999999999999999988654 4566789
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh------------hchHHHHHHHHHHHHHHHHHHhcccccCchhHhhc
Q 009563 208 EPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF------------QTWRALYIASSIPSILFLLIILPFLPESPRWYLVR 275 (532)
Q Consensus 208 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l------------~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~ 275 (532)
|++|+++|++++++.....++|..+++.+...+ .|||+.|++.+++.++..++.+++.++.|+.
T Consensus 150 ~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~---- 225 (476)
T PLN00028 150 TMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDG---- 225 (476)
T ss_pred HhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCC----
Confidence 999999999999998877777776665544332 1799999999998887775555444444421
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHH
Q 009563 276 GKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFL 355 (532)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (532)
+.++.+ .+. +.+ +.+....+++.++++..+...+..+.....
T Consensus 226 -~~~~~~--------~~~--------------------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (476)
T PLN00028 226 -NYRELK--------KSG--------------------TMP---------KDSFSKVLRYGVTNYRTWILALTYGYSFGV 267 (476)
T ss_pred -chhhHH--------hcC--------------------ccc---------cccHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 000000 000 000 000011345566776655433332222221
Q ss_pred HH-HHHHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCch-------hHHHHHHHHHHHHHHHHhhhc
Q 009563 356 CS-VVYYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKP-------MTIGTLWFSGFFCLLGSLVKN 424 (532)
Q Consensus 356 ~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~-------~~~~~~~~~~~~~~~~~~~~~ 424 (532)
.. ...+...+.....+.+ .........++.+++.++.|+++||++||+ .......+.++.++++....
T Consensus 268 ~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~- 346 (476)
T PLN00028 268 ELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN- 346 (476)
T ss_pred HHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc-
Confidence 11 1112222222222322 233444556778899999999999998652 22222222223222222222
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHh----hhhhHHHHHHHHH
Q 009563 425 NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVL----GGWLPFAVFAACG 500 (532)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~~~----~~~~~~~~~~~~~ 500 (532)
... ...+..++.+++.....+..+++..+..| +.++++.|+.+..+.+|++++|.+... ++...|++.+++.
T Consensus 347 -~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~ 422 (476)
T PLN00028 347 -SLG--AAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMI 422 (476)
T ss_pred -hHH--HHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHH
Confidence 111 23344455555555566666777777654 689999999999888999999988732 3667888888888
Q ss_pred HHHHHHHhhcc
Q 009563 501 IIGGLFAFYLP 511 (532)
Q Consensus 501 ~~~~~~~~~l~ 511 (532)
+++.++.++++
T Consensus 423 ~i~~~~~~~~~ 433 (476)
T PLN00028 423 IACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHhee
Confidence 88877776653
No 30
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=3.9e-38 Score=315.45 Aligned_cols=380 Identities=29% Similarity=0.523 Sum_probs=273.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc---hHHHHHHHHHHHHhhccccchh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP---NYSTYVVLRMLTGFSTGGVGLC 201 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~ 201 (532)
+..+.+++.+...+|..+|+++.|.++|| +|||+.+.++.++..+++++.++++ +++.+.++|++.|++.|...+.
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~-~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~ 122 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADR-YGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVV 122 (451)
T ss_pred hHHHHHHHHHHHHhhhccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45678999999999999999999999999 9999999999999999999999999 9999999999999999999999
Q ss_pred hhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---c---hHHHHHHHHHHHHHHHHHHhcccccCchhHhhc
Q 009563 202 AFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---T---WRALYIASSIPSILFLLIILPFLPESPRWYLVR 275 (532)
Q Consensus 202 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~---wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~ 275 (532)
...++.|..|+++|++..++.+.+..+|..++..++..+. + ||+.+++.++++++.. +..+++||||+|+..+
T Consensus 123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~-~~~~~~pESP~wL~~~ 201 (451)
T PF00083_consen 123 SPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVL-LLRFFLPESPRWLLSK 201 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccceeccc
Confidence 9999999999999999999999999999998888765543 4 9999999999988766 6778999999999999
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHH
Q 009563 276 GKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFL 355 (532)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (532)
+|.+++++.++++++.+..+ ++.....++.+ +.++.+..++++++++..++...........
T Consensus 202 ~~~~~A~~~l~~~~~~~~~~--~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 263 (451)
T PF00083_consen 202 GRDEEAEKVLRKLRGKEIED--EEIEEIKAEKK----------------ESQESKASWRDLFRNKKYRKRLLIALLLQFF 263 (451)
T ss_pred cccccccccccccccccccc--ccccccccccc----------------cccccceeeeecccccccccccccccccccc
Confidence 99999998887753221100 00000000000 0000013556666665433333333333322
Q ss_pred H-----HHHHHHhhhccccCcchH-HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHH--h-hhccc
Q 009563 356 C-----SVVYYGISLNVVNLQTNL-YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGS--L-VKNNG 426 (532)
Q Consensus 356 ~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~--~-~~~~~ 426 (532)
. ....+..+......+.+. ........+..+++.+++.++.||+|||++++.+..+++++.+.+. . .....
T Consensus 264 ~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (451)
T PF00083_consen 264 QQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSS 343 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2 112222232333322222 2333445566777888888999999999999999888888877775 1 11111
Q ss_pred h--hHHHHHHHHHHHHHHHH-hhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHH
Q 009563 427 I--WKIVRMICGVMGIFGVA-GTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAA 498 (532)
Q Consensus 427 ~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~ 498 (532)
. +....++...+..+..+ +..+..+.+..|.+|++.|+++.|+....++++++++|.+. ..+....+.++++
T Consensus 344 ~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~ 423 (451)
T PF00083_consen 344 SSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAG 423 (451)
T ss_pred ccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHH
Confidence 0 01022222222222222 45577789999999999999999999999999998888776 2333556677776
Q ss_pred HHHHHHHH-HhhccCCCCCChhhhHHh
Q 009563 499 CGIIGGLF-AFYLPETLNKPLYDTMAG 524 (532)
Q Consensus 499 ~~~~~~~~-~~~l~~~~~~~~~~~~~~ 524 (532)
+.++..++ .+++|||++++++|.+++
T Consensus 424 ~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 424 VCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred HHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 66665554 478899999999987654
No 31
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=4.3e-31 Score=260.48 Aligned_cols=362 Identities=17% Similarity=0.187 Sum_probs=251.5
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.+++|+ +..+.+++.+++.++..++.++.|+++|| +|||+++..+.++.+++.++++++++++.++++|++.|
T Consensus 18 ~~~~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 93 (399)
T TIGR00893 18 PMLQEDLGL---SAAQYGYVFSAFSWGYVVGQFPGGWLLDR-FGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLG 93 (399)
T ss_pred HHHHHhhCC---ChhhHHHHHHHHHHHHHHHHHhHHHHHHh-cCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 789999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
++.+...+....++.|++|+++|++.+++......+|..+++.+++.+. +||+.|++.+++.++..++.+++.||+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 94 AAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCC
Confidence 9999999999999999999999999999999999999999999998765 9999999999888877766666777765
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
+.... .+.++.....++. .. +. +.++..+..+...++.++++.++...+..
T Consensus 174 ~~~~~-~~~~~~~~~~~~~--------~~---------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (399)
T TIGR00893 174 QKAKW-LTEEEKYIVVGGL--------LA---------------EQ-----QGKGPSTPKKYQIKELLKDRRVWGLALGQ 224 (399)
T ss_pred Ccccc-CCHHHHhhcchhh--------cc---------------cc-----ccccccCCCccchHHHhcCHHHHHHHHHH
Confidence 32100 0111000000000 00 00 00001112223566778888766655555
Q ss_pred HHHHHHHHHHHHHhhhcccc-Ccc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchh--HHHHHH--HHHHHHHHHHh
Q 009563 350 VTINFLCSVVYYGISLNVVN-LQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPM--TIGTLW--FSGFFCLLGSL 421 (532)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~--~~~~~~--~~~~~~~~~~~ 421 (532)
+.............+.+..+ .+. ..........++.+++.++.+++.||++||+. ...... +..+...+...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (399)
T TIGR00893 225 FLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMF 304 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Confidence 55544444444444443322 222 22334455567778899999999999999862 111111 11111111111
Q ss_pred hhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh-hhhHHHH
Q 009563 422 VKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLG-GWLPFAV 495 (532)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~-~~~~~~~ 495 (532)
................+..++ ....+...++..|.+|++.|+++.|+.+....+|..++|.+. ..+ +...+.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~ 383 (399)
T TIGR00893 305 ATNYVNIPYAALALVALGFFG-LGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMV 383 (399)
T ss_pred HhccchhHHHHHHHHHHHHhc-hhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHH
Confidence 111111111222222233333 336788999999999999999999999999999999999887 234 5666777
Q ss_pred HHHHHHHHHHHHh
Q 009563 496 FAACGIIGGLFAF 508 (532)
Q Consensus 496 ~~~~~~~~~~~~~ 508 (532)
.+++.+++.+..+
T Consensus 384 ~~~~~~~~~~~~~ 396 (399)
T TIGR00893 384 VAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHH
Confidence 7776666655543
No 32
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.8e-30 Score=255.71 Aligned_cols=339 Identities=18% Similarity=0.158 Sum_probs=239.3
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc--------chHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS--------PNYSTYV 185 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~--------~~~~~l~ 185 (532)
.+.+++|+ |..+.|++.+++.+++.+++++.|+++|| +|||+++..+.++.+++.++++++ .+++.++
T Consensus 41 ~i~~~~g~---s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (399)
T PRK05122 41 YVHDQLGF---SAFLAGLVISLQYLATLLSRPHAGRYADT-LGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLL 116 (399)
T ss_pred HHHHhcCc---cHHHHHHHHHHHHHHHHHhchhhHhHHhc-cCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Confidence 46789999 99999999999999999999999999999 999999999999988877766543 2577899
Q ss_pred HHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHh
Q 009563 186 VLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIIL 262 (532)
Q Consensus 186 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~ 262 (532)
+.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+. +||+.+++..+..++.. +..
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~-~~~ 195 (399)
T PRK05122 117 LGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGL-LLA 195 (399)
T ss_pred HHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH-HHH
Confidence 99999999999999999999999999999999999999999999999999988875 99999887766654433 222
Q ss_pred cccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHH
Q 009563 263 PFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLT 342 (532)
Q Consensus 263 ~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (532)
...|+.+. .+++ +.++++.+++.
T Consensus 196 ~~~~~~~~---~~~~----------------------------------------------------~~~~~~~~~~~-- 218 (399)
T PRK05122 196 RPRPAVPP---VKGE----------------------------------------------------RLPFRRVLGRV-- 218 (399)
T ss_pred hcCCCCCC---CCcc----------------------------------------------------chhHHHHHHHH--
Confidence 22222210 0000 00011111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCc-chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHh
Q 009563 343 RIRLFLAVTINFLCSVVYYGISLNVVNLQ-TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSL 421 (532)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~ 421 (532)
+..........+.........+.+..+.+ ...........++.+++.++.+++.||+++|+.+..+..+..++.+++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
T PRK05122 219 WPYGMGLALASIGFGTIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWL 298 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111111111111111111111 12223334455677788999999999999999888887777777666655
Q ss_pred hhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHH
Q 009563 422 VKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVF 496 (532)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~ 496 (532)
..+ .+ ..++..++.+++.+..++.......|..|++.|+++.|+.+....+|..++|.+. ..++...+++.
T Consensus 299 ~~~--~~--~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 374 (399)
T PRK05122 299 APS--PW--MALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAA 374 (399)
T ss_pred hcc--HH--HHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 432 21 3445667778888888887777888999999999999999999988888777665 34677788888
Q ss_pred HHHHHHHHHHHhhccCCCCCCh
Q 009563 497 AACGIIGGLFAFYLPETLNKPL 518 (532)
Q Consensus 497 ~~~~~~~~~~~~~l~~~~~~~~ 518 (532)
+++.+++.++..+++++++|+.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T PRK05122 375 ALAALLGLALTWLLYRRAPRAV 396 (399)
T ss_pred HHHHHHHHHHHHHhcccccccC
Confidence 8888877777777766555544
No 33
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1e-30 Score=262.48 Aligned_cols=413 Identities=14% Similarity=0.104 Sum_probs=269.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhH
Q 009563 49 FGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYK 128 (532)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~ 128 (532)
..+.+|.+..++++.+.+++.|+.+.++.. | |..+..+.++ ..|.. .+.+.......|+++ +..+
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~--~---~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~---s~~~ 77 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTM--V---AMVNKENSTD-LACLS------AENELDNIKNPNFKW---SGAL 77 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEE--E---EcccCCCCCC-ccccc------cccccccccCCCCCC---CHHH
Confidence 567788999999999999999998888771 1 1110000000 00000 001111233447899 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc--chHHHHHHHHHHHHhhccccchhhhhee
Q 009563 129 VGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS--PNYSTYVVLRMLTGFSTGGVGLCAFVLA 206 (532)
Q Consensus 129 ~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i 206 (532)
.|++.+.+.+++.+++++.|+++|| +|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++
T Consensus 78 ~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~ 156 (465)
T TIGR00894 78 QGLILSSHFYGQIIIQIPVGYLAGK-YVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKII 156 (465)
T ss_pred hhHHHHHHHHHHHHHHcchHHHHHH-hCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHH
Confidence 9999999999999999999999999 999999999999999999887554 5688899999999999999999999999
Q ss_pred ecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHH
Q 009563 207 TEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAM 282 (532)
Q Consensus 207 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 282 (532)
.|++|+++|+++.++...+..+|.++++.+++.+. +||+.|++.+++.++..++.+++.+|+|+..... +.++.
T Consensus 157 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~- 234 (465)
T TIGR00894 157 VKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCI-SKFEK- 234 (465)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCC-CHHHH-
Confidence 99999999999999999999999999999988774 8999999999988887756666677776421111 11110
Q ss_pred HHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHH
Q 009563 283 KIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYG 362 (532)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (532)
+ .+.+. . +.+ +...+.+..++++++++..+...+..+............
T Consensus 235 ~---~i~~~-~--------------------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (465)
T TIGR00894 235 K---YINSS-L--------------------QGQ-------KGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTY 283 (465)
T ss_pred H---HHHhh-c--------------------ccc-------cCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000 0 000 000011235778888887766655555444444333333
Q ss_pred hhhcc-ccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhH--------HHHHHHHHHHHHHHHhhh-ccchhH
Q 009563 363 ISLNV-VNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMT--------IGTLWFSGFFCLLGSLVK-NNGIWK 429 (532)
Q Consensus 363 ~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~ 429 (532)
.+.++ +..+.+ .........++.+++.+++|++.||+++|+.. ..+..........+.... .....
T Consensus 284 lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 362 (465)
T TIGR00894 284 LPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFY- 362 (465)
T ss_pred HHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchH-
Confidence 33333 222332 23333445677788999999999997644211 111111111111111111 11211
Q ss_pred HHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHHH--------hhhhhHHHHHHHHHH
Q 009563 430 IVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVV--------LGGWLPFAVFAACGI 501 (532)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~~--------~~~~~~~~~~~~~~~ 501 (532)
..++...+.+++.+...+.......|..|+ .+|.+.|+.+..+.+|++++|.+.. .++...|.+.++..+
T Consensus 363 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~ 440 (465)
T TIGR00894 363 -LTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNI 440 (465)
T ss_pred -HHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHH
Confidence 233334444444444455555666677765 7899999999999999999998871 124566777777777
Q ss_pred HHHHHHhhccCC
Q 009563 502 IGGLFAFYLPET 513 (532)
Q Consensus 502 ~~~~~~~~l~~~ 513 (532)
++.++...+.+.
T Consensus 441 i~~i~~~~~~~~ 452 (465)
T TIGR00894 441 LCVIFYLIFGSA 452 (465)
T ss_pred HHHHHeeeeecc
Confidence 776666555433
No 34
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=2.2e-30 Score=262.31 Aligned_cols=387 Identities=13% Similarity=0.106 Sum_probs=273.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHHHHHH
Q 009563 55 RHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVGLVQA 134 (532)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~~~~s 134 (532)
+++..++++.+...+|....... . |.+.+++|. +..+.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~--------~--------------------------p~~~~~~g~---s~~~~~~~~~ 44 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVA--------I--------------------------PTIAGDLGS---SLSQVQWVIT 44 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHhcCC---ChhhhhHHHH
Confidence 35566777888888887777766 4 899999999 9999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecccCCCc
Q 009563 135 LFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSK 214 (532)
Q Consensus 135 ~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 214 (532)
.+.++..++.++.|+++|| +|||+++.++.++..+++++++++++++.++++|+++|++.+...+...+++.|++|+++
T Consensus 45 ~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~ 123 (485)
T TIGR00711 45 SYMLANAISIPLTGWLAKR-FGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK 123 (485)
T ss_pred HHHHHHHHHHHhHHHHHHH-hCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHH-----
Q 009563 215 RGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMR----- 286 (532)
Q Consensus 215 r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~----- 286 (532)
|+++.++...+..+|..+++.+++.+. +||+.|++.+++.++..++..+++||+++. .+++.+.....+.
T Consensus 124 r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~ 201 (485)
T TIGR00711 124 RGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLG 201 (485)
T ss_pred HHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHH
Confidence 999999999999999999999998886 999999999888877776666677775431 1111121111000
Q ss_pred --HHHHHhCCCCCccccccchhhhhhhhhcC-ccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHh
Q 009563 287 --AIAKSNGRHLPDGVVLMLDDEQENDASNG-KQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGI 363 (532)
Q Consensus 287 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (532)
.....++.+. +.... ........... .-......+...+.+....++++++.++...+..+...+......+..
T Consensus 202 ~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T TIGR00711 202 SLLYGLSEGPER-GWFDS--NEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLL 278 (485)
T ss_pred HHHHHHhhCCCC-CCCCc--hHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 0000001000 00000 00000000000 000000000000111112357778777666555555555444444444
Q ss_pred hhcccc-Ccc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhh-hccchhHHHHHHHHHH
Q 009563 364 SLNVVN-LQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLV-KNNGIWKIVRMICGVM 438 (532)
Q Consensus 364 ~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 438 (532)
+.+..+ .+. ..........++.+++.++.+++.||++||+.+..+..+.+++...+.+. ......+ ......++
T Consensus 279 p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l 357 (485)
T TIGR00711 279 PLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFL-AIALPQFI 357 (485)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHH-HHHHHHHH
Confidence 544433 222 23444455667788899999999999999999988888888777776632 2222222 34455677
Q ss_pred HHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 439 GIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
.+++.+..++.......+..|++.++++.|+.+....+|+.+++.+.
T Consensus 358 ~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~ 404 (485)
T TIGR00711 358 RGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALI 404 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 78888877777777778889999999999999999999999998877
No 35
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.5e-29 Score=247.35 Aligned_cols=328 Identities=13% Similarity=0.115 Sum_probs=235.3
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|++.+++|+ +..+.++..+++.++..+++++.|+++|| +|||+++..+.++.+++.++++++++++.+++.|+++|
T Consensus 44 ~~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 119 (394)
T PRK10213 44 TPMAQDLGI---SEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLG 119 (394)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 889999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
++.+...+...+++.|++|+++|+++.++...+.++|..++|.+++.+. +||+.|++.+++.++..+.....+||+|
T Consensus 120 ~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 120 LALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 9999999999999999999999999999999999999999999999886 9999999988777665544444456643
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
+. ++ +.....++.+++|.++......
T Consensus 200 ~~----~~--------------------------------------------------~~~~~~~~~l~~~~~~~~~~~~ 225 (394)
T PRK10213 200 GE----PS--------------------------------------------------HQKQNTFRLLQRPGVMAGMIAI 225 (394)
T ss_pred cc----cc--------------------------------------------------cchhHHHHHhcCHHHHHHHHHH
Confidence 10 00 0001234567777666544433
Q ss_pred HHHHHHH-HHHHHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhcc
Q 009563 350 VTINFLC-SVVYYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNN 425 (532)
Q Consensus 350 ~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 425 (532)
+...... ....+..+.+....+.+ ........+++.+++.++.+++.||.++ +.+..+..+..+..+++....+.
T Consensus 226 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~~~l~~~~~~ 304 (394)
T PRK10213 226 FMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAVSALVLTLWGSD 304 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHHhhh
Confidence 3322222 12223334444443332 2344455567788899999999999544 44333333333332222222222
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHH
Q 009563 426 GIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACG 500 (532)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~ 500 (532)
.+ ...+..++.+++.+...+...+++.+..|+ .++...++.....++|..+||.+. ..|....+...+++.
T Consensus 305 -~~--~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~ 380 (394)
T PRK10213 305 -KI--VATGVAIIWGLTFALVPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLM 380 (394)
T ss_pred -HH--HHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHH
Confidence 21 344566777888888888888888888874 456777777777778888888777 234445555554444
Q ss_pred HHH
Q 009563 501 IIG 503 (532)
Q Consensus 501 ~~~ 503 (532)
++.
T Consensus 381 ~~~ 383 (394)
T PRK10213 381 LLT 383 (394)
T ss_pred HHH
Confidence 333
No 36
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.3e-29 Score=244.74 Aligned_cols=366 Identities=13% Similarity=0.067 Sum_probs=258.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceee-cccccchhhhHH
Q 009563 51 PWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVT-QWGLFCEEKYKV 129 (532)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~s~~~~ 129 (532)
+-.++.+.+.+++.+......+..+.+ . +.+.+ |+|+ |..|.
T Consensus 30 ~~a~r~l~~s~~~f~~~F~~w~~~~~l--------~--------------------------~~~~~~~~~l---s~~q~ 72 (462)
T PRK15034 30 HIARRNLWISVSCLLLAFCVWMLFSAV--------T--------------------------VNLNKIGFNF---TTDQL 72 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHhhhhhcCC---CHHHH
Confidence 346677777777777777777776665 3 66655 8999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc-----chHHHHHHHHHHHHhhccccchhhhh
Q 009563 130 GLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS-----PNYSTYVVLRMLTGFSTGGVGLCAFV 204 (532)
Q Consensus 130 ~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~ 204 (532)
+++.+++.+++.++.++.|++.|| +|.|+++.++.++.++.+++.+++ ++++.+++.|++.|++ +..++....
T Consensus 73 g~l~ai~~l~~al~rip~G~l~Dr-~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~ 150 (462)
T PRK15034 73 FLLTALPSVSGALLRVPYSFMVPI-FGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMG 150 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHH
Confidence 999999999999999999999999 999999999999999999999987 8999999999999998 778899999
Q ss_pred eeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---------------------chHHHHHHHHHHHHHHHHHHhc
Q 009563 205 LATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---------------------TWRALYIASSIPSILFLLIILP 263 (532)
Q Consensus 205 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---------------------~wr~~f~~~~~~~~~~~~~~~~ 263 (532)
.+++|+|+++||+++++.....++|..+++.+...+. +||...++.+++.++..++.++
T Consensus 151 ~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 151 NISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred HHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997777777765544443211 3788888888877777756666
Q ss_pred ccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHH
Q 009563 264 FLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTR 343 (532)
Q Consensus 264 ~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (532)
++++.|. .+ ....+.++.+|+|..|
T Consensus 231 ~~~~~~~---~~----------------------------------------------------~~~~~~~~vlk~~~~W 255 (462)
T PRK15034 231 GMNDIAS---SR----------------------------------------------------ASIADQLPVLQRLHLW 255 (462)
T ss_pred hCCCccc---cc----------------------------------------------------cCHHHHHHHhCCCchh
Confidence 6555331 00 0011345678888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccc-Ccc-hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHh
Q 009563 344 IRLFLAVTINFLCSVVYYGISLNVVN-LQT-NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSL 421 (532)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~ 421 (532)
...++.+..+.......+.++++... ... .......+..+...+..+++|+++||+|+++++.++.+++.++...+..
T Consensus 256 llslly~~tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l 335 (462)
T PRK15034 256 LLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFL 335 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 66665555444433333333333322 211 1122233344667778899999999999999999888877776644333
Q ss_pred hhc-cc-hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccc---------------------hhhhhHHHHHHHHHHHHH
Q 009563 422 VKN-NG-IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPT---------------------VVRNAALGCATQAAQLGA 478 (532)
Q Consensus 422 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------------------~~r~~~~g~~~~~~~~g~ 478 (532)
... .. .......+..+...+..+..+...+-++.+.+|+ ++.|.+.|+....+.+|+
T Consensus 336 ~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Gg 415 (462)
T PRK15034 336 TLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGG 415 (462)
T ss_pred HhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHccc
Confidence 222 11 1111333333333445555556666666676663 146789999999999999
Q ss_pred HHHHHHH-----Hhh-hhhHHHHHHHHHHHHHHHHhhc
Q 009563 479 ILAPFVV-----VLG-GWLPFAVFAACGIIGGLFAFYL 510 (532)
Q Consensus 479 ~i~p~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~l 510 (532)
++.|.+. ..| +...|+.+.+..+++.++.++.
T Consensus 416 f~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 416 FFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred chhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999776 222 5567788887777777776544
No 37
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=2.7e-29 Score=252.84 Aligned_cols=385 Identities=11% Similarity=0.080 Sum_probs=263.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHHHHHHHH
Q 009563 57 FVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVGLVQALF 136 (532)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~~~~s~~ 136 (532)
+.+++++.++..++....... . |.+.+++|. +..+.+++.+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~--------~--------------------------p~~~~~~g~---s~~~~~~~~~~~ 54 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTA--------L--------------------------PSMAQSLGE---SPLHMHMVIVSY 54 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHH--------H--------------------------HHHHHHhCc---CHHHHHHHHHHH
Confidence 445566777777776655554 3 889999999 999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecccCCCchh
Q 009563 137 FFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRG 216 (532)
Q Consensus 137 ~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 216 (532)
.++..++.+++|+++|| +|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+....++.|++|+++|+
T Consensus 55 ~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 133 (471)
T PRK10504 55 VLTVAVMLPASGWLADR-VGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYM 133 (471)
T ss_pred HHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHH------H
Q 009563 217 AAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMR------A 287 (532)
Q Consensus 217 ~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~------~ 287 (532)
++.++.....++|..+++.+++.+. +||+.|++.....++..+......|+.+. .+.+.+....... .
T Consensus 134 ~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~ 210 (471)
T PRK10504 134 AAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATL 210 (471)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHH
Confidence 9999999999999999999998876 99999999887777666555555665432 1112221111100 0
Q ss_pred HHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009563 288 IAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNV 367 (532)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (532)
....++.+.............-...... .....+++....+..+ .++++|+.++..+...++.........+..+++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 288 (471)
T PRK10504 211 TLALDGSKGLGLSPLAIAGLVAVGVVAL-LLYLLHARNNNRALFS-LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFL 288 (471)
T ss_pred HHHHhcCCcCCcchHHHHHHHHHHHHHH-HHHHHHHhcCCCCccC-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000000000000000000 0000000000011112 3478888777665555555555544444555554
Q ss_pred cc-Ccch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 009563 368 VN-LQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGV 443 (532)
Q Consensus 368 ~~-~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (532)
+. .+.+ .........++.+++.++.+++.||+|||+++..+..+..+..+++.+.......+ ...+..++.+++.
T Consensus 289 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~ 367 (471)
T PRK10504 289 QIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYY-LLPFVLFLQGMVN 367 (471)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHH-HHHHHHHHHHHHH
Confidence 42 2322 23334444556667778899999999999999888887777766665543222221 2334455566777
Q ss_pred HhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 444 AGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 444 ~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+..++....+..+..|++.++.+.|+.++...+|..++|.+.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~ 409 (471)
T PRK10504 368 STRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIA 409 (471)
T ss_pred HHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 777888888888999999999999999999999988888776
No 38
>PRK15075 citrate-proton symporter; Provisional
Probab=99.98 E-value=2.7e-29 Score=249.32 Aligned_cols=344 Identities=18% Similarity=0.187 Sum_probs=222.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHHHH
Q 009563 53 QLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVGLV 132 (532)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~~~ 132 (532)
+++....++++.+++++|....++. . |.+.+|++. ++.+.+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~--------~--------------------------~~i~~~~~~---~~~~~~~~ 55 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFY--------A--------------------------TAIAKTFFP---AGNEFASL 55 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHHhCC---CCCchHHH
Confidence 4557888899999999999999988 6 999999998 76665443
Q ss_pred -HHHH-----HHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHH--------HHHHHHHHHHhhcccc
Q 009563 133 -QALF-----FFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYS--------TYVVLRMLTGFSTGGV 198 (532)
Q Consensus 133 -~s~~-----~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~ 198 (532)
.+.. .++..+++++.|+++|| +|||+.++.+.+++++++++++++++++ .++++|+++|++.+..
T Consensus 56 ~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~ 134 (434)
T PRK15075 56 MLTFAVFGAGFLMRPLGAIVLGAYIDR-VGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVE 134 (434)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHhhh-hchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 3332 23335789999999999 9999999999999999999999999987 4689999999999999
Q ss_pred chhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh---------h--chHHHHHHHHHHHHHHHHHHhccccc
Q 009563 199 GLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF---------Q--TWRALYIASSIPSILFLLIILPFLPE 267 (532)
Q Consensus 199 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l---------~--~wr~~f~~~~~~~~~~~~~~~~~~~e 267 (532)
.+....++.|++|+++|++++++...+..+|..+++.+++.+ . |||++|++..+...+.. ......||
T Consensus 135 ~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~~~e 213 (434)
T PRK15075 135 LGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIF-LIRRSLEE 213 (434)
T ss_pred HHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHHhcCC
Confidence 999999999999999999999999988888888777776654 1 99999987554332211 22222233
Q ss_pred CchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHH
Q 009563 268 SPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLF 347 (532)
Q Consensus 268 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (532)
++++.. +. .+ .+.+..++...+++..+....
T Consensus 214 ~~~~~~----------------~~-~~--------------------------------~~~~~~~~~~~~~~~~~~~~~ 244 (434)
T PRK15075 214 TEEFLA----------------RK-HR--------------------------------PSMREIFRSLAANWRIVLAGM 244 (434)
T ss_pred CHHHHH----------------hh-hc--------------------------------cccccHHHHHHHhHHHHHHHH
Confidence 211000 00 00 000001122223322221111
Q ss_pred H-HHHHHHHHHHHHHHhhhcccc-Ccch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHH-HHHh
Q 009563 348 L-AVTINFLCSVVYYGISLNVVN-LQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCL-LGSL 421 (532)
Q Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~-~~~~ 421 (532)
. .+..........+..+.+.++ .+.+ .........++.+++.++.|++.||++||+.+..+..+..+... .+..
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 324 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSW 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 1 111111122222223333322 2322 23334455677788999999999999999988776554433222 1111
Q ss_pred hhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHH-HHHHHHHHHH
Q 009563 422 VKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQ-LGAILAPFVV 485 (532)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~-~g~~i~p~~~ 485 (532)
........ ......++.+++.+...+..+.+..|.+|++.|+++.++.+.... +++.++|.+.
T Consensus 325 ~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~ 388 (434)
T PRK15075 325 LVAAPSFA-RMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAIS 388 (434)
T ss_pred HHcCCchH-HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHH
Confidence 11211111 222333444555566666677888999999999999999766554 3467777776
No 39
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.98 E-value=4.6e-29 Score=246.11 Aligned_cols=348 Identities=13% Similarity=0.027 Sum_probs=250.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHH
Q 009563 50 GPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKV 129 (532)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~ 129 (532)
++..+...+.+.+..+...+........ . |.+.+++|+ |..+.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~--------------------------~~~~~~~~~---s~~~~ 50 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPG--------M--------------------------LAVVEDFNA---GAEWV 50 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcc--------h--------------------------HHHHHHhCC---CHHHH
Confidence 3445666666666666666654444333 3 788999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecc
Q 009563 130 GLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEP 209 (532)
Q Consensus 130 ~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 209 (532)
++..+.+.+++.+++++.|+++|| +|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+....++.|+
T Consensus 51 ~~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~ 129 (406)
T PRK15402 51 PTSMTAYLAGGMFLQWLLGPLSDR-IGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQES 129 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999998888889999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHH
Q 009563 210 VGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMR 286 (532)
Q Consensus 210 ~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~ 286 (532)
+|+++|.+..++......+|..++|.+++.+. +||+.|++.++..++..+..++..||+++....+.+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 201 (406)
T PRK15402 130 FEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSL-------- 201 (406)
T ss_pred hChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccH--------
Confidence 99999999999988888899999999988775 9999999988888777655556677764210000000
Q ss_pred HHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009563 287 AIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLN 366 (532)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (532)
++...+++.+++++.++.......+............+.+
T Consensus 202 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 241 (406)
T PRK15402 202 ----------------------------------------KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVI 241 (406)
T ss_pred ----------------------------------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 0001134567778766554443333322221111112222
Q ss_pred -cccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhh--ccchhHHHHHHHHHHHH
Q 009563 367 -VVNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVK--NNGIWKIVRMICGVMGI 440 (532)
Q Consensus 367 -~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 440 (532)
....+.+. ........++.+++.++.+++.||+++|+.+..+..+..++.+++.... .....+ +..+..++.+
T Consensus 242 ~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~g 320 (406)
T PRK15402 242 LISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYL-WLTAGLSLYA 320 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHH-HHHHHHHHHH
Confidence 12222222 2223334456778899999999999999998888777776666665543 111111 3455666777
Q ss_pred HHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 441 FGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
++.+...+......... ++++++++.++.+....++..+|+.+.
T Consensus 321 ~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~ 364 (406)
T PRK15402 321 FGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELS 364 (406)
T ss_pred HHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666655555444 347899999999999999998988887
No 40
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=1.4e-29 Score=256.92 Aligned_cols=386 Identities=17% Similarity=0.202 Sum_probs=252.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhH
Q 009563 49 FGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYK 128 (532)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~ 128 (532)
.++.+|+.+..++++++.+.++....... . |.+.+++|+ +..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------------------------~~i~~~~~~---s~~~ 56 (496)
T PRK03893 14 LNRAQWKAFSAAWLGYLLDGFDFVLITLV--------L--------------------------TEVQGEFGL---TTVQ 56 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHHhCC---CHHH
Confidence 45678888889999999999998877776 4 899999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeec
Q 009563 129 VGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATE 208 (532)
Q Consensus 129 ~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 208 (532)
.+++.+.+.+++.+++++.|+++|| +|||+++..+.++.+++.++.+++++++.+++.|++.|++.+...+....++.|
T Consensus 57 ~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~ 135 (496)
T PRK03893 57 AASLISAAFISRWFGGLLLGAMGDR-YGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIE 135 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHH
Q 009563 209 PVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIM 285 (532)
Q Consensus 209 ~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~ 285 (532)
++|+++|+++.++...+..+|..+++.+.+.+. +||+.|++..+..++ .++....+||++++...+++.++.++..
T Consensus 136 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 214 (496)
T PRK03893 136 SWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPEAEDWKEKHAGKAPVRTMV 214 (496)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCCchhhhhhccccccchhHH
Confidence 999999999999999999999999999988876 999999875544433 3244455676654321111000000000
Q ss_pred HHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhh----------hhhhccccchh----------------hhhcC
Q 009563 286 RAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEEL----------ATKEAVTGSVI----------------DVIKS 339 (532)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----------------~~~~~ 339 (532)
+... ....+...... .........+. ...+.
T Consensus 215 ~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (496)
T PRK03893 215 DILY-----------------------RGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSG 271 (496)
T ss_pred HHHh-----------------------cchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcc
Confidence 0000 00000000000 00000000000 00000
Q ss_pred hHHHHHHHHHHHHHHHHH----HHHHHhhhcc-ccCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHH
Q 009563 340 PLTRIRLFLAVTINFLCS----VVYYGISLNV-VNLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWF 411 (532)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~ 411 (532)
+ .+..........+... ......+.+. ...+. ..........++.+++.++.+++.||++||+.+..+..+
T Consensus 272 ~-~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~ 350 (496)
T PRK03893 272 K-RWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLI 350 (496)
T ss_pred c-chhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 0 0000000000000000 0112233333 23332 233444556677888999999999999999988877766
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----H
Q 009563 412 SGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----V 486 (532)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~ 486 (532)
..+..+.+........ + ......++.++...+..+....++.|.+|++.|++++|+.+....+|+.++|.+. .
T Consensus 351 ~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 351 SQLLIIPVFAIGGANV-W-VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred HHHHHHHHhhccccHH-H-HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 6655544433322221 1 2222222222222334456667888999999999999999999999999999887 2
Q ss_pred hhhhhHHHHHHHH
Q 009563 487 LGGWLPFAVFAAC 499 (532)
Q Consensus 487 ~~~~~~~~~~~~~ 499 (532)
.++...+...++.
T Consensus 429 ~g~~~~~~~~~~~ 441 (496)
T PRK03893 429 LDLGTALASLSFS 441 (496)
T ss_pred CChHHHHHHHHHH
Confidence 3444455444433
No 41
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=4.1e-29 Score=245.07 Aligned_cols=365 Identities=13% Similarity=0.050 Sum_probs=258.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHHH
Q 009563 52 WQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVGL 131 (532)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~~ 131 (532)
.+|++...+++++++.+.+....+.. . |++.+++|+ |..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~--------~--------------------------~~i~~~~~~---s~~~~g~ 46 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMV--------M--------------------------GPIAEYFNL---PVSSMSN 46 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhh--------h--------------------------HHHHHHhCC---CHHHHHH
Confidence 35567777788888888887777776 4 899999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecccC
Q 009563 132 VQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVG 211 (532)
Q Consensus 132 ~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 211 (532)
+.+.+.+++.++++++|++.|| +|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+....++.|++|
T Consensus 47 ~~s~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~ 125 (394)
T PRK03699 47 TFTFLNAGILISIFLNAWLMEI-IPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYE 125 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcc
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999889999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHH
Q 009563 212 PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRA 287 (532)
Q Consensus 212 ~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~ 287 (532)
+++|++..+.......+|..++|.+.+.+. +||+.|++.+++.++..++.+ + .+.|+. .+++
T Consensus 126 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~-~-~~~p~~--~~~~---------- 191 (394)
T PRK03699 126 GKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL-F-SEFPAL--GKHA---------- 191 (394)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH-h-cCCccc--cccC----------
Confidence 999999999998889999989888876653 899999988887766553322 2 222210 0000
Q ss_pred HHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009563 288 IAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNV 367 (532)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (532)
+ + +.++ ..+.. .++..+...+..++............+.+.
T Consensus 192 ---------~-----------~----~~~~--------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 232 (394)
T PRK03699 192 ---------P-----------K----ADKP--------------VAKEK-WGIGVLFLAIAALLYILAQLTFISWVPEYA 232 (394)
T ss_pred ---------c-----------c----ccCc--------------ccccc-CChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0000 00000 122222222222222222222222233333
Q ss_pred -ccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 009563 368 -VNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGV 443 (532)
Q Consensus 368 -~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (532)
+..+.+. ........++..++.++.+++.||+++|+.+.....+..+...++....+.. ...+..++.+++.
T Consensus 233 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~G~~~ 308 (394)
T PRK03699 233 QKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPS----HLLYAILGLGFFS 308 (394)
T ss_pred HHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHH
Confidence 3333322 2333444567788999999999999999988877766666555544333221 2334556667777
Q ss_pred HhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHhhccC
Q 009563 444 AGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAFYLPE 512 (532)
Q Consensus 444 ~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~ 512 (532)
+..++...++..+..|. .++...+.......+|..++|.+. ..+....+++.+++.+++.+..+.+++
T Consensus 309 ~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 309 SAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 77778777777777664 457778888888889999999887 456777777777777777666555543
No 42
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=7.4e-30 Score=247.37 Aligned_cols=323 Identities=23% Similarity=0.266 Sum_probs=239.6
Q ss_pred C-ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 009563 113 S-STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLT 191 (532)
Q Consensus 113 ~-~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 191 (532)
| .+.+++|. +..+.+++.+++.++..+++++.|+++|| +|||+++.++.++.+++.++..++++++.+++.|++.
T Consensus 20 ~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (352)
T PF07690_consen 20 PLYLAEELGL---SPSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLL 95 (352)
T ss_dssp H-HHHCCSTT---TSHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccc
Confidence 6 78899999 99999999999999999999999999999 9999999999999999977777778888999999999
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccC
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPES 268 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~es 268 (532)
|++.+...+....++.|++|+++|++++++...+..+|.++++.+++.+. +||+.|++.+++.++..++..++++++
T Consensus 96 g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 96 GIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEP 175 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---
T ss_pred ccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhc
Confidence 99999999999999999999999999999999999999999999999887 899999999999988875545566654
Q ss_pred chhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhcccc-chhhhhcChHHHHHHH
Q 009563 269 PRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTG-SVIDVIKSPLTRIRLF 347 (532)
Q Consensus 269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 347 (532)
|+....+.+.++ + ++.++... .++.+++++..+....
T Consensus 176 ~~~~~~~~~~~~------------------------------------~------~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (352)
T PF07690_consen 176 PPPRERESPKES------------------------------------E------SKKPKPLKPGFKSLFKNPVLWILLI 213 (352)
T ss_dssp STTTT--SSTTT------------------------------------T--------HHHCCCH-CTHHHHHHCCHHHHH
T ss_pred cccccccccccc------------------------------------c------cccccccccccccccccchhhhhhh
Confidence 421100000000 0 00001111 2455566654442223
Q ss_pred HHHHHHHHHHHHHHHhhhc-cccCcch-HH---HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhh
Q 009563 348 LAVTINFLCSVVYYGISLN-VVNLQTN-LY---LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLV 422 (532)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~ 422 (532)
..+...+.........+.+ ....+.+ .. .......+..+++.++.+++.||+++++..........+..+.+...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
T PF07690_consen 214 AFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLL 293 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCS
T ss_pred hhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333444443 3333333 22 22445556667778999999999999888777777666666666554
Q ss_pred hccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHH
Q 009563 423 KNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAP 482 (532)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p 482 (532)
....... ..++..++.+++.+...+....+..+.+|++.++++.|+.+....+|+.++|
T Consensus 294 ~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 294 PFSSSPV-WLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHCHHH-HHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4432222 4455667788888888999999999999999999999999999999999998
No 43
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=8.6e-29 Score=242.99 Aligned_cols=319 Identities=17% Similarity=0.149 Sum_probs=236.8
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.+++|+ +..+.+++.+++.++..+++++.|+++|| +|||+++..+.++.+++.++.+++++++.+++.|++.|
T Consensus 29 p~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 104 (385)
T TIGR00710 29 PEIAADLST---PASIVQMTLTLYLLGFAAGQLLWGPLSDR-YGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQA 104 (385)
T ss_pred HHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 889999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++.+. +||+.|++.++..++..++.+++.||++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 105 FGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred cchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999999999999999998776 9999999988888777756666677754
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
+... +.+.+ .....+++.++++.++...+..
T Consensus 185 ~~~~-~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 215 (385)
T TIGR00710 185 PYEA-RIQIS------------------------------------------------TYFETFLLLLKSKMFWGYALIY 215 (385)
T ss_pred CCcc-cCCHH------------------------------------------------HHHHHHHHHHcCchhHHHHHHH
Confidence 2100 00000 0011345566777665544433
Q ss_pred HHHHHHHHHHHHHhhhccc-cCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhcc
Q 009563 350 VTINFLCSVVYYGISLNVV-NLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNN 425 (532)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 425 (532)
..............+.+.. ..+. ..........++.+++.++.+++.||+++|+.+..+..+..++.+++......
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (385)
T TIGR00710 216 GASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAIL 295 (385)
T ss_pred HHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333222222222222221 2222 22333445567788899999999999999998888777776666555543221
Q ss_pred c-hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHH-HHHHHHHHH
Q 009563 426 G-IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQL-GAILAPFVV 485 (532)
Q Consensus 426 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-g~~i~p~~~ 485 (532)
. ......+....+.+++.+...+.......|..| +.++++.++.+..... |.+.+|.+.
T Consensus 296 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 296 GLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111134445566777788888888888888887 5689999999888765 444555544
No 44
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.97 E-value=7.7e-30 Score=253.91 Aligned_cols=388 Identities=12% Similarity=0.050 Sum_probs=257.3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhh
Q 009563 48 EFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKY 127 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~ 127 (532)
+.+.|+|.++..+++.......+....+.. . |++.+++|+ +..
T Consensus 12 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~--------~--------------------------~~i~~~~g~---s~~ 54 (455)
T TIGR00892 12 PDGGWGWVVLGATFVSIGFSYAFPKAVTVF--------F--------------------------KELQQIFQA---TYS 54 (455)
T ss_pred CCCCcchHHHHHHHHHHHHHHhhhcchhhh--------H--------------------------HHHHHHhCc---chh
Confidence 455678888888777766555554444444 3 889999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHH-HHHHHHhhccccchhhhhee
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVV-LRMLTGFSTGGVGLCAFVLA 206 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i 206 (532)
+.+++.+.+.++..++.++.|+++|| +|||++++.+.++.++++++++++++++.+++ .|++.|++.+...+....++
T Consensus 55 ~~~~~~s~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~ 133 (455)
T TIGR00892 55 ETAWISSIMLAVLYAGGPISSILVNR-FGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTML 133 (455)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHH-cCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence 99999999999999999999999999 99999999999999999999999999998865 57999999998777777888
Q ss_pred ecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHH
Q 009563 207 TEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMK 283 (532)
Q Consensus 207 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~ 283 (532)
.++++ ++|+++.++...+..+|..+++.+++.+. |||+.|++.+++.++..+..++..++.+... +.+.++
T Consensus 134 ~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~--- 207 (455)
T TIGR00892 134 GKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQR--VSKSKS--- 207 (455)
T ss_pred HHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccc--cccccc---
Confidence 89985 78999999999999999999999888776 9999999999887766544343333322100 000000
Q ss_pred HHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHh
Q 009563 284 IMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGI 363 (532)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (532)
.++. .++. ..++ ... ....++ ..+....++++++.++......++..+........+
T Consensus 208 -------~~~~-~~~~-------~~~~----~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 264 (455)
T TIGR00892 208 -------KEGL-PPDG-------STKK----LSK--KSTAEK--INRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFL 264 (455)
T ss_pred -------cccC-CCCC-------cccc----ccc--cchhhh--hhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHH
Confidence 0000 0000 0000 000 000000 001111246777766654444433333332222222
Q ss_pred hhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhh--CCchhHHHH--HHHHHHHHHHHHhhhccchhHHHHHHHH
Q 009563 364 SLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKL--GRKPMTIGT--LWFSGFFCLLGSLVKNNGIWKIVRMICG 436 (532)
Q Consensus 364 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~--gr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (532)
+.+..+.+.+ ........+++.+++.++.+++.||. ++++..... .++.+++.++..... +.+ ..++..
T Consensus 265 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--~~~--~~~i~~ 340 (455)
T TIGR00892 265 VPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG--DYT--GLVIYC 340 (455)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc--hHH--HHHHHH
Confidence 3333333322 23344455667778888899999973 333333332 222223333322222 222 345566
Q ss_pred HHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----Hh-hhhhHHHHHHHHHHHHHHH
Q 009563 437 VMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VL-GGWLPFAVFAACGIIGGLF 506 (532)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~-~~~~~~~~~~~~~~~~~~~ 506 (532)
++.+++.+...+...+++.|.+|++.++++.|+.+....+|++++|.+. .. ++...|++.+++.+++.+.
T Consensus 341 ~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 341 IFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 7777888888888889999999999999999999999999999999887 23 3566777777666665543
No 45
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=3.2e-29 Score=248.04 Aligned_cols=358 Identities=14% Similarity=0.027 Sum_probs=255.4
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh-----cchHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF-----SPNYSTYVVL 187 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~ 187 (532)
|.+.++++. +..+.|++.+.+.++..+++++.|+++|| +|||+++..+.++.+++.++.+. .++++.+++.
T Consensus 41 ~~~~~~~~~---s~~~~g~~~~~~~l~~~~~~~~~G~l~dr-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 116 (417)
T PRK10489 41 PVQIQMMTG---STLQVGLSVTLTGGAMFIGLMVGGVLADR-YDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLL 116 (417)
T ss_pred HHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhhHHHhhh-cCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 666778888 89999999999999999999999999999 99999999988887777665442 5688999999
Q ss_pred HHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcc
Q 009563 188 RMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 188 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
|++.|++.+...+...+++.|+.|+++|+++.++......+|..+|+.+++.+. +|++.|++.++..++.. +..+.
T Consensus 117 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~ 195 (417)
T PRK10489 117 GLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITL-LPLLR 195 (417)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HHHHh
Confidence 999999998888888999999999999999999999999999999999998875 89999998887766655 45566
Q ss_pred cccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHH
Q 009563 265 LPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRI 344 (532)
Q Consensus 265 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (532)
+|++++.. +++.+. .+.....++..++++.++.
T Consensus 196 l~~~~~~~--~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~ 228 (417)
T PRK10489 196 LPALPPPP--QPREHP---------------------------------------------LRSLLAGFRFLLASPVVGG 228 (417)
T ss_pred CCCCCCCC--cccccc---------------------------------------------hHHHHHHHHHHHcChHHHH
Confidence 67654210 000000 0000113345667776554
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccc-Ccch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHH
Q 009563 345 RLFLAVTINFLCSVVYYGISLNVVN-LQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGS 420 (532)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~ 420 (532)
.++..+......... ...+.+..+ .+.+ ........+++.+++.++.+++.||.++++.+..+..+..++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~-~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 307 (417)
T PRK10489 229 IALLGGLLTMASAVR-VLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFG 307 (417)
T ss_pred HHHHHHHHHHHHhHH-HhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHH
Confidence 443333322222222 223333333 3322 23334455677888999999999997777777777777666665554
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHH
Q 009563 421 LVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAV 495 (532)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~ 495 (532)
..++ .+ ...+..++.+++.+...+...+++.|..|++.|+++.|+.+....+|..++|.+. ..+....+..
T Consensus 308 ~~~~--~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~ 383 (417)
T PRK10489 308 LMPM--WI--LAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASA 383 (417)
T ss_pred ccch--HH--HHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHH
Confidence 4322 11 3455566667777666677788999999999999999999999999998988887 3455566666
Q ss_pred HHHHHHH-HHHHHhhccCCCCCChhhhHHhhhh
Q 009563 496 FAACGII-GGLFAFYLPETLNKPLYDTMAGMKE 527 (532)
Q Consensus 496 ~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~ 527 (532)
.+++.++ +.+....++++++++.+|.++|..+
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (417)
T PRK10489 384 SGFGLLIIGVLLLLVLGELRRFRQTPPEVDASD 416 (417)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccCCCCC
Confidence 6655554 4444567788888877776655443
No 46
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=7.1e-29 Score=242.34 Aligned_cols=335 Identities=13% Similarity=0.105 Sum_probs=234.0
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+++|+|+ +..+.|++.+.+.+++.++++++|+++|| +|||+++..+.++.+++.+++++++|++.+++.|++.|
T Consensus 27 ~~~~~~~g~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G 102 (382)
T PRK10091 27 TELAHDVGI---SIPAAGHMISYYALGVVVGAPIIALFSSR-YSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG 102 (382)
T ss_pred HHHHHHcCC---CHHHHhHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 889999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
++.+...+....++.|++++++|++++++...+..+|..+++.+++.+. +||+.|++.+++.++..+..++++||.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 103 FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred hhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999988888889999999999999999999999999999999988776 9999999999887776655666677753
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
+. .+. +. + ...+.++++..+......
T Consensus 183 ~~----~~~-~~--------------------------------------~-----------~~~~~~~~~~~~~~~~~~ 208 (382)
T PRK10091 183 DE----AKG-GL--------------------------------------R-----------EQFHFLRSPAPWLIFAAT 208 (382)
T ss_pred cc----ccc-CH--------------------------------------H-----------HHHHHhcChHHHHHHHHH
Confidence 20 000 00 0 001234444443332222
Q ss_pred HHHHHHH-HHHHHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhcc
Q 009563 350 VTINFLC-SVVYYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNN 425 (532)
Q Consensus 350 ~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 425 (532)
....... ....|..++.....+.+ ........+++.+++.++.+++.||+++|+.+..+..+.+++.+++....+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~ 288 (382)
T PRK10091 209 MFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGM 288 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhh
Confidence 2211111 11223333333222322 3334455667788999999999999999999888887777766555443332
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhHh-hhccccccchhhhhHHHHHHHHHHHHHHHHHHHH----H--hhhhhHHHHHHH
Q 009563 426 GIWKIVRMICGVMGIFGVAGTYNLLF-IYTTELFPTVVRNAALGCATQAAQLGAILAPFVV----V--LGGWLPFAVFAA 498 (532)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~--~~~~~~~~~~~~ 498 (532)
.. ...+..++.+++.....+... ....+..|++.++.+ ..+....+|..+||.+. . .++...+.+.++
T Consensus 289 ~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~ 363 (382)
T PRK10091 289 KT---ASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAAL 363 (382)
T ss_pred HH---HHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHH
Confidence 21 223333344444433333323 344454555555544 34566788999998877 2 245566666666
Q ss_pred HHHHHHHHHhhc
Q 009563 499 CGIIGGLFAFYL 510 (532)
Q Consensus 499 ~~~~~~~~~~~l 510 (532)
+.++.......+
T Consensus 364 ~~~~~~~~~~~~ 375 (382)
T PRK10091 364 LSFAAMSSLLLY 375 (382)
T ss_pred HHHHHHHHHHHH
Confidence 665555544433
No 47
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=4.7e-28 Score=237.89 Aligned_cols=331 Identities=17% Similarity=0.139 Sum_probs=230.8
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHh---h-----cchHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTA---F-----SPNYSTYV 185 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~---~-----~~~~~~l~ 185 (532)
.+.+|+|+ |..++|++.+++.+++.++++++|+++|| +|||++++.+.++..++.+... + .++++.++
T Consensus 41 ~l~~~lg~---s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (392)
T PRK12382 41 FVHHDLGF---GNTMVGIAVGIQFLATVLTRGYAGRLADQ-YGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLV 116 (392)
T ss_pred HHHHhcCC---cHHHHHHHHHHHHHHHHHHhhhhhHHHHh-hcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHH
Confidence 36789999 99999999999999999999999999999 9999999999888777654332 2 35789999
Q ss_pred HHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHh
Q 009563 186 VLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIIL 262 (532)
Q Consensus 186 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~ 262 (532)
++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+. |||+.+++..+..++.. ...
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~-~~~ 195 (392)
T PRK12382 117 VGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW-AFN 195 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH-HHH
Confidence 99999999999988888899999999999999999999999999999999988775 99988776555443322 111
Q ss_pred cccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHH
Q 009563 263 PFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLT 342 (532)
Q Consensus 263 ~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (532)
...||.+.. ++ .+ .+.++.++. .
T Consensus 196 ~~~~~~~~~---~~--------------------------------------~~--------------~~~~~~~~~--~ 218 (392)
T PRK12382 196 GTVRKVPAH---AG--------------------------------------ER--------------PSLWSVVGL--I 218 (392)
T ss_pred HhccCCCCC---cc--------------------------------------cC--------------chHHHHHHH--H
Confidence 222222100 00 00 000111110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCcc-hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHh
Q 009563 343 RIRLFLAVTINFLCSVVYYGISLNVVNLQT-NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSL 421 (532)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~ 421 (532)
+....................+.+..+.+. .........+++.+++.++.+++.||+++|+.+..+..+..++.+++..
T Consensus 219 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 298 (392)
T PRK12382 219 WKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWL 298 (392)
T ss_pred HHhHHHHHHHHHHHhHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHH
Confidence 110011111111111111111222222221 2223334455667788899999999999999988888877777766555
Q ss_pred hhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHH
Q 009563 422 VKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVF 496 (532)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~ 496 (532)
..+ .+ ..++..++.+++.+...+...+...|.+|++.|+++.|+.+....+|..++|.+. ..++...|.+.
T Consensus 299 ~~~--~~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~ 374 (392)
T PRK12382 299 APT--AW--VALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAG 374 (392)
T ss_pred ccc--HH--HHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 432 22 3445566777777777788888888999999999999999999999999998877 35677788888
Q ss_pred HHHHHHHHHHHhhc
Q 009563 497 AACGIIGGLFAFYL 510 (532)
Q Consensus 497 ~~~~~~~~~~~~~l 510 (532)
+++.+++.++.+..
T Consensus 375 ~~~~~~~~~~~~~~ 388 (392)
T PRK12382 375 AISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHhh
Confidence 87777776665433
No 48
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=1e-28 Score=240.63 Aligned_cols=321 Identities=13% Similarity=0.065 Sum_probs=242.7
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc-----hHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP-----NYSTYVVL 187 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~ 187 (532)
|.+..+++. +..+.|++.+++.++..++++++|+++|| +|||+++..+.++.+++.++.++++ +++.+++.
T Consensus 23 ~~~~~~~~~---s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (365)
T TIGR00900 23 PLYVLAGTG---SASVLSLAALAGMLPYVVLSPIAGALADR-YDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVL 98 (365)
T ss_pred HHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhhHHHHh-hchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 566677888 99999999999999999999999999999 9999999999999999998888887 99999999
Q ss_pred HHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcc
Q 009563 188 RMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 188 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.+++.+. +||+.|++.++..++..+..+..
T Consensus 99 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 99 AGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999998876 99999998887666654333222
Q ss_pred -cccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHH
Q 009563 265 -LPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTR 343 (532)
Q Consensus 265 -~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (532)
.||.++. ++.+. +++ ..++....++.+++++.++
T Consensus 179 ~~~~~~~~----~~~~~------------------------~~~-----------------~~~~~~~~~~~~~~~~~~~ 213 (365)
T TIGR00900 179 RIPELAAS----EIQAL------------------------SNA-----------------VLRDTREGIKFVLKNPLLR 213 (365)
T ss_pred ccccCCCc----ccccc------------------------chh-----------------HHHHHHhHHHHHHcCcHHH
Confidence 2222110 00000 000 0000112345667777766
Q ss_pred HHHHHHHHHHHHHHHHH-HHhhhcccc-Cc---chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHH
Q 009563 344 IRLFLAVTINFLCSVVY-YGISLNVVN-LQ---TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLL 418 (532)
Q Consensus 344 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~ 418 (532)
................. ...+.+..+ .+ ...........++.+++.++.+++.||++||+.+..+..+.+++.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 293 (365)
T TIGR00900 214 TLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILV 293 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH
Confidence 55554444444332222 333443332 22 22334445556777889999999999999999888877777777666
Q ss_pred HHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 419 GSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+.+..+ +. + ...+..++.+++.+...+...++..|..|++.|+++.|+.+....++..++|.+.
T Consensus 294 ~~~~~~-~~-~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~ 357 (365)
T TIGR00900 294 VGLTPP-NF-P-LFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILA 357 (365)
T ss_pred HHhhch-hH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665543 12 1 4566677888888888889999999999999999999999999999999998876
No 49
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=4.6e-28 Score=236.67 Aligned_cols=331 Identities=12% Similarity=0.081 Sum_probs=232.5
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.+++|+ |..+.|++.+.+.++..+++++.|+++|| +|||+++..+.++.+++.+++++++|++.+++.|+++|
T Consensus 30 p~~~~~~~~---s~~~~G~~~s~~~l~~~~~~~~~g~l~dr-~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 105 (381)
T PRK03633 30 PLWLAQEHL---PTWQVGVVSSSYFTGNLVGTLLAGYVIKR-IGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAG 105 (381)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 889999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHhcccccCch
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--TWRALYIASSIPSILFLLIILPFLPESPR 270 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--~wr~~f~~~~~~~~~~~~~~~~~~~esp~ 270 (532)
++.+...+.....+.+..++++|++++++...+.++|..+|+.+++.+. .++...+..+........+.+...++++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (381)
T PRK03633 106 IGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLAAILPLLFTRILNQQA 185 (381)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhcccCCCC
Confidence 9999988888888888899999999999999999999999999998876 22223333332222211111111111100
Q ss_pred hHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHH
Q 009563 271 WYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAV 350 (532)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (532)
+ + +...+.++.++++.++......+
T Consensus 186 ------~--------------------------------------~-----------~~~~~~~~~~~~~~~~~~~~~~~ 210 (381)
T PRK03633 186 ------E--------------------------------------N-----------HDSTSIWPMLKLRQARLGVNGCI 210 (381)
T ss_pred ------C--------------------------------------C-----------CCCCCHHHHHHhcchHHHHHHHH
Confidence 0 0 00012344566665543322222
Q ss_pred HHHHHHHHHHHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccch
Q 009563 351 TINFLCSVVYYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGI 427 (532)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (532)
.........+...+.+.++.+.+ .........+..+++.+..+++.||+++|+.+..+..+..++.+.+. . . .
T Consensus 211 ~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~-~ 286 (381)
T PRK03633 211 ISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-Q-A 286 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-h-H
Confidence 22222233333345554443332 23334455567788999999999999999988877777666555443 1 1 1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHH
Q 009563 428 WKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGII 502 (532)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~ 502 (532)
.......+.+++.....|...+.+.|..|++.++...+..+....+|..++|.+. ..++...|.+.+.+.++
T Consensus 287 ---~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~ 363 (381)
T PRK03633 287 ---AMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFI 363 (381)
T ss_pred ---HHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 1223344455555567788888889999988888888888888889999999877 34566677777666665
Q ss_pred HHHHHhh
Q 009563 503 GGLFAFY 509 (532)
Q Consensus 503 ~~~~~~~ 509 (532)
..+..+.
T Consensus 364 ~~~~~~~ 370 (381)
T PRK03633 364 YLLMLLR 370 (381)
T ss_pred HHHHHHh
Confidence 5444333
No 50
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=1.3e-28 Score=244.68 Aligned_cols=391 Identities=17% Similarity=0.139 Sum_probs=251.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHHH
Q 009563 52 WQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVGL 131 (532)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~~ 131 (532)
.+|..+..+.+.+.....+.....+. . |.+++ +|+ ++.+.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------------------------p~~~~-~g~---s~~~~g~ 65 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALA--------M--------------------------PYLVE-QGF---SKGELGF 65 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhh--------h--------------------------HHHHH-cCC---CHhHhHH
Confidence 35666666667777777776666665 3 56654 699 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc----chHHHHHHHHHHHHhhccccchhhhheee
Q 009563 132 VQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS----PNYSTYVVLRMLTGFSTGGVGLCAFVLAT 207 (532)
Q Consensus 132 ~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 207 (532)
+.+++.++..+++++.|+++|| +|||+.+..+.++.+++.++.++. ++++.+.+.|++.|++.+...+.....+.
T Consensus 66 ~~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~ 144 (438)
T TIGR00712 66 ALSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMV 144 (438)
T ss_pred HHHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHH
Confidence 9999999999999999999999 999999999999999998887764 46778889999999999999888889999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-h---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHH
Q 009563 208 EPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF-Q---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMK 283 (532)
Q Consensus 208 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l-~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~ 283 (532)
|++|+++|++++++.+.+..+|..+++.+.+.. . +||+.|++.+++.++..++.++++||+|+....+. .++.
T Consensus 145 ~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~-- 221 (438)
T TIGR00712 145 HWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPP-IEEY-- 221 (438)
T ss_pred HhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCC-chhc--
Confidence 999999999999999999999999988766543 2 89999999999888877677778888764210000 0000
Q ss_pred HHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccc-hhhhhcChHHHHHHHHHHHHHHHHHHHHHH
Q 009563 284 IMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGS-VIDVIKSPLTRIRLFLAVTINFLCSVVYYG 362 (532)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (532)
++ +.++ +..+ +.+. +...+.. .+.+++++.++...+...+...........
T Consensus 222 -------~~--~~~~------~~~~-----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (438)
T TIGR00712 222 -------RN--DYPD------DYNE-----KAEQ--------ELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDW 273 (438)
T ss_pred -------cc--cccc------cccc-----cccc--------ccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHh
Confidence 00 0000 0000 0000 0000001 123567776665544444444333233333
Q ss_pred hhhcccc-Ccch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHH---HHHHHHHhhhccchhHHHHHHH
Q 009563 363 ISLNVVN-LQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSG---FFCLLGSLVKNNGIWKIVRMIC 435 (532)
Q Consensus 363 ~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 435 (532)
.+.+..+ .+.+ .........+..+++.++.+++.||+++++....+..... ++.+.+......+.+ .....
T Consensus 274 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 351 (438)
T TIGR00712 274 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPL--VDMIC 351 (438)
T ss_pred HHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchH--HHHHH
Confidence 3444432 2322 2334455667788899999999999964432222222221 111221211111211 22222
Q ss_pred HHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHH-HHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHh-
Q 009563 436 GVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGA-ILAPFVV-----VLGGWLPFAVFAACGIIGGLFAF- 508 (532)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~-~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~- 508 (532)
.+..+++.............|.+|++.|+++.|+.+....+|+ +++|.+. ..|+...+++.+++.+++.+..+
T Consensus 352 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T TIGR00712 352 MIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 431 (438)
T ss_pred HHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 3333333222222223467799999999999999998888764 5677766 34667777777776666655543
Q ss_pred hccCCC
Q 009563 509 YLPETL 514 (532)
Q Consensus 509 ~l~~~~ 514 (532)
..+|.|
T Consensus 432 ~~~~~~ 437 (438)
T TIGR00712 432 VMIGEK 437 (438)
T ss_pred HHhhcc
Confidence 445543
No 51
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.8e-29 Score=244.64 Aligned_cols=365 Identities=16% Similarity=0.160 Sum_probs=263.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHH
Q 009563 51 PWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVG 130 (532)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~ 130 (532)
|..+.++..+++.++....|..+++.. . ...+.+|.++ ...+.+
T Consensus 41 K~dl~i~~~~~~~y~~~~~d~~si~~a--------~-------------------------l~g~~edl~~---~~~~l~ 84 (495)
T KOG2533|consen 41 KLDLFILPFLCYLYFHAYLDKSSIVNA--------S-------------------------LSGLKEDLKL---VGNQLG 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHhcchhcchhH--------H-------------------------HcCCccccch---hhhhhh
Confidence 445666666777777777776655544 0 1356789999 899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeeccc
Q 009563 131 LVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPV 210 (532)
Q Consensus 131 ~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 210 (532)
.+.++++++++++.+++|.+.|| ++..+.+....+++++..++....+|++.+++.|++.|+.++..+|....+++.|+
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r-~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy 163 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDR-FPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWY 163 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhc
Confidence 99999999999999999999999 99999999999999999989888999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHh-------h--chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHH
Q 009563 211 GPSKRGAAGMSTFYFFSTGIALLSGIAYIF-------Q--TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEA 281 (532)
Q Consensus 211 ~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l-------~--~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~ 281 (532)
.+++|++.++++....++|.++|.+++..+ . ||||.|++.+++.++..+++++++|+.|....-..+. |.
T Consensus 164 ~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~-ek 242 (495)
T KOG2533|consen 164 GKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDE-EK 242 (495)
T ss_pred ChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchH-HH
Confidence 999999999999999999999999998884 2 9999999999999999999999999998622111111 10
Q ss_pred HHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHH
Q 009563 282 MKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYY 361 (532)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (532)
+-..++.++.+... ..++..+..+++.+++|..+...+..++.........+
T Consensus 243 ~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~ 294 (495)
T KOG2533|consen 243 ELVVERLRESPSGG----------------------------IENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSY 294 (495)
T ss_pred HHHHHHHHhccCCC----------------------------cccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHH
Confidence 00011110000000 00003345788999999988888888877777776666
Q ss_pred Hhhhcccc-Ccc---hHHHHHHHHHHHHHHHHHHHHHHHhh----hCCchhHHHHHHHHHHHH-HHHHhhhccchhHHHH
Q 009563 362 GISLNVVN-LQT---NLYLNVLVNAVAEMPAFTITAVLLDK----LGRKPMTIGTLWFSGFFC-LLGSLVKNNGIWKIVR 432 (532)
Q Consensus 362 ~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~----~gr~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 432 (532)
..++++.+ .+. +.........++++++.+++|+++|| ..+|........+..+.. ..+... .... ..
T Consensus 295 ~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~-~~~~---~~ 370 (495)
T KOG2533|consen 295 WLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAA-AVLP---GA 370 (495)
T ss_pred HHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhh-ccch---HH
Confidence 77776666 212 23344566778899999999999999 445555444444443333 333333 2222 23
Q ss_pred HHHHHHHHHHHHhhhhhHhhhccccccchhhhhH-HHHHHHHHHHHHHHHHHHH
Q 009563 433 MICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAA-LGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~-~g~~~~~~~~g~~i~p~~~ 485 (532)
....+....+.....+......++......|... .+........+++++|.+.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~ 424 (495)
T KOG2533|consen 371 YGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLF 424 (495)
T ss_pred hHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhc
Confidence 3334444555566667777888887766555544 4444445566677777766
No 52
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=8.2e-28 Score=236.45 Aligned_cols=337 Identities=13% Similarity=0.107 Sum_probs=226.0
Q ss_pred CCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 009563 112 GSSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLT 191 (532)
Q Consensus 112 ~~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 191 (532)
+|.+.++++. +..+.++..+++.++++++++++|+++|| +|||++++.+.+++++++++++++++++.++++|+++
T Consensus 39 l~~i~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 114 (413)
T PRK15403 39 IINVVRDFNA---DVSLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQ 114 (413)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3889999999 99999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccC
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPES 268 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~es 268 (532)
|++.+...+....++.|++++++|++++++...+..+|..++|.+++.+. +||+.|++.+++.++..+..++.+||+
T Consensus 115 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 115 GTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99998777777888999999999999999999999999999999998776 999999999988887765556677886
Q ss_pred chhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHH
Q 009563 269 PRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFL 348 (532)
Q Consensus 269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (532)
++. +++... .+.....++++++++.++...+.
T Consensus 195 ~~~---~~~~~~---------------------------------------------~~~~~~~~~~ll~~~~~~~~~l~ 226 (413)
T PRK15403 195 VKR---GAVPFS---------------------------------------------AKSVLRDFRNVFRNRLFLTGAAT 226 (413)
T ss_pred ccc---cCCCCC---------------------------------------------hHHHHHHHHHHHcCHHHHHHHHH
Confidence 420 000000 00001245677888877765555
Q ss_pred HHHHHHHHHHHHHHhhhccccC-cchHH---HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhh--
Q 009563 349 AVTINFLCSVVYYGISLNVVNL-QTNLY---LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLV-- 422 (532)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~-- 422 (532)
..+............|.+..+. +.+.. ........+.+++..+.+.+.++..+++.......+..++.+++...
T Consensus 227 ~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~ 306 (413)
T PRK15403 227 LSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNL 306 (413)
T ss_pred HHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 4444433333333334443332 33222 22233344555666666666654444343322222222222222211
Q ss_pred hccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH----HhhhhhHHHHHHH
Q 009563 423 KNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV----VLGGWLPFAVFAA 498 (532)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~~~~~~~~~~~~~ 498 (532)
.....++ ..++..++.+++.+...|.......... ...+|++.++.+.....+..+++... ..+...+|...++
T Consensus 307 ~~~~~~~-~~~~~~~l~~~G~~~~~p~~~~~al~~~-~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 384 (413)
T PRK15403 307 LWPHVWL-WSVLGTSLYAFGIGLIFPTLFRFTLFSN-NLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAV 384 (413)
T ss_pred HccccHH-HHHHHHHHHHHHHHHHhHHHHHHHhccC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 1111111 2345666677777777776664332221 12368888888877766666655554 3345555555554
Q ss_pred HHHH
Q 009563 499 CGII 502 (532)
Q Consensus 499 ~~~~ 502 (532)
+..+
T Consensus 385 ~~~~ 388 (413)
T PRK15403 385 VAGV 388 (413)
T ss_pred HHHH
Confidence 4443
No 53
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=1.4e-29 Score=248.10 Aligned_cols=337 Identities=19% Similarity=0.127 Sum_probs=231.6
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.+++|+ +..+.|++.+++.++..+++++.|+++|| +|||+++.++.++.+++.++.+++++++.+++.|++.|
T Consensus 19 ~~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 94 (379)
T TIGR00881 19 PYLVEEIGL---SKTDLGLLLSSFSIAYGISKFVMGSVSDR-SNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNG 94 (379)
T ss_pred HHHHHHhCC---CHhHHHHHHHHHHHHHHhhhhhhhHHHHh-hCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 889999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHH-HHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccC
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLS-GIAYIFQ---TWRALYIASSIPSILFLLIILPFLPES 268 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~-~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~es 268 (532)
++.+...+...+++.|++|+++|+++.++...+..+|..+++ .++..+. +||+.|++.+++.++..++.+++.||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 95 IFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred hhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCC
Confidence 999999999999999999999999999999999999999999 4555544 999999999888877776777778887
Q ss_pred chhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHH
Q 009563 269 PRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFL 348 (532)
Q Consensus 269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (532)
|+....+.+.+ ..+++ .+...++.+ ++.+..+...+.+++++.++...+.
T Consensus 175 ~~~~~~~~~~~---------------~~~~~--------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (379)
T TIGR00881 175 PQSCGLPPAEE---------------MPNEE--------PDGDAEKKE-------EELTKKQIFLQYVLLNKVLWYISLG 224 (379)
T ss_pred ccccccCcccc---------------Ccccc--------ccccccccc-------ccccchHHHHHHHHhcchHHHHHHH
Confidence 64210000000 00000 000000000 0000111234566777766655444
Q ss_pred HHHHHHHHHHHHHHhhhcc-ccCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chhHHH-HH-HHHHHHHHHHHh
Q 009563 349 AVTINFLCSVVYYGISLNV-VNLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGR-KPMTIG-TL-WFSGFFCLLGSL 421 (532)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr-~~~~~~-~~-~~~~~~~~~~~~ 421 (532)
.+.............+.+. +..+. ..........++.+++.++.+++.||..+ |+.... .. ....++......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (379)
T TIGR00881 225 YVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL 304 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Confidence 4444433332222233332 22222 23344455567788999999999998643 332222 21 111222222221
Q ss_pred hhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 422 VKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
....... ...+..++.++......+....+..|.+|++.|+++.|+.+....+|+.++|.+.
T Consensus 305 ~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 366 (379)
T TIGR00881 305 NPAANPL--MDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPL 366 (379)
T ss_pred CcchhHH--HHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhH
Confidence 1111211 2334444455544455566677889999999999999999999999999998876
No 54
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=1.2e-27 Score=236.44 Aligned_cols=342 Identities=15% Similarity=0.097 Sum_probs=239.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHH
Q 009563 51 PWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVG 130 (532)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~ 130 (532)
+.....++.+++.++.-+++....... . |.+++++|+ +..+.|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------------------------p~i~~~~~~---s~~~~g 64 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDIL--------L--------------------------PQFQQAFTL---TNFQAG 64 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------HHHHHHhCC---CHHHHH
Confidence 334455555666667767777766666 4 899999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHH---hhcchHHHHHHHHHHHHhhccccchhhhheee
Q 009563 131 LVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLT---AFSPNYSTYVVLRMLTGFSTGGVGLCAFVLAT 207 (532)
Q Consensus 131 ~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 207 (532)
++.+.+.+++.+++++.|++.|| +|||+++.++.++++++++++ .++++++.++++|+++|+|.|...+....++.
T Consensus 65 l~~~~~~~g~~i~~~~~g~l~dr-~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~ 143 (438)
T PRK10133 65 LIQSAFYFGYFIIPIPAGILMKK-LSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVT 143 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 99999999999999999999999 999999999999999999885 46899999999999999999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----------------------------chHHHHHHHH-HHHHHH
Q 009563 208 EPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ-----------------------------TWRALYIASS-IPSILF 257 (532)
Q Consensus 208 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-----------------------------~wr~~f~~~~-~~~~~~ 257 (532)
|+.++++|.+.+++.+..+.+|..+++.++..+. +||++|+... +..++.
T Consensus 144 ~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~ 223 (438)
T PRK10133 144 VLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVA 223 (438)
T ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9887777777899999999999999988765321 5666665433 333333
Q ss_pred HHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhh
Q 009563 258 LLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVI 337 (532)
Q Consensus 258 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (532)
.++....+||.+.. +++ + ++........++++
T Consensus 224 ~~~~~~~~p~~~~~---~~~-~--------------------------------------------~~~~~~~~~~~~ll 255 (438)
T PRK10133 224 LLIMLTKFPALQSD---NHS-D--------------------------------------------AKQGSFSASLSRLA 255 (438)
T ss_pred HHHHHhcCCCCCcc---ccc-c--------------------------------------------ccccchhhhHHHHH
Confidence 32223334432110 000 0 00000112345677
Q ss_pred cChHHHHHHHHHHHHHHHHHHH-HHHhhhccc-cCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHH
Q 009563 338 KSPLTRIRLFLAVTINFLCSVV-YYGISLNVV-NLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFS 412 (532)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~ 412 (532)
++|.++...+..++........ .|..++..+ ..+.+ .........++.++|+++++++.||+++|+++..+..+.
T Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~ 335 (438)
T PRK10133 256 RIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIA 335 (438)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 8887665444433333332222 222223222 22332 334446667788899999999999999999988887777
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 413 GFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
.+.+++..+.... ..+....+.+++.+..+|..++...+..|++ .+++.++..+ ..+|+.++|.+.
T Consensus 336 ~~~~~~~~~~~~~-----~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~ 401 (438)
T PRK10133 336 MALCLISAFAGGH-----VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVM 401 (438)
T ss_pred HHHHHHHHHcCCh-----HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHH
Confidence 6666555443321 2345567789999999999999999998764 5777777764 446666666655
No 55
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=8.7e-28 Score=234.82 Aligned_cols=339 Identities=12% Similarity=0.002 Sum_probs=232.7
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
+.+.+|++. +..+.+++.+.+.+++.++.+++|+++|| +|||++++++.++.++++++++++.+. ++.|+++|
T Consensus 27 ~~~~~~~~~---s~~~~~~~~~~~~l~~~l~~~~~G~laDr-~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G 99 (393)
T PRK11195 27 IALLKELHY---PDWSQPLLQMFFVLAYIVLAPFVGAFADS-FPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVG 99 (393)
T ss_pred HHHHHHcCC---cHHHHHHHHHHHHHHHHHHHhhhhHhhhc-cCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 455788888 89999999999999999999999999999 999999999999999999888777664 78899999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHhcccccCch
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--TWRALYIASSIPSILFLLIILPFLPESPR 270 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--~wr~~f~~~~~~~~~~~~~~~~~~~esp~ 270 (532)
++.+...|...+++.|++|+++|+++.++.+....+|.++||.+++++. .|+..+.+.+...++.. +..+.+||+|.
T Consensus 100 ~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~-~~~~~l~~~~~ 178 (393)
T PRK11195 100 IGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAA-LFNLFIPRLGA 178 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCcc
Confidence 9999999999999999999999999999999999999999999999987 55556655554444333 45567787653
Q ss_pred hHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHH
Q 009563 271 WYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAV 350 (532)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (532)
....++ .+ ..+..+ ..+...+.+++++..+.......
T Consensus 179 ~~~~~~-~~-~~~~~~-----------------------------------------~~~~~~~~l~~~~~~~~~~~~~~ 215 (393)
T PRK11195 179 RRPGQS-WN-PIALLR-----------------------------------------DFFHACRVLWRDKLGRFSLAGTT 215 (393)
T ss_pred cccccC-CC-HHHHHH-----------------------------------------HHHHHHHHHHhCchhHHHHHHHH
Confidence 110000 00 000000 00012345667776554444443
Q ss_pred HHHHHHHHHHHHhhhcccc-C---cchHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccc
Q 009563 351 TINFLCSVVYYGISLNVVN-L---QTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNG 426 (532)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (532)
+.+.......+..+.+.++ . ....+......+++.+++.++.+++.||.++++.+..+.. .++..+.+.... +
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~--~ 292 (393)
T PRK11195 216 LFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH--S 292 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh--H
Confidence 3333333333333333322 1 2234444556667888899999999999888877766643 333333333221 2
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchh-hhhHHHHHHHHHHHHHHHHHHHH----HhhhhhHHHHHHHHHH
Q 009563 427 IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVV-RNAALGCATQAAQLGAILAPFVV----VLGGWLPFAVFAACGI 501 (532)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-r~~~~g~~~~~~~~g~~i~p~~~----~~~~~~~~~~~~~~~~ 501 (532)
.+ ...+..++.+++.+...+...+...+..|++. +|++.++.+...+++..++..+. ..|-...+++.++..+
T Consensus 293 ~~--~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (393)
T PRK11195 293 LL--PAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLL 370 (393)
T ss_pred HH--HHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 21 34455556777777767777777788766654 79999999999999988877666 4444455555555444
Q ss_pred HHHHHH
Q 009563 502 IGGLFA 507 (532)
Q Consensus 502 ~~~~~~ 507 (532)
++..+.
T Consensus 371 ~~~~~~ 376 (393)
T PRK11195 371 VALAMA 376 (393)
T ss_pred HHHHHH
Confidence 444443
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=2e-27 Score=232.39 Aligned_cols=337 Identities=16% Similarity=0.144 Sum_probs=236.0
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHH-HHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTV-VCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
.+++++|. |..+.|++.+++.++..+.+++.|.++|| +|||+.++. +.++..++.++++++++++.+++.|++.|
T Consensus 23 ~l~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 98 (375)
T TIGR00899 23 FLSEEVRA---RPAMIGLFYTGSAIVGIAVSQLLATRSDY-QGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLS 98 (375)
T ss_pred HHHcccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 46789999 99999999999999999999999999999 999887654 56666777888899999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHH--HHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhccccc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAA--GMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPE 267 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~e 267 (532)
.+.+...|...+++.|+.|+++|++. .+....+.++|..+++.+++.+. +||+.|++.+++.++..++.++++||
T Consensus 99 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 178 (375)
T TIGR00899 99 SFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPS 178 (375)
T ss_pred hhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 88888888888888899887777754 57788888999999999988876 99999999998877777666677888
Q ss_pred CchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHH
Q 009563 268 SPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLF 347 (532)
Q Consensus 268 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (532)
.|++...+. . ..+.++.++++.++....
T Consensus 179 ~~~~~~~~~--------------------------------------~--------------~~~~~~~~~~~~~~~~~~ 206 (375)
T TIGR00899 179 YPRGAPGAL--------------------------------------T--------------RLEVRGLLASRDTRLLFV 206 (375)
T ss_pred cccCccccc--------------------------------------C--------------cchhhhhhcCcchHHHHH
Confidence 763110000 0 001112344444443333
Q ss_pred HHHHHHHHHHHHHHHhhhcc-ccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhh
Q 009563 348 LAVTINFLCSVVYYGISLNV-VNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVK 423 (532)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~ 423 (532)
..+..+..........+.+. ...+.+. ...........+++.++.+++.||++||+.+..+.++..+....+....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~ 286 (375)
T TIGR00899 207 ACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN 286 (375)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 33333322222222222222 2222222 2222233344566788999999999999988777665555444433322
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHH
Q 009563 424 NNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAA 498 (532)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~ 498 (532)
+ .+ ...+..++.+++.+...+....+..|..|++ ++++.++.+...++|..++|.+. ..++...+++.++
T Consensus 287 ~--~~--~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~ 361 (375)
T TIGR00899 287 S--LW--ALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIV 361 (375)
T ss_pred H--HH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 2 11 3444556667777777788888888988765 57999999999999999998877 3456777888887
Q ss_pred HHHHHHHHHhhcc
Q 009563 499 CGIIGGLFAFYLP 511 (532)
Q Consensus 499 ~~~~~~~~~~~l~ 511 (532)
+.+++.++..+++
T Consensus 362 ~~~~~~~~~~~~~ 374 (375)
T TIGR00899 362 MLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHheec
Confidence 7777777666554
No 57
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=9.6e-28 Score=237.39 Aligned_cols=338 Identities=19% Similarity=0.168 Sum_probs=242.6
Q ss_pred Cceeecccccchhhh-----HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKY-----KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVL 187 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~-----~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 187 (532)
|.+.+++|+ +.. ..|++.+++.++..+++++.|+++|| +|||+++..+.++.+++.++++++++++.+++.
T Consensus 38 ~~~~~~~g~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (408)
T PRK09874 38 PLYVEQLGV---TGHSALNMWSGLVFSITFLFSAIASPFWGGLADR-KGRKIMLLRSALGMGIVMVLMGLAQNIWQFLIL 113 (408)
T ss_pred HHHHHHhCC---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 777888888 543 35899999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcc
Q 009563 188 RMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 188 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
|++.|++.+ ..+....++.|++|+++|+++.++...+..+|..+++.+++.+. +||+.|++.+++.++..+..+++
T Consensus 114 ~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (408)
T PRK09874 114 RALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFC 192 (408)
T ss_pred HHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999765 46777788899999999999999999999999999999998875 99999999998877776566666
Q ss_pred cccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHH
Q 009563 265 LPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRI 344 (532)
Q Consensus 265 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (532)
+||.++.. ++.++ .+ .....+.++++..+.
T Consensus 193 ~~~~~~~~---~~~~~-~~----------------------------------------------~~~~~~~~~~~~~~~ 222 (408)
T PRK09874 193 IRENFQPV---SKKEM-LH----------------------------------------------MREVVTSLKNPKLVL 222 (408)
T ss_pred hccCcccc---cchhh-hH----------------------------------------------HHHHHHhCcCCchHH
Confidence 77653210 00000 00 001122334444333
Q ss_pred HHHHH-HHHHHHHHHHHHHhhhccccC---cch----HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHH
Q 009563 345 RLFLA-VTINFLCSVVYYGISLNVVNL---QTN----LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFC 416 (532)
Q Consensus 345 ~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~ 416 (532)
..... ..............+.+..+. ..+ ........+++.+++.+..+++.||++||+.+..+..+..++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 302 (408)
T PRK09874 223 SLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLL 302 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Confidence 22221 111111111111111111111 111 1122223345666788889999999999999888877776666
Q ss_pred HHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----Hhhhhh
Q 009563 417 LLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWL 491 (532)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~ 491 (532)
+.+....+ .+ ...+..++.+++.+...+...+...+..|++.+++..++.+....+|..++|.+. ..++..
T Consensus 303 ~~~~~~~~--~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~ 378 (408)
T PRK09874 303 IPMSFVQT--PL--QLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRA 378 (408)
T ss_pred HHHHHhcc--HH--HHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhH
Confidence 55544332 21 3445566778888888888888888889999999999999999999999999887 346778
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 009563 492 PFAVFAACGIIGGLFAFY 509 (532)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~ 509 (532)
.|++.+++.+++.++.++
T Consensus 379 ~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 379 VFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888888777766544
No 58
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=7.6e-28 Score=220.97 Aligned_cols=370 Identities=15% Similarity=0.077 Sum_probs=277.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHH
Q 009563 51 PWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVG 130 (532)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~ 130 (532)
+.+++.+.+..+.........+..+.+ . +.|.+|+|+ |+.|.+
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l--------~--------------------------~~i~~~~~L---S~~q~~ 52 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPL--------G--------------------------VFIKSDFGL---SEGQKG 52 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHH--------H--------------------------hhhccccCC---CHHHHH
Confidence 445666666666655556666666666 3 788899999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcch---HHHHHHHHHHHHhhccccchhhhheee
Q 009563 131 LVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPN---YSTYVVLRMLTGFSTGGVGLCAFVLAT 207 (532)
Q Consensus 131 ~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~i~ 207 (532)
++.++..+..++..++.|.+.|| ||.|++..++.++..+-++..+++.+ ++++++.+++.|++ |..+.+...+++
T Consensus 53 ll~aiPil~GallRl~~g~l~dr-fGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s 130 (417)
T COG2223 53 LLVAIPILVGALLRLPYGFLTDR-FGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNAS 130 (417)
T ss_pred HHHHHHHHHhHHHHHHHHhhhcc-cCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehccccccc
Confidence 99999999999999999999999 99999999999999999999998854 45999999999996 566888999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---c---hHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHH
Q 009563 208 EPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---T---WRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEA 281 (532)
Q Consensus 208 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~---wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~ 281 (532)
+|+|++++|.++|+.. ..++|..+...++..+. + ||....+..+..++..+..++.+.|.|......++..
T Consensus 131 ~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~-- 207 (417)
T COG2223 131 FFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL-- 207 (417)
T ss_pred ccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc--
Confidence 9999999999999999 88999988888777766 6 9999999999888888788888888764211000000
Q ss_pred HHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHH-HHHH
Q 009563 282 MKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLC-SVVY 360 (532)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 360 (532)
+..++.+++++..|...+..+..+... .+..
T Consensus 208 ------------------------------------------------~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~ 239 (417)
T COG2223 208 ------------------------------------------------PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSA 239 (417)
T ss_pred ------------------------------------------------hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHH
Confidence 023456777777776655554444332 3333
Q ss_pred HHhhhccccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccc---hhHHHHHH
Q 009563 361 YGISLNVVNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNG---IWKIVRMI 434 (532)
Q Consensus 361 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 434 (532)
+...++..+++.+. ........+.+.+.+.++|+++||+|.++.+......++++..+..+..... ...+..+.
T Consensus 240 ~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 319 (417)
T COG2223 240 YLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVA 319 (417)
T ss_pred HHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHH
Confidence 33333333444332 2333444455667888999999999999999999999999888888765222 22223444
Q ss_pred HHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh-hhhHHHHHHHHHHHHHHHHh
Q 009563 435 CGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLG-GWLPFAVFAACGIIGGLFAF 508 (532)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~-~~~~~~~~~~~~~~~~~~~~ 508 (532)
..+...+..+......+-++...+|.+ .|.+.|+....+.+|++.-|... ..| +...|+++..+.+++.+...
T Consensus 320 ~~l~l~~~~G~GnGsvfk~Ip~if~~~-~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 320 VFLALFVFAGLGNGSVFKMIPVIFPKE-TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred HHHHHHHHhccCcchheeechHHHHhh-hhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 455556666777778888888888764 59999999999999998888777 334 66778888888888777665
Q ss_pred hcc
Q 009563 509 YLP 511 (532)
Q Consensus 509 ~l~ 511 (532)
.+.
T Consensus 399 ~~y 401 (417)
T COG2223 399 ALY 401 (417)
T ss_pred HHH
Confidence 543
No 59
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=1.5e-27 Score=233.42 Aligned_cols=323 Identities=13% Similarity=0.122 Sum_probs=227.3
Q ss_pred CCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH
Q 009563 110 GDGSSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRM 189 (532)
Q Consensus 110 ~~~~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 189 (532)
|.+|.+.+++|+ ++.+.+++.+++.++..++.+++|+++|| +|||+++..+.++.+++.+++.++++++.+++.|+
T Consensus 12 p~~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 87 (377)
T PRK11102 12 PALPVIAADFGV---SAGSVQMTLSAYILGFAIGQLFYGPMADS-FGRKPVILGGTLVFALAAVACALAQTIDQLIYMRF 87 (377)
T ss_pred ccHHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhchHHhh-cCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 445899999999 99999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
+.|++.+...+...+++.|++|+++|++++++......+|..+++.+++.+. +||+.|++.+++.++..++..+++|
T Consensus 88 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (377)
T PRK11102 88 LHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIP 167 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999988776 9999999988888777656666777
Q ss_pred cCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHH
Q 009563 267 ESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRL 346 (532)
Q Consensus 267 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (532)
|+++.. ++. +.+.+ ....++++.++++..+...
T Consensus 168 ~~~~~~---~~~-------------------------------------~~~~~-------~~~~~~~~~~~~~~~~~~~ 200 (377)
T PRK11102 168 ETLPKE---RRQ-------------------------------------PFHLR-------TTIRNFASLFRHKRVLGYM 200 (377)
T ss_pred ccCccc---ccC-------------------------------------CCChH-------HHHHHHHHHHcChHHHHHH
Confidence 754210 000 00000 0011344567776655433
Q ss_pred HHHHHHHHHHHHHH-HHhhhccccCc---chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhh
Q 009563 347 FLAVTINFLCSVVY-YGISLNVVNLQ---TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLV 422 (532)
Q Consensus 347 ~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~ 422 (532)
+...+......... +...++.+..+ .+.........+..+++.++.+++.||+|||+.+..+..+..+..+.+...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 280 (377)
T PRK11102 201 LASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVS 280 (377)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322222221111 11112222222 223344455567778899999999999999998887776544433332222
Q ss_pred h-ccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHH-HHHHHHHHHHH
Q 009563 423 K-NNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAA-QLGAILAPFVV 485 (532)
Q Consensus 423 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~-~~g~~i~p~~~ 485 (532)
. .....+ ...+...+...+.+...+.......|..| +.++++.++.+... .+|..+++.+.
T Consensus 281 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 281 ALLDLGFW-ALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHhhhHH-HHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111111 22233333333444445555666777776 77899999987764 36667777665
No 60
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=3.3e-27 Score=231.85 Aligned_cols=328 Identities=13% Similarity=0.092 Sum_probs=225.5
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.+++|. +..+.++..+.+.++..+++++.|+++|| +|||+++..+.++..++.+++.++++++.+++.|+++|
T Consensus 27 p~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g 102 (392)
T PRK10473 27 PRIAADLNA---SEAQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQG 102 (392)
T ss_pred HHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 889999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+. +||+.|++.++..++..++..+++||++
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 103 IGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999988765 9999999998888777766667777764
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
+.. +++.. ......++.++++.++......
T Consensus 183 ~~~--~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 212 (392)
T PRK10473 183 PAR--APAAS------------------------------------------------SKPRENSESLLNRFFLSRLVIT 212 (392)
T ss_pred Ccc--cCCcc------------------------------------------------chHHHHHHHHhCHHHHHHHHHH
Confidence 210 00000 0000123455666555443333
Q ss_pred HHHHHHHHHHHHHhhhc-cccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhcc
Q 009563 350 VTINFLCSVVYYGISLN-VVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNN 425 (532)
Q Consensus 350 ~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 425 (532)
..............+.+ ....+.+ ........+++.+++.++.+++.||++||+.+..+..+..++.+.+......
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (392)
T PRK10473 213 TLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSH 292 (392)
T ss_pred HHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222211111111222 1222222 2333445567778899999999999999999888888777777666654332
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchh-hhhHHHHHHHHHHHHHHHHHHHH-HhhhhhHHHHHHHHH
Q 009563 426 GIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVV-RNAALGCATQAAQLGAILAPFVV-VLGGWLPFAVFAACG 500 (532)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-r~~~~g~~~~~~~~g~~i~p~~~-~~~~~~~~~~~~~~~ 500 (532)
. .......+...+.+..++.... .+..|.+. .+.+.++......+|..+++.+. ..++.....+.+.+.
T Consensus 293 ~----~~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 293 A----VSLFGITLICAGFSVGFGVAMS--QALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred H----HHHHHHHHHHHHHHHHhHHHHH--HHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 2 2223333333333333333322 33334333 35555555555566677776666 455444344444333
No 61
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4.9e-27 Score=228.68 Aligned_cols=355 Identities=15% Similarity=0.178 Sum_probs=257.6
Q ss_pred eecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc--hHHHHHHHHHHHHh
Q 009563 116 VTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP--NYSTYVVLRMLTGF 193 (532)
Q Consensus 116 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~ 193 (532)
..++++ ++.+.|++.+.++.|+.+++++.|+++|| +|.|+++..+.++.++++++...+- +++.+++.|+++|+
T Consensus 65 ~~~~~w---s~~~k~~i~ss~~~G~i~~~iP~g~l~~k-~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 65 AGEYDW---SSTEKGLIFSSFFWGYILGQIPGGYLADK-FGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGL 140 (466)
T ss_pred CceecC---CHHHHHHHHHHHHHHHHHHHcCcHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHH
Confidence 678999 99999999999999999999999999999 9999999999999999999998874 55678999999999
Q ss_pred hccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 194 STGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 194 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
+.|..+|+...+...|.|++||++..++...+..+|.+++.++++.+. ||+++|++.++.+++..++.+++..|+|
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P 220 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSP 220 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999998886 9999999999999999977777788888
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
.... .-..+|. +++.+... ....+++.+.+++++++++.+|...+..
T Consensus 221 ~~h~-~is~~El----~~I~~~k~----------------------------~~~~~~~~~vP~~~i~ts~~vwai~~~~ 267 (466)
T KOG2532|consen 221 SKHP-NISEKEL----KYIEKGKS----------------------------EAHVKKKPPVPYKAILTSPPVWAIWISA 267 (466)
T ss_pred ccCC-CCCHHHH----HHHHhccc----------------------------ccccCCCCCCCHHHHHcCHHHHHHHHHH
Confidence 5311 0111111 11111000 0000111456899999999877666555
Q ss_pred HHHHHHHHHHHHHhhhcccc-Ccch---HHHHHHHHHHHHHHHHHHHHHHHhhhCC---------chhHHHHHHHHHHHH
Q 009563 350 VTINFLCSVVYYGISLNVVN-LQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGR---------KPMTIGTLWFSGFFC 416 (532)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr---------~~~~~~~~~~~~~~~ 416 (532)
+.............|.++.+ ++.+ .+....+..+...+..+++|.++||+.+ |..-.++....++++
T Consensus 268 f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l 347 (466)
T KOG2532|consen 268 FGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFL 347 (466)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHH
Confidence 55554444444444444432 3333 2333444456677888999999999755 223356677777777
Q ss_pred HHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH--------Hhh
Q 009563 417 LLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV--------VLG 488 (532)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~--------~~~ 488 (532)
+.+.+......+ ..+++..+.....+...+....-..+.. +++.+..+|+.+....+.++++|.+. ...
T Consensus 348 ~~l~~~~~~~~~--~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~e 424 (466)
T KOG2532|consen 348 LVLAFTSDEHRL--LAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREE 424 (466)
T ss_pred HeeeecCCCcch--HHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHH
Confidence 777777665542 2222222222222222233333333334 56779999999999999999999998 124
Q ss_pred hhhHHHHHHHHHHHHHHHHhhc
Q 009563 489 GWLPFAVFAACGIIGGLFAFYL 510 (532)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~l 510 (532)
+...|++.+++.+++.++..+.
T Consensus 425 W~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 425 WRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHhchheeEe
Confidence 6778888888888887666554
No 62
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.1e-30 Score=241.23 Aligned_cols=354 Identities=16% Similarity=0.162 Sum_probs=245.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhhHHH
Q 009563 51 PWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKYKVG 130 (532)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~ 130 (532)
+..++.++++++..+++..|.+.++.. . +.+++.||+ +++..|
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv--------~--------------------------~~v~~~fni---~~s~~G 71 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGV--------L--------------------------KEVQTYFNI---SDSELG 71 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhh--------h--------------------------HHHHHhcCC---Cchhcc
Confidence 445677888889999999999888777 5 899999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeeccc
Q 009563 131 LVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPV 210 (532)
Q Consensus 131 ~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 210 (532)
++.+.+.+.+.+++++.|+++|| |.||+++.+|..++.++.++++++..||+++++|.+.|+|.+.+.++++.+++|.+
T Consensus 72 ll~~vf~v~~~i~sPl~gyLadr-yNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f 150 (493)
T KOG1330|consen 72 LLQTVFIVVFMIASPLFGYLADR-YNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSF 150 (493)
T ss_pred chhHHHHHHHHHHHHHHHHHHhh-cCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcC
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHH
Q 009563 211 GPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMR 286 (532)
Q Consensus 211 ~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~ 286 (532)
|..+|++++++++.+..+|..+|.+.+..+. .|||.|+..+++++++.++..++++|++|- ..++..
T Consensus 151 ~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg-----a~~~~~---- 221 (493)
T KOG1330|consen 151 PDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG-----ARDEVD---- 221 (493)
T ss_pred cchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccc-----cccccc----
Confidence 9999999999999999999999999888877 599999999999999998889999987531 000000
Q ss_pred HHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHH-HHHHhh-
Q 009563 287 AIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSV-VYYGIS- 364 (532)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 364 (532)
++..+ ........++.+.+.+++.+....+......+.... .++...
T Consensus 222 ------~~~~~-------------------------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~ 270 (493)
T KOG1330|consen 222 ------GENKM-------------------------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAF 270 (493)
T ss_pred ------cCCcC-------------------------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhH
Confidence 00000 000111223445555555544444444444333221 111111
Q ss_pred ----hccccCcc-hHHHHHHHHHHHHHHHHHHHHHHHhhhCCc----hhHH----HHH---HHHHHHHHHHHhhhccchh
Q 009563 365 ----LNVVNLQT-NLYLNVLVNAVAEMPAFTITAVLLDKLGRK----PMTI----GTL---WFSGFFCLLGSLVKNNGIW 428 (532)
Q Consensus 365 ----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~----~~~~----~~~---~~~~~~~~~~~~~~~~~~~ 428 (532)
+.+..... .......+...++.+|.+++|.++||+.|+ .... .+. .+.+.+..+.........
T Consensus 271 ~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~- 349 (493)
T KOG1330|consen 271 IYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSM- 349 (493)
T ss_pred HHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHH-
Confidence 11111122 222334455567788888999999984321 1111 111 111111222111122111
Q ss_pred HHHHHHHHHHHHH-HHHhhhhhHhhhccccccchhhhhHHHHHHHHHHH-HHHHHHHHH
Q 009563 429 KIVRMICGVMGIF-GVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQL-GAILAPFVV 485 (532)
Q Consensus 429 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-g~~i~p~~~ 485 (532)
...+.+++.+. .....++...-+..|+.|++.|.++.++...+..+ |.+-+|++.
T Consensus 350 --~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~iv 406 (493)
T KOG1330|consen 350 --IFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIV 406 (493)
T ss_pred --HHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCccee
Confidence 22233333333 33334456667888999999999999999877654 444455343
No 63
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=9.4e-27 Score=229.39 Aligned_cols=313 Identities=15% Similarity=0.087 Sum_probs=224.6
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.+++|+ ++.+.+++.+++.++..++++++|+++|| +|||+++..+.++..++.++++++++++.+++.|+++|
T Consensus 30 ~~i~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 105 (401)
T PRK11043 30 KAIQADLQT---SASAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQA 105 (401)
T ss_pred HHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 788999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
++.+...+...+++.|+++++++++..+.......+|..++|.+++.+. +||+.|++.+++.++..+ ..++++|++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~ 184 (401)
T PRK11043 106 VGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLIL-PTLRLKPSK 184 (401)
T ss_pred hhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-HHHHcCCCC
Confidence 9988888888889999999999999999988889999999999998876 999999998888777663 344455443
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
+. ++.+ +.+.+++++++++.++...+..
T Consensus 185 ~~----~~~~------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 212 (401)
T PRK11043 185 KA----RKQS------------------------------------------------QDALTFKQLLKSKTYLGNVLIF 212 (401)
T ss_pred Cc----cccc------------------------------------------------hHHHHHHHHHcChhHHHHHHHH
Confidence 10 0000 0001345566776655433322
Q ss_pred HHHHHHHHHHHHHhhhccccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhh---h
Q 009563 350 VTINFLCSVVYYGISLNVVNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLV---K 423 (532)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~---~ 423 (532)
..............+.+..+.+.+. ........++.+++.++.+++.||+++|+..........++.+.+... .
T Consensus 213 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (401)
T PRK11043 213 AACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS 292 (401)
T ss_pred HHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2222221111122233333333322 222333445667888889999999998887655544444433332221 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 424 NNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
.... + ..++...+.+++.+..++.......+..| +.++++.|+.+.....++..++.+.
T Consensus 293 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~ 351 (401)
T PRK11043 293 HPSL-V-PLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLV 351 (401)
T ss_pred cCcH-H-HHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 1 33444556677777888888887777776 4689999999998887777777776
No 64
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=7.3e-27 Score=229.66 Aligned_cols=345 Identities=14% Similarity=0.055 Sum_probs=229.7
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHh---h-cchHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTA---F-SPNYSTYVVLR 188 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~~r 188 (532)
+.+.+|+|+ +..+.|++.+.+.+++.+++++.|++.|| +|||+++..+.++.+++++++. + .++++.+++.|
T Consensus 37 ~~~~~~~g~---s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (402)
T TIGR00897 37 SPFLKALGL---SPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFY 112 (402)
T ss_pred HHHHHHhCC---CHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHH
Confidence 455688999 99999999999999999999999999999 9999999999999998877653 3 35788899999
Q ss_pred HHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHH-HHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcc
Q 009563 189 MLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGI-ALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 189 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
++.|++.+...+....++.+++|+++|++++++...+.++|. .+++.+++.+. ||+..+|......++..++..++
T Consensus 113 ~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 192 (402)
T TIGR00897 113 GIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFS 192 (402)
T ss_pred HHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999888888788888899999999999999999999997 57888887655 76655554443333333333444
Q ss_pred cccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHH
Q 009563 265 LPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRI 344 (532)
Q Consensus 265 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (532)
.++.++.. .+++. ++.+ +....++.++++|.++.
T Consensus 193 ~~~~~~~~-~~~~~--------------------------------------~~~~-------~~~~~~~~~~~~~~~~~ 226 (402)
T TIGR00897 193 NKDIFTPQ-HMQTR--------------------------------------EKFS-------ELGKAATILFTNPNVLL 226 (402)
T ss_pred cCCCCCcc-cccCC--------------------------------------cchh-------hHHHHHHHHHcChhHHH
Confidence 44432100 00000 0000 00113456778887665
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHH-HHHHHHHHHHHHHH
Q 009563 345 RLFLAVTINFLCSVVYYGISLNVVNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTI-GTLWFSGFFCLLGS 420 (532)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~-~~~~~~~~~~~~~~ 420 (532)
..+..+..........+..+.+..+.+.+. ........++.+++.++.|++.||++||+.+. .+.+...++.+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~ 306 (402)
T TIGR00897 227 GGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALY 306 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 444433333332222233344444443332 22334455778899999999999999887664 33333333333332
Q ss_pred hhhc--cchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHH
Q 009563 421 LVKN--NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPF 493 (532)
Q Consensus 421 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~ 493 (532)
.... ....+ ..++..++.+++.+...+. .....|..| ++|+++.|+.+....+|+.++|.+. ..|+...+
T Consensus 307 ~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~ 383 (402)
T TIGR00897 307 YIPQHFGHSFA-VALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVV 383 (402)
T ss_pred HHHHccCCcHH-HHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH
Confidence 2211 11111 3344555566665554443 445566654 6899999999999999999999877 45667788
Q ss_pred HHHHHHHHHHHHHHhhc
Q 009563 494 AVFAACGIIGGLFAFYL 510 (532)
Q Consensus 494 ~~~~~~~~~~~~~~~~l 510 (532)
++.+++.+++.++..++
T Consensus 384 ~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 384 WIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88888877777666554
No 65
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=9.8e-27 Score=228.68 Aligned_cols=315 Identities=14% Similarity=0.116 Sum_probs=223.4
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.+++|+ |+.+.+++.+++.++..++++++|+++|| +|||+++..+.++..++.+++.++++++.+++.|++.|
T Consensus 32 ~~i~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 107 (394)
T PRK11652 32 ADMARDLNV---REGAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQG 107 (394)
T ss_pred HHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 788999999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
++.+...+....+..|.+++++|+++.++...+..+|..++|.+++.+. +||+.|++.++..++..++..+++||++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 108 LGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred hhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9998888888888899999999999999999999999999999988876 8999999988877766655566777764
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
+.. ++..+ .+..+++.++++.++......
T Consensus 188 ~~~---~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~~~~~ 216 (394)
T PRK11652 188 PAD---ARRTR------------------------------------------------VLASYRTLLSNRRFNCYLLML 216 (394)
T ss_pred ccc---cchhH------------------------------------------------HHHHHHHHHcChHHHHHHHHH
Confidence 210 00000 011345566777655444333
Q ss_pred HHHHHHHHHHHHHhhhcccc-CcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHH-HHHHHHHhhhc
Q 009563 350 VTINFLCSVVYYGISLNVVN-LQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSG-FFCLLGSLVKN 424 (532)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~-~~~~~~~~~~~ 424 (532)
+.............+.+..+ .+.+. ........++.+++.++.+++.||++++........+.. +..........
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (394)
T PRK11652 217 IGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGV 296 (394)
T ss_pred HHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 32222222211112222222 22222 222333445566777777888888773322221221111 11111111111
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 425 NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
...+ .......+.+++.+...+...++..|.+| +.++++.++.+....+|+.+++.+.
T Consensus 297 ~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~ 354 (394)
T PRK11652 297 MNVW--TLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLS 354 (394)
T ss_pred ccHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 34555677778888888999998889887 5679999999999999999999887
No 66
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.96 E-value=8.7e-27 Score=225.75 Aligned_cols=315 Identities=23% Similarity=0.285 Sum_probs=254.2
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.+++|. +..+.+++.+.+.++..+++++.|+++|| +|||+.+..+.++..++.++..+.++++.+++.|++.|
T Consensus 23 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~d~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 98 (352)
T cd06174 23 PLLAEDLGL---SASQAGLIVSAFSLGYALGSLLAGYLSDR-FGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLG 98 (352)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 777888899 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
++.+...+...+++.|++|+++|++.+++......+|..+++.+++.+. +||+.+++.+++.++..+.. .+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 174 (352)
T cd06174 99 LGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL-LFLL--- 174 (352)
T ss_pred cccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHH---
Confidence 9999999999999999999999999999999999999999999998887 79999999888877766333 2222
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
|..+...+..
T Consensus 175 ----------------------------------------------------------------------~~~~~~~~~~ 184 (352)
T cd06174 175 ----------------------------------------------------------------------RLLLLLALAF 184 (352)
T ss_pred ----------------------------------------------------------------------HHHHHHHHHH
Confidence 1122222222
Q ss_pred HHHHHHHHHHHHHhhhccccC----cchHHHHHHHHHHHHHHHHHHHHHHHhhhCCch-hHHHHHHHHHHHHHHHHhhhc
Q 009563 350 VTINFLCSVVYYGISLNVVNL----QTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKP-MTIGTLWFSGFFCLLGSLVKN 424 (532)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~-~~~~~~~~~~~~~~~~~~~~~ 424 (532)
+.............+.+..+. ............++.+++.++.+++.||++||+ .+..+..+..++.+.+....+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 264 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS 264 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 233333222222233322221 223344556667788899999999999999999 888888888888877776544
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHH
Q 009563 425 NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAAC 499 (532)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~ 499 (532)
. + ...+..++.+++.+...+...++..|..|+++|++..|+.+....+|..++|.+. ..++...+++.+++
T Consensus 265 ~--~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~ 340 (352)
T cd06174 265 L--A--LLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAAL 340 (352)
T ss_pred H--H--HHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHH
Confidence 2 1 5667778888888899999999999999999999999999999999999999887 23567778888888
Q ss_pred HHHHHHHHhh
Q 009563 500 GIIGGLFAFY 509 (532)
Q Consensus 500 ~~~~~~~~~~ 509 (532)
.+++.+...+
T Consensus 341 ~~i~~i~~~~ 350 (352)
T cd06174 341 ALLAALLLLL 350 (352)
T ss_pred HHHHHHHhee
Confidence 7777666544
No 67
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=7.1e-27 Score=228.55 Aligned_cols=335 Identities=12% Similarity=0.053 Sum_probs=237.9
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
+.+.+++|+ +..++|++.+.+.++..+++++.|+++|| +|||+++.++.++.+++.++.+++++++.+++.|++.|
T Consensus 32 ~~l~~~~g~---s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 107 (395)
T PRK10054 32 IYLSRQYSL---SVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALIN 107 (395)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 456788999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHhcccccCch
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--TWRALYIASSIPSILFLLIILPFLPESPR 270 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--~wr~~f~~~~~~~~~~~~~~~~~~~esp~ 270 (532)
.+.+...+...++..|..|+++|+++.++.....++|.+++|.+++.+. +|+..|++.++..++..++..+++||+++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~ 187 (395)
T PRK10054 108 CAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSEK 187 (395)
T ss_pred HHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 8888888888999999999999999999999999999999999999876 99999998888777765455555665421
Q ss_pred hHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHH
Q 009563 271 WYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAV 350 (532)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (532)
. ++.++ . ...+.++.++++.++...+..+
T Consensus 188 ~----~~~~~-~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 216 (395)
T PRK10054 188 A----IATET-G----------------------------------------------SVWSPSVLLQDKALLWFTCSGF 216 (395)
T ss_pred c----cccch-h----------------------------------------------hhhhhhhhccCceehHHHHHHH
Confidence 0 00000 0 0001245567776655544444
Q ss_pred HHHHHHHHHHHHhhhcc---ccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhc
Q 009563 351 TINFLCSVVYYGISLNV---VNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKN 424 (532)
Q Consensus 351 ~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~ 424 (532)
+..+.........+.+. .+.+.+. .......++..+......+++.||.++|+.+..+..+..++...+.+..+
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (395)
T PRK10054 217 LASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGN 296 (395)
T ss_pred HHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcch
Confidence 33333221111111111 1222212 12222333344455677889999999999888888777777665554322
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHH
Q 009563 425 NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAAC 499 (532)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~ 499 (532)
+.+ ...+..++.+++.....|.....+.+..|++.++++.+..+ ...+|..+||.+. ..++...|++.+.+
T Consensus 297 -~~~--~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~ 372 (395)
T PRK10054 297 -SLL--LWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALA 372 (395)
T ss_pred -HHH--HHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHH
Confidence 211 33455667777777777888889999999999999988765 5668888998877 33455555555544
Q ss_pred HHHHHHH
Q 009563 500 GIIGGLF 506 (532)
Q Consensus 500 ~~~~~~~ 506 (532)
..++.++
T Consensus 373 ~~~~~~~ 379 (395)
T PRK10054 373 IVAAWLL 379 (395)
T ss_pred HHHHHHH
Confidence 4444333
No 68
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.96 E-value=2.1e-26 Score=225.59 Aligned_cols=313 Identities=13% Similarity=0.039 Sum_probs=225.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
+.+++++|+ |..++|++.+.+.++..+.+++.|+++|| +|||+++..+.++.+++.+++.++++++.+++.|+++|
T Consensus 35 ~~~~~~~g~---s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 110 (400)
T PRK11646 35 IRFVDQLGW---AAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSG 110 (400)
T ss_pred HHHHHHhCC---cHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 356788999 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHhcccccCch
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--TWRALYIASSIPSILFLLIILPFLPESPR 270 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--~wr~~f~~~~~~~~~~~~~~~~~~~esp~ 270 (532)
++.+...+...+++.|++|+++|+++.++......+|..+||.+++.+. +||+.|++.++..++..++..+++||.+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 190 (400)
T PRK11646 111 LGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPAYKL 190 (400)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 9999888989999999999999999999999999999999999998887 99999999888777665454555554210
Q ss_pred hHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHH
Q 009563 271 WYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAV 350 (532)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (532)
+.+.+ +.+.+++++++++.++.......
T Consensus 191 ----~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 218 (400)
T PRK11646 191 ----STVRT------------------------------------------------PVREGMTRVLRDKRFVTYVLTLT 218 (400)
T ss_pred ----cccch------------------------------------------------hhHHHHHHHHcCchHHHHHHHHH
Confidence 00000 00013445667766543333222
Q ss_pred HHHHHHHHHHHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHH-hhhCCchhHHHHHHHHHHHHHHHHhhhccc
Q 009563 351 TINFLCSVVYYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLL-DKLGRKPMTIGTLWFSGFFCLLGSLVKNNG 426 (532)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~-d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (532)
.............+.+.++...+ ........++....+....+++. ||++.++.+..+..+.+++.+++...++.
T Consensus 219 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~- 297 (400)
T PRK11646 219 GYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNL- 297 (400)
T ss_pred HHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhH-
Confidence 22222211222334444332222 22222223333333334445555 45665666666666666666655544332
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 427 IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+ ...+...+.+.+.+...|...+++.+..|++.|+++.|+.+....+|..++|.+.
T Consensus 298 -~--~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~ 353 (400)
T PRK11646 298 -Q--QLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGG 353 (400)
T ss_pred -H--HHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccch
Confidence 1 3334445566677777788889999999999999999999999999999998777
No 69
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.96 E-value=3e-26 Score=229.66 Aligned_cols=346 Identities=13% Similarity=0.079 Sum_probs=232.4
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC-----CchHH-HHHHHHHHHHHHHHHhhc---chHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRL-----GRKGS-LTVVCMMNAVFGCLTAFS---PNYST 183 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~ 183 (532)
|...++.|. +..++|.+ +.....+ ++.+++|+++|| + |||+. +..+.++.+++.++.++. ++++.
T Consensus 36 ~~~l~~~g~---~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr-~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~ 109 (491)
T PRK11010 36 QAWMTVENI---DLKTIGFF-SLVGQAY-VFKFLWSPLMDR-YTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRW 109 (491)
T ss_pred HHHHHhCCC---CHHHHHHH-HHHHHHH-HHHHHHHHHHHc-ccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHH
Confidence 667777888 88899986 4444444 689999999999 9 99985 667777777777777765 47889
Q ss_pred HHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHH
Q 009563 184 YVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLL 259 (532)
Q Consensus 184 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~ 259 (532)
+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+. |||..|++.++..++..
T Consensus 110 l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~- 188 (491)
T PRK11010 110 LAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCI- 188 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999998877764 89999999988877765
Q ss_pred HHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcC
Q 009563 260 IILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKS 339 (532)
Q Consensus 260 ~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (532)
+..+++||+++.. ++.++.. +....++++.+++
T Consensus 189 l~~~~~~e~~~~~---~~~~~~~--------------------------------------------~~~~~~l~~~~~~ 221 (491)
T PRK11010 189 IATLLAPEPTDTI---PVPKTLE--------------------------------------------QAVVAPLRDFFGR 221 (491)
T ss_pred HHHHhcCCCcccc---ccccchh--------------------------------------------hhHHHHHHHHHcC
Confidence 4444578764210 0000000 0001134456666
Q ss_pred hHHHHHHHHHHHHHHHHHHHH-HHhhhccccCcchHH---HHH-HHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHH
Q 009563 340 PLTRIRLFLAVTINFLCSVVY-YGISLNVVNLQTNLY---LNV-LVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGF 414 (532)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~ 414 (532)
+..+......+.........+ +..++.....+.+.. ... ....++.+++.+++|++.||+++|+.+.++..+.++
T Consensus 222 ~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l 301 (491)
T PRK11010 222 NNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGV 301 (491)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 555444333333333322222 223332233333222 222 233457789999999999999998877766655554
Q ss_pred HHHHHHhh-hccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh
Q 009563 415 FCLLGSLV-KNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLG 488 (532)
Q Consensus 415 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~ 488 (532)
..+.+... ......+ ...+..++..+..+...+...++..+..+++.+++..|+.+....+|..+++.+. ..|
T Consensus 302 ~~l~~~~l~~~~~~~~-~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G 380 (491)
T PRK11010 302 SNAGYWLLSITDKNLY-SMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG 380 (491)
T ss_pred HHHHHHHHHhccccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44333221 1111111 2233344444444555566678888888888889999999998888877665554 456
Q ss_pred hhhHHHHHHHHHHHHHHHHhhccCC
Q 009563 489 GWLPFAVFAACGIIGGLFAFYLPET 513 (532)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (532)
+...|.+.+++.+++.+....++++
T Consensus 381 ~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 381 WPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7777888888888877776666543
No 70
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.96 E-value=4.1e-26 Score=223.46 Aligned_cols=311 Identities=14% Similarity=0.058 Sum_probs=229.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh---cchHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF---SPNYSTYVVLRM 189 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~ 189 (532)
|.+++++|+ +..+.|++.+.+++++.+++++.|++.|| +|||+++.++.++++++.+++.. .++++.+++.|+
T Consensus 27 ~~~~~~~~~---s~~~~g~l~s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~ 102 (410)
T TIGR00885 27 PQFQQAFTL---TAFQAALVQSAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLF 102 (410)
T ss_pred HHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 899999999 99999999999999999999999999999 99999999999999999988654 468999999999
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----------------------------
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---------------------------- 241 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---------------------------- 241 (532)
+.|+|.|...+....++.+..|+++|++.+++.+...++|..+++.++..+.
T Consensus 103 l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (410)
T TIGR00885 103 ILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDL 182 (410)
T ss_pred HHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998877652
Q ss_pred -chHHHHHHHHHHHHHHHHHHhc-ccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccch
Q 009563 242 -TWRALYIASSIPSILFLLIILP-FLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNY 319 (532)
Q Consensus 242 -~wr~~f~~~~~~~~~~~~~~~~-~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
+||++|++.+++.++..++..+ ..||.++ ++ ++
T Consensus 183 ~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~~-~~--------------------------------------- 217 (410)
T TIGR00885 183 ASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----SD-AK--------------------------------------- 217 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cc-cc---------------------------------------
Confidence 4999999988877765533321 1332110 00 00
Q ss_pred hhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhccccC--cchH---HHHHHHHHHHHHHHHHHHHH
Q 009563 320 KEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVVNL--QTNL---YLNVLVNAVAEMPAFTITAV 394 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~ 394 (532)
+.......++++|+|.++...+..+++..........++.+.... +.+. ............+|++++++
T Consensus 218 ------~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~ 291 (410)
T TIGR00885 218 ------QISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTW 291 (410)
T ss_pred ------cccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000001234566777766655544444333322222233332221 1111 11122223456789999999
Q ss_pred HHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHH
Q 009563 395 LLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAA 474 (532)
Q Consensus 395 l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 474 (532)
+.||+++|+++.+...+..+.+++.....+. .......+.+++.+..+|..++...+..+++.+..+.++....
T Consensus 292 l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~-----~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~- 365 (410)
T TIGR00885 292 LISYLAAHKVLMAYAIIGMALCLGSIFAGGH-----VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI- 365 (410)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-----HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH-
Confidence 9999999999888888888877777664432 2356666777888899999999999999887765555555544
Q ss_pred HHHHHHHHHHH
Q 009563 475 QLGAILAPFVV 485 (532)
Q Consensus 475 ~~g~~i~p~~~ 485 (532)
+|+.+.|.+.
T Consensus 366 -~Gga~~p~l~ 375 (410)
T TIGR00885 366 -IGGGIVPPLQ 375 (410)
T ss_pred -hccchHHHHH
Confidence 8888898887
No 71
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=1.1e-26 Score=228.85 Aligned_cols=310 Identities=21% Similarity=0.276 Sum_probs=206.4
Q ss_pred hhhHHHHHHHH-----HHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHH--------HHHHHHHHH
Q 009563 125 EKYKVGLVQAL-----FFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYS--------TYVVLRMLT 191 (532)
Q Consensus 125 s~~~~~~~~s~-----~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~ 191 (532)
++.+.+.+.+. .+++..+++++.|+++|| +|||+++..+.++..++.++++++++++ .+++.|+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 28 GDPLVALLATFATFAAGFLARPLGAIVFGHFGDR-IGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh-hhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 44555554433 334445789999999999 9999999999999999999999999875 488999999
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh---------h--chHHHHHHHHHHHHHHHHH
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF---------Q--TWRALYIASSIPSILFLLI 260 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l---------~--~wr~~f~~~~~~~~~~~~~ 260 (532)
|++.+...+....++.|++++++|++..++...+..+|.++++.++..+ . +||+.|++.+++.++.. +
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~-~ 185 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL-Y 185 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999999999999999999999999998876543 1 89999998777665544 4
Q ss_pred HhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcCh
Q 009563 261 ILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSP 340 (532)
Q Consensus 261 ~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (532)
....+||+|++...++ + .+..+.+.++.++++
T Consensus 186 ~~~~~~~~~~~~~~~~----------------~--------------------------------~~~~~~~~~~~~~~~ 217 (394)
T TIGR00883 186 LRRNLEETPVFEKAQE----------------K--------------------------------HKKKRGPIRETLTKH 217 (394)
T ss_pred HHHhcCCChhHHHHHh----------------c--------------------------------cccccCCHHHHHHhc
Confidence 4455666543110000 0 000011334444444
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHhhhcc-ccCc---chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHH
Q 009563 341 L--TRIRLFLAVTINFLCSVVYYGISLNV-VNLQ---TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGF 414 (532)
Q Consensus 341 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~ 414 (532)
. ++......+.............+.+. ...+ ...........+..+++.++.+++.||+|||+.+.....+..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 218 RKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAAL 297 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 3 22222222222222222222223332 2222 2233334455667788899999999999999987755544443
Q ss_pred HH-HHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHH-HHHHHHHHHHHHHH
Q 009563 415 FC-LLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCAT-QAAQLGAILAPFVV 485 (532)
Q Consensus 415 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~~~~g~~i~p~~~ 485 (532)
.. ..+.........+ .......+.+++.+...+...+++.|.+|++.|+++.++.+ ....+|..++|.+.
T Consensus 298 ~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~ 369 (394)
T TIGR00883 298 LAVPLLMALLDSGSFT-LFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA 369 (394)
T ss_pred HHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH
Confidence 33 2222221111111 34455566677777888889999999999999999999854 44557777888777
No 72
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=4.5e-27 Score=229.07 Aligned_cols=320 Identities=14% Similarity=0.076 Sum_probs=215.6
Q ss_pred Cc-eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHH
Q 009563 113 SS-TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP-NYSTYVVLRML 190 (532)
Q Consensus 113 ~~-i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l 190 (532)
|. +++++|+ |..+.+++.+++.+++.+++++.|+++|| +|||+.+.++.++..++.+++++++ +++.+++.|++
T Consensus 25 ~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 100 (366)
T TIGR00886 25 VQMIKDDLGL---STAQLGNLVAVPVLAGAVLRIILGFLVDK-FGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLF 100 (366)
T ss_pred hHHHHHHhCC---CHHHhhHhhHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 74 8899999 99999999999999999999999999999 9999999999999999999999999 99999999999
Q ss_pred HHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-------------chHHHH-HHHHHHHHH
Q 009563 191 TGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ-------------TWRALY-IASSIPSIL 256 (532)
Q Consensus 191 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-------------~wr~~f-~~~~~~~~~ 256 (532)
+|++.+. .+....++.|++|+++|+++.++...+.++|..+++.+++.+. +||+.| +..+++..+
T Consensus 101 ~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 179 (366)
T TIGR00886 101 IGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLL 179 (366)
T ss_pred HHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHH
Confidence 9998654 5667889999999999999999998777777766666554332 699999 444555555
Q ss_pred HHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhh
Q 009563 257 FLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDV 336 (532)
Q Consensus 257 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (532)
..++.+.+.+|.|+.. + ++.+. +.+ .+. . ..++ ......++.
T Consensus 180 ~~~~~~~~~~~~~~~~----~-~~~~~--------~~~---~~~-------~-----~~~~----------~~~~~~~~~ 221 (366)
T TIGR00886 180 PALLIFFVGADTPPGK----P-ATGKL--------SFK---GAR-------W-----SVGT----------GALGDQLKV 221 (366)
T ss_pred HHHHHHHhcccCCccc----c-cchhc--------ccc---ccc-------c-----cccc----------hhHHHHHHH
Confidence 5545556667765310 0 00000 000 000 0 0000 000133456
Q ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHhhhccc-cCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHH
Q 009563 337 IKSPLTRIRLFLAVTINFLCSVVYYGISLNVV-NLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFS 412 (532)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~ 412 (532)
++++..+...+................+.+.. ..+. ..........+..+++.++.+++.||+++|+.+..+....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~ 301 (366)
T TIGR00886 222 FRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGV 301 (366)
T ss_pred HhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHH
Confidence 66666554444333332222222222222322 2222 2233344455667788999999999999998877776666
Q ss_pred HHHHHHHHhhhccc-hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHH
Q 009563 413 GFFCLLGSLVKNNG-IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLG 477 (532)
Q Consensus 413 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g 477 (532)
..+..++.+..... ..+ ..++...+..+..+...+..+..+.+..| +++|++.|+.+..+++|
T Consensus 302 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 302 AMGAFLVVLGLVSPLSLA-VFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHhcCCCcchHH-HHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 66555554433321 111 33444455556666666777888888887 58899999999888765
No 73
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.95 E-value=2.5e-25 Score=218.83 Aligned_cols=345 Identities=10% Similarity=0.014 Sum_probs=230.7
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-hHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGR-KGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLT 191 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 191 (532)
+.+.+++|+ +..|+|++.+++.++..++++++|.++|| +|| |+++.++.++..++..+..+.++++.+++.|++.
T Consensus 27 ~~l~~~~g~---s~~~iGl~~a~~~~~~~i~~~~~g~l~dr-~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (418)
T TIGR00889 27 SYMSKTLHF---SGAEIGWVYSSTGIAAILMPILVGIIADK-WLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLAN 102 (418)
T ss_pred HHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 567788999 99999999999999999999999999999 865 7888989999989998999999999999999999
Q ss_pred Hhhccccchhhhhee----e----cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHH
Q 009563 192 GFSTGGVGLCAFVLA----T----EPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLI 260 (532)
Q Consensus 192 G~~~~~~~~~~~~~i----~----~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~ 260 (532)
|++.+...+...+.. . |......|.+..+ .+|.++++.+++.+. .|+ +|++.++..++.. +
T Consensus 103 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~-~ 174 (418)
T TIGR00889 103 SLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLG-V 174 (418)
T ss_pred HHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHH-H
Confidence 998777766554432 1 2232233444444 367777777777664 344 4556666666655 4
Q ss_pred HhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcCh
Q 009563 261 ILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSP 340 (532)
Q Consensus 261 ~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (532)
..+++||+|+. +++.+.. .++..+.+.++++|+|
T Consensus 175 ~~~~~~e~~~~---~~~~~~~-------------------------------------------~~~~~~~~~~~~~k~~ 208 (418)
T TIGR00889 175 FALTLPDIPVA---KSTAKMS-------------------------------------------IKVMLGLDAFILFKNK 208 (418)
T ss_pred HHhcCCCCCCC---ccccccC-------------------------------------------HHHHhhhhHHHHhcCC
Confidence 45677887531 0000000 0000011234566777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCc-----------chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHH
Q 009563 341 LTRIRLFLAVTINFLCSVVYYGISLNVVNLQ-----------TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTL 409 (532)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~ 409 (532)
.++..++..++........+...+.+..+.+ ...........+..+++.+..+++.||+|+|+++..+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~ 288 (418)
T TIGR00889 209 RMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSL 288 (418)
T ss_pred CeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 6555444444443333222222222222221 12234445555677788899999999999999999999
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHH-HHHHHHHHHHHHHH---
Q 009563 410 WFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCAT-QAAQLGAILAPFVV--- 485 (532)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~~~~g~~i~p~~~--- 485 (532)
++..+...++.............++..++.+++.+...+....++.|.+|++.|+++.|+.+ ....+|.+++|.+.
T Consensus 289 ~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l 368 (418)
T TIGR00889 289 VAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVM 368 (418)
T ss_pred HHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 88888776665532222111134556677777777777888899999999999999999997 56778888888887
Q ss_pred --H------hhhhhHHHHHHHHHHHHHHHH-hhccCCCC
Q 009563 486 --V------LGGWLPFAVFAACGIIGGLFA-FYLPETLN 515 (532)
Q Consensus 486 --~------~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~ 515 (532)
. .++...|.+.+++.+++.++. ++++|+++
T Consensus 369 ~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 369 VEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 2 235567777777766665554 55666544
No 74
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=1.2e-24 Score=213.27 Aligned_cols=336 Identities=14% Similarity=0.117 Sum_probs=214.9
Q ss_pred CceeecccccchhhhHHHHHHHHHHH-HHHHHHHHHHhhccCCCCchHHH-HHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFF-GCMIGAGVFGHLSDSRLGRKGSL-TVVCMMNAVFGCLTAFSPNYSTYVVLRML 190 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l-~~~~~~~~~g~l~dr~~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 190 (532)
+.+.+++|+ +..++|++.+...+ +..++.++.++ +|| +|||+.+ ..+.++.+++..+.+++++++.+++.+.+
T Consensus 40 ~~l~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 114 (393)
T PRK15011 40 IFLTDEVHA---RPAMVGFFFTGSAVIGILVSQFLAGR-SDK-RGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVF 114 (393)
T ss_pred HHHHhhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-ccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 456789999 99999999876655 66666666666 999 9999875 45566667788888899999988766655
Q ss_pred HHhhccccchhhhheeecccCCCch--hHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhccc
Q 009563 191 TGFSTGGVGLCAFVLATEPVGPSKR--GAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFL 265 (532)
Q Consensus 191 ~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~ 265 (532)
.|...+...+....++.|+.++++| +...++.+.+.++|.+++|++++.+. |||..|++.++..++..++.++++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 194 (393)
T PRK15011 115 LSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFL 194 (393)
T ss_pred HHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhc
Confidence 5554556778888888888776655 34557888899999999999999886 999999999988887776667778
Q ss_pred ccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcC-hHHHH
Q 009563 266 PESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKS-PLTRI 344 (532)
Q Consensus 266 ~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 344 (532)
||.++. +++ ++ + ..+ ..+ ++ +..+.
T Consensus 195 ~~~~~~---~~~-~~-----------------~----------------~~~--------------~~~---~~~~~~~~ 220 (393)
T PRK15011 195 PSMRKE---LPL-AT-----------------G----------------TLE--------------APR---RNRRDTLL 220 (393)
T ss_pred CccCCC---Ccc-cc-----------------c----------------ccc--------------ccc---cccccHHH
Confidence 876421 000 00 0 000 000 01 11111
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-ccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHH
Q 009563 345 RLFLAVTINFLCSVVYYGISLNV-VNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGS 420 (532)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~ 420 (532)
.+......+..........+.+. +..+.+. ........+..+++.++.|+++||++||+.+..+.....+....+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~ 300 (393)
T PRK15011 221 LFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGML 300 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 12222222222222222233332 2222222 2222333455667889999999999999887766555544443332
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHH
Q 009563 421 LVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAV 495 (532)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~ 495 (532)
... ..+ ..++..++.++..+...+....+..|.+|+ .++++.++.+...++|..++|.+. ..++...+.+
T Consensus 301 ~~~--~~~--~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~ 375 (393)
T PRK15011 301 MAH--SPA--ILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWF 375 (393)
T ss_pred HHh--hHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 222 121 233344444445555555666777888886 489999999888889988888777 3456667777
Q ss_pred HHHHHHHHHHHHhhccC
Q 009563 496 FAACGIIGGLFAFYLPE 512 (532)
Q Consensus 496 ~~~~~~~~~~~~~~l~~ 512 (532)
.+++.+++.+..+.+||
T Consensus 376 ~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 376 ALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 77777776666666654
No 75
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.95 E-value=4.9e-25 Score=213.39 Aligned_cols=312 Identities=13% Similarity=0.076 Sum_probs=222.0
Q ss_pred CCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH
Q 009563 110 GDGSSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRM 189 (532)
Q Consensus 110 ~~~~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 189 (532)
|.+|.+.+++|+ +..+.|++.+.+.+++.+++++.|+++|| +|||+++.++.++..++.+++ .+++++.+++.|+
T Consensus 21 ~~lp~l~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 21 PLLPQIRSALGM---SFSVAGLLTALPVLCFAVLAPLAPWLARR-FGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccHHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 345899999999 99999999999999999999999999999 999999999999988888877 7789999999999
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHHHhcc
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ-----TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-----~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
+.|++.+...+....++.|+++ ++|+++.++...+.++|..+++.+++.+. +||+.|.+.++..++.. ..+
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~---~~~ 171 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL---LAW 171 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH---HHH
Confidence 9999999888888888889886 68999999999999999999988877664 39999887766544332 223
Q ss_pred cccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHH
Q 009563 265 LPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRI 344 (532)
Q Consensus 265 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (532)
+|+.++. ++ ++ . ...+...++.+|++..+.
T Consensus 172 ~~~~~~~----~~-------------------~~----------------~-----------~~~~~~~~~~~~~~~~~~ 201 (355)
T TIGR00896 172 IPQVRRR----VA-------------------AN----------------Q-----------TTTRLTPVRIWRSPLAWQ 201 (355)
T ss_pred hhhhccc----cC-------------------CC----------------C-----------CCCCCCCchhhcCHhHHH
Confidence 3443210 00 00 0 000012345667776654
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhh-CCchhHHHHHHHHHHHHHHHH
Q 009563 345 RLFLAVTINFLCSVVYYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKL-GRKPMTIGTLWFSGFFCLLGS 420 (532)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~-gr~~~~~~~~~~~~~~~~~~~ 420 (532)
..+...+............+.+..+.+.+ .........++.+++.++.+++.||+ +||+.+..+..+.+++.+.+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
T TIGR00896 202 VTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLL 281 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Confidence 43333332232222222234333333332 23344556678889999999999999 566666677777776666555
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccc-cchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 421 LVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELF-PTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+...... . ...++.+++.+..++...+.+.+.. +++.++...++.+....++..++|.+.
T Consensus 282 ~~~~~~~----~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~ 342 (355)
T TIGR00896 282 FAPMHGL----W-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFV 342 (355)
T ss_pred HhhhhHH----H-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443221 1 2345677888888887766665544 456778999999988899988998776
No 76
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=1.1e-24 Score=212.69 Aligned_cols=331 Identities=11% Similarity=-0.027 Sum_probs=236.0
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHH----HHHHHHHHHHHHHHhhcchHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSL----TVVCMMNAVFGCLTAFSPNYSTYVVLR 188 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~r 188 (532)
|.+.+++|+ |..++|++.+++.++..++++++|+++|| +|||... ..+..+..+ ..+..+++++.+++.|
T Consensus 28 ~~~l~~~g~---s~~~ig~~~s~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~ 101 (382)
T TIGR00902 28 PAWLKGIGL---GEEMIGLLIGAALIARFAGGLFFAPLIKD-ANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAI 101 (382)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHH
Confidence 788899999 99999999999999999999999999999 8985433 233222222 2445678999999999
Q ss_pred HHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhccc
Q 009563 189 MLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFL 265 (532)
Q Consensus 189 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~ 265 (532)
+++|.+.+...|...++..++ +++|++..+....+.++|.++++.+++.+. |||..|++.++..++.. +. +.+
T Consensus 102 ~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~-~~~ 177 (382)
T TIGR00902 102 GLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IG-FLI 177 (382)
T ss_pred HHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HH-HHc
Confidence 999999988888888887664 477899999999999999999999988887 99999988765533322 22 233
Q ss_pred ccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHH
Q 009563 266 PESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIR 345 (532)
Q Consensus 266 ~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (532)
+|+++. +++ ++ + ++.....+.++++|+|.++..
T Consensus 178 ~~~~~~---~~~-~~---------------------------------~----------~~~~~~~~~~~~l~~~~~~~~ 210 (382)
T TIGR00902 178 KPTIPP---KDA-IP---------------------------------E----------DESQGDSAFIALLKNPMNLRF 210 (382)
T ss_pred CCCCCC---Ccc-cc---------------------------------c----------cccccchhHHHHHcChHHHHH
Confidence 333210 000 00 0 000011245678899887776
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhh
Q 009563 346 LFLAVTINFLCSVVYYGISLNVVNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLV 422 (532)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~ 422 (532)
.+..++........+...+.+.++.+.+. ........+..+++.++.+++.||+++|+.+.++.+...+....+.+.
T Consensus 211 l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 211 LAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 66666555554444444444444444433 233344556677888899999999999999999999998888877664
Q ss_pred hccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHH-HHHHHHHHHHHHH-----HhhhhhHHHHH
Q 009563 423 KNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQ-AAQLGAILAPFVV-----VLGGWLPFAVF 496 (532)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~-~~~~g~~i~p~~~-----~~~~~~~~~~~ 496 (532)
++.. ..+....+.++..+...+....++.+. |++.++++.++++. ...+|..++|.+. ..+ ...|.+.
T Consensus 291 ~~~~----~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~~~~~~~ 364 (382)
T TIGR00902 291 EAFP----LIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-AGTFVFM 364 (382)
T ss_pred hhHH----HHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHH
Confidence 4332 456678888999999999999999988 99999999999874 4567777787777 233 3456666
Q ss_pred HHHHHHHHHH
Q 009563 497 AACGIIGGLF 506 (532)
Q Consensus 497 ~~~~~~~~~~ 506 (532)
+++.+++.++
T Consensus 365 ~~~~~~~~~~ 374 (382)
T TIGR00902 365 AIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHH
Confidence 6666655433
No 77
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=5.8e-26 Score=224.04 Aligned_cols=414 Identities=14% Similarity=0.127 Sum_probs=286.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhh
Q 009563 48 EFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKY 127 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~ 127 (532)
|.+.|-|.+.+..++..+...-.....+.. . +.++++|+. +..
T Consensus 39 PdGG~gWvV~~a~fl~~~~~~g~~~~~Gv~--------~--------------------------~~~~~~f~~---s~~ 81 (509)
T KOG2504|consen 39 PDGGWGWVVVFASFLVNLSTDGLINSFGLL--------F--------------------------EELMDYFGS---SSS 81 (509)
T ss_pred CCCCeeeeeeHhHHHHHHhhhcchheehhh--------H--------------------------HHHHHHhCC---Ccc
Confidence 467788888887777665444433444433 2 789999999 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHHHHhhccccchhhhhee
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVL-RMLTGFSTGGVGLCAFVLA 206 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l~G~~~~~~~~~~~~~i 206 (532)
+++|+.++......+..++.+.+.|| ||.|.+.++|.++.+++.++.+|+++++++++. -++.|+|.|..+..+..++
T Consensus 82 ~~~~i~sl~~~~~~~~gpl~s~l~~r-fg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv 160 (509)
T KOG2504|consen 82 QIAWIGSLLLGVYLLAGPLVSALCNR-FGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVIL 160 (509)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHhh-cCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhh
Confidence 99999999999999999999999999 999999999999999999999999999887665 6888999999999999999
Q ss_pred ecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHH
Q 009563 207 TEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMK 283 (532)
Q Consensus 207 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~ 283 (532)
..|+ +|+|+.+.|+...+.++|..+-|.+...+. |||+.+++.+.+.+-..+.....-|.++..... .++..
T Consensus 161 ~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~---~~~~~- 235 (509)
T KOG2504|consen 161 GTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN---EEKDL- 235 (509)
T ss_pred hhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch---hhhhh-
Confidence 9877 588999999999999999998888877776 999999999988877775555555544431111 11100
Q ss_pred HHHHHHHHhCCCCCccccccchhhhhhhhh---cCccchhhhhhhhh--ccccc----hhhhhcChHHHHHHHHHHHHHH
Q 009563 284 IMRAIAKSNGRHLPDGVVLMLDDEQENDAS---NGKQNYKEELATKE--AVTGS----VIDVIKSPLTRIRLFLAVTINF 354 (532)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 354 (532)
+.. ....+..+........+....... ......+...+..+ ..+.. -.++++++.++...+...+..+
T Consensus 236 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~ 312 (509)
T KOG2504|consen 236 --RNS-AASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYL 312 (509)
T ss_pred --ccc-cccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHH
Confidence 000 000000000000000000000000 00000000000000 11111 2578888876665555555555
Q ss_pred HHHHHHHHhhhccccCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCc--hhHHHHHHHHHHHHHHHHhhhccchhH
Q 009563 355 LCSVVYYGISLNVVNLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRK--PMTIGTLWFSGFFCLLGSLVKNNGIWK 429 (532)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (532)
.....++.++.+....+. +........++..+++.++.|++.|+...+ .+..++.++.+++.+...+..+..
T Consensus 313 g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~--- 389 (509)
T KOG2504|consen 313 GFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYV--- 389 (509)
T ss_pred HHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHH---
Confidence 555555555555444433 344555667788899999999999998744 344455555555554444443332
Q ss_pred HHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh-hhhHHHHHHHHHHHH
Q 009563 430 IVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLG-GWLPFAVFAACGIIG 503 (532)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~-~~~~~~~~~~~~~~~ 503 (532)
.++...+++++..+.........+.|+.+.+.-..+.|+...+..++..+||.+. ..+ +...|+..+++.+++
T Consensus 390 -~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s 468 (509)
T KOG2504|consen 390 -GLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLS 468 (509)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHH
Confidence 5677778888888888888888999999999999999999999999999999888 334 778889999888888
Q ss_pred HHHHhhcc
Q 009563 504 GLFAFYLP 511 (532)
Q Consensus 504 ~~~~~~l~ 511 (532)
..+.+..+
T Consensus 469 ~~~~~~~~ 476 (509)
T KOG2504|consen 469 AVLLLILR 476 (509)
T ss_pred HHHHHHhH
Confidence 87776665
No 78
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.94 E-value=8.7e-24 Score=207.98 Aligned_cols=345 Identities=15% Similarity=0.092 Sum_probs=228.9
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC-----CchH-HHHHHHHHHHHHHHHHhhc---chHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRL-----GRKG-SLTVVCMMNAVFGCLTAFS---PNYST 183 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~-----Grr~-~l~~~~~~~~~~~~~~~~~---~~~~~ 183 (532)
|..-++.|+ |.+++|++..+... .+..+++|+++|| + |||| .+.++.++.+++..+.++. ++++.
T Consensus 23 ~~~l~~~g~---~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~ 96 (402)
T PRK11902 23 QAWMTVEGL---DIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWP 96 (402)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHH
Confidence 667778899 99999999777776 5899999999999 8 8875 7888888888888877776 35777
Q ss_pred HHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHH
Q 009563 184 YVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLL 259 (532)
Q Consensus 184 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~ 259 (532)
+++..++.++..+...+...+++.|+.|+++|+++.++...+..+|.++++.++..+. |||..|++.++..++..
T Consensus 97 l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~- 175 (402)
T PRK11902 97 LAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGA- 175 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHH-
Confidence 8888888898889999999999999999999999999999999999999988877764 89999999888877655
Q ss_pred HHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcC
Q 009563 260 IILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKS 339 (532)
Q Consensus 260 ~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (532)
+..+++||+++.. ++.++.. ++....+++++++
T Consensus 176 l~~~~~~e~~~~~---~~~~~~~--------------------------------------------~~~~~~~~~l~~~ 208 (402)
T PRK11902 176 LTTLWAPEPEVPA---RPPRSLG--------------------------------------------EAVVGPLRDFFSR 208 (402)
T ss_pred HHHHhcCCCcccc---cccchhH--------------------------------------------HHHHHHHHHHHhC
Confidence 4455667754310 0000000 0011245677888
Q ss_pred hHHHHHHHHHHHHHHHHHHH-HHHhhhccccCcchHHHHHH---HH-HHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHH
Q 009563 340 PLTRIRLFLAVTINFLCSVV-YYGISLNVVNLQTNLYLNVL---VN-AVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGF 414 (532)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~ 414 (532)
|.++..+...++........ .+..++.....+.+...... .. .++.+++.++++++.||+++|+.+..+..+..+
T Consensus 209 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l 288 (402)
T PRK11902 209 RGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAV 288 (402)
T ss_pred cCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 87665554444443332221 12222333333333322222 22 234678899999999999999888776666555
Q ss_pred HHHHHHhh-h-ccchhHHHHHHHH----HHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-Hh
Q 009563 415 FCLLGSLV-K-NNGIWKIVRMICG----VMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-VL 487 (532)
Q Consensus 415 ~~~~~~~~-~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-~~ 487 (532)
..+.+... . ..+.+ ...+.. +..+++.+..++....++.+.+|.+.++...++.......++.++..+. ..
T Consensus 289 ~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~ 366 (402)
T PRK11902 289 SNLGYWVLAVTPKHLW--TMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAY 366 (402)
T ss_pred HHHHHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 54433221 1 12221 222222 3455666667778888889888877665433333222222333343333 67
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhccCC
Q 009563 488 GGWLPFAVFAACGIIGGLFAFYLPET 513 (532)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (532)
|+...|.+.+++.+++.++....+.+
T Consensus 367 G~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 367 GWPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 78888888888887776666555443
No 79
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=9.2e-25 Score=211.68 Aligned_cols=311 Identities=11% Similarity=0.072 Sum_probs=216.6
Q ss_pred CCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC-----CchHH-HHHHHHHHHHHHHHHhhc---chHH
Q 009563 112 GSSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRL-----GRKGS-LTVVCMMNAVFGCLTAFS---PNYS 182 (532)
Q Consensus 112 ~~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~ 182 (532)
.|.+.+|+|+ |.+++|+..+. .+...+ .+++|+++|| + ||||. ++.+.++.+++..+.++. .+.+
T Consensus 11 ~~~~~~~~g~---s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr-~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~ 84 (356)
T TIGR00901 11 LPYWLRSKNV---SLKTIGFFSLV-GLPYSL-KFLWSPLVDT-VYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP 84 (356)
T ss_pred HHHHHHHcCC---CHHHHHHHHHH-HHHHHH-HHHHHHHHhc-ccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence 3788999999 99999999765 555555 9999999999 7 89886 567777777777777777 4666
Q ss_pred HHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---c--------hHHHHHHHH
Q 009563 183 TYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---T--------WRALYIASS 251 (532)
Q Consensus 183 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~--------wr~~f~~~~ 251 (532)
.+....++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+. + ||..|++.+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~a 164 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTA 164 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHH
Confidence 77788888899888888999999999999999999999999999999999999988775 6 999999999
Q ss_pred HHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhcccc
Q 009563 252 IPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTG 331 (532)
Q Consensus 252 ~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (532)
+..++..++.++..||+++. +.+.++.. ++.+.
T Consensus 165 i~~l~~~~~~~~~~~e~~~~---~~~~~~~~--------------------------------------------~~~~~ 197 (356)
T TIGR00901 165 LLILPGLLVTLFLAKEPQED---ASVPKPLT--------------------------------------------QAVLK 197 (356)
T ss_pred HHHHHHHHHHHHhccCCCcc---cccchhHH--------------------------------------------HHHHH
Confidence 88777664444456664320 00000000 00011
Q ss_pred chhhhhcChH---HHHHHHHHHHHHHHHHHHHHHhhhccccCcchHHHH---HHHHH-HHHHHHHHHHHHHHhhhCCchh
Q 009563 332 SVIDVIKSPL---TRIRLFLAVTINFLCSVVYYGISLNVVNLQTNLYLN---VLVNA-VAEMPAFTITAVLLDKLGRKPM 404 (532)
Q Consensus 332 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~l~d~~gr~~~ 404 (532)
.++++++++. .+......++............+.+..+.+.+.... ....+ +..+++.++++++.||+|||+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~ 277 (356)
T TIGR00901 198 PIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA 277 (356)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3445555553 333333333333333333323333333333333222 22222 4567899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccc-------hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHH
Q 009563 405 TIGTLWFSGFFCLLGSLVKNNG-------IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQ 475 (532)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 475 (532)
+..+.++.++...++.+..... ...+......++.+++.+...+...++..|.+|++.||+.+|+.++..+
T Consensus 278 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 278 LLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 8888877777666555432111 1111455566677888889999999999999999999999999887654
No 80
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=1.4e-24 Score=215.03 Aligned_cols=342 Identities=15% Similarity=0.097 Sum_probs=212.3
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHh---hcc-----hHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTA---FSP-----NYSTY 184 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~---~~~-----~~~~l 184 (532)
..+.+++|+ |..+.|++.+++.++..++++++|+++|| +|||++++++..+.+++..... .++ .....
T Consensus 35 ~~l~~~~g~---s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (420)
T PRK09528 35 IWLHDINGL---SGTDTGIIFSANSLFALLFQPLYGLISDK-LGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGA 110 (420)
T ss_pred HHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667999 99999999999999999999999999999 9999999887666555433221 111 11112
Q ss_pred HHHHHHHHhhccccchhhhheeecccC--CCchhHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHH
Q 009563 185 VVLRMLTGFSTGGVGLCAFVLATEPVG--PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--TWRALYIASSIPSILFLLI 260 (532)
Q Consensus 185 ~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--~wr~~f~~~~~~~~~~~~~ 260 (532)
++++++.|.+.....+. +.++.+ .+++++.++......++|..+++.+++.+. +|++.|++.+++.++..++
T Consensus 111 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~ 186 (420)
T PRK09528 111 IVGGIYLGFGFLAGAGA----IEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVL 186 (420)
T ss_pred HHHHHHhhhhhccchhh----hhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHH
Confidence 23333344333333332 333332 345677888888889999999999998876 9999999988887776644
Q ss_pred HhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcCh
Q 009563 261 ILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSP 340 (532)
Q Consensus 261 ~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (532)
.++..+|.++....+ ++. ++ +. ++......++.+|+|
T Consensus 187 ~~~~~~~~~~~~~~~---~~~--------------------------~~----~~----------~~~~~~~~~~~l~~~ 223 (420)
T PRK09528 187 LFFAKPDAPSTAKVA---NAL--------------------------GA----NA----------SAVSLKDALALLKLP 223 (420)
T ss_pred Hhcccccccchhhhc---cch--------------------------hc----cc----------ccccHHHHHHHccCC
Confidence 444444433200000 000 00 00 000011234566666
Q ss_pred HHHHHHHHHHHHHHHH-----HHHHHHhhhccc-cCc-chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHH
Q 009563 341 LTRIRLFLAVTINFLC-----SVVYYGISLNVV-NLQ-TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSG 413 (532)
Q Consensus 341 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~ 413 (532)
.++...+......... ....|....... ..+ ...........+...++.++.+++.||+++|+.+..+.++..
T Consensus 224 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~ 303 (420)
T PRK09528 224 KFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMA 303 (420)
T ss_pred CeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 5543333222222211 112222222111 111 112233344456667889999999999999999888888888
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHH-HHHHHHHHHHHHHHHH-----Hh
Q 009563 414 FFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGC-ATQAAQLGAILAPFVV-----VL 487 (532)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~~~~~g~~i~p~~~-----~~ 487 (532)
+..+++.+..+. + ..++..++.+++.+...+....++.+.+|++.+++..+. .++...+|.+++|.+. ..
T Consensus 304 ~~~~l~~~~~~~--~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~ 379 (420)
T PRK09528 304 VRIIGSGFATGP--L--EVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI 379 (420)
T ss_pred HHHHHHHhcccH--H--HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh
Confidence 777776654332 2 344455566666666667777888999999999888765 5666778888888777 34
Q ss_pred hhhhHHHHHHHHHHHHHHHHhh
Q 009563 488 GGWLPFAVFAACGIIGGLFAFY 509 (532)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
|+...|.+.+++.++..++.++
T Consensus 380 G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 380 GFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred CchHHHHHHHHHHHHHHHHHHH
Confidence 6777888888777766555543
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.94 E-value=4.1e-24 Score=238.60 Aligned_cols=314 Identities=11% Similarity=-0.006 Sum_probs=222.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHh---hcchHHHHHHHHHHHHhhccccchh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTA---FSPNYSTYVVLRMLTGFSTGGVGLC 201 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~ 201 (532)
+....+++.+++.+++.++++++|+++|| +|||++++++.++..++.++.. .+++++.+++.|+++|++.+...+.
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr-~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 123 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADK-FSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPA 123 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchH
Confidence 44668999999999999999999999999 9999999998877666555443 4578999999999999999999999
Q ss_pred hhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-c-----------hHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 202 AFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ-T-----------WRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 202 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-~-----------wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
..+++.|++|+++|++++++...+..+|.++|+.+++++. . |++.+.+..+...+..++..+.+||+|
T Consensus 124 ~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1146)
T PRK08633 124 KYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVP 203 (1146)
T ss_pred HHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCC
Confidence 9999999999999999999999999999999999998875 2 344444444444333435556677765
Q ss_pred hhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHH
Q 009563 270 RWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLA 349 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (532)
.....+.+.+ .. .........++.+++++.++..++..
T Consensus 204 ~~~~~~~~~~-----------------------------------~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (1146)
T PRK08633 204 AAAPEVFDKK-----------------------------------KY-------LFPKLLWRNLKLLRSDRVLWLAIIGL 241 (1146)
T ss_pred CCCccccccc-----------------------------------cc-------ccHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 4211000000 00 00000112355677777666554444
Q ss_pred HHHHHHHHHHHHHhhhcc-ccCc---c-hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhc
Q 009563 350 VTINFLCSVVYYGISLNV-VNLQ---T-NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKN 424 (532)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~-~~~~---~-~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~ 424 (532)
.+.++........++.+. ...+ . .........+++.+++.++.+++.||+++++.+.++.++.+++.+++.+..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1146)
T PRK08633 242 SYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPS 321 (1146)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhh
Confidence 444443332222223222 2222 1 2334445566777889999999999999988888887777777666665442
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 425 NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
. + ..++..++.+++.+...+...+++.+..|++.||+++|+.+++..+|.++++.+.
T Consensus 322 ~--~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 322 L--A--SVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred H--H--HHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 1 1 4556667778888888888899999999999999999999999988887666555
No 82
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.94 E-value=1e-23 Score=210.58 Aligned_cols=320 Identities=15% Similarity=0.109 Sum_probs=227.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccC---CCCc-hHHHHHHHHHHHHHHHHHhhcch------HH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDS---RLGR-KGSLTVVCMMNAVFGCLTAFSPN------YS 182 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr---~~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~ 182 (532)
+.+.+++|+ ++.++|++.++..+..++..++.|+++|| |+|| |+.++.+..+.+++.+++.+.++ ..
T Consensus 24 ~~~~~~~g~---s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 24 FFYTDVLGL---SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHccCC---CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 556778999 99999999999999999999999999997 2677 45677888888888888876653 46
Q ss_pred HHHHHHHHHHhhccccchhhhheeeccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----------chHHHHHHHH
Q 009563 183 TYVVLRMLTGFSTGGVGLCAFVLATEPV-GPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----------TWRALYIASS 251 (532)
Q Consensus 183 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----------~wr~~f~~~~ 251 (532)
.+++.+++.+++.+...+...++..|.. ++++|++..++...+..+|..+++.+.+.+. +||+.+++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 6778889999988887777788889987 4689999999988888888776655433221 7999999999
Q ss_pred HHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhcccc
Q 009563 252 IPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTG 331 (532)
Q Consensus 252 ~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (532)
++.++..++.++..||.++.. + ++ + ++ +.+...
T Consensus 181 ~l~~~~~~~~~~~~~e~~~~~----~-~~----------------------------~----~~----------~~~~~~ 213 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERYSEI----P-KN----------------------------I----EK----------KLSLKQ 213 (437)
T ss_pred HHHHHHHHHHHcCCEecCCCC----C-cc----------------------------c----cc----------CCCHHH
Confidence 888887766677777753100 0 00 0 00 000112
Q ss_pred chhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhccccC-c--chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHH
Q 009563 332 SVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVVNL-Q--TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGT 408 (532)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~ 408 (532)
.++.++++|.++......++............+++.+.. + ...........++.+++.++.+++.||+|+|+.+..+
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~ 293 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGG 293 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 456778888776655544444444333222223332221 1 1222233444677788899999999999999999888
Q ss_pred HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcccccc-------chhhhhHHHHHHHHHHHHHHHH
Q 009563 409 LWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFP-------TVVRNAALGCATQAAQLGAILA 481 (532)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~~g~~i~ 481 (532)
..+.+++.+.+.+..+ +.+ ...+..++.+++.+...+..+++..|..+ ++.+|.+.|+.+....+|..++
T Consensus 294 ~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg 370 (437)
T TIGR00792 294 ILLMVLGYLIFFFAGS-NLP--LILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALA 370 (437)
T ss_pred HHHHHHHHHHHHHcch-hHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHH
Confidence 8877777766655432 211 34455667778888888888888888865 4567999999999999998888
Q ss_pred HHHH
Q 009563 482 PFVV 485 (532)
Q Consensus 482 p~~~ 485 (532)
+.+.
T Consensus 371 ~~i~ 374 (437)
T TIGR00792 371 GFLV 374 (437)
T ss_pred HHHH
Confidence 8776
No 83
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=5.2e-24 Score=236.76 Aligned_cols=312 Identities=12% Similarity=-0.009 Sum_probs=219.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHH---HHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhh
Q 009563 126 KYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTV---VCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCA 202 (532)
Q Consensus 126 ~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 202 (532)
....++..+++.++++++++++|+++|| +|||+++.. ..++..+..+.....+++++++++|+++|++.+...|+.
T Consensus 51 ~~~~~l~~~~~~l~~~l~~~~~G~laDr-~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~ 129 (1140)
T PRK06814 51 NALVTLAGAVFILPFFIFSALAGQLADK-YDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIK 129 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhhhh-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHH
Confidence 3568899999999999999999999999 999997533 223333333333445899999999999999999999999
Q ss_pred hheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHH
Q 009563 203 FVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLN 279 (532)
Q Consensus 203 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~ 279 (532)
.+++.|++++++|++++++.+++.++|.++||++++++. +|++.|++.++..++.. +..+++|+++... ++...
T Consensus 130 ~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~ 206 (1140)
T PRK06814 130 YSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGW-LASLFIPKTGNAA--PDLKI 206 (1140)
T ss_pred HHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHhhCCCCCCCC--CCCee
Confidence 999999999999999999999999999999999999987 99999955555544443 5666676653200 00000
Q ss_pred HHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHH
Q 009563 280 EAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVV 359 (532)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (532)
+ .. ..+.....++.+.+++.++...+..++.++.....
T Consensus 207 ~-~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (1140)
T PRK06814 207 D-RN-----------------------------------------IIRSTITLLKYAKADKRIWLAILGISWFWLVGAVV 244 (1140)
T ss_pred c-cc-----------------------------------------hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 0 00 00000124566777887776666555555444333
Q ss_pred HHHhhhcccc-Ccc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhh-------------
Q 009563 360 YYGISLNVVN-LQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLV------------- 422 (532)
Q Consensus 360 ~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~------------- 422 (532)
....+.+... .+. .........+++.++|.++.+++.++..+++.+..+.++.+++.+.+.+.
T Consensus 245 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 324 (1140)
T PRK06814 245 LSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKS 324 (1140)
T ss_pred HHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccc
Confidence 3333433332 222 23444556667888999999999988776666655555555444433332
Q ss_pred -----hccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 423 -----KNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 423 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
.....+ ..++..++.+++.+...+...+++.+.+|++.+|+++|+.++...+|..+++.+.
T Consensus 325 ~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~ 390 (1140)
T PRK06814 325 ILVFLSKRHGW--RILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIIL 390 (1140)
T ss_pred hhhhhcccccH--HHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHH
Confidence 001111 4456666778888888888999999999999999999999999999988888776
No 84
>PTZ00207 hypothetical protein; Provisional
Probab=99.94 E-value=4.8e-24 Score=211.93 Aligned_cols=387 Identities=13% Similarity=0.049 Sum_probs=242.6
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc------chHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS------PNYSTYVV 186 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~l~~ 186 (532)
|.+++++|+ |..+.+++.++. ....+++++.|++.|| +|||+++.++.+++++++++++++ ++++.+.+
T Consensus 51 ~~L~~~lgl---s~~~l~~i~svg-~~~g~~~lp~G~L~Dr-~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l 125 (591)
T PTZ00207 51 GAMQARYNL---TQRDLSTITTVG-IAVGYFLLPYSFIYDY-LGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSV 125 (591)
T ss_pred HHHHHHhCc---CHHHHHHHHHHH-HHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHH
Confidence 789999999 999999998874 4556778899999999 999999999999999999999987 68999999
Q ss_pred HHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHH-HHHHHHHhh-chHHHHHHHHHHHHHHHHHHhcc
Q 009563 187 LRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIAL-LSGIAYIFQ-TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 187 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~l~~~l~-~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
.|++.|+|.+...+.....+.+|+| ++||++.++...+.++|.++ +++..+++. +|+..|++.+++.++..++.+.+
T Consensus 126 ~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 126 YNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999996 78999999999999999986 555555555 89999999999888887777776
Q ss_pred cccCc--hhHhhcCCHHHHHHHHHHHHHH---------------------------------------------------
Q 009563 265 LPESP--RWYLVRGKLNEAMKIMRAIAKS--------------------------------------------------- 291 (532)
Q Consensus 265 ~~esp--~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 291 (532)
+++.| ++...+++.++.++..++..+.
T Consensus 205 vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~ 284 (591)
T PTZ00207 205 MRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVI 284 (591)
T ss_pred eeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 66554 3322222112221111100000
Q ss_pred ---------------hCCCCCc-cccccchhhhhhh-hhcCccch--hhhhh-hhhccccchhhhhcChHHHHHHHHHHH
Q 009563 292 ---------------NGRHLPD-GVVLMLDDEQEND-ASNGKQNY--KEELA-TKEAVTGSVIDVIKSPLTRIRLFLAVT 351 (532)
Q Consensus 292 ---------------~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (532)
.+...++ +.+.+..+..+.. +....+.. ..+.+ ..++...++++.+++..+|..++..++
T Consensus 285 ~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~c 364 (591)
T PTZ00207 285 VLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFC 364 (591)
T ss_pred HHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHH
Confidence 0000000 0000000000000 00000000 00000 101122377788888777755554444
Q ss_pred HHHHHHHHHHHhhhccccC-----cchHHH-HHHHHHHHHHHHHHHHHHHHhhhCC--------chhHHHHHHHHHHHHH
Q 009563 352 INFLCSVVYYGISLNVVNL-----QTNLYL-NVLVNAVAEMPAFTITAVLLDKLGR--------KPMTIGTLWFSGFFCL 417 (532)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~l~d~~gr--------~~~~~~~~~~~~~~~~ 417 (532)
.........+-.....+.. ..+... ...+.++++.+|.+..|++.....+ |...+....++.++.+
T Consensus 365 g~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~l 444 (591)
T PTZ00207 365 CVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITML 444 (591)
T ss_pred hhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHH
Confidence 3333211111111111111 111111 3456678888899988887722211 1223333333555555
Q ss_pred HHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH---Hh-------
Q 009563 418 LGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV---VL------- 487 (532)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~---~~------- 487 (532)
++.+..... .+++..++.+++.|..+++....++|+|. ++-|+-.-+.....-+|..+..-.. .+
T Consensus 445 ll~~~~p~~----~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~ 519 (591)
T PTZ00207 445 TLFLTLPKA----ALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKL 519 (591)
T ss_pred HHHHHCCcc----HhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 555553322 57788899999999999999999999999 7767766666665555555542222 11
Q ss_pred ------h---hhhHHHHHHHHHHHHHHHHhhc
Q 009563 488 ------G---GWLPFAVFAACGIIGGLFAFYL 510 (532)
Q Consensus 488 ------~---~~~~~~~~~~~~~~~~~~~~~l 510 (532)
| ...+|++.+++++++.+...++
T Consensus 520 ~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 520 GQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred CCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 1 4568999999988888876544
No 85
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.93 E-value=3.3e-23 Score=204.43 Aligned_cols=362 Identities=16% Similarity=0.080 Sum_probs=222.9
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
+.+.+|+|- .....|+.+.+.++.+++.++.|.++|. ||||.+++.+.++..+|++.++.++|...++++..+.|
T Consensus 68 ~~I~~diG~----~~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G 142 (599)
T PF06609_consen 68 PYINADIGG----SDNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG 142 (599)
T ss_pred HHHHHhcCC----CccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH
Confidence 678888885 5778899999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
+|.|.... ....++|..|.|.|....++...........++.++..+. +|||.|++.+++..+.++..+++... |
T Consensus 143 vgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~P-P 220 (599)
T PF06609_consen 143 VGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFP-P 220 (599)
T ss_pred HhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 99777664 4556899999999988877776665555556777776554 99999999998877766444443332 3
Q ss_pred hhHhhcCC---HHHHHHHHHHHHH-------------Hh--CCCCCcccccc-chhhhh-hhhhcCccchhhhhhhhhcc
Q 009563 270 RWYLVRGK---LNEAMKIMRAIAK-------------SN--GRHLPDGVVLM-LDDEQE-NDASNGKQNYKEELATKEAV 329 (532)
Q Consensus 270 ~~~~~~~~---~~~~~~~~~~~~~-------------~~--~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 329 (532)
++...+++ ..+..+.++.+.- -+ +....+..... ...-.. -...-.---|+. ....+.
T Consensus 221 ~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~--~~~~~~ 298 (599)
T PF06609_consen 221 PRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEW--FGAPKD 298 (599)
T ss_pred chhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhh--hccCCC
Confidence 22212221 1122222221100 00 00000000000 000000 000000000000 000111
Q ss_pred ccchhhhhcChHHH-HHHHHHHHHHHHH-HHHHHHhhhccccCcc------hHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 009563 330 TGSVIDVIKSPLTR-IRLFLAVTINFLC-SVVYYGISLNVVNLQT------NLYLNVLVNAVAEMPAFTITAVLLDKLGR 401 (532)
Q Consensus 330 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~d~~gr 401 (532)
+--..++||+++.. ..+++.++..... +..++.......-+.. .........+++..+|.++.+.+..+++|
T Consensus 299 Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~ 378 (599)
T PF06609_consen 299 PLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRH 378 (599)
T ss_pred CcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccc
Confidence 22345677774322 2222222221111 1111111111111111 22334455667777888888999988876
Q ss_pred ch-hHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHH
Q 009563 402 KP-MTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAIL 480 (532)
Q Consensus 402 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i 480 (532)
-| .++++..++.+++.++.....++.. ..+...++.+++.+.........+.-..|++.-+++.|+..+++.+|+.+
T Consensus 379 ~Kw~li~~~~~~ta~~Gama~~~~~n~~--~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsI 456 (599)
T PF06609_consen 379 IKWQLIFGSVLMTAFCGAMAAVRPDNKN--AAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSI 456 (599)
T ss_pred hhHHHHHHHHHHHHHHHHHHHccCCCcc--hHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHH
Confidence 54 4456776776666666655443333 34566778888888877778888888899999999999999999999888
Q ss_pred HHHHH
Q 009563 481 APFVV 485 (532)
Q Consensus 481 ~p~~~ 485 (532)
+..+.
T Consensus 457 g~aIy 461 (599)
T PF06609_consen 457 GYAIY 461 (599)
T ss_pred HHHHH
Confidence 75554
No 86
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.93 E-value=2.3e-24 Score=203.81 Aligned_cols=368 Identities=12% Similarity=0.013 Sum_probs=235.3
Q ss_pred CceeecccccchhhhH-HHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYK-VGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLT 191 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~-~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 191 (532)
|.+.+|+|+ ++.| .|.+.++++.++++++++.|+++|| +|.|+++.++.+.+++.+++.++++++..+.+.|++.
T Consensus 50 p~L~~elgl---T~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ll 125 (511)
T TIGR00806 50 PYLLTVLNF---TEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFY 125 (511)
T ss_pred HHHHHHcCC---CHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999 9999 9999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHH--HHHHHHHHHHHhccccc
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--TWRALYIAS--SIPSILFLLIILPFLPE 267 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--~wr~~f~~~--~~~~~~~~~~~~~~~~e 267 (532)
|++.|... +...++..|+|+++|+++.++...+..+|.++++++++++. |||+.+.+. ...+.++.++..+++|.
T Consensus 126 GvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 126 SVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKR 204 (511)
T ss_pred HHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999 99999999999999999999999999999999999999855 998765433 33344444467788886
Q ss_pred CchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHH-HH
Q 009563 268 SPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRI-RL 346 (532)
Q Consensus 268 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 346 (532)
.++.+.-+++.+.... ...+.+....++. . +..+.........-......+++..+|+.... .+
T Consensus 205 ~~~sl~f~~~~~~~~~------------~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSl 269 (511)
T TIGR00806 205 PKRSLFFNRLEDVRGA------------LPCELDQMVPGPG-G--KLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSL 269 (511)
T ss_pred Cchhhhhccccccccc------------cccccccCCCCCc-c--ccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhH
Confidence 6654433321110000 0000000000000 0 00000000000111222345556667765433 33
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCc----chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHH--HHHHHHHHHHHH
Q 009563 347 FLAVTINFLCSVVYYGISLNVVNLQ----TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGT--LWFSGFFCLLGS 420 (532)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~--~~~~~~~~~~~~ 420 (532)
+..+.........+|...++....+ .+... -.+..+.+.+..+..|++-.+..+-..+.++ .++.+..++++.
T Consensus 270 Wwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~v-eA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~ 348 (511)
T TIGR00806 270 WWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAV-DAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMS 348 (511)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHH-HHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhh
Confidence 3333333334455555555532212 11111 1222233445677777774444332223332 233333333333
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH----Hh---------
Q 009563 421 LVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV----VL--------- 487 (532)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~~--------- 487 (532)
... +.| +.++..+++...+....++...-+++....+.-|..+|+.+++..+-..+-..++ .+
T Consensus 349 ~t~--~Iw--~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~ 424 (511)
T TIGR00806 349 QSH--DIW--VLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFR 424 (511)
T ss_pred ccc--chH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEE
Confidence 322 222 6777888888888888888888778877777779999999888766655544333 11
Q ss_pred hhhhHHHHHHHHHHHHHH
Q 009563 488 GGWLPFAVFAACGIIGGL 505 (532)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~ 505 (532)
-+...|.+++++.++..+
T Consensus 425 vY~~yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 425 IYSVYFLVLSIICFFGAG 442 (511)
T ss_pred ehhhHHHHHHHHHHHHHH
Confidence 144456666655555544
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.93 E-value=1.5e-23 Score=209.07 Aligned_cols=380 Identities=12% Similarity=0.004 Sum_probs=232.8
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHH-HHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYST-YVVLRMLT 191 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~ 191 (532)
..+.+++|+ +..+.+++.+.+.....+..+++|+++||++|||++++++.+++++++++++++.+... ++++|+++
T Consensus 39 ~yl~~~lg~---~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~ 115 (489)
T PRK10207 39 VFFVKQLGF---SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTI 115 (489)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 455678999 99999999999998889999999999996479999999999999999999999876554 55899999
Q ss_pred HhhccccchhhhheeecccCCC--chhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 192 GFSTGGVGLCAFVLATEPVGPS--KRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
|+|.|...+...+++.|.+|++ +|++++++++.+.++|..++|.+++++. |||+.|++.++. ++..++.+.+.+
T Consensus 116 ~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~-~~~~~~~~~~~~ 194 (489)
T PRK10207 116 AVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAG-LIIALLVYFACR 194 (489)
T ss_pred HhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHHHHcc
Confidence 9999999999999999999877 4577899999999999999999999987 999999986553 333323333333
Q ss_pred cCchhHh--hcC-CHHHHHHHH---------HHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchh
Q 009563 267 ESPRWYL--VRG-KLNEAMKIM---------RAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVI 334 (532)
Q Consensus 267 esp~~~~--~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (532)
+..+... .++ +.|.....+ -.............. ... ...... .... ..++. + ..
T Consensus 195 ~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~i~---~~~f--~~~~~-~----~~ 261 (489)
T PRK10207 195 GMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANL--VLI-VLSIVV---TIIF--FREAF-K----LD 261 (489)
T ss_pred hhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHH--HHH-HHHHHH---HHHH--HHHHh-c----CC
Confidence 2211000 001 111100000 000000000000000 000 000000 0000 00000 0 01
Q ss_pred hhhcChHHHHHHHH--HHHHHHHHHHHHHHhhhcccc-Ccc-------hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchh
Q 009563 335 DVIKSPLTRIRLFL--AVTINFLCSVVYYGISLNVVN-LQT-------NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPM 404 (532)
Q Consensus 335 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~ 404 (532)
+.+|++.+....+. ..+.+.......+..+.+.++ ... ..........+..++..++.+++.||+++|+.
T Consensus 262 ~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~ 341 (489)
T PRK10207 262 KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGK 341 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCC
Confidence 34444433222111 122222222222333333321 111 11222223334455677778899999998863
Q ss_pred -------HHHHHHHHHHHHHHHH-----hhhc-cchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHH
Q 009563 405 -------TIGTLWFSGFFCLLGS-----LVKN-NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCAT 471 (532)
Q Consensus 405 -------~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 471 (532)
+.++.++.+++++.+. .... .....++.+...++.+++.....+...+++.+..|++.++.++|+.+
T Consensus 342 ~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~ 421 (489)
T PRK10207 342 DLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWF 421 (489)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHH
Confidence 6667777666655432 1111 11111245667788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-h--------------hhhhHHHHHHHHHHHHHHHHhh
Q 009563 472 QAAQLGAILAPFVVV-L--------------GGWLPFAVFAACGIIGGLFAFY 509 (532)
Q Consensus 472 ~~~~~g~~i~p~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
....+|+.++..+.. . .+...|...++..+++.++.+.
T Consensus 422 l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 422 LTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999899888877661 1 1345566666655555554433
No 88
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=2.5e-23 Score=204.54 Aligned_cols=341 Identities=15% Similarity=0.096 Sum_probs=221.9
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHH---hhcc-----hHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLT---AFSP-----NYSTYV 185 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~---~~~~-----~~~~l~ 185 (532)
.+.+++|+ +..+.|++.+++.++..+++++.|+++|| +|||+.++.+....+++.... .+.+ .+..++
T Consensus 28 ~~~~~~g~---s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (396)
T TIGR00882 28 WLHDVNGL---SKTDTGIVFSCISLFSILFQPLFGLISDK-LGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAI 103 (396)
T ss_pred HHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 44567899 99999999999999999999999999999 999999988777665544332 1221 234456
Q ss_pred HHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHhc
Q 009563 186 VLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--TWRALYIASSIPSILFLLIILP 263 (532)
Q Consensus 186 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--~wr~~f~~~~~~~~~~~~~~~~ 263 (532)
+.|++.|++.+...+....+..|.. +++++..+......++|.++++.+++.+. +||+.|++.+++.++..++.+.
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 104 VGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred HHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHH
Confidence 7789999988888888877776643 33455667777888999999999988776 9999999998888876644444
Q ss_pred ccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHH
Q 009563 264 FLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTR 343 (532)
Q Consensus 264 ~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (532)
..||+|+. ++.++ .. +.+ +.+....+.++++|+|.++
T Consensus 182 ~~~~~~~~-------~~~~~--------~~-------------------~~~---------~~~~~~~~~~~~l~~~~~~ 218 (396)
T TIGR00882 182 AKPKAPSS-------ATVAN--------AL-------------------GAN---------ASAFSLKLALELFRQRKFW 218 (396)
T ss_pred hCCCCchh-------hhhhc--------cc-------------------ccc---------cCCCCHHHHHHHHcCCcHH
Confidence 44444320 00000 00 000 0000112456778888765
Q ss_pred HHHHHHHHHHHHHHHH-----HHHhhhccc-cCc-chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHH
Q 009563 344 IRLFLAVTINFLCSVV-----YYGISLNVV-NLQ-TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFC 416 (532)
Q Consensus 344 ~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~ 416 (532)
...+..+......... .|....... ..+ ...........+...++.+..+++.||+++|+.+.++..+.++..
T Consensus 219 ~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~ 298 (396)
T TIGR00882 219 MFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRI 298 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence 4444333322222111 122222111 111 112233344455667778899999999999999988888777766
Q ss_pred HHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHH-HHHHHHHHHHHHHHHH-----Hhhhh
Q 009563 417 LLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGC-ATQAAQLGAILAPFVV-----VLGGW 490 (532)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~~~~~g~~i~p~~~-----~~~~~ 490 (532)
.+.....+ .+ ...+..++.+++..........+..+..|++.++++.+. .+....+|+.++|.+. ..|+.
T Consensus 299 ~~~~~~~~--~~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~ 374 (396)
T TIGR00882 299 IGSSFATT--AL--EVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQ 374 (396)
T ss_pred HHHHhcCC--hH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccH
Confidence 65554332 22 334455556666555555566677788888888887766 5677788888888666 45677
Q ss_pred hHHHHHHHHHHHHHHHH
Q 009563 491 LPFAVFAACGIIGGLFA 507 (532)
Q Consensus 491 ~~~~~~~~~~~~~~~~~ 507 (532)
..|.+.+++.++..+..
T Consensus 375 ~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 375 GAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888887777665543
No 89
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.93 E-value=4.5e-23 Score=201.47 Aligned_cols=330 Identities=11% Similarity=-0.028 Sum_probs=222.6
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCch----HHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRK----GSLTVVCMMNAVFGCLTAFSPNYSTYVVLR 188 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 188 (532)
|.+.+|+|. |..++|++.+++.++..++++++|++.|| +||| +.+.++..+. .......+++++.+++.|
T Consensus 28 ~~~l~~~g~---s~~~iG~~~~~~~l~~~l~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~ 101 (382)
T PRK11128 28 SVWLKGQGY---TPETIGLLLGAGLVARFLGSLLIAPRVKD-PSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAI 101 (382)
T ss_pred HHHHHhcCC---CHHHHHHHHHHHHHHHHhhhHHHHHHHhh-hcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHH
Confidence 667788999 99999999999999999999999999999 9984 3333332222 223344568899999999
Q ss_pred HHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhccc
Q 009563 189 MLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFL 265 (532)
Q Consensus 189 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~ 265 (532)
++.|++.+...+...+++.++ +++|++..+......++|.++||++++.+. |||..|++.++..++.. +..++.
T Consensus 102 ~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~ 178 (382)
T PRK11128 102 GLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML-LGQLLR 178 (382)
T ss_pred HHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHcc
Confidence 999999998899888877776 356788888888899999999999999886 99999998876555443 333444
Q ss_pred ccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHH
Q 009563 266 PESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIR 345 (532)
Q Consensus 266 ~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (532)
||.++ +++.+ + +.++...++++++|+|.++..
T Consensus 179 ~~~~~----~~~~~------------------------------------~--------~~~~~~~~~~~i~~~~~~~~~ 210 (382)
T PRK11128 179 PTIMP----QGESR------------------------------------Q--------QESAGWPAWKALLKEPTVWRF 210 (382)
T ss_pred CCCCC----ccccc------------------------------------c--------ccccccchHHHHHcChhHHHH
Confidence 44311 00000 0 000011256788888877766
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhh
Q 009563 346 LFLAVTINFLCSVVYYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLV 422 (532)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~ 422 (532)
....++........+...+.+..+.+.+ .........+..++..++.+++.||+++|+.+..+.++.++..+++...
T Consensus 211 ~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T PRK11128 211 LLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST 290 (382)
T ss_pred HHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 5555554444332222223333333322 2333334456677778899999999999999888888887776665543
Q ss_pred hccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHH-HHHHHHHHHHHH-----HhhhhhHHHHH
Q 009563 423 KNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQA-AQLGAILAPFVV-----VLGGWLPFAVF 496 (532)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~-~~~g~~i~p~~~-----~~~~~~~~~~~ 496 (532)
++ .+ ..++..++.+++.+...+....+..+. +++++++..++.+.. ..+|..++|.+. ..+. ..++..
T Consensus 291 ~~--~~--~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~ 364 (382)
T PRK11128 291 TA--LP--WLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVM 364 (382)
T ss_pred hh--HH--HHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHH
Confidence 32 22 455667777888887778888887776 555678888888644 455667777766 2233 455555
Q ss_pred HHHHHHHHH
Q 009563 497 AACGIIGGL 505 (532)
Q Consensus 497 ~~~~~~~~~ 505 (532)
+++.+++.+
T Consensus 365 ~~~~~~~~~ 373 (382)
T PRK11128 365 ALVALPALF 373 (382)
T ss_pred HHHHHHHHH
Confidence 555554433
No 90
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.93 E-value=6e-23 Score=203.81 Aligned_cols=334 Identities=16% Similarity=0.116 Sum_probs=241.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc-----chHHHHHHHHHHHHhhccccc
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS-----PNYSTYVVLRMLTGFSTGGVG 199 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~ 199 (532)
|+..++++.++..+...+.++++|.++|| +.||++++.+-++.++..++.++. .+.+.+++.-++.|++.+...
T Consensus 43 S~~~valv~~a~~LP~~Llsl~aG~laDr-~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~ 121 (524)
T PF05977_consen 43 SPLMVALVQAASTLPILLLSLFAGALADR-FDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFN 121 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999 999999999988877665544432 478899999999999999999
Q ss_pred hhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcC
Q 009563 200 LCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRG 276 (532)
Q Consensus 200 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~ 276 (532)
|+..+++.|..|+++...+.++.++..++..++||.++|.+. |-.+.|++.++..++.. +.....+..++ .+.
T Consensus 122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i-~~l~~~~~~~~---~~~ 197 (524)
T PF05977_consen 122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISI-LALLRWKPPPP---PSS 197 (524)
T ss_pred HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcccccc---ccc
Confidence 999999999999999999999999999999999999999876 77888888877666544 33333332110 000
Q ss_pred CHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHH
Q 009563 277 KLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLC 356 (532)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (532)
.. .++.. ...+..++-+.++|..+..+....+..+..
T Consensus 198 ~~--~e~~~-----------------------------------------~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~ 234 (524)
T PF05977_consen 198 LP--RERFF-----------------------------------------SALREGLRYVRSSPPLRSVLLRSFLFNLFA 234 (524)
T ss_pred cc--hhhhh-----------------------------------------hhHHHHHHHHhcchHHHHHHHHHHHHHHhh
Confidence 00 00000 011123445555665555444444444433
Q ss_pred HHHHHHhhhcccc-Cc---chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 009563 357 SVVYYGISLNVVN-LQ---TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVR 432 (532)
Q Consensus 357 ~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (532)
......++++..+ .+ ...+......+++.++|.++.+++.+|+++++++..+.++.+++++.+.+..+.. ..
T Consensus 235 ~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~----~~ 310 (524)
T PF05977_consen 235 SAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFW----LA 310 (524)
T ss_pred hHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHH----HH
Confidence 3333334444322 22 2334455667788889999999999999988888888888888777776654432 45
Q ss_pred HHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH
Q 009563 433 MICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
.+..++.|++.........+...+..|++.||++++++.+....+..+|.++. ..|....+.+.++..+++.++.
T Consensus 311 ~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 311 LIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 66677788888888888889999999999999999999888776666666655 4556666666666655555554
Q ss_pred hhc
Q 009563 508 FYL 510 (532)
Q Consensus 508 ~~l 510 (532)
...
T Consensus 391 ~~~ 393 (524)
T PF05977_consen 391 LRF 393 (524)
T ss_pred HHh
Confidence 433
No 91
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.4e-22 Score=183.48 Aligned_cols=312 Identities=14% Similarity=0.049 Sum_probs=237.8
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHh---hcchHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTA---FSPNYSTYVVLRM 189 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~ 189 (532)
|++++.|++ +..+.+++...++.|+.+.+++.|++.+| +|+|+.+++|+.++++++.++. ...++..++++-+
T Consensus 37 p~l~~~f~l---s~~~a~liqfaff~gYf~~~lpa~~~~kk-~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lF 112 (422)
T COG0738 37 PHLKEVFDL---TYFEASLIQFAFFGGYFIMSLPAGLLIKK-LGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALF 112 (422)
T ss_pred HHHHHHhCc---cHHHHHHHHHHHHHHHHHHhccHHHHHHH-hhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 899999999 99999999999999999999999999999 9999999999999999999985 5578999999999
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----------------------chHHHH
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----------------------TWRALY 247 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----------------------~wr~~f 247 (532)
+.|.|.+...+.+..++....++++..+.+.+.+.+.++|.+++|++++.+. .||++|
T Consensus 113 ila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pY 192 (422)
T COG0738 113 ILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPY 192 (422)
T ss_pred HHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHH
Confidence 9999999999999999999999999999999999999999999999987754 367777
Q ss_pred HHHHHHHHHHHHHHhc-ccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhh
Q 009563 248 IASSIPSILFLLIILP-FLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATK 326 (532)
Q Consensus 248 ~~~~~~~~~~~~~~~~-~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (532)
...+...+++.+.... ..|+.+.. .. +..
T Consensus 193 l~~~~~lvll~v~~~~~k~p~~~~~-----~~---------------------------------------------~~~ 222 (422)
T COG0738 193 LILAGLLVLLAVLILLSKLPDLQVA-----AP---------------------------------------------SLG 222 (422)
T ss_pred HHHHHHHHHHHHHHHhccCCcCCcc-----cc---------------------------------------------ccc
Confidence 7777666655522221 22322100 00 000
Q ss_pred hccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhcccc-Cc---chHHHHHHHHHHHHHHHHHHHHHHHhhhCCc
Q 009563 327 EAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVVN-LQ---TNLYLNVLVNAVAEMPAFTITAVLLDKLGRK 402 (532)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~ 402 (532)
++......+++++|.++...+..+++..........+..+..+ .+ .+........-.+.++|++++.++..|+...
T Consensus 223 ~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~ 302 (422)
T COG0738 223 ASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE 302 (422)
T ss_pred ccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 0011145678899988877777666665544333333333322 22 1222333444466788999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHH
Q 009563 403 PMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAP 482 (532)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p 482 (532)
+.+.+..+...+.++...+..+. +.+...++.+++++..+|...+...+..| ++-.. .|.......+|+++.|
T Consensus 303 k~Laf~a~~~ill~~~~~l~~g~-----v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~-~s~~l~maivGGAiiP 375 (422)
T COG0738 303 KYLAFYALIAILLLLAVALIGGV-----VALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSV-GSGLLVMAIVGGAIIP 375 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCh-----HHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccc-cceeeeeheecchHHH
Confidence 99988888888777777777663 56677888899999999999999999999 44333 3344445667888888
Q ss_pred HHH
Q 009563 483 FVV 485 (532)
Q Consensus 483 ~~~ 485 (532)
++.
T Consensus 376 ~l~ 378 (422)
T COG0738 376 PLQ 378 (422)
T ss_pred HHH
Confidence 887
No 92
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=1e-24 Score=197.25 Aligned_cols=329 Identities=16% Similarity=0.100 Sum_probs=234.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFV 204 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 204 (532)
+.+++|++.+.+.+.+.+.+++.|.+.|| +|+|..+++|+++..++++++++.+++++++++|.+||+|.+...++..+
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 78899999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred eeecccCCC-chhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHH
Q 009563 205 LATEPVGPS-KRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNE 280 (532)
Q Consensus 205 ~i~~~~~~~-~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~ 280 (532)
+++|.+|++ +|++++|+.-.+.++|..+||++|+.+. |.+.+|++.+++.++-..+.++.++.+.. +.+
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~------~~~- 255 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM------DPD- 255 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc------Ccc-
Confidence 999999865 4799999999999999999999999998 99999999999999988555555554321 000
Q ss_pred HHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHH
Q 009563 281 AMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVY 360 (532)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (532)
......++++++++|..+..............+.-
T Consensus 256 ---------------------------------------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLe 290 (464)
T KOG3764|consen 256 ---------------------------------------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLE 290 (464)
T ss_pred ---------------------------------------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhC
Confidence 00112367888999876554444444433333333
Q ss_pred HHhhhcccc-C---cchHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHH--HHHHHHHHHHHHHHhhhccchhHHHHHH
Q 009563 361 YGISLNVVN-L---QTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTI--GTLWFSGFFCLLGSLVKNNGIWKIVRMI 434 (532)
Q Consensus 361 ~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (532)
-.++.+..+ + ....+...+...+...+++.+.|.+.||++..+.+. .+.+...+++....+...... .++
T Consensus 291 Ptlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~----L~v 366 (464)
T KOG3764|consen 291 PTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQ----LWV 366 (464)
T ss_pred cccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHH----Hhh
Confidence 333333222 1 224445555666778889999999999999443332 333333333333333333322 222
Q ss_pred HHHHHHHHHHhhhh---hHhhhccccccch---hhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHH
Q 009563 435 CGVMGIFGVAGTYN---LLFIYTTELFPTV---VRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIG 503 (532)
Q Consensus 435 ~~~~~~~~~~~~~~---~~~~~~~~~~p~~---~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~ 503 (532)
-....+++.+...+ ....+..|.-..+ ..|.+.++......+|.++||.+. ..|..+...+.++..++.
T Consensus 367 p~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iy 446 (464)
T KOG3764|consen 367 PNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIY 446 (464)
T ss_pred hhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHH
Confidence 22222333333333 2333333332223 557888888888899999999888 567778777777777776
Q ss_pred HHHHhhc
Q 009563 504 GLFAFYL 510 (532)
Q Consensus 504 ~~~~~~l 510 (532)
.-++.++
T Consensus 447 apvl~ll 453 (464)
T KOG3764|consen 447 APVLLLL 453 (464)
T ss_pred HHHHHHH
Confidence 6655444
No 93
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.92 E-value=8.2e-22 Score=196.61 Aligned_cols=373 Identities=10% Similarity=-0.017 Sum_probs=225.1
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhcccc
Q 009563 119 WGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGV 198 (532)
Q Consensus 119 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 198 (532)
+|+ +..+.+++.+.+.++..++++++|+++||++|||+++.++.++.+++.++.+++++++.++++|++.|+|.|..
T Consensus 43 lg~---s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~ 119 (475)
T TIGR00924 43 LGF---SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLF 119 (475)
T ss_pred CCC---CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccc
Confidence 899 99999999999999999999999999997359999999999999999999999999999999999999999999
Q ss_pred chhhhheeecccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccc----cC
Q 009563 199 GLCAFVLATEPVGPSK---RGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLP----ES 268 (532)
Q Consensus 199 ~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~----es 268 (532)
.+...++++|++|+++ |+++.++...+.++|.++|+.+++.+. +||+.|++.++..++.. +.+++.+ +.
T Consensus 120 ~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~-l~~~~~~~~~~~~ 198 (475)
T TIGR00924 120 KANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL-LTFFAGRHMLRDI 198 (475)
T ss_pred cCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH-HHHHHcccccccC
Confidence 9999999999998764 888999999999999999999999886 89999998876554443 3333322 22
Q ss_pred chhHhhcCCHHHHHHHHHH----------HHH--HhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhh
Q 009563 269 PRWYLVRGKLNEAMKIMRA----------IAK--SNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDV 336 (532)
Q Consensus 269 p~~~~~~~~~~~~~~~~~~----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (532)
|+.. .+.+.++....... ... ...+. .. ...... ... .. .-.+ ...... ++ ...+.
T Consensus 199 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~--~~~--~~-~~~~-~~~~~~-~~--~~~~~ 266 (475)
T TIGR00924 199 GSVP-DPLSGQGKTYGKLLLALLAALALVFFCAWLMHHV-VI-ANILLM--TVT--LA-VIIF-FFRLAF-KP--RLDAV 266 (475)
T ss_pred CCCC-CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhcc-HH-HHHHHH--HHH--HH-HHHH-HHHHHH-hc--cCCHH
Confidence 2100 00000100000000 000 00000 00 000000 000 00 0000 000000 00 00011
Q ss_pred hcCh--HHHHHHHHHHHHHHHHHHHHHHhhhcccc-C-------cchHHHHHHHHHHHHHHHHHHHHHHHhhhCC-----
Q 009563 337 IKSP--LTRIRLFLAVTINFLCSVVYYGISLNVVN-L-------QTNLYLNVLVNAVAEMPAFTITAVLLDKLGR----- 401 (532)
Q Consensus 337 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr----- 401 (532)
-+++ .....++...+.+.........++.+..+ . ............+..++...+..++..|++|
T Consensus 267 ~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~ 346 (475)
T TIGR00924 267 ARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDP 346 (475)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 1111 11112222223333322222223322211 1 1112333334444444444443343334333
Q ss_pred chhH--HHHHHHHHHHHHHHHhh----hc-cchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHH
Q 009563 402 KPMT--IGTLWFSGFFCLLGSLV----KN-NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAA 474 (532)
Q Consensus 402 ~~~~--~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 474 (532)
+... .++.++.+++++.+.+. .. .....++.+...++.+++.....|...+++.+..|++.||+++|+.....
T Consensus 347 ~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~ 426 (475)
T TIGR00924 347 TTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQ 426 (475)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3333 56777777776666542 10 01112256778888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-----hhhhhHHHHHHHHHHHHHHHH
Q 009563 475 QLGAILAPFVVV-----LGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 475 ~~g~~i~p~~~~-----~~~~~~~~~~~~~~~~~~~~~ 507 (532)
.+|..+++.+.. .+....|...++..++..++.
T Consensus 427 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 427 AMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 999888887762 134445555555555544444
No 94
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.92 E-value=5.5e-23 Score=184.98 Aligned_cols=321 Identities=19% Similarity=0.121 Sum_probs=205.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFV 204 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 204 (532)
+....|.+.+.|.+++.+.++.+|.++|| +|||++++++++..++...+.++++|+..++++|++.|+..|- .....+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~-yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~v~rA 143 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDR-YGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LSVIRA 143 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hHHHHH
Confidence 67789999999999999999999999999 9999999999999999999999999997777779999997765 556889
Q ss_pred eeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc---------hHHHHHHHHHHHHHHHHHHhcccccCchhHhhc
Q 009563 205 LATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQT---------WRALYIASSIPSILFLLIILPFLPESPRWYLVR 275 (532)
Q Consensus 205 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~---------wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~ 275 (532)
+++|.+++|+|++.++.....+++|.++||.+|+++.- +-.+-++..+..........+++||+-.. +
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~---r 220 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPL---R 220 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccc---h
Confidence 99999999999999999999999999999999999862 11112222233333233566788998321 1
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChH-------HHHHHHH
Q 009563 276 GKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPL-------TRIRLFL 348 (532)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 348 (532)
++.++... ..+..+++.+. .+.+. ..-....+|+. ++...+.
T Consensus 221 k~~~~~~~----------------~~~~~~~~~~~---~~~~~------------~~~v~~lrn~p~~~~i~~~~i~~l~ 269 (451)
T KOG2615|consen 221 KRNDEHST----------------LQEAADDRLAL---LKFAR------------IFKVAALRNPPLLDFISVLRIFGLH 269 (451)
T ss_pred hhcccccc----------------hhhhhhhhhhh---cchhh------------hhhhhhhcCccccchHHHHHHHHHH
Confidence 11111000 00000000000 00000 00001112211 1112222
Q ss_pred HHHHHHHHHHHHHHhhhc-cccCcchHHHHHHHHHHHHHHHHHHHHHHHhhhCCc-----hhHHHHHHHHHHHHHHHHhh
Q 009563 349 AVTINFLCSVVYYGISLN-VVNLQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRK-----PMTIGTLWFSGFFCLLGSLV 422 (532)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~-----~~~~~~~~~~~~~~~~~~~~ 422 (532)
.+.+....+..-+..... ...++.+.....-+....++.+.++.+.+..+..|. -.+..+..++.-..+++...
T Consensus 270 ~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~ 349 (451)
T KOG2615|consen 270 YFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA 349 (451)
T ss_pred HHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc
Confidence 222222222222222222 233333333222222233344445555555544433 34445555555555555444
Q ss_pred hccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 423 KNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
.... .......+..+......+....++....|++.||++.|+..+.+.++.++||.+.
T Consensus 350 ~~~~----~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~ 408 (451)
T KOG2615|consen 350 RTPV----VLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVS 408 (451)
T ss_pred ccch----hhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhh
Confidence 4432 5667777888888888899999999999999999999999999999999999998
No 95
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.90 E-value=1e-22 Score=208.49 Aligned_cols=275 Identities=11% Similarity=0.090 Sum_probs=191.3
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc-------------
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP------------- 179 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~------------- 179 (532)
++++++|++ +..+.|++.+.+.++++++.++.|+++|| +|||+++.++.++++++++++++.+
T Consensus 57 ~~iek~F~l---ss~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 57 TTIERRFKL---STSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhhhCC---CCCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 899999999 99999999999999999999999999999 9999999999999999999998763
Q ss_pred --------------------------------------hHHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHH
Q 009563 180 --------------------------------------NYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMS 221 (532)
Q Consensus 180 --------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 221 (532)
.+..++++|+++|+|.+..++...+++.|++|+++|++++++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 245678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh----c---------------------hHHHHHHHHHHHHHHHHHHhcccccC-chhHhhc
Q 009563 222 TFYFFSTGIALLSGIAYIFQ----T---------------------WRALYIASSIPSILFLLIILPFLPES-PRWYLVR 275 (532)
Q Consensus 222 ~~~~~~~G~~~~~~l~~~l~----~---------------------wr~~f~~~~~~~~~~~~~~~~~~~es-p~~~~~~ 275 (532)
+..+..+|.++|+++++.+. + |+..|++.+++.++..+ .++++|+. |+.. .+
T Consensus 213 ~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v-~l~~~p~~lp~~~-~~ 290 (633)
T TIGR00805 213 LESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI-PFFFFPKALPKEG-KR 290 (633)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH-HHHhCccccCCcc-cc
Confidence 99999999999999988754 1 67778888888877664 44555554 3210 00
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHH
Q 009563 276 GKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFL 355 (532)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (532)
.+.+..++ ... +. . ..+.........+.....++.++++|.++...+..++....
T Consensus 291 ~~~~~~~~-------~~~-----------~~--~-----~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~ 345 (633)
T TIGR00805 291 VNVDVHET-------EKL-----------EK--S-----EDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLA 345 (633)
T ss_pred cchhhhhh-------hcc-----------cc--c-----ccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 00000000 000 00 0 00000000000111223567899999887776666666555
Q ss_pred HHHHHHHhhhccc-cCcchHHHHHHH---HHH-HHHHHHHHHHHHHhhhCC--chhHHHHHHHHHHHHHH
Q 009563 356 CSVVYYGISLNVV-NLQTNLYLNVLV---NAV-AEMPAFTITAVLLDKLGR--KPMTIGTLWFSGFFCLL 418 (532)
Q Consensus 356 ~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~-~~~~~~~~~~~l~d~~gr--~~~~~~~~~~~~~~~~~ 418 (532)
........+.+++ ..+.+......+ ..+ +.+++.+++|+++||+++ |+.+..+.++..+..++
T Consensus 346 ~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 346 FNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 5444444454443 344443333222 222 456889999999999874 45555666555555443
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.89 E-value=4e-20 Score=181.38 Aligned_cols=338 Identities=13% Similarity=0.025 Sum_probs=215.6
Q ss_pred CceeecccccchhhhHHHHH--HHHHHHHHHHHHHHH-HhhccCCCCchHHHHHHHHHH-HHHHHHHh---hcch-HHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLV--QALFFFGCMIGAGVF-GHLSDSRLGRKGSLTVVCMMN-AVFGCLTA---FSPN-YSTY 184 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~--~s~~~l~~~~~~~~~-g~l~dr~~Grr~~l~~~~~~~-~~~~~~~~---~~~~-~~~l 184 (532)
|.+.+|.|+ |..++|++ .++..+...+.++++ ++..|| +||||..++.+.+. ++.....+ ...+ ..++
T Consensus 25 p~~l~~~g~---~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (390)
T TIGR02718 25 PTLLREDGA---PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWA 100 (390)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHH
Confidence 888899999 99999997 466788888888888 457898 99999876655332 22222222 2222 3344
Q ss_pred HHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHH
Q 009563 185 VVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLII 261 (532)
Q Consensus 185 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~ 261 (532)
+..-++.++..+...+....+..|..++++++...+....+..+|.++++...+.+. |||..|++.++..++..+..
T Consensus 101 ~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~ 180 (390)
T TIGR02718 101 VGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 555566667777777778888888888888888888888888899999887776654 99999999998887766444
Q ss_pred hcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChH
Q 009563 262 LPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPL 341 (532)
Q Consensus 262 ~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (532)
++..|++++ +++.++ +...++++.+|+|.
T Consensus 181 ~~~~~~~~~----~~~~~~-----------------------------------------------~~~~~~~~~l~~~~ 209 (390)
T TIGR02718 181 LWLKDRAVA----SPEAPL-----------------------------------------------ARRASLFRFFRRPL 209 (390)
T ss_pred HHcCCCCcC----ccccch-----------------------------------------------hhHHHHHHHHcCcC
Confidence 443333221 000000 00113556778876
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCcchHHHHHHH---HH-HHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHH
Q 009563 342 TRIRLFLAVTINFLCSVVYYGISLNVVNLQTNLYLNVLV---NA-VAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCL 417 (532)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~ 417 (532)
.+......++........+...+.+..+.+.+....... .+ ...+++.++.+++.||+|+|+.+..+..+..+..+
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~ 289 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLAL 289 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 665555544444433333333344444444443333222 22 34556788999999999999988877665533322
Q ss_pred HHHhhhc---cchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccc-hhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh
Q 009563 418 LGSLVKN---NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPT-VVRNAALGCATQAAQLGAILAPFVV-----VLG 488 (532)
Q Consensus 418 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~ 488 (532)
....... ..... ..+....+.++..+...+...+...+..++ +.+++.+++.+....+|..++|.+. ..|
T Consensus 290 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G 368 (390)
T TIGR02718 290 LWFAQAAFWLAPGIA-VAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG 368 (390)
T ss_pred HHHHHHHcccCCcHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2221111 11111 223333444555666667667776666665 8889999999999999999999887 345
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 009563 489 GWLPFAVFAACGIIGGLF 506 (532)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~ 506 (532)
+...|.+.+++.+++.+.
T Consensus 369 ~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 369 YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 667777766666665443
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.89 E-value=1.6e-19 Score=176.28 Aligned_cols=363 Identities=15% Similarity=0.095 Sum_probs=237.0
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccC---CCCchHHHHHH-HHHHHHHHHHHhhcchHH------
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDS---RLGRKGSLTVV-CMMNAVFGCLTAFSPNYS------ 182 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr---~~Grr~~l~~~-~~~~~~~~~~~~~~~~~~------ 182 (532)
+.+.+++|+ +..+.+++..+..+...+.+++.|.++|| |+|||+.++++ .+...++.++.+++++..
T Consensus 28 ~~yl~~lg~---~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~ 104 (477)
T TIGR01301 28 TPYVQELGI---PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDN 104 (477)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcccc
Confidence 446678999 99999999999999999999999999993 39999988775 666666767777776643
Q ss_pred -----------HHHHHHHHHHhhccccchhhhheeecccCCCch--hHHHHHHHHHHHHHHHHHHHHHHHhh--------
Q 009563 183 -----------TYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKR--GAAGMSTFYFFSTGIALLSGIAYIFQ-------- 241 (532)
Q Consensus 183 -----------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~~~~l~~~l~-------- 241 (532)
.++++-.+..++.....+...+++.|.+|+++| +.+.++.+.+.++|.++|+.+++...
T Consensus 105 ~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~ 184 (477)
T TIGR01301 105 LDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFT 184 (477)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccc
Confidence 233333344557777888889999999998865 57899999999999999999987641
Q ss_pred ----------chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhh
Q 009563 242 ----------TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQEND 311 (532)
Q Consensus 242 ----------~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (532)
+.|..|++.++..++..++..+..+|.|... .++.++ + +.++
T Consensus 185 ~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~--~----------------------~~~~-- 236 (477)
T TIGR01301 185 KTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFIN--S----------------------EAAP-- 236 (477)
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchh--h----------------------hccc--
Confidence 5588999999888888878888999975310 000000 0 0000
Q ss_pred hhcCccchhhhhhhhhccccchhhhhc-ChHHHHHHHHHHHHHHHHHHHHHHhhhccc------cCc-chH--------H
Q 009563 312 ASNGKQNYKEELATKEAVTGSVIDVIK-SPLTRIRLFLAVTINFLCSVVYYGISLNVV------NLQ-TNL--------Y 375 (532)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~--------~ 375 (532)
.++.. .....+.-++.+.+ .+..++..++.++.|+.+....+..+.+.. ... ... .
T Consensus 237 --~~~~~------~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~ 308 (477)
T TIGR01301 237 --PSKHG------EEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGA 308 (477)
T ss_pred --ccccc------hhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHH
Confidence 00000 00000001111111 234555566666666654333222222211 100 111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCC-chhHHHHHHHHHHHHHHHHhhhccc----h-------------hHHHHHHHHH
Q 009563 376 LNVLVNAVAEMPAFTITAVLLDKLGR-KPMTIGTLWFSGFFCLLGSLVKNNG----I-------------WKIVRMICGV 437 (532)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~d~~gr-~~~~~~~~~~~~~~~~~~~~~~~~~----~-------------~~~~~~~~~~ 437 (532)
......++...+.+++..++.+|+|+ |++...+.++.++++....+..... . .....++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 22334445555677788889999985 6666788777777777776544210 0 0125667778
Q ss_pred HHHHHHHhhhhhHhhhccccccc--hhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh--hhhHHHHHHHHHHHHHHHH-
Q 009563 438 MGIFGVAGTYNLLFIYTTELFPT--VVRNAALGCATQAAQLGAILAPFVV-----VLG--GWLPFAVFAACGIIGGLFA- 507 (532)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~p~--~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~--~~~~~~~~~~~~~~~~~~~- 507 (532)
+.|+.....+.+.++++++..++ +..|..+|+.|.+..+.+++..+.. ..| ....+.+.++..++++++.
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999985 4559999999998887766655433 223 3445666667777777665
Q ss_pred hhccCCC
Q 009563 508 FYLPETL 514 (532)
Q Consensus 508 ~~l~~~~ 514 (532)
+.+|+.+
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 4567654
No 98
>PRK09669 putative symporter YagG; Provisional
Probab=99.89 E-value=8.9e-20 Score=181.83 Aligned_cols=318 Identities=14% Similarity=0.095 Sum_probs=210.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccC---CCCc-hHHHHHHHHHHHHHHHHHhhcch------HH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDS---RLGR-KGSLTVVCMMNAVFGCLTAFSPN------YS 182 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr---~~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~ 182 (532)
+...+++|+ +..++|.+.++..+..++..|+.|.++|| |+|| |+.++++.+..+++.++....++ +.
T Consensus 34 ~~~t~~~gl---s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 34 YFYTDVFGL---SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHhcCC---CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 345678899 99999999999999999999999999997 3677 56676787777777766554442 45
Q ss_pred HHHHHHHHHHhhccccchhhhheeeccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHH----hh------chHHHHHHHH
Q 009563 183 TYVVLRMLTGFSTGGVGLCAFVLATEPV-GPSKRGAAGMSTFYFFSTGIALLSGIAYI----FQ------TWRALYIASS 251 (532)
Q Consensus 183 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~l~~~----l~------~wr~~f~~~~ 251 (532)
.+++..++.+.+.......-.++..|+. ++++|++..++...+..+|..+++.+... +. +|+..+.+.+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 6666777777766667766778899988 45889988888888888877776654322 21 6888888888
Q ss_pred HHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhcccc
Q 009563 252 IPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTG 331 (532)
Q Consensus 252 ~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (532)
++.++..++.++..+|.++. .+ +++.+...
T Consensus 191 ii~~v~~~~~~~~~~e~~~~----~~----------------------------------------------~~~~~~~~ 220 (444)
T PRK09669 191 LLGVVLFFCCFFMTKERYTP----EV----------------------------------------------DNSSSVWK 220 (444)
T ss_pred HHHHHHHHHHhCCeEEecCC----CC----------------------------------------------cCCCCHHH
Confidence 87777665556665553210 00 00001122
Q ss_pred chhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhccccCc--ch-HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHH
Q 009563 332 SVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVVNLQ--TN-LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGT 408 (532)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~ 408 (532)
.++.+++|+.++..+...++.............++..... .+ .........+..+++.++.+++.||+|+|+.+..+
T Consensus 221 ~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~ 300 (444)
T PRK09669 221 DLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWT 300 (444)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 5667788887766555444433333222111222222111 11 11222233455667888899999999999998887
Q ss_pred HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcccccc-------chhhhhHHHHHHHHHHHHHHHH
Q 009563 409 LWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFP-------TVVRNAALGCATQAAQLGAILA 481 (532)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~~g~~i~ 481 (532)
..+..+..+.+.+....+.+ ..++..++.+++.+...+..+++++|..+ .+..|...|+.+....+|..++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg 378 (444)
T PRK09669 301 IVAFVILSALIFFIPPSNVW--LIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIG 378 (444)
T ss_pred HHHHHHHHHHHHHhCcchHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHH
Confidence 76655444433333322222 45556677888888888999999999875 2334667888888888888888
Q ss_pred HHHH
Q 009563 482 PFVV 485 (532)
Q Consensus 482 p~~~ 485 (532)
|.+.
T Consensus 379 ~~i~ 382 (444)
T PRK09669 379 GAVV 382 (444)
T ss_pred HHHH
Confidence 7766
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.88 E-value=8.1e-20 Score=183.37 Aligned_cols=376 Identities=12% Similarity=-0.012 Sum_probs=217.4
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC-CchHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRL-GRKGSLTVVCMMNAVFGCLTAFSP-NYSTYVVLRML 190 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l 190 (532)
..+.+++|+ +..+.+++.+.+........+++|+++|| + |||+.+.++.++.+++.+++++++ +.+.++++|++
T Consensus 46 ~yl~~~lg~---s~~~a~~~~~~~~~~~~~~~~~~G~LaDr-~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l 121 (500)
T PRK09584 46 VYLVKQLGM---SEADSITLFSSFSALVYGLVAIGGWLGDK-VLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMAT 121 (500)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 345678999 88888898888877767777899999998 7 999999999999999999998874 56677889999
Q ss_pred HHhhccccchhhhheeecccCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHH---HHh
Q 009563 191 TGFSTGGVGLCAFVLATEPVGPSK--RGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLL---IIL 262 (532)
Q Consensus 191 ~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~---~~~ 262 (532)
+|++.|...+...+++.|++|+++ |..+.+++..+.++|..++|.+++++. |||+.|++.++..++..+ ...
T Consensus 122 ~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~ 201 (500)
T PRK09584 122 IAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQ 201 (500)
T ss_pred HHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999998999999998654 456788889999999999999999886 999999988765444332 222
Q ss_pred cccccCchhHhhcCCHHHHHHHH------HHHHHHh-CCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhh
Q 009563 263 PFLPESPRWYLVRGKLNEAMKIM------RAIAKSN-GRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVID 335 (532)
Q Consensus 263 ~~~~esp~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (532)
..++|.++. ..+++.+...... -...... ....++.. .................. . ....+
T Consensus 202 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~--~--~~~~~ 269 (500)
T PRK09584 202 RWVKQYGSK-PDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIA-------RMALGVVALGIVVIFGKE--A--FAMKG 269 (500)
T ss_pred HHhccCCCC-CCccccchhhHHHHHHHHHHHHHHHHHHHhcchHH-------HHHHHHHHHHHHHHHHHH--H--hhcCH
Confidence 233332110 0000011100000 0000000 00000000 000000000000000000 0 00000
Q ss_pred hhcChHHHHHHHHHHHHHHHHHHHHHHhhhcc-----cc-----Cc--chHHHHHHHHHHHHHHHHHHHHHHHhhh----
Q 009563 336 VIKSPLTRIRLFLAVTINFLCSVVYYGISLNV-----VN-----LQ--TNLYLNVLVNAVAEMPAFTITAVLLDKL---- 399 (532)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~l~d~~---- 399 (532)
.-+++. ...+. .++........+...+..+ .. .+ ...........+..++...+..++.+|.
T Consensus 270 ~~~~~~-~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~ 347 (500)
T PRK09584 270 AARRKM-IVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL 347 (500)
T ss_pred HHHHHH-HHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC
Confidence 111111 11111 1111111111111111110 00 01 1122223334444444445554444444
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhhcc------chhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHH
Q 009563 400 GRKPMTIGTLWFSGFFCLLGSLVKNN------GIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQA 473 (532)
Q Consensus 400 gr~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 473 (532)
+..+.+.+++++.+++++.+...... ...+ +.+...++.+++.....|...+++.+..|++.||.++|+....
T Consensus 348 ~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~-~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~ 426 (500)
T PRK09584 348 PMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVN-WLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLT 426 (500)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHH-HHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 44466778888888888877665331 1112 5667788889999999999999999999999999999988766
Q ss_pred HHHHHHHHHHHHH---------------hhhhhHHHHHHHHHHHHHHHH
Q 009563 474 AQLGAILAPFVVV---------------LGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 474 ~~~g~~i~p~~~~---------------~~~~~~~~~~~~~~~~~~~~~ 507 (532)
..+|..++..+.. .++...|...+++.++..++.
T Consensus 427 ~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~ 475 (500)
T PRK09584 427 TAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLM 475 (500)
T ss_pred HHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 6666555544431 124566666666655444433
No 100
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.87 E-value=3.8e-19 Score=171.73 Aligned_cols=319 Identities=18% Similarity=0.214 Sum_probs=224.3
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCC-chHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLG-RKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLT 191 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 191 (532)
+..-++.|+ |..|+|.+.++..+...++++++|.++|| ++ +|+++.+..++.++...+....++++.+++..++.
T Consensus 26 ~~~L~~~G~---s~~qIG~l~a~~~~~~i~~~~~~g~~aDr-~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~ 101 (400)
T PF03825_consen 26 PLYLESRGF---SGTQIGILLAVGPLARIVSPPFWGAIADR-FGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLF 101 (400)
T ss_pred HHHHHhCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhH-hhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 455567788 99999999999999999999999999999 65 57888888888888777778888999998888888
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHH-----HHHHhh--chHHHHHHHHHHHHHHHHHHhcc
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSG-----IAYIFQ--TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~-----l~~~l~--~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
.+......|...++..+... +++.-.+-.....++|.+++.. +.+... +..+.+++.+...++.. ...+.
T Consensus 102 ~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~-~~~l~ 178 (400)
T PF03825_consen 102 SFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLA-GFALF 178 (400)
T ss_pred HHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHH-HHHHh
Confidence 88888888877777777664 2333334444455555544432 222221 22345666665555544 44556
Q ss_pred cccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHH
Q 009563 265 LPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRI 344 (532)
Q Consensus 265 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (532)
+|+.|.. +...+ +.++....+..+++|+|....
T Consensus 179 lp~~~~~---~~~~~--------------------------------------------~~~~~~~~~~~~llk~~~~~~ 211 (400)
T PF03825_consen 179 LPKTPPK---RSAKE--------------------------------------------SVKKLLGLDALKLLKNPRFLV 211 (400)
T ss_pred CCCCccc---cccCC--------------------------------------------CcccccchHHHHHhcCccHHH
Confidence 7776520 00000 000011123457899998888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCcc-h---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHH
Q 009563 345 RLFLAVTINFLCSVVYYGISLNVVNLQT-N---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGS 420 (532)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~ 420 (532)
.++..++........+...+.++++.+. . .........+.+++..+..+++.+|+|.++++.++.+..++-..++.
T Consensus 212 Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 212 FLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777777777777777777662 2 22233445567888889999999999999999999999999998888
Q ss_pred hhhccchh-HHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHH-HHHHHHHHHHHH
Q 009563 421 LVKNNGIW-KIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQA-AQLGAILAPFVV 485 (532)
Q Consensus 421 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~-~~~g~~i~p~~~ 485 (532)
...++... .........+.++..+..+.....++.+..|++.|+++.++++.. ..+|..+|..+.
T Consensus 292 ~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig 358 (400)
T PF03825_consen 292 YFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG 358 (400)
T ss_pred HhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 87444322 111222345688888899999999999999999999999998876 457777776666
No 101
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.87 E-value=9.9e-19 Score=175.33 Aligned_cols=323 Identities=15% Similarity=0.111 Sum_probs=209.9
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccC---CCCc-hHHHHHHHHHHHHHHHHHhhcc------hHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDS---RLGR-KGSLTVVCMMNAVFGCLTAFSP------NYST 183 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr---~~Gr-r~~l~~~~~~~~~~~~~~~~~~------~~~~ 183 (532)
.+.+.+|+ +..++|.+..+..+.-++..++.|.++|| |+|| |+.++++.+..+++.++....+ .+..
T Consensus 32 yyt~v~Gl---s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~ 108 (473)
T PRK10429 32 YYTDVVGL---SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVF 108 (473)
T ss_pred HHHHhcCC---CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHH
Confidence 34566789 99999999999999999999999999994 1799 6777778888888766664433 2445
Q ss_pred HHHHHHHHHhhccccchhhhheeeccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHh----h------chHHHHHHHHH
Q 009563 184 YVVLRMLTGFSTGGVGLCAFVLATEPV-GPSKRGAAGMSTFYFFSTGIALLSGIAYIF----Q------TWRALYIASSI 252 (532)
Q Consensus 184 l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l----~------~wr~~f~~~~~ 252 (532)
+++..++.+++.....+...+++.|.. ++++|.+..++...+.++|..+.+.+...+ . +|+...++.++
T Consensus 109 ~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~ 188 (473)
T PRK10429 109 VCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIA 188 (473)
T ss_pred HHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 666677778888888888888999998 589999999887777777755554443321 1 57777777777
Q ss_pred HHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccc
Q 009563 253 PSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGS 332 (532)
Q Consensus 253 ~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (532)
+.++..++.++..+|.+.. ... + .+ ++++.+.+..
T Consensus 189 ~~~~~~~~~~~~~~e~~~~----~~~-~--------------------------~~--------------~~~~~~~~~~ 223 (473)
T PRK10429 189 FFIVSTIITLRNVHEVYSS----DNQ-V--------------------------SA--------------EGSHLTLKDI 223 (473)
T ss_pred HHHHHHHHHHcCceecCCc----ccc-c--------------------------cc--------------cccCCCHHHH
Confidence 7666555556556664210 000 0 00 0000011224
Q ss_pred hhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHH
Q 009563 333 VIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTL 409 (532)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~ 409 (532)
++.+++|+.++..+...++.............++......+ ........++..+++.++.+++.||+|+|+.+..+.
T Consensus 224 ~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~ 303 (473)
T PRK10429 224 VALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGAS 303 (473)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 45567887766555554444443333322222333222111 222233344667788889999999999999988777
Q ss_pred HHHHHHHHHHHhh--hccchhHHHHHHHHHHHHHHHHhhhhhHhhhcccccc-------chhhhhHHHHHHHHHHHHHHH
Q 009563 410 WFSGFFCLLGSLV--KNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFP-------TVVRNAALGCATQAAQLGAIL 480 (532)
Q Consensus 410 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~~g~~i 480 (532)
.+..++.+.+... ......+ ..++..++.+++.+..++..+++.+|..+ .+..|...|+......+|..+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al 382 (473)
T PRK10429 304 IFPVLSCGVLLLMGLAAPHNAL-LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAF 382 (473)
T ss_pred HHHHHHHHHHHHHhccCchhHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHH
Confidence 7666555444332 1122221 44556667778888888888999999965 334566888888888888888
Q ss_pred HHHHH
Q 009563 481 APFVV 485 (532)
Q Consensus 481 ~p~~~ 485 (532)
++.+.
T Consensus 383 ~~~i~ 387 (473)
T PRK10429 383 AAFFI 387 (473)
T ss_pred HHHHH
Confidence 77665
No 102
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.86 E-value=8.8e-19 Score=157.83 Aligned_cols=309 Identities=17% Similarity=0.144 Sum_probs=235.2
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
++|++|+|+ |.+..|+++++..+...+.+++..+++.| +|.++.+..++++..++.++-... +.+.++.+-.+.|
T Consensus 36 ~~Ir~~~gl---s~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G 110 (395)
T COG2807 36 DEIRQDLGL---SFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAG 110 (395)
T ss_pred HHHHHHhcc---cHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHH
Confidence 899999999 99999999999999999999999999999 999999999999999999999887 8888999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhcccccC
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFLPES 268 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~~es 268 (532)
.|.+...+..+..|.+.+| |+-+..++++....++|..+++.+...+. +||....+-+.++++.+ +.| +|..
T Consensus 111 ~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl-~~W--lPq~ 186 (395)
T COG2807 111 AGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLAL-LIW--LPQA 186 (395)
T ss_pred hhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHH-HHH--hhhc
Confidence 9999999999999999997 56799999999999999999888877766 79999999898888866 443 3332
Q ss_pred chhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHH
Q 009563 269 PRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFL 348 (532)
Q Consensus 269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (532)
.|. + . .....+..+-..++|+|.-|...+.
T Consensus 187 ~r~-----~--~-------------------------------------------~~~~~~~~~~~~vw~~~~aW~vtLf 216 (395)
T COG2807 187 LRE-----Q--A-------------------------------------------ASIATKLVSVRKVWRSPLAWQVTLF 216 (395)
T ss_pred ccc-----c--c-------------------------------------------cccccccccccccccCchhHHHHHH
Confidence 110 0 0 0000111123457788866655444
Q ss_pred HHHHHHHHHHHHHHhhhccccCcchHH---HHHHHHHHHHHHHHHHHHHHHhhh-CCchhHHHHHHHHHHHHHHHHhhhc
Q 009563 349 AVTINFLCSVVYYGISLNVVNLQTNLY---LNVLVNAVAEMPAFTITAVLLDKL-GRKPMTIGTLWFSGFFCLLGSLVKN 424 (532)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~d~~-gr~~~~~~~~~~~~~~~~~~~~~~~ 424 (532)
..+..+..+..+-.++....+.+.+.. .......+.+++.++....+.+|. ++|+..+.....+.++...+.+.+.
T Consensus 217 mGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~ 296 (395)
T COG2807 217 MGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG 296 (395)
T ss_pred HHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh
Confidence 444444433333333443334344333 333455567788889999999874 5677777777788888887777766
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHhhhcccccc-chhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 425 NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFP-TVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
...++ ..++.|++.++.++...+.+....+ ++..+.-.|+.+.++++-..+||++.
T Consensus 297 ~~~~l-----w~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~ 353 (395)
T COG2807 297 QLPIL-----WALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLF 353 (395)
T ss_pred hHHHH-----HHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhH
Confidence 65432 2578889999999988888777764 45567788888899999999999998
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.86 E-value=1.1e-19 Score=180.75 Aligned_cols=335 Identities=11% Similarity=0.049 Sum_probs=217.2
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCC-----chHHHHHHHHHHH-HHHHHHhhcchHHH-HH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLG-----RKGSLTVVCMMNA-VFGCLTAFSPNYST-YV 185 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~G-----rr~~l~~~~~~~~-~~~~~~~~~~~~~~-l~ 185 (532)
|.+.+++|+ +..+++...+...+...+-.+ +|+++|| ++ ||+.++++.++.+ ++....+..++... ..
T Consensus 50 ~~l~~~lg~---s~~~i~~~~sl~~lpw~~K~l-~g~l~D~-~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~ 124 (468)
T TIGR00788 50 PMLTDDLGL---DGARYQRLVGLSSLGWALKPF-AGVMSDT-FPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAA 124 (468)
T ss_pred HHHHHhcCC---CHHHHHHHHHHHHHHHHHHHH-HHHHHHh-cCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHH
Confidence 677788999 999999999999999999666 9999999 88 7888888887763 44344444455444 44
Q ss_pred HHHHHHHhhccccchhhhheeecccCCCchhHHH---HHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHH
Q 009563 186 VLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAG---MSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLL 259 (532)
Q Consensus 186 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~---~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~ 259 (532)
+.+++.+++.+...++..++..|..+ +++.... +......++|.++++.+++.+. +||..|++.+++.++..
T Consensus 125 ~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~- 202 (468)
T TIGR00788 125 AFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL- 202 (468)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH-
Confidence 48899999999999999999999998 5554433 3333444589999999888876 89999999888877764
Q ss_pred HHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcC
Q 009563 260 IILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKS 339 (532)
Q Consensus 260 ~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (532)
+..++++|.+.....+.+.++.... ... . ....+.........+..+++
T Consensus 203 ~~~~~~~E~~~~~~~~~~~~~~~~~-~~~----------------~--------------~~~~~~~~~~~~~l~~~l~~ 251 (468)
T TIGR00788 203 FVSNLSKERRAFVRPRIGTYLEMNM-ALL----------------T--------------LGVLANVKVQILGLRGAIQL 251 (468)
T ss_pred HHHHhcccccccccccccccchhhh-hhh----------------h--------------hhHHHHHHHHHHHHHHHHhc
Confidence 5667778853100000000000000 000 0 00000000111234455677
Q ss_pred hHHHHHHHHHHH-HHHHHHHH---HHHhhhccccCcchHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHH
Q 009563 340 PLTRIRLFLAVT-INFLCSVV---YYGISLNVVNLQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFF 415 (532)
Q Consensus 340 ~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~ 415 (532)
|..+..+...++ ........ ++..+..........+......+++.+++..+.+++.+|++.|+.+.++.++.+++
T Consensus 252 ~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~ 331 (468)
T TIGR00788 252 LEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLS 331 (468)
T ss_pred HHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 766654444433 11111111 01111111112234445555666888889999999999999999998888888877
Q ss_pred HHHHHhhhccc------hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 416 CLLGSLVKNNG------IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 416 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
.+......... ..........++.+++.+..+.....++.+..|++.+|+.+++.+++.++|..+++.+.
T Consensus 332 ~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~g 407 (468)
T TIGR00788 332 SLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLG 407 (468)
T ss_pred HhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHH
Confidence 65543211000 00113444556777777788888899999999999999999999999999999988765
No 104
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.85 E-value=6.1e-18 Score=166.45 Aligned_cols=348 Identities=13% Similarity=0.112 Sum_probs=238.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHH-HHHHHHHHHHHHHHhhc-c-hHHHHHHHHHHHHhhccccchh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSL-TVVCMMNAVFGCLTAFS-P-NYSTYVVLRMLTGFSTGGVGLC 201 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l-~~~~~~~~~~~~~~~~~-~-~~~~l~~~r~l~G~~~~~~~~~ 201 (532)
..+..++..++..+..++..++.|.++|+ -|+||.+ .+...+..+++.+..+. + +++...+.-++.-++.+...+.
T Consensus 68 ~~s~~~~~~sis~l~~all~P~lGa~aD~-~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vf 146 (477)
T PF11700_consen 68 TSSLWLYANSISGLLQALLAPFLGAIADY-GGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVF 146 (477)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 45677899999999999999999999998 6776555 44555555666666664 3 3444444455555677777788
Q ss_pred hhheeecccCCCch--------------------------hHHHHHHHHHHHHHHHHHHHHHHHhh-----------chH
Q 009563 202 AFVLATEPVGPSKR--------------------------GAAGMSTFYFFSTGIALLSGIAYIFQ-----------TWR 244 (532)
Q Consensus 202 ~~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~~~~l~~~l~-----------~wr 244 (532)
..+++.|..+++++ ++..+.-.....+|.++...+...+. +-|
T Consensus 147 yna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r 226 (477)
T PF11700_consen 147 YNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIR 226 (477)
T ss_pred HHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhh
Confidence 88999999999888 89988888888888888777665543 248
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhh
Q 009563 245 ALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELA 324 (532)
Q Consensus 245 ~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (532)
..+.+.++.-++..+..++++||.|+....+..........+++
T Consensus 227 ~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l------------------------------------ 270 (477)
T PF11700_consen 227 VAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRL------------------------------------ 270 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHH------------------------------------
Confidence 88999999988888888889998764211111111111111111
Q ss_pred hhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhccc-cCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 009563 325 TKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVV-NLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLG 400 (532)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~g 400 (532)
...++++.+.|...+.++..+++.-...........+.. .++. +.....+...+.+++|.++.+++.||+|
T Consensus 271 -----~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g 345 (477)
T PF11700_consen 271 -----WRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFG 345 (477)
T ss_pred -----HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 124455555565554444444433333322222222222 3332 3344455666788899999999999999
Q ss_pred Cc--hhHHHHHHHHHHHHHHHHh--hh----ccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHH
Q 009563 401 RK--PMTIGTLWFSGFFCLLGSL--VK----NNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQ 472 (532)
Q Consensus 401 r~--~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 472 (532)
.| +++..+..+..+..+...+ .. ....+ .+++..++.|+..+..++..-++.+|+.|+++.+..+|++..
T Consensus 346 ~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~--~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i 423 (477)
T PF11700_consen 346 PKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPW--EFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAI 423 (477)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHH--HHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHH
Confidence 98 7766666555333333222 11 11122 577788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-----Hhh-hhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 009563 473 AAQLGAILAPFVV-----VLG-GWLPFAVFAACGIIGGLFAFYLPETLNK 516 (532)
Q Consensus 473 ~~~~g~~i~p~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 516 (532)
.+...+++||.+. ..+ ....+....++.+++.++...++..+++
T Consensus 424 ~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g~ 473 (477)
T PF11700_consen 424 TGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKGR 473 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhhh
Confidence 9999999999988 233 5667777778888887777777765544
No 105
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.85 E-value=4.3e-18 Score=162.42 Aligned_cols=320 Identities=17% Similarity=0.158 Sum_probs=234.8
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccC---CCCc-hHHHHHHHHHHHHHHHHHhhcc------hHHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDS---RLGR-KGSLTVVCMMNAVFGCLTAFSP------NYSTY 184 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr---~~Gr-r~~l~~~~~~~~~~~~~~~~~~------~~~~l 184 (532)
..+.+|+ ++..+|.+..+.-+--++..|+.|.+.|| |+|| |+.++++.+..++.++++-.++ +....
T Consensus 39 YTdv~Gi---s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya 115 (467)
T COG2211 39 YTDVFGL---SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYA 115 (467)
T ss_pred HhcccCC---cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHH
Confidence 4567889 99999999999999999999999999997 4888 5677888899999999888776 35567
Q ss_pred HHHHHHHHhhccccchhhhheeecccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhh----------chHHHHHHHHHH
Q 009563 185 VVLRMLTGFSTGGVGLCAFVLATEPVG-PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----------TWRALYIASSIP 253 (532)
Q Consensus 185 ~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----------~wr~~f~~~~~~ 253 (532)
++.-.+.+++.......-.++..|+.+ ++||.+..++-+.+..+|.++...+...+. ||+..-++.+++
T Consensus 116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi 195 (467)
T COG2211 116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVI 195 (467)
T ss_pred HHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Confidence 777888999998888888899999886 588999999999999999776555444332 788888888888
Q ss_pred HHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccch
Q 009563 254 SILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSV 333 (532)
Q Consensus 254 ~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (532)
..+..+.+++-.+|.+.. .+... ...+.+.+..+
T Consensus 196 ~~i~~l~~~~~v~ER~~~--~~~~~--------------------------------------------~~~~~~~~~~~ 229 (467)
T COG2211 196 GVILLLFCFFNVKERVVE--TQPTK--------------------------------------------TGVKLKLKDSF 229 (467)
T ss_pred HHHHHHHHHHHhhcccCc--cccCc--------------------------------------------ccccccHHHHH
Confidence 888877777777764320 00000 00011112244
Q ss_pred hhhhcChHHHHHHHHHHHHHHHH----HHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHH
Q 009563 334 IDVIKSPLTRIRLFLAVTINFLC----SVVYYGISLNVVNLQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTL 409 (532)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~ 409 (532)
..+++|+.++...+..++..... +...|...+.+................+.+++.++..++.+|+|+|++..++.
T Consensus 230 ~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~ 309 (467)
T COG2211 230 LLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGL 309 (467)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHH
Confidence 56788887776655444444333 33334444444444444444555555666777899999999999999999999
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcccccc-------chhhhhHHHHHHHHHHHHHHHHH
Q 009563 410 WFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFP-------TVVRNAALGCATQAAQLGAILAP 482 (532)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~~g~~i~p 482 (532)
++.+++.+++.+.+..... +.++..++.+++.+...+..+++++|... .+..|...|...++..+|.+++.
T Consensus 310 ~~~~i~~~~~~f~~~~~~~--l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~ 387 (467)
T COG2211 310 LLLAVGYLLLYFTPAGSVV--LIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAG 387 (467)
T ss_pred HHHHHHHHHHHhhcCcchH--HHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHH
Confidence 9999999999888744332 55666678889999999999999999865 23457788888888888877766
Q ss_pred HHH
Q 009563 483 FVV 485 (532)
Q Consensus 483 ~~~ 485 (532)
.+.
T Consensus 388 ~~~ 390 (467)
T COG2211 388 FIP 390 (467)
T ss_pred HHH
Confidence 544
No 106
>PRK09848 glucuronide transporter; Provisional
Probab=99.84 E-value=7.6e-18 Score=168.26 Aligned_cols=316 Identities=12% Similarity=0.042 Sum_probs=198.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC----CchHHH-HHHHHHHHHHHHHHh-h----cc--h
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRL----GRKGSL-TVVCMMNAVFGCLTA-F----SP--N 180 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~----Grr~~l-~~~~~~~~~~~~~~~-~----~~--~ 180 (532)
+.+.+.+|+ +..++|.+.+...+..++..++.|+++|| . |||+.. .++.+...+.+++.. . ++ .
T Consensus 33 ~y~~~~~gl---~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (448)
T PRK09848 33 SYYTDVAGV---GAAAAGTMLLLVRVFDAFADVFAGRVVDS-VNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSK 108 (448)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHhhhhheeeeec-CCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchH
Confidence 345677899 99999999999999999999999999998 5 777644 566555555444432 1 11 2
Q ss_pred HHHHHHHHHHHHhhccccchhhhheeecccCC-CchhHHHHHHHHHH-----HHHHHHHHHHHHHhh-----chHHHHHH
Q 009563 181 YSTYVVLRMLTGFSTGGVGLCAFVLATEPVGP-SKRGAAGMSTFYFF-----STGIALLSGIAYIFQ-----TWRALYIA 249 (532)
Q Consensus 181 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~-----~~G~~~~~~l~~~l~-----~wr~~f~~ 249 (532)
...++...++.+++.+...+...++..+..++ ++|.+..+.-..+. .+|..++|.++.... +|.....+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~ 188 (448)
T PRK09848 109 VVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIV 188 (448)
T ss_pred HHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 33345556677888888777777777776654 67888766655433 345555666655431 12222223
Q ss_pred HHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhcc
Q 009563 250 SSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAV 329 (532)
Q Consensus 250 ~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (532)
.+++.++..++.....||++.. +. ++...
T Consensus 189 ~~v~~~~~~~~~~~~~~e~~~~---~~------------------------------------------------~~~~~ 217 (448)
T PRK09848 189 LAIAGMVLYFICFKSTRENVVR---IV------------------------------------------------AQPSL 217 (448)
T ss_pred HHHHHHHHHHHHHcCcEeccCC---Cc------------------------------------------------cCCCH
Confidence 3333333332334444554210 00 00011
Q ss_pred ccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhccccC-cchHHHH---HHHHHHHHHHHHHHHHHHHhhhCCchhH
Q 009563 330 TGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVVNL-QTNLYLN---VLVNAVAEMPAFTITAVLLDKLGRKPMT 405 (532)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~l~d~~gr~~~~ 405 (532)
+..++.+++|+.++...+..++............+++.... +.+.... .....++.+++.++.+++.||+|+|+.+
T Consensus 218 ~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~ 297 (448)
T PRK09848 218 KISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF 297 (448)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 12466788998877665555555544443333444444332 2222111 1222345667888999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccch-------hhhhHHHHHHHHHHHHH
Q 009563 406 IGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTV-------VRNAALGCATQAAQLGA 478 (532)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~r~~~~g~~~~~~~~g~ 478 (532)
..+.++..++.+.+.+.+....+ ..++..++.+++.+...+...++..|..|.+ .+|...|+.+....+|.
T Consensus 298 ~~g~~~~~i~~~~~~~~~~~~~~--~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~ 375 (448)
T PRK09848 298 LIGALLGTCGYLLFFWVSVWSLP--VALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQ 375 (448)
T ss_pred HHHHHHHHHHHHHHHHcCchhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHH
Confidence 99988887777666654332222 3445566778888888888888988888653 35888999999999998
Q ss_pred HHHHHHH
Q 009563 479 ILAPFVV 485 (532)
Q Consensus 479 ~i~p~~~ 485 (532)
.+++.+.
T Consensus 376 aig~~i~ 382 (448)
T PRK09848 376 AIGGSIP 382 (448)
T ss_pred HHHHHHH
Confidence 8887766
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.83 E-value=8.3e-19 Score=173.99 Aligned_cols=318 Identities=19% Similarity=0.173 Sum_probs=235.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcc----CCCCchH-HHHHHHHHHHHHHHHHhhc-c-------
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSD----SRLGRKG-SLTVVCMMNAVFGCLTAFS-P------- 179 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~d----r~~Grr~-~l~~~~~~~~~~~~~~~~~-~------- 179 (532)
+...+.+|+ ++...|++..+..+-.++..|+.|.++| | +|||| .+++|.++.+++.++.... +
T Consensus 26 ~f~~~~~gl---~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 26 YFYTDVLGL---SPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 445567799 9999999999999999999999999999 6 89765 5567888888888887766 4
Q ss_pred hHHHHHHHHHHHHhhccccchhhhheeecccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhh----------chHHHHH
Q 009563 180 NYSTYVVLRMLTGFSTGGVGLCAFVLATEPVG-PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----------TWRALYI 248 (532)
Q Consensus 180 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----------~wr~~f~ 248 (532)
...++.+..++..++.......-.++..|..+ +++|.+..+.-..+..+|.++...+...+. +|++..+
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 23456777788899999998888999999998 478999999998888888865555544432 5999999
Q ss_pred HHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhc
Q 009563 249 ASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEA 328 (532)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (532)
+.+++.++..++..+..+|.++ +.+ +++++.+
T Consensus 182 v~~iv~~v~~~i~~~~~ke~~~------~~~------------------------------------------~~~~~~~ 213 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKERSV------EVT------------------------------------------EQEKKIS 213 (428)
T ss_pred HHHHHHHHHhhhhhheeeeccc------ccc------------------------------------------ccccccc
Confidence 9999988888777888887211 000 0001112
Q ss_pred cccchhhhhcChHHHHHHHHHHHHHHHHHH----HHHHhhhccccCcchHHHHHHHHHHHHHHHHHHHHHHHhhhCCchh
Q 009563 329 VTGSVIDVIKSPLTRIRLFLAVTINFLCSV----VYYGISLNVVNLQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPM 404 (532)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~ 404 (532)
.+..++++++||.++..+...++.++.... ..|......... ...........+..+++.++.++++||+|+|+.
T Consensus 214 ~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~ 292 (428)
T PF13347_consen 214 LRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV 292 (428)
T ss_pred cccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee
Confidence 334677888898877666665555544332 223333333222 222333345567778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccc-------hhhhhHHHHHHHHHHHH
Q 009563 405 TIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPT-------VVRNAALGCATQAAQLG 477 (532)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~r~~~~g~~~~~~~~g 477 (532)
+..+..+.+++.+.+.+....+.+ ..++..++.+++.+..+...+++.+|..+. +..|...|+.+....++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~ 370 (428)
T PF13347_consen 293 YIIGLLLAALGFLLLFFLGPGSPW--LVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIG 370 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhHH--HHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHH
Confidence 999999999998888887633322 577788888999999999999999999863 33588888888888888
Q ss_pred HHHHHHHH
Q 009563 478 AILAPFVV 485 (532)
Q Consensus 478 ~~i~p~~~ 485 (532)
..+++.+.
T Consensus 371 ~~la~~i~ 378 (428)
T PF13347_consen 371 QGLAGAIV 378 (428)
T ss_pred HHHHHHHH
Confidence 77776655
No 108
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.83 E-value=2e-19 Score=155.21 Aligned_cols=362 Identities=12% Similarity=0.015 Sum_probs=219.5
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh---cchHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF---SPNYSTYVVLRM 189 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~ 189 (532)
.+...|.++ +..+..++.+.|.....+-+++.|++.||++|-|..-++-++...++.++++. .+.+|+++++||
T Consensus 68 ~~fk~d~ni---~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF 144 (459)
T KOG4686|consen 68 IDFKLDSNI---EYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRF 144 (459)
T ss_pred hhhhccccc---ceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhhe
Confidence 355566666 67788999999999999999999999999899998877777777888777764 589999999999
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHH------HHHHHHHHHHHHHhc
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQTWRALYI------ASSIPSILFLLIILP 263 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~wr~~f~------~~~~~~~~~~~~~~~ 263 (532)
+.|+|.-...++-..|+.-|+..|+.+.++|+.....-+|..+-..+.+++.+.-..++ ..++...+.. .
T Consensus 145 ~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~----~ 220 (459)
T KOG4686|consen 145 LFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEV----K 220 (459)
T ss_pred eeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHH----H
Confidence 99999888888889999999999999999999999998888765555544431111111 0011100000 0
Q ss_pred ccccCchhHhhcC-CHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHH
Q 009563 264 FLPESPRWYLVRG-KLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLT 342 (532)
Q Consensus 264 ~~~esp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (532)
....+-......+ ..+++++.+++- ++. ..+ .++-.-...++. .+
T Consensus 221 tc~~slical~lg~~D~rAerilh~e---~g~-~Ge-----------------------------~pkLtdv~~f~p-pf 266 (459)
T KOG4686|consen 221 TCKQSLICALSLGLSDDRAERILHLE---EGF-LGE-----------------------------EPKLTDVNTFYP-PF 266 (459)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHhhh---cCc-ccC-----------------------------CcccccccccCc-cH
Confidence 0000000000111 112222221111 000 000 000011112333 35
Q ss_pred HHHHHHHHHHHHHHHHHH-HHhhhccccCcchHHHH---HHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHH
Q 009563 343 RIRLFLAVTINFLCSVVY-YGISLNVVNLQTNLYLN---VLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLL 418 (532)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~ 418 (532)
|....++..++....-.+ .+..++...++.+.... ....-..+.+.+.+.|.++||+|++...+.+..+..+..-.
T Consensus 267 w~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~ 346 (459)
T KOG4686|consen 267 WVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHS 346 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhh
Confidence 554444444444332221 22233333344332221 22222345567788999999999998777665555444333
Q ss_pred HHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHHH---------hhh
Q 009563 419 GSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVV---------LGG 489 (532)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~~---------~~~ 489 (532)
..+..... .++.+.+.|......-...|..++.+.|++..|++.|+.+.+.++|-.+.|++.. ...
T Consensus 347 ~l~Ft~ls-----Py~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~l 421 (459)
T KOG4686|consen 347 GLFFTFLS-----PYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNL 421 (459)
T ss_pred hHHhhhcc-----HHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhH
Confidence 33333332 2355666677666666667888888999999999999999999999999998881 112
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCCCCChhh
Q 009563 490 WLPFAVFAACGIIGGLFAFYLPETLNKPLYD 520 (532)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 520 (532)
...|+..+.+.+....+.+++.++++-.++.
T Consensus 422 e~ffl~~~~~aL~svgil~~~N~kq~gnLN~ 452 (459)
T KOG4686|consen 422 EAFFLIIGLMALTSVGILFYLNKKQSGNLNR 452 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhheeccccCCCCC
Confidence 3345555555666655556665544444443
No 109
>PRK11462 putative transporter; Provisional
Probab=99.83 E-value=4.4e-17 Score=162.17 Aligned_cols=314 Identities=11% Similarity=0.030 Sum_probs=198.2
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccC---CCCch-HHHHHHHHHHHHHHHHHhhcch------HHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDS---RLGRK-GSLTVVCMMNAVFGCLTAFSPN------YSTY 184 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr---~~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~l 184 (532)
..+..|+ ++..+|.+..+.-+--++..|+.|.++|| |+||| +.++++.+..+++.+++...++ ...+
T Consensus 36 yt~~~Gl---~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~ 112 (460)
T PRK11462 36 YTDIFGI---PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYA 112 (460)
T ss_pred HHHhhCC---CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 3467889 99999999999999999999999999996 47986 5566677788887776654442 4456
Q ss_pred HHHHHHHHhhccccchhhhheeecccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhh----------chHHHHHHHHHH
Q 009563 185 VVLRMLTGFSTGGVGLCAFVLATEPVG-PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----------TWRALYIASSIP 253 (532)
Q Consensus 185 ~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----------~wr~~f~~~~~~ 253 (532)
++.-++..++.......-.++..|..+ ++||++..++...+..+|..+++.+...+. +|+....+.+++
T Consensus 113 ~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii 192 (460)
T PRK11462 113 AITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVV 192 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 666777788888888778888899887 689999999999999988877766543322 577777777776
Q ss_pred HHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccch
Q 009563 254 SILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSV 333 (532)
Q Consensus 254 ~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (532)
.++...+++...+|.++. ++ ++.+.+..+
T Consensus 193 ~~i~~~i~~~~~kE~~~~----~~-----------------------------------------------~~~~~~~~l 221 (460)
T PRK11462 193 AFMMLAFCFFTTKERVEA----PP-----------------------------------------------TTTSMREDL 221 (460)
T ss_pred HHHHHHHHHhcceeccCC----Cc-----------------------------------------------cCCCHHHHH
Confidence 666554555545553210 00 000011245
Q ss_pred hhhhcChHHHHHHHHHHHHHHH----HHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHH
Q 009563 334 IDVIKSPLTRIRLFLAVTINFL----CSVVYYGISLNVVNLQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTL 409 (532)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~ 409 (532)
+..++|+.++......++.... .....|...+.... ............+..+++.++++++.||+++|+.+..+.
T Consensus 222 ~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~ 300 (460)
T PRK11462 222 RDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTN 300 (460)
T ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 6677887765544333333222 12222333333322 111122334445677788899999999999998876555
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcccccc-------chhhhhHHHHHHHHHHHHHHHHH
Q 009563 410 WFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFP-------TVVRNAALGCATQAAQLGAILAP 482 (532)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~~g~~i~p 482 (532)
.+..+..+++.+.+..... ..++..++.+++.+...+..+++..|..+ .+..|...+.......+|..+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~ 378 (460)
T PRK11462 301 ALLAVISLAMFFVPMQASI--TMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGG 378 (460)
T ss_pred HHHHHHHHHHHHhchhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 4444433333333322221 22334445566666666666777777765 23334555666677777777766
Q ss_pred HHH
Q 009563 483 FVV 485 (532)
Q Consensus 483 ~~~ 485 (532)
.+.
T Consensus 379 ~i~ 381 (460)
T PRK11462 379 ALI 381 (460)
T ss_pred HHH
Confidence 554
No 110
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=2.8e-18 Score=158.97 Aligned_cols=377 Identities=12% Similarity=0.050 Sum_probs=243.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhh
Q 009563 48 EFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKY 127 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~ 127 (532)
+.-++||.+++++++..+.+++....++.. . ......++ +..
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i--------~--------------------------n~~~~~Yg----s~~ 79 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPI--------N--------------------------NYVNSFYG----SSS 79 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhH--------H--------------------------HHHHHHhc----chH
Confidence 456778888888888877777665544444 1 12223333 455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc------hHH--HHHHHHHHHHhhccccc
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP------NYS--TYVVLRMLTGFSTGGVG 199 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~~~~~ 199 (532)
..-|+.-+|++.+....+++-|+.|+ +|-|...+++..+.++|+.+-..+. .++ ....+..+.+.+.-...
T Consensus 80 ~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim 158 (480)
T KOG2563|consen 80 AADWLSMIYMVVSVPFGFAAMWILDK-FGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFIL 158 (480)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhh
Confidence 67799999999999999999999999 9999999999999999998877652 344 67788889888887777
Q ss_pred hhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---------chHH--HHHHHHHHHHHHHHHHhcccccC
Q 009563 200 LCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---------TWRA--LYIASSIPSILFLLIILPFLPES 268 (532)
Q Consensus 200 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---------~wr~--~f~~~~~~~~~~~~~~~~~~~es 268 (532)
.....+..-|++++||..+..+-.++..+|.+++.++...+. .|-. .|+..+++..+.+++..+..++.
T Consensus 159 ~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~ 238 (480)
T KOG2563|consen 159 GLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKK 238 (480)
T ss_pred ccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 666677777999999999999999999999999888877765 4544 35544444444444445555554
Q ss_pred chhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHH
Q 009563 269 PRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFL 348 (532)
Q Consensus 269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (532)
|+...... .+ ..+......+.++.++++.+....+.
T Consensus 239 P~tPps~s---~~-----------------------------------------~~~~~~f~~si~~~~~n~~F~il~~~ 274 (480)
T KOG2563|consen 239 PPTPPSAS---QA-----------------------------------------ALQDASFPKSIKSCFKNRQFIILAIC 274 (480)
T ss_pred CCCCCchh---Hh-----------------------------------------hhhcCcHHHHHHHHHcCccHHHHHHH
Confidence 43110000 00 00001223467888999865543333
Q ss_pred HHHHHHHHHHHHHHhhhccc------cC-cchHHHHHHHHHHHHHHHHHHHHHHHhhhCCch-hHHHHHHHHHHHHHHHH
Q 009563 349 AVTINFLCSVVYYGISLNVV------NL-QTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKP-MTIGTLWFSGFFCLLGS 420 (532)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~-~~~~~~~~~~~~~~~~~ 420 (532)
... ....++..+..+. .+ +...+.......+.++++.++.|.+.||.+.-+ ..+.......++.+.+.
T Consensus 275 ygi----~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~ 350 (480)
T KOG2563|consen 275 YGI----GLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLL 350 (480)
T ss_pred Hhh----hHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 332 2233333332222 11 223445556666778899999999999987644 34444444444422222
Q ss_pred -hhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh----hh
Q 009563 421 -LVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLG----GW 490 (532)
Q Consensus 421 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~----~~ 490 (532)
........+ +.+....+.+++..+..|+..-+..|..-|..-++..|+.+..+++-+++-.++. ..+ ..
T Consensus 351 ~~t~~~~~~v-iv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~ 429 (480)
T KOG2563|consen 351 TCTLFLGDSV-IVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTF 429 (480)
T ss_pred HhhccCCceE-ehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCc
Confidence 222222222 4566667778888888899999999987666678999999998888777766666 122 22
Q ss_pred hHHHHHHHHHHHHHHHHhhccC
Q 009563 491 LPFAVFAACGIIGGLFAFYLPE 512 (532)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~l~~ 512 (532)
..-+......++..++..++++
T Consensus 430 ~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 430 PANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred cchhHhHHHHHHHHHHHhhhhh
Confidence 2234444555555555555544
No 111
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.82 E-value=1.5e-17 Score=157.37 Aligned_cols=347 Identities=16% Similarity=0.141 Sum_probs=213.1
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHH--HHH-HHHhhc----chH-HHHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNA--VFG-CLTAFS----PNY-STYVV 186 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~--~~~-~~~~~~----~~~-~~l~~ 186 (532)
+.++.|+ |..++|.+.++..+...+.+++.|.++|| +|.||-++....+.. .+. +...+. .|. ...++
T Consensus 34 L~~~~GL---s~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-lg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~ii 109 (412)
T PF01306_consen 34 LTQVAGL---SGTEIGIIFSAGSLFALLAQPVYGFISDK-LGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAII 109 (412)
T ss_dssp HHHHH------HHHHHHHHHHHHHHHHHTHHHHHHHHHH-CTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHH
T ss_pred HccccCC---CHHHHHHHHHHHHHHHHHHHHhHHHhcch-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445899 99999999999999999999999999999 997776554433221 122 222222 222 22333
Q ss_pred HHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHhcc
Q 009563 187 LRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 187 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
+-+..|+......++.-+++.++. ++.+.-.|-.-+..++|.+++..++|.+. +-+..||+....+++..++.++.
T Consensus 110 g~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~ 187 (412)
T PF01306_consen 110 GGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLL 187 (412)
T ss_dssp TTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHc
Confidence 334445545555565656655554 33445556677788888888888888776 56778888777766666455555
Q ss_pred cccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHH
Q 009563 265 LPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRI 344 (532)
Q Consensus 265 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (532)
.|+.++.....+.. . .++++...++..+++|+|++|.
T Consensus 188 ~~~~~~~~~~~~~~-----------------------------------~--------~~~~~~~~~~~~~l~k~~~fw~ 224 (412)
T PF01306_consen 188 KPDVPPQAEVADAL-----------------------------------G--------AKKDKVSLKDVLSLFKMRNFWF 224 (412)
T ss_dssp ---SSSSS-SSTTS-----------------------------------S--------S------HHHHHHHTTSHHHHH
T ss_pred CCcCchhhhhhccc-----------------------------------c--------cCCCCCcHHHHHHHhcchhHHH
Confidence 44433210000000 0 0000011124568889998887
Q ss_pred HHHHHHHHHHHHHHH-----HHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHH
Q 009563 345 RLFLAVTINFLCSVV-----YYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFC 416 (532)
Q Consensus 345 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~ 416 (532)
..+............ .|...++ ++.+.. .+.......+.+++...+..++.+|+|.|+.++++..++.+-.
T Consensus 225 ~~l~v~g~~~~Y~vfdqqf~~y~~~~f-~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi 303 (412)
T PF01306_consen 225 FVLFVIGVAAIYDVFDQQFPIYFASFF-QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRI 303 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHH
Confidence 655544443332222 1222222 221111 1222334446677888899999999999999999999999998
Q ss_pred HHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHH-HHHHHHHHHHHHHHH-----Hhhhh
Q 009563 417 LLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCA-TQAAQLGAILAPFVV-----VLGGW 490 (532)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~-~~~~~~g~~i~p~~~-----~~~~~ 490 (532)
.+.++.++.. ...+.-.+.++-.........-|+.+.+|++..++...+. +...++|.++.+.+. ..|..
T Consensus 304 ~~~~~~~~~~----~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~ 379 (412)
T PF01306_consen 304 IGSGFATNPW----VISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQ 379 (412)
T ss_dssp HHHHT--SHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhcchH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcH
Confidence 8888776654 5667777888888888888999999999999988888886 455677777665555 56677
Q ss_pred hHHHHHHHHHHHHHHHH-hhccCCCC
Q 009563 491 LPFAVFAACGIIGGLFA-FYLPETLN 515 (532)
Q Consensus 491 ~~~~~~~~~~~~~~~~~-~~l~~~~~ 515 (532)
.+|++.+++.+...++. +.++++++
T Consensus 380 ~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 380 HTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHHHHHHHheeeecCCCc
Confidence 78888888777666555 45554433
No 112
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.81 E-value=3.3e-16 Score=153.83 Aligned_cols=351 Identities=12% Similarity=-0.040 Sum_probs=200.1
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC-CchHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRL-GRKGSLTVVCMMNAVFGCLTAFSP-NYSTYVVLRMLT 191 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~ 191 (532)
.+.+++|+ +..+.+.+.+.+.....++.+++|+++|| + |||++++++.++.+++.++.+..+ +...+.++..+.
T Consensus 35 yL~~~lgl---s~~~a~~i~~~~~~~~~l~~ligG~LaDR-ilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li 110 (493)
T PRK15462 35 YLTNQLKY---DDNHAYELFSAYCSLVYVTPILGGFLADK-VLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAII 110 (493)
T ss_pred HHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Confidence 34567899 99999999999999999999999999999 8 999999999999999987776543 223344445555
Q ss_pred HhhccccchhhhheeecccCCC--chhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 192 GFSTGGVGLCAFVLATEPVGPS--KRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
++|.|...+...++++|.+|++ +|...+++...+.++|..++|.+.+++. ||++.|.+.++..++.. +.+++.+
T Consensus 111 ~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~l-i~~~~~~ 189 (493)
T PRK15462 111 VCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGL-VIFLCGN 189 (493)
T ss_pred HHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHH-HHHHHhh
Confidence 5667777777788999999875 6899999999999999999999999986 99999998765444333 3322211
Q ss_pred cCc-hh--HhhcCCHHHHHH--H------HH----HHHHHhCCCCCccccccchhhhhhhhhc--C-c-cchhhhhhhhh
Q 009563 267 ESP-RW--YLVRGKLNEAMK--I------MR----AIAKSNGRHLPDGVVLMLDDEQENDASN--G-K-QNYKEELATKE 327 (532)
Q Consensus 267 esp-~~--~~~~~~~~~~~~--~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-~~~~~~~~~~~ 327 (532)
+.. +. ...+...++... . .. .+.... ..++....... . . -.+--.....
T Consensus 190 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~- 257 (493)
T PRK15462 190 RHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVL-----------FWKEWSVYALIVATIIGLGVLAKIYRK- 257 (493)
T ss_pred hhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 110 00 000000000000 0 00 000000 00000000000 0 0 0000000000
Q ss_pred ccccchhhhhcChH--HHHHHHHHHHHHHHHHHHHHHhhhcccc--------CcchHHHHHHHHHHHHHHHHHHHHHHHh
Q 009563 328 AVTGSVIDVIKSPL--TRIRLFLAVTINFLCSVVYYGISLNVVN--------LQTNLYLNVLVNAVAEMPAFTITAVLLD 397 (532)
Q Consensus 328 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~d 397 (532)
+ .+ +.-|++. ....++...+++.........+.++..+ ..........+..+..++..++.+++-.
T Consensus 258 ~--~~--~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~ 333 (493)
T PRK15462 258 A--EN--QKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVK 333 (493)
T ss_pred c--CC--HHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHH
Confidence 0 00 0001110 0111111112222211111122221111 1112233334455555556666666655
Q ss_pred hhCC--ch-----hHHHHHHHHHHHHHHHHhhh---c--cchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhh
Q 009563 398 KLGR--KP-----MTIGTLWFSGFFCLLGSLVK---N--NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNA 465 (532)
Q Consensus 398 ~~gr--~~-----~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~ 465 (532)
|..| |. -+.++.++.+++++++.+.. + .....++.+...++..++.-...|+..+.++++.|++.++.
T Consensus 334 ~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~ 413 (493)
T PRK15462 334 ESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGV 413 (493)
T ss_pred HHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHH
Confidence 6532 21 25677777777776665421 1 11122256677788899999999999999999999999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHH
Q 009563 466 ALGCATQAA-QLGAILAPFVV 485 (532)
Q Consensus 466 ~~g~~~~~~-~~g~~i~p~~~ 485 (532)
.+|+..... .+|..++..+.
T Consensus 414 ~mg~w~l~~~~~~~~~~g~~~ 434 (493)
T PRK15462 414 LTGIYMLLSGAIANYLAGVIA 434 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999986643 56666665554
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=4.5e-16 Score=143.82 Aligned_cols=345 Identities=13% Similarity=0.092 Sum_probs=240.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchH-HHHHHHHHHHHHHHHHhhcch---HHHHHHHHHHHHhhccccch
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKG-SLTVVCMMNAVFGCLTAFSPN---YSTYVVLRMLTGFSTGGVGL 200 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~-~l~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~ 200 (532)
+.+..+...++..+..++-++..|.++|+ .|+|| .+-....+..++.++..++++ ++..++...+..++.....+
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~-~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~V 134 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADY-PGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNV 134 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhcc-CCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhe
Confidence 56788999999999999999999999998 78765 455555556666666666654 44556667788888888888
Q ss_pred hhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---------------------chHHHHHHHHHHHHHHHH
Q 009563 201 CAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---------------------TWRALYIASSIPSILFLL 259 (532)
Q Consensus 201 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---------------------~wr~~f~~~~~~~~~~~~ 259 (532)
.-.+++.+..++++-++..++-.....+|..+..++..... .-|..+.+.++..++..+
T Consensus 135 fyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~i 214 (438)
T COG2270 135 FYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFAL 214 (438)
T ss_pred ehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHh
Confidence 88999999999988888877766666666655444321110 468888999999888888
Q ss_pred HHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcC
Q 009563 260 IILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKS 339 (532)
Q Consensus 260 ~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (532)
..++..++.++.. .+.....++..+++ +.+++++.++
T Consensus 215 Pm~~~v~~~~~~~--~~~~~~l~~g~k~L-----------------------------------------~~t~k~i~~~ 251 (438)
T COG2270 215 PMILNVHDAEKIS--SPPPTALRNGFKEL-----------------------------------------KSTFKEIRGR 251 (438)
T ss_pred HHHhccccccccc--ccchHHHHHHHHHH-----------------------------------------HHHHHHHhcc
Confidence 8888888765310 00001111111111 1245566666
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHHhhhccccCc---chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHH
Q 009563 340 PLTRIRLFLAVTINFLC-SVVYYGISLNVVNLQ---TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFF 415 (532)
Q Consensus 340 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~ 415 (532)
+...+.++..+++.=.. .....+..+....++ .+.........+..++|+++.|++.+|+|.|+++..+.++..+.
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIA 331 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHH
Confidence 65544444444333222 222222222222233 34445556667788899999999999999999999998888888
Q ss_pred HHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh-h
Q 009563 416 CLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLG-G 489 (532)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~-~ 489 (532)
++...+..... .++++..+.++..+..++..-++..+++|+++.+..+|+++..+....+++|++. .++ .
T Consensus 332 ~~~~~~~~~~~----~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~ 407 (438)
T COG2270 332 ALYLIFLEGEL----DFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSS 407 (438)
T ss_pred HHHHHHccccH----HHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcch
Confidence 87777766543 4667778889999999999999999999999999999999999999999999998 122 3
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCCCCC
Q 009563 490 WLPFAVFAACGIIGGLFAFYLPETLNKP 517 (532)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 517 (532)
...+.....+.+++.+..+.+|+.++++
T Consensus 408 r~g~~~i~vll~iGl~~L~~v~~~~~~~ 435 (438)
T COG2270 408 RAGVLSIIVLLLIGLLLLLRVKVPGRRE 435 (438)
T ss_pred hhHHHHHHHHHHhhHhhEEeecCCCCcc
Confidence 4455666666666666666777654443
No 114
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.75 E-value=7.9e-16 Score=144.67 Aligned_cols=253 Identities=8% Similarity=-0.051 Sum_probs=167.9
Q ss_pred hcchHHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---------------
Q 009563 177 FSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--------------- 241 (532)
Q Consensus 177 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--------------- 241 (532)
..++|+.++++-++.|.|.+...+....++.+..+++++.+.+++.+.+.++|..++|.+++.+.
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 45789999999999999999999999999999999999999999999999999999999988544
Q ss_pred ----chHHHHHHHHHHHHHHHHHH-hcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCc
Q 009563 242 ----TWRALYIASSIPSILFLLII-LPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGK 316 (532)
Q Consensus 242 ----~wr~~f~~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (532)
+|+++|++.+.+.++..++. +..+||.++ +.++ +. ..+
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~----------------------------~~---~~~ 128 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA----------------------------RV---SSG 128 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc----------------------------cc---ccc
Confidence 58999997766655544222 222343210 0000 00 000
Q ss_pred cchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhcccc---Ccc---hHHHHHHHHHHHHHHHHH
Q 009563 317 QNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVVN---LQT---NLYLNVLVNAVAEMPAFT 390 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~ 390 (532)
+. ...++.+++|..+...+..+++...........+.++.+ .+. ...........+.++|++
T Consensus 129 ~~------------~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~ 196 (310)
T TIGR01272 129 DT------------TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRF 196 (310)
T ss_pred cc------------cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 011234455555544333333332322222222333321 122 223334555567789999
Q ss_pred HHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHH
Q 009563 391 ITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCA 470 (532)
Q Consensus 391 ~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 470 (532)
+++++.||+++|+.+.++..+..++.++...... . .......+.+++.+..+|...+...+..|++ .+++.++.
T Consensus 197 ~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~--~---~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~ 270 (310)
T TIGR01272 197 IGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHG--Y---VAMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL 270 (310)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC--H---HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH
Confidence 9999999999999888887777776655544332 1 2234555788999999999999999988764 46666765
Q ss_pred HHHHHHHHHHHHHHH
Q 009563 471 TQAAQLGAILAPFVV 485 (532)
Q Consensus 471 ~~~~~~g~~i~p~~~ 485 (532)
..+.+|+++.|.+.
T Consensus 271 -~~~~~Gg~i~P~l~ 284 (310)
T TIGR01272 271 -CLAIVGGAIVPLLQ 284 (310)
T ss_pred -HHHHhcchHHHHHH
Confidence 56778999999866
No 115
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.67 E-value=1.5e-15 Score=145.48 Aligned_cols=148 Identities=26% Similarity=0.219 Sum_probs=124.8
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-hHHHHHHHHHHHHHHHHH-hhc---c-hHHHHHHHHHHH
Q 009563 118 QWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGR-KGSLTVVCMMNAVFGCLT-AFS---P-NYSTYVVLRMLT 191 (532)
Q Consensus 118 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Gr-r~~l~~~~~~~~~~~~~~-~~~---~-~~~~l~~~r~l~ 191 (532)
|.+. +.+..|++.++..+|.+++++..|++..| .|. |+.++.|.++..++.++. ++. + ..+.++++|++.
T Consensus 65 D~~A---~~~ffG~viaa~slg~~i~~liF~~Ws~k-~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~ 140 (488)
T KOG2325|consen 65 DPTA---TATFFGLVIAASSLGHAIFSLIFGIWSNK-TGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILT 140 (488)
T ss_pred CCCC---CcchhhHHHHHHHHHHHhcchhhcccccc-cCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHc
Confidence 4555 77889999999999999999999999999 676 888999999999999888 332 3 678999999999
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----c-----------hHHHHHHHHHHHH
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ-----T-----------WRALYIASSIPSI 255 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-----~-----------wr~~f~~~~~~~~ 255 (532)
|+|.|. .....+|+++-...++|.++++....+..+|.++||.++..+. | +..+-|+.+++.+
T Consensus 141 Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i 219 (488)
T KOG2325|consen 141 GVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWI 219 (488)
T ss_pred CcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHH
Confidence 998765 5567889999888999999999999999999999998887765 2 2346678888888
Q ss_pred HHHHHHhcccccCch
Q 009563 256 LFLLIILPFLPESPR 270 (532)
Q Consensus 256 ~~~~~~~~~~~esp~ 270 (532)
+.+++..++++|.++
T Consensus 220 ~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 220 IYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHHhheeeccc
Confidence 888788888888754
No 116
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.64 E-value=9.3e-13 Score=122.55 Aligned_cols=314 Identities=14% Similarity=0.060 Sum_probs=204.1
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCC-----ch-HHHHHHHHHHHHHHHHHhhc-----c---
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLG-----RK-GSLTVVCMMNAVFGCLTAFS-----P--- 179 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~G-----rr-~~l~~~~~~~~~~~~~~~~~-----~--- 179 (532)
.+..|+++ .....+.+.+..++..- ..+.+|+.+|+ .+ || +.+..|.++...+..+..++ .
T Consensus 5 VMIvEL~v---pA~lv~~lval~~~~ap-~R~~~G~~SD~-~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~ 79 (403)
T PF03209_consen 5 VMIVELGV---PAWLVALLVALHYLVAP-LRVWFGHRSDT-HPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQ 79 (403)
T ss_pred hHHHHhcc---HHHHHHHHHHHHHHHHH-HHHHhcccccc-CcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 46678999 88999998888877654 69999999998 78 66 45566666666666555442 2
Q ss_pred ----hH----HHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHH--
Q 009563 180 ----NY----STYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRA-- 245 (532)
Q Consensus 180 ----~~----~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~-- 245 (532)
+. ....+...+.|+|.+...+...+++.|..|+++|+++.++.....-+|.+++..+.+.+. .-|.
T Consensus 80 ~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~ 159 (403)
T PF03209_consen 80 QSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQ 159 (403)
T ss_pred ccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHH
Confidence 11 234556778899999999999999999999999999999999999999999999888765 2222
Q ss_pred HHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhh
Q 009563 246 LYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELAT 325 (532)
Q Consensus 246 ~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (532)
.+...+++.++.. +...+-.|.++.... ....++
T Consensus 160 v~~~~a~i~~~l~-~ia~wg~E~r~~~~~---------------------------------------------~~~~~~ 193 (403)
T PF03209_consen 160 VIQGVALIALLLN-LIALWGQEPRRSRRA---------------------------------------------AAAERP 193 (403)
T ss_pred HHHHHHHHHHHHH-HHHHHhcccCCcccc---------------------------------------------cCCCCC
Confidence 2222233333322 222222332110000 000000
Q ss_pred hhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHHHhhhccccC-----cc---hHHHHHHHHHHHHHHHHHHHHHHHh
Q 009563 326 KEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVVNL-----QT---NLYLNVLVNAVAEMPAFTITAVLLD 397 (532)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~l~d 397 (532)
+......++++..+|..++.+...++..+..+ .....++-+ +. +........+.+.++|..+.+++..
T Consensus 194 ~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~----~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~ 269 (403)
T PF03209_consen 194 RPPFREAWRQVWASPQARRFFVFLFLGTLAFF----MQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLS 269 (403)
T ss_pred CccHHHHHHHHHhCCChhHHHHHHHHHHHHHH----hhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11122355666777776665555444443332 222222222 22 2233345566778888888888776
Q ss_pred -hhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHH
Q 009563 398 -KLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQL 476 (532)
Q Consensus 398 -~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~ 476 (532)
|.++++...++..+..+++.++.+.......+ .+....++.|++.+.......+...+...++..|..+|.-...+.+
T Consensus 270 ~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~-~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~ 348 (403)
T PF03209_consen 270 RRLGKKRTAALGCLLGALAFALIILAGPLGSPW-LFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAI 348 (403)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHhcccch-HHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHH
Confidence 57778887888888887777766654333222 6777888899998888888888889999888889988887776654
Q ss_pred HHHHHHH
Q 009563 477 GAILAPF 483 (532)
Q Consensus 477 g~~i~p~ 483 (532)
...++..
T Consensus 349 A~Glg~~ 355 (403)
T PF03209_consen 349 ARGLGTF 355 (403)
T ss_pred HHHHHHH
Confidence 4443333
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.63 E-value=2e-13 Score=129.38 Aligned_cols=380 Identities=14% Similarity=0.041 Sum_probs=222.5
Q ss_pred eecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc--hHHHHHHHHHHHHh
Q 009563 116 VTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP--NYSTYVVLRMLTGF 193 (532)
Q Consensus 116 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~ 193 (532)
.+.+|+ ++++..-+.++|.--.-+..+++|+++||.+|+|+++..|.++..+|.++.+.+. +...++++-++.++
T Consensus 53 ~~gLg~---~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~i 129 (498)
T COG3104 53 GDGLGF---DETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIV 129 (498)
T ss_pred cccCCc---ChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHh
Confidence 334668 8888888888888888889999999999989999999999999999999999884 78899999999999
Q ss_pred hccccchhhhheeecccCCC--chhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhccccc-
Q 009563 194 STGGVGLCAFVLATEPVGPS--KRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPE- 267 (532)
Q Consensus 194 ~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~e- 267 (532)
|.|..-+....++.|.+|++ +|-..++++.++.++|..++|.+.+++. ||...|.+.++-..+.+ +.+...+.
T Consensus 130 G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl-~~f~~~~r~ 208 (498)
T COG3104 130 GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGL-VIFLLGRRH 208 (498)
T ss_pred ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH-HHHHHccch
Confidence 99999999999999999864 3677788999999999999999999987 99999988877666655 33333321
Q ss_pred ---CchhHhhcC-CHHHHH----HHHHHHHHHhCCCCCccccccchhhhhhhhhcCc---cchhhhhhhhhccccchhhh
Q 009563 268 ---SPRWYLVRG-KLNEAM----KIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGK---QNYKEELATKEAVTGSVIDV 336 (532)
Q Consensus 268 ---sp~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 336 (532)
++.....+. +..+.. .....+.... .-.....+.-....... .......+..+.++ ...+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~e- 279 (498)
T COG3104 209 VKGIGGVPDPNPLSFNFLLPVLGGLVVMILAAL-------LTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPK-VFDE- 279 (498)
T ss_pred hcCCCCCCCccchhhhhhhhhHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cHHH-
Confidence 110000000 011111 0000000000 00000000000000000 00000000000000 0000
Q ss_pred hcCh--HHHHHHHHHHHHHHH-----HHHHHHHhhhcccc---CcchHHHHHHHHHHHHHHHHHHHHHHHhhhCCc----
Q 009563 337 IKSP--LTRIRLFLAVTINFL-----CSVVYYGISLNVVN---LQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRK---- 402 (532)
Q Consensus 337 ~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~---- 402 (532)
|++ .....++...++|.. .+...|.......+ ........-....+.-++..++..++..|.+++
T Consensus 280 -r~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~p 358 (498)
T COG3104 280 -RRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQP 358 (498)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCC
Confidence 001 011112222222222 12222332222222 112233333444455555666666666664332
Q ss_pred ---hhHHHHHHHHHHHHHHHHhh---h---ccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHH
Q 009563 403 ---PMTIGTLWFSGFFCLLGSLV---K---NNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQA 473 (532)
Q Consensus 403 ---~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 473 (532)
.-+.++..++..+.+++... . ....+.++.+...++..++.-...|+..+++....|+...+..++.....
T Consensus 359 s~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt 438 (498)
T COG3104 359 STPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLT 438 (498)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 12345555555555555544 1 11122236677788889999999999999999999999999999888777
Q ss_pred HHHHHHHHHHHH-----------HhhhhhHHHHHHHHHHHHHHHHhh
Q 009563 474 AQLGAILAPFVV-----------VLGGWLPFAVFAACGIIGGLFAFY 509 (532)
Q Consensus 474 ~~~g~~i~p~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
...|..++..+. .......|...+...++..+..+.
T Consensus 439 ~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~ 485 (498)
T COG3104 439 VAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLL 485 (498)
T ss_pred HHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 776766654444 223455677777766665555443
No 118
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.62 E-value=1.4e-14 Score=146.31 Aligned_cols=170 Identities=14% Similarity=0.009 Sum_probs=130.6
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHH---HhhcchHHHHHHHHHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCL---TAFSPNYSTYVVLRMLT 191 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~ 191 (532)
+++++|+ +..+.++..+...++..++.++.|+++|| +|||+.+..+.++..++.+. ...+++...++++|++.
T Consensus 277 l~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (490)
T PRK10642 277 LSHNLHY---SEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLML 352 (490)
T ss_pred HHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 3456788 77778888888999999999999999999 99999988887654443332 22345677888899999
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhccccc
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFLPE 267 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~~e 267 (532)
|++.+........++.|.+|++.|++.++.......++..++|.+.+++. +|+.++++..++.++.. +..+++||
T Consensus 353 g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~-~~~~~~pe 431 (490)
T PRK10642 353 AVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL-ITGVTMKE 431 (490)
T ss_pred HHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HHHHHhcc
Confidence 98877777777788889999999999999744444555567777776654 57877777776666655 45567799
Q ss_pred CchhHhhc-----CCHHHHHHHHHHHH
Q 009563 268 SPRWYLVR-----GKLNEAMKIMRAIA 289 (532)
Q Consensus 268 sp~~~~~~-----~~~~~~~~~~~~~~ 289 (532)
+|+|+..+ +|.+|+++.+.+++
T Consensus 432 s~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 432 TANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred ccCCCCCCccccccchhhHHHHhhccc
Confidence 99998765 88899998888774
No 119
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.61 E-value=1e-13 Score=138.39 Aligned_cols=343 Identities=11% Similarity=0.074 Sum_probs=224.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc-------------
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP------------- 179 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~------------- 179 (532)
.+|++.|++ +..+.|++.+.+=++..+...+..+++-| .-|-+.+-+|+++.+++++++++-+
T Consensus 121 ttiErRF~i---~Ss~sG~I~s~~dig~~l~i~fVsYfG~r-~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 121 TTIERRFKI---SSSQSGLIASSYDIGNLLLIIFVSYFGSR-GHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhhcCC---CCCcceeEeeecccchhhhhHhHHHhccc-cCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 799999999 99999999999999999999999999998 7888999999999999999987620
Q ss_pred ------h--------------------------------H-HHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHH
Q 009563 180 ------N--------------------------------Y-STYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGM 220 (532)
Q Consensus 180 ------~--------------------------------~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 220 (532)
+ + ..++++.++.|+|....++...+|+-|...+++-+..+|
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlg 276 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLG 276 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHH
Confidence 0 2 257788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh----------------------chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCH
Q 009563 221 STFYFFSTGIALLSGIAYIFQ----------------------TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKL 278 (532)
Q Consensus 221 ~~~~~~~~G~~~~~~l~~~l~----------------------~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~ 278 (532)
+......+|.++|.++++++. -|..-|++.+.+.++.. +.++++|...+ ...+.
T Consensus 277 i~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a-~p~f~fPk~lp---~~~~~ 352 (735)
T KOG3626|consen 277 ILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA-VPLFFFPKELP---KSQKR 352 (735)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-HHHHhCcccCc---ccccc
Confidence 999999999999999999865 35566777777777777 55566665432 11111
Q ss_pred HHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHH
Q 009563 279 NEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSV 358 (532)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (532)
.+++ +. + ...++. ...+......+..++.+...+++++||.+....+...+-......
T Consensus 353 ~~~~----~~---~--~~k~~~-------------~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G 410 (735)
T KOG3626|consen 353 KRAR----DL---H--VLKTES-------------GGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITG 410 (735)
T ss_pred chhh----hh---c--cccccc-------------ccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhh
Confidence 0000 00 0 000000 000000111112223445788899999766555444444333332
Q ss_pred HHHHhh-hccccCcchHHHHHHHHH----HHHHHHHHHHHHHHhhhCC--chhHHHHHHHHHHHHHH---HHhh------
Q 009563 359 VYYGIS-LNVVNLQTNLYLNVLVNA----VAEMPAFTITAVLLDKLGR--KPMTIGTLWFSGFFCLL---GSLV------ 422 (532)
Q Consensus 359 ~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~d~~gr--~~~~~~~~~~~~~~~~~---~~~~------ 422 (532)
....++ +.-.+++.+.+.+..+.+ -+..+|.+++|++++|+.. |....+.++...+.++. ..+.
T Consensus 411 ~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~ 490 (735)
T KOG3626|consen 411 YITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSP 490 (735)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCc
Confidence 222333 333344554444443333 2344788899999998743 34443333333333332 2221
Q ss_pred -----------------h-----------------------------------------cc------------c------
Q 009563 423 -----------------K-----------------------------------------NN------------G------ 426 (532)
Q Consensus 423 -----------------~-----------------------------------------~~------------~------ 426 (532)
. .. .
T Consensus 491 ~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~ 570 (735)
T KOG3626|consen 491 VAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGN 570 (735)
T ss_pred ccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCC
Confidence 0 00 0
Q ss_pred ------------h-hHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHH-HHHHHHHHHH
Q 009563 427 ------------I-WKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQ-LGAILAPFVV 485 (532)
Q Consensus 427 ------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~-~g~~i~p~~~ 485 (532)
. ....+++.+++..+..+......+.++...+|+|+|..++|+..++.. +|.+-+|++.
T Consensus 571 ~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIif 643 (735)
T KOG3626|consen 571 GSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIF 643 (735)
T ss_pred ceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhh
Confidence 0 012334444444555555667778888999999999999999988765 4555677776
No 120
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.59 E-value=1.2e-16 Score=159.67 Aligned_cols=352 Identities=13% Similarity=0.101 Sum_probs=3.0
Q ss_pred CCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc----------
Q 009563 110 GDGSSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP---------- 179 (532)
Q Consensus 110 ~~~~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~---------- 179 (532)
..+++|+++|++ +..+.|++.+.+-++..+..++..++.+| ..|-|.+.+|.++.+++++++++-+
T Consensus 24 ~~lttiErRF~l---~S~~~G~i~s~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~ 99 (539)
T PF03137_consen 24 SSLTTIERRFGL---SSSQSGLISSSYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEE 99 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHHhccHhhcCCCcccc
Confidence 334899999999 99999999999999999999999999998 6777899999999999998876410
Q ss_pred ----------------------------------------hHHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHH
Q 009563 180 ----------------------------------------NYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAG 219 (532)
Q Consensus 180 ----------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 219 (532)
-+..++++.++.|+|....++...+|+-|..++++-+..+
T Consensus 100 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYi 179 (539)
T PF03137_consen 100 ASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYI 179 (539)
T ss_dssp ----------------------------------------------------SSS-------------------------
T ss_pred ccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccch
Confidence 0346888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-------------------------chHHHHHHHHHHHHHHHHHHhcccccCchhHhh
Q 009563 220 MSTFYFFSTGIALLSGIAYIFQ-------------------------TWRALYIASSIPSILFLLIILPFLPESPRWYLV 274 (532)
Q Consensus 220 ~~~~~~~~~G~~~~~~l~~~l~-------------------------~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~ 274 (532)
|+......+|.++|.++++.+. .|-.-|++.+++.++.. +.++++|+.-+ .
T Consensus 180 Gi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~a-ipl~~FPk~lp---~ 255 (539)
T PF03137_consen 180 GILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSA-IPLFFFPKKLP---G 255 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHH-HHHHcCCccCC---C
Confidence 9999999999999999988654 14445556666666655 44445554321 1
Q ss_pred cCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHH
Q 009563 275 RGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINF 354 (532)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (532)
..+.++.++. + +.+ .++...+...+++..+...+..+......+++++||.+....+......+
T Consensus 256 ~~~~~~~~~~-~---~~~------------~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~ 319 (539)
T PF03137_consen 256 TSERQEEKES-S---ERK------------EEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESF 319 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccchhhh-h---hcc------------hhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 1000000000 0 000 00000000000000001112233445677889999876655544444444
Q ss_pred HHH-HHHHHhhhccccCcchHHHHHHHHH----HHHHHHHHHHHHHHhhhC--CchhHHHHHHHHHHHHHH---HHhh--
Q 009563 355 LCS-VVYYGISLNVVNLQTNLYLNVLVNA----VAEMPAFTITAVLLDKLG--RKPMTIGTLWFSGFFCLL---GSLV-- 422 (532)
Q Consensus 355 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~d~~g--r~~~~~~~~~~~~~~~~~---~~~~-- 422 (532)
... +..|..-+...+++.+......+.+ .+..+|.+++|++.+|++ .|..+....+...+..+. +.+.
T Consensus 320 ~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C 399 (539)
T PF03137_consen 320 IVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGC 399 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecC
Confidence 332 2333333333334444333333333 345588999999999974 344433333333332222 1111
Q ss_pred ----------hc----------------------------------c-chhHHHHHHHHHHHHHHHHhhhhhHhhhcccc
Q 009563 423 ----------KN----------------------------------N-GIWKIVRMICGVMGIFGVAGTYNLLFIYTTEL 457 (532)
Q Consensus 423 ----------~~----------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (532)
+. . ......+++..++..+..+.............
T Consensus 400 ~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~ 479 (539)
T PF03137_consen 400 PNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRC 479 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeecc
Confidence 00 0 00111233333444444555556666777889
Q ss_pred ccchhhhhHHHHHHHHHH-HHHHHHHHHH
Q 009563 458 FPTVVRNAALGCATQAAQ-LGAILAPFVV 485 (532)
Q Consensus 458 ~p~~~r~~~~g~~~~~~~-~g~~i~p~~~ 485 (532)
+|+++|+.+.|+...+.. +|.+-+|++.
T Consensus 480 V~~~~rs~AlGv~~~~~rllg~IPgPIif 508 (539)
T PF03137_consen 480 VPPEQRSFALGVQWLIIRLLGFIPGPIIF 508 (539)
T ss_dssp -----------------------------
T ss_pred CChhhcchhhhHHHHHHHhhcCcchHHHH
Confidence 999999999999988765 4666688776
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.57 E-value=1.1e-14 Score=120.47 Aligned_cols=135 Identities=24% Similarity=0.318 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecccC
Q 009563 132 VQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVG 211 (532)
Q Consensus 132 ~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 211 (532)
+.+.+.++..++.++.|++.|| +|||+.+..+..+..++.++..+.++++.+.+.+++.|++.+...+....++.|.+|
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 3455678889999999999999 999999999999999999999899999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhccccc
Q 009563 212 PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPE 267 (532)
Q Consensus 212 ~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~e 267 (532)
+++|++..++......+|..+++.+.+.+. +|++.+++.++..++..+..+++.||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999998886 89999999888887777566666665
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.54 E-value=6.8e-13 Score=130.43 Aligned_cols=363 Identities=15% Similarity=0.143 Sum_probs=214.3
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC-----CchHHHHHHHHHHHHHHHHHhhc----chHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRL-----GRKGSLTVVCMMNAVFGCLTAFS----PNYST 183 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~-----Grr~~l~~~~~~~~~~~~~~~~~----~~~~~ 183 (532)
|.+.+++|+ ++.+...+.+...+...+ -+++|.++|- + .||+.++++.++..++.+..+.. .+...
T Consensus 14 ~~l~~~l~l---s~~~~~~~~~~~~lPw~~-Kp~~g~lsD~-~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 14 PFLKDDLGL---SPAQLQRLSSLASLPWSI-KPLYGLLSDS-FPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHhCchHH-hhhHHhhccc-ccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 677899999 999999999988888765 6788999997 4 46777788888876666655543 35667
Q ss_pred HHHHHHHHHhhccccchhhhheeecccC--CCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHH
Q 009563 184 YVVLRMLTGFSTGGVGLCAFVLATEPVG--PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFL 258 (532)
Q Consensus 184 l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~ 258 (532)
..+.-++..+|.+.....+-+.+.|... ++.||...+.......+|.+++..++|.+. ++|..|.+.+++.++..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 7777788889999999999999999874 334778888888889999999999888877 88889988888877776
Q ss_pred HHHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhc
Q 009563 259 LIILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIK 338 (532)
Q Consensus 259 ~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (532)
+...+..+|.+. .+.++... .. ++.........+......++.++
T Consensus 169 ~~~~~~~~e~~~-----~~~~~~~~------------~~------------------~~~~~~~~~~~~~~~~~l~~~~~ 213 (433)
T PF03092_consen 169 IVALFLLEERKV-----RPADEVFS------------FG------------------KEEVPCLFGSFREQLSELWRALQ 213 (433)
T ss_pred HHHHHhhhhccc-----cccchhhc------------cc------------------ccccchhhHHHHHHHHHHHHHHh
Confidence 555666555211 00000000 00 00000000000111224566677
Q ss_pred ChHHHHHHH-HHHHHHHHHHH----HHHHhhhccccCcchHH---HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHH
Q 009563 339 SPLTRIRLF-LAVTINFLCSV----VYYGISLNVVNLQTNLY---LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLW 410 (532)
Q Consensus 339 ~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~ 410 (532)
.+..+...+ ..++....... .+|.........+.+.. ....+..++.++|..+......+..-|+++....+
T Consensus 214 ~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~ 293 (433)
T PF03092_consen 214 QRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTL 293 (433)
T ss_pred hhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 776665544 22221111110 11111111110012222 22233334445555555555555555666665555
Q ss_pred HHHHHHHHHHhh-hccc------hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHH
Q 009563 411 FSGFFCLLGSLV-KNNG------IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPF 483 (532)
Q Consensus 411 ~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~ 483 (532)
+..+..+.-... ...+ ..+ ..+.-.++..+.....+-....+++|+.|+...|+.+++..++.++|..++..
T Consensus 294 ~~~~~~l~~~~lv~~~n~~~Gi~d~~-f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~ 372 (433)
T PF03092_consen 294 VSVLASLFDLLLVTRWNLDLGIPDQW-FALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSST 372 (433)
T ss_pred HHHHHhcccEEEEEEEeeeeCcCCeE-EEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 554443322111 1100 000 22233444555555666667788999999999999999999999998877766
Q ss_pred HH-----Hhh--------hhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 009563 484 VV-----VLG--------GWLPFAVFAACGIIGGLFAFYLPETLNK 516 (532)
Q Consensus 484 ~~-----~~~--------~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 516 (532)
+. ..+ .....++..++.++...+..++|+.++.
T Consensus 373 lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~~ 418 (433)
T PF03092_consen 373 LGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKRI 418 (433)
T ss_pred HHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCchh
Confidence 66 111 2233444455555555556677765443
No 123
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.50 E-value=1.6e-11 Score=119.84 Aligned_cols=302 Identities=16% Similarity=0.149 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhc--cccchhhhheeecccCC
Q 009563 135 LFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFST--GGVGLCAFVLATEPVGP 212 (532)
Q Consensus 135 ~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~--~~~~~~~~~~i~~~~~~ 212 (532)
...+...+.++..|.++|| +|||..+....+...+..+...+.. +++++ +.|+.. +.......++++|....
T Consensus 70 ~~~~~~~i~s~~iG~lSD~-~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~ 143 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDR-YGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSE 143 (463)
T ss_pred hhHHHHHHHHhhhHHhhhh-hhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccch
Confidence 4566778899999999999 9999999999999888888777765 33333 444433 34456678899999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHHHH
Q 009563 213 SKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRAIA 289 (532)
Q Consensus 213 ~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~ 289 (532)
++|....++....+..+..++|.+++.+. |.-..|++..+..++..+...+++||+-.. +.+.++
T Consensus 144 ~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~---~~~~~~--------- 211 (463)
T KOG2816|consen 144 EERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE---KERSDA--------- 211 (463)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc---cccccc---------
Confidence 99999999999999999999999999887 777789999999888888889999997421 000000
Q ss_pred HHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHHHHHHHHHHHHHHH-----Hhh
Q 009563 290 KSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFLAVTINFLCSVVYY-----GIS 364 (532)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 364 (532)
+..+. ....... . .....+....+ ....+..+...+..+.....-. ...
T Consensus 212 -----~~~~~------------~~~~~~~-----~---~~~~~~~~~~~-~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~ 265 (463)
T KOG2816|consen 212 -----TLREL------------TPGSLDS-----S---HVADAFQSLTK-VGPDRLLLLLLLVAFLSSLPEAGGASDVLL 265 (463)
T ss_pred -----ccccc------------CCCcccc-----h---hhhhhhhhhcc-cCCCccchHHHHHHHHHHHHHhcCceeEEE
Confidence 00000 0000000 0 00001111111 1111112222222222211111 111
Q ss_pred hcccc-Ccch---HHHHHHHHHHHHHHHHHHHH-HHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 009563 365 LNVVN-LQTN---LYLNVLVNAVAEMPAFTITA-VLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMG 439 (532)
Q Consensus 365 ~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~-~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (532)
++... ++.+ ........+....++.++.. .+...++.|++...+.....+..+.+.+....+. .+. ....
T Consensus 266 ~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~----~~~-~~v~ 340 (463)
T KOG2816|consen 266 LYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWM----MFA-AGVV 340 (463)
T ss_pred EEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchh----hhH-HHHH
Confidence 22221 1222 22223333444555665555 6777789888888888888888888888766642 223 3333
Q ss_pred HHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 440 IFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
........+...+.++...+++.+|+++++...+..+.+.++|.+.
T Consensus 341 ~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~ 386 (463)
T KOG2816|consen 341 VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALY 386 (463)
T ss_pred HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHH
Confidence 3445677788889999999999999999999999999999998887
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.50 E-value=3.6e-13 Score=138.96 Aligned_cols=140 Identities=20% Similarity=0.048 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheee
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLAT 207 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 207 (532)
...+...+..++..++.++.|+++|| +|||++++++.++.++++++.+++++...+++.+++.|++.++..+...++++
T Consensus 596 ~~~~~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~a 674 (742)
T TIGR01299 596 MIYFVNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTV 674 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677889999999999999999 99999999999999999999999998888899999999988888999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 208 EPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 208 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
|++|.+.|++++++..+...+|.+++|.+++.+. +...+|++.++..++.+ ++..++||+.
T Consensus 675 El~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~-ll~~~LPET~ 737 (742)
T TIGR01299 675 ELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGG-LLALKLPDTR 737 (742)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHhCCCCc
Confidence 9999999999999999999999999999988765 55667877777777655 5555679874
No 125
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.50 E-value=2.3e-13 Score=134.95 Aligned_cols=144 Identities=16% Similarity=0.108 Sum_probs=125.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFV 204 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 204 (532)
+..+.|++.++..++..++.+++|++.|| +|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+....
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 338 (420)
T PRK09528 260 GTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFK 338 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66789999999999999999999999999 99999999999999999999999999999999999999998888888888
Q ss_pred eeecccCCCchhHHHHH-HHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 205 LATEPVGPSKRGAAGMS-TFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 205 ~i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
++.|.+|++.|+...+. .+....+|.++++.+.+++. ||+..|++.+++.++..++.++.+++.|
T Consensus 339 ~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 339 YITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999998887655 56778899999999998887 9999999988887776656665655543
No 126
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.48 E-value=3.5e-11 Score=113.61 Aligned_cols=347 Identities=11% Similarity=-0.010 Sum_probs=205.1
Q ss_pred ceeec-ccccchhhhHHH-HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 009563 114 STVTQ-WGLFCEEKYKVG-LVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLT 191 (532)
Q Consensus 114 ~i~~~-~~~~~~s~~~~~-~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 191 (532)
.+.+. .|+ +..|+. -+.-+..-.+....++...+.|. .|.|++++++.+...+..++..+.++...+-+..++.
T Consensus 29 yL~~~~kn~---T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~y 104 (412)
T PF01770_consen 29 YLTGPDKNF---TEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFY 104 (412)
T ss_pred HHcCCccCC---CHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHH
Confidence 33443 677 666654 46666777788899999999998 9999999999999999999999999999999999999
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ-----TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-----~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
|++.+. ..+-++|+--..++++-.++.+....+.-+|..++.++|-.+. +.+...++......+.+ +..+++|
T Consensus 105 g~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~-~~~~fLP 182 (412)
T PF01770_consen 105 GLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL-LIALFLP 182 (412)
T ss_pred HHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-HHHHHcC
Confidence 998776 6777889998899999999999999999999888888887776 55666665554444434 6667788
Q ss_pred cCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHH-
Q 009563 267 ESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIR- 345 (532)
Q Consensus 267 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 345 (532)
..++...-+++..+..+ . .+.+.+...+.++...+..+..........+........+++..+++..+.-
T Consensus 183 ~~~~S~~f~r~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WS 253 (412)
T PF01770_consen 183 MPKRSLFFHRKPPAEQD-------A--NESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWS 253 (412)
T ss_pred CCCcccceeccCccccc-------c--ccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 76654333322211110 0 0000000000000000000011111111111222334456677777765433
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccc--C-cchH--HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHH--HHHHHHHHHHHH
Q 009563 346 LFLAVTINFLCSVVYYGISLNVVN--L-QTNL--YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTI--GTLWFSGFFCLL 418 (532)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~--~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~--~~~~~~~~~~~~ 418 (532)
++..+....-....+|...++... . .... +..-....+.+.++.+..|++-.+..+-..+. ...++.+.++++
T Consensus 254 lWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~l 333 (412)
T PF01770_consen 254 LWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFL 333 (412)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333334455555554433 1 1111 11122233444556677777744444433333 233333444444
Q ss_pred HHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHH
Q 009563 419 GSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAI 479 (532)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~ 479 (532)
+....+.+ +..+..+++........++...-++.....+.-|.++|+.+++..+-..
T Consensus 334 m~~t~~Iw----v~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQt 390 (412)
T PF01770_consen 334 MSFTGNIW----VCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQT 390 (412)
T ss_pred HHHhhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHH
Confidence 43333222 5666666666667777777666666666677778888888776654443
No 127
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.41 E-value=1.5e-12 Score=128.45 Aligned_cols=143 Identities=12% Similarity=0.077 Sum_probs=125.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc----hHHHHHHHHHHHHhhccccchh
Q 009563 126 KYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP----NYSTYVVLRMLTGFSTGGVGLC 201 (532)
Q Consensus 126 ~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~ 201 (532)
....+...++..++..++.++.|++.|| +|||+++.++.++.+++..+..... +++.+++.+++.|++.+...+.
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~ 328 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS 328 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999 9999999999999988877776632 3466788899999999988888
Q ss_pred hhheeecccCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhh---------chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 202 AFVLATEPVGPSKRGAAGMSTF-YFFSTGIALLSGIAYIFQ---------TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 202 ~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~l~~~l~---------~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
...++.|++|+++|+++.++.+ ...++|.++||.+++.+. ||+..|++.+++.++..++.+++++|+.
T Consensus 329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 8999999999999999999997 678899999999998875 3999999999998888888888888874
No 128
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.38 E-value=1.4e-11 Score=120.97 Aligned_cols=148 Identities=14% Similarity=0.109 Sum_probs=121.8
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHh
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGF 193 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 193 (532)
.+++++|+ +..+.+++.+...++..++.++.|+++|| +|||+.+..+.....+......+.++.+.+++.+++.++
T Consensus 242 ~l~~~~~~---~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 317 (393)
T PRK15011 242 FIINELHL---PEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAI 317 (393)
T ss_pred HHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34567888 88899998888888888999999999999 999998888777666655555567788888889999988
Q ss_pred hccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhccccc
Q 009563 194 STGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPE 267 (532)
Q Consensus 194 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~e 267 (532)
+.+...+....+..|..|+ +|+++.++.+....+|..+++.+++.+. +|+..|++.+++.++.. +..++.||
T Consensus 318 ~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 392 (393)
T PRK15011 318 YIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATL-FCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHhhcC
Confidence 8777777777788898875 6999999999999999999999999876 89999998887777766 55555554
No 129
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.33 E-value=1.9e-11 Score=119.45 Aligned_cols=142 Identities=19% Similarity=0.118 Sum_probs=122.2
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchH--HHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNY--STYVVLRML 190 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l 190 (532)
+...++++. +..+.+++.+.+.++..++.++.|++.|| +|||+.+.++.++..++.++..+.++. ..++...++
T Consensus 229 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 229 KPYGQSLGL---SDGFLVLAVSISSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 344567788 88889999999999999999999999999 999999999999999888887776643 335566788
Q ss_pred HHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHH
Q 009563 191 TGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFL 258 (532)
Q Consensus 191 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~ 258 (532)
.|++.+...+..+.++.|.+|+++|++..++......+|..+++.+.+.+. ||++.|++.+++.++..
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 899888888888889999999999999999999999999999999998876 99999998887766543
No 130
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.33 E-value=2.1e-11 Score=117.93 Aligned_cols=144 Identities=28% Similarity=0.334 Sum_probs=132.4
Q ss_pred Cceeec-ccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchH-HHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 009563 113 SSTVTQ-WGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKG-SLTVVCMMNAVFGCLTAFSPNYSTYVVLRML 190 (532)
Q Consensus 113 ~~i~~~-~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 190 (532)
|.+.++ +|. +..+.++..+...++..++.++.|++.|| +|||+ .+..+.++..++.++..+.++.+.+++..++
T Consensus 199 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (352)
T cd06174 199 PLYLQEVLGL---SAAEAGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLL 274 (352)
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 344444 488 89999999999999999999999999999 99999 9999999999999999999999999999999
Q ss_pred HHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHH
Q 009563 191 TGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLI 260 (532)
Q Consensus 191 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~ 260 (532)
.|++.+...+....++.|..|+++|++.+++......+|..+++.+.+.+. +|++.+++.+++.++..++
T Consensus 275 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~ 347 (352)
T cd06174 275 LGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALL 347 (352)
T ss_pred HHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998886 9999999999988887633
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.33 E-value=1.6e-11 Score=121.32 Aligned_cols=142 Identities=18% Similarity=0.123 Sum_probs=122.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.++.|. +..+.+++.+.+.++..++.++.|++.|| +|||+.+..+.+...++.++..+.++.+.+.+..++.|
T Consensus 244 p~~~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (406)
T PRK11551 244 PSLLVGQGL---SRSQAGLVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAG 319 (406)
T ss_pred HHHHHhCCC---ChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 555567788 88999999999999999999999999999 99999998887777777777777788888888889999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHH
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFL 258 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~ 258 (532)
++.+...+...+++.|.+|+++|++..++......+|..++|.+++.+. +|...++......++..
T Consensus 320 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK11551 320 LFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAA 389 (406)
T ss_pred HHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHH
Confidence 9888888888999999999999999999999999999999999999875 56666666665555544
No 132
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.32 E-value=4.2e-11 Score=118.55 Aligned_cols=137 Identities=15% Similarity=0.143 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheee
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLAT 207 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 207 (532)
..+.+.+++.++..++.+..|++.|| +|||+.+..+.++..++.+...+.++.+.+++.+++.|++.+...+...+++.
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 337 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLV 337 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHH
Confidence 45677778888999999999999999 99999999999988888888888888888999999999999999999888888
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhccc
Q 009563 208 EPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFL 265 (532)
Q Consensus 208 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~ 265 (532)
+..|+++|++.+++......+|..+||.+++.+. ||++.|++.+++.++..++.++..
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 338 YNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999886 899999999988888775554443
No 133
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.32 E-value=7.2e-11 Score=117.04 Aligned_cols=153 Identities=18% Similarity=0.118 Sum_probs=132.3
Q ss_pred Cceeec-ccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 009563 113 SSTVTQ-WGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLT 191 (532)
Q Consensus 113 ~~i~~~-~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 191 (532)
|.+.++ +|. +..+.|++.+.+.++..++.++.+++.|| .++++.+..+.++.+++.++..+.++.+.+.+..++.
T Consensus 247 p~~~~~~~g~---~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 247 PALADEVWQM---GAAQIGLLYAAVPLGAALGALTSGWLAHS-ARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALF 322 (417)
T ss_pred HHHHHhccCC---ChhHhHHHHHHHHHHHHHHHHHHHHhhhc-cCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 334444 888 88999999999999999999999999998 7888888888888888888888888888888899999
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccC
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPES 268 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~es 268 (532)
|++.+...+...+++.|..|++.|++..++......+|..+|+.+.+.+. |++..+++.++..++..++.+..+++.
T Consensus 323 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (417)
T PRK10489 323 GYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGEL 402 (417)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccc
Confidence 99988877888889999999999999999999999999999999999887 778888888877777666777777765
Q ss_pred c
Q 009563 269 P 269 (532)
Q Consensus 269 p 269 (532)
+
T Consensus 403 ~ 403 (417)
T PRK10489 403 R 403 (417)
T ss_pred c
Confidence 3
No 134
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.32 E-value=3.6e-09 Score=101.80 Aligned_cols=305 Identities=15% Similarity=0.085 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecccCC
Q 009563 133 QALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGP 212 (532)
Q Consensus 133 ~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 212 (532)
.++-+....+++++.+.+.|+ .|.|..+.++........+.+-+ +|-+-++++-.+.|+|.+..+..--.|++|..++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~ 133 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTR 133 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCCh
Confidence 677788888999999999998 99999999999999888877766 4566688899999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhh-----------chH-HHH----------HHHHHHHHHHH--HHHhcccccC
Q 009563 213 SKRGAAGMSTFYFFSTGIALLSGIAYIFQ-----------TWR-ALY----------IASSIPSILFL--LIILPFLPES 268 (532)
Q Consensus 213 ~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-----------~wr-~~f----------~~~~~~~~~~~--~~~~~~~~es 268 (532)
+.+.+..++.-.....+.++|..+...+. +-+ ..+ .+.+++..+.. ++...++|..
T Consensus 134 ~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~ 213 (461)
T KOG3098|consen 134 ETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSK 213 (461)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCcc
Confidence 99999999888888888888766654443 111 111 11111111100 0111122211
Q ss_pred chhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcChHHHHHHHH
Q 009563 269 PRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSPLTRIRLFL 348 (532)
Q Consensus 269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (532)
.... +.+. . +. ......+...+++++++.......
T Consensus 214 -~~~~------~~~~------------------------------~-~~-------~~~~~l~~~~~l~~~~~ml~L~~~ 248 (461)
T KOG3098|consen 214 -DVVN------CKSS------------------------------S-ET-------SFSELLKLTFKLLKTPKMLLLFPF 248 (461)
T ss_pred -chhh------hhhh------------------------------c-cc-------cHHHHHHHHHHHhcCHhHHHHHHH
Confidence 0000 0000 0 00 000001123345566654433333
Q ss_pred HHHHHHHHHHHHHHhhh--ccc-cCc-ch---HHHHHHHHHHHHHHHHHHHHHHHhh---hCCchhHHHHHHHHHHHHHH
Q 009563 349 AVTINFLCSVVYYGISL--NVV-NLQ-TN---LYLNVLVNAVAEMPAFTITAVLLDK---LGRKPMTIGTLWFSGFFCLL 418 (532)
Q Consensus 349 ~~~~~~~~~~~~~~~~~--~~~-~~~-~~---~~~~~~~~~~~~~~~~~~~~~l~d~---~gr~~~~~~~~~~~~~~~~~ 418 (532)
.+..++..++-.-..+. ... ... .+ .....+..+++++++....+.+.+| +||++.+.++..+..+.+++
T Consensus 249 f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~l 328 (461)
T KOG3098|consen 249 FFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLL 328 (461)
T ss_pred HHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHH
Confidence 33333322221111111 111 111 11 2334455667788888888888766 68888888888877777766
Q ss_pred HHhhhccch--------------hHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 009563 419 GSLVKNNGI--------------WKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFV 484 (532)
Q Consensus 419 ~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~ 484 (532)
......... ...+..++.++.|++-.........++...+ ++.|..+.++.-.-..++..++-+.
T Consensus 329 i~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 329 IHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 655422111 1236777888899999898899999999999 5667888888877766666554444
Q ss_pred H
Q 009563 485 V 485 (532)
Q Consensus 485 ~ 485 (532)
.
T Consensus 408 ~ 408 (461)
T KOG3098|consen 408 S 408 (461)
T ss_pred h
Confidence 3
No 135
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.31 E-value=6.5e-11 Score=115.71 Aligned_cols=147 Identities=15% Similarity=0.130 Sum_probs=122.5
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHh
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGF 193 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 193 (532)
.+.+++|. +..+.+++.+...+...++.++.|++.|| +|||+.+.++.++..+..++..+.++.+.+++.+++.|+
T Consensus 225 ~~~~~~g~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 300 (375)
T TIGR00899 225 LIIHELGL---PDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAI 300 (375)
T ss_pred HHHHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888 88899998888888888899999999999 999999988887776666666667788888889999999
Q ss_pred hccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 194 STGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 194 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
+.+...+....++.|..|+ +++++.++......+|..+++.+++.+. ||+..|++.++..++.. +..++++
T Consensus 301 ~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 374 (375)
T TIGR00899 301 FIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVAL-FCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH-HHHheec
Confidence 9888888888888998875 5679999999999999999999998876 89999999888877766 4444444
No 136
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.29 E-value=1.1e-09 Score=100.65 Aligned_cols=149 Identities=17% Similarity=0.137 Sum_probs=108.1
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhh
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFS 194 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 194 (532)
+-+++|+ +..|++.+....+...++...+.|.++|| +|||+.-++.+++.+++++. -..++++.++++|++.|++
T Consensus 60 LY~~yg~---~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGia 134 (354)
T PF05631_consen 60 LYESYGF---SEHQIAILFVAGFASSAIFGTFVGSLADR-YGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIA 134 (354)
T ss_pred HHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHH
Confidence 3457888 99999999999999999999999999999 99999999999999999964 4568999999999999999
Q ss_pred ccccchhhhhee-ecc----cCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHHHhc
Q 009563 195 TGGVGLCAFVLA-TEP----VGPSKRGAAGMSTF-YFFSTGIALLSGIAYIFQ-----TWRALYIASSIPSILFLLIILP 263 (532)
Q Consensus 195 ~~~~~~~~~~~i-~~~----~~~~~r~~~~~~~~-~~~~~G~~~~~~l~~~l~-----~wr~~f~~~~~~~~~~~~~~~~ 263 (532)
.+..+.+--+++ .|. +|++..+..++... ...++-.+++.+++.++. |-..+|....+..++..+++..
T Consensus 135 TSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 135 TSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILK 214 (354)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHh
Confidence 999888776654 332 23333333333333 222233344444444443 3467888887777777655555
Q ss_pred ccccC
Q 009563 264 FLPES 268 (532)
Q Consensus 264 ~~~es 268 (532)
.-+|.
T Consensus 215 ~W~EN 219 (354)
T PF05631_consen 215 TWPEN 219 (354)
T ss_pred ccccc
Confidence 55554
No 137
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.29 E-value=1.3e-10 Score=113.64 Aligned_cols=140 Identities=11% Similarity=0.015 Sum_probs=124.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|...+|+|. +..+.|++.++..++..++.++++++.|| +|+|+.+.++.++..+..++.+++++.+.+++.++++|
T Consensus 229 ~~~l~~~g~---s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g 304 (382)
T TIGR00902 229 AIYWQAAGI---SASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHC 304 (382)
T ss_pred HHHHHHCCC---CHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 334467899 99999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHH
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTF-YFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFL 258 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~ 258 (532)
+..+...+....++.+. |+++|++..++++ ...++|..+++.++|.+. |+ ..|++.+++.++..
T Consensus 305 ~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 305 GTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 99999999999999998 9999999999875 577899999999999987 64 45666666666544
No 138
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.25 E-value=6.3e-11 Score=116.82 Aligned_cols=137 Identities=21% Similarity=0.216 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeec
Q 009563 129 VGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATE 208 (532)
Q Consensus 129 ~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 208 (532)
.++..+.+.++..++.++.|++.|| +|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.....+.|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 251 AALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4566678888999999999999999 999999999999888888888888888888899999999999888887788889
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 209 PVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 209 ~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
..|+++|+++.++......+|..+++.+.+.+. ||++.|++.++..++..++.+++.+
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999888887776 8999999988887776644444333
No 139
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.25 E-value=4.8e-11 Score=119.21 Aligned_cols=143 Identities=15% Similarity=0.199 Sum_probs=118.3
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCC-CCchHHHHH--HHHHHHHHHHHHhhcchHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSR-LGRKGSLTV--VCMMNAVFGCLTAFSPNYSTYVVLRM 189 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~-~Grr~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~r~ 189 (532)
|.+.+++|. +..+.+++.++..++..++.++.|+++||+ +++|+...+ +.++.+++.++..+.++++.+++.++
T Consensus 265 ~~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~ 341 (455)
T TIGR00892 265 VPYAKDKGV---DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCI 341 (455)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 445567888 899999999999999999999999999971 233433333 34444555566677889999999999
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHH
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFL 258 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~ 258 (532)
+.|++.+...+...+++.|.+|++++++..++.+....+|.+++|.+++.+. +|++.|++.++..++..
T Consensus 342 ~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 342 FFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAG 414 (455)
T ss_pred HHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999775 59999999888766654
No 140
>PRK12382 putative transporter; Provisional
Probab=99.24 E-value=1.2e-10 Score=114.42 Aligned_cols=136 Identities=17% Similarity=0.152 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeec
Q 009563 129 VGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATE 208 (532)
Q Consensus 129 ~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 208 (532)
.++..+.+.++..+++++.|++.|| +|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.....+.|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 329 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVK 329 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4556677888889999999999999 999999999999999998888888888888899999999999888888888899
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhccc
Q 009563 209 PVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFL 265 (532)
Q Consensus 209 ~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~ 265 (532)
.+|+++|++..++.+....+|..+++.+.+.+. ||+..|++.++..++..++.+++.
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 330 RVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999998876 999999999888877665554443
No 141
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.23 E-value=9.3e-11 Score=118.68 Aligned_cols=153 Identities=16% Similarity=0.070 Sum_probs=120.9
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh-----cc------hH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF-----SP------NY 181 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~-----~~------~~ 181 (532)
|.+.+++|. +..+.++......++..++.++.|+++|| +|||+.+.++.++.+++.++.++ .+ +.
T Consensus 308 ~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (481)
T TIGR00879 308 PTIFENAGV---STDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGN 383 (481)
T ss_pred HHHHHHcCC---CchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Confidence 566677888 77888899999999999999999999999 99999999998888887776652 11 23
Q ss_pred HHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHH
Q 009563 182 STYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFL 258 (532)
Q Consensus 182 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~ 258 (532)
..+....++.+.......+....++.|.+|+++|+++.++......+|.++++.+.+.+. +|++.|++.++++++..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 463 (481)
T TIGR00879 384 VAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGL 463 (481)
T ss_pred HHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHH
Confidence 333333333333333344666778899999999999999999999999999999888765 89999999998888877
Q ss_pred HHHhcccccCc
Q 009563 259 LIILPFLPESP 269 (532)
Q Consensus 259 ~~~~~~~~esp 269 (532)
++.+++.||++
T Consensus 464 i~~~~~~~~~~ 474 (481)
T TIGR00879 464 IFVYFFLPETK 474 (481)
T ss_pred HHHheecccCC
Confidence 67777778764
No 142
>PRK03545 putative arabinose transporter; Provisional
Probab=99.23 E-value=3.1e-10 Score=111.43 Aligned_cols=147 Identities=16% Similarity=0.056 Sum_probs=119.1
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHH-HHHhhcchHHHHHHHHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFG-CLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G 192 (532)
.+.+++|. +..+.+++.+...++..++.++.|++.|| +|||+... +..+..++. .+....++.+.+++..++.|
T Consensus 231 ~l~~~~g~---s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g 305 (390)
T PRK03545 231 FVQQVAGL---SENFATLLLLLFGGAGIIGSVLFSRLGNR-HPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHhcCC---CccHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 34555788 88899999999999999999999999999 89887544 444444443 33455678888888999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
++.+...+.....+.+..| ++|++++++......+|..+|+.+++.+. |++..|++.+++.++..++.++..+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9988777777788888766 68899999999999999999999999887 9999999999888887756555554
No 143
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.18 E-value=2.1e-10 Score=116.60 Aligned_cols=140 Identities=17% Similarity=0.113 Sum_probs=109.8
Q ss_pred Ccee-ecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc--chHHHHHHHHH
Q 009563 113 SSTV-TQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS--PNYSTYVVLRM 189 (532)
Q Consensus 113 ~~i~-~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~ 189 (532)
|.+. +++|. +..+.+++.+.+.++..++.++.|+++|| +|||+++..+.++..++.++.... .+.+.+.+..+
T Consensus 299 p~~l~~~~g~---~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 299 PTYLKTDLGY---DPHTVANVLFFSGFGAAVGCCVGGFLGDW-LGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHHHHhhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 4444 58899 99999999999999999999999999999 999999988887776665544433 34444555555
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHH
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSIL 256 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~ 256 (532)
+.++......+..+.++.|.+|+++|++.+++......+|..++|.+++.+. ||+..+++.+....+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 5554444455667788899999999999999999999999999999999887 788877665544333
No 144
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.18 E-value=6.7e-10 Score=108.98 Aligned_cols=152 Identities=16% Similarity=0.141 Sum_probs=120.9
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF-SPNYSTYVVLRMLT 191 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~ 191 (532)
|.+.+++|+ +..+.|...+.+.++..++.++.|++.|| +|||+.+..+..+..++.++... .++...+ .-++.
T Consensus 229 p~~l~~~g~---s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~ 302 (393)
T PRK09705 229 PAFYIEIGA---SAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVC 302 (393)
T ss_pred HHHHHHcCC---ChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHH
Confidence 444456788 89999999999999999999999999999 99999999988887777665543 3333222 23567
Q ss_pred HhhccccchhhhheeecccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 192 GFSTGGVGLCAFVLATEPVG-PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++. +|...|++.++..++..+....+.|
T Consensus 303 g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 303 GLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 88888888877766667664 578999999999999999999999998887 5888888888877777766677788
Q ss_pred cCch
Q 009563 267 ESPR 270 (532)
Q Consensus 267 esp~ 270 (532)
|++.
T Consensus 383 ~~~~ 386 (393)
T PRK09705 383 ARFP 386 (393)
T ss_pred cccc
Confidence 8653
No 145
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.18 E-value=5.7e-10 Score=109.87 Aligned_cols=143 Identities=17% Similarity=0.141 Sum_probs=106.4
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchH--HH------HHHHHHHHHHHHHHhhcchHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKG--SL------TVVCMMNAVFGCLTAFSPNYSTYV 185 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~--~l------~~~~~~~~~~~~~~~~~~~~~~l~ 185 (532)
.+.+++|. +..+.+++.+...++..++.++.|++.|| +|||+ .. ..+.++..+........++.+..+
T Consensus 241 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (399)
T TIGR00893 241 YLVQERGL---SILEAGFMASLPGIVGFIGMILGGRLSDL-LLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAAL 316 (399)
T ss_pred HHHHHhcc---cHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 34456788 88999999999999999999999999999 99996 11 111111222222222233444444
Q ss_pred HHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---c-hHHHHHHHHHHHHHHHHHH
Q 009563 186 VLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---T-WRALYIASSIPSILFLLII 261 (532)
Q Consensus 186 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~-wr~~f~~~~~~~~~~~~~~ 261 (532)
...++.+++.+ ..+....++.|.+|+++|++..++......+|..+++.+.+.+. + |+..|++.++..++..+..
T Consensus 317 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 317 ALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 44455555444 78889999999999999999999999999999999999998886 6 9999998888777665443
No 146
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.18 E-value=4.4e-10 Score=113.73 Aligned_cols=153 Identities=14% Similarity=-0.026 Sum_probs=115.4
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc--hH--HHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP--NY--STYVVLR 188 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~--~~--~~l~~~r 188 (532)
|.+.+++|. +....++......++..++.++.|+++|| +|||+.++.+.++.+++.++.+... +. .....+.
T Consensus 295 p~i~~~~g~---~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 370 (479)
T PRK10077 295 PEIFKTLGA---STDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSM 370 (479)
T ss_pred HHHHHHcCC---CCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 666677888 66666777777888899999999999999 9999999999999888887765431 11 1223334
Q ss_pred HHHHhhccc-cchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh------h---chHHHHHHHHHHHHHHH
Q 009563 189 MLTGFSTGG-VGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF------Q---TWRALYIASSIPSILFL 258 (532)
Q Consensus 189 ~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l------~---~wr~~f~~~~~~~~~~~ 258 (532)
++.+++.+. ..+....++.|.+|+++|++++++......+|.++++.+.+.+ . +|++.|++.+++.++..
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (479)
T PRK10077 371 LFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAA 450 (479)
T ss_pred HHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHH
Confidence 444444443 2366789999999999999999999999988888875544322 1 78888998888877777
Q ss_pred HHHhcccccCc
Q 009563 259 LIILPFLPESP 269 (532)
Q Consensus 259 ~~~~~~~~esp 269 (532)
++.+++.||++
T Consensus 451 ~~~~~~~~e~~ 461 (479)
T PRK10077 451 LFMWKFVPETK 461 (479)
T ss_pred HHHHhccccCC
Confidence 67777788874
No 147
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.16 E-value=3.7e-09 Score=100.98 Aligned_cols=170 Identities=18% Similarity=0.191 Sum_probs=125.3
Q ss_pred hhhcChHHHHHHHHHHHHHHHHHHHHHHhhhccccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHH
Q 009563 335 DVIKSPLTRIRLFLAVTINFLCSVVYYGISLNVVNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWF 411 (532)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~ 411 (532)
+++.++.....++...++.+.....++.+-.++++.+... +......-.+.++.-++.+++++|+|+-+++.+++..
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~ 445 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLAC 445 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhH
Confidence 5566665555555555566655555555555555544222 1223334466778888999999999999999999998
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHH-----HHHHHHHHHHH-
Q 009563 412 SGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAA-----QLGAILAPFVV- 485 (532)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~-----~~g~~i~p~~~- 485 (532)
..+-++.+....+.+ ..+..-++-++..+..+....+|+....||+.++++.++..... .+|+++|..+.
T Consensus 446 ~~~Rf~~~S~L~n~W----~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~ 521 (618)
T KOG3762|consen 446 NVGRFLYYSYLQNPW----MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE 521 (618)
T ss_pred HHHHHHHHHHhcCch----heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe
Confidence 888888888776654 56778889999999999999999999999999999999988753 35566666666
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHh
Q 009563 486 VLGGWLPFAVFAACGIIGGLFAF 508 (532)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~ 508 (532)
.++....|.++++.+++..++..
T Consensus 522 ~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 522 RFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred eehhHHHHHHHHHHHHHHHHHHH
Confidence 67778888888877777666543
No 148
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.15 E-value=1.4e-09 Score=105.90 Aligned_cols=156 Identities=17% Similarity=0.070 Sum_probs=111.0
Q ss_pred HHHHHHHHHhhhccccCcch---HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccc--hh
Q 009563 354 FLCSVVYYGISLNVVNLQTN---LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNG--IW 428 (532)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 428 (532)
+........++.+..+.+.+ .........++.+++.++.|++.||+|||+.+..+..+..++.++..+..... ..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (365)
T TIGR00900 13 IGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNI 92 (365)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence 33344444444444443333 33444455567778899999999999999999998888777776666554111 11
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHH
Q 009563 429 KIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIG 503 (532)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~ 503 (532)
+ ..++..++.+++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+. ..++...|++.++..++.
T Consensus 93 ~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~ 171 (365)
T TIGR00900 93 W-QVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAIS 171 (365)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 1 4566677788888888899999999999999999999999999999999998876 345666777766666555
Q ss_pred HHHHhhc
Q 009563 504 GLFAFYL 510 (532)
Q Consensus 504 ~~~~~~l 510 (532)
.++.+.+
T Consensus 172 ~~~~~~~ 178 (365)
T TIGR00900 172 ALLIVSV 178 (365)
T ss_pred HHHHHhc
Confidence 5544433
No 149
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.15 E-value=1.6e-10 Score=113.77 Aligned_cols=137 Identities=18% Similarity=0.115 Sum_probs=108.9
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHH--HHHhh--cchHHHHHHHHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFG--CLTAF--SPNYSTYVVLRML 190 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~l~~~r~l 190 (532)
+++++|. +..+.+++.+...++..++.++.|+++|| +|||+.+..+..+..+.. ++..+ .++.+.+++..++
T Consensus 246 ~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T TIGR00883 246 LTQTLGL---SANSALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLG 321 (394)
T ss_pred HHHhcCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 3467888 88899999999999999999999999999 999998876555444433 22222 2567777788899
Q ss_pred HHhhccccchhhhheeecccCCCchhHHHHH-HHHHHHHHHHHHHHHHHHhh---c-hHHHHHHHHHHHH
Q 009563 191 TGFSTGGVGLCAFVLATEPVGPSKRGAAGMS-TFYFFSTGIALLSGIAYIFQ---T-WRALYIASSIPSI 255 (532)
Q Consensus 191 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~l~~~l~---~-wr~~f~~~~~~~~ 255 (532)
.|++.+...+...+++.|.+|+++|+++.++ ...+..+|..++|.+++.+. | |++.++...+..+
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 322 LALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 9999988899999999999999999999987 45666788889999998876 5 8887776665443
No 150
>PRK10054 putative transporter; Provisional
Probab=99.14 E-value=2.8e-09 Score=104.59 Aligned_cols=164 Identities=10% Similarity=0.057 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-ccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHh
Q 009563 346 LFLAVTINFLCSVVYYGISLNV-VNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSL 421 (532)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~ 421 (532)
....++...........++.+. ++.+.+. ........+..+++.+..|+++||+|||+.+..+.++..++.+.+.+
T Consensus 13 ~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~ 92 (395)
T PRK10054 13 LASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Confidence 3334444444444443344433 3334333 33334445667788899999999999999998888888777776666
Q ss_pred hhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH----HhhhhhHHHHHH
Q 009563 422 VKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV----VLGGWLPFAVFA 497 (532)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~~~~~~~~~~~~ 497 (532)
.++.. ..+++..+.+.+.+...+....+..|..|++.|+++.|+.+...++|..++|.+. ..++...|.+.+
T Consensus 93 ~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~ 168 (395)
T PRK10054 93 VNNVT----LVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAA 168 (395)
T ss_pred HhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 54321 2333344455555566777888999999999999999999999999999998887 345677788777
Q ss_pred HHHHHHHHHH-hhccCC
Q 009563 498 ACGIIGGLFA-FYLPET 513 (532)
Q Consensus 498 ~~~~~~~~~~-~~l~~~ 513 (532)
++.++..++. +++|+.
T Consensus 169 ~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 169 ICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 7766665444 345544
No 151
>PRK09952 shikimate transporter; Provisional
Probab=99.14 E-value=1.6e-09 Score=107.80 Aligned_cols=149 Identities=14% Similarity=0.098 Sum_probs=109.4
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh---c-chHHHHHHHHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF---S-PNYSTYVVLRML 190 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~l~~~r~l 190 (532)
+.+++|+ +......+.....+...++.++.|+++|| +|||+++..+.++..++.+.... . ++.+.+++..++
T Consensus 277 ~~~~~g~---s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (438)
T PRK09952 277 STQNLGL---PRELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIML 352 (438)
T ss_pred HHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 3456777 66655555666667778889999999999 99999998887766555433322 2 234455556677
Q ss_pred HHhhccccchhhhheeecccCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHHHhcc
Q 009563 191 TGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTF-YFFSTGIALLSGIAYIFQ-----TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 191 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~l~~~l~-----~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
.|++.+...+...+++.|.+|.+.|+...++.. .+..+|..++|.+.+.+. +|+..+.+.++..++.. +..+.
T Consensus 353 ~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~-v~~~~ 431 (438)
T PRK09952 353 ANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISA-MTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH-HHHHH
Confidence 788888888888899999999999998888854 445588889998888874 48888888777777766 44455
Q ss_pred cccC
Q 009563 265 LPES 268 (532)
Q Consensus 265 ~~es 268 (532)
++|+
T Consensus 432 ~~~~ 435 (438)
T PRK09952 432 MKDN 435 (438)
T ss_pred cccc
Confidence 5664
No 152
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.14 E-value=2.2e-09 Score=106.14 Aligned_cols=137 Identities=18% Similarity=0.151 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIY 453 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (532)
.........++..++.++.|++.||+|||+.+..+.++.+++.++..+..+.. ..++..++.+++.+..++...++
T Consensus 49 ~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~l~G~~~~~~~~~~~~~ 124 (405)
T TIGR00891 49 AASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYI----TMFIARLVIGIGMGGEYGSSAAY 124 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHH----HHHHHHHHHHhhhhhhhHHHHHH
Confidence 33444555677788999999999999999999999888888877776654322 45666778888888888999999
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh--hhhHHHHHHHHHHHHHHHHhhccCCC
Q 009563 454 TTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLG--GWLPFAVFAACGIIGGLFAFYLPETL 514 (532)
Q Consensus 454 ~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~ 514 (532)
+.|.+|+++|+.+.++.+....+|..++|.+. ..+ +...|++.++..++..+....+||++
T Consensus 125 i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 192 (405)
T TIGR00891 125 VIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAE 192 (405)
T ss_pred HHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999999998888776 223 45566555444444444445566643
No 153
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.14 E-value=2e-09 Score=106.52 Aligned_cols=149 Identities=17% Similarity=0.163 Sum_probs=131.0
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCch--HHHHHHHHHHHHHHHHHhh--------cchHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRK--GSLTVVCMMNAVFGCLTAF--------SPNYST 183 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~ 183 (532)
...+++|+ +..+...+.-+..+..++|++++|++.|| +|.| ++++++++++.+..+...+ .++.+.
T Consensus 307 ~a~~~lg~---s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~ 382 (477)
T PF11700_consen 307 YATEVLGM---STTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWE 382 (477)
T ss_pred HHHHhcCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHH
Confidence 34568999 99999999999999999999999999999 9999 8999998888777666665 678888
Q ss_pred HHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHH
Q 009563 184 YVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLL 259 (532)
Q Consensus 184 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~ 259 (532)
+.+.-++.|+..|..++...++.+|+.|+++.+..+|++....-....+||.+-+.+. +-|+.++...++.++.+
T Consensus 383 f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl- 461 (477)
T PF11700_consen 383 FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGL- 461 (477)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999988887 58888888887777766
Q ss_pred HHhccccc
Q 009563 260 IILPFLPE 267 (532)
Q Consensus 260 ~~~~~~~e 267 (532)
++++.++.
T Consensus 462 ~ll~~v~~ 469 (477)
T PF11700_consen 462 ILLFFVDV 469 (477)
T ss_pred HHHhhccc
Confidence 44455554
No 154
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.14 E-value=1.3e-09 Score=107.50 Aligned_cols=143 Identities=15% Similarity=0.158 Sum_probs=110.8
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHH-HHHHHHHHHHHHHhh-----cchHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLT-VVCMMNAVFGCLTAF-----SPNYSTYVV 186 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~-~~~~~~~~~~~~~~~-----~~~~~~l~~ 186 (532)
|.+.+++|. +..+.+++.+...++..++.++.|+++|| +|||+.+. .+.+..+++.+...+ .++.+.+++
T Consensus 246 p~~~~~~g~---s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (402)
T TIGR00897 246 PMFVAELGF---STSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALI 321 (402)
T ss_pred HHHHHHcCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHH
Confidence 555677888 88899999999999999999999999999 99988764 333333443333321 346777778
Q ss_pred HHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHH
Q 009563 187 LRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLII 261 (532)
Q Consensus 187 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~ 261 (532)
..++.|++.+...+. ...+.|.. +++|+++.++.+....+|..++|.+++.+. ||+..+++.++..++..++.
T Consensus 322 ~~~~~G~~~~~~~~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~ 397 (402)
T TIGR00897 322 IAIALGIFLAGYVPL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLT 397 (402)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 889999888776543 45566765 468999999999999999999999988877 89999999888877766333
No 155
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.13 E-value=1.3e-09 Score=106.69 Aligned_cols=139 Identities=17% Similarity=0.182 Sum_probs=115.3
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|...++.|. +..+.+++.+...++..+++++.|++.|| +|+|+++..+..+..++.+... + ...+....++.|
T Consensus 224 p~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g 296 (381)
T PRK03633 224 PLYLNHQGM---SDASIGFWMALLVSAGILGQWPIGRLADR-FGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILG 296 (381)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHhhhHHHHHH-cCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHH
Confidence 444456688 88899999999999999999999999999 9999999888888777665443 2 234456778888
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHH
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFL 258 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~ 258 (532)
++.....|...+.+.|..|+++++...+......++|.+++|.+++.+. +|++.|++.+...++..
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH
Confidence 8877888989998999998888888888888889999999999999886 89999998887777655
No 156
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.13 E-value=2e-09 Score=105.91 Aligned_cols=137 Identities=16% Similarity=0.120 Sum_probs=116.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFV 204 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 204 (532)
+....|.+.++..+...++.++.|++.|| +|||+.+.++.++.+++.++...+++.+.+++.+++.|++.+........
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 330 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFK 330 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55678899999999999999999999999 99999999999999998888888899999999999999987766666667
Q ss_pred eeecccCCCchhHHHHH-HHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHh
Q 009563 205 LATEPVGPSKRGAAGMS-TFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIIL 262 (532)
Q Consensus 205 ~i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~ 262 (532)
++.+..+++.++...+. .+....+|..+++.+++++. ||+..|.+.+++.++..++..
T Consensus 331 ~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 331 YITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 77788888888776655 56788999999999999886 899999999888877664443
No 157
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.13 E-value=2.6e-09 Score=106.90 Aligned_cols=142 Identities=19% Similarity=0.117 Sum_probs=127.9
Q ss_pred Cce-eecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 009563 113 SST-VTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLT 191 (532)
Q Consensus 113 ~~i-~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 191 (532)
|.+ .+++|. +...+|++.+.+.+|..+|+++.+++.+| +++++.+..+.++++++.+..+++++.+..++.-++.
T Consensus 242 Pl~a~~~l~~---~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~ 317 (524)
T PF05977_consen 242 PLFARDVLGG---GASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALALLLLALSPSFWLALIALFLA 317 (524)
T ss_pred hHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 444 456888 89999999999999999999999999998 9999999999999999999999999999999999999
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHH
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFL 258 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~ 258 (532)
|++.....+...+.+.+..|++.|||+++++.+....+..+|..+.|.+. |-+..+.+.++..++..
T Consensus 318 G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 318 GAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99999988888999999999999999999999999999999999999887 77888887776555544
No 158
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.12 E-value=9.2e-10 Score=110.67 Aligned_cols=141 Identities=20% Similarity=0.176 Sum_probs=107.0
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHH--HhhcchHHHHHHHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCL--TAFSPNYSTYVVLRMLT 191 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~--~~~~~~~~~l~~~r~l~ 191 (532)
.+++++|+ +..+.++..+...++..++.+++|+++|| +|||+.+.....+..++..+ ....++.+.+.+.+++.
T Consensus 284 yl~~~~g~---s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (467)
T PRK09556 284 YAFQELGF---SKEDAINTFTLFEIGALVGSLLWGWLSDL-ANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFAL 359 (467)
T ss_pred HHHHccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 45577899 99999999999999999999999999999 99998876655444443322 23345677777888888
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHH-HHHHHHHHHHHhh---------------chHHHHHHHHHHHH
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFST-GIALLSGIAYIFQ---------------TWRALYIASSIPSI 255 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~~~~l~~~l~---------------~wr~~f~~~~~~~~ 255 (532)
|++.............|.+|++.||++.++.+....+ |..++|.+.+.+. +|+..|++..+..+
T Consensus 360 G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~ 439 (467)
T PRK09556 360 GFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAI 439 (467)
T ss_pred HHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHH
Confidence 8654433333345666999999999999999888886 7678777766654 49999988877766
Q ss_pred HHH
Q 009563 256 LFL 258 (532)
Q Consensus 256 ~~~ 258 (532)
+..
T Consensus 440 ~~~ 442 (467)
T PRK09556 440 GCI 442 (467)
T ss_pred HHH
Confidence 655
No 159
>TIGR00895 2A0115 benzoate transport.
Probab=99.12 E-value=9.7e-10 Score=108.32 Aligned_cols=124 Identities=18% Similarity=0.153 Sum_probs=104.3
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+.+++|. +..+.+++.+...++..++.++.|++.|| +|||+.+....+......++....++.+.+++..++.|
T Consensus 274 ~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (398)
T TIGR00895 274 PKLMVELGF---SLSLAATGGALFNFGGVIGSIIFGWLADR-LGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAG 349 (398)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 556677888 88899999999999999999999999999 99995554444443333333333567778888899999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF 240 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l 240 (532)
++.+...+...+++.|.+|+++|+++.++......+|..++|.+++.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 350 FFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 999999999999999999999999999999999999999999998865
No 160
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.12 E-value=5.4e-10 Score=99.40 Aligned_cols=151 Identities=16% Similarity=0.133 Sum_probs=117.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc-------chHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS-------PNYSTYV 185 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~l~ 185 (532)
|++++.+|+ |..|...+.+.-.+|..+| ++.|.+.|+ +|++.++.+|.+...+|..+...+ .++|.+.
T Consensus 26 ~~Lk~~l~~---sq~~l~~l~~~~~~G~~~G-~~~G~l~d~-~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~ 100 (250)
T PF06813_consen 26 PQLKSRLGY---SQSQLNTLSTAGDIGSYFG-ILAGLLYDR-FGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMC 100 (250)
T ss_pred HHHHHHhCC---CHHHHHHHHHHHHHHhhcc-HHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHH
Confidence 899999999 9999999999999999874 889999999 999999999999999998777643 3678888
Q ss_pred HHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHhc
Q 009563 186 VLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--TWRALYIASSIPSILFLLIILP 263 (532)
Q Consensus 186 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--~wr~~f~~~~~~~~~~~~~~~~ 263 (532)
+..++.|.+.+....++.....+.+| ++||++.++.-...+++..+-..+...+. +-...+.+.+....+..++..+
T Consensus 101 ~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~ 179 (250)
T PF06813_consen 101 LFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMF 179 (250)
T ss_pred HHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh
Confidence 88888888887777777766678887 58999999999999999888666655544 3223333334333333335555
Q ss_pred ccccCc
Q 009563 264 FLPESP 269 (532)
Q Consensus 264 ~~~esp 269 (532)
+++..|
T Consensus 180 ~vr~~~ 185 (250)
T PF06813_consen 180 FVRPVP 185 (250)
T ss_pred heeccC
Confidence 555544
No 161
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.11 E-value=4.4e-09 Score=101.78 Aligned_cols=134 Identities=20% Similarity=0.250 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIY 453 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (532)
.........++..++.++.|+++||+|||+.+..+.++.+++.++..+. .+ .+ ..++..++.+++.+...+....+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~-~~-~~~~~~~l~g~~~~~~~~~~~~~ 109 (352)
T PF07690_consen 34 IGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA--SN-FW-LLLIARFLLGIGSGFFSPASNAL 109 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH--CC-HH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh--hh-HH-HHhhhcccccccccccccccccc
Confidence 4455555667788999999999999999999999999888885555543 22 22 56777888899999999999999
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH-hhcc
Q 009563 454 TTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA-FYLP 511 (532)
Q Consensus 454 ~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~ 511 (532)
+.|.+|+++|+++.++.+....+|..++|.+. ..++...|++.+++.++..++. ++++
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 173 (352)
T PF07690_consen 110 IADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLP 173 (352)
T ss_dssp HHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC-
T ss_pred ccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhh
Confidence 99999999999999999999999999999888 4456778888888888876643 3443
No 162
>PRK03699 putative transporter; Provisional
Probab=99.10 E-value=9.4e-10 Score=108.14 Aligned_cols=146 Identities=13% Similarity=0.122 Sum_probs=121.7
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhh
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFS 194 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 194 (532)
+++++|+ +..+.+++.+.+.++..++.++.|+++|| +|||+.+.....+..+...+....++.+.+.+..++.|++
T Consensus 232 l~~~~g~---s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 307 (394)
T PRK03699 232 AQKKFGM---SLEDAGNLVSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFF 307 (394)
T ss_pred HHHHcCC---ChHHhhHHHHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 3467899 99999999999999999999999999999 9999999988888777777777778887788888999998
Q ss_pred ccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 195 TGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 195 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
.+..++...++..|..| +++++..+.......+|..++|.+.+.+. ||+..+++.++..++.. +....++
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 380 (394)
T PRK03699 308 SSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVF-VMCILLG 380 (394)
T ss_pred HHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHH-HHHHHHH
Confidence 88888887777777765 45677788888888999999999998886 99999998888877766 3344444
No 163
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.10 E-value=6.8e-09 Score=102.48 Aligned_cols=136 Identities=16% Similarity=0.134 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
........++..++.+..|++.||+|||+.+..+.++..++.++..+..+.. ..++.-++.|++.+...+....++
T Consensus 46 g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~r~l~G~~~~~~~~~~~~~~ 121 (412)
T TIGR02332 46 GLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPE----SLYLLRILVGIAEAGFLPGILLYL 121 (412)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHH----HHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3444455567778889999999999999999999999888888887754432 456667788888888888888999
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHH-----------hhhhhHHHHHHHHHHHHHHHH-hhccCCC
Q 009563 455 TELFPTVVRNAALGCATQAAQLGAILAPFVVV-----------LGGWLPFAVFAACGIIGGLFA-FYLPETL 514 (532)
Q Consensus 455 ~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~~-----------~~~~~~~~~~~~~~~~~~~~~-~~l~~~~ 514 (532)
.|.+|+++|+++.++.+....+|..++|.+.. .++...|++.++..++..++. +++||+.
T Consensus 122 ~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 122 TFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 99999999999999999998899888887761 267788888777766554443 5667654
No 164
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.09 E-value=4.4e-09 Score=100.23 Aligned_cols=144 Identities=16% Similarity=0.119 Sum_probs=125.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFV 204 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 204 (532)
+...+|.+.++.-+.-++.-.+..++.+| +|.|+.++++..+..+=.++++++++.+.+.+.+.+.|+-.+........
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fk 335 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFK 335 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66789999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred eeecccCCCchhHHHHHH-HHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 205 LATEPVGPSKRGAAGMST-FYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 205 ~i~~~~~~~~r~~~~~~~-~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
|+++.+|+|..++...+. +.+.++|..+.+.++|.+. |.+..|++.+.+.++..++..+.+++.+
T Consensus 336 YI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 336 YITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 999999988887777774 6888899999888888887 8899999999998888878888777654
No 165
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.08 E-value=2.2e-08 Score=101.00 Aligned_cols=150 Identities=17% Similarity=0.156 Sum_probs=113.5
Q ss_pred CceeecccccchhhhHHHHHHH-HHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHH---hhc-chHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQA-LFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLT---AFS-PNYSTYVVL 187 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s-~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~ 187 (532)
|.+.+++|+ +..+.+++.. ...++..++.+++|+++|| +|+|+.+.++.++.+++.++. +.. ++.+.+.+.
T Consensus 247 ~~l~~~~G~---s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~ 322 (491)
T PRK11010 247 TFLIRGVGF---DAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAA 322 (491)
T ss_pred HHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 334567899 9999999974 6678999999999999999 999998877666555544322 333 455555556
Q ss_pred HHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcc
Q 009563 188 RMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 188 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
-++..+..|...+...++..+..+++.+++..++.+...++|..+++.+.+.+. ||+..|.+.++.+++.. +...+
T Consensus 323 ~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l-~~~~~ 401 (491)
T PRK11010 323 VFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGL-LLLLV 401 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH-HHHHH
Confidence 666565556556667788889999999999999999999999888877777776 89999998888888766 44444
Q ss_pred ccc
Q 009563 265 LPE 267 (532)
Q Consensus 265 ~~e 267 (532)
+++
T Consensus 402 ~~~ 404 (491)
T PRK11010 402 CRQ 404 (491)
T ss_pred HHh
Confidence 444
No 166
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.08 E-value=1.4e-08 Score=99.56 Aligned_cols=134 Identities=19% Similarity=0.176 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcc
Q 009563 376 LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTT 455 (532)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (532)
.......++..++.++.|.+.||+|||+.+..+..+.+++.+...+..+.. ..++.-++.+++.+...+...+++.
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~r~l~G~~~g~~~~~~~~~i~ 134 (394)
T PRK10213 59 QSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFS----LLLIGRACLGLALGGFWAMSASLTM 134 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHH----HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 333455667778899999999999999999999999988887776653322 4566677888888888899999999
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH-hhccCC
Q 009563 456 ELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA-FYLPET 513 (532)
Q Consensus 456 ~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 513 (532)
|.+|+++|+.+.++......+|..++|.+. ..++...|++.+++.++..+.. ..+||+
T Consensus 135 ~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 135 RLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999999998889988888887 3467777777776655544433 345654
No 167
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.08 E-value=8e-09 Score=101.57 Aligned_cols=135 Identities=22% Similarity=0.215 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccc
Q 009563 377 NVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTE 456 (532)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (532)
......++..++.++.|+++||+|||+.+..+..+..++.+......+.. ..++..++.+++.+...+....++.|
T Consensus 43 ~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~----~~~~~~~l~g~~~~~~~~~~~~~i~~ 118 (392)
T PRK10473 43 AFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSS----LFLAGRFLQGIGAGCCYVVAFAILRD 118 (392)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHH----HHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 34445566778889999999999999999998888888877766544322 34455667777777778888999999
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH-hhccCCCC
Q 009563 457 LFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA-FYLPETLN 515 (532)
Q Consensus 457 ~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~ 515 (532)
.+|+++|+++.++.+....++..++|.+. ..++...+++.+++.++..++. +.+||+++
T Consensus 119 ~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 119 TLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRP 183 (392)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999998888888888776 2345666777776666655543 45666543
No 168
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.08 E-value=5.6e-09 Score=102.19 Aligned_cols=135 Identities=10% Similarity=0.020 Sum_probs=114.1
Q ss_pred ecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhcc
Q 009563 117 TQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTG 196 (532)
Q Consensus 117 ~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 196 (532)
+|.|. +..+.|.+.+...++..+..++.|++.|| +|+|+.+..+.++.+++.++.+++++.+.+++..++.|++.+
T Consensus 233 ~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 308 (382)
T PRK11128 233 QAAGY---SASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFT 308 (382)
T ss_pred HHCCC---CHhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 56788 88899999999999999999999999999 999999999999999988888889999999999999999999
Q ss_pred ccchhhhheeecccCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHH
Q 009563 197 GVGLCAFVLATEPVGPSKRGAAGMSTF-YFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILF 257 (532)
Q Consensus 197 ~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~ 257 (532)
...+....++.+. +++++++..+... ....+|..+|+.++|.+. |+ ..|+..+++.++.
T Consensus 309 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 309 VCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 8888888888886 5566788888775 556788889999999887 55 4555555555443
No 169
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.07 E-value=7.6e-09 Score=101.53 Aligned_cols=137 Identities=19% Similarity=0.248 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
........++..++.++.|++.||+|||+.+..+.++..++.+......+.. ...+..++.+++.+...+...+++
T Consensus 43 g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~g~~~~~~~~~~~~~~ 118 (385)
T TIGR00710 43 QMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIE----TLLVLRFVQAFGASAGSVISQALV 118 (385)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH----HHHHHHHHHHcchhHHHHHHHHHH
Confidence 4444555677788999999999999999999999888888887776654322 455667778888888888999999
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH-hhccCCCC
Q 009563 455 TELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA-FYLPETLN 515 (532)
Q Consensus 455 ~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~ 515 (532)
.|.+|+++|+++.++.+....+|..++|.+. ..++...+++.+++.++..+.. +..||+++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 119 RDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999988888777 3456677777776666655544 34565543
No 170
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.07 E-value=6.9e-09 Score=105.35 Aligned_cols=138 Identities=18% Similarity=0.132 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchh--HHHHHHHHHHHHHHHHhhhhhHhhh
Q 009563 376 LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIW--KIVRMICGVMGIFGVAGTYNLLFIY 453 (532)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (532)
.......++.+++.++.+++.||+|||+.+..+.++..++.++..+..+.... ....++.-++.|++.+..++....+
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~ 139 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAII 139 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 44555667888999999999999999999999888888887776665432111 1256677788899999999999999
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHHH----------------------------hhhhhHHHHHHHHHHHHHH
Q 009563 454 TTELFPTVVRNAALGCATQAAQLGAILAPFVVV----------------------------LGGWLPFAVFAACGIIGGL 505 (532)
Q Consensus 454 ~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~~----------------------------~~~~~~~~~~~~~~~~~~~ 505 (532)
+.|.+|++.|+++.++.+....+|..+++.+.. .++...+.+.++..++..+
T Consensus 140 ~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~ 219 (502)
T TIGR00887 140 TSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY 219 (502)
T ss_pred HHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888888776651 1345555555555555555
Q ss_pred HHhhccCC
Q 009563 506 FAFYLPET 513 (532)
Q Consensus 506 ~~~~l~~~ 513 (532)
..+++||+
T Consensus 220 ~~~~lpES 227 (502)
T TIGR00887 220 FRLTIPET 227 (502)
T ss_pred HHHhCCCC
Confidence 55678886
No 171
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.06 E-value=3.2e-09 Score=103.21 Aligned_cols=152 Identities=20% Similarity=0.144 Sum_probs=115.2
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc---hHH------H
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP---NYS------T 183 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~---~~~------~ 183 (532)
..+-++-|+ +..+.-+......+...++.+.+..+.|| +|||+.++.+..+..+..++..... +.. .
T Consensus 294 t~i~~~aG~---~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~ 369 (485)
T KOG0569|consen 294 TSIFKTAGF---TPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYL 369 (485)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 456677788 88888999999999999999999999999 9999999999999998887776542 111 1
Q ss_pred HHHHHHHHHhhcc-ccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHH
Q 009563 184 YVVLRMLTGFSTG-GVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLL 259 (532)
Q Consensus 184 l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~ 259 (532)
.+++.++..++.+ +.-|...-+.+|.+|++.|..++++.....-+...+-...-..+. |= +.|++..+++++..+
T Consensus 370 ~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i 448 (485)
T KOG0569|consen 370 CIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLI 448 (485)
T ss_pred HHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHH
Confidence 2333333333222 236677889999999999999999888877777665444333333 33 778888888888888
Q ss_pred HHhcccccCc
Q 009563 260 IILPFLPESP 269 (532)
Q Consensus 260 ~~~~~~~esp 269 (532)
..++++|||.
T Consensus 449 ~~~~~lPETk 458 (485)
T KOG0569|consen 449 YLYRYLPETK 458 (485)
T ss_pred HHHHhCcccC
Confidence 9999999994
No 172
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.06 E-value=1.7e-08 Score=100.89 Aligned_cols=116 Identities=18% Similarity=0.187 Sum_probs=99.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHhhccccchhhh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS-PNYSTYVVLRMLTGFSTGGVGLCAF 203 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~ 203 (532)
+..+.+++.++..++..++.+++++++|| +|+|+++.++.++.+++.++..+. ++.+.+++..++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788888899999999999999999 999999999998888887777665 4667778888999999999999889
Q ss_pred heeecccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 204 VLATEPVG-------PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 204 ~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
++++|..+ ++.+|...++.+....+|..+++.+.+.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll 378 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLIL 378 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888765 456799999999999999999999888775
No 173
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.06 E-value=9.9e-09 Score=100.63 Aligned_cols=133 Identities=16% Similarity=0.082 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
........+...+..++.|++.||+|||+++..+..+..++.+.+....+ . ++.-++.+++.+...|...+++
T Consensus 41 ~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~------~-~~~r~l~G~~~a~~~pa~~a~i 113 (393)
T PRK11195 41 PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIH------P-LLAYGLVGIGAAAYSPAKYGIL 113 (393)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHH------H-HHHHHHHHHHHHHHHHHHHHHH
Confidence 33344555677788999999999999999999998888777666544322 1 3344567888889999999999
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHH----HhhhhhHHHHHHHHHHHHHHHHhhccCCC
Q 009563 455 TELFPTVVRNAALGCATQAAQLGAILAPFVV----VLGGWLPFAVFAACGIIGGLFAFYLPETL 514 (532)
Q Consensus 455 ~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 514 (532)
.|.+|+++|+++.|+.+....++..+||.+. ...+...+.+.+.+.+++.+....+||.+
T Consensus 114 ~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 114 TELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9999999999999999999999999999887 22233333333333333444445666543
No 174
>TIGR00898 2A0119 cation transport protein.
Probab=99.05 E-value=5.1e-09 Score=106.69 Aligned_cols=134 Identities=16% Similarity=0.068 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchH--HHHHHHHHHHHhhccccchhhhheeecccC
Q 009563 134 ALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNY--STYVVLRMLTGFSTGGVGLCAFVLATEPVG 211 (532)
Q Consensus 134 s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 211 (532)
....+....+.++.+++.|| +|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+...+....+..|.+|
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDR-LGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 34456677888999999999 999999999999999988888776643 455566677777777788888999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 212 PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ-TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 212 ~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
.+.|++++++......+|.+++|.+.+... ++..++++.++..++.. +..+++||+.
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lpet~ 498 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAG-ILTLFLPETK 498 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHH-HHHHcCcCCC
Confidence 999999999999999999999999988322 66778888887777766 5556788874
No 175
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.05 E-value=9.5e-09 Score=102.90 Aligned_cols=144 Identities=17% Similarity=0.147 Sum_probs=99.3
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC--CchHHH-HHHHHHHHHHHHHHhh--cchHHHHHHHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRL--GRKGSL-TVVCMMNAVFGCLTAF--SPNYSTYVVLRM 189 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~--Grr~~l-~~~~~~~~~~~~~~~~--~~~~~~l~~~r~ 189 (532)
+++++|. +..+.+++.+.+.++..++.++.|+++|| + |||+.. .....+..++.++..+ ..+.+..++..+
T Consensus 280 l~~~~g~---s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 355 (452)
T PRK11273 280 LKEVKHF---ALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMI 355 (452)
T ss_pred HHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHH
Confidence 4455788 88889999999999999999999999999 8 555432 2223333333332222 234555555556
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHH-HHHHHHHhh---chHHHHHHHHHHHHHHHHHHh
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIAL-LSGIAYIFQ---TWRALYIASSIPSILFLLIIL 262 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~ 262 (532)
+.|.+..........+..|.+|+++||++.++.+....+|..+ +|.+.+.+. ||+..|++.++.+++.++...
T Consensus 356 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 356 VIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 6665433323333445679999999999999998888887654 788877776 899999988877776654443
No 176
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.05 E-value=2.6e-08 Score=97.91 Aligned_cols=163 Identities=13% Similarity=0.107 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcc-ccCcchHHHHHH---HHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhh
Q 009563 347 FLAVTINFLCSVVYYGISLNV-VNLQTNLYLNVL---VNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLV 422 (532)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~ 422 (532)
...++........+...+.+. ++.+.+...... ...+...+..++.|+++||+|||+.+..+..+..++.+.+...
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~ 96 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA 96 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh
Confidence 333344444444443444333 334444433333 3344555667889999999999999999999999888887665
Q ss_pred hccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH----HhhhhhHHHHHHH
Q 009563 423 KNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV----VLGGWLPFAVFAA 498 (532)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~~~~~~~~~~~~~ 498 (532)
++ .+ ..++..++.+++.+...+...+++.+.+|+++|+++.|+.+....+|..++|.+. ..++...|++.++
T Consensus 97 ~~--~~--~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~ 172 (400)
T PRK11646 97 HE--PW--LLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAV 172 (400)
T ss_pred cc--HH--HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 32 22 3455666777777777788889999999999999999999999999999988877 4456667777766
Q ss_pred HHHHHHHHH-hhccCC
Q 009563 499 CGIIGGLFA-FYLPET 513 (532)
Q Consensus 499 ~~~~~~~~~-~~l~~~ 513 (532)
..++..++. +++||.
T Consensus 173 ~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 173 LFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHhCCcc
Confidence 665554443 445553
No 177
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.04 E-value=1.8e-08 Score=101.35 Aligned_cols=130 Identities=15% Similarity=0.086 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcccc
Q 009563 378 VLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTEL 457 (532)
Q Consensus 378 ~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (532)
.....++..++.++.|++.||+|||+++..+.++..++.++..+..+.. ..++..++.|++.+.. .....++.|.
T Consensus 77 ~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~----~l~~~r~l~G~~~~~~-~~~~~~i~~~ 151 (476)
T PLN00028 77 GIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSAT----GFIAVRFFIGFSLATF-VSCQYWMSTM 151 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHhh-HHHHHHHHHh
Confidence 3445566778899999999999999999888888887777666654332 3344455666665543 3345578899
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHH----H----------hhhhhHHHHHHHHHHHHHHHHhhccC
Q 009563 458 FPTVVRNAALGCATQAAQLGAILAPFVV----V----------LGGWLPFAVFAACGIIGGLFAFYLPE 512 (532)
Q Consensus 458 ~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~----------~~~~~~~~~~~~~~~~~~~~~~~l~~ 512 (532)
+|++.|+.+.|+.+....+|+.+++.+. . .++...|++.+++.++..++.+++++
T Consensus 152 ~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 152 FNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred cChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999877777766654433 1 25777888888877776666555543
No 178
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.03 E-value=9.6e-09 Score=102.28 Aligned_cols=148 Identities=23% Similarity=0.209 Sum_probs=102.8
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC--Cc-hHHHHH---HHHHHHHHHHHHhhcchHHHHHHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRL--GR-KGSLTV---VCMMNAVFGCLTAFSPNYSTYVVLR 188 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~--Gr-r~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r 188 (532)
+.+++|+ +..+.++..+.+.++..++.++.|+++|| + ++ |..... +.++..++..+.. ..+...+.+..
T Consensus 270 l~~~~g~---s~~~a~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 344 (434)
T PRK11663 270 MSETLGV---DLVTANSAVSMFELGGFIGALVAGWGSDK-LFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACF 344 (434)
T ss_pred HHhccCC---CHHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHH
Confidence 3467888 89999999999999999999999999999 8 33 332222 2121211111122 23344444445
Q ss_pred HHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhccc
Q 009563 189 MLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFL 265 (532)
Q Consensus 189 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~ 265 (532)
+..|++..........++.|.+|+++|++..++.+....+|..++|.+.+.+. ||+..|++.+++.++..+..+...
T Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 345 FTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred HHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555433222233456689999999999999999999999999999888876 899999999888877765554444
Q ss_pred cc
Q 009563 266 PE 267 (532)
Q Consensus 266 ~e 267 (532)
++
T Consensus 425 ~~ 426 (434)
T PRK11663 425 NA 426 (434)
T ss_pred hh
Confidence 43
No 179
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.02 E-value=7.4e-09 Score=103.08 Aligned_cols=125 Identities=18% Similarity=0.122 Sum_probs=95.0
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc--hHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP--NYSTYVVLRML 190 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l 190 (532)
|...++.|. +..+.+.+.+...++..++.++.|++.|| +|||+.+..+.++..+..++....+ +...+.+..+.
T Consensus 255 ~~~~~~~g~---~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (426)
T PRK12307 255 PTYLAGEGF---DTGVVSNLMTAAAFGTVLGNIVWGLCADR-IGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFG 330 (426)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHH
Confidence 444456677 88889999999999999999999999999 9999999988887776655544332 22222222223
Q ss_pred HHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 191 TGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 191 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
.+++..+..+..+.++.|.+|+++|++++++......+|..++|.+.+++.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~ 381 (426)
T PRK12307 331 LMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLG 381 (426)
T ss_pred HHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHH
Confidence 333333334556678899999999999999999999999999999998887
No 180
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.02 E-value=4.6e-09 Score=118.15 Aligned_cols=140 Identities=19% Similarity=0.193 Sum_probs=120.3
Q ss_pred ceeecccccchhhh-HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 114 STVTQWGLFCEEKY-KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 114 ~i~~~~~~~~~s~~-~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
.+.+++|+ +.. +.+++.+...++.+++.+++|++.|| +++|+.+.++.++.+++.++..+..+.+.+++..++.|
T Consensus 258 ~~~~~~g~---s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 333 (1146)
T PRK08633 258 YAKEVLGL---DNTFQVQYLLAASAIGIGIGSLLAGRLSGR-HIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFG 333 (1146)
T ss_pred HHHHHhCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 34566888 788 99999999999999999999999999 99999999999999888888888889999999999999
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHH
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILF 257 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~ 257 (532)
++.+...+...+++.+..|++.||+++++.+....+|.++++.+++.+. ++...|++.+.+.++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 334 FSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIG 402 (1146)
T ss_pred HHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 9999999989999999999999999999999999999988887777664 4555666555544443
No 181
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.01 E-value=6.8e-09 Score=104.06 Aligned_cols=134 Identities=11% Similarity=-0.008 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-hCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDK-LGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFI 452 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~-~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (532)
.........++..++.+++|+++|| +|||+++..+.++.+++.+++.+..+.. ..++...+.+++.+...+...+
T Consensus 50 ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~----~~~~~~~l~g~g~g~~~~~~~~ 125 (475)
T TIGR00924 50 AFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPD----LIFYGLGTIAVGSGLFKANPSS 125 (475)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHh----HHHHHHHHHHhccccccCCHHH
Confidence 3444455566778899999999999 8999999999999998888777654321 3445556677777778888889
Q ss_pred hccccccchh---hhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHhhcc
Q 009563 453 YTTELFPTVV---RNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAFYLP 511 (532)
Q Consensus 453 ~~~~~~p~~~---r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ 511 (532)
++.+.+|++. |+++.++.+...++|.+++|.+. ..++...|.+.++..+++.+..++.+
T Consensus 126 ~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 126 MVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999998654 88899999999999999998887 34677777777665555544444433
No 182
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.00 E-value=7.2e-09 Score=102.40 Aligned_cols=127 Identities=13% Similarity=0.080 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh-CCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccc
Q 009563 378 VLVNAVAEMPAFTITAVLLDKL-GRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTE 456 (532)
Q Consensus 378 ~~~~~~~~~~~~~~~~~l~d~~-gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (532)
.........++.+++|+++||+ |||+.+.++.++..++.+++........ ...+...+..++.+...+...+++.|
T Consensus 51 ~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~---~~~l~l~li~iG~G~~~~~~~alv~e 127 (493)
T PRK15462 51 FSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPS---FLYLSLAIIVCGYGLFKSNVSCLLGE 127 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchh---HHHHHHHHHHHhcccccccHHHHHHH
Confidence 3444455667888999999998 9999999999998888766654321111 22333334445556666777889999
Q ss_pred cccch--hhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH
Q 009563 457 LFPTV--VRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 457 ~~p~~--~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
.+|++ .|.++.++.+...++|+.++|.+. ..|+...|.+.++..+++.+..
T Consensus 128 lfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 128 LYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHH
Confidence 99875 689999999999999999999888 3467777777665555444443
No 183
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.00 E-value=2.6e-08 Score=97.49 Aligned_cols=136 Identities=12% Similarity=0.033 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
........++..++.++.|++.||+|||+.+..+..+.+++.++..+.++.. ..++..++.+++.+...+....++
T Consensus 41 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~----~l~~~r~l~G~~~~~~~~~~~~~~ 116 (382)
T PRK10091 41 GHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYL----MLAIGRLVSGFPHGAFFGVGAIVL 116 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHH----HHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3445556678889999999999999999999999999988888777665432 455666788888887778888888
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH-hhccCCC
Q 009563 455 TELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA-FYLPETL 514 (532)
Q Consensus 455 ~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~ 514 (532)
.|.+|+++|+.+.++......+|..++|.+. ..++.+.|.+.+++.++..+.. .++||.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 117 SKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999888888888887765 3467778888777666554433 4567643
No 184
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.00 E-value=1.3e-08 Score=83.84 Aligned_cols=124 Identities=23% Similarity=0.334 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccch
Q 009563 382 AVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTV 461 (532)
Q Consensus 382 ~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 461 (532)
.++.+++.++.+++.||+|||+.+..+..+..++.+......+.. ...+..++.+++.+...+....++.|.+|++
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNIT----VLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHH----HHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 456778899999999999999999888888877777665543221 4556677788888888889999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHhh
Q 009563 462 VRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAFY 509 (532)
Q Consensus 462 ~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
.|+++.++.+....+|..++|.+. ..++...+.+.+.+.+++.+...+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999988877 233456667666666665555443
No 185
>PRK10504 putative transporter; Provisional
Probab=98.99 E-value=9.6e-09 Score=103.69 Aligned_cols=120 Identities=13% Similarity=0.121 Sum_probs=103.1
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc---chHHHHHHHHHHHHhh
Q 009563 118 QWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS---PNYSTYVVLRMLTGFS 194 (532)
Q Consensus 118 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~ 194 (532)
.+|. +..+.+++.....++..++.++.|++.|| +|||+++..+.++.+++..+..+. ++.+.+.+..++.|++
T Consensus 291 ~~g~---~~~~~g~~~~~~~~~~~~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 366 (471)
T PRK10504 291 GLGF---SPFHAGLMMIPMVLGSMGMKRIVVQVVNR-FGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMV 366 (471)
T ss_pred HcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHH
Confidence 4677 88899999999999999999999999999 999999999998888877666553 3444455667888888
Q ss_pred ccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 195 TGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 195 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
.+...+....++.+..|+++|+...++.+....+|..+|+.+++.+.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll 413 (471)
T PRK10504 367 NSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLL 413 (471)
T ss_pred HHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999999999999988775
No 186
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.99 E-value=6e-09 Score=97.20 Aligned_cols=148 Identities=17% Similarity=0.130 Sum_probs=132.5
Q ss_pred eecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhc
Q 009563 116 VTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFST 195 (532)
Q Consensus 116 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 195 (532)
+.++|+ +..+..++.-...+..++|++++|++.|| +|.|+++.++.++..+.++..-+...-..+.+.-.+.|+..
T Consensus 280 ~~~~gl---s~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~ 355 (438)
T COG2270 280 AADLGL---SSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSL 355 (438)
T ss_pred HHHcCc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhc
Confidence 458999 99999999999999999999999999999 99999999999999999999888887777888889999999
Q ss_pred cccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhcccccC
Q 009563 196 GGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFLPES 268 (532)
Q Consensus 196 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~~es 268 (532)
|+.+..+.+|..+..|+++-++.+|++....-.+..+||.+-+.+. +-|..+....++.++.+ +.++.+|+.
T Consensus 356 G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl-~~L~~v~~~ 431 (438)
T COG2270 356 GGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGL-LLLLRVKVP 431 (438)
T ss_pred chHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhH-hhEEeecCC
Confidence 9999999999999999999999999999999999999999988887 77777777666666655 666666654
No 187
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.98 E-value=7.6e-09 Score=96.39 Aligned_cols=133 Identities=17% Similarity=0.056 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIY 453 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (532)
.+.......+..-++-++.|.++||.+.|+.+.++.+++++..+++++..+.. ++.++.++.+++.+..+|.....
T Consensus 66 lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~----~~~~l~~lng~fQg~Gwpp~~~~ 141 (448)
T COG2271 66 LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLF----LFAVLWVLNGWFQGMGWPPCART 141 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHH----HHHHHHHHHHHHhcCCCcHHHHH
Confidence 34444555566668999999999999999999999999999999999887432 67788889999999999999999
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHH-------HhhhhhHHHHHHHHHHHHHHHHhhc
Q 009563 454 TTELFPTVVRNAALGCATQAAQLGAILAPFVV-------VLGGWLPFAVFAACGIIGGLFAFYL 510 (532)
Q Consensus 454 ~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l 510 (532)
+..-+|+++||+..++-|+..++|+.+.|.+. ..++...|++-+++.++..++.+++
T Consensus 142 i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 142 ITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred HHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988877666 2256778888888888776666544
No 188
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.98 E-value=8.1e-09 Score=103.00 Aligned_cols=149 Identities=15% Similarity=0.075 Sum_probs=102.0
Q ss_pred eecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHH---HHHHHHhh--cchHHHHHHHHHH
Q 009563 116 VTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNA---VFGCLTAF--SPNYSTYVVLRML 190 (532)
Q Consensus 116 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~---~~~~~~~~--~~~~~~l~~~r~l 190 (532)
++..|. +..+.++..+.+.++..++.++.|+++|| +|+++....+..+.. ++.+.... ..+.+...+..++
T Consensus 279 ~~~~g~---s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (438)
T TIGR00712 279 KEVKHF---ALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIV 354 (438)
T ss_pred HHccCC---ChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 345688 88899999999999999999999999999 865432223332221 11121112 2234444444555
Q ss_pred HHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHH-HHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 191 TGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTG-IALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 191 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G-~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
.|++.............|.+|+++|+++.++.+....+| .+++|.+.+.+. ||...|++..+..++..+..++.+|
T Consensus 355 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 355 IGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred HHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 565433322222345679999999999999998877776 568888888776 8999998888877777767777777
Q ss_pred cC
Q 009563 267 ES 268 (532)
Q Consensus 267 es 268 (532)
|.
T Consensus 435 ~~ 436 (438)
T TIGR00712 435 GE 436 (438)
T ss_pred hc
Confidence 75
No 189
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.98 E-value=3.8e-08 Score=92.90 Aligned_cols=145 Identities=21% Similarity=0.186 Sum_probs=122.8
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF-SPNYSTYVVLRMLT 191 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~ 191 (532)
|.+++..|+ |...++++.-+|.++..+|+++.|+++|| +.|+.+.....+..+..+...+ .++.+..++.-++.
T Consensus 236 P~L~~v~g~---s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~w 310 (394)
T COG2814 236 PFLESVAGF---SVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALALLALTFTGASPALALALLFLW 310 (394)
T ss_pred HHHHHccCC---CHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 788888999 99999999999999999999999999997 8888888887777776666554 45667777778889
Q ss_pred HhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhc
Q 009563 192 GFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILP 263 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~ 263 (532)
|++.+.........+++ ..++.++.+.++....+++|..+|..+++.+. |+....++.+++.++..++.++
T Consensus 311 g~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 311 GFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred HHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 99888877777777777 55688999999999999999999999999987 8999999999888887744443
No 190
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.98 E-value=1.2e-05 Score=77.89 Aligned_cols=334 Identities=12% Similarity=0.022 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHh------hc--c-----h--HHHHHHHHHHHHhh
Q 009563 130 GLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTA------FS--P-----N--YSTYVVLRMLTGFS 194 (532)
Q Consensus 130 ~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~------~~--~-----~--~~~l~~~r~l~G~~ 194 (532)
+...-+-.+..++.++..|.+.|| ..|.+++..+.+..-++..+.+ +. + + ...+++.-.+.|.-
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~-~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDR-SPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhC-CcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence 333334455667788889999999 8999987776544333322221 11 1 1 11222222222221
Q ss_pred ccccc-hhhhheeecccC------CCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHhcc
Q 009563 195 TGGVG-LCAFVLATEPVG------PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 195 ~~~~~-~~~~~~i~~~~~------~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
.-... ....++=.||.. ++.+.+..+...-.=-+..+++|++.+.+. +.+...++.++..++..++-+++
T Consensus 120 ~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 120 ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 112233344542 344555666666666677889999888886 66766666666666655444443
Q ss_pred ccc----CchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcCh
Q 009563 265 LPE----SPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKSP 340 (532)
Q Consensus 265 ~~e----sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (532)
+.. .|. +..+++.++ .+...++++..+........+...+........++..++.+
T Consensus 200 l~~VY~~~P~-L~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~ 259 (432)
T PF06963_consen 200 LARVYNSVPA-LAVKKRSSE-------------------SESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQP 259 (432)
T ss_pred HHHHHHhChH-hcCCCCCcc-------------------ccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCH
Confidence 321 111 100000000 00000000000000001111111122223345677788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCcchH---HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHH
Q 009563 341 LTRIRLFLAVTINFLCSVVYYGISLNVVNLQTNL---YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCL 417 (532)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~ 417 (532)
.+...+-..+++....++......+. ...+.+. +..-...++.++.|+++..++.+|+|..+.-.++......+..
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl-~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~ 338 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYL-KSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLA 338 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence 66655554444444333222222222 1223332 3333455677888999999999999988877766664443333
Q ss_pred HHH---hhhccc---hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 418 LGS---LVKNNG---IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 418 ~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+.. +.+..+ .....++.+..+.-+|.-+.--...-++.|..|+++||+..|+-+...++...+.-.+.
T Consensus 339 ~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 339 LCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 222 222221 12223444445555555555556778899999999999999999999887766554444
No 191
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.97 E-value=2.2e-08 Score=98.37 Aligned_cols=141 Identities=12% Similarity=0.080 Sum_probs=107.8
Q ss_pred ceeecccccchhhhHHHHHHHHHH-HHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh------cchHHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFF-FGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF------SPNYSTYVV 186 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~-l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~~ 186 (532)
...+|.|+ +..++|++..... .+..++.++.|++.|| +|+|+.+..+.++.++..+.... .++...+..
T Consensus 233 ~~l~~~G~---s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (390)
T TIGR02718 233 LYLVDAGW---PLEWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWS 308 (390)
T ss_pred HHHHhcCC---CHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHH
Confidence 34456799 9999999988876 4667789999999999 99999998877765333332221 233444455
Q ss_pred HHHHHHhhccccchhhhheeecccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHH
Q 009563 187 LRMLTGFSTGGVGLCAFVLATEPVGP-SKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFL 258 (532)
Q Consensus 187 ~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~ 258 (532)
...+.+++.+...+...+.+.+..++ +++++.+++.+...++|..+++.+++.+. ||+..|++.+++.++..
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 309 CSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 56666777777777777777777766 88999999999999999999999999886 88899988877766654
No 192
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.97 E-value=2.8e-08 Score=98.20 Aligned_cols=139 Identities=13% Similarity=0.052 Sum_probs=109.5
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc-----chHHHHHHHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS-----PNYSTYVVLRM 189 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~ 189 (532)
+.+++|+ ++.+.++......++..++.++.|+++|| +|+|+.+.++.++..++.++.++. ++.+.+++..+
T Consensus 242 ~~~~~g~---~~~~~g~~~~~~~~~~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK15402 242 LISGEQL---SSYEYGLLQVPVFGALIAGNLTLARLTSR-RPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLS 317 (406)
T ss_pred HHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 3466888 88899998888888999999999999999 999999999988887777766543 35677788899
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHH
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFL 258 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~ 258 (532)
+.|++.+...+......... ++++||+..+..+....+|..+|+.+++.+. +|....+..++..++..
T Consensus 318 ~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 388 (406)
T PRK15402 318 LYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWL 388 (406)
T ss_pred HHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHH
Confidence 99999988777665554333 4589999999999999999999999999876 55554444444444443
No 193
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.97 E-value=2e-08 Score=101.90 Aligned_cols=153 Identities=19% Similarity=0.205 Sum_probs=114.0
Q ss_pred HHHHHHhhhccccCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q 009563 357 SVVYYGISLNVVNLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRM 433 (532)
Q Consensus 357 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (532)
.......+....+.+. +.........++..++.++.|++.||+|||+.+..+..+..++.++....++.. ..+
T Consensus 19 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~----~l~ 94 (485)
T TIGR00711 19 TIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLE----LMI 94 (485)
T ss_pred HHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHH----HHH
Confidence 3334444554444443 234445566678888999999999999999999999998888888777654332 456
Q ss_pred HHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH-
Q 009563 434 ICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA- 507 (532)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~- 507 (532)
+..++.+++.+...+...+++.|.+|++.|+++.++......+|..++|.+. ..++.+.|++.+.+.++..++.
T Consensus 95 ~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 174 (485)
T TIGR00711 95 IFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAF 174 (485)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHH
Confidence 6777888888888899999999999999999999999999999998888876 3456677777666665554444
Q ss_pred hhccCC
Q 009563 508 FYLPET 513 (532)
Q Consensus 508 ~~l~~~ 513 (532)
+++|++
T Consensus 175 ~~~~~~ 180 (485)
T TIGR00711 175 FILPRD 180 (485)
T ss_pred HHcCCc
Confidence 445554
No 194
>PRK15075 citrate-proton symporter; Provisional
Probab=98.96 E-value=1.3e-08 Score=101.37 Aligned_cols=125 Identities=17% Similarity=0.110 Sum_probs=90.7
Q ss_pred Cce-eecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHH-H---hhcchHHHHHHH
Q 009563 113 SST-VTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCL-T---AFSPNYSTYVVL 187 (532)
Q Consensus 113 ~~i-~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~-~---~~~~~~~~l~~~ 187 (532)
|.+ ++.+|+ +..+.++....+.++..++.+++|+++|| +|||+.+..+.++..+..+. . ...+++..+.+.
T Consensus 262 p~~l~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (434)
T PRK15075 262 PTFGKTVLHL---SAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAV 337 (434)
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 443 344788 88888999999999999999999999999 99999888765544332211 1 123444445555
Q ss_pred HHHHHhhccccchhhhheeecccCCCchhHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 009563 188 RMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFY-FFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 188 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~~~~l~~~l~ 241 (532)
.++.|++.+...+....++.|.+|+++|+...++... +..++..++|.+.+.+.
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~ 392 (434)
T PRK15075 338 ELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLI 392 (434)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHH
Confidence 6666777776666667888999999999999998544 44445667888887765
No 195
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.96 E-value=6.5e-08 Score=95.54 Aligned_cols=135 Identities=17% Similarity=0.199 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccc
Q 009563 377 NVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTE 456 (532)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (532)
......++..++.++.|+++||+|||+++..+..+..++.++.....+.. ..++.-++.|++.+...+....++.|
T Consensus 56 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~----~l~~~r~l~Gi~~~~~~~~~~~~~~~ 131 (413)
T PRK15403 56 SVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMT----QFLIARFIQGTSICFIATVGYVTVQE 131 (413)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444567778899999999999999999999888888877776654332 45556666777666555666788889
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH-hhccCCCC
Q 009563 457 LFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA-FYLPETLN 515 (532)
Q Consensus 457 ~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~ 515 (532)
.+|++.++++.++.+....++..++|.+. ..++...|++.+++.+++.+.. +.+||+++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 132 AFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999888888888777 3467788888888777766553 45777643
No 196
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.96 E-value=5.5e-08 Score=98.54 Aligned_cols=153 Identities=16% Similarity=0.094 Sum_probs=110.8
Q ss_pred HHHHHHhhhccccCcc---hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q 009563 357 SVVYYGISLNVVNLQT---NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRM 433 (532)
Q Consensus 357 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (532)
+......+....+.+. +..+......++...+.+..|+++||+|||+.+..+..+..++.++..+.++.. ..+
T Consensus 23 tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~----~li 98 (495)
T PRK14995 23 TVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTAS----WLI 98 (495)
T ss_pred HHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHH----HHH
Confidence 3344444544444443 233444445566677888999999999999999999999998888877765433 455
Q ss_pred HHHHHHHHHHHhhhhhHhhhccccc-cchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH
Q 009563 434 ICGVMGIFGVAGTYNLLFIYTTELF-PTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
+.-++.+++.+...+.....+.+.+ |+++|+++.|+......+|..++|.+. ..++.+.|++...+.++..++.
T Consensus 99 ~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~ 178 (495)
T PRK14995 99 ATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLT 178 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHH
Confidence 6667888888888887777666665 778999999999999999999999887 3467778887766666555444
Q ss_pred -hhccCC
Q 009563 508 -FYLPET 513 (532)
Q Consensus 508 -~~l~~~ 513 (532)
.++|+.
T Consensus 179 ~~~l~~~ 185 (495)
T PRK14995 179 ARYVPRQ 185 (495)
T ss_pred HHhCCCC
Confidence 455654
No 197
>PRK09848 glucuronide transporter; Provisional
Probab=98.96 E-value=8.3e-08 Score=96.09 Aligned_cols=123 Identities=12% Similarity=0.070 Sum_probs=100.0
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc--hHHHHHHHHHHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP--NYSTYVVLRMLTG 192 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G 192 (532)
+++.+|. ++...++......++..++.++++++.|| +|+|+++.++.++..++.++..+.+ +++.+++..++.|
T Consensus 255 ~~~~~g~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g 330 (448)
T PRK09848 255 VRYVLND---TGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIAS 330 (448)
T ss_pred EeeecCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHH
Confidence 3445676 66555555555577788899999999999 9999999999999888887777653 6777778888999
Q ss_pred hhccccchhhhheeecccCCC-------chhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 193 FSTGGVGLCAFVLATEPVGPS-------KRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
+|.+...+...+++.|..+.+ ++|...++.+....+|..+++.+.+.+.
T Consensus 331 ~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 331 IGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998888654 4588999999999999999988877653
No 198
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.94 E-value=1.6e-07 Score=91.99 Aligned_cols=109 Identities=13% Similarity=0.137 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHHHHHhhhhhHhh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKN-NGIWKIVRMICGVMGIFGVAGTYNLLFI 452 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (532)
.........+...++.+..|++.||+|.|+++.++.++..+..+...+..+ ........++..++.|++ +..++....
T Consensus 72 ~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~ 150 (462)
T PRK15034 72 LFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMG 150 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHH
Confidence 333444455566677888899999999999999999988888887776411 111111566666777776 678888999
Q ss_pred hccccccchhhhhHHHHHHHHHHHHHHHHHH
Q 009563 453 YTTELFPTVVRNAALGCATQAAQLGAILAPF 483 (532)
Q Consensus 453 ~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~ 483 (532)
.+++.+|+++||++.|+....+++|..+++.
T Consensus 151 ~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 151 NISFFFPKAKQGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred HHHHHCCHhHhHHHHHHHHHHHhhHHHHHHH
Confidence 9999999999999999997666666554433
No 199
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.94 E-value=9.4e-08 Score=92.87 Aligned_cols=149 Identities=18% Similarity=0.175 Sum_probs=121.8
Q ss_pred eeccc-ccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc-chHHHHH----HHHH
Q 009563 116 VTQWG-LFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS-PNYSTYV----VLRM 189 (532)
Q Consensus 116 ~~~~~-~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~----~~r~ 189 (532)
.+|.| . +....+.+.++..++-++.-.+.+++..| +|.|+++.++.+..++=..+.+.. ++.+... +...
T Consensus 234 l~~~gg~---~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~ 309 (400)
T PF03825_consen 234 LQELGGY---SGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQL 309 (400)
T ss_pred HHHcccc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHh
Confidence 34555 5 66677888888888888999999999999 999999999999999988888877 5544433 3456
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHH-HHHHHHHHHHHHHHHhh---------chHHHHHHHHHHHHHHHH
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFY-FFSTGIALLSGIAYIFQ---------TWRALYIASSIPSILFLL 259 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~~~~l~~~l~---------~wr~~f~~~~~~~~~~~~ 259 (532)
++|+..+........|+.+..|++.|+++.+++.. ..++|..+|..++|++. .|...+.+.++..++..+
T Consensus 310 lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~ 389 (400)
T PF03825_consen 310 LHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILV 389 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999998776 56899999999999986 455667777777777776
Q ss_pred HHhcccccC
Q 009563 260 IILPFLPES 268 (532)
Q Consensus 260 ~~~~~~~es 268 (532)
+.+++++|+
T Consensus 390 ~f~~~fk~~ 398 (400)
T PF03825_consen 390 LFVILFKPK 398 (400)
T ss_pred HHHhhccCC
Confidence 666777664
No 200
>PRK11043 putative transporter; Provisional
Probab=98.93 E-value=1.2e-07 Score=93.54 Aligned_cols=135 Identities=17% Similarity=0.142 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
........++..++.++.|+++||+|||+.+..+..+..++.+...+..+.. ..++..++.+++.+...+....++
T Consensus 44 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~l~G~~~~~~~~~~~~~~ 119 (401)
T PRK11043 44 SASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAA----QLLVLRFVQAVGVCSAAVIWQALV 119 (401)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHH----HHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3344455667778999999999999999999988888887777766544322 344555666777666667777888
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHhhccCC
Q 009563 455 TELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAFYLPET 513 (532)
Q Consensus 455 ~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (532)
.|.+|++.++...+..+....++..++|.+. ..++...|++.+++.++..+..+++++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 120 IDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999888888888888888888888776 3456677777777776666655555543
No 201
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.92 E-value=2.7e-07 Score=92.94 Aligned_cols=116 Identities=11% Similarity=0.009 Sum_probs=93.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh-----cchHHHHHHHHHHHHhhccccc
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF-----SPNYSTYVVLRMLTGFSTGGVG 199 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~ 199 (532)
+....+++.++..++..++.+++++++|| +|+|+.+.++.++..++.+...+ .++.+.+++.-++.|++.+...
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~ 342 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFW 342 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHH
Confidence 45567777787788999999999999999 99999999888877766655432 3456777778889999999999
Q ss_pred hhhhheeecccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 200 LCAFVLATEPVG-------PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 200 ~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
+...++++|..+ ++..|..++......-+|..+++.+.+.+.
T Consensus 343 ~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 343 VLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999865 344566889999999999999988877764
No 202
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.92 E-value=3.3e-08 Score=96.74 Aligned_cols=135 Identities=16% Similarity=0.246 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
........++..++.++.|++.||+|||+.+..+..+..++.+.+....+.. ...+..++.+++.+...+...+++
T Consensus 29 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~l~g~~~~~~~~~~~~~~ 104 (377)
T PRK11102 29 QMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTID----QLIYMRFLHGLAAAAASVVINALM 104 (377)
T ss_pred HHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555677788999999999999999999999988888888877654322 455666777888888888888999
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH-hhccCC
Q 009563 455 TELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA-FYLPET 513 (532)
Q Consensus 455 ~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 513 (532)
.|.+|+++|+++.++.+....+|..++|.+. ..++...|++.+++.++..++. +.+||+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (377)
T PRK11102 105 RDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPET 169 (377)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 9999999999999999999899999888776 3456677777777666655444 455654
No 203
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.92 E-value=1e-07 Score=93.85 Aligned_cols=111 Identities=14% Similarity=0.004 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIY 453 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (532)
.........++..++.+..+++.||+|||+.+..+..+.+++.+++.........+ ..++..++.+++.+...+....+
T Consensus 40 ~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~-~~l~~~~l~G~g~g~~~~~~~~~ 118 (410)
T TIGR00885 40 AALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYT-LFLVGLFILTAGLGFLETAANPY 118 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHH-HHHHHHHHHHhhHHHHHhhhhHH
Confidence 34445566677889999999999999999999999999988887765443222222 55667788899999998988899
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 454 TTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 454 ~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+.+..|++.|++..++.+....+|..++|.+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~ 150 (410)
T TIGR00885 119 ILVMGPESTATRRLNLAQSFNPFGSIIGMVVA 150 (410)
T ss_pred HHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988876
No 204
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.92 E-value=3.4e-08 Score=98.36 Aligned_cols=148 Identities=14% Similarity=0.090 Sum_probs=95.5
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHh--h--cchHHHHHHHHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTA--F--SPNYSTYVVLRML 190 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~l~~~r~l 190 (532)
+.+++|. +..+.++..++..++..+++++.|+++|| +|||+.+.++.++.++..+... . .++....+..-.+
T Consensus 270 l~~~~g~---s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (432)
T PRK10406 270 LVNTAGM---HANVASGIMTAALFVFMLIQPLIGALSDK-IGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMC 345 (432)
T ss_pred HHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 4466788 88889998988888889999999999999 9999988777665444332221 1 2233322222222
Q ss_pred HHhhccccchhhhheeecccCCCchhHHHHHHHHHHHH-HHHHHHHHHHHhh--c-hHHHHHHHHHHHHHHHHHHhcccc
Q 009563 191 TGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFST-GIALLSGIAYIFQ--T-WRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 191 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~~~~l~~~l~--~-wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
.+++.+...+....++.|++|++.|+.+.++......+ .....|.+.+.+. | |...+++.++..++.. +..++++
T Consensus 346 ~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~-~~~~~l~ 424 (432)
T PRK10406 346 ALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAF-LVSLMLH 424 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH-HHHHHhh
Confidence 22333334445667889999999999999998765443 2334666666554 4 6566666666665555 3333444
Q ss_pred c
Q 009563 267 E 267 (532)
Q Consensus 267 e 267 (532)
+
T Consensus 425 ~ 425 (432)
T PRK10406 425 R 425 (432)
T ss_pred h
Confidence 3
No 205
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.90 E-value=1.1e-07 Score=93.67 Aligned_cols=136 Identities=14% Similarity=0.106 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
........++..++.++.|+++||+|||+.+..+..+..++.+......+.. ..++..++.+++.+...+....+.
T Consensus 46 ~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~g~~~~~~~~~~~~~~ 121 (394)
T PRK11652 46 QAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLT----VLIAASAIQGLGTGVGGVMARTLP 121 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH----HHHHHHHHHHhhhhHHHHHHHHHH
Confidence 3444555677788999999999999999999998888888777766543322 455566677777776677777888
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHH-HhhccCCC
Q 009563 455 TELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLF-AFYLPETL 514 (532)
Q Consensus 455 ~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 514 (532)
.|.++++.++.+.++.+....++..++|.+. ..++...|.+.++..++..+. .+++||++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 122 RDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 8999988999999998888888888888776 345667777776655544433 35567654
No 206
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.90 E-value=2.4e-08 Score=97.71 Aligned_cols=129 Identities=21% Similarity=0.187 Sum_probs=95.2
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-hHH-HHHHH-HHHHHHHHHHhh--cchHHHHHHHHH
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGR-KGS-LTVVC-MMNAVFGCLTAF--SPNYSTYVVLRM 189 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Gr-r~~-l~~~~-~~~~~~~~~~~~--~~~~~~l~~~r~ 189 (532)
+.+++|. +..+.+++.+.+.++..++.++.|++.|| .++ |+. +.... ....++...... ..+...+++..+
T Consensus 243 ~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (379)
T TIGR00881 243 LTQEKGF---SKEKASWAFTLYELGGLVGTLLAGWLSDK-LFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLF 318 (379)
T ss_pred HHHHhCC---CHHHHHHHHHHHHHHcchhHHHHHHHHHH-HcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHH
Confidence 4456788 88999999999999999999999999997 543 332 22222 222222222222 345566667778
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHH
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALY 247 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f 247 (532)
+.|+......+....++.|..|+++|+++.++.+....+|..+++.+.+.+. ||++.|
T Consensus 319 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 319 ALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 8887666666666778899999999999999999999999999999988876 777643
No 207
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.89 E-value=3.2e-08 Score=111.02 Aligned_cols=139 Identities=13% Similarity=0.079 Sum_probs=114.6
Q ss_pred eeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc----------------
Q 009563 115 TVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS---------------- 178 (532)
Q Consensus 115 i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~---------------- 178 (532)
+.+.+|. +..+.|++.+.+.+|.+++.++.|++.|+ .++++.+..+.++.+++.+..++.
T Consensus 252 ~~~~~g~---~~~~~g~~~~~~~~g~~ig~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (1140)
T PRK06814 252 AKETLGG---DENVATLFLAVFSVGVAVGSFLASKLSEG-RITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILV 327 (1140)
T ss_pred HHHHcCC---chHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhh
Confidence 4456788 89999999999999999999999999998 787777776666666655544443
Q ss_pred ----chHHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHH
Q 009563 179 ----PNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIAS 250 (532)
Q Consensus 179 ----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~ 250 (532)
++.+.+++..++.|++.+...+...+++.+.+|+++||+++++.++...+|..+++++.+.+. ++...+++.
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~ 407 (1140)
T PRK06814 328 FLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFI 407 (1140)
T ss_pred hhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 677888889999999999999999999999999999999999999999999999999888775 556666655
Q ss_pred HHHHHHH
Q 009563 251 SIPSILF 257 (532)
Q Consensus 251 ~~~~~~~ 257 (532)
++..++.
T Consensus 408 ~~~~~~~ 414 (1140)
T PRK06814 408 ALANLIV 414 (1140)
T ss_pred HHHHHHH
Confidence 5544443
No 208
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.89 E-value=5.8e-07 Score=85.36 Aligned_cols=134 Identities=14% Similarity=0.031 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeec
Q 009563 129 VGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATE 208 (532)
Q Consensus 129 ~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 208 (532)
.+.+.-+-.+...+.-+.+.++.+| +..+.=+....++..++.++.+++++.+.=+++-.+.+++.|........+..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~-v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHR-VPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhh-ccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 3344444455556666667777787 66555556667788889999999999999999999999999988887777643
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhcccccC
Q 009563 209 PVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFLPES 268 (532)
Q Consensus 209 ~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~~es 268 (532)
.+++ ...+-++.+.+.+.++|+..-..+. +-|..+++...+.++..+..++.+|.+
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4443 3456777777777777776544443 447777777777766664445555543
No 209
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.88 E-value=7.6e-09 Score=103.06 Aligned_cols=149 Identities=19% Similarity=0.258 Sum_probs=134.8
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCC--chHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLG--RKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRML 190 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 190 (532)
|...++.+. ++.+.+.+.++..+...++.+..|+++|+ .. ++.+..+++++.+++.+.+.++++++.++..-.+
T Consensus 322 ~~~~~~~g~---~~~~aa~l~Siigi~~i~gRi~~G~laD~-~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~ 397 (509)
T KOG2504|consen 322 PSYAKSLGL---SSNDAAFLLSIIGVSDIIGRIILGLLADK-PGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSIL 397 (509)
T ss_pred HHHHhhcCC---ChhhhHHHHHHHHHhhhhhhhhhhhhcCc-cccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 677779999 99999999999999999999999999998 66 5567788888888999999999999999999999
Q ss_pred HHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 191 TGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 191 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
.|+..|........++.|+...++-..+.|+.....+++.++||++++.+. +|...|+..++..++.. +.++..|
T Consensus 398 fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~-~~~~~~~ 476 (509)
T KOG2504|consen 398 FGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSA-VLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHH-HHHHHhH
Confidence 999999999888889999999999999999999999999999999999776 69999999998888877 5555555
No 210
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.87 E-value=1.3e-07 Score=91.40 Aligned_cols=136 Identities=18% Similarity=0.075 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIY 453 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (532)
.........++..++.+..|++.||+|||+++.........+.. ...... +.. ..++.-++.+++.+. .......
T Consensus 28 ~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~~~~-~~~--~l~~~R~l~G~g~~~-~~~~~~~ 102 (368)
T TIGR00903 28 LGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLLDPF-NYE--WLLACQLLAALGQPF-LLNAFAP 102 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHHhc-cHH--HHHHHHHHHHhHhHH-HHHHHHH
Confidence 34444555667788899999999999998876655444433322 222211 111 566667777777765 4455566
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH-hhccCCC
Q 009563 454 TTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA-FYLPETL 514 (532)
Q Consensus 454 ~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~ 514 (532)
..|.+|+++|+++.++.+....+|..++|.+. ..++...|++.+++.++..++. +++||..
T Consensus 103 ~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 103 AASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 68999999999999999999999988887776 4578888888777766655544 5667653
No 211
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.85 E-value=1.5e-06 Score=89.22 Aligned_cols=143 Identities=15% Similarity=0.226 Sum_probs=117.0
Q ss_pred eecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcch--------HHHHHHH
Q 009563 116 VTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPN--------YSTYVVL 187 (532)
Q Consensus 116 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~l~~~ 187 (532)
.+.+|+ +......+...+....-+..+++|+++|+++||++.+.++.++..++.++.+++.. ....+++
T Consensus 15 ~~~lg~---~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~g 91 (654)
T TIGR00926 15 LNFLGF---SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLG 91 (654)
T ss_pred HHHcCC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHH
Confidence 456777 78888888888888888999999999999899999999999999999988876421 2346677
Q ss_pred HHHHHhhccccchhhhheeecccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhh----------chHHHHHHHHHHH
Q 009563 188 RMLTGFSTGGVGLCAFVLATEPVGPSK---RGAAGMSTFYFFSTGIALLSGIAYIFQ----------TWRALYIASSIPS 254 (532)
Q Consensus 188 r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~~~~l~~~l~----------~wr~~f~~~~~~~ 254 (532)
-.+..+|.|+.-+...+...|.+++++ |...+.++..+.++|..+++.+..++. +|...|.+.++..
T Consensus 92 LaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m 171 (654)
T TIGR00926 92 LALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILM 171 (654)
T ss_pred HHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHH
Confidence 888899999999999999999887543 667788889999999999888877764 4888998888877
Q ss_pred HHHHHHH
Q 009563 255 ILFLLII 261 (532)
Q Consensus 255 ~~~~~~~ 261 (532)
++..++.
T Consensus 172 ~ia~lvf 178 (654)
T TIGR00926 172 ILALIVF 178 (654)
T ss_pred HHHHHHH
Confidence 7766443
No 212
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.85 E-value=4.1e-08 Score=98.53 Aligned_cols=125 Identities=13% Similarity=0.027 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHhh-hCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccch-
Q 009563 384 AEMPAFTITAVLLDK-LGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTV- 461 (532)
Q Consensus 384 ~~~~~~~~~~~l~d~-~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~- 461 (532)
...+..+++|+++|| +|||+++..+.++..++.+.+.+..+... ..++...+.+++.+...|...+++.|.+|++
T Consensus 62 ~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~---ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~ 138 (489)
T PRK10207 62 LVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPD---LIFIALGTIAVGNGLFKANPASLLSKCYPPKD 138 (489)
T ss_pred HHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchh---HHHHHHHHHHhccccccCCHHHHHHHhcCCCc
Confidence 344556789999999 99999999999999999888876543222 3445566677888888888899999999877
Q ss_pred -hhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHhhcc
Q 009563 462 -VRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAFYLP 511 (532)
Q Consensus 462 -~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ 511 (532)
.|+.+.++.+...++|.+++|.+. ..|+.+.|++.++..+++.+...+.+
T Consensus 139 ~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 139 PRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcc
Confidence 457788888888888888887766 45677777775554444443333333
No 213
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.85 E-value=2.7e-08 Score=100.21 Aligned_cols=133 Identities=18% Similarity=0.133 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcc
Q 009563 376 LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTT 455 (532)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (532)
.......++..++.++.|++.||+|||+.+..+.++..++.++..+....... ..++.-++.|++.+..++....++.
T Consensus 80 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~--~l~~~r~~~G~~~~~~~~~~~~~~~ 157 (465)
T TIGR00894 80 LILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIA--LVVFCRVIQGLAQGSVSPATHKIIV 157 (465)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCch--HHHHHHHHHHHhcccchhhHHHHHH
Confidence 33444556778899999999999999999999888877777665443222211 4566677888899999999999999
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHH-----H-hhhhhHHHHHHHHHHHHHHHHhhc
Q 009563 456 ELFPTVVRNAALGCATQAAQLGAILAPFVV-----V-LGGWLPFAVFAACGIIGGLFAFYL 510 (532)
Q Consensus 456 ~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~l 510 (532)
|.+|+++|+++.|+.+....+|..++|.+. . .++...|++.++..++..++.+.+
T Consensus 158 ~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 158 KWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999888877 2 267778888887776665555443
No 214
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.84 E-value=2.3e-08 Score=96.95 Aligned_cols=111 Identities=13% Similarity=0.113 Sum_probs=93.3
Q ss_pred CceeecccccchhhhHHHHHHHHHH-HHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc-----------ch
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFF-FGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS-----------PN 180 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~-l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~-----------~~ 180 (532)
|...+++|. +..+.+.+.++.. ++..++.+++|++.|| +|||+.+..+.++.+++..+..+. ++
T Consensus 233 ~~~l~~~g~---~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (356)
T TIGR00901 233 TLFLLDMGF---SKEEIALVAKINGLLGAILGGLIGGIIMQP-LNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPH 308 (356)
T ss_pred HHHHHHcCC---CHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccch
Confidence 334445888 8999998887765 6788999999999999 999999999988888776655543 45
Q ss_pred HHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHH
Q 009563 181 YSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFS 227 (532)
Q Consensus 181 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 227 (532)
.+.+....++.+++.+...+...+++.|.+|+++||+.+++.+...+
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 67788889999999999999999999999999999999999877654
No 215
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.83 E-value=1.9e-07 Score=92.04 Aligned_cols=137 Identities=18% Similarity=0.189 Sum_probs=99.2
Q ss_pred ceeecccccchhhhHHHHHHHHH-HHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHH---hhc-chHHHHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALF-FFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLT---AFS-PNYSTYVVLR 188 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~-~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r 188 (532)
.+.+++|+ +..+++++.+.. .++..++.++.|++.|| +|||+.+..+.++..+..+.. ++. ++.+.+++.-
T Consensus 235 ~l~~~~G~---~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 310 (402)
T PRK11902 235 FLIRGAGF---SAGEVGIVNKTLGLAATIVGALAGGTLMVR-LGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAI 310 (402)
T ss_pred HHHHhcCC---CHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 34567888 899999988665 45689999999999999 999998887777666554433 343 4556555544
Q ss_pred ----HHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHH
Q 009563 189 ----MLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFL 258 (532)
Q Consensus 189 ----~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~ 258 (532)
+..|++.+...+....++.+.+|.++++ +.+...++|..+++.+++.+. ||+..|.+.++++++..
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~ 383 (402)
T PRK11902 311 GIENLCGGMGTAAFVALLMALCNRSFSATQYA----LLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGL 383 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 4566667777788888888888766554 444445666665556676665 99999999888887765
No 216
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.82 E-value=1e-07 Score=86.10 Aligned_cols=347 Identities=15% Similarity=0.081 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecccCC
Q 009563 133 QALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGP 212 (532)
Q Consensus 133 ~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 212 (532)
.-+..-.+.+.-++.=.+.|- .-.|++++.-.+......++.-+.++.+.+=+.-++.|...+ ...+-++|+-+..++
T Consensus 48 yPvwTYSYLv~LvpvFlLTD~-lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~ 125 (433)
T KOG3810|consen 48 YPVWTYSYLVGLVPVFLLTDY-LRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDP 125 (433)
T ss_pred ccchhHHHHHHHHHHHHHhhh-hhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCH
Confidence 334445566666777788997 788999988888888888888899999999999999998654 466788999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHHHhcccccCchhHhhcCCHHHHHHHHHH
Q 009563 213 SKRGAAGMSTFYFFSTGIALLSGIAYIFQ-----TWRALYIASSIPSILFLLIILPFLPESPRWYLVRGKLNEAMKIMRA 287 (532)
Q Consensus 213 ~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-----~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~ 287 (532)
+++.++.+....+.-.|...|..++-.+. +++..-.+.-....+ ..+..+++|..+|.+.-+.+.++.. .
T Consensus 126 ~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~i-a~~~A~fLP~v~rSl~f~~~~~~~~--v-- 200 (433)
T KOG3810|consen 126 EMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTI-AVLLALFLPRVKRSLYFHRLEDKIS--V-- 200 (433)
T ss_pred HHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHH-HHHHHhhCCCCchhhhhhcccccce--e--
Confidence 99999999999998888888888887776 333333333333233 3366677887765443333322110 0
Q ss_pred HHHHhCCCCCccccccchhhhhhhhhcCccchhh-hhhhhhccccchhhhhcChHHHH-HHHHHHHHHHHHHHHHHHhhh
Q 009563 288 IAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKE-ELATKEAVTGSVIDVIKSPLTRI-RLFLAVTINFLCSVVYYGISL 365 (532)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 365 (532)
.+.++. +.+..+.+ .+.........+.+..+||.... .++..+.........+|...+
T Consensus 201 -----------------~~~e~~---~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~L 260 (433)
T KOG3810|consen 201 -----------------GDLEEM---NPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQIL 260 (433)
T ss_pred -----------------ccchhc---CccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHH
Confidence 000000 00000000 00111122234556667765443 333333333344555565555
Q ss_pred ccccCcchHHH-H---HHHHHHHHHHHHHHHHHHHhhhCCch--hHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 009563 366 NVVNLQTNLYL-N---VLVNAVAEMPAFTITAVLLDKLGRKP--MTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMG 439 (532)
Q Consensus 366 ~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~l~d~~gr~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (532)
+-......... + =....+.+.++.+..|++--+..|.. ++.++.+..+...+.+... .+.| +..+..+++
T Consensus 261 W~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t--~~Iw--~~Ya~yvlf 336 (433)
T KOG3810|consen 261 WKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQT--QHIW--VCYAGYVLF 336 (433)
T ss_pred HHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcc--ccee--hhhhhHHHH
Confidence 54332211111 1 12223445567777777755554442 3333433333333333333 2222 567777777
Q ss_pred HHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH----Hh---------hhhhHHHHHHHHHHHHHHH
Q 009563 440 IFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV----VL---------GGWLPFAVFAACGIIGGLF 506 (532)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~~---------~~~~~~~~~~~~~~~~~~~ 506 (532)
........++...-+++....+.-|..+|+..++.-+-..+-..++ .. -+..-|++.+++.+++...
T Consensus 337 r~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~ 416 (433)
T KOG3810|consen 337 RVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGI 416 (433)
T ss_pred HhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHH
Confidence 7777777777777777777788889999998887766555544444 11 1445678888888877665
Q ss_pred Hhhc
Q 009563 507 AFYL 510 (532)
Q Consensus 507 ~~~l 510 (532)
....
T Consensus 417 ~~~~ 420 (433)
T KOG3810|consen 417 EYLM 420 (433)
T ss_pred HHHH
Confidence 4443
No 217
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.82 E-value=0.00011 Score=72.44 Aligned_cols=116 Identities=9% Similarity=-0.012 Sum_probs=88.8
Q ss_pred hhhHHHHHHHHHHHHHHHH-HHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc----c--------------------
Q 009563 125 EKYKVGLVQALFFFGCMIG-AGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS----P-------------------- 179 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~-~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~----~-------------------- 179 (532)
+...+.++-+...+..++. .++.+++++| ++|++++-+....+.+...++++. +
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~-~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~ 119 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNI-LSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGF 119 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhh
Confidence 3467889888888877776 8999999999 999999988887777777776654 1
Q ss_pred -------hHHHHHHHHHHHHhhccccch-hhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 180 -------NYSTYVVLRMLTGFSTGGVGL-CAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 180 -------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
+.|...+..+...+-...... .-..+++|.++.+|-.|..++...+.++|.++++.+..++.
T Consensus 120 ~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 120 MGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444444444444444 66788999999999999999999999999999998877754
No 218
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.81 E-value=2.9e-07 Score=89.67 Aligned_cols=106 Identities=24% Similarity=0.290 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHHHHHHHHHhhhhhHhhh
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVK-NNGIWKIVRMICGVMGIFGVAGTYNLLFIY 453 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (532)
........++..++.++.|++.||+|||+.+..+.++..++.+...+.. +.. ..++..++.+++. ..++....+
T Consensus 40 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~g~~~-~~~~~~~~~ 114 (366)
T TIGR00886 40 GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYS----VLLLLRLFIGIAG-GSFASCMPW 114 (366)
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHH----HHHHHHHHHHHhc-hhhHhHHHH
Confidence 3444555677788999999999999999999999999988888877665 221 3445556666664 345567788
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 454 TTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 454 ~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+.|.+|+++|+.+.++......+|..+++.+.
T Consensus 115 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 146 (366)
T TIGR00886 115 ISFFFPKKIQGTALGLAAGWGNMGGGVAQFVM 146 (366)
T ss_pred HHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999877777766665554
No 219
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.81 E-value=2.3e-08 Score=92.14 Aligned_cols=137 Identities=19% Similarity=0.232 Sum_probs=119.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHh
Q 009563 372 TNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLF 451 (532)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (532)
...+.....-++.+++.+.+.|.+.||+|+|..++++..++....+++.+..+.. ..++.=.+.+++.+.......
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~----~l~vAR~LQgvgsA~~~tsgl 181 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYP----MLFVARSLQGVGSAFADTSGL 181 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhH----HHHHHHHHhhhhHHHHHhhhH
Confidence 3455556667788999999999999999999999999999999999999876655 567778889999999999999
Q ss_pred hhccccccchh-hhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHhhccC
Q 009563 452 IYTTELFPTVV-RNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAFYLPE 512 (532)
Q Consensus 452 ~~~~~~~p~~~-r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~ 512 (532)
+++++.+|.+. |++++|+.-.+..+|-.++|.+. ..|...+|+++++++++...+.+++-|
T Consensus 182 amlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 182 AMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred HHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 99999999766 69999999999999999999887 567899999999999998888776643
No 220
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.81 E-value=1e-07 Score=89.76 Aligned_cols=129 Identities=12% Similarity=0.105 Sum_probs=103.1
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccc
Q 009563 118 QWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGG 197 (532)
Q Consensus 118 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 197 (532)
.+|+ +..+.++..+.+..+..+|.+..+++.|| +|+|+.+.++.++..++.++....++... ...-++.|++.+.
T Consensus 172 ~~g~---s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~ 246 (310)
T TIGR01272 172 ALGL---PEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSI 246 (310)
T ss_pred cCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHH
Confidence 4688 89999999999999999999999999999 99999999998888888776666555433 3456689999999
Q ss_pred cchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHH
Q 009563 198 VGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ---TWRALYIASSIP 253 (532)
Q Consensus 198 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~ 253 (532)
.+|...+...+..|++ .+++.++. ....+|.++.|.+.|.+. |.+..|++..+.
T Consensus 247 i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 247 MFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 9999998888887653 45666665 456688899998877775 777777754433
No 221
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.81 E-value=5.3e-09 Score=98.40 Aligned_cols=138 Identities=22% Similarity=0.170 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIY 453 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (532)
.+.......+...+++++.|++.||++|++++.++..+-.++.+.-.+....+ .+.++=.+.|+|.+...|+..++
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fw----q~~l~R~~vGiGeAs~~~ia~s~ 145 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFW----QVLLCRGFVGIGEASYSPIAPSL 145 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHH----HHHHHHHHhccchhhhcccchhH
Confidence 34445556677889999999999999999999999999988888888773322 67777888999999999999999
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----Hhh-hhhHHHHHHHHHHHHHHHHh-hccCCCC
Q 009563 454 TTELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLG-GWLPFAVFAACGIIGGLFAF-YLPETLN 515 (532)
Q Consensus 454 ~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~-~~~~~~~~~~~~~~~~~~~~-~l~~~~~ 515 (532)
++|.+|...|++++++.+....+|..+|-... ..+ +.+.|.+.+++.++..++.+ +++|..+
T Consensus 146 IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 146 IADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred hhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 99999999999999999999888766654433 222 78889999999888877764 4454433
No 222
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.79 E-value=2.4e-07 Score=93.60 Aligned_cols=116 Identities=13% Similarity=0.004 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhh-hCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchh--h
Q 009563 387 PAFTITAVLLDK-LGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVV--R 463 (532)
Q Consensus 387 ~~~~~~~~l~d~-~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--r 463 (532)
...+++|++.|| +|||+.+..+.++..++..++.+..+... ..++...+.+++.+...+...++..|.+|++. |
T Consensus 72 ~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~---~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~ 148 (500)
T PRK09584 72 GLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAG---IVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRL 148 (500)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHH---HHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhh
Confidence 344689999999 59999999999988888777765432221 34455566777777777888889999997643 4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHH
Q 009563 464 NAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGL 505 (532)
Q Consensus 464 ~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~ 505 (532)
..+.++.+...++|..++|.+. ..|+...|.+.++..+++.+
T Consensus 149 ~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i 195 (500)
T PRK09584 149 DGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVV 195 (500)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 5678888888899999998887 35677777776655455443
No 223
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.77 E-value=6.7e-08 Score=88.06 Aligned_cols=124 Identities=18% Similarity=0.137 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchH----HHHHHHHHHHHhhccccchhhhheeecccCC
Q 009563 137 FFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNY----STYVVLRMLTGFSTGGVGLCAFVLATEPVGP 212 (532)
Q Consensus 137 ~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~----~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 212 (532)
.+.-.-|.++.+++.|| +|||+.+..+.+++++..++.-.+.+- .+++.+|++. .+.+.+++.|-.|.+|.
T Consensus 391 slaefPGlLIt~~iver-lGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVER-LGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYPT 465 (528)
T ss_pred HHhhCCchhHHHHHHHH-hcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCcccch
Confidence 34556788999999999 999999999999999999887766432 2344556554 44566788999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHhcccc
Q 009563 213 SKRGAAGMSTFYFFSTGIALLSGIAYIFQ-TWRALYIASSIPSILFLLIILPFLP 266 (532)
Q Consensus 213 ~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
+-|+...|.-+...-+|.++.|.++-... .-..+..+.+...++.. ++..++|
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilag-IavcffP 519 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAG-IAVCFFP 519 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHH-HHheeee
Confidence 99999999999999999999999983332 33445556666666666 4445555
No 224
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.76 E-value=6.7e-08 Score=93.65 Aligned_cols=124 Identities=16% Similarity=0.153 Sum_probs=99.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC-CchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRL-GRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLT 191 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 191 (532)
|.+.++.|. +..+.+++.+.+.++..++.++.|++.|| + +||+.+.++.++.+++.++..+.++..... .-++.
T Consensus 221 p~~~~~~g~---~~~~~g~~~~~~~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 295 (355)
T TIGR00896 221 PAILISHGA---SAATAGSLLALMQLAQAASALLIPALARR-VKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVL 295 (355)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHH
Confidence 445566788 88999999999999999999999999999 8 567777888888888877777665433332 45788
Q ss_pred HhhccccchhhhheeecccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 192 GFSTGGVGLCAFVLATEPVG-PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 192 G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
|++.+...+.....+.+..+ +++++...++.+....+|..++|.+.+.+.
T Consensus 296 g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 296 GLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred HHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988887777665554 566788889888888889899999888875
No 225
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.74 E-value=4.9e-07 Score=84.64 Aligned_cols=133 Identities=19% Similarity=0.205 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhh
Q 009563 373 NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFI 452 (532)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (532)
+.+.......+.+.+.++.-|++.||+|.|+....+.++..+-++.+.+....+..+ .++++..+.|++ +..+.+...
T Consensus 50 q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~-~ll~~gll~G~~-GasFav~m~ 127 (417)
T COG2223 50 QKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTW-QLLVIGLLLGLA-GASFAVGMP 127 (417)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchH-HHHHHHHHHhcc-cceehcccc
Confidence 344444555566677888999999999999999999999999998888887766543 445555555543 577889999
Q ss_pred hccccccchhhhhHHHHHHHHHHHHHH----HHHHHH-Hhh---hhhHHHHHHHHHHHHHHHHh
Q 009563 453 YTTELFPTVVRNAALGCATQAAQLGAI----LAPFVV-VLG---GWLPFAVFAACGIIGGLFAF 508 (532)
Q Consensus 453 ~~~~~~p~~~r~~~~g~~~~~~~~g~~----i~p~~~-~~~---~~~~~~~~~~~~~~~~~~~~ 508 (532)
.+++.+|+|++|.+.|+.. .+++|.. ++|.+. ..+ +.....+.....++..+..+
T Consensus 128 ~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~ 190 (417)
T COG2223 128 NASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAW 190 (417)
T ss_pred cccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 8888754 456666 444 55566666666666555443
No 226
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.74 E-value=4.9e-06 Score=80.54 Aligned_cols=116 Identities=21% Similarity=0.212 Sum_probs=98.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc--hHHHHHHHHHHHHhhccccchhh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP--NYSTYVVLRMLTGFSTGGVGLCA 202 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~ 202 (532)
++.+..+.......+..++.+++.++.+| +|+|+++.++.++..++.++.-+.+ +.+.+++..++.++|.+...+..
T Consensus 270 ~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~ 348 (467)
T COG2211 270 PELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLP 348 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccccc
Confidence 56667777888888888889999999999 9999999999999999999988875 78889999999999999999999
Q ss_pred hheeecccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 203 FVLATEPVG-------PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 203 ~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
.++++|..+ .+.-|...+......-+|.+++..+.++..
T Consensus 349 wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 349 WAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred HHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998765 233477778888888888888887666654
No 227
>PRK10133 L-fucose transporter; Provisional
Probab=98.73 E-value=1e-06 Score=87.61 Aligned_cols=110 Identities=16% Similarity=-0.006 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHHHHHHHHHhhhhhHhh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVK-NNGIWKIVRMICGVMGIFGVAGTYNLLFI 452 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (532)
.........++..++.++.|++.||+|||+++..+..+..++.++..... ..+.. ..++..++.+++.+...+....
T Consensus 63 ~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~--~ll~~r~l~G~g~g~~~~~~~~ 140 (438)
T PRK10133 63 AGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYT--LFLVGLFIIAAGLGCLETAANP 140 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHHHHHHhhHHH
Confidence 34445666678889999999999999999999999999998887754221 22221 5667778889999999888888
Q ss_pred hccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 453 YTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 453 ~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
++.+..|++.|+...++.+....+|..++|.+.
T Consensus 141 ~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 141 FVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888887777766778898888889988888775
No 228
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.73 E-value=1.3e-06 Score=84.37 Aligned_cols=134 Identities=17% Similarity=0.069 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
+........+..+..+.+|++.||+|.|+++..+.+.-.+..+++.+..+.. .+.+.-++.|++.+..+ ....++
T Consensus 65 G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~----~L~i~R~llGvaEA~~~-A~~syI 139 (511)
T TIGR00806 65 NEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVW----HMQLMEVFYSVTMAARI-AYSSYI 139 (511)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH-HHHHHH
Confidence 3444555567778999999999999999999999999999988888865432 57778889999999988 999999
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHH----Hhh---hhhHHHHHHHHHHHHHHHHhhccCC
Q 009563 455 TELFPTVVRNAALGCATQAAQLGAILAPFVV----VLG---GWLPFAVFAACGIIGGLFAFYLPET 513 (532)
Q Consensus 455 ~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (532)
...+|+++|+++.|+.+....+|.++++.+. .++ +....++..+...++.++.+++|..
T Consensus 140 ~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~ 205 (511)
T TIGR00806 140 FSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRP 205 (511)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999998888777 233 2233444555556666667888743
No 229
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.73 E-value=6.4e-08 Score=88.72 Aligned_cols=106 Identities=19% Similarity=0.213 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
+.....+++.+++.+...|.++||+|||.++..+....++..++.+...+. . .++..=++.|+.. +...+..+++
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F-~---afv~aR~l~Gi~k-gnl~v~rAii 145 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF-A---AFVLARFLGGIFK-GNLSVIRAII 145 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH-H---HHHHHHHhhhhcc-CchHHHHHHH
Confidence 344556678889999999999999999999999999999988777766544 1 2233244455443 4557889999
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 455 TELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 455 ~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+|++++++|+.+++.++....+|.++||.+.
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIG 176 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIG 176 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchhh
Confidence 9999999999999999999999999999998
No 230
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.72 E-value=3.5e-07 Score=90.98 Aligned_cols=114 Identities=18% Similarity=0.294 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc--hHHHHHHHHHHHHhhccccchhhhh
Q 009563 127 YKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP--NYSTYVVLRMLTGFSTGGVGLCAFV 204 (532)
Q Consensus 127 ~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~ 204 (532)
...+.+..+..++..++.+++++++|| +|+|+.+..+.++.+++.++..+.+ |.+.+++.-++.|++.+...+...+
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a 338 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKR-FGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWA 338 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH-ccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccccccccc
Confidence 567888889999999999999999999 9999999999999999999988886 9999999999999999999999999
Q ss_pred eeecccCC-------CchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 205 LATEPVGP-------SKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 205 ~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
+++|..+. ++.|...+.......+|..+++.+.+.+.
T Consensus 339 ~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 339 MLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred ccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 99998873 44588889999999999999888777654
No 231
>PTZ00207 hypothetical protein; Provisional
Probab=98.72 E-value=6.6e-07 Score=90.23 Aligned_cols=118 Identities=15% Similarity=0.115 Sum_probs=86.7
Q ss_pred HHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhcc---chhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhh
Q 009563 388 AFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNN---GIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRN 464 (532)
Q Consensus 388 ~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~ 464 (532)
+.+..|++.||+|+|+++.++.++..++.++.++..+. ...+ .+.+..++.+++.+..++.....+.+.+| ++||
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~-~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG 154 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVV-RLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRG 154 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhH
Confidence 45578999999999999999999999999888876321 1111 45556667777777777777788888887 6789
Q ss_pred hHHHHHHHHHHHHHHHHHHHH----HhhhhhHHHHHHHHHHHHHHHH
Q 009563 465 AALGCATQAAQLGAILAPFVV----VLGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 465 ~~~g~~~~~~~~g~~i~p~~~----~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
.+.|+......+|+++.+.+. ..+....|++.+++.++..++.
T Consensus 155 ~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~ 201 (591)
T PTZ00207 155 AVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILA 201 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987644333 2245556666666666655544
No 232
>PRK09669 putative symporter YagG; Provisional
Probab=98.72 E-value=1e-06 Score=88.17 Aligned_cols=113 Identities=13% Similarity=0.124 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh--cchHHHHHHHHHHHHhhccccchhhhhe
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF--SPNYSTYVVLRMLTGFSTGGVGLCAFVL 205 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 205 (532)
..+.+.....++..++.+++++++|| +|+|+.+.++.++..++.+...+ .++.+.+++..++.|++.+...+...++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667778888999999999999 99999999888766654433322 3577778888899999999999999999
Q ss_pred eecccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 206 ATEPVG-------PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 206 i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
++|..+ ++..|...+.......+|..+++.+++.+.
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll 386 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWIL 386 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998875 233466788888889999999998888765
No 233
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.71 E-value=1.2e-07 Score=98.02 Aligned_cols=139 Identities=14% Similarity=0.198 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhc-------------------------------
Q 009563 376 LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKN------------------------------- 424 (532)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 424 (532)
.......++..++.++.+++.||.+||+.+.++.++.+++.+++.+.+.
T Consensus 72 ~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~ 151 (633)
T TIGR00805 72 LINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQ 151 (633)
T ss_pred eeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCC
Confidence 3344555777888899999999999999999999999999888876530
Q ss_pred --------------c--chhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH---
Q 009563 425 --------------N--GIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV--- 485 (532)
Q Consensus 425 --------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~--- 485 (532)
. ...+..+++.-++.|++.+..++...+++.|.+|++.|+...|+.+....+|..+|+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l 231 (633)
T TIGR00805 152 ALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFC 231 (633)
T ss_pred CccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 0 112224567788889999999999999999999999999999999999999988888776
Q ss_pred -H-h---------------------h-hhhHHHHHHHHHHHHHHHHhhccCCC
Q 009563 486 -V-L---------------------G-GWLPFAVFAACGIIGGLFAFYLPETL 514 (532)
Q Consensus 486 -~-~---------------------~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 514 (532)
. . | ++..|++.+++.++.++..+++|++.
T Consensus 232 ~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~l 284 (633)
T TIGR00805 232 LQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKAL 284 (633)
T ss_pred HhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 1 1 1 33456677776666665566666543
No 234
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.70 E-value=4.2e-07 Score=91.10 Aligned_cols=127 Identities=17% Similarity=0.124 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcc
Q 009563 376 LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTT 455 (532)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (532)
+......+...++.++.|+++|.+|||+.++.+.++..++.++....++.+ .++....+.+++.+... +....++
T Consensus 82 w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~----~~iag~~l~GvgaG~~~-~~~~~is 156 (599)
T PF06609_consen 82 WFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMN----TFIAGMVLYGVGAGVQE-LAALAIS 156 (599)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHH----HHHHHHHHHHHhhHHHH-HHHHHHH
Confidence 344455677778889999999999999999999999999999998877765 46778888888765544 4566689
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH
Q 009563 456 ELFPTVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 456 ~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
|..|.+.|..+.++..........++|.+. ..++.+.|++..+...++.+..
T Consensus 157 El~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 157 ELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHH
Confidence 999999998877766654434344555555 2357778887777666665543
No 235
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.69 E-value=2.4e-07 Score=87.23 Aligned_cols=128 Identities=13% Similarity=0.126 Sum_probs=100.9
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccC---CCCchHH-HHHHHHHHHHHHHHHhhcchH-------
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDS---RLGRKGS-LTVVCMMNAVFGCLTAFSPNY------- 181 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr---~~Grr~~-l~~~~~~~~~~~~~~~~~~~~------- 181 (532)
|+..++.|+ .....+.+--...+...+.+++.|..+|| ||||||. +..+.++..++.++.+++.++
T Consensus 56 tPyl~~lGv---phk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~ 132 (498)
T KOG0637|consen 56 TPYLQSLGV---PHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDN 132 (498)
T ss_pred cHHHHHcCC---CcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCC
Confidence 777888999 78888888888888889999999999997 6899765 555666777777777776543
Q ss_pred ----------HHHHHHHHHHHhhccccchhhhheeecccCCCchhH-HHHHHHHHHHHHHHHHHHHHHHhhchH
Q 009563 182 ----------STYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGA-AGMSTFYFFSTGIALLSGIAYIFQTWR 244 (532)
Q Consensus 182 ----------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~~~~l~~~l~~wr 244 (532)
..++++--+.=++.-.....+-+++.|...++++.+ +.+++..+..+|..+|..++++. +|+
T Consensus 133 ~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~-~~~ 205 (498)
T KOG0637|consen 133 ERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL-GLY 205 (498)
T ss_pred cccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc-Cce
Confidence 234455555566666777888999999998777777 99999999999999999998766 443
No 236
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.69 E-value=3.1e-07 Score=86.99 Aligned_cols=140 Identities=27% Similarity=0.391 Sum_probs=114.2
Q ss_pred Cceeecccccchhh--hHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcch--HHHHHHHH
Q 009563 113 SSTVTQWGLFCEEK--YKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPN--YSTYVVLR 188 (532)
Q Consensus 113 ~~i~~~~~~~~~s~--~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r 188 (532)
+.+..+++. +. .+.++..+.+.++..++.++.|.++|| +|||+.+..+.....++.++.++..+ .+.+++.|
T Consensus 26 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (338)
T COG0477 26 PLLLSTLSL---SSGRLLYGLLLSAFFLGYAIGSLLAGPLGDR-YGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILR 101 (338)
T ss_pred HHHHHHcCC---CchhHHHHHHHHHHHHHHHHHhhhhhhcccc-ccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 344445544 34 478999999999999999999999999 89999888888776677777777766 89999999
Q ss_pred HHHHhhccccchhhhheeecccCC-CchhHHHHHHHH-HHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHH
Q 009563 189 MLTGFSTGGVGLCAFVLATEPVGP-SKRGAAGMSTFY-FFSTGIALLSGIAYIFQ-----TWRALYIASSIPSIL 256 (532)
Q Consensus 189 ~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~~~~l~~~l~-----~wr~~f~~~~~~~~~ 256 (532)
+++|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+. +||+.|.+.......
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 102 LLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 999999999999999999999987 678888888888 57788888887766654 799866666555544
No 237
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.69 E-value=1e-06 Score=76.81 Aligned_cols=336 Identities=17% Similarity=0.130 Sum_probs=172.0
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHh
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGF 193 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 193 (532)
.+-+.++. .+.++|.+.-..+-...+...+.|.++|+ .|||+.-+.-++...+++ +.-.++.|-.++++|.+-|+
T Consensus 62 yLYstYgF---gkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGi 136 (454)
T KOG4332|consen 62 YLYSTYGF---GKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGI 136 (454)
T ss_pred eeehhcCc---cCCccceeeecccchHHHHHHHHHHHHhh-hccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhH
Confidence 45566777 67788887777777778888899999999 999997666555555544 34467889999999999999
Q ss_pred hccccchhhhhe-eecccCCCchhHHHHHHHHHH----HHHHHHHHHHHH----Hhh-----chHHHHHHHHHHHHHHHH
Q 009563 194 STGGVGLCAFVL-ATEPVGPSKRGAAGMSTFYFF----STGIALLSGIAY----IFQ-----TWRALYIASSIPSILFLL 259 (532)
Q Consensus 194 ~~~~~~~~~~~~-i~~~~~~~~r~~~~~~~~~~~----~~G~~~~~~l~~----~l~-----~wr~~f~~~~~~~~~~~~ 259 (532)
+.+..+.+--++ +.|-- ++|+.-.-+....+ .+|.-+-.+++| .+. |--.+|-..+.+..+...
T Consensus 137 aTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmA 214 (454)
T KOG4332|consen 137 ATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMA 214 (454)
T ss_pred HHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHH
Confidence 998888776554 44443 23433322222222 223322233333 332 334455544443333332
Q ss_pred HHhcccccCchhHhhcCCHHHHHHHHHHHHHHhCCCCCccccccchhhhhhhhhcCccchhhhhhhhhccccchhhhhcC
Q 009563 260 IILPFLPESPRWYLVRGKLNEAMKIMRAIAKSNGRHLPDGVVLMLDDEQENDASNGKQNYKEELATKEAVTGSVIDVIKS 339 (532)
Q Consensus 260 ~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (532)
+..- .|-..-++..+.++.+.+. +...+.+..+
T Consensus 215 vil~------~W~ENygdps~~kdlltqf-----------------------------------------~gaa~aiaSD 247 (454)
T KOG4332|consen 215 VILS------SWSENYGDPSENKDLLTQF-----------------------------------------KGAARAIASD 247 (454)
T ss_pred HHHh------hhhhccCChhhhHHHHHHh-----------------------------------------hHhHHHHhcc
Confidence 2211 1211222222222222211 1122333444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhccccCcc-----hHHHHHHHHHHHHHHHHHHHHHHHhhhCCc--hhHHHHHHHH
Q 009563 340 PLTRIRLFLAVTINFLCSVVYYGISLNVVNLQT-----NLYLNVLVNAVAEMPAFTITAVLLDKLGRK--PMTIGTLWFS 412 (532)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~--~~~~~~~~~~ 412 (532)
++ ..++...-..+-+..|...-+|.+.... ..+.......+..++|+-+..++..|-..| ..+.+.+++.
T Consensus 248 ~k---i~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs 324 (454)
T KOG4332|consen 248 EK---IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVS 324 (454)
T ss_pred hH---HHHHHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHH
Confidence 32 2222222222222222222333333321 122222333344555665655555543332 3444444444
Q ss_pred HHHHHHHHhh----hccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH---
Q 009563 413 GFFCLLGSLV----KNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV--- 485 (532)
Q Consensus 413 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~--- 485 (532)
.+.+.+..+. ++.... ...++...++-.+.+..+|...-+-.+..|++.|++.+-+...=-++...++-+..
T Consensus 325 ~a~l~Lpilt~~vsP~kes~-~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~ 403 (454)
T KOG4332|consen 325 IAALLLPILTSSVSPSKESP-SESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVD 403 (454)
T ss_pred HHHHHHHHHHhccCCCcCCc-hHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccc
Confidence 4444333332 222111 14456666677788899999999999999999998766554433233222222221
Q ss_pred --HhhhhhHHHHHHHHHHHHHHHH
Q 009563 486 --VLGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 486 --~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
..+....|-+......++.+..
T Consensus 404 ~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 404 AFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred cCccccchhhhhhHHHHHHHHHHH
Confidence 2223345555555555554443
No 238
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.66 E-value=1.7e-07 Score=82.18 Aligned_cols=122 Identities=16% Similarity=0.108 Sum_probs=99.3
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH-HHHHhhcchHHHHHHHHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVF-GCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~r~l~G 192 (532)
-.++.||+ |+...+.+.+..+.-.++.+++.|.++|| +|++...+.+..+..+. -....| +++.=..+..+.|
T Consensus 290 fF~~rfGl---S~~~a~~i~s~vy~Isav~spvfg~i~Dk-~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lG 363 (459)
T KOG4686|consen 290 FFQKRFGL---SAVSAGNILSTVYGISAVLSPVFGAISDK-YGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLG 363 (459)
T ss_pred HHHHhhCC---ChhhccchhhhhhhhhhhhhhhHHHhHhh-hcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHh
Confidence 56789999 99999999998888889999999999999 99998776665544433 333333 4444557778888
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
+............++-..|+++.|++.+..+...++|..+.+++++.+.
T Consensus 364 LsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~ 412 (459)
T KOG4686|consen 364 LSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIA 412 (459)
T ss_pred hhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheee
Confidence 8777766666777888889999999999999999999999999999987
No 239
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.66 E-value=2.8e-07 Score=94.19 Aligned_cols=133 Identities=20% Similarity=0.180 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcc
Q 009563 376 LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTT 455 (532)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (532)
.......++.++|.++.|.++||+|||+++..+.++..++.+..++.++.. ..++.=++.|++.++.......+..
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~----~~~~~Rfl~G~~~~~~~~~~~~~~~ 197 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYW----MFLIFRFLSGFFGSGPLTVGFGLVA 197 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHH----HHHHHHHHHHhhccchhHHhHhhhe
Confidence 344555678889999999999999999999999999999998877776654 6778888999999999999999999
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHH---HhhhhhHHHHHHHHHHHHHHHHhhccCC
Q 009563 456 ELFPTVVRNAALGCATQAAQLGAILAPFVV---VLGGWLPFAVFAACGIIGGLFAFYLPET 513 (532)
Q Consensus 456 ~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (532)
|.++++.|+.+..+ ......++.++|.+. .-++.+.+++..+..++..++.++.+|.
T Consensus 198 E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es 257 (521)
T KOG0255|consen 198 EIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPES 257 (521)
T ss_pred eecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcC
Confidence 99999999999999 666777777776666 2246667777777666666654455454
No 240
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.66 E-value=2.7e-06 Score=84.00 Aligned_cols=162 Identities=14% Similarity=0.011 Sum_probs=100.9
Q ss_pred HHHHHHHHHHhhhccccCcchHH---HHHHHHHHHHHHHHHHHHHHHh----hhCCchhHHHH-HHHHHHHHHHHHhhhc
Q 009563 353 NFLCSVVYYGISLNVVNLQTNLY---LNVLVNAVAEMPAFTITAVLLD----KLGRKPMTIGT-LWFSGFFCLLGSLVKN 424 (532)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~d----~~gr~~~~~~~-~~~~~~~~~~~~~~~~ 424 (532)
.+.+.......+.+....+.+.. .......+..++..++.|+++| |+|||+.++.+ .....++++++.+..+
T Consensus 17 q~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~ 96 (477)
T TIGR01301 17 QFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAAD 96 (477)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCch
Confidence 33444333333444444444333 3334455677788889999999 59999988764 5555555555555432
Q ss_pred cc------------hhH-HHHHHHHHHHHHHHHhhhhhHhhhccccccchhh--hhHHHHHHHHHHHHHHHHHHHHHh--
Q 009563 425 NG------------IWK-IVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVR--NAALGCATQAAQLGAILAPFVVVL-- 487 (532)
Q Consensus 425 ~~------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r--~~~~g~~~~~~~~g~~i~p~~~~~-- 487 (532)
.. .+. +..++...+..+......+...+++.|..|+++| +.+.++.+....+|+.+++.+...
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~ 176 (477)
T TIGR01301 97 IGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSG 176 (477)
T ss_pred hhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 10 110 1233344455567777778889999999998865 578888888888998888876621
Q ss_pred ------------------hhhhHHHHHHHHHHHHHHHH-hhccCCC
Q 009563 488 ------------------GGWLPFAVFAACGIIGGLFA-FYLPETL 514 (532)
Q Consensus 488 ------------------~~~~~~~~~~~~~~~~~~~~-~~l~~~~ 514 (532)
+....|++.+++.+++.+.. +..+|..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 177 LYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 23445666666666665554 4556654
No 241
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.61 E-value=7.2e-06 Score=77.19 Aligned_cols=143 Identities=15% Similarity=0.121 Sum_probs=122.1
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHh---hcchHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTA---FSPNYSTYVVLRM 189 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~ 189 (532)
|.=.+-||+ +..+..-+++.+..|..++-...|++..|+.++|+...+|+.+..++..+.. ...+.+.+..+-+
T Consensus 233 Pygg~Vfgm---sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~ 309 (403)
T PF03209_consen 233 PYGGEVFGM---SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVF 309 (403)
T ss_pred CchhHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 445677999 9999999999999999999999999988558899988899888887766644 4467889999999
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-------------chHHHHHHHHHHHHH
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ-------------TWRALYIASSIPSIL 256 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-------------~wr~~f~~~~~~~~~ 256 (532)
+.|++.|.......+.+.|...+++.|..+|.+...+.++..++..+++.+. +|-.+|.+.++..++
T Consensus 310 l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~ 389 (403)
T PF03209_consen 310 LLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLA 389 (403)
T ss_pred HHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988888764 466667777666555
Q ss_pred HH
Q 009563 257 FL 258 (532)
Q Consensus 257 ~~ 258 (532)
..
T Consensus 390 a~ 391 (403)
T PF03209_consen 390 AL 391 (403)
T ss_pred HH
Confidence 44
No 242
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.61 E-value=1.2e-06 Score=86.42 Aligned_cols=133 Identities=20% Similarity=0.193 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcc
Q 009563 376 LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTT 455 (532)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (532)
........+.+++.+.++++.||+|-|+++..+.++.+++.++..+......+ ..++.=++.|++.+..+|....+..
T Consensus 77 ~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~--~~~~~R~lqGl~~g~~~pa~~~i~~ 154 (466)
T KOG2532|consen 77 LIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFY--LLLVLRFLQGLGQGVLFPAIGSILA 154 (466)
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcch--hhHHHHHHhHHHHhHHHhhhhceee
Confidence 44455667888999999999999999999999999999999999888766554 5677888999999999999999999
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHH-----H-hhhhhHHHHHHHHHHHHHHHHhhc
Q 009563 456 ELFPTVVRNAALGCATQAAQLGAILAPFVV-----V-LGGWLPFAVFAACGIIGGLFAFYL 510 (532)
Q Consensus 456 ~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~l 510 (532)
+-.|+.+|++..++.....++|.+++-.+. . .|+...|++.+++.++..++.+++
T Consensus 155 ~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 155 KWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred eECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888877764443 3 789999999999999887776544
No 243
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.58 E-value=1.1e-06 Score=80.56 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=120.6
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
|.+..|-|+ |..+.|++.+...+.....++....+++|+-.+|+..+...+++.++.+.+.+.+.-..++- -++.|
T Consensus 232 P~ili~~G~---sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG 307 (395)
T COG2807 232 PAILIDRGL---SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLG 307 (395)
T ss_pred HHHHHHcCC---CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHh
Confidence 889999999 99999999999999999999999999996468888888889999999888888765433333 49999
Q ss_pred hhccccchhhhheeecccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhcc
Q 009563 193 FSTGGVGLCAFVLATEPVGP-SKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILPF 264 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
+|.|..++.+...+.+-.+. ++-++..++.+....+=..+||.+.|++. +|+...+......++..+..+..
T Consensus 308 ~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 308 LGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred CccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999887754 44455556666666666677899988887 99999988888777766454443
No 244
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.57 E-value=4.9e-05 Score=74.64 Aligned_cols=55 Identities=13% Similarity=-0.034 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 431 VRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
..++..++.++..|-..+....+..+..++++|..+..+......+|-.+|..+.
T Consensus 374 ~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 374 YFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788889999888899999999999999998888888887777777776654
No 245
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.51 E-value=1.4e-06 Score=88.76 Aligned_cols=135 Identities=18% Similarity=0.214 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
........++..++.++.|+++|++|||+.+.++.++..++.++..+..+.. .+.++-++.|++.++...+...+.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~----~l~~GR~l~G~g~G~~~~~~piy~ 167 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWY----QLIVGRILTGLGVGGASVLAPVYI 167 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHH----HHHHHHHHhccchhhhhhcchhhH
Confidence 4555666788899999999999999999999999999999999999887443 677888999999999999999999
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHH-Hh-----hhhhHHHHHHHHHHHHHHHHhhccCC
Q 009563 455 TELFPTVVRNAALGCATQAAQLGAILAPFVV-VL-----GGWLPFAVFAACGIIGGLFAFYLPET 513 (532)
Q Consensus 455 ~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (532)
+|..|++.||...+.......+|..++-.+. .. ++...+.+..+.+++..+..+++||+
T Consensus 168 sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pes 232 (513)
T KOG0254|consen 168 SEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPES 232 (513)
T ss_pred hhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999988888877774444 11 45556666666666665666677764
No 246
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.51 E-value=4.6e-07 Score=90.73 Aligned_cols=121 Identities=7% Similarity=-0.012 Sum_probs=106.7
Q ss_pred ecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc----------chHHHHHH
Q 009563 117 TQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS----------PNYSTYVV 186 (532)
Q Consensus 117 ~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~ 186 (532)
+.+|. ++.+.|++.+...++..++....+++.+| ++.|+++.++.++.+++.+..... ++.+.++.
T Consensus 281 ~~lG~---s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~ 356 (468)
T TIGR00788 281 QCLPG---GPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLG 356 (468)
T ss_pred ccCCC---CcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeee
Confidence 46788 99999999999999999999999999998 999999999999999888664311 34445666
Q ss_pred HHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 187 LRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 187 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
.-++.+++.+........++.+..|+++++...++.....++|..+++.+++.+.
T Consensus 357 ~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~ 411 (468)
T TIGR00788 357 DSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLM 411 (468)
T ss_pred hhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788999999999999999999999999999999999999999999999988876
No 247
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.49 E-value=5.2e-05 Score=72.90 Aligned_cols=48 Identities=10% Similarity=0.191 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHH
Q 009563 434 ICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILA 481 (532)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~ 481 (532)
+..++..+.....+....++-+.+..|..-|+.+.+.|++.++|+---
T Consensus 410 ~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP 457 (544)
T PF13000_consen 410 IQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWP 457 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCch
Confidence 334455556666677788888999999999999999999999996543
No 248
>PRK11462 putative transporter; Provisional
Probab=98.46 E-value=2.2e-05 Score=78.65 Aligned_cols=114 Identities=17% Similarity=0.159 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc--hHHHHHHHHHHHHhhccccchhhhh
Q 009563 127 YKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP--NYSTYVVLRMLTGFSTGGVGLCAFV 204 (532)
Q Consensus 127 ~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~ 204 (532)
...+.+.+.+.++..++.+++++++|| +|+|+.+..+..+.++..++..+.+ +...+++.-++.|++.+...+...+
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788889999999999999999 9999987766555444444333322 2334455556778877777766677
Q ss_pred eeecccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 205 LATEPVG-------PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 205 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
++.|..+ ++..|...+.......+|..+++.+++.+.
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777665 333355567777788888888888777654
No 249
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.45 E-value=5.8e-06 Score=81.86 Aligned_cols=137 Identities=16% Similarity=0.139 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhh
Q 009563 373 NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFI 452 (532)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (532)
..........++.+++.+.++.+.||++..+.+....+.-.+..++.....+.+ .+++.-++.|+..+..+|....
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~----~~ialr~llGl~es~~wP~~~~ 157 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFP----GLIALRFLLGLFESGGWPGVVA 157 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhH----HHHHHHHHHHHHhcccchHHHH
Confidence 344555666688889999999999999965555555444444443433333332 5778889999999999999999
Q ss_pred hccccccchhhhhHHHHHHHHHHHHHHHHHHHH-----------HhhhhhHHHHHHHHHHHHHHHH-hhccCC
Q 009563 453 YTTELFPTVVRNAALGCATQAAQLGAILAPFVV-----------VLGGWLPFAVFAACGIIGGLFA-FYLPET 513 (532)
Q Consensus 453 ~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~-----------~~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 513 (532)
++..-+.+++|+.-+|+.+....+|+++|+++. ..|+.+.|++-+++.++..++. +++|+.
T Consensus 158 ~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 158 ILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred HHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence 999999999999999999999999988888887 2348889999998888877665 566643
No 250
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.38 E-value=1.8e-05 Score=73.85 Aligned_cols=110 Identities=18% Similarity=0.034 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
.........+..++.+..+++.+|+|+|+-++.+..+.++++.+++-......+. .+++..++.+.+.+......+.++
T Consensus 51 ~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~-~FL~~lFila~Gi~~LetaaNp~v 129 (422)
T COG0738 51 SLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYG-FFLVALFILASGIGLLETAANPYV 129 (422)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHH-HHHHHHHHHHhhhHHHHhccchHH
Confidence 3334444456678888999999999999999999999999999987554433322 566777888888888889999999
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 455 TELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 455 ~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
..+.|++..+.-+.+...++.+|++++|.+.
T Consensus 130 ~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 130 TLLGKPESAAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred HHhCCchhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 9999998888889999999999999999988
No 251
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.33 E-value=4.3e-06 Score=80.32 Aligned_cols=122 Identities=18% Similarity=0.136 Sum_probs=97.6
Q ss_pred HHHHHHHHHHhh-hCCchhHHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchh--
Q 009563 387 PAFTITAVLLDK-LGRKPMTIGTLWFSGFFCLLGSLVK-NNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVV-- 462 (532)
Q Consensus 387 ~~~~~~~~l~d~-~gr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-- 462 (532)
+..+++|+++|| +|+|+.+..+.+++.++.+++.... .... .+++.+.+..++.++.=+...+++.|.+|+++
T Consensus 76 ~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~---gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr 152 (498)
T COG3104 76 LTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPG---GLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR 152 (498)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccccc---HHHHHHHHHHhccccccccHHHHHHHhcCCCCcc
Confidence 467799999999 5999999999999999999998874 2222 56677777778999999999999999997533
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHhhcc
Q 009563 463 RNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAFYLP 511 (532)
Q Consensus 463 r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ 511 (532)
|-.++++..+..++|++++|.+. ..++...|...++-..++.+.....+
T Consensus 153 rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 153 RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 66778888888889999999888 45677777777777777766665554
No 252
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.32 E-value=0.00012 Score=74.03 Aligned_cols=143 Identities=13% Similarity=0.086 Sum_probs=111.5
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcch------------
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPN------------ 180 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~------------ 180 (532)
..+.++++. +...+.-..+.+.-......+..++++|-++||-+++.++.++..++.++..++..
T Consensus 62 ~ylt~~~~~---~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~ 138 (571)
T KOG1237|consen 62 TYLTLELHA---SGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFK 138 (571)
T ss_pred HHHHHHhcc---chHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCC
Confidence 345567777 66777778888888888889999999998789999999999998888655443211
Q ss_pred -------------HHHHHHHHHHHHhhccccchhhhheeecccC---CCc---hhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 181 -------------YSTYVVLRMLTGFSTGGVGLCAFVLATEPVG---PSK---RGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 181 -------------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~~---r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
...++.+.-+..+|.|+.-+...++-+|-++ +++ +...+.++....++|..++..+..+..
T Consensus 139 ~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq 218 (571)
T KOG1237|consen 139 PGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQ 218 (571)
T ss_pred CCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhh
Confidence 2356677778888999999999999999887 222 235678889999999999888887774
Q ss_pred ---chHHHHHHHHHHHHHHH
Q 009563 242 ---TWRALYIASSIPSILFL 258 (532)
Q Consensus 242 ---~wr~~f~~~~~~~~~~~ 258 (532)
+|.+.|.+..+..++..
T Consensus 219 ~~~~w~lgf~i~~~~~~lai 238 (571)
T KOG1237|consen 219 DNVGWKLGFGIPTVLNALAI 238 (571)
T ss_pred hcccceeeccHHHHHHHHHH
Confidence 99998888777666544
No 253
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.32 E-value=1.1e-06 Score=82.99 Aligned_cols=125 Identities=15% Similarity=0.087 Sum_probs=98.4
Q ss_pred HHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcch--------HHHHHHHHHHHHhhccccchhhhheeecccC
Q 009563 140 CMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPN--------YSTYVVLRMLTGFSTGGVGLCAFVLATEPVG 211 (532)
Q Consensus 140 ~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 211 (532)
+..|..+...+.|+ .|||++.+.|.+++.+..+..+...| ...+.+..++.-+|- ......+-+|.+|
T Consensus 361 ~vPGyw~tv~~id~-iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGP---n~ttfivpaE~FP 436 (538)
T KOG0252|consen 361 TVPGYWFTVYFIDI-IGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGP---NATTFIVPAEIFP 436 (538)
T ss_pred cCCceeEEEEEeeh-hhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCC---CceeEEeehhhch
Confidence 34477788889999 99999999999999999999888766 122333344444443 3345567789999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhh--------chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 212 PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ--------TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 212 ~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--------~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
.+-|+...++.....-.|.+++...-..+. +.|+.+++.+...++.. +..+++||+.
T Consensus 437 arvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi-~~T~l~pEtk 501 (538)
T KOG0252|consen 437 ARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGI-LFTLLIPETK 501 (538)
T ss_pred HHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhH-heeEEeeccc
Confidence 999999999999999999999887666554 78999999999888866 7778888985
No 254
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.28 E-value=8.6e-05 Score=68.51 Aligned_cols=118 Identities=15% Similarity=0.142 Sum_probs=69.2
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCCchHHHHH-HHHHHHHHHHHHhh---------
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSD-----SRLGRKGSLTV-VCMMNAVFGCLTAF--------- 177 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~d-----r~~Grr~~l~~-~~~~~~~~~~~~~~--------- 177 (532)
|.+.+.-|+ |-++.+...-++ ..+ .--++|.++.| | +||||.-++ +..+.+..+.+.+.
T Consensus 54 P~lL~ak~v---Syt~~a~fS~ay-~P~-sLKllWaPiVDs~y~k~-~GrrksWvvp~q~llG~~mllLs~~v~~~~g~n 127 (510)
T KOG3574|consen 54 PLLLQAKGV---SYTSQAIFSFAY-WPF-SLKLLWAPIVDSVYSKR-FGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGN 127 (510)
T ss_pred HHHhcCCCc---chhhhhhhhhhh-hHH-HHHHHHHhhhHHHHHHh-hccccceeeehHHHHHHHHHHHhhCCCcccccC
Confidence 666666666 666666543322 122 23567888888 8 999986433 22222333322222
Q ss_pred --cchHHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 009563 178 --SPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGI 236 (532)
Q Consensus 178 --~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l 236 (532)
.++...+....++.-+.++.-..++-.+.-.+..+++-|.+......+...|.+++..+
T Consensus 128 g~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 128 GGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred CCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcce
Confidence 23333343445566666666666666666666777888888777777777777766544
No 255
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.28 E-value=3.4e-06 Score=60.51 Aligned_cols=69 Identities=13% Similarity=0.201 Sum_probs=64.6
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYV 185 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 185 (532)
|.+++|.++ |..+.|++.+..++||.+|++...++.++ ..+++.+..+.+...+..+.+++.++.+.+.
T Consensus 16 P~M~~~~~l---s~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 16 PLMQADGGL---SLSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 999999999 99999999999999999999999999998 7889999999999999999999998876543
No 256
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.14 E-value=2.6e-08 Score=99.98 Aligned_cols=137 Identities=22% Similarity=0.225 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcc
Q 009563 376 LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTT 455 (532)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (532)
.......++.++|.++.|++.||+|||+.+..+..+..++.++..+.+.....+ .+.+.-++.|++.++..+....++.
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~R~~~G~~~g~~~~~~~~~~~ 128 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFW-MLLIGRFLIGFGIGGAYVVSPIYIS 128 (451)
T ss_pred HHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccc
Confidence 344555678889999999999999999999999999999998888877331111 5667778899999999999999999
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHH-----hh---hhhHHHHHHHHHHHHHHHHhhccCC
Q 009563 456 ELFPTVVRNAALGCATQAAQLGAILAPFVVV-----LG---GWLPFAVFAACGIIGGLFAFYLPET 513 (532)
Q Consensus 456 ~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (532)
|..|++.|+...++.+....+|..++..+.. .+ +...+.+.++..++..+...++||+
T Consensus 129 E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 129 EIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999998888888777766551 11 3334444455554444445666764
No 257
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.14 E-value=3.1e-05 Score=69.25 Aligned_cols=104 Identities=12% Similarity=-0.000 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccc---hhHHHHHHHHHHHHHHHHhhhhhHhhhccc
Q 009563 380 VNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNG---IWKIVRMICGVMGIFGVAGTYNLLFIYTTE 456 (532)
Q Consensus 380 ~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (532)
...++..+ .++.|.+.|++|++.++.++.+...++...++...... ...+...+...+.+.+.............+
T Consensus 45 ~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~ 123 (250)
T PF06813_consen 45 AGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVR 123 (250)
T ss_pred HHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHH
Confidence 33455544 47889999999999999999999999988887764332 111133334444444444444555666678
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 457 LFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 457 ~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
.|| ++||++.|+.-....+++.+...+.
T Consensus 124 NFP-~~RG~vvgilk~~~GLSaai~t~i~ 151 (250)
T PF06813_consen 124 NFP-RSRGTVVGILKGFFGLSAAIFTQIY 151 (250)
T ss_pred hCc-cccCceehhhhHHHHhHHHHHHHHH
Confidence 897 5799999999999999888877766
No 258
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.10 E-value=2.5e-05 Score=64.25 Aligned_cols=107 Identities=16% Similarity=0.116 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecccC
Q 009563 132 VQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVG 211 (532)
Q Consensus 132 ~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 211 (532)
-.++.+....+++++.+.+.++ +|.|+.+++|.+...+-.... +-++.+.++.+-++.|++.+..++..-.++.+..+
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 3455666677888888999998 999999999999988655443 45778899999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009563 212 PSKRGAAGMSTFYFFSTGIALLSGIAYIF 240 (532)
Q Consensus 212 ~~~r~~~~~~~~~~~~~G~~~~~~l~~~l 240 (532)
+++|++..++.-.....+.++|.++...+
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888877777765443
No 259
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.09 E-value=2.5e-06 Score=82.06 Aligned_cols=135 Identities=18% Similarity=0.078 Sum_probs=116.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFV 204 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 204 (532)
.+...|.....-..|-++.-++.+++..| +|+-+++.+++.+..+=.+..+..+|.|+.+...+++|+..+..+..+.+
T Consensus 404 ~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~s 482 (618)
T KOG3762|consen 404 IKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIIS 482 (618)
T ss_pred cceeeeehhhhhccchHHHHHHHHHHHHH-hcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHH
Confidence 44455555566666777888899999999 99999999999999999999999999999999999999999999999999
Q ss_pred eeecccCCCchhHHHHHHHH-HHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHH
Q 009563 205 LATEPVGPSKRGAAGMSTFY-FFSTGIALLSGIAYIFQ---TWRALYIASSIPSILFLLI 260 (532)
Q Consensus 205 ~i~~~~~~~~r~~~~~~~~~-~~~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~ 260 (532)
|++...||+.|..+.++.+. ..++|-.+|.++|+.+. +=|..|++.++.+++.+++
T Consensus 483 Y~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 483 YASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLAL 542 (618)
T ss_pred HHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHH
Confidence 99999999999999988754 55788888889988887 7788898888888776633
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.08 E-value=6.7e-05 Score=73.06 Aligned_cols=139 Identities=21% Similarity=0.196 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCC-chhHHHHHHHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHHHHhhhhhHh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDKLGR-KPMTIGTLWFSGFFCLLGSLVKNNGI-WKIVRMICGVMGIFGVAGTYNLLF 451 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~~gr-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 451 (532)
.+.......++..+++++.++...|.+. |+.++.+.+++.++.++......... +.++++++=++.|++. +.....-
T Consensus 73 fG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~-~n~a~lR 151 (488)
T KOG2325|consen 73 FGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV-GNFAVLR 151 (488)
T ss_pred hhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc-ccHHHHH
Confidence 3455566778888999999999999875 78888999999999988854433332 4335666666777664 4456778
Q ss_pred hhccccccchhhhhHHHHHHHHHHHHHHHHHHHH----Hhh--------------hhhHHHHHHHHHHHHHHHH-hhccC
Q 009563 452 IYTTELFPTVVRNAALGCATQAAQLGAILAPFVV----VLG--------------GWLPFAVFAACGIIGGLFA-FYLPE 512 (532)
Q Consensus 452 ~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~----~~~--------------~~~~~~~~~~~~~~~~~~~-~~l~~ 512 (532)
.|+++..-.++|.++++..+....+|.++||.+. .++ +..+-++.+++.++..++. ++++|
T Consensus 152 ~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 152 AYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred HHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 8888877778889998888887778888888776 111 4456667777777666655 44554
Q ss_pred C
Q 009563 513 T 513 (532)
Q Consensus 513 ~ 513 (532)
.
T Consensus 232 ~ 232 (488)
T KOG2325|consen 232 V 232 (488)
T ss_pred c
Confidence 3
No 261
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.06 E-value=0.0082 Score=59.68 Aligned_cols=155 Identities=14% Similarity=0.105 Sum_probs=97.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHhhccCCCceeccCCCCCCCCCcccCCCCCcceecCCCCCceeecccccchhhh
Q 009563 48 EFGPWQLRHFVLTSLAWALEAFHTMVMIFADREPEYNCLGQGCDPGEKTVCGLEPGSWAWTGGDGSSTVTQWGLFCEEKY 127 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~s~~ 127 (532)
|..+..+..++.+.+..++..+.....=.+ . | .-+.+..| +.
T Consensus 17 pi~~~E~~k~~~l~~m~f~i~f~y~~lR~~--------K-------D------------------~lvvt~~g-----ae 58 (491)
T PF03219_consen 17 PIHRSELKKFLPLALMFFFILFNYTILRDL--------K-------D------------------TLVVTAQG-----AE 58 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHh--------c-------C------------------eEEEecCC-----hh
Confidence 455677777777777777766665444333 1 0 22222222 34
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc---------c------------------
Q 009563 128 KVGLVQALFFF-GCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS---------P------------------ 179 (532)
Q Consensus 128 ~~~~~~s~~~l-~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~---------~------------------ 179 (532)
.+..+-....+ +..+...+..+++++ ++|.+++-+....+.....++++. +
T Consensus 59 ~I~flK~~~vlP~a~~f~~~y~kl~n~-~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~ 137 (491)
T PF03219_consen 59 VIPFLKVWGVLPVAILFTILYSKLSNR-LSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGF 137 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHH
Confidence 55555554444 345567788999999 999998887777666666655542 1
Q ss_pred ----hHHHHHHHHHHHHhhccccch-hhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 180 ----NYSTYVVLRMLTGFSTGGVGL-CAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 180 ----~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
+.|.+.+..++.-+-...... .-..+..|.++.+|-.|..+++..+.++|.++++.+...+.
T Consensus 138 i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~ 204 (491)
T PF03219_consen 138 IAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFS 204 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222222222222222222 34678899999999999999999999999999887766654
No 262
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.87 E-value=0.00045 Score=68.15 Aligned_cols=123 Identities=15% Similarity=0.027 Sum_probs=109.9
Q ss_pred ceeecccccchhhhHHHHHHHHHHHHHHHHHHHHH-hhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFG-HLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g-~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
.+...|++ ++.+.+...+...+...+++++.. .+... +|-|+++..|+..-.+...+.+++++.|+++....+.+
T Consensus 267 yl~~~f~w---~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~ 342 (463)
T KOG2816|consen 267 YLKAKFGW---NKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVA 342 (463)
T ss_pred EEeeecCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHH
Confidence 56778899 999999988888888888888888 66666 89999999999999999999999999999999999888
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
+ .+...+...++++.+..++++|++.++.+....+...+++.+-+.+.
T Consensus 343 ~-~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 343 L-AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred h-hcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 8 56788999999999999999999999999999999999888766653
No 263
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.86 E-value=0.033 Score=54.14 Aligned_cols=128 Identities=12% Similarity=0.023 Sum_probs=88.5
Q ss_pred ceeecccccchhhhHHHHHHHHHHH-HHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc---------ch---
Q 009563 114 STVTQWGLFCEEKYKVGLVQALFFF-GCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS---------PN--- 180 (532)
Q Consensus 114 ~i~~~~~~~~~s~~~~~~~~s~~~l-~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~---------~~--- 180 (532)
.+++.+.+....+..++++-+..-+ +..+..++.+++.++ +.|.+++-+-+..+....+++++. ++
T Consensus 48 ~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~-lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~ 126 (509)
T COG3202 48 SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNI-LTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEF 126 (509)
T ss_pred HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHH
Confidence 4445555433356677888887777 677889999999999 999999988888888887777753 11
Q ss_pred --------------------HHHHHHHHHHHHhhccccch-hhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009563 181 --------------------YSTYVVLRMLTGFSTGGVGL-CAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYI 239 (532)
Q Consensus 181 --------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~ 239 (532)
.|...+..++.=+=...+.. .-.....|.+..+|-.|..++++.+.+++..++..+..+
T Consensus 127 ~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~ 206 (509)
T COG3202 127 SRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSW 206 (509)
T ss_pred HHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 12222222222221122222 234566788888999999999999999999999888888
Q ss_pred hhc
Q 009563 240 FQT 242 (532)
Q Consensus 240 l~~ 242 (532)
+..
T Consensus 207 ~~k 209 (509)
T COG3202 207 LSK 209 (509)
T ss_pred Hhh
Confidence 763
No 264
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.70 E-value=0.00078 Score=65.59 Aligned_cols=103 Identities=14% Similarity=0.182 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHhhc---ch------HHHHHHHHHHHHhhccccchhhhheeecccCCC---chhHHHHHHHHHH
Q 009563 159 GSLTVVCMMNAVFGCLTAFS---PN------YSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPS---KRGAAGMSTFYFF 226 (532)
Q Consensus 159 ~~l~~~~~~~~~~~~~~~~~---~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 226 (532)
+++++|.++..+|.++..++ .+ .+.++++-++.++|.|+.-|....+++|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888889998884433 22 367899999999999999999999999999865 4667788899999
Q ss_pred HHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHH
Q 009563 227 STGIALLSGIAYIFQ---TWRALYIASSIPSILFLLII 261 (532)
Q Consensus 227 ~~G~~~~~~l~~~l~---~wr~~f~~~~~~~~~~~~~~ 261 (532)
++|..++..+.+++. +|.+.|.+.++..++..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 999999998887776 99999999888777766333
No 265
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.65 E-value=0.002 Score=61.68 Aligned_cols=114 Identities=19% Similarity=0.208 Sum_probs=83.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHH---HHHHHHhhcchHHHHHHHHHHHHhhccccchh
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNA---VFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLC 201 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 201 (532)
-.++..+....|.+|-.++.--...+ | +-+-+++.+--.+.. +.....-+.++.|.+++.-+..|+..|..++.
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--r-ir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVN 355 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--R-IRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVN 355 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--e-hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 46788888888888877765443322 3 422222222222222 22223335688999999999999999999999
Q ss_pred hhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 202 AFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 202 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
....+.|-.++++|...++..+.+-++|..++..++-.+.
T Consensus 356 tF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 356 TFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887764
No 266
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.62 E-value=0.00029 Score=50.29 Aligned_cols=52 Identities=17% Similarity=0.371 Sum_probs=46.2
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMN 168 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~ 168 (532)
|...++.|+ +..|+|.+.++..+...++.+++|.++|| +|+++.++....+.
T Consensus 24 ~~~~~~~Gl---~~~~iGil~~i~~~~~~~~~pl~g~laDk-~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 24 PLYLKQLGL---SPSQIGILSAIRPLIRFLAPPLWGFLADK-FGKRKVILLGSLFM 75 (77)
T ss_pred hHhhhhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCccHHHHHHHHHH
Confidence 666678999 99999999999999999999999999999 99988887766553
No 267
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.57 E-value=0.0048 Score=58.98 Aligned_cols=109 Identities=13% Similarity=0.066 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhcc---c-hhHHHHHHHHHHHHHHHHhhhhhHh
Q 009563 376 LNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNN---G-IWKIVRMICGVMGIFGVAGTYNLLF 451 (532)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (532)
+...+..+..++..+.+.|+.||+|-|....++..+.+++..+=...... + .+.-+......+.+...........
T Consensus 83 wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPs 162 (480)
T KOG2563|consen 83 WLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPS 162 (480)
T ss_pred HHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhcccc
Confidence 44455566777888899999999999999999999998888776554332 1 1111334444444444433333434
Q ss_pred hhccccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 009563 452 IYTTELFPTVVRNAALGCATQAAQLGAILAPFV 484 (532)
Q Consensus 452 ~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~ 484 (532)
-...--+|+++|+++..+..+.+.+|.+++-++
T Consensus 163 kiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 163 KIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 455556899999999999998888887766443
No 268
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.51 E-value=0.015 Score=54.30 Aligned_cols=137 Identities=16% Similarity=0.174 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIY 453 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (532)
.........+.+.+...+.|.+.||+|||+..+...++..++++.... ++.. .+++.=++.|++....++..-++
T Consensus 71 Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~-~~~~----~L~~GRvlgGiaTSLLfS~FEsW 145 (354)
T PF05631_consen 71 IAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS-SNYP----VLLLGRVLGGIATSLLFSAFESW 145 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-cccH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444566677788999999999999998888888888864332 2211 56677778888887777755443
Q ss_pred c-c----ccccchhhhhHHHHHHHH-HHHH----HHHHHHHH-H--hhhhhHHHHHHHHHHHHHHHHh-hccCCCC
Q 009563 454 T-T----ELFPTVVRNAALGCATQA-AQLG----AILAPFVV-V--LGGWLPFAVFAACGIIGGLFAF-YLPETLN 515 (532)
Q Consensus 454 ~-~----~~~p~~~r~~~~g~~~~~-~~~g----~~i~p~~~-~--~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~ 515 (532)
. . .-+|++..+..++..... +.+- +.++..+. . .|...+|.....+.+++.++.. ..+|..+
T Consensus 146 ~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 146 MVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCC
Confidence 3 2 235666666666544422 2222 33333333 2 3457788888888777776654 3355443
No 269
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.36 E-value=0.0048 Score=50.88 Aligned_cols=98 Identities=13% Similarity=-0.038 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchh
Q 009563 383 VAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVV 462 (532)
Q Consensus 383 ~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 462 (532)
....+..++.+.+.+++|.|+.++++.+...+......... . +..+....+.|++.+..+...-.++.+...++.
T Consensus 48 ~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~---~--~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~ 122 (156)
T PF05978_consen 48 GSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPN---S--YTLYPASALLGFGAALLWTAQGTYLTSYSTEET 122 (156)
T ss_pred HHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhh---H--HHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH
Confidence 44556778889999999999999999888776665543321 1 167788889999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Q 009563 463 RNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 463 r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+++-.++...+...+.++|..+.
T Consensus 123 ~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 123 IGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888887777655
No 270
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.31 E-value=0.0087 Score=53.01 Aligned_cols=51 Identities=10% Similarity=0.146 Sum_probs=34.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHH--HH-----Hhh-chHHHHHHHHHHHHHHHHHHhc
Q 009563 213 SKRGAAGMSTFYFFSTGIALLSGI--AY-----IFQ-TWRALYIASSIPSILFLLIILP 263 (532)
Q Consensus 213 ~~r~~~~~~~~~~~~~G~~~~~~l--~~-----~l~-~wr~~f~~~~~~~~~~~~~~~~ 263 (532)
|+|+........+.++|.++.... -. .+. +|++++.+.+++.++.+++..+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~i 60 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYII 60 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777777788888888765432 11 111 8999999988887776633333
No 271
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.27 E-value=0.0065 Score=59.33 Aligned_cols=120 Identities=19% Similarity=0.078 Sum_probs=92.3
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh------cc----hHHHHHHH
Q 009563 118 QWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAF------SP----NYSTYVVL 187 (532)
Q Consensus 118 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~------~~----~~~~l~~~ 187 (532)
.-|+ ++..+|..-+...+....+.+...++.+| +|..+.-+++.....++..++.. .+ +...++.+
T Consensus 287 ~~G~---s~~~igi~R~~gav~Gl~gT~~~p~l~~r-iGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~g 362 (432)
T PF06963_consen 287 SQGY---SPSVIGIFRGLGAVFGLLGTWVYPWLMKR-IGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGG 362 (432)
T ss_pred HCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHH
Confidence 3378 99999999999999999999999999999 99999888887655544443332 12 33444445
Q ss_pred HHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 188 RMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 188 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
-.+.=+|.=+......-++.|..|+++||...+.-....++-.++...++-.+.
T Consensus 363 i~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 363 IALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 555555555667778889999999999999999999888888887777665553
No 272
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.20 E-value=0.011 Score=61.35 Aligned_cols=122 Identities=16% Similarity=0.111 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHhh-hCCchhHHHHHHHHHHHHHHHHhhhccc----hhHHHHHHHHHHHHHHHHhhhhhHhhhccccccc
Q 009563 386 MPAFTITAVLLDK-LGRKPMTIGTLWFSGFFCLLGSLVKNNG----IWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPT 460 (532)
Q Consensus 386 ~~~~~~~~~l~d~-~gr~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 460 (532)
-+..+++|++.|+ +|+++.+.++.++..++..++.+..... ......++++.+...|.++.-|...+...|.+++
T Consensus 37 yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~ 116 (654)
T TIGR00926 37 YLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE 116 (654)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc
Confidence 3566788899987 7999999999998888887776642211 1111355667777788888888888998888875
Q ss_pred h---hhhhHHHHHHHHHHHHHHHHHHHH-Hh-----------hhhhHHHHHHHHHHHHHHHH
Q 009563 461 V---VRNAALGCATQAAQLGAILAPFVV-VL-----------GGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 461 ~---~r~~~~g~~~~~~~~g~~i~p~~~-~~-----------~~~~~~~~~~~~~~~~~~~~ 507 (532)
+ .+...+.+.....++|+++++.+. .. ++...|.+.+++.+++.++.
T Consensus 117 ~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 117 RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHH
Confidence 3 366777778888889988887766 11 24445666666666555544
No 273
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.14 E-value=0.042 Score=52.45 Aligned_cols=55 Identities=11% Similarity=-0.008 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 431 VRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+.++...+.++..|-...+.+.++.+..|++++..+-.+.......|-+.|..+.
T Consensus 345 ~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 345 WFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred HHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 5667777888888888888999999999988876666666655555555555443
No 274
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.07 E-value=0.096 Score=51.97 Aligned_cols=98 Identities=11% Similarity=-0.011 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhh--hccch--------------------------hHHHHHHHHHH
Q 009563 387 PAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLV--KNNGI--------------------------WKIVRMICGVM 438 (532)
Q Consensus 387 ~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~--~~~~~--------------------------~~~~~~~~~~~ 438 (532)
+..++-+++++|++|++++...........+++.+. +.... .| ...+..+.
T Consensus 59 ~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W-~~~~FYv~ 137 (472)
T TIGR00769 59 IFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIW-SFALFYVM 137 (472)
T ss_pred HHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhh-hHHHHHHH
Confidence 336778999999999998876665555555555443 11100 11 12223333
Q ss_pred HHHHHHhhhh-hHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 439 GIFGVAGTYN-LLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 439 ~~~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
.........+ +.|.+++|.+..++..+-.++....+++|.++++.+.
T Consensus 138 ~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 138 AELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555 7899999999999999999999999999999999777
No 275
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.04 E-value=0.012 Score=58.32 Aligned_cols=141 Identities=16% Similarity=0.123 Sum_probs=88.4
Q ss_pred cchHHHHHHHHHHHHH--HHHHHHHHHHhhh-----CCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 009563 371 QTNLYLNVLVNAVAEM--PAFTITAVLLDKL-----GRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGV 443 (532)
Q Consensus 371 ~~~~~~~~~~~~~~~~--~~~~~~~~l~d~~-----gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (532)
+.+.........+..+ ...++.|.++|-+ .||+.++++.++..++.+.+...+..........++.++..++.
T Consensus 21 ~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~ 100 (433)
T PF03092_consen 21 GLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGY 100 (433)
T ss_pred CCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHH
Confidence 3334333333333333 4667899999986 35566677777776666666665553222224455666667777
Q ss_pred HhhhhhHhhhcccccc--chhhhhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHhhcc
Q 009563 444 AGTYNLLFIYTTELFP--TVVRNAALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAFYLP 511 (532)
Q Consensus 444 ~~~~~~~~~~~~~~~p--~~~r~~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ 511 (532)
...-.+.-+...|... ++.++...+.......+|++++..+. ..++...|.+.+.+..+..+..+++.
T Consensus 101 a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~ 175 (433)
T PF03092_consen 101 AFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLL 175 (433)
T ss_pred HHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhh
Confidence 7777777778778763 23377888888888888887776555 44566677777776666655554443
No 276
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.84 E-value=0.00033 Score=65.99 Aligned_cols=106 Identities=10% Similarity=-0.065 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh-CCchhHHHHHHHHHHHHHHHHhhhcc---------chhHHHHHHHHHHHHHHHHhhh
Q 009563 378 VLVNAVAEMPAFTITAVLLDKL-GRKPMTIGTLWFSGFFCLLGSLVKNN---------GIWKIVRMICGVMGIFGVAGTY 447 (532)
Q Consensus 378 ~~~~~~~~~~~~~~~~~l~d~~-gr~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 447 (532)
.....++.++|+.+..+..-+. .+|++. +..++=.+..-++...... -...++.++..+++++..|-..
T Consensus 188 fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 188 FLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 3455677888888877643221 234333 3222222222222222100 0111256677788888888888
Q ss_pred hhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 009563 448 NLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFV 484 (532)
Q Consensus 448 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~ 484 (532)
+....+..+..++++|..+..+....-.+|-.+|..+
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp HHHH---------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999998888888777777666676666554
No 277
>PRK03612 spermidine synthase; Provisional
Probab=96.77 E-value=0.064 Score=54.32 Aligned_cols=140 Identities=15% Similarity=0.027 Sum_probs=80.9
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH---HHHH----hhcchH-HHHHHHHH
Q 009563 118 QWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVF---GCLT----AFSPNY-STYVVLRM 189 (532)
Q Consensus 118 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~---~~~~----~~~~~~-~~l~~~r~ 189 (532)
-+|- +..+.+.+.+++.+|.++|+.+++++.++ ..++...+-..+..++ ..+. ++...+ ..++..-+
T Consensus 44 ~~G~---s~~~~~~ii~~fl~glalGs~l~~~~~~~--~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 118 (521)
T PRK03612 44 LLGD---SVTQFSTVIGLMLFAMGVGALLSKYLLRD--AAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVL 118 (521)
T ss_pred HhCc---hHHHHHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455 78889999999999999999999988754 3333332222221111 1111 111111 22334455
Q ss_pred HHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHHHHHhc
Q 009563 190 LTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ----TWRALYIASSIPSILFLLIILP 263 (532)
Q Consensus 190 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~----~wr~~f~~~~~~~~~~~~~~~~ 263 (532)
+.|+..|+..|....+..+.. .++-+...+-......+|.++|.++.+++. |-....++.+.+.++..++.++
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~ 195 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLW 195 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 677778888887766655432 123456667777888888888888777665 4333344444444444433333
No 278
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.37 E-value=0.018 Score=59.17 Aligned_cols=135 Identities=17% Similarity=0.186 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhh-------------------c-------------------
Q 009563 383 VAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVK-------------------N------------------- 424 (532)
Q Consensus 383 ~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~-------------------~------------------- 424 (532)
++.++......+...|.-|-+.+-++.++++++.++..+.+ .
T Consensus 143 ig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 222 (735)
T KOG3626|consen 143 IGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPS 222 (735)
T ss_pred cchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCC
Confidence 44455555566666677777788888888888888876641 0
Q ss_pred --------c--chhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH---------
Q 009563 425 --------N--GIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV--------- 485 (532)
Q Consensus 425 --------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~--------- 485 (532)
. ...+.++++..++.|+|....+++..+|+-|...++.-....|+..++..+|-++|=.+.
T Consensus 223 ~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD 302 (735)
T KOG3626|consen 223 PENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVD 302 (735)
T ss_pred CCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeec
Confidence 0 013346677788888888889999999999999999989999999988776655543333
Q ss_pred --------------Hhh-hhhHHHHHHHHHHHHHHHHhhccCCCCCC
Q 009563 486 --------------VLG-GWLPFAVFAACGIIGGLFAFYLPETLNKP 517 (532)
Q Consensus 486 --------------~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 517 (532)
..| ++..|++.+.+.++..+.++++|+..+++
T Consensus 303 ~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~ 349 (735)
T KOG3626|consen 303 FGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKS 349 (735)
T ss_pred cccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccc
Confidence 122 56678888999999888889988765543
No 279
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.24 E-value=0.2 Score=49.21 Aligned_cols=112 Identities=19% Similarity=0.220 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC--CCCchHHHHHHHHHHHHHHHHHhhc------------------chHHHHHHH
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDS--RLGRKGSLTVVCMMNAVFGCLTAFS------------------PNYSTYVVL 187 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr--~~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~ 187 (532)
..++..-...+|..++..+.+.+.+| ++||++.+.++.++..++.++.-.. +++...++.
T Consensus 280 ~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii 359 (461)
T KOG3098|consen 280 LIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALII 359 (461)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHH
Confidence 34444444555566666677777754 3899999999999998888877543 246677888
Q ss_pred HHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009563 188 RMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF 240 (532)
Q Consensus 188 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l 240 (532)
-++.|++-+......+.++.+.+ +++|..+.++...-..++..++.......
T Consensus 360 ~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 360 GFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 89999999999999999999999 67889888888888888777665554443
No 280
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.24 E-value=0.18 Score=48.68 Aligned_cols=123 Identities=15% Similarity=0.069 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhh
Q 009563 386 MPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNA 465 (532)
Q Consensus 386 ~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~ 465 (532)
++..+....+.|.++.|++++++.+...+...++.+..+.. ...+..++.|...+. -....+++-...|+++--+
T Consensus 55 l~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~----~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~ 129 (412)
T PF01770_consen 55 LAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVL----AMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQK 129 (412)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHH----HHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHH
Confidence 34455667789999999999998888887777777664433 355566666655433 4455677777778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHH----Hhh---hhhHHHHHHHHHHHHHHHHhhccCC
Q 009563 466 ALGCATQAAQLGAILAPFVV----VLG---GWLPFAVFAACGIIGGLFAFYLPET 513 (532)
Q Consensus 466 ~~g~~~~~~~~g~~i~p~~~----~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (532)
+.+.......+|.+++..+. ..+ +.....+......++.+..+++|..
T Consensus 130 vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 130 VTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88888877766666655555 322 3444445555555666666777643
No 281
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.07 E-value=0.00094 Score=67.68 Aligned_cols=136 Identities=15% Similarity=0.138 Sum_probs=2.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhc---------------------------------
Q 009563 378 VLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKN--------------------------------- 424 (532)
Q Consensus 378 ~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~--------------------------------- 424 (532)
....-++.++..++..++.+|..|-+.+-.+.++++++.+++.+.+-
T Consensus 44 ~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 123 (539)
T PF03137_consen 44 SSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQAS 123 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccccccccccccccccc
Confidence 33444566667777777777777777888888888888888765410
Q ss_pred -------------cchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH------
Q 009563 425 -------------NGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV------ 485 (532)
Q Consensus 425 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~------ 485 (532)
......+++++.++.|++....+++..+|+-|..+++..+...|+......+|-++|=.+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~ 203 (539)
T PF03137_consen 124 SDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRI 203 (539)
T ss_dssp ----------------------------SSS-------------------------------------------------
T ss_pred CccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhc
Confidence 0011235667778888899999999999999999999989999998887766654442222
Q ss_pred --------------------Hhh-hhhHHHHHHHHHHHHHHHHhhccCC
Q 009563 486 --------------------VLG-GWLPFAVFAACGIIGGLFAFYLPET 513 (532)
Q Consensus 486 --------------------~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (532)
..| ++..|++.+++.++..+..+.+|+.
T Consensus 204 yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 204 YVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp -------------------------------------------------
T ss_pred eeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 012 4556777777777777777776653
No 282
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.85 E-value=0.28 Score=45.74 Aligned_cols=109 Identities=24% Similarity=0.216 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYT 454 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
........+...++.++.|.+.||.|||+.+..+.....++.+...+... ...+ ...+.....+++.+...+....+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~g~~~~~~~~~~~~~~ 119 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN-VGLA-LLLILRLLQGLGGGGLLPVASALL 119 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc-chHH-HHHHHHHHHHhhhHHHHHHHHHHH
Confidence 33344445556667789999999999997777766554444344444433 1111 344444446777778888999999
Q ss_pred cccccc-hhhhhHHHHHHH-HHHHHHHHHHHHH
Q 009563 455 TELFPT-VVRNAALGCATQ-AAQLGAILAPFVV 485 (532)
Q Consensus 455 ~~~~p~-~~r~~~~g~~~~-~~~~g~~i~p~~~ 485 (532)
.|..|. +.|+...+.... ...+|..++|.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (338)
T COG0477 120 SEWFPEATERGLAVGLVTLGAGALGLALGPLLA 152 (338)
T ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987 677888888877 4666777777554
No 283
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=95.66 E-value=0.053 Score=49.19 Aligned_cols=125 Identities=10% Similarity=0.015 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHhhccC-CCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecccCCCch
Q 009563 137 FFGCMIGAGVFGHLSDS-RLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKR 215 (532)
Q Consensus 137 ~l~~~~~~~~~g~l~dr-~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 215 (532)
.+...+..+....+.|| .||.|. .+..++.+.+.++.+++++.++-+++-.+..++.|.-...-.++-+. ++
T Consensus 72 ilPsL~iKl~~Pff~~rfpf~~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~-Y~---- 144 (409)
T KOG3880|consen 72 ILPSLAIKLTAPFFIHRFPFGFRI--ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR-YP---- 144 (409)
T ss_pred hhHHHHHHHhchhhhhhcccchHH--HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-CC----
Confidence 33444455555666676 255554 45556777888889999999999999999888888765544433222 21
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHHHhcccccC
Q 009563 216 GAAGMSTFYFFSTGIALLSGIAYIFQ-----TWRALYIASSIPSILFLLIILPFLPES 268 (532)
Q Consensus 216 ~~~~~~~~~~~~~G~~~~~~l~~~l~-----~wr~~f~~~~~~~~~~~~~~~~~~~es 268 (532)
....+-++.+.+...++|..--..+. .-|...++...+.++.+...++.++++
T Consensus 145 ~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 145 SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 22233334444433444433222222 556777777766666663445555443
No 284
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.53 E-value=0.18 Score=35.90 Aligned_cols=60 Identities=15% Similarity=0.128 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhhhccccCcchHHHHHH---HHHHHHHHHHHHHHHHHhhhCCchhHHHHHHH
Q 009563 352 INFLCSVVYYGISLNVVNLQTNLYLNVL---VNAVAEMPAFTITAVLLDKLGRKPMTIGTLWF 411 (532)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~ 411 (532)
.+...+..+-..+.+..+.+.+...... +.-+..+++.++.|.++||+++++.......+
T Consensus 12 ~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3333444444556666666655554444 34456778999999999999999887765544
No 285
>PRK03612 spermidine synthase; Provisional
Probab=95.49 E-value=1.3 Score=45.07 Aligned_cols=51 Identities=12% Similarity=0.051 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 434 ICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
...++.++..++..|...-+..+... +.-+...|-.+....+|+++|+++.
T Consensus 115 ~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~ 165 (521)
T PRK03612 115 VLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAF 165 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHH
Confidence 34445567777777776655554322 1234555666666666766666555
No 286
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.83 E-value=0.21 Score=48.68 Aligned_cols=107 Identities=12% Similarity=0.042 Sum_probs=74.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhhccch-----hHHHHHHHHHHHHHHHHhhhhhHhhhccccccch---hhhhHHHHHHHHH
Q 009563 403 PMTIGTLWFSGFFCLLGSLVKNNGI-----WKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTV---VRNAALGCATQAA 474 (532)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~r~~~~g~~~~~~ 474 (532)
+++.++.++..++.+++.+...... .....++.+.+.++|.++.-|...++..|.++++ .|...+.......
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 4567777888888777544422211 1115677788889999999999999999999765 4566777777888
Q ss_pred HHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHHhh
Q 009563 475 QLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFAFY 509 (532)
Q Consensus 475 ~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
++|..+++.+. ..++...|.+.++..+++.+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 89988887665 355777777777777776655443
No 287
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=94.33 E-value=1.2 Score=41.95 Aligned_cols=52 Identities=13% Similarity=0.040 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 434 ICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+.....-+|.-+.-....-...|..|++.|..+.|+.|..+.....+--++.
T Consensus 391 agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilv 442 (503)
T KOG2601|consen 391 AGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDILV 442 (503)
T ss_pred HHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEE
Confidence 3333334444444456667788999999999999999999887776665554
No 288
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.08 E-value=1.8 Score=42.99 Aligned_cols=110 Identities=21% Similarity=0.276 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCch--HHHHHH--HHHHHHHHHHHhh---------cchHHHHHHHHHHHHhh
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRK--GSLTVV--CMMNAVFGCLTAF---------SPNYSTYVVLRMLTGFS 194 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr--~~l~~~--~~~~~~~~~~~~~---------~~~~~~l~~~r~l~G~~ 194 (532)
..-++...|.+|-.+|..+..+.. . -++| .+.... =+++.--.++|.. -++-+..++..++.|+.
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~-p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-W-PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-e-eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHh
Confidence 445667778888888888665432 1 1222 332222 2223333334432 24667777889999999
Q ss_pred ccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009563 195 TGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYI 239 (532)
Q Consensus 195 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~ 239 (532)
.|-....+..+..+..++++|..+..+...+..+|..+|..++..
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999888877544
No 289
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.74 E-value=8.5 Score=38.76 Aligned_cols=101 Identities=14% Similarity=0.029 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhh--hcc-----ch-------------hH-------HHHHHHHH
Q 009563 385 EMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLV--KNN-----GI-------------WK-------IVRMICGV 437 (532)
Q Consensus 385 ~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~--~~~-----~~-------------~~-------~~~~~~~~ 437 (532)
.++..++-.++.++++|.++..+..........++++. +.. +. .+ |...+..+
T Consensus 72 a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv 151 (491)
T PF03219_consen 72 AILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYV 151 (491)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Confidence 44556677889999999988766555555544444443 110 00 00 01111112
Q ss_pred HHHHHHHhhhh-hHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 438 MGIFGVAGTYN-LLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 438 ~~~~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
..-.......+ ..|.+++|.++.++..+..++....+++|.++++.+.
T Consensus 152 ~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~ 200 (491)
T PF03219_consen 152 MAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLT 200 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222223333 5699999999999999999999999999998887776
No 290
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=92.62 E-value=0.54 Score=42.98 Aligned_cols=116 Identities=18% Similarity=0.151 Sum_probs=81.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhhe
Q 009563 126 KYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVL 205 (532)
Q Consensus 126 ~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 205 (532)
..|+-|....|.+|-.++.--....--++.=--.++-.-.+++.+...+..+.++++..++.-+..|+-.|..++...--
T Consensus 287 ~sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~ 366 (409)
T KOG3880|consen 287 DSQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHN 366 (409)
T ss_pred hhcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHH
Confidence 45678888888887544322211111100000112233345555666667788999999999999999889889888888
Q ss_pred eecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 206 ATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 206 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
+.+-.++++|-.+++...++-++|..++..++-.+.
T Consensus 367 i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 367 IHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 888788899999999999999999998888775553
No 291
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=91.72 E-value=4.3 Score=38.69 Aligned_cols=96 Identities=18% Similarity=0.207 Sum_probs=47.3
Q ss_pred HHHHHHHh-----hhCCchhHH-HHHHHHHHHHHHHHhhhccc------hhH-HHHHHHHHHHHHHHHhhhhhHhhhccc
Q 009563 390 TITAVLLD-----KLGRKPMTI-GTLWFSGFFCLLGSLVKNNG------IWK-IVRMICGVMGIFGVAGTYNLLFIYTTE 456 (532)
Q Consensus 390 ~~~~~l~d-----~~gr~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (532)
++...++| |+|||+..+ -+..+....++++....+.. .+. .......++..+..+.--...-.+...
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALt 160 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALT 160 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 45666677 899988654 45556666666665543221 111 011112233333332222233445555
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 457 LFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 457 ~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
+..++..|-+..........|.+++-.+.
T Consensus 161 mLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 161 MLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 56666666555544444555665554443
No 292
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=91.52 E-value=12 Score=34.98 Aligned_cols=96 Identities=18% Similarity=0.111 Sum_probs=66.2
Q ss_pred HHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccchhhhheeecccCC--Cch-
Q 009563 139 GCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGP--SKR- 215 (532)
Q Consensus 139 ~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~r- 215 (532)
..+.+.++.+.+..+ +|-|.++.++.......- ..-+-+.+..++-.-.+.|+|.+..+..--+|+++.... ++|
T Consensus 70 ~l~~s~m~~~~~Ir~-~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~ 147 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRF-LGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRG 147 (390)
T ss_pred HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhh
Confidence 344455555577787 999999998887765542 223447889999999999999999999988998876543 233
Q ss_pred ------------hHHHHHHHHHHHHHHHHHHHH
Q 009563 216 ------------GAAGMSTFYFFSTGIALLSGI 236 (532)
Q Consensus 216 ------------~~~~~~~~~~~~~G~~~~~~l 236 (532)
+....+++...-.|.++...+
T Consensus 148 ~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 148 EQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred hhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 233445555555565554443
No 293
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=90.09 E-value=0.54 Score=45.56 Aligned_cols=103 Identities=9% Similarity=-0.030 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHhh----hCCchhHH-HHHHHHHHHHHHHHhhhcc--------ch----h-HHHHHHHHHHHHHHHH
Q 009563 383 VAEMPAFTITAVLLDK----LGRKPMTI-GTLWFSGFFCLLGSLVKNN--------GI----W-KIVRMICGVMGIFGVA 444 (532)
Q Consensus 383 ~~~~~~~~~~~~l~d~----~gr~~~~~-~~~~~~~~~~~~~~~~~~~--------~~----~-~~~~~~~~~~~~~~~~ 444 (532)
+.+++...+.|..+|| +||||..+ .+.....++++++.+..+. .. . ....++...+.-+...
T Consensus 78 i~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n 157 (498)
T KOG0637|consen 78 LSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANN 157 (498)
T ss_pred cccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhh
Confidence 4456677788899996 67776654 5556666666666554221 11 1 1123333444445555
Q ss_pred hhhhhHhhhccccccchhhhh-HHHHHHHHHHHHHHHHHHHH
Q 009563 445 GTYNLLFIYTTELFPTVVRNA-ALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 445 ~~~~~~~~~~~~~~p~~~r~~-~~g~~~~~~~~g~~i~p~~~ 485 (532)
......-++..|+..++.+.+ +.+....+..+|+.+|=.+.
T Consensus 158 ~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 158 TLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred hhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecc
Confidence 667788899999987777777 88888888777776654333
No 294
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=89.87 E-value=2.8 Score=40.43 Aligned_cols=112 Identities=22% Similarity=0.221 Sum_probs=81.7
Q ss_pred hhHHHHHHHH-HHHHHHHHHHHHHhhccCCCCchHHHHHHHHH-HHHHHHH-H------hhcchHHHHHHHHHHHHhhcc
Q 009563 126 KYKVGLVQAL-FFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMM-NAVFGCL-T------AFSPNYSTYVVLRMLTGFSTG 196 (532)
Q Consensus 126 ~~~~~~~~s~-~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~-~~~~~~~-~------~~~~~~~~l~~~r~l~G~~~~ 196 (532)
+...-++..+ |.+.-.+|.+...++-++ +||...+...+= ..+-.+. | .+-++-+++++...+.|+..|
T Consensus 281 ~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnG 358 (406)
T KOG1479|consen 281 DWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNG 358 (406)
T ss_pred hhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccc
Confidence 4445555666 889999998888888775 555544443321 1222222 1 223577888999999999999
Q ss_pred ccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009563 197 GVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYI 239 (532)
Q Consensus 197 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~ 239 (532)
-.....+.+..+-.+++++..+..+.......|...|..++..
T Consensus 359 Yltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 359 YLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred hHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 9999999999999999999999888888888888888777543
No 295
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=89.62 E-value=9.2 Score=33.96 Aligned_cols=35 Identities=17% Similarity=0.017 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHH
Q 009563 383 VAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCL 417 (532)
Q Consensus 383 ~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~ 417 (532)
++..++.+-+-+++.|+.-|.+.+.+..+..++.+
T Consensus 251 lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~Fgl 285 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVRTVTLIGGILFIIFGL 285 (294)
T ss_pred HHHHHHHhhhHHHhhhheeEEEEEecchhHHHHHH
Confidence 33444444455678888888777666655555433
No 296
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.34 E-value=2.3 Score=31.77 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH
Q 009563 127 YKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVF 171 (532)
Q Consensus 127 ~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~ 171 (532)
.+.+.-.+.=+++..+.....||+.||++|.++..++..++.+.+
T Consensus 42 ~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 42 YAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 344555666778888888889999999778887766665554443
No 297
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=85.23 E-value=23 Score=33.40 Aligned_cols=83 Identities=13% Similarity=0.111 Sum_probs=57.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH----HHHH-hhc----chHHHHHHHHHHHHhhc
Q 009563 125 EKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVF----GCLT-AFS----PNYSTYVVLRMLTGFST 195 (532)
Q Consensus 125 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~----~~~~-~~~----~~~~~l~~~r~l~G~~~ 195 (532)
+--|.+.+.+.|..++.+|+...-++.|. --.-+.+..-.++..++ .++. .|+ ++-+.+++.-++.|.-.
T Consensus 41 ~Ilq~S~Iia~yl~amGlGs~~sry~~dd-~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LV 119 (508)
T COG4262 41 GILQTSLIIAGYLAAMGLGSLLSRYVLDD-AALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLV 119 (508)
T ss_pred ceeehHHHHHHHHHHhchhhhhhccccCc-hHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 44688999999999999999999998885 23332333222222222 1111 222 46778889999999999
Q ss_pred cccchhhhheeec
Q 009563 196 GGVGLCAFVLATE 208 (532)
Q Consensus 196 ~~~~~~~~~~i~~ 208 (532)
|.-.|..+.++..
T Consensus 120 G~EiPL~mrml~~ 132 (508)
T COG4262 120 GAEIPLLMRMLQR 132 (508)
T ss_pred hcchHHHHHHHHH
Confidence 9999998888766
No 298
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=84.46 E-value=0.33 Score=45.79 Aligned_cols=109 Identities=20% Similarity=0.268 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHH--HHHHHHHHHHHh----------hcchHHHHHHHHHHHHhhcccc
Q 009563 131 LVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVV--CMMNAVFGCLTA----------FSPNYSTYVVLRMLTGFSTGGV 198 (532)
Q Consensus 131 ~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~--~~~~~~~~~~~~----------~~~~~~~l~~~r~l~G~~~~~~ 198 (532)
.+...|.++-.+|..+.++.-=+.-.+|.....+ =+++.-..++|. +.+|-+..++..++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 3566788888888888776421100244433321 122222222221 2245567788899999999999
Q ss_pred chhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009563 199 GLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYI 239 (532)
Q Consensus 199 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~ 239 (532)
......+..+..++++|..+..+...+..+|..+|..++..
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888888888777544
No 299
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=82.42 E-value=7.8 Score=28.10 Aligned_cols=52 Identities=8% Similarity=-0.086 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccc
Q 009563 375 YLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNG 426 (532)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (532)
........++.++|.+...++.++.++++.+..+.++..+..+.+.+..+..
T Consensus 30 g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 30 GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 4445556678888988888888887778888899999999888888876553
No 300
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=81.63 E-value=6.9 Score=35.33 Aligned_cols=119 Identities=23% Similarity=0.208 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhh-ccccc----
Q 009563 384 AEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIY-TTELF---- 458 (532)
Q Consensus 384 ~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---- 458 (532)
..++...+.|-+.||.|||+.-+.-.+...++++. ...+.+. +.++.-++.|+.....++..-++ +.|..
T Consensus 84 SsmLFGtivgSLaDkqGRKracvtycitYiLsCiT----KhSpqYk-VLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~ 158 (454)
T KOG4332|consen 84 SSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT----KHSPQYK-VLMVGRVLGGIATSLLFSAFESWLIAEHNEKRG 158 (454)
T ss_pred hHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh----hcCCceE-EEeehhhhhhHHHHHHHHHHHHHHHHHhhhccC
Confidence 34455667788999999998765444444443332 2222222 45666677777777766654433 34443
Q ss_pred -cchhhhhHHHHHHHH-----HHHHHHHHHHHH---HhhhhhHHHHHHHHHHHHHHHH
Q 009563 459 -PTVVRNAALGCATQA-----AQLGAILAPFVV---VLGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 459 -p~~~r~~~~g~~~~~-----~~~g~~i~p~~~---~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
|++-....++=...+ ..+.+..+..+. ..|+-.+|-..++...++..+.
T Consensus 159 FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvi 216 (454)
T KOG4332|consen 159 FEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVI 216 (454)
T ss_pred ChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHH
Confidence 333323222222211 122333344444 4566777776666655554443
No 301
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=80.98 E-value=63 Score=32.28 Aligned_cols=102 Identities=17% Similarity=0.060 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhc-------------------cc-h--hH------HHHHHH
Q 009563 384 AEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKN-------------------NG-I--WK------IVRMIC 435 (532)
Q Consensus 384 ~~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~-------------------~~-~--~~------~~~~~~ 435 (532)
++++..++-.++.+++.+.++..........+.+++++.-. .+ . |. |...+.
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 34566777888888888888876655555555555554311 00 0 00 122222
Q ss_pred HHHHHHHHHhhhh-hHhhhccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 009563 436 GVMGIFGVAGTYN-LLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVV 485 (532)
Q Consensus 436 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~ 485 (532)
.++.-.......+ +.+..++|....++..+-.++.+...+++..++..+.
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~ 204 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVT 204 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 2233233333344 6788999999999999999999999998887776655
No 302
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=78.72 E-value=45 Score=30.19 Aligned_cols=104 Identities=15% Similarity=0.239 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHH----HHHHHHHHHHHHHhh-cc----hHHHHHHHHHHHHhhcccc
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLT----VVCMMNAVFGCLTAF-SP----NYSTYVVLRMLTGFSTGGV 198 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~----~~~~~~~~~~~~~~~-~~----~~~~l~~~r~l~G~~~~~~ 198 (532)
......-++..|..+|.+..|++....+-||+.+. .+.+++.++.+.... .. ++..+++.-|+.|+..=+.
T Consensus 142 ~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~Wgi 221 (267)
T PF07672_consen 142 IIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGI 221 (267)
T ss_pred hhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 44555667777888888888888775467777665 345555555544312 21 3566778888888765444
Q ss_pred chhhhheeecccCCCchhHHHHHHHHHHHHHHHH
Q 009563 199 GLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIAL 232 (532)
Q Consensus 199 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 232 (532)
.++.. .+..-++..++.+..-.++..+++|.++
T Consensus 222 Q~ViL-~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 222 QGVIL-NLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred hHHHh-cChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 44333 3333333333333334445556666544
No 303
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=73.23 E-value=64 Score=28.25 Aligned_cols=17 Identities=24% Similarity=0.378 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHhh
Q 009563 134 ALFFFGCMIGAGVFGHL 150 (532)
Q Consensus 134 s~~~l~~~~~~~~~g~l 150 (532)
....+++.+|..+.+.+
T Consensus 53 ~~~i~~F~~G~~~~~~i 69 (209)
T PF06912_consen 53 LLAILSFILGAFLAGLI 69 (209)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44445555666666666
No 304
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=67.39 E-value=65 Score=33.39 Aligned_cols=124 Identities=18% Similarity=0.062 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHhh-hCCchhHHHHHHHHHHHHHHHHhhhcc------------------c-h--hHHHHHHHHHHHHH
Q 009563 384 AEMPAFTITAVLLDK-LGRKPMTIGTLWFSGFFCLLGSLVKNN------------------G-I--WKIVRMICGVMGIF 441 (532)
Q Consensus 384 ~~~~~~~~~~~l~d~-~gr~~~~~~~~~~~~~~~~~~~~~~~~------------------~-~--~~~~~~~~~~~~~~ 441 (532)
......+++++++|- +||-+++.++.++..+++.++.+.... . . ....++..+.+..+
T Consensus 85 ~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~ 164 (571)
T KOG1237|consen 85 TQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIAL 164 (571)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHhee
Confidence 344566788999997 588888888888877776555543110 0 0 11133344444555
Q ss_pred HHHhhhhhHhhhccccccchh----hh--hHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHH
Q 009563 442 GVAGTYNLLFIYTTELFPTVV----RN--AALGCATQAAQLGAILAPFVV-----VLGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 442 ~~~~~~~~~~~~~~~~~p~~~----r~--~~~g~~~~~~~~g~~i~p~~~-----~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
|.++.-+...++-.|-++... +. .-+.......++|..++-.+. ..++...|.+..++..++.++.
T Consensus 165 G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 165 GAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred ccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 677777888888888887222 22 444555555566666654444 2345555555555555554443
No 305
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=64.87 E-value=18 Score=23.63 Aligned_cols=38 Identities=11% Similarity=0.143 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH
Q 009563 134 ALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVF 171 (532)
Q Consensus 134 s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~ 171 (532)
.....+..+.....|+..|+++|.++...+..++.++.
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 34455566677788888887788866665555544443
No 306
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=64.78 E-value=23 Score=33.59 Aligned_cols=116 Identities=14% Similarity=0.043 Sum_probs=65.9
Q ss_pred HHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccchhhhhHHHHHHHH
Q 009563 394 VLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQA 473 (532)
Q Consensus 394 ~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 473 (532)
.+.|...-|++++.-.+.......++.+..+... .-+.-+++|... ..--..++++-+..+++++.++.|.+...
T Consensus 64 lLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~----mQvlE~FyG~~t-AaEIAYysYIYs~Vd~~~Yqrvt~y~RaA 138 (433)
T KOG3810|consen 64 LLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKA----MQVLEFFYGPAT-AAEIAYYSYIYSKVDPEMYKRVTGYCRAA 138 (433)
T ss_pred HHhhhhhcceeeeeeccchhHHHHHHHhcCCchh----eeeehhhcChHH-HHHHhhhheeeeecCHHHHHHHHHHhHHH
Confidence 4567777777766655555555555555444332 223333333322 22335567788888999999999998887
Q ss_pred HHHHHHHHHHHH----H---hhhhhHHHHHHHHHHHHHHHHhhccCCC
Q 009563 474 AQLGAILAPFVV----V---LGGWLPFAVFAACGIIGGLFAFYLPETL 514 (532)
Q Consensus 474 ~~~g~~i~p~~~----~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 514 (532)
.-.|...|..+. . ..+...-.+......++.++.+++|..+
T Consensus 139 ~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 139 FLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 666655554444 2 2233333333344445555667777655
No 307
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=61.58 E-value=1.8e+02 Score=31.13 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=60.0
Q ss_pred HHhhccC---CCCchHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHH
Q 009563 147 FGHLSDS---RLGRKGSLTVVCMMNAVFGCLTAFSP-NYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMST 222 (532)
Q Consensus 147 ~g~l~dr---~~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 222 (532)
.+-++|. +-||.+-++++.++++++++...+.. ..+.+..+-++.+++.++.... .+|....+..
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlga~-----------G~Rya~Iaf~ 111 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLGAV-----------GQRYATIAFG 111 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHh-----------hhhHHHHHHH
Confidence 3555563 23777888889999998888877654 4555666666666655443321 2333333333
Q ss_pred HHHHHHHHHHHHHHHHHhhchHH--HHHHHHHHHHHHHHHHhcccccCch
Q 009563 223 FYFFSTGIALLSGIAYIFQTWRA--LYIASSIPSILFLLIILPFLPESPR 270 (532)
Q Consensus 223 ~~~~~~G~~~~~~l~~~l~~wr~--~f~~~~~~~~~~~~~~~~~~~esp~ 270 (532)
.....+-.++++...+. .|.. .+...++...+..++.+.+.|.-|.
T Consensus 112 tLliaiytmlg~~~~~~--w~~~pllll~GalwY~llsl~~~~l~p~rp~ 159 (704)
T TIGR01666 112 SLLVALYTMLGYIEVNV--WFIQPVMLLCGTLWYSVVTLIVHLFFPNRPV 159 (704)
T ss_pred HHHHHHHHHhcccccch--HHHHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 33333333333221110 1322 2345556666666566677777663
No 308
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=60.82 E-value=29 Score=26.07 Aligned_cols=34 Identities=15% Similarity=-0.033 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH
Q 009563 138 FGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVF 171 (532)
Q Consensus 138 l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~ 171 (532)
+...+...+.|...|++||-++.+.+..++.+++
T Consensus 53 v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 3444556666777787688877555554444443
No 309
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.81 E-value=35 Score=25.77 Aligned_cols=30 Identities=27% Similarity=0.342 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhhh-CCchhHHHHHHHHHH
Q 009563 385 EMPAFTITAVLLDKL-GRKPMTIGTLWFSGF 414 (532)
Q Consensus 385 ~~~~~~~~~~l~d~~-gr~~~~~~~~~~~~~ 414 (532)
+++.....||+.||+ +.++.-++.+++...
T Consensus 55 GilVGa~iG~llD~~agTsPwglIv~lllGf 85 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLIVFLLLGF 85 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 344445677888885 555444444443333
No 310
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=60.52 E-value=1.2e+02 Score=28.13 Aligned_cols=96 Identities=17% Similarity=0.157 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009563 162 TVVCMMNAVFGCLTAFS-PNYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF 240 (532)
Q Consensus 162 ~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l 240 (532)
+.+.+++++++++..+. ++.+.+.+.-++.+++.++.... ..|+...|.......+=.+.++.-+.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml~~~-----------G~r~~~i~~~~Ll~~v~t~~~~~~~~-- 69 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGMLGVY-----------GPRAATIGFATLLVAVYTMAGPSPGP-- 69 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH-----------hhHHHHHHHHHHHHHHHHHhCCCcch--
Confidence 44555555555555544 45555666666666655543321 23443333333222222222222111
Q ss_pred hchH--HHHHHHHHHHHHHHHHHhcccccCch
Q 009563 241 QTWR--ALYIASSIPSILFLLIILPFLPESPR 270 (532)
Q Consensus 241 ~~wr--~~f~~~~~~~~~~~~~~~~~~~esp~ 270 (532)
..|. ..+.+.+++..+..++.+.+.|..|.
T Consensus 70 ~~~~~~~l~~~Gglwy~~lsl~~~~l~p~r~~ 101 (284)
T PF12805_consen 70 EALEHALLFLAGGLWYLLLSLLWWPLRPYRPV 101 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 0122 23455566666666566667776553
No 311
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=57.62 E-value=1.9e+02 Score=30.90 Aligned_cols=112 Identities=20% Similarity=0.144 Sum_probs=60.0
Q ss_pred HHHHhhccC---CCCchHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHH
Q 009563 145 GVFGHLSDS---RLGRKGSLTVVCMMNAVFGCLTAFSP-NYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGM 220 (532)
Q Consensus 145 ~~~g~l~dr---~~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 220 (532)
.+.+-+.|. +-||.+-++++.++++++++...+.. ..+.+..+-++.+++.++.... .+|....+
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga~-----------G~r~~~I~ 109 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGAL-----------GQRYATIA 109 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHh-----------hhhHHhHH
Confidence 344455664 23677889999999999988888664 4455666666666655543332 22333223
Q ss_pred HHHHHHHHHHHHHHHHHHHhhch--HH-HHHHHHHHHHHHHHHHhcccccCch
Q 009563 221 STFYFFSTGIALLSGIAYIFQTW--RA-LYIASSIPSILFLLIILPFLPESPR 270 (532)
Q Consensus 221 ~~~~~~~~G~~~~~~l~~~l~~w--r~-~f~~~~~~~~~~~~~~~~~~~esp~ 270 (532)
.......+-.++++...+ .| +. .+...++...+..++.+.+.|+-|.
T Consensus 110 f~~L~~aiytml~~~~~~---~w~~~pllll~GalwY~l~sll~~~l~p~rp~ 159 (701)
T TIGR01667 110 FASLLAAIYTMLGAGEVP---VWFIEPLLILAGTLWYGLLTLIWFLLFPNQPL 159 (701)
T ss_pred HHHHHHHHHHHcCccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 322222222233322111 23 22 3344556666666566667777653
No 312
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=56.78 E-value=2e+02 Score=28.03 Aligned_cols=18 Identities=28% Similarity=0.268 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 009563 224 YFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 224 ~~~~~G~~~~~~l~~~l~ 241 (532)
...+.|.+--|++.....
T Consensus 102 ~~~N~~~lglpi~~~l~g 119 (385)
T PF03547_consen 102 SFGNTGFLGLPILQALFG 119 (385)
T ss_pred cCCcchhhHHHHHHHHhc
Confidence 344555544454444443
No 313
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=55.87 E-value=66 Score=26.40 Aligned_cols=36 Identities=11% Similarity=0.168 Sum_probs=26.5
Q ss_pred hhhhhHhhhccccccchhhhhHHHHHHHHHHHHHHH
Q 009563 445 GTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAIL 480 (532)
Q Consensus 445 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~i 480 (532)
+...+.+.+++..-.++..|+..|+-.+-.+++.+.
T Consensus 110 gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 110 GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 334566777777777787899999988887776554
No 314
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=52.26 E-value=3.4e+02 Score=29.40 Aligned_cols=23 Identities=9% Similarity=-0.207 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhccC
Q 009563 131 LVQALFFFGCMIGAGVFGHLSDS 153 (532)
Q Consensus 131 ~~~s~~~l~~~~~~~~~g~l~dr 153 (532)
+...+......+..++..++.+|
T Consensus 13 l~~~~lG~~lll~~l~s~~lkeR 35 (810)
T TIGR00844 13 VAYSCVGIFSSIFSLVSLFVKEK 35 (810)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Confidence 33334444445556666677665
No 315
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=51.47 E-value=1.6e+02 Score=29.75 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHH
Q 009563 183 TYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGI 230 (532)
Q Consensus 183 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 230 (532)
.+++.-++.-+..-..+++..++-+.+..|.--|+.|.+.+...++|.
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGG 454 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGG 454 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCC
Confidence 344556666677777788888888999999999999999999988886
No 316
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=50.66 E-value=2.3e+02 Score=27.04 Aligned_cols=14 Identities=21% Similarity=0.249 Sum_probs=6.0
Q ss_pred HHHHHHHHHhhhCC
Q 009563 388 AFTITAVLLDKLGR 401 (532)
Q Consensus 388 ~~~~~~~l~d~~gr 401 (532)
...+--++.++.++
T Consensus 183 ~nV~~E~~v~~~~~ 196 (334)
T PF06027_consen 183 SNVLEEKLVKKAPR 196 (334)
T ss_pred HHHHHHHhcccCCH
Confidence 33444444444443
No 317
>PRK10263 DNA translocase FtsK; Provisional
Probab=45.16 E-value=5.4e+02 Score=29.75 Aligned_cols=19 Identities=21% Similarity=0.303 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHhhhCC
Q 009563 383 VAEMPAFTITAVLLDKLGR 401 (532)
Q Consensus 383 ~~~~~~~~~~~~l~d~~gr 401 (532)
.++.+|.++...+..-+|.
T Consensus 63 l~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 63 LGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred ccchHHHHHHHHHHHHHhH
Confidence 4455566666655555553
No 318
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=43.19 E-value=1.3e+02 Score=21.95 Aligned_cols=39 Identities=10% Similarity=0.119 Sum_probs=26.9
Q ss_pred HHHHHHHHhhccCCCCc-------hHHHHHHHHHHHHHHHHHhhcch
Q 009563 141 MIGAGVFGHLSDSRLGR-------KGSLTVVCMMNAVFGCLTAFSPN 180 (532)
Q Consensus 141 ~~~~~~~g~l~dr~~Gr-------r~~l~~~~~~~~~~~~~~~~~~~ 180 (532)
..+.+..+++.+| .-+ ++.+.++.++...+.++++..+|
T Consensus 32 ta~~p~~~~~~~~-~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 32 TAASPPLGYYMER-SAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHhc-ccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555555555 333 78888888888888888887665
No 319
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=40.38 E-value=3.4e+02 Score=25.95 Aligned_cols=70 Identities=10% Similarity=0.196 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHH---HHHHHHhhcchHHHHHHHHHHHHhhcccc
Q 009563 127 YKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNA---VFGCLTAFSPNYSTYVVLRMLTGFSTGGV 198 (532)
Q Consensus 127 ~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 198 (532)
...|.+..+..++..+ .++.+++.+. +|.-+.+..++++.. --.+...+++|......+-.+.|.-.|..
T Consensus 47 ~m~GI~~laP~la~~l-~~vi~Pl~~~-~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~T 119 (354)
T PF04346_consen 47 SMAGIMALAPVLAAFL-SPVIGPLFQA-IGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGAT 119 (354)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHH-hCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhccc
Confidence 4566666666666555 4455677787 899999988777632 23455566777776666666666544443
No 320
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=38.78 E-value=2.2e+02 Score=27.03 Aligned_cols=68 Identities=12% Similarity=0.051 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcccc
Q 009563 385 EMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTEL 457 (532)
Q Consensus 385 ~~~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (532)
-+..+++.+.+++++|-|+++.++........ ..+..+.+.-.+......|++.+..+..--+|+.+.
T Consensus 71 l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-----A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 71 LIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-----AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPM 138 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-----HhhcchhHHhhccHHHhhccccccccccCcceecHH
Confidence 34455666689999999998877655444322 222222222345556667777777766555555554
No 321
>COG4769 Predicted membrane protein [Function unknown]
Probab=38.76 E-value=31 Score=28.33 Aligned_cols=52 Identities=21% Similarity=0.188 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHh
Q 009563 135 LFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTGF 193 (532)
Q Consensus 135 ~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 193 (532)
++.+..++.+.+.-++..+ +|+|..-++|... ..++.+|..++++.+++.|-
T Consensus 81 l~sfaG~i~S~L~m~~l~~-f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQ-FGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhc
Confidence 3445555666666677777 8988875555433 34567999999999999864
No 322
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=37.17 E-value=1.8e+02 Score=21.77 Aligned_cols=43 Identities=16% Similarity=0.200 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 009563 464 NAALGCATQAAQLGAILAPFVVVLGGWLPFAVFAACGIIGGLFA 507 (532)
Q Consensus 464 ~~~~g~~~~~~~~g~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
|-..++....-.+|++..-. ....+--+|.+.+++.+.+....
T Consensus 28 GfslS~L~~slgv~Q~~~kv-ialQWIFAFvI~avlfv~sl~va 70 (97)
T PF08611_consen 28 GFSLSYLTASLGVGQFFIKV-IALQWIFAFVIAAVLFVLSLVVA 70 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333344443222 23445556667776666655443
No 323
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=35.59 E-value=62 Score=29.31 Aligned_cols=78 Identities=13% Similarity=-0.124 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhcccccc--chhhhhHHHHHHHHHHHHHHHHHH
Q 009563 406 IGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFP--TVVRNAALGCATQAAQLGAILAPF 483 (532)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~r~~~~g~~~~~~~~g~~i~p~ 483 (532)
..+.++-..+...+.+.+..... ..+...++.|+..........++...+.. .+.++...|-..++-.+...++-.
T Consensus 272 saGgiiwifcga~ilLlpr~i~s--ymyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~GiA~~ 349 (412)
T KOG4830|consen 272 SAGGIIWIFCGAVILLLPRGIKS--YMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSNGIAYQ 349 (412)
T ss_pred ecccHHHHHhhhheeecccchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhcccHHHH
Confidence 34444444444444444433332 34555556666665554444444444433 334455566666665555444433
Q ss_pred HH
Q 009563 484 VV 485 (532)
Q Consensus 484 ~~ 485 (532)
+.
T Consensus 350 li 351 (412)
T KOG4830|consen 350 LI 351 (412)
T ss_pred HH
Confidence 33
No 324
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=34.41 E-value=3e+02 Score=23.57 Aligned_cols=59 Identities=7% Similarity=-0.061 Sum_probs=30.2
Q ss_pred ccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHH
Q 009563 197 GVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQT-WRALYIASSIPSI 255 (532)
Q Consensus 197 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~-wr~~f~~~~~~~~ 255 (532)
.-.....+.+.+..|+++|.++.-+-..+..+--.+.-.++.++.. |.|..++.|+..+
T Consensus 12 ~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~~~~i~~igG~~Ll 71 (183)
T PF03741_consen 12 IDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSIFPWILLIGGLFLL 71 (183)
T ss_pred hhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666677888887776544333333333333333444433 3565555554433
No 325
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=34.27 E-value=1.1e+02 Score=25.25 Aligned_cols=50 Identities=10% Similarity=0.064 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHH
Q 009563 180 NYSTYVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIAL 232 (532)
Q Consensus 180 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 232 (532)
.+..++..-.+.|+|.- .+.+.+++--+.+++-|..+|+-.+-.+++.+.
T Consensus 96 ~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 34444444444444432 234555666667777898888888877776654
No 326
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=34.23 E-value=2e+02 Score=21.65 Aligned_cols=27 Identities=7% Similarity=-0.120 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHH
Q 009563 385 EMPAFTITAVLLDKLGRKPMTIGTLWF 411 (532)
Q Consensus 385 ~~~~~~~~~~l~d~~gr~~~~~~~~~~ 411 (532)
.++|.+++-||-++++-.+...+.+++
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl~~ll 82 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTLTMLI 82 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 344444544555557665544333333
No 327
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=33.95 E-value=4.3e+02 Score=25.65 Aligned_cols=18 Identities=17% Similarity=0.364 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHhhhC
Q 009563 383 VAEMPAFTITAVLLDKLG 400 (532)
Q Consensus 383 ~~~~~~~~~~~~l~d~~g 400 (532)
+..++..++.|++..|.+
T Consensus 6 i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 334455556667776653
No 328
>PRK10263 DNA translocase FtsK; Provisional
Probab=33.07 E-value=3.5e+02 Score=31.15 Aligned_cols=7 Identities=14% Similarity=0.083 Sum_probs=2.9
Q ss_pred eeecccc
Q 009563 115 TVTQWGL 121 (532)
Q Consensus 115 i~~~~~~ 121 (532)
+.+-.|.
T Consensus 60 V~Nl~Gi 66 (1355)
T PRK10263 60 IHNLGGM 66 (1355)
T ss_pred cccccch
Confidence 3444443
No 329
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=32.31 E-value=2.6e+02 Score=26.03 Aligned_cols=57 Identities=16% Similarity=0.113 Sum_probs=35.6
Q ss_pred HHHHHHHHHhhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 184 YVVLRMLTGFSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 184 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
.-..|.+.|+-.- .+...++++.-.+|++++--..--...+.+++.++.+++|-.+.
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777776543 34456778888888665544444445556666666777776665
No 330
>PF07556 DUF1538: Protein of unknown function (DUF1538); InterPro: IPR011435 This family of protenis of unknown function contains several conserved glycines and phenylalanines.
Probab=31.45 E-value=3.6e+02 Score=23.68 Aligned_cols=86 Identities=16% Similarity=0.118 Sum_probs=50.7
Q ss_pred chHHHHHHHHHHHHhhccccchhhhheeecc--cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 009563 179 PNYSTYVVLRMLTGFSTGGVGLCAFVLATEP--VGPSKRGAAGMSTFYFFSTGIALLSGIAYIFQTWRALYIASSIPSIL 256 (532)
Q Consensus 179 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~--~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~wr~~f~~~~~~~~~ 256 (532)
.+.+.++..-++.|+......|....+..+. .....-.+..-....+.++|..++-.+.-.+.+|+..+++.....++
T Consensus 60 ~~~~~l~~~gf~lGf~~t~AEPal~vL~~qve~vs~G~i~~~~l~~~vaiGVg~~i~lg~lRIi~g~~l~~~l~~~Y~l~ 139 (212)
T PF07556_consen 60 GSLWLLLLFGFVLGFLVTIAEPALRVLADQVEEVSGGSIPKSVLILAVAIGVGIFIALGMLRIIFGIPLWYFLIPGYILV 139 (212)
T ss_pred CCcEEeHHHHHHHHHHHHhhCcHHHHHHHHHHHhCcCCcchhHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 4677888889999999999999887665432 22223334444455555555555555545555777665554444433
Q ss_pred HHHHHhcccc
Q 009563 257 FLLIILPFLP 266 (532)
Q Consensus 257 ~~~~~~~~~~ 266 (532)
. +..++.|
T Consensus 140 ~--~l~~f~p 147 (212)
T PF07556_consen 140 L--ILTFFSP 147 (212)
T ss_pred H--HHHHhcC
Confidence 2 3334444
No 331
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=31.16 E-value=5.4e+02 Score=25.60 Aligned_cols=77 Identities=16% Similarity=0.203 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhhhCCchh-----HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccc
Q 009563 386 MPAFTITAVLLDKLGRKPM-----TIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPT 460 (532)
Q Consensus 386 ~~~~~~~~~l~d~~gr~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 460 (532)
+.-++++-++.+.+.++++ +++|+.+....++++.+..+.... ..+... ...+..+...|+......
T Consensus 305 I~LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEhi~F~--~AYliA------a~a~i~Li~~Y~~~vl~~ 376 (430)
T PF06123_consen 305 IGLTFLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEHIGFN--LAYLIA------ALACIGLISLYLSSVLKS 376 (430)
T ss_pred HHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhhchH--HHHHHH------HHHHHHHHHHHHHHHHhc
Confidence 3344555566666666544 345555555555555554443322 111111 122223344555555555
Q ss_pred hhhhhHHHHH
Q 009563 461 VVRNAALGCA 470 (532)
Q Consensus 461 ~~r~~~~g~~ 470 (532)
..++..++..
T Consensus 377 ~k~~~~~~~~ 386 (430)
T PF06123_consen 377 WKRGLIFAGL 386 (430)
T ss_pred chHHHHHHHH
Confidence 5555554433
No 332
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=30.27 E-value=64 Score=24.58 Aligned_cols=28 Identities=18% Similarity=0.437 Sum_probs=22.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhcccccCc
Q 009563 242 TWRALYIASSIPSILFLLIILPFLPESP 269 (532)
Q Consensus 242 ~wr~~f~~~~~~~~~~~~~~~~~~~esp 269 (532)
+|+.+|++...++++++.+.+.+.||+.
T Consensus 58 ~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 58 GWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 8999999888777777767777888864
No 333
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=30.26 E-value=1.2e+02 Score=23.00 Aligned_cols=52 Identities=17% Similarity=0.113 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc
Q 009563 127 YKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP 179 (532)
Q Consensus 127 ~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~ 179 (532)
...|=..++|.--+++.++++++..|+ .-+.+.=.+|..+..++..+..+.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg-~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDG-VRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcC-cCCChHHHHhHHHHHHhHHheEecC
Confidence 446677788888899999999999998 7888888888887777776655443
No 334
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=30.03 E-value=1e+02 Score=17.23 Aligned_cols=11 Identities=9% Similarity=0.317 Sum_probs=7.9
Q ss_pred HHhcccccCch
Q 009563 260 IILPFLPESPR 270 (532)
Q Consensus 260 ~~~~~~~esp~ 270 (532)
....+++|+|+
T Consensus 18 FFAIfFRepPr 28 (31)
T PRK11875 18 FFAIAFRDPPK 28 (31)
T ss_pred HHhhhccCCCC
Confidence 55567788886
No 335
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=29.97 E-value=5.3e+02 Score=26.51 Aligned_cols=24 Identities=21% Similarity=0.318 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCC
Q 009563 378 VLVNAVAEMPAFTITAVLLDKLGR 401 (532)
Q Consensus 378 ~~~~~~~~~~~~~~~~~l~d~~gr 401 (532)
.....+.+.++...++++...++.
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCC
Confidence 344455566677777777776654
No 336
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=29.54 E-value=3.9e+02 Score=23.39 Aligned_cols=25 Identities=16% Similarity=0.081 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 374 LYLNVLVNAVAEMPAFTITAVLLDK 398 (532)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~d~ 398 (532)
........++.+++....+-++-+|
T Consensus 156 ~~~~~~~igivs~i~~~~G~~lG~~ 180 (206)
T TIGR02840 156 PLATSILVAVMSFIFVSLGLFLGKK 180 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444444444333334333
No 337
>PRK11715 inner membrane protein; Provisional
Probab=29.30 E-value=3.6e+02 Score=26.88 Aligned_cols=45 Identities=7% Similarity=0.077 Sum_probs=21.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 009563 214 KRGAAGMSTFYFFSTGIALLSGIAYIFQTWRALYIASSIPSILFL 258 (532)
Q Consensus 214 ~r~~~~~~~~~~~~~G~~~~~~l~~~l~~wr~~f~~~~~~~~~~~ 258 (532)
+-+...++...+...-..++..+...+.+||....+.+.+..+-.
T Consensus 354 HigF~~AYliAa~a~v~li~~Y~~~vl~~~k~g~~~~~~L~~LYg 398 (436)
T PRK11715 354 HIGFTLAYLIAALACVLLIGFYLSAVLRSWKRGLLFAAALAALYG 398 (436)
T ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 344444444444444444444444444456655555555544444
No 338
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=28.52 E-value=1.1e+02 Score=16.89 Aligned_cols=11 Identities=36% Similarity=0.685 Sum_probs=4.5
Q ss_pred HHhcccccCch
Q 009563 260 IILPFLPESPR 270 (532)
Q Consensus 260 ~~~~~~~esp~ 270 (532)
....+++|+|+
T Consensus 18 ffAI~FRePPr 28 (29)
T PF01405_consen 18 FFAIFFREPPR 28 (29)
T ss_dssp HHHHHSS----
T ss_pred HhhhhccCCCC
Confidence 55567788875
No 339
>PRK02237 hypothetical protein; Provisional
Probab=27.30 E-value=1.9e+02 Score=22.02 Aligned_cols=51 Identities=14% Similarity=0.037 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcc
Q 009563 128 KVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSP 179 (532)
Q Consensus 128 ~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~ 179 (532)
..|=+.++|.-.+++.++++++..|+ .-+-+.=.+|..+..++..+..+.+
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg-~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDG-VRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcC-cCCChhHHHhHHHHHHhHHHheecC
Confidence 46777888888999999999999998 7887777788777777766554443
No 340
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=27.00 E-value=4.5e+02 Score=26.16 Aligned_cols=26 Identities=15% Similarity=0.047 Sum_probs=15.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHhhcch
Q 009563 155 LGRKGSLTVVCMMNAVFGCLTAFSPN 180 (532)
Q Consensus 155 ~Grr~~l~~~~~~~~~~~~~~~~~~~ 180 (532)
+.+-..+++|+.+...-.++.+++..
T Consensus 323 iHpiQY~LVGlAl~lFYlLLLSlSEh 348 (430)
T PF06123_consen 323 IHPIQYLLVGLALVLFYLLLLSLSEH 348 (430)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444566666666666666666653
No 341
>CHL00031 psbT photosystem II protein T
Probab=26.98 E-value=1.1e+02 Score=17.43 Aligned_cols=11 Identities=27% Similarity=0.625 Sum_probs=8.1
Q ss_pred HHhcccccCch
Q 009563 260 IILPFLPESPR 270 (532)
Q Consensus 260 ~~~~~~~esp~ 270 (532)
....+++|+|+
T Consensus 18 FFAI~FRePPr 28 (33)
T CHL00031 18 FFAIFFREPPK 28 (33)
T ss_pred HHhheecCCCC
Confidence 55667889886
No 342
>PRK02935 hypothetical protein; Provisional
Probab=26.57 E-value=2.9e+02 Score=20.94 Aligned_cols=12 Identities=17% Similarity=0.102 Sum_probs=5.0
Q ss_pred hhCCchhHHHHH
Q 009563 398 KLGRKPMTIGTL 409 (532)
Q Consensus 398 ~~gr~~~~~~~~ 409 (532)
|++|-|......
T Consensus 8 KINkiRt~aL~l 19 (110)
T PRK02935 8 KINKIRTFALSL 19 (110)
T ss_pred HHHHHHHHHHHH
Confidence 444444443333
No 343
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=25.65 E-value=3.1e+02 Score=20.95 Aligned_cols=22 Identities=9% Similarity=0.095 Sum_probs=9.7
Q ss_pred hhhCCchhHHHHHHHHHHHHHHHH
Q 009563 397 DKLGRKPMTIGTLWFSGFFCLLGS 420 (532)
Q Consensus 397 d~~gr~~~~~~~~~~~~~~~~~~~ 420 (532)
+|..+|+.. +..+..++.+++.
T Consensus 84 er~~~~~~~--a~~l~~~Gv~li~ 105 (113)
T PF13536_consen 84 ERLSPRRWL--AILLILIGVILIA 105 (113)
T ss_pred CCCCHHHHH--HHHHHHHHHHHHh
Confidence 345555444 3344444444433
No 344
>COG1288 Predicted membrane protein [Function unknown]
Probab=25.63 E-value=6.7e+02 Score=24.91 Aligned_cols=17 Identities=6% Similarity=-0.103 Sum_probs=12.4
Q ss_pred chHHHHHHHHHHHHHHH
Q 009563 242 TWRALYIASSIPSILFL 258 (532)
Q Consensus 242 ~wr~~f~~~~~~~~~~~ 258 (532)
+||...|+......+..
T Consensus 217 ~~Riv~~v~~~~~~i~y 233 (481)
T COG1288 217 GLRIVVWVVFTLISIIY 233 (481)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 89999888776655543
No 345
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=25.46 E-value=1.5e+02 Score=28.66 Aligned_cols=11 Identities=9% Similarity=0.081 Sum_probs=4.7
Q ss_pred chhhhheeecc
Q 009563 199 GLCAFVLATEP 209 (532)
Q Consensus 199 ~~~~~~~i~~~ 209 (532)
.+..+.++.|.
T Consensus 252 l~ii~~i~~E~ 262 (374)
T PF01528_consen 252 LSIIYLIVIEV 262 (374)
T ss_pred HHHHHHHHHHH
Confidence 33344444443
No 346
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=25.44 E-value=2.1e+02 Score=24.50 Aligned_cols=24 Identities=21% Similarity=0.474 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCc
Q 009563 133 QALFFFGCMIGAGVFGHLSDSRLGR 157 (532)
Q Consensus 133 ~s~~~l~~~~~~~~~g~l~dr~~Gr 157 (532)
+.-|.+++.+++.+.|++.|| .-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k-~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEK-IRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHh-hhc
Confidence 456888999999999999998 554
No 347
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=25.14 E-value=5.7e+02 Score=23.88 Aligned_cols=34 Identities=24% Similarity=0.231 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHHhhccccchhh-hheeecccCCC
Q 009563 180 NYSTYVVLRMLTGFSTGGVGLCA-FVLATEPVGPS 213 (532)
Q Consensus 180 ~~~~l~~~r~l~G~~~~~~~~~~-~~~i~~~~~~~ 213 (532)
+...-.+--.+.+++.|...-++ .-++.|....+
T Consensus 259 ~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~ 293 (317)
T PF02535_consen 259 SSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNK 293 (317)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33444455566666665544332 23444444333
No 348
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=24.94 E-value=2.4e+02 Score=20.29 Aligned_cols=43 Identities=12% Similarity=0.138 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHHHh
Q 009563 220 MSTFYFFSTGIALLSGIAYIFQ-----TWRALYIASSIPSILFLLIIL 262 (532)
Q Consensus 220 ~~~~~~~~~G~~~~~~l~~~l~-----~wr~~f~~~~~~~~~~~~~~~ 262 (532)
.+......+...+++.++..+. ||...||+.+--+++..+++.
T Consensus 16 ~lL~iW~vvsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fviLi 63 (81)
T PF13937_consen 16 ILLAIWFVVSFGVGILFADELNQITFGGFPLGFWFAAQGSIIVFVILI 63 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHHHHH
Confidence 3333333344444455555553 999999988766666554443
No 349
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=24.76 E-value=6e+02 Score=25.63 Aligned_cols=14 Identities=21% Similarity=0.320 Sum_probs=7.7
Q ss_pred HHHHhhhCCchhHH
Q 009563 393 AVLLDKLGRKPMTI 406 (532)
Q Consensus 393 ~~l~d~~gr~~~~~ 406 (532)
..+.+|+++|+...
T Consensus 105 ~~l~k~l~~~~~~~ 118 (465)
T PF03606_consen 105 NLLIKPLKGKKNPL 118 (465)
T ss_pred HHHHHHhcCCcchh
Confidence 35567776554433
No 350
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=24.32 E-value=2.8e+02 Score=22.39 Aligned_cols=52 Identities=19% Similarity=0.244 Sum_probs=29.9
Q ss_pred hccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh
Q 009563 453 YTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGGWLPFAVFAACGIIGGLFAF 508 (532)
Q Consensus 453 ~~~~~~p~~~r~~~~g~~~~~~~~g~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (532)
-+.|++|+..|..+.+..+.......-. ..++....|++..-..++++.+.+
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~~----~~~~g~a~Wi~tTSallLgvPl~l 110 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKSL----FSFSGKALWIVTTSALLLGVPLAL 110 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHHH----HHhcchhHHHHHHHHHHHHHHHHH
Confidence 3578999999998887777654333222 223334444555444455444444
No 351
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=24.24 E-value=3.1e+02 Score=20.52 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=22.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHH
Q 009563 215 RGAAGMSTFYFFSTGIALLSGIAYIFQ-TWRALYIASSIPSILFL 258 (532)
Q Consensus 215 r~~~~~~~~~~~~~G~~~~~~l~~~l~-~wr~~f~~~~~~~~~~~ 258 (532)
-|...++...+.++|... .-.+. .|-.+|.+.+++.+...
T Consensus 27 ~GfslS~L~~slgv~Q~~----~kvialQWIFAFvI~avlfv~sl 67 (97)
T PF08611_consen 27 MGFSLSYLTASLGVGQFF----IKVIALQWIFAFVIAAVLFVLSL 67 (97)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445554444444444 33333 67777777777666654
No 352
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=23.54 E-value=33 Score=30.15 Aligned_cols=102 Identities=13% Similarity=0.060 Sum_probs=62.8
Q ss_pred CceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 009563 113 SSTVTQWGLFCEEKYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFSPNYSTYVVLRMLTG 192 (532)
Q Consensus 113 ~~i~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 192 (532)
--+.+.+|+ +..+--=+.+.|.+|..+|.++.+.++-- + ..+ +...-...-.-.|
T Consensus 128 aiI~ekYGl---dSpEgrGVl~~Yi~GTvfGtiffsllas~-~-------------------a~~--~~fhP~ALAMasG 182 (241)
T PF11299_consen 128 AIISEKYGL---DSPEGRGVLGVYIIGTVFGTIFFSLLASL-L-------------------ASL--GIFHPYALAMASG 182 (241)
T ss_pred eeeehhcCC---CCccccceEEEeeehhhHHHHHHHHHHHH-H-------------------Hhc--cCCCHHHHHHHcC
Confidence 457788888 55555555677888888887777766542 1 000 0001122333468
Q ss_pred hhccccchhhhheeecccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009563 193 FSTGGVGLCAFVLATEPVGPSKRGAAGMSTFYFFSTGIALLSGIAYIF 240 (532)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l 240 (532)
+|+|....++..-+.+.+| +......++.....-+....|-.+.-++
T Consensus 183 vGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 183 VGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred CcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888886 5556666666666666655555544443
No 353
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=23.39 E-value=2.6e+02 Score=22.93 Aligned_cols=26 Identities=23% Similarity=0.424 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCchH
Q 009563 133 QALFFFGCMIGAGVFGHLSDSRLGRKG 159 (532)
Q Consensus 133 ~s~~~l~~~~~~~~~g~l~dr~~Grr~ 159 (532)
+.-|.+|+.+.+.+.|++.+| ..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~-~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAER-LKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHh-ccccc
Confidence 456888999999999999998 67763
No 354
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=22.82 E-value=2.8e+02 Score=23.95 Aligned_cols=30 Identities=27% Similarity=0.098 Sum_probs=21.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009563 212 PSKRGAAGMSTFYFFSTGIALLSGIAYIFQ 241 (532)
Q Consensus 212 ~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 241 (532)
.++.+++..+.-.+..+|.++|..+..++.
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~ 165 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLP 165 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 345577777777777788888877776664
No 355
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=22.79 E-value=2.4e+02 Score=24.99 Aligned_cols=69 Identities=7% Similarity=-0.023 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhcccc--cCchhHhhcCCHHHHHHHHHHHH
Q 009563 220 MSTFYFFSTGIALLSGIAYIFQTWRALYIASSIPSILFLLIILPFLP--ESPRWYLVRGKLNEAMKIMRAIA 289 (532)
Q Consensus 220 ~~~~~~~~~G~~~~~~l~~~l~~wr~~f~~~~~~~~~~~~~~~~~~~--esp~~~~~~~~~~~~~~~~~~~~ 289 (532)
.++..+..++.++..++.+++.++.|.+.+.+++..+++ ..+.+-+ |..-|-..+++.-.+...++.+.
T Consensus 28 ~~~ml~a~l~~~~v~v~ig~l~~~~~~~~i~gi~~g~l~-am~vl~rra~ra~Y~qieGqpGAa~avL~~lr 98 (224)
T PF13829_consen 28 PWLMLGAFLGPIAVFVLIGLLFGSWWYWLIIGILLGLLA-AMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLR 98 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCchHHHHHHhhc
Confidence 344444444444444444444465566666666654444 2222222 22223333455555555555443
No 356
>PRK11715 inner membrane protein; Provisional
Probab=21.90 E-value=8.1e+02 Score=24.48 Aligned_cols=77 Identities=17% Similarity=0.194 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhhhCCchh-----HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhhhhhHhhhccccccc
Q 009563 386 MPAFTITAVLLDKLGRKPM-----TIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPT 460 (532)
Q Consensus 386 ~~~~~~~~~l~d~~gr~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 460 (532)
+.-++++-++.+.+.++++ +++|+.+...-++++.+..+.... ..++.... .+..+...|+......
T Consensus 311 I~LTF~~fFlfE~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEHigF~--~AYliAa~------a~v~li~~Y~~~vl~~ 382 (436)
T PRK11715 311 IALTFAAFFLFELLKKLRIHPVQYLLVGLALVLFYLLLLSLSEHIGFT--LAYLIAAL------ACVLLIGFYLSAVLRS 382 (436)
T ss_pred HHHHHHHHHHHHHhcCceecHHHHHHHHHHHHHHHHHHHHHHhhhchH--HHHHHHHH------HHHHHHHHHHHHHHhc
Confidence 3344555566677666543 345555555555555554443322 11221111 2222334455555555
Q ss_pred hhhhhHHHHH
Q 009563 461 VVRNAALGCA 470 (532)
Q Consensus 461 ~~r~~~~g~~ 470 (532)
..|+..++..
T Consensus 383 ~k~g~~~~~~ 392 (436)
T PRK11715 383 WKRGLLFAAA 392 (436)
T ss_pred chHHHHHHHH
Confidence 5566555443
No 357
>PRK11469 hypothetical protein; Provisional
Probab=21.11 E-value=5.4e+02 Score=22.13 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHH
Q 009563 387 PAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLG 419 (532)
Q Consensus 387 ~~~~~~~~l~d~~gr~~~~~~~~~~~~~~~~~~ 419 (532)
.|..++.++.+++++|.-+..+.++..++.-.+
T Consensus 150 ~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 150 LGMMVGRFIGSIIGKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555566777766666666666655443
No 358
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=20.71 E-value=3.2e+02 Score=19.36 Aligned_cols=48 Identities=17% Similarity=0.220 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhcccccCch
Q 009563 220 MSTFYFFSTGIALLSGIAYIFQTWRALYIASSIPSILFLLIILPFLPESPR 270 (532)
Q Consensus 220 ~~~~~~~~~G~~~~~~l~~~l~~wr~~f~~~~~~~~~~~~~~~~~~~esp~ 270 (532)
-+.+....++.+++.++|....+.+..+++.++-.++ .+...+|+=|-
T Consensus 11 ~l~~~il~~~~iisfi~Gy~~q~~~~~~~~~~~g~~~---~~lv~vP~Wp~ 58 (76)
T PF06645_consen 11 KLMQYILIISAIISFIVGYITQSFSYTFYIYGAGVVL---TLLVVVPPWPF 58 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhheeCCcHh
Confidence 4556666667777777766665777777766655544 33445666553
No 359
>PRK03818 putative transporter; Validated
Probab=20.33 E-value=8.6e+02 Score=25.24 Aligned_cols=82 Identities=15% Similarity=0.050 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHhhccccchhhhh
Q 009563 126 KYKVGLVQALFFFGCMIGAGVFGHLSDSRLGRKGSLTVVCMMNAVFGCLTAFS-PNYSTYVVLRMLTGFSTGGVGLCAFV 204 (532)
Q Consensus 126 ~~~~~~~~s~~~l~~~~~~~~~g~l~dr~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 204 (532)
-.+.|+..-++.+|...|.-+..-+... .|.+..+ ++.++..+..++..+. ....-+=..+.+-.++.+...+...+
T Consensus 434 l~~~GL~lFla~vGl~aG~~f~~~~~~~-~G~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~ 511 (552)
T PRK03818 434 LRELGIVLFLAVVGLKSGGDFVDTLVNG-EGLSWIG-YGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALA 511 (552)
T ss_pred HHHHhHHHHHHHHHhhhhHHHHHHHhcc-chHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHH
Confidence 3568888888888988888887776665 5766544 4444444443333322 22222222333444555666677778
Q ss_pred eeecc
Q 009563 205 LATEP 209 (532)
Q Consensus 205 ~i~~~ 209 (532)
++.|.
T Consensus 512 ~a~~~ 516 (552)
T PRK03818 512 FANNL 516 (552)
T ss_pred HHhcc
Confidence 88875
Done!