Query 009569
Match_columns 532
No_of_seqs 833 out of 4119
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 08:08:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009569.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009569hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 7.7E-47 2.6E-51 384.1 34.1 381 62-517 7-410 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 4.9E-40 1.7E-44 320.1 38.1 254 263-523 4-264 (304)
3 3ow8_A WD repeat-containing pr 100.0 2.3E-39 7.9E-44 317.8 36.9 269 237-517 50-320 (321)
4 3ow8_A WD repeat-containing pr 100.0 1.2E-38 4.1E-43 312.6 37.3 256 262-522 22-283 (321)
5 1vyh_C Platelet-activating fac 100.0 4.4E-39 1.5E-43 326.9 34.8 251 264-521 100-372 (410)
6 1got_B GT-beta; complex (GTP-b 100.0 2E-38 6.7E-43 313.8 37.2 267 237-515 69-340 (340)
7 3frx_A Guanine nucleotide-bind 100.0 7E-38 2.4E-42 307.0 38.0 254 263-519 8-318 (319)
8 1got_B GT-beta; complex (GTP-b 100.0 1.4E-37 4.7E-42 307.8 39.6 255 261-521 44-304 (340)
9 4ery_A WD repeat-containing pr 100.0 7.1E-38 2.4E-42 305.7 36.5 257 262-522 13-272 (312)
10 4gqb_B Methylosome protein 50; 100.0 9E-38 3.1E-42 309.1 36.6 246 269-520 79-333 (344)
11 2pbi_B Guanine nucleotide-bind 100.0 2E-37 6.9E-42 308.3 38.8 251 261-515 53-354 (354)
12 2xzm_R RACK1; ribosome, transl 100.0 7.9E-37 2.7E-41 302.7 36.6 274 236-519 40-341 (343)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.1E-37 2.8E-41 302.9 35.0 255 262-519 5-284 (345)
14 3iz6_a 40S ribosomal protein R 100.0 7.6E-37 2.6E-41 307.2 32.9 252 262-520 56-377 (380)
15 1erj_A Transcriptional repress 100.0 5E-36 1.7E-40 302.7 38.7 241 273-518 124-389 (393)
16 2ynn_A Coatomer subunit beta'; 100.0 3.5E-36 1.2E-40 292.8 35.0 267 237-518 27-302 (304)
17 2xzm_R RACK1; ribosome, transl 100.0 2E-35 6.7E-40 292.6 40.0 255 262-521 11-288 (343)
18 1nr0_A Actin interacting prote 100.0 6.6E-36 2.2E-40 319.3 38.1 270 238-520 163-569 (611)
19 2pm7_B Protein transport prote 100.0 3.9E-36 1.3E-40 291.5 32.6 250 265-518 2-285 (297)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.3E-36 2.5E-40 296.0 35.1 276 237-520 30-337 (345)
21 4ery_A WD repeat-containing pr 100.0 1.3E-35 4.4E-40 289.7 36.3 267 237-517 37-311 (312)
22 2hes_X YDR267CP; beta-propelle 100.0 6.8E-36 2.3E-40 294.3 34.2 273 237-518 26-328 (330)
23 1nr0_A Actin interacting prote 100.0 4.6E-36 1.6E-40 320.5 34.4 254 262-522 49-359 (611)
24 4g56_B MGC81050 protein; prote 100.0 1.5E-36 5E-41 302.4 26.8 248 266-519 88-344 (357)
25 3bg1_A Protein SEC13 homolog; 100.0 4.5E-36 1.5E-40 293.7 28.8 248 267-518 8-293 (316)
26 1erj_A Transcriptional repress 100.0 4.6E-35 1.6E-39 295.6 36.0 244 270-521 62-344 (393)
27 2hes_X YDR267CP; beta-propelle 100.0 5.9E-35 2E-39 287.6 35.4 252 262-520 4-282 (330)
28 2ymu_A WD-40 repeat protein; u 100.0 4.8E-35 1.6E-39 310.3 36.8 257 240-515 320-577 (577)
29 4aow_A Guanine nucleotide-bind 100.0 2.9E-34 1E-38 282.8 38.8 253 263-520 29-339 (340)
30 4gqb_B Methylosome protein 50; 100.0 1.4E-35 4.9E-40 293.3 28.9 247 270-522 28-293 (344)
31 4g56_B MGC81050 protein; prote 100.0 1.3E-35 4.4E-40 295.6 27.1 250 268-522 38-305 (357)
32 3jrp_A Fusion protein of prote 100.0 1.9E-34 6.5E-39 288.3 33.3 252 263-518 2-287 (379)
33 2ymu_A WD-40 repeat protein; u 100.0 5.8E-34 2E-38 302.0 38.6 249 259-518 290-539 (577)
34 3dm0_A Maltose-binding peripla 100.0 3.9E-34 1.3E-38 310.3 37.7 273 238-518 398-693 (694)
35 1gxr_A ESG1, transducin-like e 100.0 1.7E-33 5.9E-38 276.6 38.6 262 244-516 71-335 (337)
36 3f3f_A Nucleoporin SEH1; struc 100.0 3.4E-34 1.2E-38 282.2 33.2 253 266-521 5-340 (351)
37 1gxr_A ESG1, transducin-like e 100.0 2.8E-33 9.7E-38 275.1 38.4 250 267-522 46-300 (337)
38 1sq9_A Antiviral protein SKI8; 100.0 2.9E-34 9.8E-39 289.5 29.5 279 236-520 27-397 (397)
39 3vl1_A 26S proteasome regulato 100.0 1.8E-34 6E-39 293.4 27.8 268 237-519 70-366 (420)
40 3zwl_B Eukaryotic translation 100.0 6E-33 2E-37 276.2 37.3 269 237-520 46-348 (369)
41 3dm0_A Maltose-binding peripla 100.0 2E-33 6.8E-38 304.8 36.6 252 264-521 374-635 (694)
42 3k26_A Polycomb protein EED; W 100.0 1.6E-34 5.4E-39 287.4 25.7 267 238-518 37-366 (366)
43 4aez_A CDC20, WD repeat-contai 100.0 2E-33 7E-38 284.3 33.6 269 238-522 106-384 (401)
44 3ei3_B DNA damage-binding prot 100.0 3.9E-33 1.3E-37 280.2 34.5 255 262-523 63-344 (383)
45 3ei3_B DNA damage-binding prot 100.0 1.8E-33 6.1E-38 282.7 31.2 267 237-518 88-382 (383)
46 1k8k_C P40, ARP2/3 complex 41 100.0 2.7E-33 9.3E-38 279.5 32.1 245 268-518 4-274 (372)
47 1k8k_C P40, ARP2/3 complex 41 100.0 4.4E-33 1.5E-37 277.9 33.4 274 237-519 22-362 (372)
48 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-32 3.9E-37 268.0 35.0 269 235-522 29-300 (313)
49 2pm9_A Protein WEB1, protein t 100.0 1.7E-33 5.9E-38 285.5 29.0 271 242-521 42-340 (416)
50 3dwl_C Actin-related protein 2 100.0 2.5E-34 8.5E-39 288.1 22.4 245 267-518 6-281 (377)
51 3mkq_A Coatomer beta'-subunit; 100.0 7.1E-33 2.4E-37 305.8 36.1 253 263-522 4-263 (814)
52 3dw8_B Serine/threonine-protei 100.0 3.2E-33 1.1E-37 286.5 30.8 250 271-523 27-378 (447)
53 4e54_B DNA damage-binding prot 100.0 1.1E-33 3.9E-38 289.4 27.1 256 265-524 112-393 (435)
54 3gre_A Serine/threonine-protei 100.0 1.4E-33 4.8E-38 288.7 27.1 262 258-523 48-364 (437)
55 3zwl_B Eukaryotic translation 100.0 3.2E-32 1.1E-36 270.9 35.9 249 264-522 24-308 (369)
56 3dwl_C Actin-related protein 2 100.0 8.2E-34 2.8E-38 284.3 24.0 228 237-471 25-280 (377)
57 2aq5_A Coronin-1A; WD40 repeat 100.0 2.3E-33 7.8E-38 284.0 27.4 281 240-526 52-350 (402)
58 1sq9_A Antiviral protein SKI8; 100.0 3.7E-33 1.3E-37 281.3 28.4 253 263-522 7-326 (397)
59 4gga_A P55CDC, cell division c 100.0 2.7E-32 9.1E-37 277.9 34.6 272 231-519 112-396 (420)
60 1yfq_A Cell cycle arrest prote 100.0 1E-32 3.5E-37 272.1 30.1 251 265-521 4-285 (342)
61 3k26_A Polycomb protein EED; W 100.0 1.9E-32 6.6E-37 272.3 32.3 251 266-521 12-321 (366)
62 3i2n_A WD repeat-containing pr 100.0 5.3E-33 1.8E-37 275.6 28.0 264 244-520 43-355 (357)
63 4a11_B DNA excision repair pro 100.0 5.3E-32 1.8E-36 273.3 35.8 256 262-521 33-368 (408)
64 4h5i_A Guanine nucleotide-exch 100.0 4.2E-32 1.4E-36 271.0 34.5 197 318-520 134-345 (365)
65 1r5m_A SIR4-interacting protei 100.0 7E-33 2.4E-37 281.2 29.2 264 237-517 122-424 (425)
66 3odt_A Protein DOA1; ubiquitin 100.0 7.3E-32 2.5E-36 262.2 35.0 248 262-523 8-260 (313)
67 2pm9_A Protein WEB1, protein t 100.0 6.1E-34 2.1E-38 288.8 19.9 275 238-519 82-415 (416)
68 3vl1_A 26S proteasome regulato 100.0 2.4E-32 8.3E-37 277.7 31.5 268 237-518 111-419 (420)
69 3v7d_B Cell division control p 100.0 1.7E-31 6E-36 275.3 38.2 267 236-523 133-426 (464)
70 3i2n_A WD repeat-containing pr 100.0 2.4E-32 8.1E-37 270.9 29.4 253 262-520 8-293 (357)
71 1r5m_A SIR4-interacting protei 100.0 7.9E-32 2.7E-36 273.4 33.3 240 271-520 107-363 (425)
72 2j04_B YDR362CP, TAU91; beta p 100.0 3.8E-33 1.3E-37 290.1 23.9 274 239-519 177-518 (524)
73 3mmy_A MRNA export factor; mRN 100.0 5.1E-32 1.7E-36 269.3 31.0 254 259-518 26-346 (368)
74 3jro_A Fusion protein of prote 100.0 1.4E-32 4.8E-37 300.2 28.3 251 265-519 2-286 (753)
75 4e54_B DNA damage-binding prot 100.0 6.6E-33 2.3E-37 283.7 23.4 275 237-522 134-434 (435)
76 2pbi_B Guanine nucleotide-bind 100.0 2E-31 6.8E-36 265.0 32.7 228 238-469 121-354 (354)
77 2j04_B YDR362CP, TAU91; beta p 100.0 2.3E-32 7.8E-37 284.2 25.7 252 262-519 124-429 (524)
78 3v7d_B Cell division control p 100.0 1E-30 3.5E-35 269.5 37.7 245 263-521 112-384 (464)
79 3gre_A Serine/threonine-protei 100.0 6E-32 2E-36 276.5 27.9 275 236-515 77-437 (437)
80 4ggc_A P55CDC, cell division c 100.0 5.8E-31 2E-35 256.6 33.3 272 231-519 32-316 (318)
81 1p22_A F-BOX/WD-repeat protein 100.0 4.3E-31 1.5E-35 270.2 31.7 259 237-521 145-417 (435)
82 2xyi_A Probable histone-bindin 100.0 2.5E-31 8.7E-36 271.5 29.4 250 266-519 122-411 (430)
83 3frx_A Guanine nucleotide-bind 100.0 1.1E-30 3.8E-35 255.7 32.8 230 237-473 32-268 (319)
84 3sfz_A APAF-1, apoptotic pepti 100.0 8.7E-31 3E-35 302.3 37.4 248 264-518 607-913 (1249)
85 3sfz_A APAF-1, apoptotic pepti 100.0 1.4E-30 4.9E-35 300.5 35.3 254 262-522 647-1038(1249)
86 1yfq_A Cell cycle arrest prote 100.0 7.7E-31 2.6E-35 258.6 28.4 261 237-515 25-321 (342)
87 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.3E-29 4.6E-34 259.9 38.6 262 236-523 130-396 (445)
88 3dw8_B Serine/threonine-protei 100.0 1E-30 3.5E-35 267.7 29.4 275 237-517 42-445 (447)
89 3iz6_a 40S ribosomal protein R 100.0 5.5E-31 1.9E-35 264.5 26.3 234 237-473 122-376 (380)
90 1pgu_A Actin interacting prote 100.0 2E-30 6.7E-35 276.6 32.1 268 244-520 38-330 (615)
91 2pm7_B Protein transport prote 100.0 2E-30 7E-35 251.2 28.6 231 237-473 23-286 (297)
92 4aez_A CDC20, WD repeat-contai 100.0 3.9E-30 1.3E-34 260.2 31.3 244 268-523 87-341 (401)
93 3mkq_A Coatomer beta'-subunit; 100.0 3.5E-30 1.2E-34 284.3 32.9 267 238-519 28-303 (814)
94 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-30 6.5E-35 262.5 26.1 244 274-520 36-301 (402)
95 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.5E-29 5.1E-34 259.9 32.2 241 272-516 4-337 (450)
96 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6E-29 2.1E-33 255.0 36.2 260 236-519 170-443 (445)
97 1pgu_A Actin interacting prote 100.0 1.5E-29 5.1E-34 269.8 31.6 244 270-521 16-286 (615)
98 3bg1_A Protein SEC13 homolog; 100.0 2E-30 6.9E-35 253.5 22.3 230 237-472 27-293 (316)
99 1p22_A F-BOX/WD-repeat protein 100.0 5.8E-29 2E-33 254.4 33.8 236 266-520 127-367 (435)
100 1l0q_A Surface layer protein; 100.0 5.1E-28 1.7E-32 243.4 38.0 266 238-522 5-279 (391)
101 3lrv_A PRE-mRNA-splicing facto 100.0 9.1E-30 3.1E-34 251.8 23.6 230 279-519 43-293 (343)
102 4h5i_A Guanine nucleotide-exch 100.0 3.9E-29 1.3E-33 249.5 27.6 199 270-473 131-344 (365)
103 4gq1_A NUP37; propeller, trans 100.0 3.4E-29 1.2E-33 252.6 24.6 241 271-516 88-387 (393)
104 4aow_A Guanine nucleotide-bind 100.0 6E-28 2E-32 237.6 32.5 233 237-473 53-338 (340)
105 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.7E-28 1.6E-32 248.8 32.9 244 269-518 99-391 (450)
106 2oaj_A Protein SNI1; WD40 repe 100.0 2.5E-28 8.4E-33 270.8 32.9 239 268-516 13-310 (902)
107 3f3f_A Nucleoporin SEH1; struc 100.0 2.5E-28 8.7E-33 240.1 28.6 239 237-479 25-343 (351)
108 4gga_A P55CDC, cell division c 100.0 1.6E-27 5.4E-32 242.6 35.2 238 274-521 107-356 (420)
109 3jrp_A Fusion protein of prote 100.0 3.8E-28 1.3E-32 242.5 30.0 231 237-473 25-288 (379)
110 3vu4_A KMHSV2; beta-propeller 100.0 3.6E-28 1.2E-32 241.6 28.8 238 263-520 10-273 (355)
111 3lrv_A PRE-mRNA-splicing facto 100.0 2.7E-28 9.1E-33 241.3 27.7 265 235-520 48-335 (343)
112 3bws_A Protein LP49; two-domai 100.0 2.1E-27 7.2E-32 242.3 34.5 263 239-518 138-432 (433)
113 4a11_B DNA excision repair pro 100.0 5.7E-28 2E-32 243.7 28.9 273 236-518 57-405 (408)
114 2j04_A TAU60, YPL007P, hypothe 100.0 9E-29 3.1E-33 251.6 22.1 229 266-517 46-296 (588)
115 2oaj_A Protein SNI1; WD40 repe 100.0 1.2E-28 4E-33 273.3 22.6 250 267-521 430-786 (902)
116 4ggc_A P55CDC, cell division c 100.0 2.3E-26 7.8E-31 224.0 35.2 253 260-522 9-277 (318)
117 2w18_A PALB2, fancn, partner a 100.0 7.3E-27 2.5E-31 223.6 30.1 237 274-516 41-355 (356)
118 2j04_A TAU60, YPL007P, hypothe 100.0 2.1E-27 7.1E-32 241.7 26.8 222 270-507 83-350 (588)
119 2xyi_A Probable histone-bindin 100.0 3.5E-27 1.2E-31 240.8 27.0 236 237-473 143-411 (430)
120 2w18_A PALB2, fancn, partner a 100.0 1.8E-26 6.1E-31 220.9 26.0 195 272-470 111-355 (356)
121 3jro_A Fusion protein of prote 100.0 5.4E-27 1.9E-31 256.1 25.6 230 237-472 23-285 (753)
122 3bws_A Protein LP49; two-domai 100.0 4.9E-26 1.7E-30 232.1 31.1 254 263-523 114-395 (433)
123 4gq1_A NUP37; propeller, trans 99.9 6.4E-27 2.2E-31 235.9 22.1 230 237-472 103-389 (393)
124 3vu4_A KMHSV2; beta-propeller 99.9 2.4E-25 8.1E-30 221.2 28.4 232 273-520 59-338 (355)
125 3mmy_A MRNA export factor; mRN 99.9 6.5E-26 2.2E-30 225.1 24.0 227 236-471 55-345 (368)
126 1l0q_A Surface layer protein; 99.9 1.5E-24 5.1E-29 218.0 33.6 226 285-521 3-236 (391)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.2E-25 1.8E-29 223.4 26.5 260 246-524 94-393 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.7E-23 2E-27 208.4 30.1 226 262-499 168-409 (415)
129 1ri6_A Putative isomerase YBHE 99.9 3.4E-22 1.2E-26 196.4 30.9 272 242-524 12-316 (343)
130 3u4y_A Uncharacterized protein 99.9 4.4E-22 1.5E-26 195.1 28.9 271 240-524 15-310 (331)
131 1nir_A Nitrite reductase; hemo 99.9 1.2E-21 4.2E-26 204.9 30.6 266 238-522 152-462 (543)
132 2ojh_A Uncharacterized protein 99.9 2.9E-22 1E-26 192.1 23.2 249 242-509 19-293 (297)
133 1pby_B Quinohemoprotein amine 99.9 9.8E-22 3.3E-26 192.6 24.2 264 238-522 4-314 (337)
134 3hfq_A Uncharacterized protein 99.9 1.1E-20 3.9E-25 186.5 31.7 252 269-525 36-326 (347)
135 2ecf_A Dipeptidyl peptidase IV 99.9 3.5E-22 1.2E-26 218.1 22.4 238 272-517 36-366 (741)
136 3vgz_A Uncharacterized protein 99.9 1.1E-20 3.7E-25 186.7 30.8 242 271-522 39-307 (353)
137 2ojh_A Uncharacterized protein 99.9 4.3E-21 1.5E-25 183.9 25.7 227 289-525 17-265 (297)
138 1nir_A Nitrite reductase; hemo 99.9 9.6E-21 3.3E-25 198.2 28.4 229 280-518 145-402 (543)
139 3u4y_A Uncharacterized protein 99.9 2.3E-20 7.9E-25 182.8 28.8 233 279-521 4-255 (331)
140 3o4h_A Acylamino-acid-releasin 99.9 5.4E-21 1.8E-25 202.8 24.0 233 271-516 20-274 (582)
141 1xfd_A DIP, dipeptidyl aminope 99.9 4.2E-21 1.4E-25 208.9 23.7 264 242-518 34-393 (723)
142 3vgz_A Uncharacterized protein 99.9 1.1E-19 3.7E-24 179.5 31.8 237 263-509 80-335 (353)
143 1ri6_A Putative isomerase YBHE 99.9 5.5E-20 1.9E-24 180.6 29.3 228 286-517 7-261 (343)
144 3scy_A Hypothetical bacterial 99.9 1.2E-19 4.2E-24 180.2 31.6 248 271-524 48-345 (361)
145 2ecf_A Dipeptidyl peptidase IV 99.9 1E-20 3.4E-25 206.5 25.0 235 274-518 110-413 (741)
146 1jmx_B Amine dehydrogenase; ox 99.9 2E-20 6.8E-25 184.4 24.3 232 277-522 4-329 (349)
147 1xfd_A DIP, dipeptidyl aminope 99.9 1.6E-21 5.5E-26 212.2 17.9 239 274-520 18-347 (723)
148 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-20 4E-25 192.2 21.9 201 272-473 36-279 (434)
149 2z3z_A Dipeptidyl aminopeptida 99.9 2.5E-20 8.4E-25 202.3 24.2 249 262-520 110-437 (706)
150 2z3z_A Dipeptidyl aminopeptida 99.9 5.3E-20 1.8E-24 199.7 26.0 243 273-524 82-397 (706)
151 2oit_A Nucleoporin 214KDA; NH2 99.8 2.7E-19 9.3E-24 182.1 27.7 201 270-470 90-331 (434)
152 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.8E-19 1.3E-23 177.1 27.7 245 271-522 38-345 (365)
153 1k32_A Tricorn protease; prote 99.8 1E-19 3.5E-24 205.8 24.3 246 264-521 195-464 (1045)
154 1k32_A Tricorn protease; prote 99.8 9.3E-20 3.2E-24 206.2 23.8 259 239-518 218-502 (1045)
155 3pe7_A Oligogalacturonate lyas 99.8 3.4E-19 1.2E-23 178.5 21.6 259 262-525 20-336 (388)
156 3o4h_A Acylamino-acid-releasin 99.8 3.1E-19 1E-23 189.2 22.3 241 259-518 50-315 (582)
157 1z68_A Fibroblast activation p 99.8 1.4E-19 4.9E-24 196.7 16.4 238 277-522 20-350 (719)
158 4a5s_A Dipeptidyl peptidase 4 99.8 6.7E-19 2.3E-23 191.9 20.8 243 274-525 18-360 (740)
159 1pby_B Quinohemoprotein amine 99.8 1.2E-18 4.1E-23 170.6 20.6 226 285-522 2-273 (337)
160 1q7f_A NHL, brain tumor CG1071 99.8 6.8E-17 2.3E-21 154.8 31.1 240 270-518 27-280 (286)
161 3hfq_A Uncharacterized protein 99.8 5.7E-17 2E-21 159.8 29.3 208 264-471 77-316 (347)
162 1jmx_B Amine dehydrogenase; ox 99.8 1.6E-17 5.4E-22 163.4 25.1 228 239-483 15-335 (349)
163 3c5m_A Oligogalacturonate lyas 99.8 9.5E-18 3.2E-22 168.2 18.8 250 263-524 21-335 (396)
164 1z68_A Fibroblast activation p 99.8 7.5E-18 2.6E-22 183.1 19.3 258 243-518 34-391 (719)
165 3pe7_A Oligogalacturonate lyas 99.8 3.4E-17 1.2E-21 163.9 20.0 249 262-517 70-381 (388)
166 3fvz_A Peptidyl-glycine alpha- 99.8 3.7E-16 1.3E-20 153.0 26.8 240 272-519 23-323 (329)
167 2xdw_A Prolyl endopeptidase; a 99.7 9.2E-16 3.2E-20 166.4 31.0 241 270-520 122-416 (710)
168 2oiz_A Aromatic amine dehydrog 99.7 6.5E-16 2.2E-20 153.3 26.3 261 244-523 30-339 (361)
169 3azo_A Aminopeptidase; POP fam 99.7 1.1E-16 3.7E-21 172.3 22.0 250 266-523 17-330 (662)
170 3scy_A Hypothetical bacterial 99.7 1.9E-15 6.4E-20 149.9 29.4 205 265-471 92-336 (361)
171 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.3E-15 7.9E-20 149.6 28.4 234 286-522 4-296 (365)
172 3e5z_A Putative gluconolactona 99.7 4.5E-15 1.5E-19 142.9 28.5 245 263-522 18-290 (296)
173 2dg1_A DRP35, lactonase; beta 99.7 1.7E-14 5.9E-19 141.1 32.5 249 262-517 34-315 (333)
174 3c5m_A Oligogalacturonate lyas 99.7 2.9E-16 1E-20 157.3 19.6 239 276-522 84-388 (396)
175 2bkl_A Prolyl endopeptidase; m 99.7 1.2E-15 3.9E-20 165.1 25.1 244 270-524 118-403 (695)
176 3azo_A Aminopeptidase; POP fam 99.7 8.6E-16 3E-20 165.2 23.5 252 264-524 59-375 (662)
177 2dg1_A DRP35, lactonase; beta 99.7 3.9E-15 1.3E-19 145.7 25.2 240 273-519 6-264 (333)
178 4a5s_A Dipeptidyl peptidase 4 99.7 6.2E-16 2.1E-20 168.5 21.4 218 244-473 35-354 (740)
179 2gop_A Trilobed protease; beta 99.7 1.1E-14 3.8E-19 143.3 27.2 224 273-523 59-335 (347)
180 2gop_A Trilobed protease; beta 99.7 9.6E-15 3.3E-19 143.7 25.1 219 273-521 15-294 (347)
181 1rwi_B Serine/threonine-protei 99.7 1.6E-14 5.6E-19 136.6 25.0 239 274-521 25-267 (270)
182 3no2_A Uncharacterized protein 99.6 1.5E-13 5.2E-18 130.6 28.6 214 283-505 4-230 (276)
183 2z2n_A Virginiamycin B lyase; 99.6 2.4E-12 8.1E-17 123.3 33.3 241 268-520 10-256 (299)
184 3dsm_A Uncharacterized protein 99.6 2.7E-13 9.3E-18 132.5 26.8 233 273-520 44-303 (328)
185 1yr2_A Prolyl oligopeptidase; 99.6 1.3E-13 4.4E-18 150.2 24.2 244 270-523 160-446 (741)
186 1q7f_A NHL, brain tumor CG1071 99.6 5.9E-13 2E-17 127.2 25.8 202 315-520 27-240 (286)
187 1qks_A Cytochrome CD1 nitrite 99.6 7.8E-12 2.7E-16 130.5 34.9 271 240-523 172-543 (567)
188 3fvz_A Peptidyl-glycine alpha- 99.6 5.2E-13 1.8E-17 130.6 24.5 201 270-473 88-323 (329)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.9E-12 9.9E-17 123.9 29.6 240 271-519 16-300 (314)
190 2xdw_A Prolyl endopeptidase; a 99.6 9E-13 3.1E-17 142.8 27.9 202 316-520 123-370 (710)
191 1qks_A Cytochrome CD1 nitrite 99.5 4.7E-12 1.6E-16 132.2 31.0 230 282-519 165-422 (567)
192 3hrp_A Uncharacterized protein 99.5 4.7E-12 1.6E-16 127.4 29.9 236 273-516 131-408 (409)
193 2mad_H Methylamine dehydrogena 99.5 2.7E-11 9.3E-16 120.1 34.6 247 262-524 57-356 (373)
194 2bkl_A Prolyl endopeptidase; m 99.5 4.5E-13 1.5E-17 144.8 22.3 232 282-517 77-348 (695)
195 2z2n_A Virginiamycin B lyase; 99.5 3.6E-11 1.2E-15 115.0 33.2 236 271-520 55-297 (299)
196 2qc5_A Streptogramin B lactona 99.5 7.8E-11 2.7E-15 112.7 33.8 240 270-521 17-262 (300)
197 3no2_A Uncharacterized protein 99.5 2.2E-12 7.6E-17 122.5 22.2 186 328-521 4-198 (276)
198 3e5z_A Putative gluconolactona 99.5 2.8E-12 9.5E-17 123.2 22.9 200 312-519 22-247 (296)
199 1rwi_B Serine/threonine-protei 99.5 2.6E-12 9E-17 121.3 21.7 198 271-473 65-265 (270)
200 3dsm_A Uncharacterized protein 99.5 2E-11 6.8E-16 119.2 26.6 214 262-486 74-314 (328)
201 3iuj_A Prolyl endopeptidase; h 99.5 1E-11 3.4E-16 134.0 26.7 243 270-525 126-412 (693)
202 1xip_A Nucleoporin NUP159; bet 99.5 1.5E-12 5.1E-17 128.4 17.6 173 274-460 39-232 (388)
203 3g4e_A Regucalcin; six bladed 99.5 1.5E-10 5E-15 111.3 31.2 225 270-506 10-260 (297)
204 3dr2_A Exported gluconolactona 99.5 2.4E-11 8.1E-16 117.3 25.5 234 265-515 37-303 (305)
205 2oiz_A Aromatic amine dehydrog 99.5 1.3E-11 4.3E-16 122.2 24.0 221 292-522 29-299 (361)
206 3sjl_D Methylamine dehydrogena 99.4 2E-11 6.7E-16 119.9 24.2 251 262-523 69-368 (386)
207 3c75_H MADH, methylamine dehyd 99.4 2.3E-11 7.8E-16 121.6 23.2 251 262-524 109-408 (426)
208 2qc5_A Streptogramin B lactona 99.4 4.2E-10 1.4E-14 107.5 30.9 235 270-517 59-299 (300)
209 2ghs_A AGR_C_1268P; regucalcin 99.4 9.3E-10 3.2E-14 107.1 31.1 220 274-507 50-291 (326)
210 2qe8_A Uncharacterized protein 99.4 1E-10 3.5E-15 114.9 23.9 236 273-515 17-318 (343)
211 1yr2_A Prolyl oligopeptidase; 99.4 5E-11 1.7E-15 129.7 23.7 229 282-517 116-392 (741)
212 1xip_A Nucleoporin NUP159; bet 99.3 5.8E-11 2E-15 117.1 16.5 171 319-505 39-231 (388)
213 3hrp_A Uncharacterized protein 99.3 1.9E-09 6.6E-14 108.3 26.4 192 278-470 176-408 (409)
214 3g4e_A Regucalcin; six bladed 99.3 5.5E-09 1.9E-13 100.2 28.2 200 315-522 10-233 (297)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 2.8E-09 9.5E-14 102.7 26.1 200 315-521 15-259 (314)
216 1mda_H Methylamine dehydrogena 99.2 6.3E-10 2.2E-14 109.3 19.9 215 295-522 47-350 (368)
217 2mad_H Methylamine dehydrogena 99.2 2.3E-08 8E-13 99.0 30.4 230 280-521 28-310 (373)
218 3iuj_A Prolyl endopeptidase; h 99.2 1.1E-09 3.8E-14 118.0 21.5 202 315-524 126-365 (693)
219 2ece_A 462AA long hypothetical 99.2 1.5E-08 5.3E-13 100.1 27.5 220 282-506 93-399 (462)
220 3dr2_A Exported gluconolactona 99.2 2.1E-09 7.4E-14 103.5 20.8 197 266-469 79-303 (305)
221 2hz6_A Endoplasmic reticulum t 99.1 1.8E-11 6.3E-16 121.4 5.0 189 283-482 8-201 (369)
222 2ghs_A AGR_C_1268P; regucalcin 99.1 3.7E-08 1.3E-12 95.8 27.6 190 320-518 51-260 (326)
223 3sjl_D Methylamine dehydrogena 99.1 2.2E-08 7.6E-13 98.2 25.7 231 280-522 40-324 (386)
224 1fwx_A Nitrous oxide reductase 99.1 2E-08 6.7E-13 102.8 24.9 239 282-525 99-438 (595)
225 1mda_H Methylamine dehydrogena 99.1 3.3E-09 1.1E-13 104.2 17.4 215 262-486 56-359 (368)
226 2hz6_A Endoplasmic reticulum t 99.1 4.8E-11 1.6E-15 118.4 4.0 183 328-521 8-195 (369)
227 1yiq_A Quinohemoprotein alcoho 99.1 1.8E-08 6.3E-13 108.0 23.4 231 283-522 120-509 (689)
228 3q7m_A Lipoprotein YFGL, BAMB; 99.0 1.3E-07 4.6E-12 93.6 27.3 226 283-522 102-341 (376)
229 1kb0_A Quinohemoprotein alcoho 99.0 1.4E-08 4.9E-13 108.6 21.1 232 283-522 127-511 (677)
230 1npe_A Nidogen, entactin; glyc 99.0 2.9E-07 1E-11 86.5 27.2 232 285-523 2-243 (267)
231 3c75_H MADH, methylamine dehyd 99.0 1.1E-07 3.8E-12 94.9 24.3 228 283-522 83-363 (426)
232 2fp8_A Strictosidine synthase; 99.0 2E-07 7E-12 90.2 25.7 237 274-519 20-314 (322)
233 2qe8_A Uncharacterized protein 98.9 3.8E-08 1.3E-12 96.4 18.7 193 270-466 64-315 (343)
234 2iwa_A Glutamine cyclotransfer 98.9 7.6E-07 2.6E-11 82.7 26.0 202 263-473 10-238 (266)
235 1npe_A Nidogen, entactin; glyc 98.9 1.3E-06 4.4E-11 82.0 28.1 204 273-482 36-247 (267)
236 1kb0_A Quinohemoprotein alcoho 98.9 7.7E-08 2.6E-12 103.0 21.8 194 322-518 247-567 (677)
237 2p4o_A Hypothetical protein; p 98.9 3.2E-06 1.1E-10 81.1 30.5 235 262-508 22-278 (306)
238 3q7m_A Lipoprotein YFGL, BAMB; 98.9 5.7E-07 2E-11 89.0 26.0 215 284-516 143-376 (376)
239 1fwx_A Nitrous oxide reductase 98.9 2.3E-07 8E-12 94.9 22.5 186 328-518 100-361 (595)
240 2ece_A 462AA long hypothetical 98.9 5.1E-07 1.8E-11 89.3 23.7 183 274-460 139-399 (462)
241 3hxj_A Pyrrolo-quinoline quino 98.8 2.2E-07 7.5E-12 89.9 20.1 218 284-519 107-325 (330)
242 1yiq_A Quinohemoprotein alcoho 98.8 3.5E-07 1.2E-11 98.1 23.0 161 322-483 239-515 (689)
243 2iwa_A Glutamine cyclotransfer 98.8 2.4E-06 8.2E-11 79.3 25.5 203 309-519 11-238 (266)
244 2xtc_A F-box-like/WD repeat-co 98.7 2.9E-08 1E-12 73.2 7.5 37 61-97 3-39 (90)
245 3hxj_A Pyrrolo-quinoline quino 98.7 2.3E-07 7.9E-12 89.8 16.3 253 236-520 31-285 (330)
246 3nol_A Glutamine cyclotransfer 98.7 2.4E-06 8.1E-11 78.5 21.5 187 263-461 32-244 (262)
247 2xe4_A Oligopeptidase B; hydro 98.7 6.8E-06 2.3E-10 89.1 27.8 247 270-525 170-465 (751)
248 2fp8_A Strictosidine synthase; 98.7 8.9E-06 3.1E-10 78.5 25.7 195 319-518 20-269 (322)
249 3v64_C Agrin; beta propeller, 98.7 6.4E-05 2.2E-09 73.4 31.3 240 273-523 34-280 (349)
250 1ijq_A LDL receptor, low-densi 98.6 8.9E-05 3E-09 71.3 31.1 225 287-522 4-242 (316)
251 1kv9_A Type II quinohemoprotei 98.6 4.5E-06 1.5E-10 89.2 23.2 231 284-522 117-492 (668)
252 3nok_A Glutaminyl cyclase; bet 98.6 1.5E-05 5E-10 73.2 22.8 188 263-460 44-253 (268)
253 3nol_A Glutamine cyclotransfer 98.6 1.6E-05 5.4E-10 73.0 22.9 190 309-507 33-244 (262)
254 3mbr_X Glutamine cyclotransfer 98.6 3.4E-05 1.2E-09 70.2 24.2 189 263-461 10-223 (243)
255 1k3i_A Galactose oxidase precu 98.5 2.4E-06 8.3E-11 91.3 18.2 244 277-524 190-503 (656)
256 3nok_A Glutaminyl cyclase; bet 98.5 2.5E-05 8.5E-10 71.7 22.1 165 309-482 45-219 (268)
257 4a2l_A BT_4663, two-component 98.5 0.00013 4.5E-09 79.7 32.3 239 272-523 309-576 (795)
258 3v65_B Low-density lipoprotein 98.5 0.00011 3.7E-09 72.9 28.8 238 276-524 80-324 (386)
259 3qqz_A Putative uncharacterize 98.5 9.3E-05 3.2E-09 68.2 26.1 200 267-470 21-251 (255)
260 2ad6_A Methanol dehydrogenase 98.5 1.3E-05 4.4E-10 83.9 22.8 232 284-522 115-498 (571)
261 3p5b_L Low density lipoprotein 98.5 0.00017 6E-09 71.7 30.1 228 286-523 85-325 (400)
262 3tc9_A Hypothetical hydrolase; 98.5 4.7E-05 1.6E-09 76.6 25.8 153 274-432 138-301 (430)
263 3v64_C Agrin; beta propeller, 98.5 0.00017 5.7E-09 70.4 28.9 197 273-473 73-276 (349)
264 1ijq_A LDL receptor, low-densi 98.5 0.00042 1.4E-08 66.5 31.0 205 272-480 29-245 (316)
265 4a2l_A BT_4663, two-component 98.5 0.00013 4.4E-09 79.8 30.7 238 272-522 356-618 (795)
266 3v65_B Low-density lipoprotein 98.5 0.00015 5.3E-09 71.8 28.1 205 272-481 115-326 (386)
267 3p5b_L Low density lipoprotein 98.4 0.00057 1.9E-08 68.0 32.1 209 271-481 110-328 (400)
268 3mbr_X Glutamine cyclotransfer 98.4 8.1E-05 2.8E-09 67.7 23.1 166 308-481 10-187 (243)
269 2xe4_A Oligopeptidase B; hydro 98.4 1.2E-05 4.2E-10 87.1 20.5 192 319-516 175-398 (751)
270 1w6s_A Methanol dehydrogenase 98.4 2.4E-05 8.1E-10 81.9 21.8 227 287-522 124-507 (599)
271 4hw6_A Hypothetical protein, I 98.4 0.00014 4.9E-09 73.1 26.6 191 274-470 140-372 (433)
272 1kv9_A Type II quinohemoprotei 98.4 3.5E-05 1.2E-09 82.2 22.6 161 322-483 234-498 (668)
273 1flg_A Protein (quinoprotein e 98.3 0.00018 6.3E-09 75.2 26.7 231 284-522 117-520 (582)
274 2p4o_A Hypothetical protein; p 98.3 0.00028 9.6E-09 67.4 26.2 201 309-521 24-244 (306)
275 3sov_A LRP-6, low-density lipo 98.3 0.0011 3.9E-08 63.5 29.7 222 293-523 12-243 (318)
276 3qqz_A Putative uncharacterize 98.3 0.00034 1.2E-08 64.4 24.7 201 311-518 20-253 (255)
277 3v9f_A Two-component system se 98.3 0.00024 8.1E-09 77.5 27.7 242 271-523 311-573 (781)
278 3sov_A LRP-6, low-density lipo 98.3 0.00062 2.1E-08 65.3 26.7 204 273-480 35-245 (318)
279 3kya_A Putative phosphatase; s 98.2 0.00036 1.2E-08 70.5 23.9 204 274-482 140-417 (496)
280 3v9f_A Two-component system se 98.2 0.00033 1.1E-08 76.3 25.1 236 272-521 362-614 (781)
281 3m0c_C LDL receptor, low-densi 98.2 0.0015 5E-08 70.6 29.4 224 293-523 403-637 (791)
282 3m0c_C LDL receptor, low-densi 98.2 0.0029 9.8E-08 68.3 31.4 201 272-473 423-633 (791)
283 2ad6_A Methanol dehydrogenase 98.2 0.00016 5.5E-09 75.5 21.1 160 323-483 240-504 (571)
284 1k3i_A Galactose oxidase precu 98.2 5.1E-05 1.8E-09 80.9 17.8 228 275-507 245-530 (656)
285 2p9w_A MAL S 1 allergenic prot 98.1 0.0027 9.1E-08 60.2 26.9 196 274-471 14-264 (334)
286 2xbg_A YCF48-like protein; pho 98.1 0.0032 1.1E-07 60.6 27.5 231 272-516 79-320 (327)
287 1flg_A Protein (quinoprotein e 98.1 0.00041 1.4E-08 72.5 21.9 144 339-484 291-527 (582)
288 2p9w_A MAL S 1 allergenic prot 98.1 0.0013 4.4E-08 62.4 23.0 157 317-473 12-216 (334)
289 2xbg_A YCF48-like protein; pho 98.0 0.0058 2E-07 58.8 28.5 236 272-519 35-279 (327)
290 3tc9_A Hypothetical hydrolase; 98.0 0.00043 1.5E-08 69.6 20.8 151 319-472 138-301 (430)
291 3amr_A 3-phytase; beta-propell 98.0 0.0029 9.8E-08 60.6 24.0 185 329-517 40-262 (355)
292 2ism_A Putative oxidoreductase 98.0 0.0044 1.5E-07 60.3 26.4 224 273-505 31-332 (352)
293 4a0p_A LRP6, LRP-6, low-densit 98.0 0.012 4.1E-07 61.9 31.0 231 286-525 8-244 (628)
294 2vpj_A Kelch-like protein 12; 97.9 0.0011 3.8E-08 62.9 21.1 234 283-524 14-284 (301)
295 1n7d_A LDL receptor, low-densi 97.9 4E-05 1.4E-09 82.1 11.3 221 293-523 385-619 (699)
296 2xn4_A Kelch-like protein 2; s 97.9 0.0015 5.2E-08 62.0 21.0 233 284-524 16-282 (302)
297 3a9g_A Putative uncharacterize 97.9 0.015 5.1E-07 56.5 28.2 228 272-506 28-330 (354)
298 3sre_A PON1, serum paraoxonase 97.9 0.0026 8.7E-08 61.6 22.2 192 275-470 52-296 (355)
299 3ii7_A Kelch-like protein 7; p 97.9 0.0028 9.7E-08 60.2 22.3 232 285-525 13-279 (306)
300 4hw6_A Hypothetical protein, I 97.8 0.003 1E-07 63.4 22.9 203 265-471 174-432 (433)
301 3amr_A 3-phytase; beta-propell 97.8 0.0059 2E-07 58.4 23.4 190 283-481 39-272 (355)
302 4a0p_A LRP6, LRP-6, low-densit 97.8 0.019 6.5E-07 60.4 29.6 196 273-473 37-238 (628)
303 3s94_A LRP-6, low-density lipo 97.8 0.0094 3.2E-07 62.6 26.8 224 293-523 17-248 (619)
304 4asc_A Kelch repeat and BTB do 97.8 0.0068 2.3E-07 57.8 23.5 230 286-524 7-283 (315)
305 1n7d_A LDL receptor, low-densi 97.7 9.5E-05 3.2E-09 79.2 10.8 206 273-480 406-621 (699)
306 3s94_A LRP-6, low-density lipo 97.7 0.0077 2.6E-07 63.3 25.0 199 272-473 39-244 (619)
307 1w6s_A Methanol dehydrogenase 97.7 0.0024 8.2E-08 66.8 20.7 188 329-521 62-345 (599)
308 1zgk_A Kelch-like ECH-associat 97.7 0.0059 2E-07 58.1 21.0 231 283-524 24-293 (308)
309 3ei3_A DNA damage-binding prot 97.6 0.084 2.9E-06 59.5 32.2 255 272-532 553-887 (1158)
310 3sre_A PON1, serum paraoxonase 97.6 0.035 1.2E-06 53.6 25.0 135 337-473 81-253 (355)
311 2woz_A Kelch repeat and BTB do 97.5 0.018 6E-07 55.0 22.0 228 286-524 18-293 (318)
312 2g8s_A Glucose/sorbosone dehyd 97.5 0.032 1.1E-06 54.1 23.6 234 272-511 17-347 (353)
313 3kya_A Putative phosphatase; s 97.5 0.042 1.4E-06 55.5 24.8 196 273-473 186-476 (496)
314 3s25_A Hypothetical 7-bladed b 97.4 0.015 5.1E-07 55.1 20.2 181 323-524 58-261 (302)
315 2vpj_A Kelch-like protein 12; 97.4 0.014 4.9E-07 55.0 19.5 187 283-473 62-279 (301)
316 2ism_A Putative oxidoreductase 97.3 0.048 1.6E-06 52.9 23.0 139 318-459 31-220 (352)
317 3ii7_A Kelch-like protein 7; p 97.3 0.021 7.2E-07 54.0 20.1 186 283-473 55-273 (306)
318 2xn4_A Kelch-like protein 2; s 97.3 0.016 5.6E-07 54.7 18.3 186 283-473 61-277 (302)
319 2uvk_A YJHT; unknown function, 97.2 0.024 8.1E-07 55.0 19.4 235 283-525 19-349 (357)
320 3a9g_A Putative uncharacterize 97.2 0.061 2.1E-06 52.2 22.0 140 318-459 29-215 (354)
321 1uuj_A Platelet-activating fac 97.2 0.00021 7.3E-09 52.3 3.1 55 62-117 9-63 (88)
322 3s25_A Hypothetical 7-bladed b 97.0 0.23 7.9E-06 46.8 23.2 177 277-473 57-256 (302)
323 3ott_A Two-component system se 97.0 0.48 1.6E-05 51.0 28.9 233 272-523 21-265 (758)
324 4asc_A Kelch repeat and BTB do 96.9 0.062 2.1E-06 51.0 18.8 190 280-473 42-278 (315)
325 1tl2_A L10, protein (tachylect 96.9 0.032 1.1E-06 49.3 14.9 173 330-513 5-205 (236)
326 2xzh_A Clathrin heavy chain 1; 96.9 0.3 1E-05 46.0 31.3 230 277-520 71-334 (365)
327 1bpo_A Protein (clathrin); cla 96.8 0.41 1.4E-05 46.9 30.1 232 277-520 70-333 (494)
328 3ei3_A DNA damage-binding prot 96.8 0.54 1.9E-05 53.0 28.1 174 340-518 808-999 (1158)
329 1zgk_A Kelch-like ECH-associat 96.8 0.04 1.4E-06 52.2 16.5 185 283-473 70-288 (308)
330 2woz_A Kelch repeat and BTB do 96.7 0.11 3.7E-06 49.4 18.9 190 280-473 53-288 (318)
331 3pbp_A Nucleoporin NUP82; beta 96.7 0.12 3.9E-06 50.7 18.7 144 370-517 31-211 (452)
332 3sbq_A Nitrous-oxide reductase 96.7 0.18 6.1E-06 50.9 20.1 227 287-518 73-408 (638)
333 3pbp_A Nucleoporin NUP82; beta 96.6 0.15 5.2E-06 49.8 18.9 129 339-468 41-208 (452)
334 2be1_A Serine/threonine-protei 96.6 0.042 1.4E-06 52.6 14.9 184 285-473 11-232 (339)
335 1tl2_A L10, protein (tachylect 96.6 0.031 1.1E-06 49.5 12.4 140 318-465 41-203 (236)
336 1cru_A Protein (soluble quinop 96.6 0.24 8.2E-06 49.7 20.7 103 318-420 27-162 (454)
337 1bpo_A Protein (clathrin); cla 96.5 0.68 2.3E-05 45.4 27.6 218 293-521 47-292 (494)
338 2xzh_A Clathrin heavy chain 1; 96.5 0.58 2E-05 44.1 27.6 218 293-521 48-293 (365)
339 3das_A Putative oxidoreductase 96.4 0.36 1.2E-05 46.3 20.0 145 315-459 29-219 (347)
340 1cru_A Protein (soluble quinop 96.4 0.19 6.3E-06 50.5 18.5 146 272-419 26-245 (454)
341 3das_A Putative oxidoreductase 96.3 0.79 2.7E-05 43.9 25.4 153 264-418 23-218 (347)
342 2zwa_A Leucine carboxyl methyl 96.1 0.27 9.1E-06 52.4 19.3 195 327-523 396-640 (695)
343 3ott_A Two-component system se 96.0 2.2 7.5E-05 45.8 29.3 189 272-473 62-261 (758)
344 2be1_A Serine/threonine-protei 95.9 0.084 2.9E-06 50.5 12.8 187 330-521 11-234 (339)
345 1xi4_A Clathrin heavy chain; a 95.7 0.42 1.4E-05 53.9 18.3 232 277-520 70-333 (1630)
346 2g8s_A Glucose/sorbosone dehyd 95.6 0.24 8.3E-06 47.8 14.9 141 319-460 19-215 (353)
347 2uvk_A YJHT; unknown function, 95.5 0.29 9.8E-06 47.2 15.1 194 328-525 19-301 (357)
348 2zwa_A Leucine carboxyl methyl 95.3 1.4 4.8E-05 46.8 20.8 191 282-473 396-636 (695)
349 1xi4_A Clathrin heavy chain; a 94.8 1.3 4.5E-05 50.1 18.8 217 293-520 47-291 (1630)
350 3qhy_B Beta-lactamase inhibito 93.7 2.5 8.4E-05 39.2 16.2 220 274-519 25-247 (282)
351 3sbq_A Nitrous-oxide reductase 93.2 8 0.00027 39.2 22.3 104 403-506 324-453 (638)
352 2wg3_C Hedgehog-interacting pr 92.0 11 0.00036 37.7 26.6 107 273-379 14-158 (463)
353 3b7f_A Glycosyl hydrolase, BNR 90.4 13 0.00045 35.9 24.0 181 285-469 23-259 (394)
354 3uc1_A DNA gyrase subunit A; D 88.9 16 0.00053 34.5 21.2 198 273-472 42-279 (327)
355 3b7f_A Glycosyl hydrolase, BNR 87.9 20 0.00068 34.5 22.7 185 272-459 54-296 (394)
356 3qhy_B Beta-lactamase inhibito 87.6 12 0.0004 34.5 14.1 180 319-518 25-207 (282)
357 3ukx_C Bimax2 peptide; arm rep 87.4 0.22 7.6E-06 26.0 1.1 12 5-16 16-27 (28)
358 3no0_A DNA gyrase subunit A; D 86.9 18 0.00063 33.0 20.2 194 319-518 25-246 (276)
359 3kci_A Probable E3 ubiquitin-p 86.8 23 0.0008 34.1 28.8 227 284-518 62-345 (389)
360 3ukw_C Bimax1 peptide; arm rep 86.1 0.19 6.6E-06 26.3 0.5 12 5-16 16-27 (28)
361 2d68_A FOP, FGFR1OP; alpha hel 84.2 1.1 3.7E-05 32.5 3.8 29 65-93 20-48 (82)
362 1wp5_A Topoisomerase IV; broke 83.3 30 0.001 32.4 21.9 235 282-518 3-277 (323)
363 2wg3_C Hedgehog-interacting pr 81.2 22 0.00075 35.4 13.7 105 403-508 15-159 (463)
364 3no0_A DNA gyrase subunit A; D 80.1 35 0.0012 31.1 20.4 195 273-472 24-246 (276)
365 4hvt_A Ritya.17583.B, post-pro 76.5 81 0.0028 33.3 22.0 190 325-519 137-382 (711)
366 4gq2_M Nucleoporin NUP120; bet 74.9 50 0.0017 36.3 15.3 38 319-356 237-274 (950)
367 1zi0_A DNA gyrase subunit A; b 71.0 66 0.0023 29.8 20.6 197 274-472 43-277 (307)
368 3l6v_A GYRA, DNA gyrase subuni 67.9 87 0.003 29.9 22.7 198 272-471 45-315 (370)
369 1suu_A DNA gyrase subunit A; t 66.3 84 0.0029 29.1 25.2 189 282-472 6-231 (312)
370 1wp5_A Topoisomerase IV; broke 63.2 98 0.0033 28.9 22.2 197 274-472 40-277 (323)
371 3uc1_A DNA gyrase subunit A; D 62.5 1E+02 0.0035 28.8 22.7 232 285-518 4-279 (327)
372 4hvt_A Ritya.17583.B, post-pro 60.5 1.7E+02 0.0058 30.8 25.8 235 276-521 132-432 (711)
373 3q6k_A 43.2 kDa salivary prote 60.2 1.2E+02 0.0042 29.0 23.4 133 340-472 124-306 (381)
374 1am7_A Lysozyme; glycosidase, 58.2 13 0.00046 30.6 4.8 43 123-165 86-128 (158)
375 4fhn_B Nucleoporin NUP120; pro 56.4 31 0.0011 38.8 9.2 38 319-356 239-276 (1139)
376 1sqj_A OXG-RCBH, oligoxylogluc 55.9 2.1E+02 0.0073 30.4 22.0 145 272-422 14-190 (789)
377 1zvt_A Topoisomerase IV subuni 54.9 1.2E+02 0.004 27.2 13.5 143 373-518 4-163 (256)
378 3zwu_A Alkaline phosphatase PH 51.8 44 0.0015 34.3 8.6 58 320-377 478-548 (592)
379 3l6v_A GYRA, DNA gyrase subuni 51.0 1.7E+02 0.0058 27.8 28.0 190 281-472 4-265 (370)
380 1zi0_A DNA gyrase subunit A; b 50.4 1.5E+02 0.0053 27.2 25.7 232 282-518 1-277 (307)
381 4a9v_A PHOX; hydrolase, beta-p 50.0 58 0.002 33.2 8.9 59 403-461 477-550 (592)
382 3zwu_A Alkaline phosphatase PH 49.3 43 0.0015 34.4 8.1 58 403-460 477-549 (592)
383 3mkr_A Coatomer subunit epsilo 48.7 1.1E+02 0.0036 27.8 10.2 88 63-160 64-156 (291)
384 4fhn_B Nucleoporin NUP120; pro 46.1 47 0.0016 37.3 8.5 37 443-480 239-275 (1139)
385 3bu8_A Telomeric repeat-bindin 45.0 72 0.0025 27.6 7.3 84 98-181 61-161 (235)
386 2xz2_A CSTF-50, isoform B; RNA 44.7 16 0.00054 24.8 2.6 39 56-94 8-47 (66)
387 4a9v_A PHOX; hydrolase, beta-p 43.6 1E+02 0.0034 31.5 9.5 61 318-378 476-549 (592)
388 1suu_A DNA gyrase subunit A; t 43.5 2E+02 0.0068 26.5 24.3 158 273-432 47-231 (312)
389 1zvt_A Topoisomerase IV subuni 42.7 1.8E+02 0.0063 25.9 13.6 141 331-472 4-163 (256)
390 3f7f_A Nucleoporin NUP120; nuc 42.2 41 0.0014 35.2 6.6 37 319-357 223-259 (729)
391 1oyi_A Double-stranded RNA-bin 39.7 12 0.0004 27.1 1.5 32 61-94 13-44 (82)
392 3lc0_A Histidyl-tRNA synthetas 37.8 1.2E+02 0.0041 29.9 9.1 26 54-79 153-178 (456)
393 1kdl_A YOPD protein; yersinia, 37.6 16 0.00053 19.4 1.3 14 64-77 5-18 (26)
394 3kci_A Probable E3 ubiquitin-p 37.2 2.8E+02 0.0094 26.3 26.5 195 273-473 105-346 (389)
395 4gco_A Protein STI-1; structur 35.7 1.1E+02 0.0038 23.3 7.0 85 71-161 21-108 (126)
396 3bqo_A Telomeric repeat-bindin 34.8 1.2E+02 0.0043 25.8 7.1 84 98-181 67-164 (211)
397 2jvf_A De novo protein M7; tet 34.7 17 0.00058 24.8 1.5 23 59-81 58-80 (96)
398 2k9m_A RNA polymerase sigma fa 33.6 29 0.001 27.5 3.1 85 64-163 22-121 (130)
399 3mvd_K Regulator of chromosome 33.5 3.3E+02 0.011 26.1 29.8 107 318-431 75-206 (423)
400 3q6k_A 43.2 kDa salivary prote 30.9 3.6E+02 0.012 25.7 17.4 146 273-419 152-341 (381)
401 2cp8_A NEXT to BRCA1 gene 1 pr 30.4 50 0.0017 21.5 3.2 21 61-81 3-23 (54)
402 2lni_A Stress-induced-phosphop 29.8 1.7E+02 0.0057 21.6 9.8 95 61-161 14-111 (133)
403 2j4b_A TAF5, transcription ini 29.8 79 0.0027 25.3 5.1 49 128-176 29-77 (138)
404 4gq2_M Nucleoporin NUP120; bet 27.4 6.3E+02 0.021 27.5 22.3 38 443-481 237-274 (950)
405 3f7f_A Nucleoporin NUP120; nuc 27.1 84 0.0029 33.0 5.9 37 443-482 223-259 (729)
406 4f3v_A ESX-1 secretion system 26.3 3.6E+02 0.012 24.4 11.5 94 62-161 100-198 (282)
407 1x2l_A CUT-like 2, homeobox pr 24.9 2.2E+02 0.0075 21.3 9.2 77 61-158 17-93 (101)
408 3ct5_A Morphogenesis protein 1 24.8 50 0.0017 27.2 3.2 32 63-94 14-50 (159)
409 3mvd_K Regulator of chromosome 24.2 4.7E+02 0.016 24.9 29.8 230 274-518 76-374 (423)
410 2qfc_A PLCR protein; TPR, HTH, 24.0 3.2E+02 0.011 24.2 9.1 98 64-161 76-182 (293)
411 2cn3_A Xyloglucanase, beta-1,4 23.9 6.4E+02 0.022 26.3 20.2 59 319-378 24-91 (737)
412 4d9s_A UVB-resistance protein 23.1 4.9E+02 0.017 24.7 30.8 230 274-518 17-305 (406)
413 4g26_A Pentatricopeptide repea 22.7 4.3E+02 0.015 26.2 10.3 88 65-159 107-200 (501)
414 3iz5_k 60S ribosomal protein L 22.7 28 0.00095 26.5 1.0 38 126-163 45-82 (112)
415 4a18_Q RPL36, 60S ribosomal pr 22.5 48 0.0016 24.8 2.2 43 134-176 51-96 (104)
416 1v32_A AT5G08430, hypothetical 21.9 54 0.0018 24.6 2.5 23 59-81 33-55 (101)
417 2lfh_A DNA-binding protein inh 21.6 44 0.0015 23.0 1.8 16 61-76 49-64 (68)
418 4asv_A Small glutamine-rich te 21.3 62 0.0021 23.7 2.6 16 62-77 18-33 (92)
419 1q1v_A DEK protein; winged-hel 20.6 1.3E+02 0.0044 20.8 4.0 38 59-96 10-53 (70)
420 3him_A Probable transcriptiona 20.4 1.2E+02 0.0042 25.1 5.1 59 62-120 17-81 (211)
421 3qou_A Protein YBBN; thioredox 20.1 4E+02 0.014 23.6 8.8 49 73-121 127-177 (287)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.7e-47 Score=384.06 Aligned_cols=381 Identities=17% Similarity=0.282 Sum_probs=241.8
Q ss_pred chHHHHHHHHHHHHhcChHHHHHHHhhhcCcccCCHHHHHHHHHHhcCChHHHHHHhhcCCCCChhHHHHHHHHHHHHHH
Q 009569 62 KKSEFIKIITRALYSLGYDKSGALLEEESGIPMHSSVVNQFMQQVMDGYWDESIITLHMIGLSDETAVKSASFLILEQKF 141 (532)
Q Consensus 62 ~~~e~~~lI~q~L~e~G~~~sa~~L~~Es~i~~~~~~~~~~~~~i~~G~w~~~~~~l~~l~~~~~~~~~~~~~~i~~q~~ 141 (532)
.++|++|+|+|||+|+||.+++.+|++|++++++. ....+...+++++|+.++.+-+++... +.+.
T Consensus 7 q~~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~w~~~~~l~~~~~~~-------------~~~~ 72 (410)
T 1vyh_C 7 QRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNE-ELDKKYAGLLEKKWTSVIRLQKKVMEL-------------ESKL 72 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHhCCCCCc-chhhhhhchhhhhhhheeeHHHHHHHH-------------HHHH
Confidence 47899999999999999999999999999998764 456677888999998876642222111 0100
Q ss_pred HHHHhcCChhHHHHHHhhccccCccChhhHHHhhhccccCCcccccCCCCCCcccHHHHHHHHHHHHhcCCCCccCCcch
Q 009569 142 LELLRRDKVSAALNSLRSEIVPLQINMSRVHELASCIISPSKSLTLGDSGQDTEDEKSRSKFLAKLQKLLPASVVIPEKR 221 (532)
Q Consensus 142 lelle~~~~~~a~~~L~~~l~pl~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p~~r 221 (532)
.+ +++++..... .+... ....|...... + ..+..+-.+..
T Consensus 73 ~~-------------~~~~~~~~~~--~~~~~--------------~~~~~~~~~~~-~----~~l~gh~~~V~------ 112 (410)
T 1vyh_C 73 NE-------------AKEEFTSGGP--LGQKR--------------DPKEWIPRPPE-K----YALSGHRSPVT------ 112 (410)
T ss_dssp ------------------------------------------------CCCCCCSSC-S----CEEECCSSCEE------
T ss_pred HH-------------HHHHHhccCC--ccccC--------------CccccccCCCc-e----EeecccCCcEE------
Confidence 00 0000000000 00000 00000000000 0 00000000000
Q ss_pred HHHHHHHHHHhcc-cccccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEE
Q 009569 222 LEHLVEKALDVQR-DSCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWE 300 (532)
Q Consensus 222 l~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd 300 (532)
++.+.+ ...+++++.|+.+.+|+-.+ .+....+.+|.+.|++++|+|++++|++|+.|++|++||
T Consensus 113 -------~~~~~p~~~~l~s~s~Dg~i~vwd~~~-------~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 113 -------RVIFHPVFSVMVSASEDATIKVWDYET-------GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp -------EEEECSSSSEEEEEESSSCEEEEETTT-------CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred -------EEEEcCCCCEEEEEeCCCeEEEEECCC-------CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 000111 23455667778888886543 456788999999999999999999999999999999999
Q ss_pred eecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCC
Q 009569 301 VKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTD 380 (532)
Q Consensus 301 ~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 380 (532)
+.+. .....+.+|...|.+++|+|++.+|++|+.|++|++||+.++.++..+.+|...|.++.|+|++.++++|+.|
T Consensus 179 ~~~~---~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 179 FQGF---ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp TTSS---CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCC---ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC
Confidence 9865 4667888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEECCCCeEEEeecCccCceEEEEEeeC--------------------CCEEEEEECCCeEEEEECCCCc--eeee
Q 009569 381 KSICLWDLDGRELESWKGQKTLRISDMAITDD--------------------GKRIISICREAAILLLDREANF--ERWI 438 (532)
Q Consensus 381 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~--------------------~~~l~~~~~dg~I~iwd~~~~~--~~~~ 438 (532)
+.|++||+++.........+...|.+++|+|+ +.++++++.|+.|++||++++. ..+.
T Consensus 256 ~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~ 335 (410)
T 1vyh_C 256 QTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335 (410)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE
Confidence 99999999987766666666679999999996 6789999999999999999887 6667
Q ss_pred ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCC
Q 009569 439 EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSF 517 (532)
Q Consensus 439 ~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~ 517 (532)
+|...|++++|+|++++|++++.||.|++||+.++ +.+..+.+|...+.. +.| +|++.+|++|+.||.|++|+++
T Consensus 336 ~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~-~~~~~~~~h~~~v~~--l~~-~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK-RCMKTLNAHEHFVTS--LDF-HKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS-CCCEEEECCSSCEEE--EEE-CSSSSCEEEEETTSEEEEEC--
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-ceEEEEcCCCCcEEE--EEE-cCCCCEEEEEeCCCcEEEEeCC
Confidence 89999999999999999999999999999999887 889999999988544 566 9999999999999999999863
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.9e-40 Score=320.07 Aligned_cols=254 Identities=17% Similarity=0.224 Sum_probs=227.1
Q ss_pred ceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEE
Q 009569 263 QTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIR 342 (532)
Q Consensus 263 ~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~ 342 (532)
+..+++.+|.+.|++++|+|++++|++|+.||+|++||+.++ .....+..|..+|.+++|+|++++|++|+.|++|+
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ---VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT---EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC---ceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 456788999999999999999999999999999999999876 45677889999999999999999999999999999
Q ss_pred EEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCC-eEEEeecCccCceEEEEEee-CCCEEEEEE
Q 009569 343 RWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGR-ELESWKGQKTLRISDMAITD-DGKRIISIC 420 (532)
Q Consensus 343 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~ 420 (532)
+||+.+++++..+..|...|.+++|+|+++++++|+.|++|++||++++ .+......|...|.+++|+| ++..+++++
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 9999999999999999999999999999999999999999999999865 55555666667999999999 678999999
Q ss_pred CCCeEEEEECCCCc--eee-eecCCceeEEEEcC--CCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccC
Q 009569 421 REAAILLLDREANF--ERW-IEEEEVITSFSLSK--DNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFG 495 (532)
Q Consensus 421 ~dg~I~iwd~~~~~--~~~-~~~~~~i~~~~~sp--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~ 495 (532)
.|+.|++||+++.. ... ..+...+..+.|+| ++.+|++++.|+.|++||++++ +++.++.+|...+.. +.|
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~-~~~~~~~~h~~~v~~--~~~- 236 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK-SCVATLEGHMSNVSF--AVF- 236 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEE--EEE-
T ss_pred CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC-ccceeeCCCCCCEEE--EEE-
Confidence 99999999998766 222 34567899999987 7789999999999999999998 899999999988544 556
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCCcee
Q 009569 496 GFEQAFIASGSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 496 s~d~~~l~sgs~dg~i~iw~~~~~~~~~ 523 (532)
+|++.+|++|+.||.|++||+.+++...
T Consensus 237 ~p~~~~l~s~s~Dg~i~iWd~~~~~~~~ 264 (304)
T 2ynn_A 237 HPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (304)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCceee
Confidence 9999999999999999999999876443
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=317.78 Aligned_cols=269 Identities=16% Similarity=0.226 Sum_probs=241.3
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.+++++.|+.+.+|+-... .......+.+|...|.+++|+|++.++++++.|++|++||+.++ .....+..|
T Consensus 50 ~l~tgs~D~~v~vW~~~~~-----~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~---~~~~~~~~~ 121 (321)
T 3ow8_A 50 TVVTGSLDDLVKVWKWRDE-----RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENG---KQIKSIDAG 121 (321)
T ss_dssp EEEEEETTSCEEEEEEETT-----EEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT---EEEEEEECC
T ss_pred EEEEEcCCCCEEEEECCCC-----CeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC---CEEEEEeCC
Confidence 4667888889999974321 12345578999999999999999999999999999999999876 456777889
Q ss_pred CCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEe
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESW 396 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 396 (532)
...+.+++|+|++++|++++.|+.|++||+++++....+..+...+.+++|+|++++|++|+.||.|++||++++.....
T Consensus 122 ~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 122 PVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 201 (321)
T ss_dssp TTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998877666
Q ss_pred ecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCC
Q 009569 397 KGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDP 474 (532)
Q Consensus 397 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~ 474 (532)
...+...|.+++|+|++++|++++.|+.|++||+++.. ..+..|...|.+++|+|++++|++++.|+.|++||+.++
T Consensus 202 ~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~- 280 (321)
T 3ow8_A 202 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR- 280 (321)
T ss_dssp ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-
T ss_pred EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-
Confidence 66666799999999999999999999999999999877 566789999999999999999999999999999999988
Q ss_pred cceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCC
Q 009569 475 KLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSF 517 (532)
Q Consensus 475 ~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~ 517 (532)
+++.++.+|...+.. ++| +|++.+|++++.||.|++||..
T Consensus 281 ~~~~~~~~h~~~v~~--v~~-s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 281 TCVHTFFDHQDQVWG--VKY-NGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEECCCSSCEEE--EEE-CTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEEcCCCCcEEE--EEE-CCCCCEEEEEeCCCeEEEEeCC
Confidence 899999999888544 566 8999999999999999999963
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=312.65 Aligned_cols=256 Identities=18% Similarity=0.271 Sum_probs=227.4
Q ss_pred cceeEEcccccccEEEEEEccC----CCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeC
Q 009569 262 SQTLQILEAHSDEVWFLQFSHD----GKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQ 337 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~----g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~ 337 (532)
......+++|.+.|++++|+|+ +.+|+||+.|++|+||++..+ .......+.+|...|.+++|++++.++++++.
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~-~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~ 100 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDE-RLDLQWSLEGHQLGVVSVDISHTLPIAASSSL 100 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCC-CeeeeeeeccCCCCEEEEEECCCCCEEEEEeC
Confidence 4456678899999999999985 679999999999999999854 44456678999999999999999999999999
Q ss_pred CCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEE
Q 009569 338 EEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRII 417 (532)
Q Consensus 338 dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 417 (532)
|++|++||+.+++++..+..+...+.+++|+|+++++++|+.||.|++||+++.........+...|.+++|+|++++|+
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la 180 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 180 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEE
Confidence 99999999999999999999988999999999999999999999999999987665555555555899999999999999
Q ss_pred EEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccC
Q 009569 418 SICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFG 495 (532)
Q Consensus 418 ~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~ 495 (532)
+++.|+.|++||+++++ ..+..|..+|.+++|+|++++|++++.|+.|++||+++. ..+..+.+|...+.. ++|
T Consensus 181 sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~--~~~- 256 (321)
T 3ow8_A 181 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-NLAGTLSGHASWVLN--VAF- 256 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC-CEEEEECCCSSCEEE--EEE-
T ss_pred EEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc-ceeEEEcCCCCceEE--EEE-
Confidence 99999999999999887 556678999999999999999999999999999999988 788899999887544 566
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 496 GFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 496 s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
+|++.+|++++.||.|++||+.++...
T Consensus 257 sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 257 CPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 999999999999999999999987543
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.4e-39 Score=326.88 Aligned_cols=251 Identities=18% Similarity=0.284 Sum_probs=228.3
Q ss_pred eeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEE
Q 009569 264 TLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRR 343 (532)
Q Consensus 264 ~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~i 343 (532)
....+.+|.++|++++|+|++.+|++|+.||+|++||+.++. ....+.+|...|.+++|+|++++|++|+.|++|++
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~---~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC---CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 345688999999999999999999999999999999998763 45678899999999999999999999999999999
Q ss_pred EECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCC
Q 009569 344 WDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREA 423 (532)
Q Consensus 344 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 423 (532)
||+.+++++..+.+|...|.+++|+|+++++++|+.|++|++||++++........+...|.++.++|++.++++++.|+
T Consensus 177 wd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 177 WDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp EETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 99999999999999999999999999999999999999999999987766555555666899999999999999999999
Q ss_pred eEEEEECCCCc--eeeeecCCceeEEEEcCC--------------------CCEEEEEecCCeEEEEecCCCCcceeEEe
Q 009569 424 AILLLDREANF--ERWIEEEEVITSFSLSKD--------------------NKYLLVNLINQEIHLWSIESDPKLVSRYK 481 (532)
Q Consensus 424 ~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~--------------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 481 (532)
.|++||+.+.. ..+..|...|.+++|+|+ +.+|++|+.|+.|++||++++ .++..+.
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~-~~~~~~~ 335 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLV 335 (410)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-EEEEEEE
T ss_pred eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC-ceEEEEE
Confidence 99999998877 566789999999999996 678999999999999999998 8899999
Q ss_pred ccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 482 GHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 482 ~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
+|...+.. ++| +|++.+|++|+.||.|++||+.++..
T Consensus 336 ~h~~~v~~--v~~-~~~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 336 GHDNWVRG--VLF-HSGGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp CCSSCEEE--EEE-CSSSSCEEEEETTTEEEEECCTTSCC
T ss_pred CCCCcEEE--EEE-cCCCCEEEEEeCCCeEEEEECCCCce
Confidence 99887544 556 99999999999999999999988654
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2e-38 Score=313.84 Aligned_cols=267 Identities=18% Similarity=0.251 Sum_probs=234.5
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCC-eeEEEEEeec
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDG-QVSLKHRLSG 315 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~-~~~~~~~~~~ 315 (532)
.+++++.|+.+.+|+..+ .+.+..+..|...|.+++|+|++++|++|+.|+.|++|++.+.. .......+.+
T Consensus 69 ~l~s~s~Dg~v~iWd~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~ 141 (340)
T 1got_B 69 LLLSASQDGKLIIWDSYT-------TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAG 141 (340)
T ss_dssp EEEEEETTTEEEEEETTT-------CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEEC
T ss_pred EEEEEeCCCcEEEEECCC-------CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecC
Confidence 456777788888886543 45677888999999999999999999999999999999997543 2346677889
Q ss_pred CCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEE
Q 009569 316 HRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELES 395 (532)
Q Consensus 316 h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 395 (532)
|...|.++.|++++. +++++.|++|++||+.+++++..+.+|...|.+++|+|+++++++|+.|+.|++||++++....
T Consensus 142 h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~ 220 (340)
T 1got_B 142 HTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ 220 (340)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred CCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEE
Confidence 999999999998764 8899999999999999999999999999999999999999999999999999999998876666
Q ss_pred eecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeeeec---CCceeEEEEcCCCCEEEEEecCCeEEEEecC
Q 009569 396 WKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWIEE---EEVITSFSLSKDNKYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 396 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~ 471 (532)
....|...|.+++|+|++++|++++.|+.|++||+++.. .....+ ...|++++|+|++++|++|+.||.|++||+.
T Consensus 221 ~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 666666699999999999999999999999999999876 322333 2479999999999999999999999999999
Q ss_pred CCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEe
Q 009569 472 SDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFL 515 (532)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~ 515 (532)
+. ..+..+.+|...+.. +.| +|++.+|++|+.||.|++||
T Consensus 301 ~~-~~~~~~~~h~~~v~~--~~~-s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 301 KA-DRAGVLAGHDNRVSC--LGV-TDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TC-CEEEEEECCSSCEEE--EEE-CTTSSCEEEEETTSCEEEEC
T ss_pred cC-cEeeEeecCCCcEEE--EEE-cCCCCEEEEEcCCccEEecC
Confidence 88 788999999988554 556 99999999999999999997
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7e-38 Score=307.03 Aligned_cols=254 Identities=19% Similarity=0.309 Sum_probs=217.5
Q ss_pred ceeEEcccccccEEEEEEccCC-CEEEEEeCCCeEEEEEeecCCe--eEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCC
Q 009569 263 QTLQILEAHSDEVWFLQFSHDG-KYLASSSKDQSAIIWEVKEDGQ--VSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEE 339 (532)
Q Consensus 263 ~~~~~l~~h~~~V~~v~~s~~g-~~las~s~dg~i~iwd~~~~~~--~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg 339 (532)
.+..++++|.+.|++++|+|++ ++|++|+.|++|++|++..... ......+.+|...|.+++|+|++++|++|+.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 4566789999999999999965 8999999999999999974322 235678899999999999999999999999999
Q ss_pred cEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeC------C
Q 009569 340 AIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDD------G 413 (532)
Q Consensus 340 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~------~ 413 (532)
+|++||+.+++++..+.+|...|.+++|+|++.++++|+.|++|++||+++..+..+..+. ..|.+++|+|. +
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHN-DWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCS-SCEEEEEECCC------C
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccC-CcEEEEEEccCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999987776666554 48999999985 4
Q ss_pred CEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEecccc------
Q 009569 414 KRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKR------ 485 (532)
Q Consensus 414 ~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------ 485 (532)
..+++++.|+.|++||+++.. ..+.+|...|.+++|+|++++|++++.||.|++||+.+. +.+..+..+..
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~v~~~~~ 245 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK-KAMYTLSAQDEVFSLAF 245 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT-EEEEEEECCSCEEEEEE
T ss_pred cEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEecCCCcEEEEEE
Confidence 589999999999999999877 566789999999999999999999999999999999876 55544432211
Q ss_pred ----------------------------------------ceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 486 ----------------------------------------ARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 486 ----------------------------------------~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
...+..++| +|||++|++|+.||.|++|++.++
T Consensus 246 sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 246 SPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAW-SADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEE-CTTSSEEEEEETTSCEEEEEEEEC
T ss_pred cCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEE-CCCCCEEEEeecCceEEEEEEeec
Confidence 011234556 888999999999999999987653
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-37 Score=307.78 Aligned_cols=255 Identities=15% Similarity=0.258 Sum_probs=223.5
Q ss_pred CcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCc
Q 009569 261 PSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEA 340 (532)
Q Consensus 261 ~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~ 340 (532)
+.+....+.+|.+.|++++|+|++++|++|+.||+|++||+.++. ....+..|...|.+++|+|++++|++|+.|+.
T Consensus 44 ~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~ 120 (340)
T 1got_B 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN---KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC---EEEEEECSSSCEEEEEECTTSSEEEEEETTCE
T ss_pred cchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC---cceEeecCCccEEEEEECCCCCEEEEEeCCCe
Confidence 456778899999999999999999999999999999999998763 45677889999999999999999999999999
Q ss_pred EEEEECCCC----cEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEE
Q 009569 341 IRRWDVNSG----ECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRI 416 (532)
Q Consensus 341 i~iwd~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 416 (532)
|++|++.++ .....+.+|...|.++.|++++. +++++.|+.|++||++++........|...|.+++|+|+++++
T Consensus 121 v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 199 (340)
T 1got_B 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199 (340)
T ss_dssp EEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEE
Confidence 999999875 35567788999999999998764 8999999999999999887766666677799999999999999
Q ss_pred EEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEcc
Q 009569 417 ISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCF 494 (532)
Q Consensus 417 ~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~ 494 (532)
++++.|+.|++||++++. ..+..|...|++++|+|++++|++++.||.|++||+++. +.+..+..+.....+..++|
T Consensus 200 ~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~~~~~~~v~~~~~ 278 (340)
T 1got_B 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD-QELMTYSHDNIICGITSVSF 278 (340)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCTTCCSCEEEEEE
T ss_pred EEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC-cEEEEEccCCcccceEEEEE
Confidence 999999999999999877 566789999999999999999999999999999999987 66666653332222445666
Q ss_pred CCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 495 GGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 495 ~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
+|++++|++|+.||.|++||+.++..
T Consensus 279 -s~~g~~l~~g~~d~~i~vwd~~~~~~ 304 (340)
T 1got_B 279 -SKSGRLLLAGYDDFNCNVWDALKADR 304 (340)
T ss_dssp -CTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred -CCCCCEEEEECCCCeEEEEEcccCcE
Confidence 99999999999999999999987654
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.1e-38 Score=305.72 Aligned_cols=257 Identities=24% Similarity=0.436 Sum_probs=228.2
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcE
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAI 341 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i 341 (532)
......+.+|.+.|++++|+|++++|++|+.||.|++|+..++ .....+.+|...|.+++|+|++++|++++.|+.|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc---ccchhhccCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 3556778999999999999999999999999999999999866 3556788999999999999999999999999999
Q ss_pred EEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC
Q 009569 342 RRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR 421 (532)
Q Consensus 342 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 421 (532)
++||+.+++++..+..|...|.+++|+|+++++++|+.|+.|++||++++........+...|.+++|+|+++++++++.
T Consensus 90 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999987666666666668999999999999999999
Q ss_pred CCeEEEEECCCCc--eee-eecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCC
Q 009569 422 EAAILLLDREANF--ERW-IEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFE 498 (532)
Q Consensus 422 dg~I~iwd~~~~~--~~~-~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d 498 (532)
|+.|++||+++.. ..+ ..+...+.+++|+|++++|++++.||.|++||+.++ +.+..+.+|......+...+..++
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 248 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTG 248 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT-EEEEEECSSCCSSSCCCEEEECSS
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC-cEEEEEEecCCceEEEEEEEEeCC
Confidence 9999999999877 222 345678999999999999999999999999999988 888899888775544444454678
Q ss_pred CcEEEEEeCCCcEEEEeCCCCCce
Q 009569 499 QAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 499 ~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
+.+|++|+.||.|++||+.++...
T Consensus 249 ~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 249 GKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp SCEEEECCTTSCEEEEETTTCCEE
T ss_pred CcEEEEECCCCEEEEEECCCchhh
Confidence 999999999999999999987643
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9e-38 Score=309.10 Aligned_cols=246 Identities=14% Similarity=0.127 Sum_probs=207.4
Q ss_pred ccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEE-EEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECC
Q 009569 269 EAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSL-KHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVN 347 (532)
Q Consensus 269 ~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~-~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 347 (532)
..|...|++++|+|++ .|++|+.||+|+|||+.++..... .....+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 3467889999999986 688999999999999997765433 34566899999999999999999999999999999999
Q ss_pred CCcEEEEeeccCCceEEEEEeeCCC-eEEEEeCCCcEEEEECCCCeEEEee--cCccCceEEEEEeeC-CCEEEEEECCC
Q 009569 348 SGECLHVYEKTGVGLISCGWFLDGG-GIFAGMTDKSICLWDLDGRELESWK--GQKTLRISDMAITDD-GKRIISICREA 423 (532)
Q Consensus 348 ~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~s~~-~~~l~~~~~dg 423 (532)
+++++..+.+|...|.+++|+|++. .+++|+.|++|++||+++.+..... ..+...+.+++|+|+ ++++++|+.|+
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 9999999999999999999999875 6789999999999999875543332 233346899999995 56889999999
Q ss_pred eEEEEECCCCc--eeeeecCCceeEEEEcCCC-CEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCc
Q 009569 424 AILLLDREANF--ERWIEEEEVITSFSLSKDN-KYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQA 500 (532)
Q Consensus 424 ~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~ 500 (532)
.|++||+++++ ..+..|...|++++|+|++ ++|++|+.|++|+|||+.++ + +..+.+|...+.. ++| +|++.
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~-~-~~~~~~H~~~V~~--v~~-sp~~~ 312 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS-E-LFRSQAHRDFVRD--ATW-SPLNH 312 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-E-EEEECCCSSCEEE--EEE-CSSST
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-c-EEEEcCCCCCEEE--EEE-eCCCC
Confidence 99999999887 6777899999999999998 58999999999999999887 4 4567899888544 666 88875
Q ss_pred -EEEEEeCCCcEEEEeCCCCC
Q 009569 501 -FIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 501 -~l~sgs~dg~i~iw~~~~~~ 520 (532)
+|++|+.||+|++|++.+..
T Consensus 313 ~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 313 SLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp TEEEEEETTSCEEEEECCC--
T ss_pred eEEEEEcCCCeEEEEECCCCC
Confidence 67799999999999998754
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2e-37 Score=308.30 Aligned_cols=251 Identities=20% Similarity=0.291 Sum_probs=219.0
Q ss_pred CcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeE--------------------------------
Q 009569 261 PSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVS-------------------------------- 308 (532)
Q Consensus 261 ~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~-------------------------------- 308 (532)
..+....+++|.+.|++++|+|++++||+|+.||+|++||..++....
T Consensus 53 ~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 53 VMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp CCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred ccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence 346778899999999999999999999999999999999976443211
Q ss_pred -------------EEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEee--CCCe
Q 009569 309 -------------LKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFL--DGGG 373 (532)
Q Consensus 309 -------------~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~--~~~~ 373 (532)
....+.+|...|.+++|+|++..|++++.|++|++||+++++++..+.+|...|.+++|+| ++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 1123456888999999999999999999999999999999999999999999999999987 5789
Q ss_pred EEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeeee---cCCceeEEEE
Q 009569 374 IFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWIE---EEEVITSFSL 449 (532)
Q Consensus 374 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~---~~~~i~~~~~ 449 (532)
|++|+.||.|++||++++........|...|.+++|+|++.++++++.|++|++||+++.. ..... +...+++++|
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 9999999999999999877666666666799999999999999999999999999999876 22222 2346899999
Q ss_pred cCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEe
Q 009569 450 SKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFL 515 (532)
Q Consensus 450 sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~ 515 (532)
+|++++|++|+.|+.|++||+.++ ..+..+.+|...+.. +.| +|++++|++|+.||.|++|+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~-~~~~~l~~h~~~v~~--l~~-spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKG-SRVSILFGHENRVST--LRV-SPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTC-SEEEEECCCSSCEEE--EEE-CTTSSCEEEEETTSEEEEEC
T ss_pred eCCCCEEEEEECCCcEEEEECCCC-ceEEEEECCCCcEEE--EEE-CCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999888 788899999988554 556 99999999999999999996
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.9e-37 Score=302.67 Aligned_cols=274 Identities=16% Similarity=0.273 Sum_probs=223.6
Q ss_pred ccccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeec
Q 009569 236 SCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSG 315 (532)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~ 315 (532)
..+++++.|+.+.+|+............+...+.+|...|++++|+|++.++++|+.|++|++||+.++ .....+.+
T Consensus 40 ~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~---~~~~~~~~ 116 (343)
T 2xzm_R 40 PVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTG---TTYKRFVG 116 (343)
T ss_dssp CEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSS---CEEEEEEC
T ss_pred CEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC---cEEEEEcC
Confidence 356778888999999865433222334567789999999999999999999999999999999999876 35577889
Q ss_pred CCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEee---ccCCceEEEEEeeCC----------CeEEEEeCCCc
Q 009569 316 HRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYE---KTGVGLISCGWFLDG----------GGIFAGMTDKS 382 (532)
Q Consensus 316 h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~i~~~~~~~~~----------~~l~~~~~dg~ 382 (532)
|...|.+++|+|++++|++++.|++|++||+.. ....... .|...|.+++|+|++ .++++++.|+.
T Consensus 117 h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 195 (343)
T 2xzm_R 117 HQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGR 195 (343)
T ss_dssp CCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSE
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCE
Confidence 999999999999999999999999999999974 3443333 678889999999987 78999999999
Q ss_pred EEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEe
Q 009569 383 ICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNL 460 (532)
Q Consensus 383 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~ 460 (532)
|++||........+.. |...|.+++|+|++++|++++.|+.|++||+.... .....+...|.+++|+|++.+++++
T Consensus 196 i~iwd~~~~~~~~~~~-h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~- 273 (343)
T 2xzm_R 196 LKVWNTNFQIRYTFKA-HESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG- 273 (343)
T ss_dssp EEEEETTTEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-
T ss_pred EEEEcCCCceeEEEcC-ccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-
Confidence 9999966554444444 44589999999999999999999999999995443 3444566789999999999888765
Q ss_pred cCCeEEEEecCCCCccee--EEe-----------ccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 461 INQEIHLWSIESDPKLVS--RYK-----------GHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 461 ~dg~i~iwd~~~~~~~~~--~~~-----------~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
.|+.|++||+.+. +... .+. +|... +..++| +|++++|++|+.||.|++|++.++
T Consensus 274 ~d~~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~-sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 274 TDQGVKIFNLMTQ-SKAPVCTIEAEPITKAEGQKGKNPQ--CTSLAW-NALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp ESSCEEEEESSSC-CSCSEEECCCCSGGGBTTBCCSCCC--EEEEEE-CSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CCCCEEEEEeCCC-CCCceEEeecCcchhhhhhcCCCCc--eEEEEE-CCCCCeEEEecCCceEEEEEEEcc
Confidence 5888999999876 3333 333 45554 344667 999999999999999999998764
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-37 Score=302.88 Aligned_cols=255 Identities=21% Similarity=0.345 Sum_probs=215.7
Q ss_pred cceeEEcccccc-cEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCc
Q 009569 262 SQTLQILEAHSD-EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEA 340 (532)
Q Consensus 262 ~~~~~~l~~h~~-~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~ 340 (532)
..++..+.+|.+ .|++++|+|+|++||+|+.|++|+|||+.++..........+|...|.+++|+|++++|++|+.|++
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 356788899988 9999999999999999999999999999865322222334689999999999999999999999999
Q ss_pred EEEEECCCC--cEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCC---eEEEeecCccCceEEEEEeeCCCE
Q 009569 341 IRRWDVNSG--ECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGR---ELESWKGQKTLRISDMAITDDGKR 415 (532)
Q Consensus 341 i~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~ 415 (532)
|++||+.++ +++..+.+|...|.+++|+|++++|++|+.|+.|++||+++. ........+...|.+++|+|++++
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 999999876 457788899999999999999999999999999999999753 233444556668999999999999
Q ss_pred EEEEECCCeEEEEECCCCc----eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCC--------------cce
Q 009569 416 IISICREAAILLLDREANF----ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDP--------------KLV 477 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~~~----~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~--------------~~~ 477 (532)
|++++.|+.|++||.++.. ..+.+|...|++++|+|++++|++++.|+.|++||..... .++
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 9999999999999998764 4566789999999999999999999999999999974321 223
Q ss_pred eEEec-cccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 478 SRYKG-HKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 478 ~~~~~-~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
..+.+ |...++ .+.| ++++..|++++.|+.|++|+...+
T Consensus 245 ~~~~~~h~~~v~--~v~~-~~~~~~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 245 CTLSGFHSRTIY--DIAW-CQLTGALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp EEECSSCSSCEE--EEEE-CTTTCCEEEEETTSCEEEEEECTT
T ss_pred EEecCCCCCcEE--EEEE-ecCCCEEEEEeCCCeEEEEEeCCC
Confidence 34444 555544 3566 899999999999999999998764
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.6e-37 Score=307.23 Aligned_cols=252 Identities=19% Similarity=0.312 Sum_probs=202.9
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCC-----------
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDH----------- 330 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~----------- 330 (532)
..+..++++|.+.|++++|+|++++|++|+.||+|+|||+.++ .....+..|...|.+++|+|+++
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~---~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS---QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT---EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCC
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcE
Confidence 4677889999999999999999999999999999999998765 33445555655555555555544
Q ss_pred ---------------------------------------EEEEeeCCCcEEEEECCCCcEEEEe-----eccCCceEEEE
Q 009569 331 ---------------------------------------QLLTCGQEEAIRRWDVNSGECLHVY-----EKTGVGLISCG 366 (532)
Q Consensus 331 ---------------------------------------~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~~~~i~~~~ 366 (532)
.|++|+.|++|++||+.+++++..+ .+|...|.+++
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 4556666667777777777776666 56788899999
Q ss_pred Eee-CCCeEEEEeCCCcEEEEECC-CCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-e-eeeec--
Q 009569 367 WFL-DGGGIFAGMTDKSICLWDLD-GRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-E-RWIEE-- 440 (532)
Q Consensus 367 ~~~-~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~-~~~~~-- 440 (532)
|++ +++++++|+.|+.|++||++ +.........|...|.+++|+|++++|++++.|++|++||++++. . .+..+
T Consensus 213 ~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~ 292 (380)
T 3iz6_a 213 INSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPD 292 (380)
T ss_dssp ECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCS
T ss_pred eecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccc
Confidence 987 88999999999999999997 334334444555699999999999999999999999999999887 2 22221
Q ss_pred -----CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEE----eccccceEEEEEccCCCCCcEEEEEeCCCcE
Q 009569 441 -----EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRY----KGHKRARFVIRSCFGGFEQAFIASGSEDSQV 511 (532)
Q Consensus 441 -----~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i 511 (532)
...|++++|+|+|++|++|+.||.|++||+..+ +.+..+ .+|...+.. ++| +|++.+|++|+.||.|
T Consensus 293 ~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~-~~~~~~~~~~~~h~~~v~~--l~~-s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 293 RNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA-EMVLNLGTLQNSHEGRISC--LGL-SSDGSALCTGSWDKNL 368 (380)
T ss_dssp SSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC-CEEEEECCSCSSCCCCCCE--EEE-CSSSSEEEEECTTSCE
T ss_pred ccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC-ceEEEEecccCCCCCceEE--EEE-CCCCCEEEEeeCCCCE
Confidence 234899999999999999999999999999887 666666 577777544 555 9999999999999999
Q ss_pred EEEeCCCCC
Q 009569 512 NIFLSFSPF 520 (532)
Q Consensus 512 ~iw~~~~~~ 520 (532)
++|++....
T Consensus 369 ~iW~~~~~~ 377 (380)
T 3iz6_a 369 KIWAFSGHR 377 (380)
T ss_dssp EEEECCSSS
T ss_pred EEEecCCCc
Confidence 999998753
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5e-36 Score=302.68 Aligned_cols=241 Identities=21% Similarity=0.402 Sum_probs=210.3
Q ss_pred ccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEE
Q 009569 273 DEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECL 352 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 352 (532)
..|++++|+|+|++||+|+.|++|++||+.++ +....+.+|...|.+++|+|++.+|++++.|++|++||++++++.
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENR---KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCC---cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE
Confidence 35999999999999999999999999999865 566778999999999999999999999999999999999999988
Q ss_pred EEeeccCCceEEEEEee-CCCeEEEEeCCCcEEEEECCCCeEEEee-------cCccCceEEEEEeeCCCEEEEEECCCe
Q 009569 353 HVYEKTGVGLISCGWFL-DGGGIFAGMTDKSICLWDLDGRELESWK-------GQKTLRISDMAITDDGKRIISICREAA 424 (532)
Q Consensus 353 ~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~l~~~~~dg~ 424 (532)
..+. +...+.+++|+| +++++++|+.|+.|++||++++...... ..|...|.+++|+|++++|++++.|+.
T Consensus 201 ~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 201 LTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 8776 456799999999 8999999999999999999876554333 345568999999999999999999999
Q ss_pred EEEEECCCCc--------------eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEE
Q 009569 425 ILLLDREANF--------------ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVI 490 (532)
Q Consensus 425 I~iwd~~~~~--------------~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i 490 (532)
|++||+++.. ..+.+|...|.+++|+|++++|++|+.|+.|++||+.++ +.+..+.+|...+..+
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~-~~~~~l~~h~~~v~~v 358 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG-NPLLMLQGHRNSVISV 358 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC-eEEEEECCCCCCEEEE
Confidence 9999997632 345678899999999999999999999999999999988 8889999999987665
Q ss_pred EEcc---CCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 491 RSCF---GGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 491 ~~~~---~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
.+.. ++|++.+|++|+.||+|++|++..
T Consensus 359 ~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 359 AVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 5432 256899999999999999999864
No 16
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.5e-36 Score=292.83 Aligned_cols=267 Identities=9% Similarity=0.150 Sum_probs=226.2
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.+++++.++.+.+|+-.+ ...+..+..|..+|.+++|+|++++|++|+.|++|++||+.++ .....+.+|
T Consensus 27 ~l~s~~~dg~v~lWd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~---~~~~~~~~h 96 (304)
T 2ynn_A 27 WVLTTLYSGRVELWNYET-------QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG---EKVVDFEAH 96 (304)
T ss_dssp EEEEEETTSEEEEEETTT-------TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC---CEEEEEECC
T ss_pred EEEEEcCCCcEEEEECCC-------CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC---cEEEEEeCC
Confidence 345566677788886543 4667889999999999999999999999999999999999876 355778899
Q ss_pred CCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCC-cEEEEeeccCCceEEEEEee-CCCeEEEEeCCCcEEEEECCCC-eE
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSG-ECLHVYEKTGVGLISCGWFL-DGGGIFAGMTDKSICLWDLDGR-EL 393 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-~~ 393 (532)
...|.+++|+|++.+|++|+.|++|++||++++ .....+.+|...|.+++|+| ++..+++|+.|++|++||++.. ..
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc
Confidence 999999999999999999999999999999887 45577889999999999999 6789999999999999999753 33
Q ss_pred EEeecCccCceEEEEEee--CCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEe
Q 009569 394 ESWKGQKTLRISDMAITD--DGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWS 469 (532)
Q Consensus 394 ~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd 469 (532)
......+...+..+.|+| ++.++++++.|+.|++||++++. ..+.+|...|.+++|+|++++|++|+.||.|++||
T Consensus 177 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd 256 (304)
T 2ynn_A 177 FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256 (304)
T ss_dssp EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 344445555799999987 67899999999999999999887 66778999999999999999999999999999999
Q ss_pred cCCCCcceeEEeccccceEEEEEccCCCCCc--EEEEEeCCCcEEEEeCCC
Q 009569 470 IESDPKLVSRYKGHKRARFVIRSCFGGFEQA--FIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~--~l~sgs~dg~i~iw~~~~ 518 (532)
+.+. +.+.++..|...++. ++| +|++. ++++|+.|| +.+|++..
T Consensus 257 ~~~~-~~~~~~~~~~~~~~~--~~~-~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 257 SSTY-KVEKTLNVGLERSWC--IAT-HPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp TTTC-CEEEEECCSSSSEEE--EEE-CTTCGGGCEEEEETTE-EEEEECC-
T ss_pred CCCC-ceeeeccCCCccEEE--EEE-CCCCCceEEEEecCCc-eEEEEecc
Confidence 9998 889999988887554 455 55553 577776555 77887765
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2e-35 Score=292.65 Aligned_cols=255 Identities=19% Similarity=0.280 Sum_probs=216.2
Q ss_pred cceeEEcccccccEEEEEE-----cc-CCCEEEEEeCCCeEEEEEeecCC----eeEEEEEeecCCCCeEEEEeCCCCCE
Q 009569 262 SQTLQILEAHSDEVWFLQF-----SH-DGKYLASSSKDQSAIIWEVKEDG----QVSLKHRLSGHRKPVFTVSWSPNDHQ 331 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~-----s~-~g~~las~s~dg~i~iwd~~~~~----~~~~~~~~~~h~~~v~~l~~s~~~~~ 331 (532)
..+...+++|.+.|++++| ++ ++++||+|+.|++|++||+.... .......+.+|...|.+++|+|++.+
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 3567789999999999999 77 99999999999999999997532 12456778999999999999999999
Q ss_pred EEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEee--cCccCceEEEEE
Q 009569 332 LLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWK--GQKTLRISDMAI 409 (532)
Q Consensus 332 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~ 409 (532)
+++++.|++|++||+++++++..+.+|...|.+++|+|+++++++++.|+.|++||+.+....... ..+...|.+++|
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeee
Confidence 999999999999999999999999999999999999999999999999999999999865554433 245558999999
Q ss_pred eeCC----------CEEEEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCccee
Q 009569 410 TDDG----------KRIISICREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVS 478 (532)
Q Consensus 410 s~~~----------~~l~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~ 478 (532)
+|++ .++++++.|+.|++||..... ..+..|...|.+++|+|++++|++|+.||.|++||+........
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence 9987 789999999999999955443 56678999999999999999999999999999999965434555
Q ss_pred EEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 479 RYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 479 ~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
.+. +... +..++| +|++.+++++ .|+.|++|++.++..
T Consensus 251 ~~~-~~~~--v~~v~~-sp~~~~la~~-~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 251 EFD-AGST--INQIAF-NPKLQWVAVG-TDQGVKIFNLMTQSK 288 (343)
T ss_dssp EEE-CSSC--EEEEEE-CSSSCEEEEE-ESSCEEEEESSSCCS
T ss_pred eec-CCCc--EEEEEE-CCCCCEEEEE-CCCCEEEEEeCCCCC
Confidence 553 2333 345666 9999887654 688899999987653
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.6e-36 Score=319.29 Aligned_cols=270 Identities=16% Similarity=0.271 Sum_probs=224.4
Q ss_pred ccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEee---
Q 009569 238 LFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS--- 314 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~--- 314 (532)
+++++.|+.+.+|+.. +.++...+.+|.+.|++++|+|+|++||+|+.|++|++||+.++. ....+.
T Consensus 163 l~s~s~D~~v~lwd~~-------~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~---~~~~~~~~~ 232 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGP-------PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT---KTGVFEDDS 232 (611)
T ss_dssp EEEEETTSCEEEEETT-------TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---EEEECBCTT
T ss_pred EEEEeCCCeEEEEECC-------CCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc---Eeeeecccc
Confidence 5566777788888633 356778899999999999999999999999999999999998763 344553
Q ss_pred ----cCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEE------------------------------------
Q 009569 315 ----GHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHV------------------------------------ 354 (532)
Q Consensus 315 ----~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------------------------------ 354 (532)
+|...|.+++|+|++++|++++.|++|++||+.+++++..
T Consensus 233 ~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~ 312 (611)
T 1nr0_A 233 LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 312 (611)
T ss_dssp SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred ccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCC
Confidence 7999999999999999999999999999999998776543
Q ss_pred -------eeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEee-c----------------------------
Q 009569 355 -------YEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWK-G---------------------------- 398 (532)
Q Consensus 355 -------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~---------------------------- 398 (532)
+.+|...|.+++|+|++++|++++.|+.|++||+.++...... .
T Consensus 313 ~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~ 392 (611)
T 1nr0_A 313 LGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKV 392 (611)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred CCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEE
Confidence 3467888999999999999999999999999998754332111 0
Q ss_pred -----------------------------------------------------CccCceEEEEEeeCCCEEEEEECCCeE
Q 009569 399 -----------------------------------------------------QKTLRISDMAITDDGKRIISICREAAI 425 (532)
Q Consensus 399 -----------------------------------------------------~~~~~v~~~~~s~~~~~l~~~~~dg~I 425 (532)
.+...+.+++|+|||+++++++.|+.|
T Consensus 393 w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v 472 (611)
T 1nr0_A 393 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKV 472 (611)
T ss_dssp ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred eecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeE
Confidence 011246789999999999999999999
Q ss_pred EEEECCCCc---eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeE--EeccccceEEEEEccCCCCCc
Q 009569 426 LLLDREANF---ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSR--YKGHKRARFVIRSCFGGFEQA 500 (532)
Q Consensus 426 ~iwd~~~~~---~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~i~~~~~s~d~~ 500 (532)
++||+.+.. .....|...|++++|+||+++|++++.|+.|++||+.+..+++.. +.+|...+. .++| +||++
T Consensus 473 ~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~--~v~f-spdg~ 549 (611)
T 1nr0_A 473 HVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA--CVSW-SPDNV 549 (611)
T ss_dssp EEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEE--EEEE-CTTSS
T ss_pred EEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeeccccee--EEEE-CCCCC
Confidence 999998764 233678999999999999999999999999999999873255443 344877744 4666 99999
Q ss_pred EEEEEeCCCcEEEEeCCCCC
Q 009569 501 FIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 501 ~l~sgs~dg~i~iw~~~~~~ 520 (532)
+|++|+.|++|++|++.++.
T Consensus 550 ~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 550 RLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp EEEEEETTSCEEEEETTCTT
T ss_pred EEEEEECCCcEEEEECCCcc
Confidence 99999999999999998865
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.9e-36 Score=291.48 Aligned_cols=250 Identities=14% Similarity=0.277 Sum_probs=207.9
Q ss_pred eEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCC--CCEEEEeeCCCcEE
Q 009569 265 LQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPN--DHQLLTCGQEEAIR 342 (532)
Q Consensus 265 ~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~--~~~l~s~~~dg~i~ 342 (532)
+..+.+|.+.|++++|+|+|++||+|+.|++|+|||+..+ .......+.+|..+|.+++|+|+ +++|++|+.|++|+
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~-~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS-CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC-CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 3467899999999999999999999999999999999743 22456788999999999999874 89999999999999
Q ss_pred EEECCCCc--EEEEeeccCCceEEEEEeeC--CCeEEEEeCCCcEEEEECCCCe-E-EEeecCccCceEEEEEeeC----
Q 009569 343 RWDVNSGE--CLHVYEKTGVGLISCGWFLD--GGGIFAGMTDKSICLWDLDGRE-L-ESWKGQKTLRISDMAITDD---- 412 (532)
Q Consensus 343 iwd~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~-~-~~~~~~~~~~v~~~~~s~~---- 412 (532)
+||+.+++ .+..+..|...|.+++|+|+ +.+|++|+.|+.|++||+++.. . ......|...|.+++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99998874 55677789999999999997 8899999999999999997542 1 2223345558999999997
Q ss_pred ---------CCEEEEEECCCeEEEEECCCCc------eeeeecCCceeEEEEcCCC---CEEEEEecCCeEEEEecCCCC
Q 009569 413 ---------GKRIISICREAAILLLDREANF------ERWIEEEEVITSFSLSKDN---KYLLVNLINQEIHLWSIESDP 474 (532)
Q Consensus 413 ---------~~~l~~~~~dg~I~iwd~~~~~------~~~~~~~~~i~~~~~sp~~---~~l~~~~~dg~i~iwd~~~~~ 474 (532)
+++|++++.|+.|++||+++.. ..+.+|...|.+++|+|++ .+|++++.|++|++||+.+..
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 5799999999999999998754 3455789999999999984 899999999999999998742
Q ss_pred c--ceeEE--eccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 475 K--LVSRY--KGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 475 ~--~~~~~--~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
. ....+ ..|... +..+.| +|++++|++++.||.|++|+...
T Consensus 241 ~~~~~~~~~~~~~~~~--v~~~~~-s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 241 GPWKKTLLKEEKFPDV--LWRASW-SLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SCCEEEESSSSCCSSC--EEEEEE-CSSSCCEEEEETTSCEEEEEECT
T ss_pred CccceeeeecccCCCc--EEEEEE-CCCCCEEEEEcCCCcEEEEEECC
Confidence 1 11222 345555 344667 99999999999999999999874
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.3e-36 Score=296.00 Aligned_cols=276 Identities=17% Similarity=0.271 Sum_probs=220.8
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.+++++.|+.+.+|+...... ........+|.+.|++++|+|+|++||+|+.|++|++|++..+ .......+.+|
T Consensus 30 ~las~~~D~~i~iw~~~~~~~----~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~-~~~~~~~~~~h 104 (345)
T 3fm0_A 30 LLASCGGDRRIRIWGTEGDSW----ICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD-DFECVTTLEGH 104 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEE----EEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC--EEEEEEECCC
T ss_pred EEEEEcCCCeEEEEEcCCCcc----eeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCC-CeEEEEEccCC
Confidence 344566777788886432100 0112234789999999999999999999999999999999854 34567788999
Q ss_pred CCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCc---EEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeE
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGE---CLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGREL 393 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 393 (532)
...|.+++|+|++++|++|+.|++|++||+.++. ++..+..|...|.+++|+|++++|++|+.|+.|++||.++...
T Consensus 105 ~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~ 184 (345)
T 3fm0_A 105 ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW 184 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE
T ss_pred CCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE
Confidence 9999999999999999999999999999998763 4667788999999999999999999999999999999987642
Q ss_pred --EEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-----------------eeee-ecCCceeEEEEcCCC
Q 009569 394 --ESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-----------------ERWI-EEEEVITSFSLSKDN 453 (532)
Q Consensus 394 --~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-----------------~~~~-~~~~~i~~~~~sp~~ 453 (532)
......|...|.+++|+|++++|++++.|++|++||..... ..+. .|...|.+++|+|++
T Consensus 185 ~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~ 264 (345)
T 3fm0_A 185 VCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT 264 (345)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT
T ss_pred EEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC
Confidence 23344556699999999999999999999999999964321 0111 277889999999999
Q ss_pred CEEEEEecCCeEEEEecCCCCc---ce-----eEEeccccceEEEEEccCCCCC-cEEEEEeCCCcEEEEeCCCCC
Q 009569 454 KYLLVNLINQEIHLWSIESDPK---LV-----SRYKGHKRARFVIRSCFGGFEQ-AFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 454 ~~l~~~~~dg~i~iwd~~~~~~---~~-----~~~~~~~~~~~~i~~~~~s~d~-~~l~sgs~dg~i~iw~~~~~~ 520 (532)
..|++++.|+.|++|+...... .. ....+|...+.. +.| +|++ .+|++|+.||.|++|++.+++
T Consensus 265 ~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~--v~~-~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 265 GALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNC--VAW-NPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp CCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEE--EEE-CSSSTTEEEEEETTSCEEEEEECC--
T ss_pred CEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeE--eEE-eCCCceEEEEcCCCCcEEEEEecCCC
Confidence 9999999999999999875421 11 123467776444 566 8887 599999999999999998865
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-35 Score=289.69 Aligned_cols=267 Identities=18% Similarity=0.341 Sum_probs=229.0
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.+++++.++.+.+|+... .+....+.+|...|.+++|+|++++|++|+.|+.|++||+.++ .....+.+|
T Consensus 37 ~l~s~~~dg~i~iw~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~---~~~~~~~~~ 106 (312)
T 4ery_A 37 WLASSSADKLIKIWGAYD-------GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG---KCLKTLKGH 106 (312)
T ss_dssp EEEEEETTSCEEEEETTT-------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---CEEEEEECC
T ss_pred EEEEeeCCCeEEEEeCCC-------cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC---cEEEEEcCC
Confidence 345666777888886432 4667788999999999999999999999999999999999876 456778899
Q ss_pred CCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeE-EE
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGREL-ES 395 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~ 395 (532)
...|.+++|+|++++|++|+.|+.|++||+++++++..+..|...|.+++|+|+++++++++.||.|++||++++.. ..
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 186 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 186 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987554 44
Q ss_pred eecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCce---eEEEEcCCCCEEEEEecCCeEEEEec
Q 009569 396 WKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVI---TSFSLSKDNKYLLVNLINQEIHLWSI 470 (532)
Q Consensus 396 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i---~~~~~sp~~~~l~~~~~dg~i~iwd~ 470 (532)
+...+...+..++|+|+++++++++.|+.|++||+++.. ..+..|...+ ......+++.+|++|+.||.|++||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 187 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp ECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence 445555589999999999999999999999999999887 3444454432 23334467899999999999999999
Q ss_pred CCCCcceeEEeccccceEEEEEccCCCCCcEEEEEe--CCCcEEEEeCC
Q 009569 471 ESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGS--EDSQVNIFLSF 517 (532)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs--~dg~i~iw~~~ 517 (532)
.++ +.+..+.+|...+. .+.| +|++.++++++ .|+.|++|+.+
T Consensus 267 ~~~-~~~~~~~~h~~~v~--~~~~-~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 267 QTK-EIVQKLQGHTDVVI--STAC-HPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TTC-CEEEEECCCSSCEE--EEEE-CSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCc-hhhhhhhccCCcEE--EEee-cCcCCceEEEEccCCccEEEecCC
Confidence 988 88999999988744 4566 99999999987 69999999864
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-36 Score=294.31 Aligned_cols=273 Identities=16% Similarity=0.223 Sum_probs=210.8
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEc-cc-ccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCC----eeEEE
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQIL-EA-HSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDG----QVSLK 310 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~-h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~----~~~~~ 310 (532)
.+++++.++.+.+|+.... .......+ .+ |.+.|++++|+|++++||+|+.|++|++|++.... .....
T Consensus 26 ~las~~~D~~i~lw~~~~~-----~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~ 100 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYD-----DFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLL 100 (330)
T ss_dssp EEEEEESSSCEEEEECSSS-----CCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEE
T ss_pred EEEEEcCCCEEEEEEecCC-----CeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeE
Confidence 4556777888888875431 12344455 44 99999999999999999999999999999985321 23466
Q ss_pred EEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCC----CcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEE
Q 009569 311 HRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNS----GECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLW 386 (532)
Q Consensus 311 ~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw 386 (532)
..+.+|...|.+++|+|++++|++|+.|++|++||+.. .+++..+..|...|.+++|+|++.+|++|+.|++|++|
T Consensus 101 ~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW 180 (330)
T 2hes_X 101 AIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIW 180 (330)
T ss_dssp EEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred EEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence 77889999999999999999999999999999999943 25677888999999999999999999999999999999
Q ss_pred ECCCC--eEEEeecCccCceEEEEEeeC--CCEEEEEECCCeEEEEECCCCc----------eeee-ecCCceeEEEEcC
Q 009569 387 DLDGR--ELESWKGQKTLRISDMAITDD--GKRIISICREAAILLLDREANF----------ERWI-EEEEVITSFSLSK 451 (532)
Q Consensus 387 d~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~I~iwd~~~~~----------~~~~-~~~~~i~~~~~sp 451 (532)
|..+. ........|...|.+++|+|+ +..+++++.|++|++||+.+.. ..+. .|...|.+++|++
T Consensus 181 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~ 260 (330)
T 2hes_X 181 KDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF 260 (330)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT
T ss_pred ECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcC
Confidence 98764 344444556669999999998 7789999999999999987541 1122 2788999999997
Q ss_pred CCCEEEEEecCCeEEEEecCCCC-ccee-EEecccc-ceEEEEEccCCC--CCcEEEEEeCCCcEEEEeCCC
Q 009569 452 DNKYLLVNLINQEIHLWSIESDP-KLVS-RYKGHKR-ARFVIRSCFGGF--EQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 452 ~~~~l~~~~~dg~i~iwd~~~~~-~~~~-~~~~~~~-~~~~i~~~~~s~--d~~~l~sgs~dg~i~iw~~~~ 518 (532)
++ +|++++.||.|++||..++. +.+. .+.+|.. .+.. +.| +| ++.+|++|+.||.|++|+++.
T Consensus 261 ~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~--v~~-~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 261 NG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINV--VKW-LELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEE--EEE-C-----CCEEEEETTSEEEEEEC--
T ss_pred CC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEE--EEE-ecCCCceEEEEecCCCcEEEEEecc
Confidence 65 88999999999999997652 1222 2356665 5443 455 67 789999999999999999875
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.6e-36 Score=320.47 Aligned_cols=254 Identities=16% Similarity=0.244 Sum_probs=217.3
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC---
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE--- 338 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d--- 338 (532)
.+....+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++.. .....+.+|.++|.+++|+|++++|++++.+
T Consensus 49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~-~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~ 127 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH-ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 127 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC-CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSC
T ss_pred cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcc-eeeEeecccCCceEEEEECCCCCEEEEEECCCCc
Confidence 456778899999999999999999999999999999999975433 3456788999999999999999999998875
Q ss_pred -CcEEEEECCCCcEEEEeeccCCceEEEEEeeCCC-eEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEE
Q 009569 339 -EAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGG-GIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRI 416 (532)
Q Consensus 339 -g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 416 (532)
+.|++|| +++....+.+|...|.+++|+|++. .+++|+.|++|++||............|...|.+++|+|++++|
T Consensus 128 ~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~l 205 (611)
T 1nr0_A 128 FGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLF 205 (611)
T ss_dssp SEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred eeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEE
Confidence 3677776 5667778899999999999999987 59999999999999998877666666677799999999999999
Q ss_pred EEEECCCeEEEEECCCCc--eeee-------ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCccee---------
Q 009569 417 ISICREAAILLLDREANF--ERWI-------EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVS--------- 478 (532)
Q Consensus 417 ~~~~~dg~I~iwd~~~~~--~~~~-------~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~--------- 478 (532)
++++.|++|++||..++. ..+. .|...|.+++|+|++++|++++.|++|++||+.++ +.+.
T Consensus 206 as~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~-~~~~~~~~~~~~~ 284 (611)
T 1nr0_A 206 ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL-KVEKTIPVGTRIE 284 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEEEECCSSGG
T ss_pred EEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC-ceeeeecCCCCcc
Confidence 999999999999998876 2221 68899999999999999999999999999999876 4433
Q ss_pred ----------------------------------EEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 479 ----------------------------------RYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 479 ----------------------------------~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
.+.+|...+ ..++| +|++++|++++.||.|++||+.++...
T Consensus 285 ~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v--~~l~~-spdg~~l~s~s~D~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 285 DQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAI--TALSS-SADGKTLFSADAEGHINSWDISTGISN 359 (611)
T ss_dssp GCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCE--EEEEE-CTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred ceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCE--EEEEE-eCCCCEEEEEeCCCcEEEEECCCCcee
Confidence 334566653 34566 999999999999999999999987543
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-36 Score=302.39 Aligned_cols=248 Identities=12% Similarity=0.090 Sum_probs=203.3
Q ss_pred EEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeE-EEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEE
Q 009569 266 QILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVS-LKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRW 344 (532)
Q Consensus 266 ~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~-~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iw 344 (532)
....+|...|++++|+|++.+ ++++.||+|+|||+.++.... ......+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 88 ~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp SEEEECSSCEEEEEEETTTEE-EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred cccCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 345579999999999999865 457789999999998654321 123455899999999999999999999999999999
Q ss_pred ECCCCcEEEEeeccCCceEEEEEeeCCC-eEEEEeCCCcEEEEECCCCeEEEee--cCccCceEEEEEeeC-CCEEEEEE
Q 009569 345 DVNSGECLHVYEKTGVGLISCGWFLDGG-GIFAGMTDKSICLWDLDGRELESWK--GQKTLRISDMAITDD-GKRIISIC 420 (532)
Q Consensus 345 d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~s~~-~~~l~~~~ 420 (532)
|+.+++++..+..|...|.+++|+|++. .+++++.|+.|++||+++....... ..+...+.+++|+|+ +.++++++
T Consensus 167 d~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 167 DLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee
Confidence 9999999999999999999999999875 7889999999999999875543322 234447999999997 46889999
Q ss_pred CCCeEEEEECCCCc--eeeeecCCceeEEEEcCCC-CEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCC
Q 009569 421 REAAILLLDREANF--ERWIEEEEVITSFSLSKDN-KYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGF 497 (532)
Q Consensus 421 ~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 497 (532)
.|+.|++||+++.. ..+..|...|++++|+|++ ++|++|+.|+.|+|||+.++ +++.. .+|...+.. ++| +|
T Consensus 247 ~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-~~~~~-~~H~~~V~~--vaf-sP 321 (357)
T 4g56_B 247 ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-EVFRD-LSHRDFVTG--VAW-SP 321 (357)
T ss_dssp SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-EEEEE-CCCSSCEEE--EEE-CS
T ss_pred cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-cEeEE-CCCCCCEEE--EEE-eC
Confidence 99999999999887 6667889999999999987 67899999999999999987 66544 578887544 666 87
Q ss_pred -CCcEEEEEeCCCcEEEEeCCCC
Q 009569 498 -EQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 498 -d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
++.+|++++.||+|++|++.+.
T Consensus 322 ~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 322 LDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SSTTEEEEEETTSCEEEEECC--
T ss_pred CCCCEEEEEcCCCeEEEEECCCC
Confidence 8999999999999999999764
No 25
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.5e-36 Score=293.71 Aligned_cols=248 Identities=18% Similarity=0.284 Sum_probs=204.9
Q ss_pred EcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCC--CCCEEEEeeCCCcEEEE
Q 009569 267 ILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSP--NDHQLLTCGQEEAIRRW 344 (532)
Q Consensus 267 ~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~--~~~~l~s~~~dg~i~iw 344 (532)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++. ......+.+|...|.+++|+| ++++|++|+.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~-~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG-QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE-EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC-cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 467899999999999999999999999999999998653 235677899999999999986 48999999999999999
Q ss_pred ECCCC--cEEEEeeccCCceEEEEEeeC--CCeEEEEeCCCcEEEEECCCCe---EEEeecCccCceEEEEEeeC-----
Q 009569 345 DVNSG--ECLHVYEKTGVGLISCGWFLD--GGGIFAGMTDKSICLWDLDGRE---LESWKGQKTLRISDMAITDD----- 412 (532)
Q Consensus 345 d~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~s~~----- 412 (532)
|++++ .....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+++.. .......|...|.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 99887 466778889999999999997 7899999999999999998642 22334455668999999997
Q ss_pred ------------CCEEEEEECCCeEEEEECCCCc-----eeeeecCCceeEEEEcCCC----CEEEEEecCCeEEEEecC
Q 009569 413 ------------GKRIISICREAAILLLDREANF-----ERWIEEEEVITSFSLSKDN----KYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 413 ------------~~~l~~~~~dg~I~iwd~~~~~-----~~~~~~~~~i~~~~~sp~~----~~l~~~~~dg~i~iwd~~ 471 (532)
+++|++++.|+.|++||++... ..+..|...|.+++|+|++ .+|++++.|++|++||+.
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 4689999999999999997541 4556789999999999986 899999999999999997
Q ss_pred CC---CcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 472 SD---PKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 472 ~~---~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
+. ......+..|...++ .++| +|++++|++++.||.|++|+...
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~--~v~~-sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 247 DASSNTWSPKLLHKFNDVVW--HVSW-SITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp STTCCCCBCCEEEECSSCEE--EEEE-CTTTCCEEEEESSSCEEEEEECT
T ss_pred CccccchhhhhhhcCCCcEE--EEEE-cCCCCEEEEEcCCCeEEEEEECC
Confidence 62 112344566766644 4666 99999999999999999999863
No 26
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.6e-35 Score=295.62 Aligned_cols=244 Identities=23% Similarity=0.422 Sum_probs=208.1
Q ss_pred cccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCC------------------CCeEEEEeCCCCCE
Q 009569 270 AHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHR------------------KPVFTVSWSPNDHQ 331 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~------------------~~v~~l~~s~~~~~ 331 (532)
+|.+.|++++|+|+|++||+|+ ++.+++|++.++.. ...+..|. ..|.+++|+|++++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSL---VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCE---EEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCE---EEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 6999999999999999999986 78999999987643 33343332 34999999999999
Q ss_pred EEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEee
Q 009569 332 LLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITD 411 (532)
Q Consensus 332 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~ 411 (532)
|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++|+.|++|++||++++........+. .+.+++|+|
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-~v~~~~~~~ 216 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED-GVTTVAVSP 216 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS-CEEEEEECS
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCC-CcEEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999877655544443 799999999
Q ss_pred -CCCEEEEEECCCeEEEEECCCCc--eee-------eecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCC--------
Q 009569 412 -DGKRIISICREAAILLLDREANF--ERW-------IEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESD-------- 473 (532)
Q Consensus 412 -~~~~l~~~~~dg~I~iwd~~~~~--~~~-------~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~-------- 473 (532)
+++++++++.|+.|++||++++. ..+ .+|...|.+++|+|++++|++++.|+.|++||+++.
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 89999999999999999998876 222 468889999999999999999999999999999753
Q ss_pred ---CcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 474 ---PKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 474 ---~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
..+...+.+|...+. .++| ++++.+|++|+.||.|++||+.++..
T Consensus 297 ~~~~~~~~~~~~h~~~v~--~~~~-~~~~~~l~sgs~D~~v~iwd~~~~~~ 344 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVL--SVAT-TQNDEYILSGSKDRGVLFWDKKSGNP 344 (393)
T ss_dssp ----CEEEEEECCSSCEE--EEEE-CGGGCEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCcceEEEecccCcEE--EEEE-CCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 134557788887744 4566 89999999999999999999998764
No 27
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-35 Score=287.61 Aligned_cols=252 Identities=19% Similarity=0.281 Sum_probs=205.1
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEe-ec-CCCCeEEEEeCCCCCEEEEeeCCC
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRL-SG-HRKPVFTVSWSPNDHQLLTCGQEE 339 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~-~~-h~~~v~~l~~s~~~~~l~s~~~dg 339 (532)
.+++..+++|.++|++++|+|+ +||+|+.|++|++|++..+. ......+ .+ |...|.+++|+|++++|++|+.|+
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~-~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDD-FTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSC-CEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCC-eEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 3567889999999999999988 99999999999999998542 2344445 34 999999999999999999999999
Q ss_pred cEEEEECCC-------CcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC----CeEEEeecCccCceEEEE
Q 009569 340 AIRRWDVNS-------GECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG----RELESWKGQKTLRISDMA 408 (532)
Q Consensus 340 ~i~iwd~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~ 408 (532)
+|++||+.. .+++..+.+|...|.+++|+|++++|++|+.|++|++||++. .........|...|.+++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 999999853 456778889999999999999999999999999999999942 234444455666899999
Q ss_pred EeeCCCEEEEEECCCeEEEEECCCCc----eeeeecCCceeEEEEcCC--CCEEEEEecCCeEEEEecCCCC-------c
Q 009569 409 ITDDGKRIISICREAAILLLDREANF----ERWIEEEEVITSFSLSKD--NKYLLVNLINQEIHLWSIESDP-------K 475 (532)
Q Consensus 409 ~s~~~~~l~~~~~dg~I~iwd~~~~~----~~~~~~~~~i~~~~~sp~--~~~l~~~~~dg~i~iwd~~~~~-------~ 475 (532)
|+|++.+|++++.|++|++||..+.. ..+.+|...|.+++|+|+ +.+|++++.|+.|++||+.+.. .
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 99999999999999999999987652 456679999999999998 7799999999999999997541 2
Q ss_pred ceeEEec-cccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 476 LVSRYKG-HKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 476 ~~~~~~~-~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
....+.+ |...++. ++| ++++ +|++++.||.|++|+..++.
T Consensus 241 ~~~~~~~~h~~~v~~--v~~-s~~~-~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 241 CEAILPDVHKRQVYN--VAW-GFNG-LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EEEECCSCCSSCEEE--EEE-CTTS-CEEEEETTSCEEEEEEETTE
T ss_pred EeeecccccccceEE--EEE-cCCC-EEEEEeCCCEEEEEEcCCCc
Confidence 2334444 6666444 555 6554 89999999999999988763
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.8e-35 Score=310.32 Aligned_cols=257 Identities=23% Similarity=0.461 Sum_probs=226.2
Q ss_pred ccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCC
Q 009569 240 HNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKP 319 (532)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 319 (532)
+.+.++.+.+|+ .....+..+.+|...|++++|+|+|++|++|+.|+.|++|+.. + .....+.+|...
T Consensus 320 t~~~d~~i~~w~--------~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~---~~~~~~~~~~~~ 387 (577)
T 2ymu_A 320 SASDDKTVKLWN--------RNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-G---QLLQTLTGHSSS 387 (577)
T ss_dssp EEETTSCEEEEE--------TTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-C---CEEEEEECCSSC
T ss_pred EEeCCCeEEEEe--------CCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-C---CEEEEecCCCCC
Confidence 344445555554 4456677889999999999999999999999999999999964 3 356778899999
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecC
Q 009569 320 VFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQ 399 (532)
Q Consensus 320 v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 399 (532)
|.+++|+|++++|++++.|+.|++||. +++.+..+..|...|++++|+|+++++++++.|+.|++||..+..+..+..+
T Consensus 388 v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~ 466 (577)
T 2ymu_A 388 VRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGH 466 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECC
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCC
Confidence 999999999999999999999999995 6788889999999999999999999999999999999999887766666655
Q ss_pred ccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCccee
Q 009569 400 KTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVS 478 (532)
Q Consensus 400 ~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~ 478 (532)
. ..|.+++|+|++++|++++.|+.|++||..... ..+..|...|++++|+|++++|++++.||.|++||. ++ +.+.
T Consensus 467 ~-~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~-~~~~ 543 (577)
T 2ymu_A 467 S-SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG-QLLQ 543 (577)
T ss_dssp S-SCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TS-CEEE
T ss_pred C-CCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CC-CEEE
Confidence 4 489999999999999999999999999976554 677789999999999999999999999999999996 44 7889
Q ss_pred EEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEe
Q 009569 479 RYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFL 515 (532)
Q Consensus 479 ~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~ 515 (532)
++.+|...+.. ++| +||+++|+|++.|++|++||
T Consensus 544 ~~~~h~~~v~~--~~f-s~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 544 TLTGHSSSVWG--VAF-SPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEECCSSCEEE--EEE-CTTSSCEEEEETTSCEEEEC
T ss_pred EEcCCCCCEEE--EEE-cCCCCEEEEEeCCCEEEEeC
Confidence 99999988544 566 99999999999999999997
No 29
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.9e-34 Score=282.82 Aligned_cols=253 Identities=18% Similarity=0.276 Sum_probs=189.0
Q ss_pred ceeEEcccccccEEEEEEccC-CCEEEEEeCCCeEEEEEeecCCe--eEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCC
Q 009569 263 QTLQILEAHSDEVWFLQFSHD-GKYLASSSKDQSAIIWEVKEDGQ--VSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEE 339 (532)
Q Consensus 263 ~~~~~l~~h~~~V~~v~~s~~-g~~las~s~dg~i~iwd~~~~~~--~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg 339 (532)
.+..+|+||.+.|++++|+|+ +++||||+.|++|+|||+.+... ..+...+.+|...|.+++|+|++++|++++.|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 345679999999999999997 68999999999999999985432 245677899999999999999999999999999
Q ss_pred cEEEEECCCCcEEEEeeccCCceEEEEEeeCCCe---------------------------------------------E
Q 009569 340 AIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGG---------------------------------------------I 374 (532)
Q Consensus 340 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------------------------------------------l 374 (532)
.|++|+............+...+..+.+++++.. +
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEE
Confidence 9999999887766555444444444444444444 4
Q ss_pred EEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCC
Q 009569 375 FAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWIEEEEVITSFSLSKDN 453 (532)
Q Consensus 375 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~ 453 (532)
++++.|+.|++||+++.........+...|++++|+|++++|++++.|+.|++||+++.. .....+...+.+++|+|++
T Consensus 189 ~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 268 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 268 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSS
T ss_pred EEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCC
Confidence 455555555555555554444444555678888888888888888888888888888776 4445566678888888876
Q ss_pred CEEEEEecCCeEEEEecCCCCcceeEEe---------ccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 454 KYLLVNLINQEIHLWSIESDPKLVSRYK---------GHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 454 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
.++ +++.|+.|++||+++. ..+..+. +|... +..++| +|++++|++|+.||.|+|||+.+|.
T Consensus 269 ~~~-~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~h~~~--v~~l~~-s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 269 YWL-CAATGPSIKIWDLEGK-IIVDELKQEVISTSSKAEPPQ--CTSLAW-SADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp SEE-EEEETTEEEEEETTTT-EEEEEECCC-------CCCCC--EEEEEE-CTTSSEEEEEETTSCEEEEEEEC--
T ss_pred cee-eccCCCEEEEEECCCC-eEEEeccccceeeeccCCCCC--EEEEEE-CCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 554 4445888888888765 4444443 45555 344666 9999999999999999999999875
No 30
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=293.28 Aligned_cols=247 Identities=17% Similarity=0.175 Sum_probs=200.9
Q ss_pred cccccEEEEEEccCCCEEEEEeCCCeEEEEEeecC--------CeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcE
Q 009569 270 AHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKED--------GQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAI 341 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~--------~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i 341 (532)
.|...|.+++|+|||++|++++ |+++++||.... ...........|...|.+++|+|++ .|++|+.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 4677899999999999999887 778888874310 0000011122356789999999985 78899999999
Q ss_pred EEEECCCCcEEEE----eeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCC-EE
Q 009569 342 RRWDVNSGECLHV----YEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGK-RI 416 (532)
Q Consensus 342 ~iwd~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l 416 (532)
++||+.+++.+.. ..+|...|++++|+|++++|++|+.|++|++||++++........|...|.+++|+|++. ++
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l 185 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVF 185 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCce
Confidence 9999999876543 347899999999999999999999999999999998887777777777999999999885 78
Q ss_pred EEEECCCeEEEEECCCCc--eee--eecCCceeEEEEcCC-CCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEE
Q 009569 417 ISICREAAILLLDREANF--ERW--IEEEEVITSFSLSKD-NKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIR 491 (532)
Q Consensus 417 ~~~~~dg~I~iwd~~~~~--~~~--~~~~~~i~~~~~sp~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~ 491 (532)
++++.|+.|++||+++++ ..+ ..+...+++++|+|+ +++|++|+.||.|++||++++ +++.++.+|...+..
T Consensus 186 ~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~-~~~~~~~~h~~~v~~-- 262 (344)
T 4gqb_B 186 LSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST-SCVLSSAVHSQCVTG-- 262 (344)
T ss_dssp EEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEE--
T ss_pred eeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC-cEEEEEcCCCCCEEE--
Confidence 999999999999999887 222 345667999999995 578899999999999999998 899999999988554
Q ss_pred EccCCCCC-cEEEEEeCCCcEEEEeCCCCCce
Q 009569 492 SCFGGFEQ-AFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 492 ~~~~s~d~-~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
++| +|++ ++|++|+.||+|+|||+.+++..
T Consensus 263 v~f-sp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 263 LVF-SPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp EEE-CSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred EEE-ccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 566 8887 68999999999999999987543
No 31
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-35 Score=295.59 Aligned_cols=250 Identities=17% Similarity=0.199 Sum_probs=201.6
Q ss_pred cccccccEEEEEEccCCCEEEEEeC------CCeEEEEEeecCCee-EEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCc
Q 009569 268 LEAHSDEVWFLQFSHDGKYLASSSK------DQSAIIWEVKEDGQV-SLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEA 340 (532)
Q Consensus 268 l~~h~~~V~~v~~s~~g~~las~s~------dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~ 340 (532)
...|...|++++|||||++||+|+. |+.|++|+..++... .......+|...|.+++|+|++. +++++.||+
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~ 116 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGA 116 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSC
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCE
Confidence 3579999999999999999999997 778999987654221 11233456889999999999975 556788999
Q ss_pred EEEEECCCCcEEE----EeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCC-E
Q 009569 341 IRRWDVNSGECLH----VYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGK-R 415 (532)
Q Consensus 341 i~iwd~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~ 415 (532)
|++||+.+++... ...+|...|.+++|+|++++|++|+.|+.|++||++++........+...|.+++|+|++. +
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 9999999887543 3346889999999999999999999999999999998887777777777999999999875 7
Q ss_pred EEEEECCCeEEEEECCCCc----eeeeecCCceeEEEEcCCC-CEEEEEecCCeEEEEecCCCCcceeEEeccccceEEE
Q 009569 416 IISICREAAILLLDREANF----ERWIEEEEVITSFSLSKDN-KYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVI 490 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~~~----~~~~~~~~~i~~~~~sp~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i 490 (532)
+++++.|+.|++||+++++ .....+...+++++|+|++ .+|++|+.|+.|++||++++ +.+..+.+|...+..
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~- 274 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP-DSAQTSAVHSQNITG- 274 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG-GGCEEECCCSSCEEE-
T ss_pred eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC-cEeEEEeccceeEEE-
Confidence 8999999999999998876 2233466789999999974 68899999999999999998 889999999988554
Q ss_pred EEccCCCCC-cEEEEEeCCCcEEEEeCCCCCce
Q 009569 491 RSCFGGFEQ-AFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 491 ~~~~~s~d~-~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
++| +|++ ++|++|+.||+|+|||+++++..
T Consensus 275 -l~~-sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 275 -LAY-SYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp -EEE-CSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred -EEE-cCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 556 7776 68999999999999999987543
No 32
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=288.30 Aligned_cols=252 Identities=15% Similarity=0.282 Sum_probs=212.9
Q ss_pred ceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCC--CCEEEEeeCCCc
Q 009569 263 QTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPN--DHQLLTCGQEEA 340 (532)
Q Consensus 263 ~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~--~~~l~s~~~dg~ 340 (532)
+++..+.+|.+.|++++|+|++++||+|+.||.|++|++..+ .......+.+|...|.+++|+++ +.+|++++.||.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC-cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 356678899999999999999999999999999999999842 34677788999999999999987 899999999999
Q ss_pred EEEEECCCCc--EEEEeeccCCceEEEEEeeC--CCeEEEEeCCCcEEEEECCCC--eEEEeecCccCceEEEEEee---
Q 009569 341 IRRWDVNSGE--CLHVYEKTGVGLISCGWFLD--GGGIFAGMTDKSICLWDLDGR--ELESWKGQKTLRISDMAITD--- 411 (532)
Q Consensus 341 i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~--- 411 (532)
|++||+.+++ .+..+..|...|.+++|+|+ +.++++++.|+.|++||++.. ........+...|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999987 67778889999999999999 999999999999999999864 22223334455899999999
Q ss_pred ----------CCCEEEEEECCCeEEEEECCCCc------eeeeecCCceeEEEEcCC---CCEEEEEecCCeEEEEecCC
Q 009569 412 ----------DGKRIISICREAAILLLDREANF------ERWIEEEEVITSFSLSKD---NKYLLVNLINQEIHLWSIES 472 (532)
Q Consensus 412 ----------~~~~l~~~~~dg~I~iwd~~~~~------~~~~~~~~~i~~~~~sp~---~~~l~~~~~dg~i~iwd~~~ 472 (532)
++.++++++.|+.|++||+++.. ..+..|...|.+++|+|+ +++|++++.||.|++||+.+
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 69999999999999999998764 344568899999999999 89999999999999999987
Q ss_pred CCcc--eeEE--eccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 473 DPKL--VSRY--KGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 473 ~~~~--~~~~--~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
.... ...+ ..|... +..++| +|++++|++++.||.|++|++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~--v~~~~~-s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDV--LWRASW-SLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp TTSCCEEEESSSSCCSSC--EEEEEE-CSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCccceeeeeccccCCCc--EEEEEE-cCCCCEEEEecCCCcEEEEeCCC
Confidence 6211 1222 235555 344666 99999999999999999999984
No 33
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.8e-34 Score=302.01 Aligned_cols=249 Identities=23% Similarity=0.442 Sum_probs=222.7
Q ss_pred CCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC
Q 009569 259 RIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE 338 (532)
Q Consensus 259 ~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d 338 (532)
....+.+..+.+|...|++++|+|++++|++++.|++|++||.... ....+.+|...|.+++|+|++++|++++.|
T Consensus 290 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~----~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 365 (577)
T 2ymu_A 290 NRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ----HLQTLTGHSSSVWGVAFSPDGQTIASASDD 365 (577)
T ss_dssp ETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC----EEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC----eeEEEeCCCCCEEEEEECCCCCEEEEEeCC
Confidence 3456778889999999999999999999999999999999998642 346678999999999999999999999999
Q ss_pred CcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEE
Q 009569 339 EAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIIS 418 (532)
Q Consensus 339 g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 418 (532)
+.|++||. +++.+..+..|...|.+++|+|++++|++++.|+.|++||..+..+..+..+ ...|.+++|+|+++++++
T Consensus 366 g~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~-~~~v~~~~~s~d~~~l~~ 443 (577)
T 2ymu_A 366 KTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH-SSSVWGVAFSPDDQTIAS 443 (577)
T ss_dssp SEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECC-SSCEEEEEECTTSSEEEE
T ss_pred CEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCC-CCCeEEEEECCCCCEEEE
Confidence 99999995 6788889999999999999999999999999999999999877666666554 458999999999999999
Q ss_pred EECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCC
Q 009569 419 ICREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGF 497 (532)
Q Consensus 419 ~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 497 (532)
++.|+.|++||..... ..+..|...|++++|+|++++|++++.|+.|++||. ++ +.+..+.+|...+.. ++| +|
T Consensus 444 ~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~-~~~~~~~~h~~~v~~--l~~-s~ 518 (577)
T 2ymu_A 444 ASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG-QLLQTLTGHSSSVRG--VAF-SP 518 (577)
T ss_dssp EETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TS-CEEEEEECCSSCEEE--EEE-CT
T ss_pred EcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CC-CEEEEEeCCCCCEEE--EEE-cC
Confidence 9999999999986655 677789999999999999999999999999999996 44 788999999988544 566 99
Q ss_pred CCcEEEEEeCCCcEEEEeCCC
Q 009569 498 EQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 498 d~~~l~sgs~dg~i~iw~~~~ 518 (532)
++++|++++.||.|++||...
T Consensus 519 dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 519 DGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp TSSCEEEEETTSEEEEECTTS
T ss_pred CCCEEEEEECcCEEEEEeCCC
Confidence 999999999999999999754
No 34
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.9e-34 Score=310.33 Aligned_cols=273 Identities=20% Similarity=0.294 Sum_probs=223.0
Q ss_pred ccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCC
Q 009569 238 LFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHR 317 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~ 317 (532)
+++++.|+.+.+|+..... .........+.+|...|++++|+|+|++|++|+.||+|+|||+.++ .....+.+|.
T Consensus 398 l~s~s~D~~i~~W~~~~~~--~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~---~~~~~~~~h~ 472 (694)
T 3dm0_A 398 IVSASRDKSIILWKLTKDD--KAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAG---VSTRRFVGHT 472 (694)
T ss_dssp EEEEETTSEEEEEECCCST--TCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---EEEEEEECCS
T ss_pred EEEEeCCCcEEEEEccCCC--cccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCC---cceeEEeCCC
Confidence 3455556666777543211 1123456788999999999999999999999999999999999876 4567788999
Q ss_pred CCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEe---eccCCceEEEEEeeCC--CeEEEEeCCCcEEEEECCCCe
Q 009569 318 KPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVY---EKTGVGLISCGWFLDG--GGIFAGMTDKSICLWDLDGRE 392 (532)
Q Consensus 318 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~ 392 (532)
..|.+++|+|++++|++|+.|++|++||+......... ..|...|.+++|+|++ ..+++|+.|+.|++||+++..
T Consensus 473 ~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~ 552 (694)
T 3dm0_A 473 KDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK 552 (694)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc
Confidence 99999999999999999999999999998755433332 3577889999999986 579999999999999999877
Q ss_pred EEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecC
Q 009569 393 LESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 393 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~ 471 (532)
+......|...|++++|+|++++|++++.|+.|++||++++. .....+...|.+++|+|++.++++++ ++.|++||+.
T Consensus 553 ~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~ 631 (694)
T 3dm0_A 553 LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLE 631 (694)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETT
T ss_pred EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECC
Confidence 777677777799999999999999999999999999999887 44445667899999999998887776 6779999999
Q ss_pred CCCcceeEEecccc-----------------ceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 472 SDPKLVSRYKGHKR-----------------ARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 472 ~~~~~~~~~~~~~~-----------------~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
++ ..+..+..+.. ..++..++| +|+|++|++|+.||.|++|++..
T Consensus 632 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 632 SK-SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNW-SADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp TT-EEEEEECCCCC----------------CCCCEEEEEE-CTTSSEEEEEETTSEEEEEEC--
T ss_pred CC-CChhhhccccccccccccccccccCCceeEEeeeEEE-cCCCCEEEEEcCCCeEEEEeccC
Confidence 87 77766654321 122445667 99999999999999999999863
No 35
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.7e-33 Score=276.61 Aligned_cols=262 Identities=13% Similarity=0.246 Sum_probs=225.2
Q ss_pred CCCceeeccCCccCCCCCcceeEEcc--cccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeE
Q 009569 244 DSDFSLYSDHQCGRNRIPSQTLQILE--AHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVF 321 (532)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~l~--~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 321 (532)
++.+.+|+...... ...+..+. +|...|.+++|+|++++|++++.|+.|++||+.++. ......+..|...|.
T Consensus 71 dg~i~iw~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~i~ 145 (337)
T 1gxr_A 71 KGCVKVWDISHPGN----KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT-PRIKAELTSSAPACY 145 (337)
T ss_dssp BSEEEEEETTSTTC----CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC---EEEEEEECSSSCEE
T ss_pred CCeEEEEECCCCCc----eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC-cceeeecccCCCceE
Confidence 77888887554221 12233333 799999999999999999999999999999998653 335667888999999
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCcc
Q 009569 322 TVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKT 401 (532)
Q Consensus 322 ~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 401 (532)
+++|+|+++++++++.|+.|++||+++++.+..+..|...+.+++|+|+++.+++++.|+.|++||+++..........
T Consensus 146 ~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~- 224 (337)
T 1gxr_A 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT- 224 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS-
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987766555443
Q ss_pred CceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEE
Q 009569 402 LRISDMAITDDGKRIISICREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRY 480 (532)
Q Consensus 402 ~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 480 (532)
..+.+++|+|+++++++++.++.|++||+++.. .....|...|.+++|+|++++|++++.||.|++||+.++ +.+..
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~-~~~~~- 302 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG-ASIFQ- 302 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEE-
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCC-eEEEE-
Confidence 489999999999999999999999999999887 666788999999999999999999999999999999987 55543
Q ss_pred eccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeC
Q 009569 481 KGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLS 516 (532)
Q Consensus 481 ~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~ 516 (532)
..|...+ ..+.| +|++++|++++.||.|++|++
T Consensus 303 ~~~~~~v--~~~~~-s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 303 SKESSSV--LSCDI-SVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EECSSCE--EEEEE-CTTSCEEEEEETTSCEEEEEE
T ss_pred ecCCCcE--EEEEE-CCCCCEEEEecCCCeEEEEEE
Confidence 3455553 34566 999999999999999999986
No 36
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.4e-34 Score=282.25 Aligned_cols=253 Identities=13% Similarity=0.205 Sum_probs=216.2
Q ss_pred EEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCC-eeEEEEEeecCCCCeEEEEeCC--CCCEEEEeeCCCcEE
Q 009569 266 QILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDG-QVSLKHRLSGHRKPVFTVSWSP--NDHQLLTCGQEEAIR 342 (532)
Q Consensus 266 ~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~-~~~~~~~~~~h~~~v~~l~~s~--~~~~l~s~~~dg~i~ 342 (532)
..+.+|.+.|++++|+|++++||+|+.||.|++||+.++. .......+.+|...|.+++|+| ++.+|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 4568999999999999999999999999999999998643 2356677889999999999999 699999999999999
Q ss_pred EEECCCC---------cEEEEeeccCCceEEEEEeeC--CCeEEEEeCCCcEEEEECCCCeEEEe-------------ec
Q 009569 343 RWDVNSG---------ECLHVYEKTGVGLISCGWFLD--GGGIFAGMTDKSICLWDLDGRELESW-------------KG 398 (532)
Q Consensus 343 iwd~~~~---------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~-------------~~ 398 (532)
+||+.++ +.+..+..|...|.+++|+|+ +.++++++.||.|++||+++...... ..
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999887 567888889999999999999 99999999999999999975331100 11
Q ss_pred CccCceEEEEEeeC---CCEEEEEECCCeEEEEECCCCc----eeeeecCCceeEEEEcCCC----CEEEEEecCCeEEE
Q 009569 399 QKTLRISDMAITDD---GKRIISICREAAILLLDREANF----ERWIEEEEVITSFSLSKDN----KYLLVNLINQEIHL 467 (532)
Q Consensus 399 ~~~~~v~~~~~s~~---~~~l~~~~~dg~I~iwd~~~~~----~~~~~~~~~i~~~~~sp~~----~~l~~~~~dg~i~i 467 (532)
.+...+.+++|+|+ +..+++++.++.+.+|+..... ..+..|...|++++|+|++ ++|++++.||.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 34458999999997 8999999999999888887765 3445688999999999998 89999999999999
Q ss_pred EecCCC---------------------------------------------CcceeEEeccccceEEEEEccCCCCCcEE
Q 009569 468 WSIESD---------------------------------------------PKLVSRYKGHKRARFVIRSCFGGFEQAFI 502 (532)
Q Consensus 468 wd~~~~---------------------------------------------~~~~~~~~~~~~~~~~i~~~~~s~d~~~l 502 (532)
||++.. .+.+..+.+|...+.. +.| +|++++|
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~--~~~-s~~~~~l 321 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWS--VSW-NLTGTIL 321 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEE--EEE-CSSSCCE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEE--EEE-cCCCCEE
Confidence 999863 1456677888887544 556 9999999
Q ss_pred EEEeCCCcEEEEeCCCCCc
Q 009569 503 ASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 503 ~sgs~dg~i~iw~~~~~~~ 521 (532)
++|+.||.|++|++.++..
T Consensus 322 ~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp EEEETTSCEEEEEECTTSC
T ss_pred EEecCCCcEEEEecCcCcc
Confidence 9999999999999998653
No 37
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.8e-33 Score=275.07 Aligned_cols=250 Identities=14% Similarity=0.197 Sum_probs=218.6
Q ss_pred EcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEee--cCCCCeEEEEeCCCCCEEEEeeCCCcEEEE
Q 009569 267 ILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS--GHRKPVFTVSWSPNDHQLLTCGQEEAIRRW 344 (532)
Q Consensus 267 ~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~--~h~~~v~~l~~s~~~~~l~s~~~dg~i~iw 344 (532)
...+|.+.|++++|+|++++|++++ ||.|++|++.++........+. .|...|.+++|+|++++|++++.|+.|++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3447999999999999999999998 9999999998765433334443 799999999999999999999999999999
Q ss_pred ECCCCc--EEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECC
Q 009569 345 DVNSGE--CLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICRE 422 (532)
Q Consensus 345 d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 422 (532)
|+.+++ ....+..|...+.+++|+|+++++++++.||.|++||+++.........+...|.+++|+|+++++++++.|
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence 999887 566778889999999999999999999999999999999877766666666799999999999999999999
Q ss_pred CeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcE
Q 009569 423 AAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAF 501 (532)
Q Consensus 423 g~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~ 501 (532)
+.|++||+++.. .....+...+.+++|+|+++++++++.++.|++||+.+. + ...+..|...+.. +.| +|++++
T Consensus 205 g~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~-~-~~~~~~~~~~v~~--~~~-~~~~~~ 279 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP-D-KYQLHLHESCVLS--LKF-AYCGKW 279 (337)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS-C-EEEECCCSSCEEE--EEE-CTTSSE
T ss_pred CcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-C-eEEEcCCccceeE--EEE-CCCCCE
Confidence 999999999887 555678889999999999999999999999999999887 3 4567778777444 556 999999
Q ss_pred EEEEeCCCcEEEEeCCCCCce
Q 009569 502 IASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 502 l~sgs~dg~i~iw~~~~~~~~ 522 (532)
|++++.||.|++|++.++...
T Consensus 280 l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 280 FVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp EEEEETTSEEEEEETTTCCEE
T ss_pred EEEecCCCcEEEEECCCCeEE
Confidence 999999999999999987644
No 38
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.9e-34 Score=289.51 Aligned_cols=279 Identities=10% Similarity=0.127 Sum_probs=231.6
Q ss_pred ccccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccC----C---CEEEEEeCCCeEEEEEeecCCe--
Q 009569 236 SCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHD----G---KYLASSSKDQSAIIWEVKEDGQ-- 306 (532)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~----g---~~las~s~dg~i~iwd~~~~~~-- 306 (532)
..+++++.++.+.+|+...... ..+...+..+.+|...|++++|+|+ + ++|++++.||.|++|++.++..
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~ 105 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDN-ENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETK 105 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTT-CCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTC
T ss_pred CeEEEEcCCCEEEEEECCCccc-ccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccc
Confidence 4566778888999997654321 2234467888899999999999999 9 9999999999999999987643
Q ss_pred eEEEEEeecC-----CCCeEEEEeC----CCCCE-EEEeeCCCcEEEEECCC------CcEEE-----Eee-------cc
Q 009569 307 VSLKHRLSGH-----RKPVFTVSWS----PNDHQ-LLTCGQEEAIRRWDVNS------GECLH-----VYE-------KT 358 (532)
Q Consensus 307 ~~~~~~~~~h-----~~~v~~l~~s----~~~~~-l~s~~~dg~i~iwd~~~------~~~~~-----~~~-------~~ 358 (532)
......+..| ...|.+++|+ |++.+ |++++.||.|++||+.+ ++.+. .+. .|
T Consensus 106 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (397)
T 1sq9_A 106 KVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP 185 (397)
T ss_dssp CEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSS
T ss_pred cccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCC
Confidence 0114667777 5899999999 99999 99999999999999988 66655 663 47
Q ss_pred CCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecC---c---cCceEEEEEeeCCCEEEEEECC---CeEEEEE
Q 009569 359 GVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQ---K---TLRISDMAITDDGKRIISICRE---AAILLLD 429 (532)
Q Consensus 359 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~---~~~v~~~~~s~~~~~l~~~~~d---g~I~iwd 429 (532)
...|.+++|+|++ .+++++.|+.|++||+++......... + ...|.+++|+|++++|++++.| +.|++||
T Consensus 186 ~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 186 SQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE 264 (397)
T ss_dssp CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred CCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEE
Confidence 8889999999999 999999999999999997666555544 4 5689999999999999999999 9999999
Q ss_pred CCCCc--eeeee-------------cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEe------cc-----
Q 009569 430 REANF--ERWIE-------------EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYK------GH----- 483 (532)
Q Consensus 430 ~~~~~--~~~~~-------------~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~----- 483 (532)
+++.. ..+.. |...|.+++|+|++++|++++.||.|++||+.++ +.+..+. +|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1sq9_A 265 TEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDIL 343 (397)
T ss_dssp TTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCGGGCSSGGGCC
T ss_pred CCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-ceeEEEecccCcccchhhhh
Confidence 99877 44455 8899999999999999999999999999999988 8888998 77
Q ss_pred ----------ccceEEEEEccCCCCC----------cEEEEEeCCCcEEEEeCCCCC
Q 009569 484 ----------KRARFVIRSCFGGFEQ----------AFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 484 ----------~~~~~~i~~~~~s~d~----------~~l~sgs~dg~i~iw~~~~~~ 520 (532)
...+.. ++| +|++ ++|++++.||.|++|++.+++
T Consensus 344 ~g~~~~~~~~~~~v~~--~~~-~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 344 AVDEHGDSLAEPGVFD--VKF-LKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CBCTTSCBCSSCCEEE--EEE-ECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccccCCceeE--EEe-ccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 666444 556 8888 799999999999999998763
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.8e-34 Score=293.44 Aligned_cols=268 Identities=12% Similarity=0.156 Sum_probs=219.3
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.++.++.++.+.+|+..+. +....+..| ..+....|+|++++||+|+.||.|++||+.++ .....+.+|
T Consensus 70 ~l~~~~~d~~v~i~d~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~h 138 (420)
T 3vl1_A 70 HLYKARLDGHDFLFNTIIR-------DGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN---LQREIDQAH 138 (420)
T ss_dssp TEEEEEETTEEEEEECCSE-------ETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC---EEEEETTSS
T ss_pred eEEEEEcCCcEEEEEeccc-------ceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc---ceeeecccc
Confidence 3455666777788865432 222334445 45566688999999999999999999999865 456677899
Q ss_pred CCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEe
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESW 396 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 396 (532)
...|.+++|+|++++|++++.|+.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++||++++.....
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 218 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHT 218 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987665544
Q ss_pred ecC---cc---------------------CceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eee-eecCCceeEEEE
Q 009569 397 KGQ---KT---------------------LRISDMAITDDGKRIISICREAAILLLDREANF--ERW-IEEEEVITSFSL 449 (532)
Q Consensus 397 ~~~---~~---------------------~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~-~~~~~~i~~~~~ 449 (532)
... +. ..+.+++|+|+++++++++.||.|++||+++.. ..+ ..|...|++++|
T Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 298 (420)
T 3vl1_A 219 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTV 298 (420)
T ss_dssp ECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEE
T ss_pred eecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEE
Confidence 432 22 234445557889999999999999999999887 222 347789999999
Q ss_pred cCCCC-EEEEEecCCeEEEEecCCCCcceeEEecc-ccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 450 SKDNK-YLLVNLINQEIHLWSIESDPKLVSRYKGH-KRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 450 sp~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
+|+++ +|++++.||.|++||++++..++..+.+| ... +...+ .+++.+|++++.||.|++|++..+
T Consensus 299 ~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~---v~~~~-~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 299 DGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTP---INNVY-FAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp CSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSC---EEEEE-EETTEEEEEETTTEEEEEEEECCT
T ss_pred eCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCC---ceEEE-eCCCCEEEEecCCccEEEEeccCC
Confidence 99998 99999999999999999875667888874 444 33334 467889999999999999998874
No 40
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-33 Score=276.17 Aligned_cols=269 Identities=20% Similarity=0.279 Sum_probs=230.6
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.++.++.++.+.+|+... .+.+..+.+|.+.|++++|+|++++|++++.||.|++||+.++. ....+. |
T Consensus 46 ~l~~~~~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~-~ 114 (369)
T 3zwl_B 46 LLFSCSKDSSASVWYSLN-------GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ---CVATWK-S 114 (369)
T ss_dssp EEEEEESSSCEEEEETTT-------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC---EEEEEE-C
T ss_pred EEEEEeCCCEEEEEeCCC-------chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---EEEEee-c
Confidence 345556677778886433 56788899999999999999999999999999999999998764 334444 8
Q ss_pred CCCeEEEEeCCCCCEEEEeeCC-----CcEEEEECCCCc-----------EEEEeeccCC--ceEEEEEeeCCCeEEEEe
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQE-----EAIRRWDVNSGE-----------CLHVYEKTGV--GLISCGWFLDGGGIFAGM 378 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~-----------~~~~~~~~~~--~i~~~~~~~~~~~l~~~~ 378 (532)
...|.+++|+|+++++++++.+ +.|.+||+.++. ....+..+.. .+.+++|+|+++.+++++
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 8899999999999999999999 999999997653 3344445555 899999999999999999
Q ss_pred CCCcEEEEECCC-CeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEE
Q 009569 379 TDKSICLWDLDG-RELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYL 456 (532)
Q Consensus 379 ~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l 456 (532)
.||.|++||+++ .........+...|.+++|+|++++|++++.|+.|++||+++.. .....+...+.+++|+|+++++
T Consensus 195 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l 274 (369)
T 3zwl_B 195 KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFI 274 (369)
T ss_dssp TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEE
T ss_pred CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceE
Confidence 999999999987 56555555556699999999999999999999999999999887 5555688899999999999999
Q ss_pred EEEecCC--------------eEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 457 LVNLINQ--------------EIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 457 ~~~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
++++.++ .+++||+.++ +.+..+.+|...+.. +.| +|++++|++++.||.|++|++.++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~--~~~-s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 275 ILGGGQEAKDVTTTSANEGKFEARFYHKIFE-EEIGRVQGHFGPLNT--VAI-SPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EEEECCC-------------CEEEEEETTTC-CEEEEEECCSSCEEE--EEE-CTTSSEEEEEETTSEEEEEEECHHH
T ss_pred EEeecCCCceEEEEecCCCcceeEEEecCCC-cchhheecccCcEEE--EEE-CCCCCEEEEEcCCCeEEEEECcccc
Confidence 9999888 8999999998 888999999888544 556 9999999999999999999998753
No 41
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2e-33 Score=304.76 Aligned_cols=252 Identities=18% Similarity=0.285 Sum_probs=217.7
Q ss_pred eeEEcccccccEEEEEEccC-CCEEEEEeCCCeEEEEEeecCCe--eEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCc
Q 009569 264 TLQILEAHSDEVWFLQFSHD-GKYLASSSKDQSAIIWEVKEDGQ--VSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEA 340 (532)
Q Consensus 264 ~~~~l~~h~~~V~~v~~s~~-g~~las~s~dg~i~iwd~~~~~~--~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~ 340 (532)
....+++|.+.|++++|+|+ +++|+||+.|++|++|++.+... ......+.+|...|.+++|+|++++|++|+.|++
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 34568899999999999986 47999999999999999975432 2345678899999999999999999999999999
Q ss_pred EEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEee---cCccCceEEEEEeeCC--CE
Q 009569 341 IRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWK---GQKTLRISDMAITDDG--KR 415 (532)
Q Consensus 341 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~~s~~~--~~ 415 (532)
|++||+.++.++..+.+|...|.+++|+|++++|++|+.|++|++||+.+....... ..|...|.+++|+|++ ..
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 999999999999999999999999999999999999999999999999876554443 2455589999999987 58
Q ss_pred EEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEc
Q 009569 416 IISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSC 493 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~ 493 (532)
+++++.|+.|++||+++.. ..+..|...|++++|+|++++|++++.||.|++||+.++ +.+..+..+. . +..++
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~-~~~~~~~~~~-~--v~~~~ 609 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG-KKLYSLEANS-V--IHALC 609 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT-EEEECCBCSS-C--EEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-ceEEEecCCC-c--EEEEE
Confidence 9999999999999999877 566789999999999999999999999999999999988 6766665543 3 34466
Q ss_pred cCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 494 FGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 494 ~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
| +|++.++++++ |+.|++||+.++..
T Consensus 610 ~-sp~~~~l~~~~-~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 610 F-SPNRYWLCAAT-EHGIKIWDLESKSI 635 (694)
T ss_dssp E-CSSSSEEEEEE-TTEEEEEETTTTEE
T ss_pred E-cCCCcEEEEEc-CCCEEEEECCCCCC
Confidence 6 99998887765 56699999998754
No 42
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.6e-34 Score=287.42 Aligned_cols=267 Identities=16% Similarity=0.278 Sum_probs=218.6
Q ss_pred ccccCCCCCceeeccCCccCCCCCcceeEEcc-----cccccEEEEEEccC----CCEEEEEeCCCeEEEEEeecCCeeE
Q 009569 238 LFHNTSDSDFSLYSDHQCGRNRIPSQTLQILE-----AHSDEVWFLQFSHD----GKYLASSSKDQSAIIWEVKEDGQVS 308 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~h~~~V~~v~~s~~----g~~las~s~dg~i~iwd~~~~~~~~ 308 (532)
++....++.+.+|+... .+.+..+. .|...|++++|+|+ |.+|++|+.||.|++||+.++ .
T Consensus 37 ~~~~~~~~~v~vw~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~---~ 106 (366)
T 3k26_A 37 VFATVGSNRVTLYECHS-------QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM---Q 106 (366)
T ss_dssp EEEEEETTEEEEEEECG-------GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC---C
T ss_pred EEEECCCCEEEEEEcCC-------CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc---e
Confidence 44555566778886553 23333333 36688999999998 779999999999999999876 4
Q ss_pred EEEEeecCCCCeEEEEeCC-CCCEEEEeeCCCcEEEEECCCCcEEEEe---eccCCceEEEEEeeCCCeEEEEeCCCcEE
Q 009569 309 LKHRLSGHRKPVFTVSWSP-NDHQLLTCGQEEAIRRWDVNSGECLHVY---EKTGVGLISCGWFLDGGGIFAGMTDKSIC 384 (532)
Q Consensus 309 ~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 384 (532)
....+.+|...|.+++|+| ++.+|++++.||.|++||+++++.+..+ ..|...|.+++|+|+++++++++.||.|+
T Consensus 107 ~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 186 (366)
T 3k26_A 107 CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLK 186 (366)
T ss_dssp EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEE
Confidence 5567889999999999999 8999999999999999999999998888 67899999999999999999999999999
Q ss_pred EEECCCCeEEE----------------------------eecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--
Q 009569 385 LWDLDGRELES----------------------------WKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-- 434 (532)
Q Consensus 385 iwd~~~~~~~~----------------------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-- 434 (532)
+||+++..... ....+...|.+++|+ ++++++++.|+.|++||+.+..
T Consensus 187 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~ 264 (366)
T 3k26_A 187 LWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDD 264 (366)
T ss_dssp EEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCC
T ss_pred EEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccc
Confidence 99998643221 111255689999999 7799999999999999987752
Q ss_pred --------------eeeeecCCceeEEEEcCC--CCEEEEEecCCeEEEEecCCCCcc----eeEEeccccceEEEEEcc
Q 009569 435 --------------ERWIEEEEVITSFSLSKD--NKYLLVNLINQEIHLWSIESDPKL----VSRYKGHKRARFVIRSCF 494 (532)
Q Consensus 435 --------------~~~~~~~~~i~~~~~sp~--~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~i~~~~ 494 (532)
..+..|...|++++|+|+ +++|++++.||.|++||+.++ +. ...+.+|.....+..++|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~ 343 (366)
T 3k26_A 265 IDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE-DPHKAKCTTLTHHKCGAAIRQTSF 343 (366)
T ss_dssp GGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS-SGGGCEEEEECCTTCCSCEEEEEE
T ss_pred ccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC-CCccccceEEcccccCCceEEEEe
Confidence 334457788999999999 999999999999999999887 43 347777732223455667
Q ss_pred CCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 495 GGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 495 ~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
+|++++|++++.||.|++||+.+
T Consensus 344 -s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 344 -SRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp -CTTSSEEEEEETTSEEEEEEC--
T ss_pred -CCCCCeEEEEeCCCEEEEEEecC
Confidence 99999999999999999999863
No 43
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-33 Score=284.31 Aligned_cols=269 Identities=16% Similarity=0.259 Sum_probs=223.0
Q ss_pred ccccCCCCCceeeccCCccCCCCCcceeEEccc-ccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 238 LFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEA-HSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
++..+.++.+.+|+..+ .+....+.. |...|++++|+|++++|++|+.||.|++||+.++ .....+.+|
T Consensus 106 l~~~~~d~~v~lw~~~~-------~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~ 175 (401)
T 4aez_A 106 VVAVALERNVYVWNADS-------GSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ---TKLRTMAGH 175 (401)
T ss_dssp EEEEEETTEEEEEETTT-------CCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC---CEEEEECCC
T ss_pred EEEEECCCeEEEeeCCC-------CcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC---eEEEEecCC
Confidence 44556667777776543 344444444 8999999999999999999999999999999876 455777899
Q ss_pred CCCeEEEEeCCCCCEEEEeeCCCcEEEEECC-CCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEE
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQEEAIRRWDVN-SGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELES 395 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 395 (532)
...|.+++| ++.+|++++.||.|++||++ .+..+..+..|...|.+++|+|+++++++|+.|+.|++||+++.....
T Consensus 176 ~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 253 (401)
T 4aez_A 176 QARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKF 253 (401)
T ss_dssp SSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEE
T ss_pred CCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccE
Confidence 999999999 56799999999999999998 567788889999999999999999999999999999999999876665
Q ss_pred eecCccCceEEEEEeeCCC-EEEEEE--CCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEE--ecCCeEEEEe
Q 009569 396 WKGQKTLRISDMAITDDGK-RIISIC--REAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVN--LINQEIHLWS 469 (532)
Q Consensus 396 ~~~~~~~~v~~~~~s~~~~-~l~~~~--~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~--~~dg~i~iwd 469 (532)
....+...|.+++|+|++. ++++++ .|+.|++||+.++. .....+...|.+++|+|++++++++ +.||.|++||
T Consensus 254 ~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~ 333 (401)
T 4aez_A 254 TKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWS 333 (401)
T ss_dssp EECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEE
T ss_pred EecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEe
Confidence 5555666999999999775 555554 69999999999887 5556678899999999999999995 4899999999
Q ss_pred cCCCCcce--eEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 470 IESDPKLV--SRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 470 ~~~~~~~~--~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
+.++ ... ..+.+|...+.. +.| +|++.+|++++.||.|++|++.++...
T Consensus 334 ~~~~-~~~~~~~~~~h~~~v~~--~~~-s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 334 YSSS-GLTKQVDIPAHDTRVLY--SAL-SPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EETT-EEEEEEEEECCSSCCCE--EEE-CTTSSEEEEECTTSEEEEEECCC----
T ss_pred cCCc-cceeEEEecCCCCCEEE--EEE-CCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 9886 333 346688877544 556 999999999999999999999987643
No 44
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.9e-33 Score=280.18 Aligned_cols=255 Identities=15% Similarity=0.126 Sum_probs=212.2
Q ss_pred cceeEEcccccccEEEEEEccCC-CEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCC-CCCEEEEeeCCC
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDG-KYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSP-NDHQLLTCGQEE 339 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g-~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg 339 (532)
.+....+.+|.+.|++++|+|++ ++||+|+.||.|++||+.++.. .......+|...|.+++|+| ++.+|++++.|+
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK-TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC-EEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc-ceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 35566788999999999999999 9999999999999999986543 23333457999999999999 789999999999
Q ss_pred cEEEEECCCCcEEEEeecc---CCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCC-E
Q 009569 340 AIRRWDVNSGECLHVYEKT---GVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGK-R 415 (532)
Q Consensus 340 ~i~iwd~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~ 415 (532)
.|++||+.+ ..+..+..+ ...|.+++|+|+++++++|+.|+.|++||+++..+..+..+. ..|.+++|+|+++ +
T Consensus 142 ~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~-~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 142 ATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHK-AKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSS-SCEEEEEECSSCTTE
T ss_pred EEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCC-CcEEEEEECCCCCCE
Confidence 999999985 555555544 378999999999999999999999999999877766666544 5999999999999 9
Q ss_pred EEEEECCCeEEEEECCC----Cc-eeeeecCCceeEEEEcC-CCCEEEEEecCCeEEEEecCCCCcceeEEeccccc---
Q 009569 416 IISICREAAILLLDREA----NF-ERWIEEEEVITSFSLSK-DNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRA--- 486 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~----~~-~~~~~~~~~i~~~~~sp-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--- 486 (532)
+++++.|+.|++||+++ .. .....|...|++++|+| ++++|++++.|+.|++||+++. ..+..+.+|...
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~ 298 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW-SKPDQIIIHPHRQFQ 298 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT-TSCSEEEECCBCCCT
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC-ccccccccccccccc
Confidence 99999999999999987 33 44457999999999999 9999999999999999999987 666777655321
Q ss_pred ------------eEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCcee
Q 009569 487 ------------RFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 487 ------------~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~~ 523 (532)
...+.+.| +|++++ +|+.||.|++||+.++....
T Consensus 299 ~~~~~~~~~~p~~~~~~~~~-s~dg~~--s~s~d~~i~iwd~~~~~~~~ 344 (383)
T 3ei3_B 299 HLTPIKATWHPMYDLIVAGR-YPDDQL--LLNDKRTIDIYDANSGGLVH 344 (383)
T ss_dssp TSCCCCCEECSSSSEEEEEC-BCCTTT--CTTCCCCEEEEETTTCCEEE
T ss_pred cccceEEeccCCCCceEEEe-cCCccc--ccCCCCeEEEEecCCCceee
Confidence 01222444 677766 77899999999999876533
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.8e-33 Score=282.66 Aligned_cols=267 Identities=12% Similarity=0.101 Sum_probs=212.5
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEc--ccccccEEEEEEcc-CCCEEEEEeCCCeEEEEEeecCCeeEEEEEe
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQIL--EAHSDEVWFLQFSH-DGKYLASSSKDQSAIIWEVKEDGQVSLKHRL 313 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~h~~~V~~v~~s~-~g~~las~s~dg~i~iwd~~~~~~~~~~~~~ 313 (532)
.++.++.++.+.+|+... .+....+ .+|.+.|++++|+| ++++|++++.|+.|++||+.+ .........
T Consensus 88 ~l~s~~~dg~i~iwd~~~-------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~ 159 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDV-------QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKT 159 (383)
T ss_dssp EEEEEEBTSCEEEEETTS-------TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECC
T ss_pred EEEEEcCCCeEEEEeCCC-------cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEecc
Confidence 455666677888886543 2233333 47999999999999 789999999999999999984 333333333
Q ss_pred ecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCC-eEEEEeCCCcEEEEECCC--
Q 009569 314 SGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGG-GIFAGMTDKSICLWDLDG-- 390 (532)
Q Consensus 314 ~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~-- 390 (532)
..|...|.+++|+|++++|++++.|+.|++||+ +++.+..+..|...|.+++|+|+++ ++++|+.|+.|++||+++
T Consensus 160 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 238 (383)
T 3ei3_B 160 DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIK 238 (383)
T ss_dssp CCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCC
T ss_pred CCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCC
Confidence 445688999999999999999999999999999 5788899999999999999999999 899999999999999986
Q ss_pred --CeEEEeecCccCceEEEEEee-CCCEEEEEECCCeEEEEECCCCc--eeeeecC-----------------CceeEEE
Q 009569 391 --RELESWKGQKTLRISDMAITD-DGKRIISICREAAILLLDREANF--ERWIEEE-----------------EVITSFS 448 (532)
Q Consensus 391 --~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~-----------------~~i~~~~ 448 (532)
........ +...|.+++|+| ++.+|++++.|+.|++||+++.. ..+..|. ..+..++
T Consensus 239 ~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 317 (383)
T 3ei3_B 239 DKNSYIAEMP-HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAG 317 (383)
T ss_dssp STTCEEEEEE-CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEE
T ss_pred cccceEEEec-CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEE
Confidence 44544443 455999999999 99999999999999999998876 3333221 3344466
Q ss_pred EcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 449 LSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 449 ~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
|+|++++ +++.||.|++||+.++ +.+..+.++.....+..++| +|++.+|++|+ ||.|++|++++
T Consensus 318 ~s~dg~~--s~s~d~~i~iwd~~~~-~~~~~l~~~~~~~~~~~~~~-s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 318 RYPDDQL--LLNDKRTIDIYDANSG-GLVHQLRDPNAAGIISLNKF-SPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CBCCTTT--CTTCCCCEEEEETTTC-CEEEEECBTTBCSCCCEEEE-CTTSSEEEEEE-TTEEEEEECC-
T ss_pred ecCCccc--ccCCCCeEEEEecCCC-ceeeeecCCCCCceEEEEEE-ecCccEEEEec-CCcEEEEecCC
Confidence 6666666 6678999999999988 88888887542211222356 99999999997 99999999875
No 46
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.7e-33 Score=279.48 Aligned_cols=245 Identities=12% Similarity=0.150 Sum_probs=214.4
Q ss_pred cccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECC
Q 009569 268 LEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVN 347 (532)
Q Consensus 268 l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 347 (532)
+..|.++|++++|+|++++|++|+.|+.|++||+.++ .......+.+|...|.+++|+|++++|++++.||.|++||+.
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN-KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT-EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC-cEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 4459999999999999999999999999999999865 334678888999999999999999999999999999999999
Q ss_pred CCcEEEEe--eccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCe----EEEeecCccCceEEEEEeeCCCEEEEEEC
Q 009569 348 SGECLHVY--EKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRE----LESWKGQKTLRISDMAITDDGKRIISICR 421 (532)
Q Consensus 348 ~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 421 (532)
+++....+ ..|...|.+++|+|+++++++++.|+.|++||++... .......+...|.+++|+|+++++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 88755443 5688899999999999999999999999999997643 34444555668999999999999999999
Q ss_pred CCeEEEEECC------------------CCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEe
Q 009569 422 EAAILLLDRE------------------ANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYK 481 (532)
Q Consensus 422 dg~I~iwd~~------------------~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 481 (532)
|+.|++||++ ... ..+..|...|.+++|+|++++|++++.||.|++||++++ +.+..+.
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~ 241 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK-MAVATLA 241 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT-TEEEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC-ceeEEEc
Confidence 9999999964 333 445578889999999999999999999999999999988 8889999
Q ss_pred ccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 482 GHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 482 ~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
.|...+.. ++| +|++.+|++| .||.|++|++.+
T Consensus 242 ~~~~~v~~--~~~-~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 242 SETLPLLA--VTF-ITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp CSSCCEEE--EEE-EETTEEEEEE-TTSSCEEEEEET
T ss_pred cCCCCeEE--EEE-ecCCCEEEEE-eCCeEEEEEccC
Confidence 99877544 555 8999988887 999999999988
No 47
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.4e-33 Score=277.93 Aligned_cols=274 Identities=12% Similarity=0.153 Sum_probs=223.1
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.++.++.++.+.+|+..... .+.+..+.+|...|++++|+|++++|++++.||.|++||+.++ .......+..|
T Consensus 22 ~l~~~~~d~~v~i~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~ 95 (372)
T 1k8k_C 22 QIAICPNNHEVHIYEKSGNK-----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR-TWKPTLVILRI 95 (372)
T ss_dssp EEEEECSSSEEEEEEEETTE-----EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT-EEEEEEECCCC
T ss_pred EEEEEeCCCEEEEEeCCCCc-----EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC-eeeeeEEeecC
Confidence 34455567777888644310 1277888899999999999999999999999999999999865 33344556789
Q ss_pred CCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcE----EEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECC---
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGEC----LHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLD--- 389 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~--- 389 (532)
...|.+++|+|++++|++++.|+.|++||+.++.. ......|...|.+++|+|+++++++++.||.|++||++
T Consensus 96 ~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 175 (372)
T 1k8k_C 96 NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKE 175 (372)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTT
T ss_pred CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccc
Confidence 99999999999999999999999999999988762 23335678899999999999999999999999999963
Q ss_pred ---------------CCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCC
Q 009569 390 ---------------GRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKD 452 (532)
Q Consensus 390 ---------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~ 452 (532)
.+........+...|.+++|+|+++++++++.|+.|++||++++. ..+..|..+|.+++|+|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 255 (372)
T 1k8k_C 176 VEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITE 255 (372)
T ss_dssp TSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEET
T ss_pred ccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecC
Confidence 344444444555689999999999999999999999999998877 566678889999999999
Q ss_pred CCEEEEEecCCeEEEEecCC--CC-------------------------------cce------eEE-eccccceEEEEE
Q 009569 453 NKYLLVNLINQEIHLWSIES--DP-------------------------------KLV------SRY-KGHKRARFVIRS 492 (532)
Q Consensus 453 ~~~l~~~~~dg~i~iwd~~~--~~-------------------------------~~~------~~~-~~~~~~~~~i~~ 492 (532)
+++++++ .|+.|++|++.+ +. ... ..+ .+|...+.. +
T Consensus 256 ~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~--~ 332 (372)
T 1k8k_C 256 SSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQ--I 332 (372)
T ss_dssp TEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEE--E
T ss_pred CCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcce--e
Confidence 9988888 899999999987 30 000 222 478887554 4
Q ss_pred ccCCCCC---cEEEEEeCCCcEEEEeCCCC
Q 009569 493 CFGGFEQ---AFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 493 ~~~s~d~---~~l~sgs~dg~i~iw~~~~~ 519 (532)
+|++++| .+|++|+.||.|++|++.++
T Consensus 333 ~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 333 SVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp EEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred EEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 4446787 99999999999999999774
No 48
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-32 Score=267.98 Aligned_cols=269 Identities=16% Similarity=0.202 Sum_probs=230.6
Q ss_pred cccccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEee
Q 009569 235 DSCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS 314 (532)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~ 314 (532)
...+++++.++.+.+|+... .+....+..|...|.+++|+|++++|++|+.||.|++|++...........+.
T Consensus 29 ~~~l~s~~~dg~v~vw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~ 101 (313)
T 3odt_A 29 DSKVASVSRDGTVRLWSKDD-------QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI 101 (313)
T ss_dssp TTEEEEEETTSEEEEEEESS-------SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC
T ss_pred CCEEEEEEcCCcEEEEECCC-------CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh
Confidence 34566777888888987533 45677888999999999999999999999999999999998655445567788
Q ss_pred cCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEee-CCCeEEEEeCCCcEEEEECCCCeE
Q 009569 315 GHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFL-DGGGIFAGMTDKSICLWDLDGREL 393 (532)
Q Consensus 315 ~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~ 393 (532)
+|...|.+++| ++.++++++.|+.|++|| .++....+..|...+.++.|+| +++.+++++.|+.|++||. ....
T Consensus 102 ~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~ 176 (313)
T 3odt_A 102 GHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN-DKVI 176 (313)
T ss_dssp CCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET-TEEE
T ss_pred hcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec-CceE
Confidence 99999999999 678999999999999999 7788888999999999999999 9999999999999999993 3444
Q ss_pred EEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecC
Q 009569 394 ESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 394 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~ 471 (532)
..+...+...|.+++|+|++. +++++.|+.|++||++++. ..+..|...|++++|+|++ .|++++.||.|++||+.
T Consensus 177 ~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 177 KTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp EEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTT
T ss_pred EEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECC
Confidence 455554666999999999998 9999999999999999887 5566789999999999999 58899999999999999
Q ss_pred CCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 472 SDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
++ +.+..+..|...+.. ++| +|+++ +++++.||.|++|++.++...
T Consensus 255 ~~-~~~~~~~~~~~~i~~--~~~-~~~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 255 NG-SLKQVITLPAISIWS--VDC-MSNGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp TC-CEEEEEECSSSCEEE--EEE-CTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred CC-ceeEEEeccCceEEE--EEE-ccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence 98 888999999877444 555 88998 567999999999999986543
No 49
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-33 Score=285.49 Aligned_cols=271 Identities=19% Similarity=0.257 Sum_probs=227.5
Q ss_pred CCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCe-eEEEEEeecCCCCe
Q 009569 242 TSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQ-VSLKHRLSGHRKPV 320 (532)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v 320 (532)
+.++.+.+|+....... +++..+ .|...|++++|+|++++|++|+.||.|++|++.+... ......+.+|...|
T Consensus 42 ~~d~~v~iw~~~~~~~~----~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v 116 (416)
T 2pm9_A 42 STDSSLELWSLLAADSE----KPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSV 116 (416)
T ss_dssp CCCCCCEEEESSSGGGC----SCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCC
T ss_pred CCCCeEEEEEccCCCCC----cEEEEE-ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccce
Confidence 56778888876543211 223333 4899999999999999999999999999999986211 13667888999999
Q ss_pred EEEEeCCC-CCEEEEeeCCCcEEEEECCCCc------EEE---EeeccCCceEEEEEeeC-CCeEEEEeCCCcEEEEECC
Q 009569 321 FTVSWSPN-DHQLLTCGQEEAIRRWDVNSGE------CLH---VYEKTGVGLISCGWFLD-GGGIFAGMTDKSICLWDLD 389 (532)
Q Consensus 321 ~~l~~s~~-~~~l~s~~~dg~i~iwd~~~~~------~~~---~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~ 389 (532)
.+++|+|+ +.+|++++.|+.|++||+.+++ ... .+..|...|.+++|+|+ +.++++++.|+.|++||++
T Consensus 117 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 117 KTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp CEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred EEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 99999998 8999999999999999999886 332 23568889999999998 7899999999999999999
Q ss_pred CCeEEEeecCc------cCceEEEEEeeCC-CEEEEEECCC---eEEEEECCCCc---eeee-ecCCceeEEEEcC-CCC
Q 009569 390 GRELESWKGQK------TLRISDMAITDDG-KRIISICREA---AILLLDREANF---ERWI-EEEEVITSFSLSK-DNK 454 (532)
Q Consensus 390 ~~~~~~~~~~~------~~~v~~~~~s~~~-~~l~~~~~dg---~I~iwd~~~~~---~~~~-~~~~~i~~~~~sp-~~~ 454 (532)
+.........+ ...|.+++|+|++ .++++++.|+ .|++||+++.. ..+. .|...|++++|+| +++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 276 (416)
T 2pm9_A 197 AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH 276 (416)
T ss_dssp TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS
T ss_pred CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC
Confidence 87665555443 5689999999997 6899999998 99999999863 4455 6899999999999 999
Q ss_pred EEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCC-cEEEEEeCCCcEEEEeCCCCCc
Q 009569 455 YLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQ-AFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 455 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~-~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
+|++++.||.|++||+.++ +.+..+.+|...+.. ++| +|++ .+|++++.||.|++|++.++..
T Consensus 277 ~l~s~~~dg~v~~wd~~~~-~~~~~~~~~~~~v~~--~~~-s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 277 LLLSSGRDNTVLLWNPESA-EQLSQFPARGNWCFK--TKF-APEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp CEEEEESSSEEEEECSSSC-CEEEEEECSSSCCCC--EEE-CTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred eEEEEeCCCCEEEeeCCCC-ccceeecCCCCceEE--EEE-CCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 9999999999999999998 889999999887554 556 8898 8999999999999999988653
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-34 Score=288.11 Aligned_cols=245 Identities=12% Similarity=0.164 Sum_probs=202.2
Q ss_pred EcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEEC
Q 009569 267 ILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDV 346 (532)
Q Consensus 267 ~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~ 346 (532)
.++.|.++|++++|+|+|++||+|+.|+.|++||+.++ .......+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN-GWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT-EEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC-ceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 34457789999999999999999999999999999854 33466778899999999999999999999999999999999
Q ss_pred CCCc---EEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCe----EEEeecCccCceEEEEEeeCCCEEEEE
Q 009569 347 NSGE---CLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRE----LESWKGQKTLRISDMAITDDGKRIISI 419 (532)
Q Consensus 347 ~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~ 419 (532)
.+++ ....+..|...|.+++|+|++++|++|+.|+.|++||+++.. ...+...+...|.+++|+|++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 9887 667778899999999999999999999999999999998765 444554366699999999999999999
Q ss_pred ECCCeEEEEECCC------------------Cc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcc---
Q 009569 420 CREAAILLLDREA------------------NF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKL--- 476 (532)
Q Consensus 420 ~~dg~I~iwd~~~------------------~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~--- 476 (532)
+.|+.|++||+.. +. ..+ .|...|++++|+|++++|++++.||.|++||+.++ +.
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~-~~~~~ 242 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP-EQPPR 242 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST-TSCEE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC-CCcce
Confidence 9999999999852 22 223 78899999999999999999999999999999988 55
Q ss_pred -eeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 477 -VSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 477 -~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
+..+.+|...+.. ++| +|++++|++|+.|+.+ +|+...
T Consensus 243 ~~~~~~~~~~~v~~--~~~-s~~~~~l~~~~~~~~~-~~~~~~ 281 (377)
T 3dwl_C 243 ALITVKLSQLPLRS--LLW-ANESAIVAAGYNYSPI-LLQGNE 281 (377)
T ss_dssp ECCCEECSSSCEEE--EEE-EETTEEEEEESSSSEE-EECCCC
T ss_pred eeEeecCCCCceEE--EEE-cCCCCEEEEEcCCcEE-EEEeCC
Confidence 7888899887544 566 8999999998766655 776653
No 51
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.1e-33 Score=305.77 Aligned_cols=253 Identities=17% Similarity=0.223 Sum_probs=226.6
Q ss_pred ceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEE
Q 009569 263 QTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIR 342 (532)
Q Consensus 263 ~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~ 342 (532)
+..+.+.+|.+.|++++|+|+|++||+|+.||.|+|||+.++ .....+.+|..+|.+++|+|++++|++++.||.|+
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ---VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT---EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC---ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 456788999999999999999999999999999999999876 45677889999999999999999999999999999
Q ss_pred EEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCC-eEEEeecCccCceEEEEEee-CCCEEEEEE
Q 009569 343 RWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGR-ELESWKGQKTLRISDMAITD-DGKRIISIC 420 (532)
Q Consensus 343 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~ 420 (532)
+||+.+++.+..+..|...|.+++|+|+++++++++.||.|++||++++ ........+...|.+++|+| ++..+++++
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 9999999999999999999999999999999999999999999999865 55555555666899999999 889999999
Q ss_pred CCCeEEEEECCCCc--eeeee-cCCceeEEEEcC--CCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccC
Q 009569 421 REAAILLLDREANF--ERWIE-EEEVITSFSLSK--DNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFG 495 (532)
Q Consensus 421 ~dg~I~iwd~~~~~--~~~~~-~~~~i~~~~~sp--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~ 495 (532)
.||.|++||+.+.. ..... +...+.+++|+| ++.++++++.||.|++||+.++ +.+..+.+|...+.. ++|
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~v~~--~~~- 236 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK-SCVATLEGHMSNVSF--AVF- 236 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT-EEEEEEECCSSCEEE--EEE-
T ss_pred CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC-cEEEEEcCCCCCEEE--EEE-
Confidence 99999999998776 33333 348899999999 9999999999999999999988 888999999887544 556
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 496 GFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 496 s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
+|++.+|++++.||.|++||+.++...
T Consensus 237 ~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 237 HPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 999999999999999999999986543
No 52
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.2e-33 Score=286.45 Aligned_cols=250 Identities=17% Similarity=0.324 Sum_probs=206.6
Q ss_pred ccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCC--------eeEEEEEeecCC------------CCeEEEEeCCCC-
Q 009569 271 HSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDG--------QVSLKHRLSGHR------------KPVFTVSWSPND- 329 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~--------~~~~~~~~~~h~------------~~v~~l~~s~~~- 329 (532)
|.+.|++++|+|+|++||+|+.||.|+||++.++. .+.....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 78999999999999999999999999999998653 233567888998 889999999998
Q ss_pred -CEEEEeeCCCcEEEEECCCCcEE---------------------------------------EE-eeccCCceEEEEEe
Q 009569 330 -HQLLTCGQEEAIRRWDVNSGECL---------------------------------------HV-YEKTGVGLISCGWF 368 (532)
Q Consensus 330 -~~l~s~~~dg~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~i~~~~~~ 368 (532)
.+|++++.|++|++||+.++... .. ..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 79999999999999999765432 12 35788999999999
Q ss_pred eCCCeEEEEeCCCcEEEEECC-CCeEEEe-------ecCccCceEEEEEeeCC-CEEEEEECCCeEEEEECCCCc-----
Q 009569 369 LDGGGIFAGMTDKSICLWDLD-GRELESW-------KGQKTLRISDMAITDDG-KRIISICREAAILLLDREANF----- 434 (532)
Q Consensus 369 ~~~~~l~~~~~dg~i~iwd~~-~~~~~~~-------~~~~~~~v~~~~~s~~~-~~l~~~~~dg~I~iwd~~~~~----- 434 (532)
|++++|++| .|+.|++||++ +...... ...+...|.+++|+|++ +++++++.||.|++||+++..
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 999999998 79999999998 3333331 33455689999999998 999999999999999998865
Q ss_pred -eeeeecCC------------ceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceE-------------
Q 009569 435 -ERWIEEEE------------VITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARF------------- 488 (532)
Q Consensus 435 -~~~~~~~~------------~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~------------- 488 (532)
..+..+.. .|.+++|+|++++|++++. +.|++||+++..+++..+.+|.....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 23334443 8999999999999999998 99999999973388899998864221
Q ss_pred EEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCcee
Q 009569 489 VIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 489 ~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~~ 523 (532)
...++| +|++.+|++|+.||.|++||+.++....
T Consensus 345 ~~~~~~-s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 345 KFECCW-NGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp CCCEEE-CTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred ceEEEE-CCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 112566 9999999999999999999999886543
No 53
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.1e-33 Score=289.35 Aligned_cols=256 Identities=14% Similarity=0.131 Sum_probs=205.4
Q ss_pred eEEcccccccEEEEEEcc-CCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCC-CCCEEEEeeCCCcEE
Q 009569 265 LQILEAHSDEVWFLQFSH-DGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSP-NDHQLLTCGQEEAIR 342 (532)
Q Consensus 265 ~~~l~~h~~~V~~v~~s~-~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~ 342 (532)
.....+|...|+|++|+| ++++||+|+.||+|+|||+.++.. .....+.+|.+.|++++|+| ++.+|++|+.||+|+
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 345667999999999999 677999999999999999986543 34556778999999999998 689999999999999
Q ss_pred EEECCCCcEEEEeecc--CCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCC-EEEEE
Q 009569 343 RWDVNSGECLHVYEKT--GVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGK-RIISI 419 (532)
Q Consensus 343 iwd~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~ 419 (532)
+||++++........+ ...+.+++|+|++.+|++|+.||.|++||+++..+..+..+ ...|.+++|+|++. +++++
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h-~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMH-KKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCC-SSCEEEEEECTTCSSEEEEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecc-cceEEeeeecCCCceEEEEe
Confidence 9999876544333333 44578899999999999999999999999998776655544 45899999999876 78899
Q ss_pred ECCCeEEEEECCCCc-----eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccc----eEEE
Q 009569 420 CREAAILLLDREANF-----ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRA----RFVI 490 (532)
Q Consensus 420 ~~dg~I~iwd~~~~~-----~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~~~i 490 (532)
+.|+.|++||+++.. .....|...|++++|+|++++|++++.||.|++||+.++ .....+..|... ...+
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW-DCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS-SSEEEECCCCCCCCSSSCCC
T ss_pred cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC-ccceEEecccccccccceeE
Confidence 999999999998765 233568899999999999999999999999999999987 666666655421 1223
Q ss_pred EEccCCCCCcEEEEEe------------CCCcEEEEeCCCCCceee
Q 009569 491 RSCFGGFEQAFIASGS------------EDSQVNIFLSFSPFAKKI 524 (532)
Q Consensus 491 ~~~~~s~d~~~l~sgs------------~dg~i~iw~~~~~~~~~~ 524 (532)
...| +|++.++++++ .++.|++||..++.....
T Consensus 349 ~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~ 393 (435)
T 4e54_B 349 KAAW-HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQ 393 (435)
T ss_dssp BCEE-CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEE
T ss_pred EEEE-cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEE
Confidence 3444 66666666553 345799999998865443
No 54
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-33 Score=288.66 Aligned_cols=262 Identities=13% Similarity=0.145 Sum_probs=210.0
Q ss_pred CCCCcceeEEc-ccccccEEEEEEcc-CCCEEEEEeCCCeEEEEEeec---CCeeEEEEEeecCCCCeEEEEeCCCCCEE
Q 009569 258 NRIPSQTLQIL-EAHSDEVWFLQFSH-DGKYLASSSKDQSAIIWEVKE---DGQVSLKHRLSGHRKPVFTVSWSPNDHQL 332 (532)
Q Consensus 258 ~~~~~~~~~~l-~~h~~~V~~v~~s~-~g~~las~s~dg~i~iwd~~~---~~~~~~~~~~~~h~~~v~~l~~s~~~~~l 332 (532)
|....+++..+ ++|.+.|++++|+| ++++||+|+.||+|++||+.+ +........+ .|...|.+++|+|++++|
T Consensus 48 w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l 126 (437)
T 3gre_A 48 GNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAF 126 (437)
T ss_dssp GGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEE
T ss_pred ccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEE
Confidence 44557788888 89999999999999 999999999999999999976 3322222333 499999999999999999
Q ss_pred EEeeCCCcEEEEECC---CCcEEEEeec------------cCCceEEEE--EeeCCCeEEEEeCCCcEEEEECCCCeEEE
Q 009569 333 LTCGQEEAIRRWDVN---SGECLHVYEK------------TGVGLISCG--WFLDGGGIFAGMTDKSICLWDLDGRELES 395 (532)
Q Consensus 333 ~s~~~dg~i~iwd~~---~~~~~~~~~~------------~~~~i~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 395 (532)
++++.||.|++||+. +++....+.. +...+.++. +++++.++++|+.|+.|++||+++.....
T Consensus 127 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 206 (437)
T 3gre_A 127 AVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQ 206 (437)
T ss_dssp EEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeE
Confidence 999999999999994 5655544332 345566666 45789999999999999999998765544
Q ss_pred eecC--ccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eee-eecCCceeEEEEc----CCCCEEEEEecCCeEE
Q 009569 396 WKGQ--KTLRISDMAITDDGKRIISICREAAILLLDREANF--ERW-IEEEEVITSFSLS----KDNKYLLVNLINQEIH 466 (532)
Q Consensus 396 ~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~-~~~~~~i~~~~~s----p~~~~l~~~~~dg~i~ 466 (532)
.... +...|.+++|+|+++++++++.||.|++||++++. ..+ ..+..+|++++|+ |++.+|++++.||.|+
T Consensus 207 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~ 286 (437)
T 3gre_A 207 IIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLT 286 (437)
T ss_dssp EEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEE
T ss_pred EEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEE
Confidence 4433 55699999999999999999999999999999877 222 2677789999655 4688999999999999
Q ss_pred EEecCCCCcceeEEeccccceE------------------------EEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 467 LWSIESDPKLVSRYKGHKRARF------------------------VIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 467 iwd~~~~~~~~~~~~~~~~~~~------------------------~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
+||++++ +.+..+.+|...+. +..++| + ++.+|++|+.||.|++||+.++...
T Consensus 287 iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~-~-~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 287 IWNFVKG-HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISV-S-NDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp EEETTTT-EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEE-E-TTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred EEEcCCC-cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEE-C-CceEEEecCCCCeEEEEECCCcccc
Confidence 9999988 77777776643211 122344 4 5689999999999999999987654
Q ss_pred e
Q 009569 523 K 523 (532)
Q Consensus 523 ~ 523 (532)
.
T Consensus 364 ~ 364 (437)
T 3gre_A 364 K 364 (437)
T ss_dssp E
T ss_pred e
Confidence 4
No 55
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-32 Score=270.94 Aligned_cols=249 Identities=17% Similarity=0.263 Sum_probs=215.8
Q ss_pred eeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEE
Q 009569 264 TLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRR 343 (532)
Q Consensus 264 ~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~i 343 (532)
....+.+|.+.|++++|+|++++|++|+.||.|++||+.++ .....+.+|...|.+++|+|++++|++++.||.|++
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG---ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc---hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 34568899999999999999999999999999999999876 456778899999999999999999999999999999
Q ss_pred EECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCC-----CcEEEEECCCCe------------EEEeecCccC--ce
Q 009569 344 WDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTD-----KSICLWDLDGRE------------LESWKGQKTL--RI 404 (532)
Q Consensus 344 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~------------~~~~~~~~~~--~v 404 (532)
||+.+++++..+. +...+.+++|+|+++++++++.+ +.|++||++... ..... .+.. .+
T Consensus 101 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 178 (369)
T 3zwl_B 101 WDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII-THEGLDAA 178 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE-CCTTCCCE
T ss_pred EECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc-CCcCccce
Confidence 9999999998888 78889999999999999999998 999999986421 11111 1222 79
Q ss_pred EEEEEeeCCCEEEEEECCCeEEEEECCC-Cc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEe
Q 009569 405 SDMAITDDGKRIISICREAAILLLDREA-NF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYK 481 (532)
Q Consensus 405 ~~~~~s~~~~~l~~~~~dg~I~iwd~~~-~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 481 (532)
.+++|+|+++++++++.||.|++||+++ .. ..+..|...|.+++|+|++++|++++.||.|++||+.++ +.+..+.
T Consensus 179 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~ 257 (369)
T 3zwl_B 179 TVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL-QVLKKYE 257 (369)
T ss_dssp EEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEE
T ss_pred eEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC-ceeeeec
Confidence 9999999999999999999999999998 44 556678899999999999999999999999999999988 7777777
Q ss_pred ccccceEEEEEccCCCCCcEEEEEeCCC--------------cEEEEeCCCCCce
Q 009569 482 GHKRARFVIRSCFGGFEQAFIASGSEDS--------------QVNIFLSFSPFAK 522 (532)
Q Consensus 482 ~~~~~~~~i~~~~~s~d~~~l~sgs~dg--------------~i~iw~~~~~~~~ 522 (532)
+... +..++| +|++.++++++.++ .+++||..++...
T Consensus 258 -~~~~--~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 308 (369)
T 3zwl_B 258 -TDCP--LNTAVI-TPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI 308 (369)
T ss_dssp -CSSC--EEEEEE-CSSSSEEEEEECCC-------------CEEEEEETTTCCEE
T ss_pred -CCCC--ceeEEe-cCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch
Confidence 4444 334556 99999999999998 8999999887543
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.2e-34 Score=284.31 Aligned_cols=228 Identities=13% Similarity=0.162 Sum_probs=182.5
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.++.++.++.+.+|+..... .+++..+.+|.+.|++++|+|++++|++|+.|++|++||+.++........+.+|
T Consensus 25 ~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~ 99 (377)
T 3dwl_C 25 EFVTTTATNQVELYEQDGNG-----WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL 99 (377)
T ss_dssp EEECCCSSSCBCEEEEETTE-----EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCC
T ss_pred EEEEecCCCEEEEEEccCCc-----eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc
Confidence 34455567778888654310 1567788899999999999999999999999999999999876433456778889
Q ss_pred CCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCc---EEEEeec-cCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC--
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGE---CLHVYEK-TGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG-- 390 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~-- 390 (532)
...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.+++|+|+++++++++.|+.|++||++.
T Consensus 100 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 100 NRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp SSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSS
T ss_pred CCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecc
Confidence 9999999999999999999999999999999887 3677777 899999999999999999999999999999852
Q ss_pred ----------------CeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc------eeeeecCCceeEEE
Q 009569 391 ----------------RELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF------ERWIEEEEVITSFS 448 (532)
Q Consensus 391 ----------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~------~~~~~~~~~i~~~~ 448 (532)
+...... .+...|.+++|+|++++|++++.|+.|++||+.+.. ..+..|...|.+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 258 (377)
T 3dwl_C 180 VDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLL 258 (377)
T ss_dssp CC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEE
T ss_pred cCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEE
Confidence 2233333 556689999999999999999999999999998875 34567888999999
Q ss_pred EcCCCCEEEEEecCCeEEEEecC
Q 009569 449 LSKDNKYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 449 ~sp~~~~l~~~~~dg~i~iwd~~ 471 (532)
|+|++++|++++.++.+ +|+..
T Consensus 259 ~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 259 WANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEETTEEEEEESSSSEE-EECCC
T ss_pred EcCCCCEEEEEcCCcEE-EEEeC
Confidence 99999999999866655 77664
No 57
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.3e-33 Score=283.99 Aligned_cols=281 Identities=17% Similarity=0.249 Sum_probs=227.2
Q ss_pred ccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEcc-CCCEEEEEeCCCeEEEEEeecCCee----EEEEEee
Q 009569 240 HNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSH-DGKYLASSSKDQSAIIWEVKEDGQV----SLKHRLS 314 (532)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~-~g~~las~s~dg~i~iwd~~~~~~~----~~~~~~~ 314 (532)
.++.++.+.+|+....... ...+..+.+|.+.|++++|+| ++++|++|+.||+|++||+.+++.. .....+.
T Consensus 52 ~~~~~g~i~v~~~~~~~~~---~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~ 128 (402)
T 2aq5_A 52 EASGGGAFLVLPLGKTGRV---DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE 128 (402)
T ss_dssp CCSSSCCEEEEETTCCEEC---CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE
T ss_pred EEcCCCEEEEEECccCCCC---CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec
Confidence 4577888999975432211 234556789999999999999 9999999999999999999875321 2456778
Q ss_pred cCCCCeEEEEeCCCC-CEEEEeeCCCcEEEEECCCCcEEEEe--eccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCC
Q 009569 315 GHRKPVFTVSWSPND-HQLLTCGQEEAIRRWDVNSGECLHVY--EKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGR 391 (532)
Q Consensus 315 ~h~~~v~~l~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 391 (532)
+|...|.+++|+|++ .+|++++.|+.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.||.|++||++++
T Consensus 129 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 129 GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT
T ss_pred CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC
Confidence 999999999999998 69999999999999999999999999 789999999999999999999999999999999887
Q ss_pred eEEEee-cCccC-ceEEEEEeeCCCEEEEE---ECCCeEEEEECCCCc----eeeeecCCceeEEEEcCCCCEEEE-Eec
Q 009569 392 ELESWK-GQKTL-RISDMAITDDGKRIISI---CREAAILLLDREANF----ERWIEEEEVITSFSLSKDNKYLLV-NLI 461 (532)
Q Consensus 392 ~~~~~~-~~~~~-~v~~~~~s~~~~~l~~~---~~dg~I~iwd~~~~~----~~~~~~~~~i~~~~~sp~~~~l~~-~~~ 461 (532)
...... ..+.. .+.+++|+|++.+++++ +.|+.|++||+++.. .....+...+.+++|+|++++|++ ++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~ 288 (402)
T 2aq5_A 209 TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKG 288 (402)
T ss_dssp EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETT
T ss_pred ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcC
Confidence 665544 34433 48999999999999998 789999999998865 223356778999999999999975 557
Q ss_pred CCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCceeeec
Q 009569 462 NQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAKKIKY 526 (532)
Q Consensus 462 dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~~~~~ 526 (532)
||.|++||+.++...+..+..+.....+..++| +|++.++++ .|+.+++|++.++....+.+
T Consensus 289 dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~-sp~~~~~~s--~~~~~~~~~l~~~~~~~i~~ 350 (402)
T 2aq5_A 289 DSSIRYFEITSEAPFLHYLSMFSSKESQRGMGY-MPKRGLEVN--KCEIARFYKLHERKCEPIAM 350 (402)
T ss_dssp CSCEEEEEECSSTTCEEEEEEECCSSCCSEEEE-CCGGGSCGG--GTEEEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEecCCCcceEeecccccCCcccceEE-eccccccee--cceeEEEEEcCCCcEEEEEE
Confidence 999999999987333666665542222344666 899988764 56799999999876655533
No 58
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.7e-33 Score=281.32 Aligned_cols=253 Identities=11% Similarity=0.089 Sum_probs=215.6
Q ss_pred ceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCC---eeEEEEEeecCCCCeEEEEeCCC----C---CEE
Q 009569 263 QTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDG---QVSLKHRLSGHRKPVFTVSWSPN----D---HQL 332 (532)
Q Consensus 263 ~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~---~~~~~~~~~~h~~~v~~l~~s~~----~---~~l 332 (532)
.....+.+|.+.|++++|+| ++|++|+.||.|++|++.++. .......+.+|...|.+++|+|+ + .+|
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 45667889999999999999 899999999999999998764 01235667799999999999999 9 999
Q ss_pred EEeeCCCcEEEEECCCCcE-----EEEeecc-----CCceEEEEEe----eCCCe-EEEEeCCCcEEEEECCC------C
Q 009569 333 LTCGQEEAIRRWDVNSGEC-----LHVYEKT-----GVGLISCGWF----LDGGG-IFAGMTDKSICLWDLDG------R 391 (532)
Q Consensus 333 ~s~~~dg~i~iwd~~~~~~-----~~~~~~~-----~~~i~~~~~~----~~~~~-l~~~~~dg~i~iwd~~~------~ 391 (532)
++++.|+.|++||+.+++. ...+..| ...|.+++|+ |+++. +++++.||.|++||++. .
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 9999999999999998887 7888888 5899999999 99999 99999999999999976 3
Q ss_pred e-EE-----Eee------cCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeee---c---CCceeEEEEcC
Q 009569 392 E-LE-----SWK------GQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIE---E---EEVITSFSLSK 451 (532)
Q Consensus 392 ~-~~-----~~~------~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~---~---~~~i~~~~~sp 451 (532)
. +. .+. ..+...|.+++|+|++ ++++++.|+.|++||+++.. ..+.. | ...|.+++|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 2 22 332 3345589999999999 99999999999999999877 44455 6 88999999999
Q ss_pred CCCEEEEEecC---CeEEEEecCCCCcceeEEec-------------cccceEEEEEccCCCCCcEEEEEeCCCcEEEEe
Q 009569 452 DNKYLLVNLIN---QEIHLWSIESDPKLVSRYKG-------------HKRARFVIRSCFGGFEQAFIASGSEDSQVNIFL 515 (532)
Q Consensus 452 ~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~-------------~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~ 515 (532)
++++|++++.| |.|++||+.++ +.+..+.+ |...+.. ++| +|++++|++++.||.|++||
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~-~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMS--LSF-NDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTC-CEEEEECBC--------CCBSBSSCEEE--EEE-CSSSSEEEEEETTSEEEEEE
T ss_pred CCCEEEEEecCCCCceEEEEECCCC-cccceeccCcccccccccccccCCcEEE--EEE-CCCCCEEEEEeCCCeEEEEE
Confidence 99999999999 99999999988 88888988 8777444 566 89999999999999999999
Q ss_pred CCCCCce
Q 009569 516 SFSPFAK 522 (532)
Q Consensus 516 ~~~~~~~ 522 (532)
+.++...
T Consensus 320 ~~~~~~~ 326 (397)
T 1sq9_A 320 VKTKERI 326 (397)
T ss_dssp TTTTEEE
T ss_pred cCCCcee
Confidence 9987543
No 59
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.7e-32 Score=277.87 Aligned_cols=272 Identities=17% Similarity=0.250 Sum_probs=224.6
Q ss_pred HhcccccccccCCCCCceeeccCCccCCCCCcceeEE--cccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeE
Q 009569 231 DVQRDSCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQI--LEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVS 308 (532)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~ 308 (532)
.|...+ ++..+.++.+.+|+..+ +++.+. +.+|...|++++|+|+|++||+|+.||+|+|||+.++ +
T Consensus 112 ~wS~~n-~lAvgld~tV~lWd~~t-------g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~---~ 180 (420)
T 4gga_A 112 DWSSGN-VLAVALDNSVYLWSASS-------GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ---K 180 (420)
T ss_dssp EECTTS-EEEEEETTEEEEEETTT-------CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT---E
T ss_pred EECCCC-EEEEEeCCEEEEEECCC-------CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC---c
Confidence 344333 33445577888887554 344444 4578889999999999999999999999999999876 5
Q ss_pred EEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCC-cEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEE
Q 009569 309 LKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSG-ECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWD 387 (532)
Q Consensus 309 ~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 387 (532)
.+..+.+|...+.+++|+ +..|++|+.|+.+++||.... ..+..+..|...+..+.|+|++.++++++.|+.+++||
T Consensus 181 ~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEe
Confidence 667889999999998884 679999999999999999764 45678889999999999999999999999999999999
Q ss_pred CCCCe----EEEeecCccCceEEEEEeeCCC-EEEEE--ECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEE
Q 009569 388 LDGRE----LESWKGQKTLRISDMAITDDGK-RIISI--CREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVN 459 (532)
Q Consensus 388 ~~~~~----~~~~~~~~~~~v~~~~~s~~~~-~l~~~--~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~ 459 (532)
...+. .......+...|.+++|+|++. .++++ +.|+.|++||+.++. .....+...+.++.|+|+++.++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~ 338 (420)
T 4gga_A 259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISG 338 (420)
T ss_dssp SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEE
Confidence 97532 1223334455899999999665 55544 479999999999988 5556677789999999999999886
Q ss_pred e--cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 460 L--INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 460 ~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
+ .|+.|+|||+.++ +++.++.+|...+.. ++| +|||.+|+||+.||+|+|||+...
T Consensus 339 sg~~d~~I~iwd~~~~-~~v~~l~gH~~~V~~--l~~-spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 339 HGFAQNQLVIWKYPTM-AKVAELKGHTSRVLS--LTM-SPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp ECTTTCCEEEEETTTC-CEEEEECCCSSCEEE--EEE-CTTSSCEEEEETTTEEEEECCSCS
T ss_pred EecCCCEEEEEECCCC-cEEEEEcCCCCCEEE--EEE-cCCCCEEEEEecCCeEEEEECCCC
Confidence 5 6899999999998 899999999988544 566 999999999999999999999764
No 60
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1e-32 Score=272.14 Aligned_cols=251 Identities=12% Similarity=0.069 Sum_probs=213.6
Q ss_pred eEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCC-EEEEeeCCCcEEE
Q 009569 265 LQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDH-QLLTCGQEEAIRR 343 (532)
Q Consensus 265 ~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~~~dg~i~i 343 (532)
+....+|.+.|++++|+|++++|++++.|+.|++|++.++........+.+|...|.+++|+|+++ +|++++.||.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 344568999999999999999999999999999999997653334455668999999999999999 9999999999999
Q ss_pred EEC-CCCcEEEEeec--cCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC---------CeEEEeecCccCceEEEEEee
Q 009569 344 WDV-NSGECLHVYEK--TGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG---------RELESWKGQKTLRISDMAITD 411 (532)
Q Consensus 344 wd~-~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~v~~~~~s~ 411 (532)
||+ .+++. ..+.. |...|.+++|+| ++.+++++.|+.|++||+++ ........ +...|.+++|+|
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC
Confidence 999 87765 67778 999999999999 99999999999999999875 43333333 445899999999
Q ss_pred CCCEEEEEECCCeEEEEECCC-Cc----eeeeecCCceeEEEEcC-CCCEEEEEecCCeEEEEecCCC-----CcceeEE
Q 009569 412 DGKRIISICREAAILLLDREA-NF----ERWIEEEEVITSFSLSK-DNKYLLVNLINQEIHLWSIESD-----PKLVSRY 480 (532)
Q Consensus 412 ~~~~l~~~~~dg~I~iwd~~~-~~----~~~~~~~~~i~~~~~sp-~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~~ 480 (532)
++ +++++.|+.|++||+++ .. .....+...+.+++|+| +++++++++.||.|++|++... .+....+
T Consensus 161 ~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence 87 99999999999999998 44 34456788999999999 9999999999999999999876 3778888
Q ss_pred ecccc-------ceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 481 KGHKR-------ARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 481 ~~~~~-------~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
..|.. ...+..++| +|++++|++++.||.|++||+.++..
T Consensus 239 ~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 239 RCHRLNLKDTNLAYPVNSIEF-SPRHKFLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEE-CTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred ecccccccccccceeEEEEEE-cCCCCEEEEecCCceEEEEcCccHhH
Confidence 88865 112344566 99999999999999999999998764
No 61
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.9e-32 Score=272.32 Aligned_cols=251 Identities=13% Similarity=0.226 Sum_probs=211.9
Q ss_pred EEcccccccEEEEEEccC----CCEEEEEeCCCeEEEEEeecCCeeEEEEEee--cCCCCeEEEEeCCC----CCEEEEe
Q 009569 266 QILEAHSDEVWFLQFSHD----GKYLASSSKDQSAIIWEVKEDGQVSLKHRLS--GHRKPVFTVSWSPN----DHQLLTC 335 (532)
Q Consensus 266 ~~l~~h~~~V~~v~~s~~----g~~las~s~dg~i~iwd~~~~~~~~~~~~~~--~h~~~v~~l~~s~~----~~~l~s~ 335 (532)
...++|.++|++++|+|+ ...+++++.++.|++|++.++.......... .|...|.+++|+|+ +.+|++|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 345589999999999984 4566666677799999999776554544443 37789999999998 6799999
Q ss_pred eCCCcEEEEECCCCcEEEEeeccCCceEEEEEee-CCCeEEEEeCCCcEEEEECCCCeEEEee---cCccCceEEEEEee
Q 009569 336 GQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFL-DGGGIFAGMTDKSICLWDLDGRELESWK---GQKTLRISDMAITD 411 (532)
Q Consensus 336 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~~s~ 411 (532)
+.||.|++||+.+++.+..+..|...|.+++|+| ++.++++|+.||.|++||++++...... ..+...|.+++|+|
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 9999999999999999999999999999999999 8999999999999999999987766655 45666999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCc--eeee----------------------------ecCCceeEEEEcCCCCEEEEEec
Q 009569 412 DGKRIISICREAAILLLDREANF--ERWI----------------------------EEEEVITSFSLSKDNKYLLVNLI 461 (532)
Q Consensus 412 ~~~~l~~~~~dg~I~iwd~~~~~--~~~~----------------------------~~~~~i~~~~~sp~~~~l~~~~~ 461 (532)
+++++++++.|+.|++||+++.. ..+. .|...|.+++|+ ++++++++.
T Consensus 172 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~ 249 (366)
T 3k26_A 172 LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSC 249 (366)
T ss_dssp TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECS
T ss_pred CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEec
Confidence 99999999999999999998765 1111 288899999999 779999999
Q ss_pred CCeEEEEecCCCCc-------------ceeEEeccccceEEEEEccCCCC--CcEEEEEeCCCcEEEEeCCCCCc
Q 009569 462 NQEIHLWSIESDPK-------------LVSRYKGHKRARFVIRSCFGGFE--QAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 462 dg~i~iwd~~~~~~-------------~~~~~~~~~~~~~~i~~~~~s~d--~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
||.|++||+.+... .+..+.+|...+.. ++| +|+ +++|++|+.||.|++||+.++..
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~-s~~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWY--MRF-SMDFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSC--CCC-EECTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEE--EEE-cCCCCCcEEEEEecCCcEEEEECCCCCC
Confidence 99999999987622 26677777776444 445 778 99999999999999999998754
No 62
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.3e-33 Score=275.57 Aligned_cols=264 Identities=13% Similarity=0.172 Sum_probs=216.9
Q ss_pred CCCceeeccCCccCCCCCcceeE-EcccccccEEEEEEccC---CCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCC
Q 009569 244 DSDFSLYSDHQCGRNRIPSQTLQ-ILEAHSDEVWFLQFSHD---GKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKP 319 (532)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~l~~h~~~V~~v~~s~~---g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 319 (532)
++.+.+|+... .+... ...+|...|++++|+|+ +.+|++|+.||.|++||+.++. .....+.+|...
T Consensus 43 d~~v~iw~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~ 113 (357)
T 3i2n_A 43 TGVIQLYEIQH-------GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE--MPVYSVKGHKEI 113 (357)
T ss_dssp CEEEEEEEECS-------SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS--SCSEEECCCSSC
T ss_pred CcEEEEEeCCC-------CcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC--ccEEEEEecccc
Confidence 66778886543 22222 23379999999999998 7999999999999999998764 134667899999
Q ss_pred eEEEE------eCCCCCEEEEeeCCCcEEEEECCCCc-EEEEeeccCC----ceEEEE----EeeCCCeEEEEeCCCcEE
Q 009569 320 VFTVS------WSPNDHQLLTCGQEEAIRRWDVNSGE-CLHVYEKTGV----GLISCG----WFLDGGGIFAGMTDKSIC 384 (532)
Q Consensus 320 v~~l~------~s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~----~i~~~~----~~~~~~~l~~~~~dg~i~ 384 (532)
|.++. |+|++++|++++.|+.|++||+.+++ .+..+..+.. .+.+++ |+|+++++++++.||.|+
T Consensus 114 v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~ 193 (357)
T 3i2n_A 114 INAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIK 193 (357)
T ss_dssp EEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEE
T ss_pred eEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEE
Confidence 99995 57899999999999999999999887 6777765544 788888 678999999999999999
Q ss_pred EEECCCCeEEEeecCccCceEEEEEee---CCCEEEEEECCCeEEEEECCCCc--eee-----eecCCceeEEEEcCCCC
Q 009569 385 LWDLDGRELESWKGQKTLRISDMAITD---DGKRIISICREAAILLLDREANF--ERW-----IEEEEVITSFSLSKDNK 454 (532)
Q Consensus 385 iwd~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~I~iwd~~~~~--~~~-----~~~~~~i~~~~~sp~~~ 454 (532)
+||+++........+ ...|.+++|+| ++.++++++.||.|++||+++.. ..+ ..|...|++++|+|+++
T Consensus 194 i~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (357)
T 3i2n_A 194 LFDLRNMALRWETNI-KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR 272 (357)
T ss_dssp EEETTTTEEEEEEEC-SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE
T ss_pred EEECccCceeeecCC-CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC
Confidence 999998877555444 44899999999 99999999999999999998766 222 27899999999999998
Q ss_pred -EEEEEecCCeEEEEecCCCC------------------cceeEEeccccceEEEEEccCCCCCcEEE-EEeCCCcEEEE
Q 009569 455 -YLLVNLINQEIHLWSIESDP------------------KLVSRYKGHKRARFVIRSCFGGFEQAFIA-SGSEDSQVNIF 514 (532)
Q Consensus 455 -~l~~~~~dg~i~iwd~~~~~------------------~~~~~~~~~~~~~~~i~~~~~s~d~~~l~-sgs~dg~i~iw 514 (532)
++++++.||.|++||++... +.+..+.+|...+.. +.| +|++++|+ +++.||.|++|
T Consensus 273 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~--~~~-s~~~~~l~~s~~~d~~i~iw 349 (357)
T 3i2n_A 273 ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISS--LDW-SPDKRGLCVCSSFDQTVRVL 349 (357)
T ss_dssp EEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEE--EEE-CSSSTTEEEEEETTSEEEEE
T ss_pred cEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeE--EEE-cCCCCeEEEEecCCCcEEEE
Confidence 89999999999999998642 346678888887544 566 99999998 89999999999
Q ss_pred eCCCCC
Q 009569 515 LSFSPF 520 (532)
Q Consensus 515 ~~~~~~ 520 (532)
++.+..
T Consensus 350 ~~~~~~ 355 (357)
T 3i2n_A 350 IVTKLN 355 (357)
T ss_dssp EECC--
T ss_pred ECCCcc
Confidence 998753
No 63
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.3e-32 Score=273.31 Aligned_cols=256 Identities=15% Similarity=0.215 Sum_probs=212.3
Q ss_pred cceeEEcccccccEEEEEEcc-CCCEEEEEeCCCeEEEEEeecCCeeEEEEEe----------ecCCCCeEEEEeCC-CC
Q 009569 262 SQTLQILEAHSDEVWFLQFSH-DGKYLASSSKDQSAIIWEVKEDGQVSLKHRL----------SGHRKPVFTVSWSP-ND 329 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~-~g~~las~s~dg~i~iwd~~~~~~~~~~~~~----------~~h~~~v~~l~~s~-~~ 329 (532)
.+....+.+|.+.|++++|+| ++++||+|+.||.|++||+.++......... .+|...|.+++|+| ++
T Consensus 33 ~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 112 (408)
T 4a11_B 33 NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT 112 (408)
T ss_dssp CTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT
T ss_pred CcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC
Confidence 345667888999999999999 9999999999999999999865432222111 25999999999999 77
Q ss_pred CEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeC---CCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEE
Q 009569 330 HQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLD---GGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISD 406 (532)
Q Consensus 330 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 406 (532)
.+|++++.||.|++||+.+++....+. +...+.++.|+|. +.++++++.|+.|++||++++........+...|.+
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~ 191 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILA 191 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEE
T ss_pred cEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEE
Confidence 899999999999999999999888876 6777999999984 459999999999999999876655555556669999
Q ss_pred EEEeeCCC-EEEEEECCCeEEEEECCCCc---eee---------------eecCCceeEEEEcCCCCEEEEEecCCeEEE
Q 009569 407 MAITDDGK-RIISICREAAILLLDREANF---ERW---------------IEEEEVITSFSLSKDNKYLLVNLINQEIHL 467 (532)
Q Consensus 407 ~~~s~~~~-~l~~~~~dg~I~iwd~~~~~---~~~---------------~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i 467 (532)
++|+|++. .+++++.||.|++||+++.. ..+ ..|...|.+++|+|++++|++++.||.|++
T Consensus 192 ~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 271 (408)
T 4a11_B 192 VSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRL 271 (408)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEE
Confidence 99999998 58999999999999998754 111 467889999999999999999999999999
Q ss_pred EecCCCC----------------------------------------------cceeEEeccccceEEEEEccCCCCCcE
Q 009569 468 WSIESDP----------------------------------------------KLVSRYKGHKRARFVIRSCFGGFEQAF 501 (532)
Q Consensus 468 wd~~~~~----------------------------------------------~~~~~~~~~~~~~~~i~~~~~s~d~~~ 501 (532)
||+.++. +.+..+.+|...+.. ++| +|++.+
T Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~--~~~-s~~~~~ 348 (408)
T 4a11_B 272 WNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDC--CVF-QSNFQE 348 (408)
T ss_dssp EETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEE--EEE-ETTTTE
T ss_pred EECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEE--EEE-cCCCCE
Confidence 9987642 334556677777444 556 899999
Q ss_pred EEEEeCCCcEEEEeCCCCCc
Q 009569 502 IASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 502 l~sgs~dg~i~iw~~~~~~~ 521 (532)
|++|+.||.|++|++.+++.
T Consensus 349 l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 349 LYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEETTSCEEEEEECC---
T ss_pred EEEECCCCeEEEEeCCCCCc
Confidence 99999999999999998753
No 64
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.2e-32 Score=270.97 Aligned_cols=197 Identities=12% Similarity=0.050 Sum_probs=163.8
Q ss_pred CCeEEEEeCCCCCEEEEe--eCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECC-CCeEE
Q 009569 318 KPVFTVSWSPNDHQLLTC--GQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLD-GRELE 394 (532)
Q Consensus 318 ~~v~~l~~s~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~ 394 (532)
..+.+++|||||++++++ +.|++|+|||+.+++++..+. |...|.+++|+|+|+++++++.++ +.+|+.. +....
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIA 211 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEE
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCccee
Confidence 347889999999987654 478999999999999998886 667899999999999999998655 5555554 44433
Q ss_pred E-eecCccCceEEEEEeeCCCEEEEEECCC----eEEEEECCCCc------eeeeecCCceeEEEEcCCCCEEEEEecCC
Q 009569 395 S-WKGQKTLRISDMAITDDGKRIISICREA----AILLLDREANF------ERWIEEEEVITSFSLSKDNKYLLVNLINQ 463 (532)
Q Consensus 395 ~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg----~I~iwd~~~~~------~~~~~~~~~i~~~~~sp~~~~l~~~~~dg 463 (532)
. ....+...|.+++|+|+++.+++++.|+ .+++||+.... ..+..|...|++++|+|||++|++|+.|+
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 2 3344556899999999999999999887 68889987665 23456788999999999999999999999
Q ss_pred eEEEEecCCCCcceeEE-eccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 464 EIHLWSIESDPKLVSRY-KGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 464 ~i~iwd~~~~~~~~~~~-~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
.|+|||+.++ +++.++ .+|...++. ++| +|||++|+|||.|++|+||++....
T Consensus 292 ~V~iwd~~~~-~~~~~~~~gH~~~V~~--v~f-Spdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 292 SIALVKLKDL-SMSKIFKQAHSFAITE--VTI-SPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp CEEEEETTTT-EEEEEETTSSSSCEEE--EEE-CTTSCEEEEEETTSEEEEEECCTTT
T ss_pred EEEEEECCCC-cEEEEecCcccCCEEE--EEE-CCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 9999999998 777775 789988544 667 9999999999999999999997653
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-33 Score=281.17 Aligned_cols=264 Identities=12% Similarity=0.200 Sum_probs=227.1
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.++.++.++.+.+|+ ...+.+..+.+|...|++++|+|++++|++++.|+.|++||+.++ .....+..+
T Consensus 122 ~l~~~~~dg~i~i~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~ 190 (425)
T 1r5m_A 122 SIVTGVENGELRLWN--------KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISG---TVMQHFELK 190 (425)
T ss_dssp EEEEEETTSCEEEEE--------TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTT---EEEEEECCC
T ss_pred EEEEEeCCCeEEEEe--------CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCC---cEEEEeecc
Confidence 344555566677775 346778889999999999999999999999999999999999866 455666667
Q ss_pred CCC---------------eEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCC
Q 009569 317 RKP---------------VFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDK 381 (532)
Q Consensus 317 ~~~---------------v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 381 (532)
... +.++.|+|++ .+++++.++.|++||+.+++.+..+..|...|.+++|+|+++++++++.|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 269 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDG 269 (425)
T ss_dssp ---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred ccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 666 8999999875 588899999999999999999999999999999999999999999999999
Q ss_pred cEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEE
Q 009569 382 SICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVN 459 (532)
Q Consensus 382 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~ 459 (532)
.|++||+++.........+...|.+++|+|++ .+++++.|+.|++||+++.. ..+..|...|.+++|+|++++|+++
T Consensus 270 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 348 (425)
T 1r5m_A 270 TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVA 348 (425)
T ss_dssp CEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEE
T ss_pred EEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEE
Confidence 99999998765555555556699999999999 99999999999999999887 5556778899999999999999999
Q ss_pred ecCCeEEEEecCCCCc--------------------ceeEEecccc--ceEEEEEccCCCCCcEEEEEeCCCcEEEEeCC
Q 009569 460 LINQEIHLWSIESDPK--------------------LVSRYKGHKR--ARFVIRSCFGGFEQAFIASGSEDSQVNIFLSF 517 (532)
Q Consensus 460 ~~dg~i~iwd~~~~~~--------------------~~~~~~~~~~--~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~ 517 (532)
+.||.|++||+.+. . .+..+.+|.. . +..+.| +|++++|++++.||.|++|++.
T Consensus 349 ~~dg~i~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~-s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 349 FMDGQVNVYDLKKL-NSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDY--IFDLSW-NCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ETTSCEEEEECHHH-HC--------------CEECCEEEEECCTTCCCC--EEEEEE-CTTSSEEEEEESSSCCEEEECC
T ss_pred ECCCeEEEEECCCC-ccceeeeecccccccCcccchhhhhhcCcccCCc--eEEEEc-cCCCceEEEEecCceEEEEeec
Confidence 99999999999887 5 7888888866 5 344666 9999999999999999999986
No 66
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-32 Score=262.23 Aligned_cols=248 Identities=17% Similarity=0.235 Sum_probs=213.2
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcE
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAI 341 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i 341 (532)
.++...+.+|.+.|++++| |++++|++|+.||.|++||+.++ .....+..|...|.+++|+|++++|++++.|+.|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ---WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS---EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC---EEEEEeecCCccEEEEEECCCCCEEEEecCCCeE
Confidence 4678889999999999999 99999999999999999999765 4556777899999999999999999999999999
Q ss_pred EEEECCCC---cEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEee-CCCEEE
Q 009569 342 RRWDVNSG---ECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITD-DGKRII 417 (532)
Q Consensus 342 ~iwd~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 417 (532)
++|++... +.+..+..|...|.++.| +++.+++++.|+.|++|| .......+ ..+...+.+++|.| +++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNL-QAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEE-ECCSSCEEEEEEEETTTTEEE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEec-ccCCCceeEEEEccCCCCEEE
Confidence 99998654 567778889999999999 578999999999999999 33333344 44555899999999 899999
Q ss_pred EEECCCeEEEEECCCCceeeee-cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCC
Q 009569 418 SICREAAILLLDREANFERWIE-EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGG 496 (532)
Q Consensus 418 ~~~~dg~I~iwd~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s 496 (532)
+++.|+.|++||.......+.. +...+.+++|+|++. +++++.||.|++||++++ +.+..+.+|...+.. ++| +
T Consensus 160 ~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~--~~~-~ 234 (313)
T 3odt_A 160 TASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG-DVLRTYEGHESFVYC--IKL-L 234 (313)
T ss_dssp EEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC-CEEEEEECCSSCEEE--EEE-C
T ss_pred EEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch-hhhhhhhcCCceEEE--EEE-e
Confidence 9999999999995544444554 889999999999998 899999999999999988 889999999888554 555 8
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCCcee
Q 009569 497 FEQAFIASGSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 497 ~d~~~l~sgs~dg~i~iw~~~~~~~~~ 523 (532)
|++ .|++++.||.|++||+.++....
T Consensus 235 ~~~-~l~~~~~dg~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 235 PNG-DIVSCGEDRTVRIWSKENGSLKQ 260 (313)
T ss_dssp TTS-CEEEEETTSEEEEECTTTCCEEE
T ss_pred cCC-CEEEEecCCEEEEEECCCCceeE
Confidence 888 58899999999999999876443
No 67
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-34 Score=288.81 Aligned_cols=275 Identities=13% Similarity=0.213 Sum_probs=223.4
Q ss_pred ccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccC-CCEEEEEeCCCeEEEEEeecCC------eeEEE
Q 009569 238 LFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHD-GKYLASSSKDQSAIIWEVKEDG------QVSLK 310 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~-g~~las~s~dg~i~iwd~~~~~------~~~~~ 310 (532)
++.++.++.+.+|+..... ...+.+..+.+|.+.|++++|+|+ +++|++++.|+.|++||+.++. .....
T Consensus 82 l~~~~~dg~v~vw~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 158 (416)
T 2pm9_A 82 IAGALDNGSLELYSTNEAN---NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP 158 (416)
T ss_dssp EEEEESSSCEEEECCSSTT---SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC
T ss_pred EEEEccCCeEEEeeccccc---ccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccc
Confidence 4445556677777644311 112478889999999999999998 8999999999999999998764 22222
Q ss_pred EEeecCCCCeEEEEeCCC-CCEEEEeeCCCcEEEEECCCCcEEEEeecc------CCceEEEEEeeCC-CeEEEEeCCC-
Q 009569 311 HRLSGHRKPVFTVSWSPN-DHQLLTCGQEEAIRRWDVNSGECLHVYEKT------GVGLISCGWFLDG-GGIFAGMTDK- 381 (532)
Q Consensus 311 ~~~~~h~~~v~~l~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~~~~~dg- 381 (532)
..+..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+ ...+.+++|+|++ .++++++.|+
T Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 238 (416)
T 2pm9_A 159 GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN 238 (416)
T ss_dssp CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS
T ss_pred ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC
Confidence 345679999999999999 789999999999999999999999888876 7889999999997 6899999998
Q ss_pred --cEEEEECCCC-eEEEeec-CccCceEEEEEee-CCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCC-
Q 009569 382 --SICLWDLDGR-ELESWKG-QKTLRISDMAITD-DGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDN- 453 (532)
Q Consensus 382 --~i~iwd~~~~-~~~~~~~-~~~~~v~~~~~s~-~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~- 453 (532)
.|++||+++. ....... .+...|.+++|+| +++++++++.|+.|++||+++.+ ..+..|...|++++|+|++
T Consensus 239 ~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~ 318 (416)
T 2pm9_A 239 DPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAP 318 (416)
T ss_dssp SCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCT
T ss_pred CceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCC
Confidence 9999999864 3333333 4556899999999 99999999999999999999887 5666789999999999999
Q ss_pred CEEEEEecCCeEEEEecCCCCcceeEEec-----------------------------------cccceEEEEEccCCCC
Q 009569 454 KYLLVNLINQEIHLWSIESDPKLVSRYKG-----------------------------------HKRARFVIRSCFGGFE 498 (532)
Q Consensus 454 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----------------------------------~~~~~~~i~~~~~s~d 498 (532)
.+|++++.||.|++||+.+. ........ |...+ ..++| +|+
T Consensus 319 ~~l~s~~~d~~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-s~d 394 (416)
T 2pm9_A 319 DLFACASFDNKIEVQTLQNL-TNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPS--PAAHW-AFG 394 (416)
T ss_dssp TEEEECCSSSEEEEEESCCC-CCSSCC----------------------CCSCCCSSCCCCCSTTCCCS--CCCEE-ETT
T ss_pred CEEEEEecCCcEEEEEccCC-CCCcccccccccccCCcccccccccccccccccccccccCCccccCCc--cceEE-eeC
Confidence 89999999999999999876 22211110 22332 23556 999
Q ss_pred CcEEEEEeCCCcEEEEeCCCC
Q 009569 499 QAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 499 ~~~l~sgs~dg~i~iw~~~~~ 519 (532)
|++|++++.||.|+||++.+.
T Consensus 395 g~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 395 GKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp TEEECBCTTSSCBCCBCCCCC
T ss_pred CeEEEEeCCCCeEEEEEeccC
Confidence 999999999999999999874
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.4e-32 Score=277.65 Aligned_cols=268 Identities=17% Similarity=0.238 Sum_probs=217.2
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.++.++.++.+.+|+.. ..+....+.+|.+.|++++|+|++++|++|+.|+.|++||+.++. ....+.+|
T Consensus 111 ~l~~~~~dg~i~iwd~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~---~~~~~~~h 180 (420)
T 3vl1_A 111 RFILGTTEGDIKVLDSN-------FNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS---NPRTLIGH 180 (420)
T ss_dssp EEEEEETTSCEEEECTT-------SCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---CCEEEECC
T ss_pred EEEEEECCCCEEEEeCC-------CcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc---CceEEcCC
Confidence 34455667777777643 245677788999999999999999999999999999999998764 34667899
Q ss_pred CCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeec---cCCceEEEE---------------------EeeCCC
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEK---TGVGLISCG---------------------WFLDGG 372 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~i~~~~---------------------~~~~~~ 372 (532)
...|.+++|+|++++|++++.|+.|++||+++++.+..+.. +...+.+++ |+|+++
T Consensus 181 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK 260 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC
Confidence 99999999999999999999999999999999999988874 334455554 467889
Q ss_pred eEEEEeCCCcEEEEECCCCe-EEEeecCccCceEEEEEeeCCC-EEEEEECCCeEEEEECCCCc---eeeee-cCCceeE
Q 009569 373 GIFAGMTDKSICLWDLDGRE-LESWKGQKTLRISDMAITDDGK-RIISICREAAILLLDREANF---ERWIE-EEEVITS 446 (532)
Q Consensus 373 ~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~I~iwd~~~~~---~~~~~-~~~~i~~ 446 (532)
++++|+.||.|++||+++.. .......+...|.+++|+|++. ++++++.||.|++||+++.. ..+.. +...+.+
T Consensus 261 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~ 340 (420)
T 3vl1_A 261 YVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINN 340 (420)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEE
T ss_pred EEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceE
Confidence 99999999999999998754 4445455666899999999999 99999999999999999865 34444 6677888
Q ss_pred EEEcCCCCEEEEEecCCeEEEEecCCCCc--------ceeEEeccccceEEEEEccCCCCCc---EEEEEeCCCcEEEEe
Q 009569 447 FSLSKDNKYLLVNLINQEIHLWSIESDPK--------LVSRYKGHKRARFVIRSCFGGFEQA---FIASGSEDSQVNIFL 515 (532)
Q Consensus 447 ~~~sp~~~~l~~~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~~i~~~~~s~d~~---~l~sgs~dg~i~iw~ 515 (532)
+.+ +++++|++++.||.|++||+..... ....+.+|...+.. ++| +|++. .+++++.+|.+.+|+
T Consensus 341 ~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~-s~~~~~~g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 341 VYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQ--FCY-VSDDESNGEVLEVGKNNFCALYN 416 (420)
T ss_dssp EEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCE--EEE-ECCSSSSCEEEEEETTTEEEEEE
T ss_pred EEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEE--EEE-ccCCCCcceEEEEcCCceEEEEe
Confidence 855 5788999999999999999977411 12234556555443 566 88888 777888999999999
Q ss_pred CCC
Q 009569 516 SFS 518 (532)
Q Consensus 516 ~~~ 518 (532)
+++
T Consensus 417 ~~~ 419 (420)
T 3vl1_A 417 LSN 419 (420)
T ss_dssp SCC
T ss_pred ccC
Confidence 875
No 69
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.7e-31 Score=275.27 Aligned_cols=267 Identities=21% Similarity=0.332 Sum_probs=225.3
Q ss_pred ccccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeec
Q 009569 236 SCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSG 315 (532)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~ 315 (532)
..+++++.++.+.+|+..+ .+++..+.+|.+.|++++|+|++ +|++|+.||+|++||+.++ .....+.+
T Consensus 133 ~~l~sgs~dg~i~vwd~~~-------~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~---~~~~~~~~ 201 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSIN-------KKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG---CCTHVFEG 201 (464)
T ss_dssp TEEEEEETTSCEEEEETTT-------TEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT---EEEEEECC
T ss_pred CEEEEEcCCCcEEEEECCC-------CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC---cEEEEECC
Confidence 3556777888888887543 56788899999999999999988 9999999999999999876 46678889
Q ss_pred CCCCeEEEEeC--CCCCEEEEeeCCCcEEEEECCCCcE-----------------------EEEeeccCCceEEEEEeeC
Q 009569 316 HRKPVFTVSWS--PNDHQLLTCGQEEAIRRWDVNSGEC-----------------------LHVYEKTGVGLISCGWFLD 370 (532)
Q Consensus 316 h~~~v~~l~~s--~~~~~l~s~~~dg~i~iwd~~~~~~-----------------------~~~~~~~~~~i~~~~~~~~ 370 (532)
|...|.+++|+ +++.++++++.|+.|++||+.++.. +..+.+|...+.++ +++
T Consensus 202 h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~ 279 (464)
T 3v7d_B 202 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGH 279 (464)
T ss_dssp CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEE
T ss_pred CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCC
Confidence 99999999998 5789999999999999999987652 45667777777766 678
Q ss_pred CCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEE
Q 009569 371 GGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFS 448 (532)
Q Consensus 371 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~ 448 (532)
++++++|+.|+.|++||+++.........+...|.+++|+|+++++++++.|+.|++||++++. ..+..|...|.+++
T Consensus 280 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 359 (464)
T 3v7d_B 280 GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLR 359 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEE
Confidence 9999999999999999999877766666666799999999999999999999999999999887 56668999999999
Q ss_pred EcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCcee
Q 009569 449 LSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 449 ~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~~ 523 (532)
|+ +++|++++.||.|++||+.+. .....+. +...... .+| ++++.+|++|+ ||.|++||+.+++...
T Consensus 360 ~~--~~~l~s~s~dg~v~vwd~~~~-~~~~~~~-~~~~~~~--~~~-~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 360 LS--DKFLVSAAADGSIRGWDANDY-SRKFSYH-HTNLSAI--TTF-YVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp EC--SSEEEEEETTSEEEEEETTTC-CEEEEEE-CTTCCCE--EEE-EECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred Ec--CCEEEEEeCCCcEEEEECCCC-ceeeeec-CCCCccE--EEE-EeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 98 589999999999999999987 4444443 3333222 344 88999999998 9999999999987543
No 70
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.4e-32 Score=270.88 Aligned_cols=253 Identities=10% Similarity=0.132 Sum_probs=209.2
Q ss_pred cceeEEcccccccEEEEEEccCCCEE-EEEeC---CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCC---CCEEEE
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYL-ASSSK---DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPN---DHQLLT 334 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~l-as~s~---dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~---~~~l~s 334 (532)
......+++|.+.|++++|+|++..+ ++|+. |+.|++||+.++... . ....+|...|.+++|+|+ +.+|++
T Consensus 8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~-~-~~~~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLK-L-LREIEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEE-E-EEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred HHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccc-c-eeeecccCcEEEEEEcCCCCCCceEEE
Confidence 34455668899999999999999655 56665 999999999965422 2 223378999999999998 699999
Q ss_pred eeCCCcEEEEECCCCc-EEEEeeccCCceEEEEE------eeCCCeEEEEeCCCcEEEEECCCCe--EEEeecCc---cC
Q 009569 335 CGQEEAIRRWDVNSGE-CLHVYEKTGVGLISCGW------FLDGGGIFAGMTDKSICLWDLDGRE--LESWKGQK---TL 402 (532)
Q Consensus 335 ~~~dg~i~iwd~~~~~-~~~~~~~~~~~i~~~~~------~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~---~~ 402 (532)
++.||.|++||+.+++ .+..+..|...|.++.| +|+++++++++.||.|++||+++.. ...+..+. ..
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCC
T ss_pred ecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCC
Confidence 9999999999999988 88899999999999965 6789999999999999999998643 33333222 23
Q ss_pred ceEEEE----EeeCCCEEEEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcC---CCCEEEEEecCCeEEEEecCCCC
Q 009569 403 RISDMA----ITDDGKRIISICREAAILLLDREANF-ERWIEEEEVITSFSLSK---DNKYLLVNLINQEIHLWSIESDP 474 (532)
Q Consensus 403 ~v~~~~----~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp---~~~~l~~~~~dg~i~iwd~~~~~ 474 (532)
.+.+++ |+|+++++++++.|+.|++||+++.. .....+...|.+++|+| ++.++++++.||.|++||+++.
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~- 244 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ- 244 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE-
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC-
Confidence 788888 78899999999999999999999988 55677889999999999 9999999999999999999887
Q ss_pred cceeEEe-----ccccceEEEEEccCCCCCc-EEEEEeCCCcEEEEeCCCCC
Q 009569 475 KLVSRYK-----GHKRARFVIRSCFGGFEQA-FIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 475 ~~~~~~~-----~~~~~~~~i~~~~~s~d~~-~l~sgs~dg~i~iw~~~~~~ 520 (532)
+.+..+. +|...+.. +.| +|++. +|++++.||.|++||+.++.
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~--~~~-~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKSTVWQ--VRH-LPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp ETTTEEEEEEEECCSSCEEE--EEE-ETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred CcccceeeeccCCCcCCEEE--EEE-CCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 5655554 88877544 555 89988 89999999999999998654
No 71
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-32 Score=273.43 Aligned_cols=240 Identities=18% Similarity=0.294 Sum_probs=210.9
Q ss_pred ccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCc
Q 009569 271 HSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGE 350 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 350 (532)
|.+.|++++|+|++++|++|+.||.|++||.. + .....+..|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-G---ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT 182 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT-S---CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-C---CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc
Confidence 78899999999999999999999999999933 3 3567788999999999999999999999999999999999999
Q ss_pred EEEEeeccCCc---------------eEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCE
Q 009569 351 CLHVYEKTGVG---------------LISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKR 415 (532)
Q Consensus 351 ~~~~~~~~~~~---------------i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 415 (532)
.+..+..+... +.+++|+|++ .+++++.+|.|++||+++.........+...|.+++|+|++++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 261 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKL 261 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTE
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCE
Confidence 99988877766 8999999875 6889999999999999876555555556668999999999999
Q ss_pred EEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEc
Q 009569 416 IISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSC 493 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~ 493 (532)
+++++.|+.|++||+++.. ..+..|...|.+++|+|++ ++++++.|+.|++||+.++ +.+..+..|...+.. ++
T Consensus 262 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~--~~ 337 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN-TLLALSIVDGVPIFA--GR 337 (425)
T ss_dssp EEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT-EEEEEEECTTCCEEE--EE
T ss_pred EEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC-cEeEecccCCccEEE--EE
Confidence 9999999999999999877 5556788999999999999 9999999999999999988 888899988877544 55
Q ss_pred cCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 494 FGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 494 ~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
| +|++++|++++.||.|++|++.++.
T Consensus 338 ~-s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 338 I-SQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp E-CTTSSEEEEEETTSCEEEEECHHHH
T ss_pred E-cCCCCEEEEEECCCeEEEEECCCCc
Confidence 6 9999999999999999999998754
No 72
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-33 Score=290.07 Aligned_cols=274 Identities=9% Similarity=0.043 Sum_probs=207.8
Q ss_pred cccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccC------CCEEEEEeCCCeEEEEEeecCCee-----
Q 009569 239 FHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHD------GKYLASSSKDQSAIIWEVKEDGQV----- 307 (532)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~------g~~las~s~dg~i~iwd~~~~~~~----- 307 (532)
.+++.++.+.+|+..... ........+.+|.+.|++++|+|+ +.+||+|+.||+|++||+.++...
T Consensus 177 aS~s~D~tI~iWd~~~~~---~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~ 253 (524)
T 2j04_B 177 DKEKHSSCIQIFKMNTST---LHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK 253 (524)
T ss_dssp -----CEEEEEEEEETTT---CCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred ccCCCCceEEEEEccCCC---CCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce
Confidence 345677788888753321 111123456778999999999997 579999999999999999765321
Q ss_pred ---EEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCc-EEEEeeccCCceEEE--EEeeCC-CeEEEEeCC
Q 009569 308 ---SLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGE-CLHVYEKTGVGLISC--GWFLDG-GGIFAGMTD 380 (532)
Q Consensus 308 ---~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~d 380 (532)
.....+.+|...|.+++|+++ ..|++|+.||+|++||++++. +...+..|...|.++ .|+|++ .+|++|+.|
T Consensus 254 ~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 254 MCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp CCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred eecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC
Confidence 122467889999999999986 489999999999999998774 456688999999999 567777 899999999
Q ss_pred CcEEEEECCCCeEE-EeecCcc-CceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEE
Q 009569 381 KSICLWDLDGRELE-SWKGQKT-LRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYL 456 (532)
Q Consensus 381 g~i~iwd~~~~~~~-~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l 456 (532)
++|++||+++.... .+..+.. ..|.+++|+|++..+++++.|++|++||+++.. ..+.+|...|++++|+|++++|
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l 412 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMV 412 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBC
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeE
Confidence 99999999864321 2222221 248899999999999999999999999999876 5677899999999999999999
Q ss_pred EEEecCCeEEEEecCCCC-------------------------------------------cceeEEeccccceEEEEEc
Q 009569 457 LVNLINQEIHLWSIESDP-------------------------------------------KLVSRYKGHKRARFVIRSC 493 (532)
Q Consensus 457 ~~~~~dg~i~iwd~~~~~-------------------------------------------~~~~~~~~~~~~~~~i~~~ 493 (532)
++|+.||+|++||+.... ..+.++.+|...+.. ++
T Consensus 413 ~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~--Va 490 (524)
T 2j04_B 413 LAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITC--TK 490 (524)
T ss_dssp EEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCC--EE
T ss_pred EEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEE--EE
Confidence 999999999999864210 011223334444333 45
Q ss_pred cCCCCC---cEEEEEeCCCcEEEEeCCCC
Q 009569 494 FGGFEQ---AFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 494 ~~s~d~---~~l~sgs~dg~i~iw~~~~~ 519 (532)
| +|++ .++++|+.||.|+||++.-.
T Consensus 491 f-sp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 491 W-NETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp E-CCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred C-CCCCCccHHHHhhccCceEEEEEcccc
Confidence 6 8885 49999999999999998753
No 73
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.1e-32 Score=269.31 Aligned_cols=254 Identities=15% Similarity=0.262 Sum_probs=209.7
Q ss_pred CCCcceeEEcccccccEEEEEEccC---CCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEe
Q 009569 259 RIPSQTLQILEAHSDEVWFLQFSHD---GKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTC 335 (532)
Q Consensus 259 ~~~~~~~~~l~~h~~~V~~v~~s~~---g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~ 335 (532)
..|.+.+..+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+.+. .....+.+|...|.+++|+|++++|+++
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-TIPKAQQMHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-EEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-eeEEEeccccCCEEEEEECcCCCEEEEE
Confidence 4566788899999999999999998 69999999999999999986332 3446778899999999999999999999
Q ss_pred eCCCcEEEEECCCCcEEEEeeccCCceEEEEE--eeCCCeEEEEeCCCcEEEEECCCCeEEEeec---------------
Q 009569 336 GQEEAIRRWDVNSGECLHVYEKTGVGLISCGW--FLDGGGIFAGMTDKSICLWDLDGRELESWKG--------------- 398 (532)
Q Consensus 336 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--------------- 398 (532)
+.||.|++||+.+++.+. +..|...|.+++| +|++.++++++.||.|++||+++........
T Consensus 105 ~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMA 183 (368)
T ss_dssp ETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEE
T ss_pred cCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCee
Confidence 999999999999998776 4568999999999 8899999999999999999997543211111
Q ss_pred --------------------------CccCceEEEEEeeCCCE----EEEEECCCeEEEEECCCCc-----eeeeecCC-
Q 009569 399 --------------------------QKTLRISDMAITDDGKR----IISICREAAILLLDREANF-----ERWIEEEE- 442 (532)
Q Consensus 399 --------------------------~~~~~v~~~~~s~~~~~----l~~~~~dg~I~iwd~~~~~-----~~~~~~~~- 442 (532)
.....+.++++.++... +++++.|+.|++||++... ..+..|..
T Consensus 184 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 184 VVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp EEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred EEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecc
Confidence 11124556666665544 9999999999999998863 34444443
Q ss_pred -----------ceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcE
Q 009569 443 -----------VITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQV 511 (532)
Q Consensus 443 -----------~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i 511 (532)
.|++++|+|++++|++++.||.|++||+.++ +.+..+.+|...+.. ++| +|++.+|++++.|+..
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~--~~~-s~~g~~l~~~s~d~~~ 339 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR-TKLKTSEQLDQPISA--CCF-NHNGNIFAYASSYDWS 339 (368)
T ss_dssp ----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT-EEEEECCCCSSCEEE--EEE-CTTSSCEEEEECCCST
T ss_pred cccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC-cEEEEecCCCCCceE--EEE-CCCCCeEEEEeccccc
Confidence 7999999999999999999999999999988 888999999887544 566 9999999999999876
Q ss_pred EEEeCCC
Q 009569 512 NIFLSFS 518 (532)
Q Consensus 512 ~iw~~~~ 518 (532)
+.|++.+
T Consensus 340 ~~~~~~~ 346 (368)
T 3mmy_A 340 KGHEFYN 346 (368)
T ss_dssp TCGGGCC
T ss_pred ccccccC
Confidence 6666543
No 74
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=300.24 Aligned_cols=251 Identities=15% Similarity=0.289 Sum_probs=210.4
Q ss_pred eEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCC--CCEEEEeeCCCcEE
Q 009569 265 LQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPN--DHQLLTCGQEEAIR 342 (532)
Q Consensus 265 ~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~--~~~l~s~~~dg~i~ 342 (532)
+.++.+|.+.|++++|+|+|++|++|+.||+|++||+.++ .......+.+|..+|.+++|+|+ +++|++|+.||.|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~-~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT-EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC-CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 3568899999999999999999999999999999999843 44677888999999999999998 99999999999999
Q ss_pred EEECCCCc--EEEEeeccCCceEEEEEeeC--CCeEEEEeCCCcEEEEECCCC--eEEEeecCccCceEEEEEee-----
Q 009569 343 RWDVNSGE--CLHVYEKTGVGLISCGWFLD--GGGIFAGMTDKSICLWDLDGR--ELESWKGQKTLRISDMAITD----- 411 (532)
Q Consensus 343 iwd~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~----- 411 (532)
+||+.+++ .+..+..|...|.+++|+|+ ++.+++|+.||.|++||+++. ........+...|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 99999987 67778889999999999999 999999999999999999865 22222334455899999999
Q ss_pred --------CCCEEEEEECCCeEEEEECCCCc------eeeeecCCceeEEEEcCC---CCEEEEEecCCeEEEEecCCCC
Q 009569 412 --------DGKRIISICREAAILLLDREANF------ERWIEEEEVITSFSLSKD---NKYLLVNLINQEIHLWSIESDP 474 (532)
Q Consensus 412 --------~~~~l~~~~~dg~I~iwd~~~~~------~~~~~~~~~i~~~~~sp~---~~~l~~~~~dg~i~iwd~~~~~ 474 (532)
++..+++++.||.|++||+++.. ..+..|...|++++|+|+ ++++++++.||.|++||+.++.
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 58999999999999999998764 345578999999999999 8999999999999999998762
Q ss_pred c----ceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 475 K----LVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 475 ~----~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
. .+.....|...+. .++| +|++.+|++|+.||.|++|++.++
T Consensus 241 ~~~~~~~~~~~~~~~~v~--~l~~-spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 241 GPWKKTLLKEEKFPDVLW--RASW-SLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SCCBCCBSSSSCCSSCCC--CEEE-CTTTCCEEEECSSSCEECCBCCSS
T ss_pred CcceeEEeccCCCCCceE--EEEE-cCCCCEEEEEcCCCEEEEEecCCC
Confidence 1 2233344555543 3566 999999999999999999999853
No 75
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.6e-33 Score=283.72 Aligned_cols=275 Identities=11% Similarity=0.058 Sum_probs=207.6
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEcc-CCCEEEEEeCCCeEEEEEeecCCeeEEEEEeec
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSH-DGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSG 315 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~-~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~ 315 (532)
.+.+++.++.+.+|+-... .......+.+|.+.|++++|+| ++++|++|+.||+|++||+.++ ..........
T Consensus 134 ~lasGs~dg~i~lWd~~~~-----~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~~~~ 207 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIK-----DKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN-ILRVFASSDT 207 (435)
T ss_dssp CEEEEETTSCEEEECSSCC-----SCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC-EEEEEECCSS
T ss_pred EEEEEeCCCEEEEEECCCC-----CceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC-ceeEEeccCC
Confidence 3556777888888865432 1234556779999999999998 7899999999999999999753 3323333334
Q ss_pred CCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCC-eEEEEeCCCcEEEEECCCCeE-
Q 009569 316 HRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGG-GIFAGMTDKSICLWDLDGREL- 393 (532)
Q Consensus 316 h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~- 393 (532)
+...+.+++|+|++.+|++|+.||.|++||++ ++.+..+..|...|.+++|+|++. ++++|+.|+.|++||++....
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~ 286 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK 286 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS
T ss_pred CCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc
Confidence 45568899999999999999999999999986 456778889999999999999876 677899999999999976332
Q ss_pred --EEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecC------CceeEEEEcCCCCEEEEEe---
Q 009569 394 --ESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEE------EVITSFSLSKDNKYLLVNL--- 460 (532)
Q Consensus 394 --~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~------~~i~~~~~sp~~~~l~~~~--- 460 (532)
......|...|++++|+|+|.+|++++.|+.|++||+.++. ..+..|. ..+....|+|++.+++++.
T Consensus 287 ~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 366 (435)
T 4e54_B 287 ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPD 366 (435)
T ss_dssp SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCC
T ss_pred ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCC
Confidence 11223455689999999999999999999999999999876 3333332 1234567788777777664
Q ss_pred ---------cCCeEEEEecCCCCcceeEEe-ccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 461 ---------INQEIHLWSIESDPKLVSRYK-GHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 461 ---------~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
.++.|++||..++ +.+..+. +|...+..+ ..| +|+|.+|++|+ |+.|+||++++++.+
T Consensus 367 ~~~~~~~~~~~~~i~iwd~~~g-~~~~~l~~~~~~~v~s~-~~f-spdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 367 PNFKSCTPYELRTIDVFDGNSG-KMMCQLYDPESSGISSL-NEF-NPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp TTSCCSSTTCCCCEEEECSSSC-CEEEEECCSSCCCCCCE-EEE-CTTSSCEEEEC-SSEEEECCCC-----
T ss_pred CCeEEEEecCCCEEEEEECCCC-cEEEEEeCCCCCcEEEE-EEE-CCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 2357999999998 6776654 555554332 235 99999999876 889999999988653
No 76
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2e-31 Score=264.98 Aligned_cols=228 Identities=16% Similarity=0.313 Sum_probs=195.9
Q ss_pred ccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCC
Q 009569 238 LFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHR 317 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~ 317 (532)
++.++.++.+.+|........ ........+.+|.+.|.+++|+|++..|++|+.|++|++||+.++ .....+.+|.
T Consensus 121 lasg~~d~~i~v~~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~---~~~~~~~~h~ 196 (354)
T 2pbi_B 121 IACGGLDNKCSVYPLTFDKNE-NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG---QLLQSFHGHG 196 (354)
T ss_dssp EEEESTTSEEEEEECCCCTTC-CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC---CEEEEEECCS
T ss_pred EEEeeCCCCEEEEEEeccccc-cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEcCCC
Confidence 345566677777764332111 122455677889999999999999999999999999999999876 4567888999
Q ss_pred CCeEEEEeCC--CCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEE
Q 009569 318 KPVFTVSWSP--NDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELES 395 (532)
Q Consensus 318 ~~v~~l~~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 395 (532)
..|.+++|+| ++++|++|+.||+|++||+++++++..+..|...|.+++|+|++..|++|+.|++|++||++......
T Consensus 197 ~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~ 276 (354)
T 2pbi_B 197 ADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVA 276 (354)
T ss_dssp SCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 9999999988 46899999999999999999999999999999999999999999999999999999999998765544
Q ss_pred eecCc--cCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEe
Q 009569 396 WKGQK--TLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWS 469 (532)
Q Consensus 396 ~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd 469 (532)
....+ ...+.+++|+|++.++++++.|+.|++||+.++. ..+.+|...|++++|+|++++|++|+.||.|++|+
T Consensus 277 ~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 277 IYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 43322 2368999999999999999999999999998876 56678999999999999999999999999999996
No 77
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=284.23 Aligned_cols=252 Identities=9% Similarity=0.049 Sum_probs=200.0
Q ss_pred cceeEEcccccccEEEEEEccCC---------CEEEE-------------------EeCCCeEEEEEeecCCee-EEEEE
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDG---------KYLAS-------------------SSKDQSAIIWEVKEDGQV-SLKHR 312 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g---------~~las-------------------~s~dg~i~iwd~~~~~~~-~~~~~ 312 (532)
.+....+. +.+.|++++|+|++ ++||+ ++.|++|+||++.++... .....
T Consensus 124 ~r~~~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~ 202 (524)
T 2j04_B 124 KRRGFIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQT 202 (524)
T ss_dssp CSCEEEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEE
T ss_pred CcceEEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEE
Confidence 34444444 67788888888876 56666 557889999999865421 22345
Q ss_pred eecCCCCeEEEEeCCC------CCEEEEeeCCCcEEEEECCCCcE-----------EEEeeccCCceEEEEEeeCCCeEE
Q 009569 313 LSGHRKPVFTVSWSPN------DHQLLTCGQEEAIRRWDVNSGEC-----------LHVYEKTGVGLISCGWFLDGGGIF 375 (532)
Q Consensus 313 ~~~h~~~v~~l~~s~~------~~~l~s~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~i~~~~~~~~~~~l~ 375 (532)
+.+|.+.|.+++|+|+ +.+|++++.||+|++||+.++.. ...+.+|...|++++|+++ ..|+
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~la 281 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVV 281 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEE
Confidence 6778899999999996 57999999999999999987642 2367788899999999986 4899
Q ss_pred EEeCCCcEEEEECCCC-eEEEeecCccCceEEE--EEeeCC-CEEEEEECCCeEEEEECCCCc--eeeeecCC--ceeEE
Q 009569 376 AGMTDKSICLWDLDGR-ELESWKGQKTLRISDM--AITDDG-KRIISICREAAILLLDREANF--ERWIEEEE--VITSF 447 (532)
Q Consensus 376 ~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~--~~s~~~-~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~--~i~~~ 447 (532)
+|+.||+|++||+++. ........|...|.++ +|+|++ .+|++++.|++|++||+++.. ..+..|.. .|.++
T Consensus 282 sgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPV 361 (524)
T ss_dssp EEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCE
T ss_pred EEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccce
Confidence 9999999999999854 2223334455689999 578887 899999999999999998876 44455543 58899
Q ss_pred EEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 448 SLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 448 ~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
+|+|+++.+++++.|++|++||++++ ..+.++.+|...+.. ++| +|++++|++|+.||+|++|++...
T Consensus 362 ~fsp~~~~l~s~~~d~tv~lwd~~~~-~~~~~l~gH~~~V~s--va~-Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 362 VYCPQIYSYIYSDGASSLRAVPSRAA-FAVHPLVSRETTITA--IGV-SRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp EEETTTTEEEEECSSSEEEEEETTCT-TCCEEEEECSSCEEE--EEC-CSSCCBCEEEETTTEEECCBSCSS
T ss_pred EeCCCcCeEEEeCCCCcEEEEECccc-ccceeeecCCCceEE--EEe-CCCCCeEEEEECCCEEEEEechHh
Confidence 99999999999999999999999987 777889999988554 566 999999999999999999998654
No 78
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1e-30 Score=269.50 Aligned_cols=245 Identities=17% Similarity=0.304 Sum_probs=211.3
Q ss_pred ceeEEcccccccE-EEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcE
Q 009569 263 QTLQILEAHSDEV-WFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAI 341 (532)
Q Consensus 263 ~~~~~l~~h~~~V-~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i 341 (532)
.....+.+|.+.| .++.+ ++++|++|+.||+|++||+.++ +....+.+|.+.|.+++|+|++ +|++|+.||+|
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~---~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i 185 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK---KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTV 185 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCE
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC---cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCE
Confidence 3456788999885 55555 6789999999999999999876 5677888999999999999988 99999999999
Q ss_pred EEEECCCCcEEEEeeccCCceEEEEEee--CCCeEEEEeCCCcEEEEECCCCeE-----------------------EEe
Q 009569 342 RRWDVNSGECLHVYEKTGVGLISCGWFL--DGGGIFAGMTDKSICLWDLDGREL-----------------------ESW 396 (532)
Q Consensus 342 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~-----------------------~~~ 396 (532)
++||+++++++..+..|...|.+++|++ ++.++++|+.|+.|++||+++... ...
T Consensus 186 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 186 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred EEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 9999999999999999999999999995 778999999999999999986431 223
Q ss_pred ecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCC
Q 009569 397 KGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDP 474 (532)
Q Consensus 397 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~ 474 (532)
...+...|.++ +++++++++++.|+.|++||+++.. ..+..|...|.+++|+|+++++++|+.||.|++||+.++
T Consensus 266 ~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~- 342 (464)
T 3v7d_B 266 LRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG- 342 (464)
T ss_dssp ECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT-
T ss_pred ccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-
Confidence 33444466665 7789999999999999999999887 556678999999999999999999999999999999998
Q ss_pred cceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 475 KLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 475 ~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
+.+..+.+|...+.. +.| + +.+|++++.||.|++||+.++..
T Consensus 343 ~~~~~~~~h~~~v~~--~~~-~--~~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 343 ELMYTLQGHTALVGL--LRL-S--DKFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp EEEEEECCCSSCEEE--EEE-C--SSEEEEEETTSEEEEEETTTCCE
T ss_pred cEEEEEeCCCCcEEE--EEE-c--CCEEEEEeCCCcEEEEECCCCce
Confidence 899999999988554 444 3 68999999999999999998653
No 79
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-32 Score=276.53 Aligned_cols=275 Identities=14% Similarity=0.147 Sum_probs=213.2
Q ss_pred ccccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEee---cCCeeE----
Q 009569 236 SCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVK---EDGQVS---- 308 (532)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~---~~~~~~---- 308 (532)
..+++++.++.+.+|+........ ..+....+ +|.+.|++++|+|++++|++|+.||+|++||+. ++....
T Consensus 77 ~~l~s~s~dg~v~vwd~~~~~~~~-~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 154 (437)
T 3gre_A 77 PYLITGSDQGVIKIWNLKEIIVGE-VYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC 154 (437)
T ss_dssp CEEEEEETTSEEEEEEHHHHHTTC-CCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE
T ss_pred CEEEEecCCceEEEeECcccccCc-ccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc
Confidence 355666778888888754321111 12222333 499999999999999999999999999999995 332211
Q ss_pred -EEEEee--c--CCCCeEEEE--eCCCCCEEEEeeCCCcEEEEECCCCcEEEEeec--cCCceEEEEEeeCCCeEEEEeC
Q 009569 309 -LKHRLS--G--HRKPVFTVS--WSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEK--TGVGLISCGWFLDGGGIFAGMT 379 (532)
Q Consensus 309 -~~~~~~--~--h~~~v~~l~--~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~ 379 (532)
.+..+. . +...+.++. +++++.+|++++.|+.|++||+++++++..+.. |...|++++|+|+++++++|+.
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 234 (437)
T 3gre_A 155 ECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT 234 (437)
T ss_dssp EEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET
T ss_pred ceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC
Confidence 111111 2 566777777 668899999999999999999999999999988 7889999999999999999999
Q ss_pred CCcEEEEECCCCeEEEee-cCccCceEEEEEee----CCCEEEEEECCCeEEEEECCCCc--eeeee-------------
Q 009569 380 DKSICLWDLDGRELESWK-GQKTLRISDMAITD----DGKRIISICREAAILLLDREANF--ERWIE------------- 439 (532)
Q Consensus 380 dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~----~~~~l~~~~~dg~I~iwd~~~~~--~~~~~------------- 439 (532)
||.|++||++.+...... ..+...|.+++|+| ++.++++++.|+.|++||++++. ..+..
T Consensus 235 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (437)
T 3gre_A 235 RGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPI 314 (437)
T ss_dssp TSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCB
T ss_pred CCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccc
Confidence 999999999987665443 24445899996664 67799999999999999998776 22221
Q ss_pred -------------cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEec------------------------
Q 009569 440 -------------EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKG------------------------ 482 (532)
Q Consensus 440 -------------~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------------------ 482 (532)
|...|++++|+ ++++|++++.||.|++||+.++ +.+..+.+
T Consensus 315 ~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (437)
T 3gre_A 315 EKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNEL-SSSKAVISPSRFSDVFIPTQVTANLTMLLRKM 392 (437)
T ss_dssp CSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG-GGCEEEECC--CCCEEEEEEEETTEEEEEEEC
T ss_pred ccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCc-ccceEEecccccCceEEEEEeecceEEEEEec
Confidence 55668999999 7899999999999999999988 77777765
Q ss_pred -------------cccceEEEEEccCCCCCcEEEEEeCCCcEEEEe
Q 009569 483 -------------HKRARFVIRSCFGGFEQAFIASGSEDSQVNIFL 515 (532)
Q Consensus 483 -------------~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~ 515 (532)
|...+..+.+.. .+++.+|++|+.||.|+||+
T Consensus 393 ~~~~~~~~~~~~~h~~~I~~i~~~~-~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 393 KRTSTHSVDDSLYHHDIINSISTCE-VDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp C-------------CCCEEEEEEEE-SSSSEEEEEEETTSCEEEEC
T ss_pred ccccccccCcccccccceeeEeeec-cCCceEEEEEcCCceEEEeC
Confidence 566655544433 23488999999999999995
No 80
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.8e-31 Score=256.62 Aligned_cols=272 Identities=17% Similarity=0.252 Sum_probs=223.0
Q ss_pred HhcccccccccCCCCCceeeccCCccCCCCCcceeEEc--ccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeE
Q 009569 231 DVQRDSCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQIL--EAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVS 308 (532)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~ 308 (532)
.|.... ++..+.|+.+.+|+..+ .++++.+ .+|...|++++|+|++++||+|+.||+|++|++.++ +
T Consensus 32 ~WS~~~-~lAvg~D~tV~iWd~~t-------g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~---~ 100 (318)
T 4ggc_A 32 DWSSGN-VLAVALDNSVYLWSASS-------GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ---K 100 (318)
T ss_dssp EECTTS-EEEEEETTEEEEEETTT-------CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT---E
T ss_pred EECCCC-EEEEEeCCEEEEEECCC-------CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc---e
Confidence 344443 33445577888887543 4555544 578889999999999999999999999999999876 5
Q ss_pred EEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCC-cEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEE
Q 009569 309 LKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSG-ECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWD 387 (532)
Q Consensus 309 ~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 387 (532)
.+..+.+|...+.++.+ ++..+++++.++.+++|+..++ ..+..+..|...+..+.++++++++++++.|+.|++||
T Consensus 101 ~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp EEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence 66778899998887665 5679999999999999999776 45677888999999999999999999999999999999
Q ss_pred CCCCe----EEEeecCccCceEEEEEeeCCCEE---EEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEE
Q 009569 388 LDGRE----LESWKGQKTLRISDMAITDDGKRI---ISICREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVN 459 (532)
Q Consensus 388 ~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l---~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~ 459 (532)
++++. .......+...|.+++++|++..+ ++++.++.|++||..... .....+...+..+.|+|++..++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 258 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISG 258 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEE
Confidence 97632 122233344589999999976533 355678999999998887 6667788889999999999988876
Q ss_pred e--cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 460 L--INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 460 ~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
+ .|+.|++||+.++ +++.++.+|...+.. ++| +|++++|+||+.||+|+|||+.+.
T Consensus 259 sg~~d~~i~iwd~~~~-~~~~~l~gH~~~V~~--l~~-spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 259 HGFAQNQLVIWKYPTM-AKVAELKGHTSRVLS--LTM-SPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp ECTTTCCEEEEETTTC-CEEEEECCCSSCEEE--EEE-CTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEcCCCEEEEEECCCC-cEEEEEcCCCCCEEE--EEE-cCCCCEEEEEecCCeEEEEECCCC
Confidence 5 7899999999998 899999999988554 566 999999999999999999998763
No 81
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.3e-31 Score=270.20 Aligned_cols=259 Identities=19% Similarity=0.333 Sum_probs=217.4
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.+++++.++.+.+|+..+ .+....+.+|.+.|++++| ++++|++|+.||+|++||+.++ .....+.+|
T Consensus 145 ~l~~g~~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~h 212 (435)
T 1p22_A 145 KIVSGLRDNTIKIWDKNT-------LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG---EMLNTLIHH 212 (435)
T ss_dssp EEEEEESSSCEEEEESSS-------CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC---CEEEEECCC
T ss_pred EEEEEeCCCeEEEEeCCC-------CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC---cEEEEEcCC
Confidence 445666777888886543 5678889999999999999 7899999999999999999876 456778899
Q ss_pred CCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEE---EEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeE
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECL---HVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGREL 393 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 393 (532)
...|.+++|++ .++++|+.||.|++||+.++... ..+.+|...|.+++| +++++++|+.||.|++||+++...
T Consensus 213 ~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 213 CEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp CSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence 99999999974 59999999999999999988765 667789999999998 788999999999999999998766
Q ss_pred EEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecC
Q 009569 394 ESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 394 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~ 471 (532)
......+...|.+++++ +.++++++.||.|++||++++. ..+..|...|.+++| ++.+|++|+.||.|++||+.
T Consensus 289 ~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 289 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp EEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHH
T ss_pred EEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECC
Confidence 66555666689999884 6799999999999999999887 566678999999999 78899999999999999997
Q ss_pred CCCc---------ceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 472 SDPK---------LVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 472 ~~~~---------~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
+. . .+..+.+|...+.. +.| ++.+|++|+.||.|++||+.++..
T Consensus 365 ~~-~~~~~~~~~~~~~~~~~h~~~v~~--l~~---~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 365 AA-LDPRAPAGTLCLRTLVEHSGRVFR--LQF---DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp HH-TSTTSCTTTTEEEEECCCSSCCCC--EEE---CSSCEEECCSSSEEEEEC------
T ss_pred CC-CCccccccchheeeccCCCCCeEE--EEe---CCCEEEEEeCCCEEEEEECCCCCC
Confidence 65 3 67888999887655 333 678899999999999999988653
No 82
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.5e-31 Score=271.51 Aligned_cols=250 Identities=17% Similarity=0.295 Sum_probs=210.0
Q ss_pred EEcccccccEEEEEEccC-CCEEEEEeCCCeEEEEEeecC-------CeeEEEEEeecCCCCeEEEEeCCCCC-EEEEee
Q 009569 266 QILEAHSDEVWFLQFSHD-GKYLASSSKDQSAIIWEVKED-------GQVSLKHRLSGHRKPVFTVSWSPNDH-QLLTCG 336 (532)
Q Consensus 266 ~~l~~h~~~V~~v~~s~~-g~~las~s~dg~i~iwd~~~~-------~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~~ 336 (532)
....+|.+.|++++|+|+ +.+||+++.||.|++|++.+. +.......+.+|...|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 455679999999999997 789999999999999999851 12345677889999999999999988 999999
Q ss_pred CCCcEEEEECCCCcE-------EEEeeccCCceEEEEEee-CCCeEEEEeCCCcEEEEECCCC----eEEEeecCccCce
Q 009569 337 QEEAIRRWDVNSGEC-------LHVYEKTGVGLISCGWFL-DGGGIFAGMTDKSICLWDLDGR----ELESWKGQKTLRI 404 (532)
Q Consensus 337 ~dg~i~iwd~~~~~~-------~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~v 404 (532)
.||.|++||+.++.. ...+..|...|.+++|+| ++..|++++.||.|++||+++. ....+. .+...|
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v 280 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTAEV 280 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSSCE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCCCCe
Confidence 999999999987422 456678899999999999 6788999999999999999864 333333 455589
Q ss_pred EEEEEeeCCC-EEEEEECCCeEEEEECCCCc---eeeeecCCceeEEEEcCCCC-EEEEEecCCeEEEEecCCCC-----
Q 009569 405 SDMAITDDGK-RIISICREAAILLLDREANF---ERWIEEEEVITSFSLSKDNK-YLLVNLINQEIHLWSIESDP----- 474 (532)
Q Consensus 405 ~~~~~s~~~~-~l~~~~~dg~I~iwd~~~~~---~~~~~~~~~i~~~~~sp~~~-~l~~~~~dg~i~iwd~~~~~----- 474 (532)
++++|+|++. ++++++.||.|++||+++.. ..+..|...|++++|+|+++ +|++++.||.|++||+....
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 9999999987 68899999999999999843 56667899999999999985 68999999999999998721
Q ss_pred --------cceeEEeccccceEEEEEccCCCCCc-EEEEEeCCCcEEEEeCCCC
Q 009569 475 --------KLVSRYKGHKRARFVIRSCFGGFEQA-FIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 475 --------~~~~~~~~~~~~~~~i~~~~~s~d~~-~l~sgs~dg~i~iw~~~~~ 519 (532)
.++..+.+|...+.. +.| +|++. +|++++.||.|+||++...
T Consensus 361 ~~~~~~~~~~~~~~~~h~~~v~~--~~~-~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 361 EDAEDGPPELLFIHGGHTAKISD--FSW-NPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHHCCTTEEEECCCCSSCEEE--EEE-CSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccccCCcceEEEcCCCCCCceE--EEE-CCCCCCEEEEEECCCCEEEeEcccc
Confidence 456677788777444 556 89998 9999999999999999764
No 83
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-30 Score=255.72 Aligned_cols=230 Identities=18% Similarity=0.305 Sum_probs=198.8
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
.+++++.|+.+.+|+.... ......++..+.+|...|++++|+|+|++|++|+.|++|++||+.++ +....+.+|
T Consensus 32 ~l~s~s~D~~v~~W~~~~~--~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~---~~~~~~~~h 106 (319)
T 3frx_A 32 LLLSASRDKTLISWKLTGD--DQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATG---ETYQRFVGH 106 (319)
T ss_dssp EEEEEETTSEEEEEEEEEE--TTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---EEEEEEECC
T ss_pred EEEEecCCccEEEecCCCC--CccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCC---CeeEEEccC
Confidence 4667788888888864321 11123567789999999999999999999999999999999999876 466788899
Q ss_pred CCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeC------CCeEEEEeCCCcEEEEECCC
Q 009569 317 RKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLD------GGGIFAGMTDKSICLWDLDG 390 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~dg~i~iwd~~~ 390 (532)
...|.+++|+|++.+|++|+.|++|++||++ +.++..+.+|...|.++.|+|. +..+++++.|+.|++||+++
T Consensus 107 ~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 185 (319)
T 3frx_A 107 KSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ 185 (319)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc
Confidence 9999999999999999999999999999996 5678888899999999999984 45899999999999999998
Q ss_pred CeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEe
Q 009569 391 RELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWS 469 (532)
Q Consensus 391 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd 469 (532)
.........|...|.+++|+|++++|++++.|+.|++||+.+.+ .....+...|.+++|+|++.++++++ ++.+++|+
T Consensus 186 ~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~-~~~i~v~~ 264 (319)
T 3frx_A 186 FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAAT-ATGIKVFS 264 (319)
T ss_dssp TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEE-TTEEEEEE
T ss_pred chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEc-CCCcEEEE
Confidence 77766666677799999999999999999999999999999887 44455667899999999999999887 45699999
Q ss_pred cCCC
Q 009569 470 IESD 473 (532)
Q Consensus 470 ~~~~ 473 (532)
+...
T Consensus 265 ~~~~ 268 (319)
T 3frx_A 265 LDPQ 268 (319)
T ss_dssp ETTE
T ss_pred eCcC
Confidence 8754
No 84
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.7e-31 Score=302.28 Aligned_cols=248 Identities=19% Similarity=0.345 Sum_probs=222.2
Q ss_pred eeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEE
Q 009569 264 TLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRR 343 (532)
Q Consensus 264 ~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~i 343 (532)
....+.+|.+.|++++|+|+|++||+|+.||+|++||+.++ .....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~---~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG---EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKI 683 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC---CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Confidence 44567899999999999999999999999999999999876 456778899999999999999999999999999999
Q ss_pred EECCCCcEEEEeeccCCceEEEEEee--CCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC
Q 009569 344 WDVNSGECLHVYEKTGVGLISCGWFL--DGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR 421 (532)
Q Consensus 344 wd~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 421 (532)
||+.+++++..+..|...|.+++|+| ++..+++|+.|+.|++||++++........|...|.+++|+|+++++++++.
T Consensus 684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEES
T ss_pred EECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEEC
Confidence 99999999999999999999999999 5568999999999999999987766666667779999999999999999999
Q ss_pred CCeEEEEECCCCc--ee-------------------------------------------------------eeecCCce
Q 009569 422 EAAILLLDREANF--ER-------------------------------------------------------WIEEEEVI 444 (532)
Q Consensus 422 dg~I~iwd~~~~~--~~-------------------------------------------------------~~~~~~~i 444 (532)
||.|++||+.+.. .. ...|...|
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 9999999987653 00 01456789
Q ss_pred eEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 445 TSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 445 ~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
.+++|+|+++++++++.||.|++||+.++ ..+..+.+|...+.. +.| +|++.+|++++.||.|++|++.+
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~h~~~v~~--v~~-spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSR-LKVADCRGHLSWVHG--VMF-SPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTT-EEEEEECCCSSCEEE--EEE-CTTSSEEEEEETTSCEEEEEHHH
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceeeecCCCccceEE--EEE-CCCCCEEEEEeCCCeEEEEEccc
Confidence 99999999999999999999999999988 888999999988554 556 89999999999999999999754
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.4e-30 Score=300.46 Aligned_cols=254 Identities=20% Similarity=0.282 Sum_probs=210.2
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCC--CCCEEEEeeCCC
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSP--NDHQLLTCGQEE 339 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~--~~~~l~s~~~dg 339 (532)
.+.+..+.+|.+.|++++|+|+|++||+|+.||+|++||+.++ .....+.+|...|.+++|+| ++.++++|+.|+
T Consensus 647 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 647 GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG---KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC---ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence 5678889999999999999999999999999999999999876 45677889999999999999 556899999999
Q ss_pred cEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEE------------------------
Q 009569 340 AIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELES------------------------ 395 (532)
Q Consensus 340 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~------------------------ 395 (532)
.|++||+.+++++..+.+|...|.+++|+|+++++++++.||.|++||+++.....
T Consensus 724 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 724 FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp CEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCC
T ss_pred eEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEE
Confidence 99999999999999999999999999999999999999999999999986543211
Q ss_pred -------------------------------eecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCC
Q 009569 396 -------------------------------WKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEE 442 (532)
Q Consensus 396 -------------------------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~ 442 (532)
....+...|.+++|+|++.++++++.|+.|++||+.++. ..+..|..
T Consensus 804 ~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~ 883 (1249)
T 3sfz_A 804 CSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLS 883 (1249)
T ss_dssp CCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSS
T ss_pred EEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCcc
Confidence 111344578888888888888888888888888888776 45566777
Q ss_pred ceeEEEEcCCCCEEEEEecCCeEEEEecC---------------------------------------------------
Q 009569 443 VITSFSLSKDNKYLLVNLINQEIHLWSIE--------------------------------------------------- 471 (532)
Q Consensus 443 ~i~~~~~sp~~~~l~~~~~dg~i~iwd~~--------------------------------------------------- 471 (532)
.|++++|+|+++++++++.||.|++||+.
T Consensus 884 ~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1249)
T 3sfz_A 884 WVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQ 963 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSC
T ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCc
Confidence 78888888888888888878877777753
Q ss_pred ----------------------------CCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 472 ----------------------------SDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 472 ----------------------------~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
++ ..+..+.+|...+.. +.| +|++++|++++.||.|++|++.++...
T Consensus 964 i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~-~~~~~~~~h~~~v~~--l~~-s~dg~~l~s~~~dg~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 964 VSCCCLSPHLEYVAFGDEDGAIKIIELPNN-RVFSSGVGHKKAVRH--IQF-TADGKTLISSSEDSVIQVWNWQTGDYV 1038 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCCEEEETTTT-SCEEECCCCSSCCCC--EEE-CSSSSCEEEECSSSBEEEEETTTTEEE
T ss_pred EEEEEEcCCCCEEEEEcCCCCEEEEEcCCC-ceeeecccCCCceEE--EEE-CCCCCEEEEEcCCCEEEEEECCCCceE
Confidence 22 333445556665433 455 899999999999999999999987543
No 86
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.7e-31 Score=258.64 Aligned_cols=261 Identities=10% Similarity=0.084 Sum_probs=217.9
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCC-EEEEEeCCCeEEEEEe-ecCCeeEEEEEee
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGK-YLASSSKDQSAIIWEV-KEDGQVSLKHRLS 314 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~-~las~s~dg~i~iwd~-~~~~~~~~~~~~~ 314 (532)
.++.++.++.+.+|+..... +......+.+|...|++++|+|+++ +|++|+.||.|++||+ .++. ...+.
T Consensus 25 ~l~~~~~d~~v~iw~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~----~~~~~ 96 (342)
T 1yfq_A 25 LLLITSWDGSLTVYKFDIQA----KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS----FQALT 96 (342)
T ss_dssp EEEEEETTSEEEEEEEETTT----TEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS----EEECB
T ss_pred EEEEEcCCCeEEEEEeCCCC----ccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc----eEecc
Confidence 45566778888888754321 1123455668999999999999999 9999999999999999 7552 26677
Q ss_pred c--CCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCC---------CcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcE
Q 009569 315 G--HRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNS---------GECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSI 383 (532)
Q Consensus 315 ~--h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 383 (532)
+ |...|.+++|+| +.+|++++.|+.|++||+++ ++++..+. +...+.+++|+|++ +++++.|+.|
T Consensus 97 ~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i 172 (342)
T 1yfq_A 97 NNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQV 172 (342)
T ss_dssp SCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEE
T ss_pred ccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeE
Confidence 8 999999999999 99999999999999999987 77666666 78889999999887 9999999999
Q ss_pred EEEECCC-C--eEEEeecCccCceEEEEEee-CCCEEEEEECCCeEEEEECCCC------c--eeeeecCC---------
Q 009569 384 CLWDLDG-R--ELESWKGQKTLRISDMAITD-DGKRIISICREAAILLLDREAN------F--ERWIEEEE--------- 442 (532)
Q Consensus 384 ~iwd~~~-~--~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~I~iwd~~~~------~--~~~~~~~~--------- 442 (532)
++||+++ . ........+...|.+++|+| +++++++++.||.|++||++.. . ..+..|..
T Consensus 173 ~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (342)
T 1yfq_A 173 QWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252 (342)
T ss_dssp EEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCC
T ss_pred EEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccce
Confidence 9999987 3 23344445556899999999 9999999999999999999876 3 44555544
Q ss_pred ceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEecc-ccceEEEEEccCCCCCcEEEEEeCCCc-EEEEe
Q 009569 443 VITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGH-KRARFVIRSCFGGFEQAFIASGSEDSQ-VNIFL 515 (532)
Q Consensus 443 ~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~i~~~~~s~d~~~l~sgs~dg~-i~iw~ 515 (532)
.|.+++|+|++++|++++.||.|++||+.++ +.+..+.+| ...+..+. |++.+|++++.||. .+.|.
T Consensus 253 ~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~h~~~v~~~~-----~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTR-KKIKNFAKFNEDSVVKIA-----CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTT-EEEEECCCCSSSEEEEEE-----ECSSEEEEEEECTHHHHCSS
T ss_pred eEEEEEEcCCCCEEEEecCCceEEEEcCccH-hHhhhhhcccCCCceEec-----CCCCeEEEEecCCccccccc
Confidence 8999999999999999999999999999988 888899988 77654433 89999999999998 55555
No 87
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.3e-29 Score=259.87 Aligned_cols=262 Identities=19% Similarity=0.396 Sum_probs=225.3
Q ss_pred ccccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeec
Q 009569 236 SCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSG 315 (532)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~ 315 (532)
..+++++.++.+.+|+..+ .+++..+.+|.+.|++++|+ ++++++|+.||+|++||+.++ .....+.+
T Consensus 130 ~~l~sg~~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~---~~~~~~~~ 197 (445)
T 2ovr_B 130 NRIVSGSDDNTLKVWSAVT-------GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG---ECIHTLYG 197 (445)
T ss_dssp TEEEEEETTSCEEEEETTT-------CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT---EEEEEECC
T ss_pred CEEEEEECCCcEEEEECCC-------CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC---cEEEEECC
Confidence 3456677788888887543 56788899999999999997 669999999999999999876 56678889
Q ss_pred CCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEE
Q 009569 316 HRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELES 395 (532)
Q Consensus 316 h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 395 (532)
|...|.++.|+ ++.+++|+.||.|++||+.+++.+..+..|...+.++.| +++.+++|+.||.|++||+++.....
T Consensus 198 h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~ 273 (445)
T 2ovr_B 198 HTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLH 273 (445)
T ss_dssp CSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEE
T ss_pred CCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeE
Confidence 99999999995 568999999999999999999999999999999999998 78899999999999999998877766
Q ss_pred eecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 396 WKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 396 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
....+...|.+++| ++.++++++.|+.|++||++++. ..+..|...+.++.++ ++++++++.||.|++||++++
T Consensus 274 ~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 274 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp EECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTC
T ss_pred EecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCC
Confidence 66666668999999 78899999999999999999887 5566788888888775 679999999999999999988
Q ss_pred CcceeEEec---cccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCcee
Q 009569 474 PKLVSRYKG---HKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 474 ~~~~~~~~~---~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~~ 523 (532)
+.+..+.+ |...+.. +.| ++.+|++|+.||.|++||+.+++...
T Consensus 350 -~~~~~~~~~~~~~~~v~~--~~~---~~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 350 -QCLQTLQGPNKHQSAVTC--LQF---NKNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp -CEEEEECSTTSCSSCEEE--EEE---CSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred -cEEEEEccCCCCCCCEEE--EEE---CCCEEEEEeCCCeEEEEECCCCceee
Confidence 78888886 5555433 444 46899999999999999999986543
No 88
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=1e-30 Score=267.75 Aligned_cols=275 Identities=12% Similarity=0.230 Sum_probs=209.2
Q ss_pred cccccCCCCCceeeccCCccC----CCCCcceeEEccccc------------ccEEEEEEccCC--CEEEEEeCCCeEEE
Q 009569 237 CLFHNTSDSDFSLYSDHQCGR----NRIPSQTLQILEAHS------------DEVWFLQFSHDG--KYLASSSKDQSAII 298 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~h~------------~~V~~v~~s~~g--~~las~s~dg~i~i 298 (532)
.++.++.++.+.+|+...... .....++...+.+|. +.|++++|+|++ .+|++++.|++|++
T Consensus 42 ~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~i 121 (447)
T 3dw8_B 42 LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKL 121 (447)
T ss_dssp EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEE
T ss_pred EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEE
Confidence 445666778888887654321 112234677889998 889999999998 89999999999999
Q ss_pred EEeecCCee------------------------------------EEEEE-eecCCCCeEEEEeCCCCCEEEEeeCCCcE
Q 009569 299 WEVKEDGQV------------------------------------SLKHR-LSGHRKPVFTVSWSPNDHQLLTCGQEEAI 341 (532)
Q Consensus 299 wd~~~~~~~------------------------------------~~~~~-~~~h~~~v~~l~~s~~~~~l~s~~~dg~i 341 (532)
|++.++... ..... ..+|...|.+++|+|++++|++| .|+.|
T Consensus 122 w~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i 200 (447)
T 3dw8_B 122 WKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRI 200 (447)
T ss_dssp EEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEE
T ss_pred EecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeE
Confidence 999753210 01112 36899999999999999999998 79999
Q ss_pred EEEECCC-CcEEE-------EeeccCCceEEEEEeeCC-CeEEEEeCCCcEEEEECCCCeE-----EEeecCcc------
Q 009569 342 RRWDVNS-GECLH-------VYEKTGVGLISCGWFLDG-GGIFAGMTDKSICLWDLDGREL-----ESWKGQKT------ 401 (532)
Q Consensus 342 ~iwd~~~-~~~~~-------~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~------ 401 (532)
++||+++ ++.+. .+..|...|.+++|+|++ ++|++|+.||.|++||+++... ..+..+..
T Consensus 201 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (447)
T 3dw8_B 201 NLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSF 280 (447)
T ss_dssp EEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCH
T ss_pred EEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCcccccc
Confidence 9999984 44444 255788999999999998 9999999999999999987653 33433322
Q ss_pred -----CceEEEEEeeCCCEEEEEECCCeEEEEECCC-Cc--eeeeecCCc---------------eeEEEEcCCCCEEEE
Q 009569 402 -----LRISDMAITDDGKRIISICREAAILLLDREA-NF--ERWIEEEEV---------------ITSFSLSKDNKYLLV 458 (532)
Q Consensus 402 -----~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~-~~--~~~~~~~~~---------------i~~~~~sp~~~~l~~ 458 (532)
..|.+++|+|++++|++++. +.|++||+++ .. ..+..|... +..++|+|++++|++
T Consensus 281 ~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s 359 (447)
T 3dw8_B 281 FSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMT 359 (447)
T ss_dssp HHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEE
T ss_pred ccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEE
Confidence 27999999999999999999 9999999987 44 444444321 334999999999999
Q ss_pred EecCCeEEEEecCCCCcceeEEecccc-------------------------------ceEEEEEccCCCCCcEEEEEeC
Q 009569 459 NLINQEIHLWSIESDPKLVSRYKGHKR-------------------------------ARFVIRSCFGGFEQAFIASGSE 507 (532)
Q Consensus 459 ~~~dg~i~iwd~~~~~~~~~~~~~~~~-------------------------------~~~~i~~~~~s~d~~~l~sgs~ 507 (532)
++.||.|++||+.++ +.+ .+.++.. ...+..++| +|++.+||+++.
T Consensus 360 ~s~dg~v~iwd~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~p~~~~la~~~~ 436 (447)
T 3dw8_B 360 GSYNNFFRMFDRNTK-RDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAW-HPKENIIAVATT 436 (447)
T ss_dssp ECSTTEEEEEETTTC-CEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEE-CSSSSEEEEECS
T ss_pred eccCCEEEEEEcCCC-cce-eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEE-CCCCCEEEEEec
Confidence 999999999999887 443 3333321 112344666 999999999987
Q ss_pred CCcEEEEeCC
Q 009569 508 DSQVNIFLSF 517 (532)
Q Consensus 508 dg~i~iw~~~ 517 (532)
++ +++|..+
T Consensus 437 ~~-~~~~~~~ 445 (447)
T 3dw8_B 437 NN-LYIFQDK 445 (447)
T ss_dssp SC-EEEEECC
T ss_pred ce-eeeeccc
Confidence 76 8888643
No 89
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.98 E-value=5.5e-31 Score=264.49 Aligned_cols=234 Identities=18% Similarity=0.284 Sum_probs=195.6
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccC-CCEEEEEeCCCeEEEEEeecCCeeEEEEEe--
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHD-GKYLASSSKDQSAIIWEVKEDGQVSLKHRL-- 313 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~-g~~las~s~dg~i~iwd~~~~~~~~~~~~~-- 313 (532)
.+++++.++.+.+|+........-.......+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.++... ..+
T Consensus 122 ~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~---~~~~~ 198 (380)
T 3iz6_a 122 SVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI---SIFGS 198 (380)
T ss_dssp EEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE---EEECC
T ss_pred EEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE---EEeec
Confidence 44566778888888755432222223455678899999999999996 467999999999999999977433 333
Q ss_pred ---ecCCCCeEEEEeCC-CCCEEEEeeCCCcEEEEECC-CCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEEC
Q 009569 314 ---SGHRKPVFTVSWSP-NDHQLLTCGQEEAIRRWDVN-SGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDL 388 (532)
Q Consensus 314 ---~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 388 (532)
.+|...|.+++|++ ++.+|++|+.|++|++||++ .+..+..+.+|...|.+++|+|++++|++|+.|++|++||+
T Consensus 199 ~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 199 EFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDM 278 (380)
T ss_dssp CSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEET
T ss_pred ccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEEC
Confidence 67999999999987 88999999999999999997 55778889999999999999999999999999999999999
Q ss_pred CCCeEEEeecCc-------cCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eee----eecCCceeEEEEcCCCCE
Q 009569 389 DGRELESWKGQK-------TLRISDMAITDDGKRIISICREAAILLLDREANF--ERW----IEEEEVITSFSLSKDNKY 455 (532)
Q Consensus 389 ~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~----~~~~~~i~~~~~sp~~~~ 455 (532)
+++........+ ...|.+++|+|+|+++++++.||.|++||..+.. ..+ ..|...|++++|+|++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 358 (380)
T 3iz6_a 279 RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSA 358 (380)
T ss_dssp TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSE
T ss_pred CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCE
Confidence 987655443322 1248999999999999999999999999998776 222 468899999999999999
Q ss_pred EEEEecCCeEEEEecCCC
Q 009569 456 LLVNLINQEIHLWSIESD 473 (532)
Q Consensus 456 l~~~~~dg~i~iwd~~~~ 473 (532)
|++|+.|+.|++|++...
T Consensus 359 l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 359 LCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EEEECTTSCEEEEECCSS
T ss_pred EEEeeCCCCEEEEecCCC
Confidence 999999999999999875
No 90
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=2e-30 Score=276.57 Aligned_cols=268 Identities=16% Similarity=0.204 Sum_probs=227.0
Q ss_pred CCCceeeccCCccCCCCCcceeEEccccccc-EEEEEEcc--CCCEEEEEeCCCeEEEEEeecCC-----eeEEEEEeec
Q 009569 244 DSDFSLYSDHQCGRNRIPSQTLQILEAHSDE-VWFLQFSH--DGKYLASSSKDQSAIIWEVKEDG-----QVSLKHRLSG 315 (532)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~-V~~v~~s~--~g~~las~s~dg~i~iwd~~~~~-----~~~~~~~~~~ 315 (532)
++.+.+|+..+. ..+.+....+.+|.+. |++++|+| ++++||+|+.||.|++||+.++. .......+..
T Consensus 38 ~~~v~v~~~~~~---~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~ 114 (615)
T 1pgu_A 38 GKSAFVRCLDDG---DSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQV 114 (615)
T ss_dssp TTEEEEEECCSS---CCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEEC
T ss_pred CCeEEEEECCCC---CCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhc
Confidence 556777764421 1112678889999999 99999999 99999999999999999997431 2356677888
Q ss_pred CCCCeEEEEeCCCCCEEEEeeCC----CcEEEEECCCCcEEEEeeccCCceEEEEEeeCCC-eEEEEeCCCcEEEEECCC
Q 009569 316 HRKPVFTVSWSPNDHQLLTCGQE----EAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGG-GIFAGMTDKSICLWDLDG 390 (532)
Q Consensus 316 h~~~v~~l~~s~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~ 390 (532)
|...|.+++|+|++++|++++.+ +.|.+|| +++.+..+..|...|.+++|+|+++ .+++++.|+.|++||+.+
T Consensus 115 ~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~ 192 (615)
T 1pgu_A 115 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP 192 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT
T ss_pred ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC
Confidence 99999999999999999999987 6788887 6778899999999999999999998 799999999999999998
Q ss_pred CeEEEeecCccC---ceEEEEEeeC-CCEEEEEECCCeEEEEECCCCc-e-ee-e---ecCCceeEEEEcCCCCEEEEEe
Q 009569 391 RELESWKGQKTL---RISDMAITDD-GKRIISICREAAILLLDREANF-E-RW-I---EEEEVITSFSLSKDNKYLLVNL 460 (532)
Q Consensus 391 ~~~~~~~~~~~~---~v~~~~~s~~-~~~l~~~~~dg~I~iwd~~~~~-~-~~-~---~~~~~i~~~~~sp~~~~l~~~~ 460 (532)
.........+.. .|.+++|+|+ ++++++++.|+.|++||+.+++ . .+ . .|...|.+++|+ ++++|++++
T Consensus 193 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~ 271 (615)
T 1pgu_A 193 FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVG 271 (615)
T ss_dssp BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEE
T ss_pred cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEc
Confidence 877777766776 8999999999 9999999999999999999887 3 33 3 788999999999 999999999
Q ss_pred cCCeEEEEecCCCCcceeEEecccc--ceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 461 INQEIHLWSIESDPKLVSRYKGHKR--ARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 461 ~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
.||.|++||+.++ +.+..+..+.. ......+.| +++.++++++.||.|++||+.++.
T Consensus 272 ~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~g~i~~~d~~~~~ 330 (615)
T 1pgu_A 272 ADATIRVWDVTTS-KCVQKWTLDKQQLGNQQVGVVA--TGNGRIISLSLDGTLNFYELGHDE 330 (615)
T ss_dssp TTSEEEEEETTTT-EEEEEEECCTTCGGGCEEEEEE--EETTEEEEEETTSCEEEEETTEEE
T ss_pred CCCcEEEEECCCC-cEEEEEcCCCCcccCceeEEEe--CCCCeEEEEECCCCEEEEECCCCc
Confidence 9999999999988 78888887621 112334444 388999999999999999998754
No 91
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.98 E-value=2e-30 Score=251.16 Aligned_cols=231 Identities=18% Similarity=0.301 Sum_probs=190.9
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEcc--CCCEEEEEeCCCeEEEEEeecCCeeEEEEEee
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSH--DGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS 314 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~--~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~ 314 (532)
.+++++.|+.+.+|+.... ..+++..+.+|.++|++++|+| ++++||+|+.|++|++||+.++. ......+.
T Consensus 23 ~las~s~D~~v~iw~~~~~-----~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~-~~~~~~~~ 96 (297)
T 2pm7_B 23 RMATCSSDKTIKIFEVEGE-----THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR-WSQIAVHA 96 (297)
T ss_dssp EEEEEETTSCEEEEEBCSS-----CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC-BCCCEEEC
T ss_pred EEEEEeCCCEEEEEecCCC-----CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc-eEEEEEee
Confidence 4556777888888865321 1356788999999999999986 48999999999999999998642 23445677
Q ss_pred cCCCCeEEEEeCCC--CCEEEEeeCCCcEEEEECCCCc--EEEEeeccCCceEEEEEeeC-------------CCeEEEE
Q 009569 315 GHRKPVFTVSWSPN--DHQLLTCGQEEAIRRWDVNSGE--CLHVYEKTGVGLISCGWFLD-------------GGGIFAG 377 (532)
Q Consensus 315 ~h~~~v~~l~~s~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~-------------~~~l~~~ 377 (532)
+|...|.+++|+|+ +.+|++++.|++|++||++++. ....+..|...|.+++|+|+ +++|++|
T Consensus 97 ~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sg 176 (297)
T 2pm7_B 97 VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 176 (297)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEE
T ss_pred cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEE
Confidence 89999999999997 8899999999999999998763 24567789999999999996 5789999
Q ss_pred eCCCcEEEEECCCCe----EEEeecCccCceEEEEEeeCC---CEEEEEECCCeEEEEECCCCc----e-ee--eecCCc
Q 009569 378 MTDKSICLWDLDGRE----LESWKGQKTLRISDMAITDDG---KRIISICREAAILLLDREANF----E-RW--IEEEEV 443 (532)
Q Consensus 378 ~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~I~iwd~~~~~----~-~~--~~~~~~ 443 (532)
+.|+.|++||+++.. .......|...|.+++|+|++ .+|++++.|++|++||+++.. . .+ ..+...
T Consensus 177 s~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~ 256 (297)
T 2pm7_B 177 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV 256 (297)
T ss_dssp ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSC
T ss_pred cCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCc
Confidence 999999999997543 333444566699999999985 799999999999999998743 1 12 356788
Q ss_pred eeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 444 ITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 444 i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
|.+++|+|++++|++++.||.|++|+....
T Consensus 257 v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 257 LWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 999999999999999999999999998643
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=3.9e-30 Score=260.22 Aligned_cols=244 Identities=14% Similarity=0.184 Sum_probs=200.7
Q ss_pred cccccccE--EEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEee-cCCCCeEEEEeCCCCCEEEEeeCCCcEEEE
Q 009569 268 LEAHSDEV--WFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS-GHRKPVFTVSWSPNDHQLLTCGQEEAIRRW 344 (532)
Q Consensus 268 l~~h~~~V--~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~~~dg~i~iw 344 (532)
..+|...+ .+++|++ ..+++++.|+.|++||+.++.. ...+. .|...|.+++|+|++++|++|+.||.|++|
T Consensus 87 ~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~---~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSV---SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIY 161 (401)
T ss_dssp CTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCE---EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcE---eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEE
Confidence 34676654 4455654 5688888999999999987643 23333 388999999999999999999999999999
Q ss_pred ECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECC-CCeEEEeecCccCceEEEEEeeCCCEEEEEECCC
Q 009569 345 DVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLD-GRELESWKGQKTLRISDMAITDDGKRIISICREA 423 (532)
Q Consensus 345 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 423 (532)
|+.+++.+..+..|...|.+++| +++.+++|+.||.|++||++ ..........+...|.+++|+|+++++++++.|+
T Consensus 162 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 162 DVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 99999999999999999999999 46799999999999999998 4444444445556999999999999999999999
Q ss_pred eEEEEECCCCc--eeeeecCCceeEEEEcCCCC-EEEEEe--cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCC
Q 009569 424 AILLLDREANF--ERWIEEEEVITSFSLSKDNK-YLLVNL--INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFE 498 (532)
Q Consensus 424 ~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~-~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d 498 (532)
.|++||+++.. ..+..|...|.+++|+|++. ++++++ .|+.|++||+.++ +.+..+..+ .. +..++| +|+
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~-~~~~~~~~~-~~--v~~~~~-s~~ 314 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG-ARVNTVDAG-SQ--VTSLIW-SPH 314 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC-CEEEEEECS-SC--EEEEEE-CSS
T ss_pred eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC-CEEEEEeCC-Cc--EEEEEE-CCC
Confidence 99999999877 45567899999999999774 555554 6999999999988 777777644 33 344666 999
Q ss_pred CcEEEE--EeCCCcEEEEeCCCCCcee
Q 009569 499 QAFIAS--GSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 499 ~~~l~s--gs~dg~i~iw~~~~~~~~~ 523 (532)
+.++++ |+.||.|++|++.++....
T Consensus 315 ~~~l~~~~g~~dg~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 315 SKEIMSTHGFPDNNLSIWSYSSSGLTK 341 (401)
T ss_dssp SSEEEEEECTTTCEEEEEEEETTEEEE
T ss_pred CCeEEEEeecCCCcEEEEecCCcccee
Confidence 999999 4489999999998865443
No 93
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.98 E-value=3.5e-30 Score=284.28 Aligned_cols=267 Identities=9% Similarity=0.139 Sum_probs=227.7
Q ss_pred ccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCC
Q 009569 238 LFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHR 317 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~ 317 (532)
++.+..++.+.+|+..+ .+.+..+.+|.+.|++++|+|++++|++|+.||.|++||+.++ .....+.+|.
T Consensus 28 la~~~~~g~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~---~~~~~~~~~~ 97 (814)
T 3mkq_A 28 VLTTLYSGRVEIWNYET-------QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG---EKVVDFEAHP 97 (814)
T ss_dssp EEEEETTSEEEEEETTT-------TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC---CEEEEEECCS
T ss_pred EEEEeCCCEEEEEECCC-------CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC---cEEEEEecCC
Confidence 33444566677775432 5678889999999999999999999999999999999999876 3556778999
Q ss_pred CCeEEEEeCCCCCEEEEeeCCCcEEEEECCCC-cEEEEeeccCCceEEEEEee-CCCeEEEEeCCCcEEEEECCCCe-EE
Q 009569 318 KPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSG-ECLHVYEKTGVGLISCGWFL-DGGGIFAGMTDKSICLWDLDGRE-LE 394 (532)
Q Consensus 318 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~-~~ 394 (532)
..|.+++|+|++.+|++++.||.|++||+.++ .....+..|...|.+++|+| ++..+++++.||.|++||+.+.. ..
T Consensus 98 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 98 DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE
T ss_pred CCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 99999999999999999999999999999887 67788889999999999999 88999999999999999997543 34
Q ss_pred EeecCccCceEEEEEee--CCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEec
Q 009569 395 SWKGQKTLRISDMAITD--DGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSI 470 (532)
Q Consensus 395 ~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~ 470 (532)
....++...+.+++|+| ++.++++++.||.|++||+.++. ..+..|...|++++|+|+++++++++.||.|++||+
T Consensus 178 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~ 257 (814)
T 3mkq_A 178 TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (814)
T ss_dssp EEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred EEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 44445545899999999 99999999999999999999887 555678899999999999999999999999999999
Q ss_pred CCCCcceeEEeccccceEEEEEccCCCCCc--EEEEEeCCCcEEEEeCCCC
Q 009569 471 ESDPKLVSRYKGHKRARFVIRSCFGGFEQA--FIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~--~l~sgs~dg~i~iw~~~~~ 519 (532)
.++ +.+..+..|...+.. ++| +|++. ++++ +.|+.+.+|++..+
T Consensus 258 ~~~-~~~~~~~~~~~~v~~--~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 258 STY-KVEKTLNVGLERSWC--IAT-HPTGRKNYIAS-GFDNGFTVLSLGND 303 (814)
T ss_dssp TTC-SEEEEECCSSSSEEE--EEE-CTTCGGGEEEE-EETTEEEEEECSCC
T ss_pred CCC-cEEEEeecCCCcEEE--EEE-ccCCCceEEEE-EeCCCEEEEEcCCC
Confidence 988 888899888877544 555 88876 4554 45777889988764
No 94
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.9e-30 Score=262.52 Aligned_cols=244 Identities=16% Similarity=0.276 Sum_probs=201.5
Q ss_pred cEEEEEEccCCCEE-EEEeCCCeEEEEEeecCCee-EEEEEeecCCCCeEEEEeCC-CCCEEEEeeCCCcEEEEECCCC-
Q 009569 274 EVWFLQFSHDGKYL-ASSSKDQSAIIWEVKEDGQV-SLKHRLSGHRKPVFTVSWSP-NDHQLLTCGQEEAIRRWDVNSG- 349 (532)
Q Consensus 274 ~V~~v~~s~~g~~l-as~s~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~- 349 (532)
....++++|+...+ ++++.||.|+||++...+.. .....+.+|...|.+++|+| ++.+|++|+.||.|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 34468888877544 45789999999999654322 22345778999999999999 9999999999999999999988
Q ss_pred ------cEEEEeeccCCceEEEEEeeCC-CeEEEEeCCCcEEEEECCCCeEEEee--cCccCceEEEEEeeCCCEEEEEE
Q 009569 350 ------ECLHVYEKTGVGLISCGWFLDG-GGIFAGMTDKSICLWDLDGRELESWK--GQKTLRISDMAITDDGKRIISIC 420 (532)
Q Consensus 350 ------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~ 420 (532)
+++..+.+|...|.+++|+|++ +++++++.|+.|++||++++...... ..+...|.+++|+|++++|++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 6678889999999999999998 69999999999999999987766555 55667999999999999999999
Q ss_pred CCCeEEEEECCCCc--eee-eecCCc-eeEEEEcCCCCEEEEE---ecCCeEEEEecCCCCcceeEEe-ccccceEEEEE
Q 009569 421 REAAILLLDREANF--ERW-IEEEEV-ITSFSLSKDNKYLLVN---LINQEIHLWSIESDPKLVSRYK-GHKRARFVIRS 492 (532)
Q Consensus 421 ~dg~I~iwd~~~~~--~~~-~~~~~~-i~~~~~sp~~~~l~~~---~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~i~~ 492 (532)
.|+.|++||++++. ..+ ..|... +.++.|+|++++|++| +.|+.|++||+++....+.... .+...+ ..+
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v--~~~ 273 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGV--LLP 273 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSC--EEE
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCce--eEE
Confidence 99999999999887 333 456554 8999999999999999 7899999999998744444443 344443 345
Q ss_pred ccCCCCCcEEE-EEeCCCcEEEEeCCCCC
Q 009569 493 CFGGFEQAFIA-SGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 493 ~~~s~d~~~l~-sgs~dg~i~iw~~~~~~ 520 (532)
+| +|++.+|+ +|+.||.|++|++.++.
T Consensus 274 ~~-s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 274 FF-DPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EE-ETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EE-cCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 66 89999986 45579999999999876
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=259.95 Aligned_cols=241 Identities=13% Similarity=0.110 Sum_probs=198.7
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEee-------------------------------------
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS------------------------------------- 314 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~------------------------------------- 314 (532)
..++.+++|+|+|++|+++ .++.|++||+.++.....+..+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578899999999977666 57899999999876332333333
Q ss_pred -----------------cCCCCeEEEEeCCCCCEE-EEeeCCCcEEEEECC--CCcEEEEee--ccCCceEEEEEeeCCC
Q 009569 315 -----------------GHRKPVFTVSWSPNDHQL-LTCGQEEAIRRWDVN--SGECLHVYE--KTGVGLISCGWFLDGG 372 (532)
Q Consensus 315 -----------------~h~~~v~~l~~s~~~~~l-~s~~~dg~i~iwd~~--~~~~~~~~~--~~~~~i~~~~~~~~~~ 372 (532)
+|.+.|.+++|+|++++| ++++.||.|++||+. +++++..+. .+...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 344479999999999996 889999999999999 888888876 5578899999999999
Q ss_pred eEEEEeCCCcEEEEECCCCeEEE----eecCccCceEEEEEeeC---CCEEEEEECCCeEEEEECCCCc--ee-eeecCC
Q 009569 373 GIFAGMTDKSICLWDLDGRELES----WKGQKTLRISDMAITDD---GKRIISICREAAILLLDREANF--ER-WIEEEE 442 (532)
Q Consensus 373 ~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~I~iwd~~~~~--~~-~~~~~~ 442 (532)
+|++|+.+|.|++|++.+..... ....+...|.+++|+|+ +++|++++.|+.|++||+.++. .. ..+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999997654332 23344558999999999 9999999999999999998877 33 447899
Q ss_pred ceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccc-----------------------cceEEEEEccCCCCC
Q 009569 443 VITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHK-----------------------RARFVIRSCFGGFEQ 499 (532)
Q Consensus 443 ~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----------------------~~~~~i~~~~~s~d~ 499 (532)
.|.+++|+ ++++|++++.|+.|++||+.++ +.+..+..+. ....+..+.| +|++
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~-~~~~ 319 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTG-KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK-SKNL 319 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTC-CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE-CSSS
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCC-cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE-eCCC
Confidence 99999999 9999999999999999999988 7777776431 1122344556 8999
Q ss_pred cEEEEEe-CCCcEEEEeC
Q 009569 500 AFIASGS-EDSQVNIFLS 516 (532)
Q Consensus 500 ~~l~sgs-~dg~i~iw~~ 516 (532)
++|++++ .|+.|++|++
T Consensus 320 ~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SEEEEEETTCSEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEe
Confidence 9999999 8999999999
No 96
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=6e-29 Score=255.00 Aligned_cols=260 Identities=16% Similarity=0.328 Sum_probs=221.5
Q ss_pred ccccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeec
Q 009569 236 SCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSG 315 (532)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~ 315 (532)
..+++++.++.+.+|+..+ .+++..+.+|...|.+++|+ ++++++|+.||+|++||+.++ .....+.+
T Consensus 170 ~~l~s~~~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~---~~~~~~~~ 237 (445)
T 2ovr_B 170 NIIISGSTDRTLKVWNAET-------GECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG---QCLHVLMG 237 (445)
T ss_dssp TEEEEEETTSCEEEEETTT-------TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC---CEEEEEEC
T ss_pred CEEEEEeCCCeEEEEECCc-------CcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC---cEEEEEcC
Confidence 3566778888899987543 46788899999999999995 678999999999999999876 35577889
Q ss_pred CCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEE
Q 009569 316 HRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELES 395 (532)
Q Consensus 316 h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 395 (532)
|...|.+++| ++.++++++.||.|++||+++++++..+..|...|.++.| ++.++++|+.|+.|++||++++....
T Consensus 238 ~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~ 313 (445)
T 2ovr_B 238 HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIH 313 (445)
T ss_dssp CSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEE
Confidence 9999999999 7889999999999999999999999999999999999999 78999999999999999998876666
Q ss_pred eecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeee---cCCceeEEEEcCCCCEEEEEecCCeEEEEec
Q 009569 396 WKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIE---EEEVITSFSLSKDNKYLLVNLINQEIHLWSI 470 (532)
Q Consensus 396 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~---~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~ 470 (532)
....+...+.++.+ +++++++++.||.|++||++++. ..+.. |...|++++|+ +++|++++.||.|++||+
T Consensus 314 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 314 TLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp EECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred EEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 55566667887776 46799999999999999998877 33333 77889999996 689999999999999999
Q ss_pred CCCCcceeEE-----eccccceEEEEEccCCCCCcEEEEEeCCCc----EEEEeCCCC
Q 009569 471 ESDPKLVSRY-----KGHKRARFVIRSCFGGFEQAFIASGSEDSQ----VNIFLSFSP 519 (532)
Q Consensus 471 ~~~~~~~~~~-----~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~----i~iw~~~~~ 519 (532)
.++ +.+..+ .+|... +..+.| +|++.++++|+.||. |.+||+...
T Consensus 390 ~~~-~~~~~~~~~~~~~~~~~--v~~~~~-s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 390 KTG-EFIRNLVTLESGGSGGV--VWRIRA-SNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp TTC-CEEEEEEECTTGGGTCE--EEEEEE-CSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred CCC-ceeeeeeccccCCCCce--EEEEEe-cCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 998 777777 244444 444666 999999999999998 999999864
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.5e-29 Score=269.78 Aligned_cols=244 Identities=12% Similarity=0.209 Sum_probs=211.1
Q ss_pred cccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCe-eEEEEEeecCCCC-eEEEEeCC--CCCEEEEeeCCCcEEEEE
Q 009569 270 AHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQ-VSLKHRLSGHRKP-VFTVSWSP--NDHQLLTCGQEEAIRRWD 345 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~-~~~~~~~~~h~~~-v~~l~~s~--~~~~l~s~~~dg~i~iwd 345 (532)
.|.+.|++++|+|+|++||+++ ++.|++|++.++.. ......+.+|... |.+++|+| ++++|++++.||.|++||
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 5889999999999999999998 88999999986511 1245678899999 99999999 999999999999999999
Q ss_pred CCCC--------cEEEEeeccCCceEEEEEeeCCCeEEEEeCC----CcEEEEECCCCeEEEeecCccCceEEEEEeeCC
Q 009569 346 VNSG--------ECLHVYEKTGVGLISCGWFLDGGGIFAGMTD----KSICLWDLDGRELESWKGQKTLRISDMAITDDG 413 (532)
Q Consensus 346 ~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~ 413 (532)
+.++ +....+..|...|.+++|+|+++++++++.+ +.|++|| .+..+..+ ..+...|.+++|+|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~-~~~~~~v~~~~~~~~~ 172 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEV-SGHSQRINACHLKQSR 172 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEEEC-CSCSSCEEEEEECSSS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcceee-ecCCccEEEEEECCCC
Confidence 9755 6777888899999999999999999999987 6899998 33344444 4555699999999999
Q ss_pred C-EEEEEECCCeEEEEECCCCc--eeeeecCC---ceeEEEEcCC-CCEEEEEecCCeEEEEecCCCCcceeEE-e---c
Q 009569 414 K-RIISICREAAILLLDREANF--ERWIEEEE---VITSFSLSKD-NKYLLVNLINQEIHLWSIESDPKLVSRY-K---G 482 (532)
Q Consensus 414 ~-~l~~~~~dg~I~iwd~~~~~--~~~~~~~~---~i~~~~~sp~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~---~ 482 (532)
+ .+++++.|+.|++||..+.. ..+..|.. .|++++|+|+ +++|++++.||.|++||+.++ +.+..+ . +
T Consensus 173 ~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~ 251 (615)
T 1pgu_A 173 PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG-EFLKYIEDDQEP 251 (615)
T ss_dssp SCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC-CEEEECCBTTBC
T ss_pred CcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC-CEeEEecccccc
Confidence 8 89999999999999998877 55556777 8999999999 999999999999999999988 788888 5 7
Q ss_pred cccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 483 HKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 483 ~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
|...+.. +.| + ++.+|++++.||.|++||+.++..
T Consensus 252 ~~~~v~~--~~~-~-~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 252 VQGGIFA--LSW-L-DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp CCSCEEE--EEE-S-SSSEEEEEETTSEEEEEETTTTEE
T ss_pred cCCceEE--EEE-c-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 8777544 556 6 999999999999999999998754
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=2e-30 Score=253.54 Aligned_cols=230 Identities=20% Similarity=0.278 Sum_probs=188.9
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEcc--CCCEEEEEeCCCeEEEEEeecCCeeEEEEEee
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSH--DGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS 314 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~--~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~ 314 (532)
.+++++.|+.+.+|+.... ...++..+.+|.+.|++++|+| ++++|++|+.|++|++||+.++. ......+.
T Consensus 27 ~lasgs~D~~v~lwd~~~~-----~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~-~~~~~~~~ 100 (316)
T 3bg1_A 27 RLATCSSDRSVKIFDVRNG-----GQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT-WEKSHEHA 100 (316)
T ss_dssp EEEEEETTTEEEEEEEETT-----EEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC-CCEEEEEC
T ss_pred EEEEEeCCCeEEEEEecCC-----CcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc-ceEEEEcc
Confidence 4456667777888864321 1135678899999999999986 48999999999999999998642 33556788
Q ss_pred cCCCCeEEEEeCCC--CCEEEEeeCCCcEEEEECCCCcE---EEEeeccCCceEEEEEeeC-----------------CC
Q 009569 315 GHRKPVFTVSWSPN--DHQLLTCGQEEAIRRWDVNSGEC---LHVYEKTGVGLISCGWFLD-----------------GG 372 (532)
Q Consensus 315 ~h~~~v~~l~~s~~--~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~i~~~~~~~~-----------------~~ 372 (532)
+|...|.+++|+|+ +.+|++|+.|++|++||++++.. ...+..|...+.+++|+|+ ++
T Consensus 101 ~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (316)
T 3bg1_A 101 GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIK 180 (316)
T ss_dssp CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCC
T ss_pred CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccc
Confidence 99999999999998 78999999999999999987632 3455678888999999997 47
Q ss_pred eEEEEeCCCcEEEEECCCC---eEEEeecCccCceEEEEEeeCC----CEEEEEECCCeEEEEECCCCc------eeeee
Q 009569 373 GIFAGMTDKSICLWDLDGR---ELESWKGQKTLRISDMAITDDG----KRIISICREAAILLLDREANF------ERWIE 439 (532)
Q Consensus 373 ~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~I~iwd~~~~~------~~~~~ 439 (532)
+|++|+.|+.|++||+++. ........|...|.+++|+|++ .+|++++.|++|++||+.+.. ..+..
T Consensus 181 ~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~ 260 (316)
T 3bg1_A 181 RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHK 260 (316)
T ss_dssp BEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEE
T ss_pred eEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhc
Confidence 8999999999999999753 2333444566689999999986 899999999999999997621 33456
Q ss_pred cCCceeEEEEcCCCCEEEEEecCCeEEEEecCC
Q 009569 440 EEEVITSFSLSKDNKYLLVNLINQEIHLWSIES 472 (532)
Q Consensus 440 ~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~ 472 (532)
|...|.+++|+|++++|++++.|+.|++|+...
T Consensus 261 ~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 261 FNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 788999999999999999999999999999764
No 99
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=5.8e-29 Score=254.38 Aligned_cols=236 Identities=20% Similarity=0.363 Sum_probs=205.3
Q ss_pred EEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEE
Q 009569 266 QILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWD 345 (532)
Q Consensus 266 ~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 345 (532)
....+|...|++++| ++++|++|+.||.|++||+.++ +....+.+|...|.+++| ++++|++|+.||.|++||
T Consensus 127 ~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd 199 (435)
T 1p22_A 127 HCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL---ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD 199 (435)
T ss_dssp ECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC---CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred ecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC---eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEE
Confidence 334567888999887 8999999999999999999876 456778899999999999 788999999999999999
Q ss_pred CCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeE---EEeecCccCceEEEEEeeCCCEEEEEECC
Q 009569 346 VNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGREL---ESWKGQKTLRISDMAITDDGKRIISICRE 422 (532)
Q Consensus 346 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 422 (532)
+.+++.+..+..|...|.+++|+ +..+++|+.||.|++||+++... ......+...|.+++| +++++++++.|
T Consensus 200 ~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d 275 (435)
T 1p22_A 200 VNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD 275 (435)
T ss_dssp SSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred CCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC
Confidence 99999999999999999999996 46999999999999999986432 2445556668999998 68899999999
Q ss_pred CeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCc
Q 009569 423 AAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQA 500 (532)
Q Consensus 423 g~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~ 500 (532)
|.|++||++++. ..+..|...|.+++++ ++++++|+.||.|++||++++ +.+..+.+|...+.. +.| ++.
T Consensus 276 g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~--~~~---~~~ 347 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRC--IRF---DNK 347 (435)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEE--EEC---CSS
T ss_pred CeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC-CEEEEEeCCcCcEEE--EEe---cCC
Confidence 999999999887 5666788999999994 789999999999999999998 889999999888554 333 788
Q ss_pred EEEEEeCCCcEEEEeCCCCC
Q 009569 501 FIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 501 ~l~sgs~dg~i~iw~~~~~~ 520 (532)
+|++|+.||.|++||+.++.
T Consensus 348 ~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 348 RIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EEEEEETTSCEEEEEHHHHT
T ss_pred EEEEEeCCCcEEEEECCCCC
Confidence 99999999999999986643
No 100
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=5.1e-28 Score=243.37 Aligned_cols=266 Identities=11% Similarity=0.119 Sum_probs=216.1
Q ss_pred ccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEE-EEEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 238 LFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYL-ASSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~l-as~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
++.+..++.+.+|+..+ .+.+..+..|. .+.+++|+|+|+++ ++++.|+.|++||..++ +....+..+
T Consensus 5 ~vs~~~d~~v~v~d~~~-------~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~---~~~~~~~~~ 73 (391)
T 1l0q_A 5 YIANSESDNISVIDVTS-------NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN---NVIATVPAG 73 (391)
T ss_dssp EEEETTTTEEEEEETTT-------TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT---EEEEEEECS
T ss_pred EEEcCCCCEEEEEECCC-------CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCC---eEEEEEECC
Confidence 44566778899997543 45666777665 48999999999977 67779999999999866 344555555
Q ss_pred CCCeEEEEeCCCCCEEEEee-CCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeE-EEEeCCCcEEEEECCCCeEE
Q 009569 317 RKPVFTVSWSPNDHQLLTCG-QEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGI-FAGMTDKSICLWDLDGRELE 394 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~ 394 (532)
. .+.+++|+|++++|++++ .++.|++||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||+.++...
T Consensus 74 ~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 74 S-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred C-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 4 899999999999886554 6799999999999988887754 468999999999987 67788999999999887766
Q ss_pred EeecCccCceEEEEEeeCCCEE-EEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEe---cCCeEEEEe
Q 009569 395 SWKGQKTLRISDMAITDDGKRI-ISICREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNL---INQEIHLWS 469 (532)
Q Consensus 395 ~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~---~dg~i~iwd 469 (532)
.....+. .+.+++|+|+++.+ ++++.++.|++||++++. .....+...+.+++|+|+++++++++ .++.|++||
T Consensus 152 ~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 152 NTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp EEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred EEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEE
Confidence 5555443 68999999999987 566788999999999887 55566777899999999999999988 689999999
Q ss_pred cCCCCcceeEEeccccceEEEEEccCCCCCcEE-EEEeCCCcEEEEeCCCCCce
Q 009569 470 IESDPKLVSRYKGHKRARFVIRSCFGGFEQAFI-ASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l-~sgs~dg~i~iw~~~~~~~~ 522 (532)
+.++ +.+..+..+... ..+.| +|++++| ++++.|+.|++||+.++...
T Consensus 231 ~~~~-~~~~~~~~~~~~---~~~~~-s~dg~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 231 TGTN-KITARIPVGPDP---AGIAV-TPDGKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp TTTT-EEEEEEECCSSE---EEEEE-CTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCC-eEEEEEecCCCc---cEEEE-ccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence 9988 788888876652 44566 8999877 67788999999999987644
No 101
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.1e-30 Score=251.84 Aligned_cols=230 Identities=10% Similarity=0.040 Sum_probs=184.3
Q ss_pred EEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECC---------CC
Q 009569 279 QFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVN---------SG 349 (532)
Q Consensus 279 ~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~---------~~ 349 (532)
.+.+++.+|++|+.||+|++||+.++....... ...|.++.|+|+ +++++.|++|++|+.. ++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-----TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-----EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-----cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc
Confidence 455688899999999999999999775443322 356778889988 9999999999999665 55
Q ss_pred cEEEEee-ccCCceEEEEEee--CCCeEEEEeCCCcEEEEECCCCeEEEee-cCccCceEEEEEeeCCCEEEEEECCCeE
Q 009569 350 ECLHVYE-KTGVGLISCGWFL--DGGGIFAGMTDKSICLWDLDGRELESWK-GQKTLRISDMAITDDGKRIISICREAAI 425 (532)
Q Consensus 350 ~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~I 425 (532)
+.+..+. .|...|.+++|+| +++++++|+.||.|++||++++...... ..+...|.+++|+|++.++++|+.||.|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i 194 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL 194 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 5455554 5667899999999 9999999999999999999877665444 4444479999999999999999999999
Q ss_pred EEEECCCCc-e--eeee-cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEec---cccceEEEEEccCCCC
Q 009569 426 LLLDREANF-E--RWIE-EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKG---HKRARFVIRSCFGGFE 498 (532)
Q Consensus 426 ~iwd~~~~~-~--~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~i~~~~~s~d 498 (532)
++||++++. . .+.. |..+|++++|+|++.+|++++ ++.|++||+++. +.+..+.. |...+....++| +|+
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~ 271 (343)
T 3lrv_A 195 DVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKD-VGTLAYPTYTIPEFKTGTVTYDI-DDS 271 (343)
T ss_dssp EEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSS-TTCBSSCCCBC-----CCEEEEE-CTT
T ss_pred EEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCC-CcceeecccccccccccceEEEE-CCC
Confidence 999999887 2 4555 899999999999999999999 559999999987 55555443 322211123666 999
Q ss_pred CcEEEEEeC-CCcEEEEeCCCC
Q 009569 499 QAFIASGSE-DSQVNIFLSFSP 519 (532)
Q Consensus 499 ~~~l~sgs~-dg~i~iw~~~~~ 519 (532)
+++|++++. |+.|++|++...
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTT
T ss_pred CCEEEEecCCCCcEEEEEEccc
Confidence 999999998 999999998654
No 102
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=3.9e-29 Score=249.45 Aligned_cols=199 Identities=14% Similarity=0.141 Sum_probs=164.2
Q ss_pred cccccEEEEEEccCCCEEEEE--eCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECC
Q 009569 270 AHSDEVWFLQFSHDGKYLASS--SKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVN 347 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~--s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 347 (532)
.+...+.+++|||||+++|++ +.|++|+|||+.++ .....+. |...|.+++|+|||+++++++.+ .+.+|+..
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~---~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~ 205 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL---TEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTV 205 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT---EEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETT
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC---cEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEec
Confidence 455679999999999998754 47899999999876 3444443 77889999999999999998854 56777777
Q ss_pred CCcEEEE--eeccCCceEEEEEeeCCCeEEEEeCCC----cEEEEECCCCeEE----EeecCccCceEEEEEeeCCCEEE
Q 009569 348 SGECLHV--YEKTGVGLISCGWFLDGGGIFAGMTDK----SICLWDLDGRELE----SWKGQKTLRISDMAITDDGKRII 417 (532)
Q Consensus 348 ~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~ 417 (532)
++..+.. ...|...|.+++|+|+++.+++++.|+ .+++||+...... .....+...|++++|+|||++|+
T Consensus 206 ~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~la 285 (365)
T 4h5i_A 206 TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAV 285 (365)
T ss_dssp TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEE
T ss_pred cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceE
Confidence 7776543 446788899999999999999999887 6888998654332 22334455899999999999999
Q ss_pred EEECCCeEEEEECCCCc--ee-eeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 418 SICREAAILLLDREANF--ER-WIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 418 ~~~~dg~I~iwd~~~~~--~~-~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
+|+.|+.|+|||+++++ .. ..+|...|++++|+|||++|++|+.|++|+|||+...
T Consensus 286 sgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 286 LASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999987 33 3479999999999999999999999999999999754
No 103
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=3.4e-29 Score=252.56 Aligned_cols=241 Identities=13% Similarity=0.114 Sum_probs=175.3
Q ss_pred ccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCee--EEEEEeecCCCCeEEEEeCC--------CCCEEEEeeCCCc
Q 009569 271 HSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQV--SLKHRLSGHRKPVFTVSWSP--------NDHQLLTCGQEEA 340 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~--~~~~~~~~h~~~v~~l~~s~--------~~~~l~s~~~dg~ 340 (532)
|...+....+++++.+||+|+.|++|+|||..++... .....+.+|.+.|.+++|+| |+++|++|+.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 4444445555567789999999999999999876432 22344679999999999998 7899999999999
Q ss_pred EEEEECCCCcEEEEeeccCCceEEEEEeeCC-CeEEEEeCCCcEEEEECCCCeEEEe-----------------------
Q 009569 341 IRRWDVNSGECLHVYEKTGVGLISCGWFLDG-GGIFAGMTDKSICLWDLDGRELESW----------------------- 396 (532)
Q Consensus 341 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~----------------------- 396 (532)
|+|||+.++.++..+..|...+.+++|+|++ .+|++|+.|++|++||++++.....
T Consensus 168 v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 168 LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 9999999998888888899999999999987 4799999999999999976432111
Q ss_pred --ecCccCceEEEEEe-eCCCEEEEEECCCeEEEEECCCCc--eeeeecCCcee------------------EEEEcC--
Q 009569 397 --KGQKTLRISDMAIT-DDGKRIISICREAAILLLDREANF--ERWIEEEEVIT------------------SFSLSK-- 451 (532)
Q Consensus 397 --~~~~~~~v~~~~~s-~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~------------------~~~~sp-- 451 (532)
...+...+.++.|+ |+++.+++++.|+.+++||+.... ..+..+...+. ...++|
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRY 327 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSC
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCC
Confidence 11334478889987 799999999999999999998765 22222222222 233333
Q ss_pred CCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeC
Q 009569 452 DNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLS 516 (532)
Q Consensus 452 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~ 516 (532)
++.++++|+.||.|++||+.++ +.+..+.+|...+ ..++| +|||++||++++|| +.+|.+
T Consensus 328 ~~~~~~sgs~Dg~V~lwd~~~~-~~~~~~~~~~~~V--~svaf-spdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 328 MDYFATAHSQHGLIQLINTYEK-DSNSIPIQLGMPI--VDFCW-HQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TTEEEEEETTTTEEEEEETTCT-TCCEEEEECSSCE--EEEEE-CTTSSEEEEEESSE-EEEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCC-cEEEEecCCCCcE--EEEEE-cCCCCEEEEEeCCC-eEEEEE
Confidence 3456778888999999999988 7777777787774 44777 99999999998776 555554
No 104
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=6e-28 Score=237.57 Aligned_cols=233 Identities=18% Similarity=0.239 Sum_probs=191.9
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCe----------
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQ---------- 306 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~---------- 306 (532)
.+++++.|+.+.+|+-.... .....+...+.+|...|++++|+|+|++|++|+.|+.|++|+......
T Consensus 53 ~l~S~s~D~~i~vWd~~~~~--~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~ 130 (340)
T 4aow_A 53 MILSASRDKTIIMWKLTRDE--TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 130 (340)
T ss_dssp EEEEEETTSCEEEEEECCSS--SCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred EEEEEcCCCeEEEEECCCCC--cccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCc
Confidence 46678888899999754321 122456778999999999999999999999999999999998753210
Q ss_pred ------------------------------eEEEEEeecCCCCeEEEEeCCCC--CEEEEeeCCCcEEEEECCCCcEEEE
Q 009569 307 ------------------------------VSLKHRLSGHRKPVFTVSWSPND--HQLLTCGQEEAIRRWDVNSGECLHV 354 (532)
Q Consensus 307 ------------------------------~~~~~~~~~h~~~v~~l~~s~~~--~~l~s~~~dg~i~iwd~~~~~~~~~ 354 (532)
........+|...+..++|++++ .++++++.|+.|++||+.+++.+..
T Consensus 131 ~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~ 210 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 210 (340)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred eeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeE
Confidence 11223345688889999998865 5788999999999999999999999
Q ss_pred eeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc
Q 009569 355 YEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF 434 (532)
Q Consensus 355 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~ 434 (532)
+..|...|.+++|+|++++|++|+.|+.|++||+++.........+. .|.+++|+|++.+ ++++.|+.|++||+++..
T Consensus 211 ~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~v~~~~~~~~~~~-~~~~~d~~i~iwd~~~~~ 288 (340)
T 4aow_A 211 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYW-LCAATGPSIKIWDLEGKI 288 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-CEEEEEECSSSSE-EEEEETTEEEEEETTTTE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-eEEeeecCCCCce-eeccCCCEEEEEECCCCe
Confidence 99999999999999999999999999999999999877665555554 8999999998764 556679999999998765
Q ss_pred --e---------eeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 435 --E---------RWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 435 --~---------~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
. ....|...|++++|+|++++|++|+.||.|+|||+.++
T Consensus 289 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 289 IVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp EEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred EEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 1 12357788999999999999999999999999999887
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.7e-28 Score=248.78 Aligned_cols=244 Identities=13% Similarity=0.069 Sum_probs=194.9
Q ss_pred ccccccEEEEEEccCCCEE-EEEeCCCeEEEEEee--cCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEE
Q 009569 269 EAHSDEVWFLQFSHDGKYL-ASSSKDQSAIIWEVK--EDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWD 345 (532)
Q Consensus 269 ~~h~~~V~~v~~s~~g~~l-as~s~dg~i~iwd~~--~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 345 (532)
.+|.+.|++++|+|++++| ++|+.||.|++||+. ++.....+. ...|...|.+++|+|++++|++++.+|.|++|+
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK-RFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE-EEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee-cccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 3577789999999999996 899999999999998 654432222 236788999999999999999999999999999
Q ss_pred CCCCcEEE----EeeccCCceEEEEEeeC---CCeEEEEeCCCcEEEEECCCCe-EEEeecCccCceEEEEEeeCCCEEE
Q 009569 346 VNSGECLH----VYEKTGVGLISCGWFLD---GGGIFAGMTDKSICLWDLDGRE-LESWKGQKTLRISDMAITDDGKRII 417 (532)
Q Consensus 346 ~~~~~~~~----~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~ 417 (532)
+.+++... .+.+|...|.+++|+|+ +++|++|+.|+.|++||++++. +..+...+...|.+++|+ ++++|+
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE
Confidence 98877544 77889999999999999 9999999999999999998654 444455666799999999 999999
Q ss_pred EEECCCeEEEEECCCCc--eeee-------------------------ecCCceeEEEEcCCCCEEEEEe-cCCeEEEEe
Q 009569 418 SICREAAILLLDREANF--ERWI-------------------------EEEEVITSFSLSKDNKYLLVNL-INQEIHLWS 469 (532)
Q Consensus 418 ~~~~dg~I~iwd~~~~~--~~~~-------------------------~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd 469 (532)
+++.|+.|++||+.+++ ..+. .....|.+++|+|++++|++++ .++.|++|+
T Consensus 257 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 99999999999999877 2222 1235689999999999999998 899999999
Q ss_pred c--CCCC--cceeEEeccccceEEEEEccCCCCCcEEEEEeC------CCcEEEEeCCC
Q 009569 470 I--ESDP--KLVSRYKGHKRARFVIRSCFGGFEQAFIASGSE------DSQVNIFLSFS 518 (532)
Q Consensus 470 ~--~~~~--~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~------dg~i~iw~~~~ 518 (532)
+ .... ..+..+.++ .. +..++| +|++.++++++. +..|.+|.+..
T Consensus 337 ~~~~~~~~l~~~~~~~~~-~~--v~~~~~-~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 337 MSEKQKGDLALKQIITFP-YN--VISLSA-HNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp ECSSSTTCEEEEEEEECS-SC--EEEEEE-ETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred eccCCCCceeeccEeccC-Cc--eEEEEe-cCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 9 3321 456667777 44 355666 776544444443 45578887654
No 106
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.5e-28 Score=270.76 Aligned_cols=239 Identities=10% Similarity=0.088 Sum_probs=193.9
Q ss_pred cccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECC
Q 009569 268 LEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVN 347 (532)
Q Consensus 268 l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 347 (532)
..+|.+.|++++|+|++++||+|+.||+|+||+.... ..... ..|..+|.+++|+| +++|++++.|++|++||+.
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~---~~~~~-~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV---EVVIK-LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC---EEEEE-CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc---EEEEE-cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 4589999999999999999999999999999998743 23333 35788999999999 8899999999999999999
Q ss_pred CCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEe-----------ecCccCceEEEEEeeC-CCE
Q 009569 348 SGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESW-----------KGQKTLRISDMAITDD-GKR 415 (532)
Q Consensus 348 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-----------~~~~~~~v~~~~~s~~-~~~ 415 (532)
+++++..+. +...|++++|+|+++++++|+.||.|++||+++..+..+ ...|...|.+++|+|+ +..
T Consensus 88 ~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 88 SQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp TCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred CCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 999998886 667899999999999999999999999999998775422 2345568999999996 578
Q ss_pred EEEEECCCeEEEEECCCCc--eeeeec------------------CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCc
Q 009569 416 IISICREAAILLLDREANF--ERWIEE------------------EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPK 475 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~~~--~~~~~~------------------~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~ 475 (532)
+++++.|+.| +||+++.. ..+..+ ...|++++|+|+|++|++++.||.|++||++++ +
T Consensus 167 l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g-~ 244 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG-H 244 (902)
T ss_dssp EEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC-C
T ss_pred EEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC-c
Confidence 9999999999 99999877 233322 467999999999999999999999999999887 5
Q ss_pred ceeE--E---ecc-------------ccceEEEEEccC---CCCC-cEEEEEeCC-----CcEEEEeC
Q 009569 476 LVSR--Y---KGH-------------KRARFVIRSCFG---GFEQ-AFIASGSED-----SQVNIFLS 516 (532)
Q Consensus 476 ~~~~--~---~~~-------------~~~~~~i~~~~~---s~d~-~~l~sgs~d-----g~i~iw~~ 516 (532)
++.. + .+| ...+. .++|. +|++ .+|++|+.| ..+.+|++
T Consensus 245 ~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~--~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 245 MIMARTVFETEINVPQPDYIRDSSTNAAKIS--KVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEEECSSCSCTTSCCTTCCCCCSSCCCEEE--EEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred EEEEEeecccccCCCCCcCCCCCccccCCee--EEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 5543 2 123 22333 34441 3553 577888776 37889984
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.5e-28 Score=240.15 Aligned_cols=239 Identities=13% Similarity=0.180 Sum_probs=196.9
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEcc--CCCEEEEEeCCCeEEEEEeecCC------eeE
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSH--DGKYLASSSKDQSAIIWEVKEDG------QVS 308 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~--~g~~las~s~dg~i~iwd~~~~~------~~~ 308 (532)
.+++++.++.+.+|+.... ....+....+.+|...|++++|+| ++++|++|+.||.|++||+.++. ...
T Consensus 25 ~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 101 (351)
T 3f3f_A 25 HVATCSSDQHIKVFKLDKD---TSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWN 101 (351)
T ss_dssp EEEEEETTSEEEEEEECSS---SCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEE
T ss_pred EEEEeeCCCeEEEEECCCC---CCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcc
Confidence 4556677778888875432 112256778889999999999999 69999999999999999998642 225
Q ss_pred EEEEeecCCCCeEEEEeCCC--CCEEEEeeCCCcEEEEECCCCcEEEEee-------------ccCCceEEEEEeeC---
Q 009569 309 LKHRLSGHRKPVFTVSWSPN--DHQLLTCGQEEAIRRWDVNSGECLHVYE-------------KTGVGLISCGWFLD--- 370 (532)
Q Consensus 309 ~~~~~~~h~~~v~~l~~s~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------~~~~~i~~~~~~~~--- 370 (532)
....+..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+. .+...+.+++|+|+
T Consensus 102 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 181 (351)
T 3f3f_A 102 KLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFS 181 (351)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSS
T ss_pred eeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCC
Confidence 67778899999999999999 9999999999999999998887544332 46778999999997
Q ss_pred CCeEEEEeCCCcEEEEECCCCeE--EEeecCccCceEEEEEeeCC----CEEEEEECCCeEEEEECCCC-----------
Q 009569 371 GGGIFAGMTDKSICLWDLDGREL--ESWKGQKTLRISDMAITDDG----KRIISICREAAILLLDREAN----------- 433 (532)
Q Consensus 371 ~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~I~iwd~~~~----------- 433 (532)
+..+++++.++.+.+|+...... ......+...|.+++|+|++ ++|++++.||.|++||++..
T Consensus 182 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 261 (351)
T 3f3f_A 182 PEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLT 261 (351)
T ss_dssp CCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----------
T ss_pred CcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCccc
Confidence 99999999999998888876554 33344556699999999998 89999999999999999874
Q ss_pred -----------------------------------c--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcc
Q 009569 434 -----------------------------------F--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKL 476 (532)
Q Consensus 434 -----------------------------------~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~ 476 (532)
. ..+..|...|++++|+|++++|++++.||.|++||+.++ +.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~-~~ 340 (351)
T 3f3f_A 262 NSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS-NE 340 (351)
T ss_dssp -----------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT-SC
T ss_pred ceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC-cc
Confidence 1 334457889999999999999999999999999999876 44
Q ss_pred eeE
Q 009569 477 VSR 479 (532)
Q Consensus 477 ~~~ 479 (532)
+..
T Consensus 341 ~~~ 343 (351)
T 3f3f_A 341 FKC 343 (351)
T ss_dssp EEE
T ss_pred hhh
Confidence 443
No 108
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1.6e-27 Score=242.60 Aligned_cols=238 Identities=13% Similarity=0.197 Sum_probs=197.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEE
Q 009569 274 EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLH 353 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 353 (532)
.++.++||++ ++||+|. |++|+|||..++.. .....+.+|...|++++|+|+|++|++|+.||.|++||+.+++++.
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~-~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDI-LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCE-EEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCE-EEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 5778999976 4777775 99999999997643 3344566788899999999999999999999999999999999999
Q ss_pred EeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC-CeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCC
Q 009569 354 VYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG-RELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREA 432 (532)
Q Consensus 354 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~ 432 (532)
.+.+|...+.++.| ++..+++|+.|+.+++||... .........+...+..+.++|++.++++++.|+.|++||..+
T Consensus 184 ~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 184 NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 99999999988777 577999999999999999875 333333344555899999999999999999999999999987
Q ss_pred Cc------eeeeecCCceeEEEEcCCCC-EEEEE--ecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEE
Q 009569 433 NF------ERWIEEEEVITSFSLSKDNK-YLLVN--LINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIA 503 (532)
Q Consensus 433 ~~------~~~~~~~~~i~~~~~sp~~~-~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~ 503 (532)
+. .....|...|.+++|+|++. +++++ +.|+.|++||+.++ ..+..+..+.. +..+.| ++++..++
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~-~~~~~~~~~~~---v~~~~~-~~~~~~lv 336 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-ACLSAVDAHSQ---VCSILW-SPHYKELI 336 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT-EEEEEEECSSC---EEEEEE-ETTTTEEE
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc-ccceeeccccc---eeeeee-cCCCCeEE
Confidence 65 34557888999999999764 55543 57999999999998 78888877665 345566 78888887
Q ss_pred EEe--CCCcEEEEeCCCCCc
Q 009569 504 SGS--EDSQVNIFLSFSPFA 521 (532)
Q Consensus 504 sgs--~dg~i~iw~~~~~~~ 521 (532)
+++ .||.|+|||+.++..
T Consensus 337 ~~sg~~d~~I~iwd~~~~~~ 356 (420)
T 4gga_A 337 SGHGFAQNQLVIWKYPTMAK 356 (420)
T ss_dssp EEECTTTCCEEEEETTTCCE
T ss_pred EEEecCCCEEEEEECCCCcE
Confidence 765 799999999998754
No 109
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.8e-28 Score=242.48 Aligned_cols=231 Identities=18% Similarity=0.313 Sum_probs=194.6
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccC--CCEEEEEeCCCeEEEEEeecCCeeEEEEEee
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHD--GKYLASSSKDQSAIIWEVKEDGQVSLKHRLS 314 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~--g~~las~s~dg~i~iwd~~~~~~~~~~~~~~ 314 (532)
.++.++.++.+.+|+... ...+.+..+.+|.+.|++++|+|+ +++|++|+.||.|++||+.++ .......+.
T Consensus 25 ~l~~~~~dg~i~iw~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~ 98 (379)
T 3jrp_A 25 RLATCSSDKTIKIFEVEG-----ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG-RWSQIAVHA 98 (379)
T ss_dssp EEEEEETTSCEEEEEEET-----TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT-EEEEEEEEC
T ss_pred EEEEEECCCcEEEEecCC-----CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC-ceeEeeeec
Confidence 445556677788886431 124667788999999999999987 999999999999999999965 334667788
Q ss_pred cCCCCeEEEEeCCC--CCEEEEeeCCCcEEEEECCCCc--EEEEeeccCCceEEEEEee-------------CCCeEEEE
Q 009569 315 GHRKPVFTVSWSPN--DHQLLTCGQEEAIRRWDVNSGE--CLHVYEKTGVGLISCGWFL-------------DGGGIFAG 377 (532)
Q Consensus 315 ~h~~~v~~l~~s~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~ 377 (532)
.|...|.+++|+|+ +.+|++++.|+.|++||+.++. ....+..|...|.+++|+| ++.++++|
T Consensus 99 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (379)
T 3jrp_A 99 VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 178 (379)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEE
T ss_pred CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEE
Confidence 89999999999999 9999999999999999998873 4456678899999999999 69999999
Q ss_pred eCCCcEEEEECCCC----eEEEeecCccCceEEEEEeeC---CCEEEEEECCCeEEEEECCCCc-------eeeeecCCc
Q 009569 378 MTDKSICLWDLDGR----ELESWKGQKTLRISDMAITDD---GKRIISICREAAILLLDREANF-------ERWIEEEEV 443 (532)
Q Consensus 378 ~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~I~iwd~~~~~-------~~~~~~~~~ 443 (532)
+.|+.|++||+++. ........|...|.+++|+|+ +.++++++.||.|++||+++.. .....+...
T Consensus 179 ~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 258 (379)
T 3jrp_A 179 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV 258 (379)
T ss_dssp ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSC
T ss_pred eCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCc
Confidence 99999999999753 233344455668999999999 8999999999999999998863 122237788
Q ss_pred eeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 444 ITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 444 i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
|++++|+|++++|++++.||.|++|++...
T Consensus 259 v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 259 LWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 999999999999999999999999999754
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=3.6e-28 Score=241.57 Aligned_cols=238 Identities=11% Similarity=0.088 Sum_probs=182.0
Q ss_pred ceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEE-EEeeCCCcE
Q 009569 263 QTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQL-LTCGQEEAI 341 (532)
Q Consensus 263 ~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~~~dg~i 341 (532)
+++..+++|.+.|++++|+|||++||+|+.++ +++|++.+. ....... ...+..+++.++++.+ ++++.|++|
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v 83 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPV---AHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVV 83 (355)
T ss_dssp ---------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTE---EEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEE
T ss_pred CCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCc---ceeeeee--cCCeEEEEEcCCCCEEEEEECCccEE
Confidence 44556788999999999999999999998775 789998754 2222222 2247788898888877 567788999
Q ss_pred EEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCC-e-EEEeecCccCceEEEEEeeCCCEEEE-
Q 009569 342 RRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGR-E-LESWKGQKTLRISDMAITDDGKRIIS- 418 (532)
Q Consensus 342 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~-~~~~~~~~~~~v~~~~~s~~~~~l~~- 418 (532)
++||+.+++++..+. +...|.++.|+++. ++++ .|+.|++||+.+. . +..+.. ....+++++ .++++
T Consensus 84 ~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~la~~ 153 (355)
T 3vu4_A 84 HIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GLLVYS 153 (355)
T ss_dssp EEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TEEEEE
T ss_pred EEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEEc--cEEEEe
Confidence 999999999998887 56689999998763 4444 4789999999875 2 222222 344556666 56666
Q ss_pred -EECCCeEEEEECCCCc------------------eeeeecCCceeEEEEcCCCCEEEEEecCCe-EEEEecCCCCccee
Q 009569 419 -ICREAAILLLDREANF------------------ERWIEEEEVITSFSLSKDNKYLLVNLINQE-IHLWSIESDPKLVS 478 (532)
Q Consensus 419 -~~~dg~I~iwd~~~~~------------------~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~-i~iwd~~~~~~~~~ 478 (532)
++.+|.|++||+.+.. ..+..|...|++++|+|++++|++++.|++ |++||++++ +.+.
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~-~~~~ 232 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG-VLVR 232 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC-CEEE
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEE
Confidence 4789999999998743 456689999999999999999999999998 999999998 8888
Q ss_pred EEe-c-cccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 479 RYK-G-HKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 479 ~~~-~-~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
.+. + |...+.. ++| +|++++|++++.|+.|++||+..+.
T Consensus 233 ~~~~g~h~~~v~~--~~~-s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 233 EFRRGLDRADVVD--MKW-STDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEECTTCCSCEEE--EEE-CTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EEEcCCCCCcEEE--EEE-CCCCCEEEEEECCCEEEEEEccCCC
Confidence 888 5 7777444 566 9999999999999999999998754
No 111
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.7e-28 Score=241.32 Aligned_cols=265 Identities=9% Similarity=0.075 Sum_probs=199.6
Q ss_pred cccccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCC------eeE
Q 009569 235 DSCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDG------QVS 308 (532)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~------~~~ 308 (532)
...+++++.|+.+.+|+... .+.+..+. ...|.++.|+|+ +++++.|++|++|+..... ...
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~-------~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKD-------SKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp EEEEEEEEETTEEEEEEESS-------SSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred CCEEEEECCCCcEEEEECCC-------CcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 34566788899999997654 33444444 567888899998 9999999999999765210 111
Q ss_pred EEEEe-ecCCCCeEEEEeCC--CCCEEEEeeCCCcEEEEECCCCcEEEEeec-cCCceEEEEEeeCCCeEEEEeCCCcEE
Q 009569 309 LKHRL-SGHRKPVFTVSWSP--NDHQLLTCGQEEAIRRWDVNSGECLHVYEK-TGVGLISCGWFLDGGGIFAGMTDKSIC 384 (532)
Q Consensus 309 ~~~~~-~~h~~~v~~l~~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~ 384 (532)
....+ .+|...|.+++|+| +++++++++.||+|++||++++++...... +...+.+++|+|++.++++|+.||.|+
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 12222 36778999999999 999999999999999999999998776643 455799999999999999999999999
Q ss_pred EEECCCCeEE--EeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeee---ecCCcee--EEEEcCCCCE
Q 009569 385 LWDLDGRELE--SWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWI---EEEEVIT--SFSLSKDNKY 455 (532)
Q Consensus 385 iwd~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~---~~~~~i~--~~~~sp~~~~ 455 (532)
+||++++... .+...|...|.+++|+|++.+|++++ ++.|++||+++.. ..+. .+...+. +++|+|++++
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN 274 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence 9999876543 44443667999999999999999999 5599999999876 1121 1333443 6999999999
Q ss_pred EEEEec-CCeEEEEecCCCCcceeEEeccccceEEEEEccCCC---CCcEEEEEeCCCcEEEEeCCCCC
Q 009569 456 LLVNLI-NQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGF---EQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 456 l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~---d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
|++++. |+.|++|++....+. ... .+ +....| ++ +...+++++.||.+.++-.....
T Consensus 275 l~~~s~~d~~i~v~~~~~~~~~-~~~----~~--~~~~~~-~~~~~~~~~l~~~~~d~~~~~~~~~~~~ 335 (343)
T 3lrv_A 275 MIAYSNESNSLTIYKFDKKTKN-WTK----DE--ESALCL-QSDTADFTDMDVVCGDGGIAAILKTNDS 335 (343)
T ss_dssp EEEEETTTTEEEEEEECTTTCS-EEE----EE--EEECCC-----CCCCEEEEEEETTEEEEEEECSSE
T ss_pred EEEecCCCCcEEEEEEcccccc-eEe----cC--ceeEec-CccccccceeEEEecCCceEEEEecCCe
Confidence 999998 999999999765222 222 12 233455 66 88899999999999998765543
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.1e-27 Score=242.26 Aligned_cols=263 Identities=13% Similarity=0.103 Sum_probs=213.6
Q ss_pred cccCCCCCceeeccCCccCCCCCcceeE-----EcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEe
Q 009569 239 FHNTSDSDFSLYSDHQCGRNRIPSQTLQ-----ILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRL 313 (532)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~ 313 (532)
+....++.+.+|+..+ .+... .+.+|.+.|++++|+|++.++++++.|+.|++||+.++ .....+
T Consensus 138 ~~~~~~~~i~~~d~~~-------g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~---~~~~~~ 207 (433)
T 3bws_A 138 IPLLEDEGMDVLDINS-------GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL---AYKATV 207 (433)
T ss_dssp EEBTTSSSEEEEETTT-------CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC---CEEEEE
T ss_pred EEeCCCCeEEEEECCC-------CeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc---eEEEEE
Confidence 3444455677776443 23333 45689999999999999999999999999999999865 345666
Q ss_pred ecCCCCeEEEEeCCCCCEEEEe-eCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEe--------CCCcEE
Q 009569 314 SGHRKPVFTVSWSPNDHQLLTC-GQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGM--------TDKSIC 384 (532)
Q Consensus 314 ~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~dg~i~ 384 (532)
..|...+.+++|+|++++++++ +.|+.|++||+++++.+..+..+ ..+.+++|+|+++.+++++ .|+.|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~ 286 (433)
T 3bws_A 208 DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLG 286 (433)
T ss_dssp ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEE
T ss_pred cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEE
Confidence 7899999999999999988554 47999999999999988887654 4589999999999999988 488999
Q ss_pred EEECCCCeEEEeecCccCceEEEEEeeCCCEE-EEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEec-
Q 009569 385 LWDLDGRELESWKGQKTLRISDMAITDDGKRI-ISICREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLI- 461 (532)
Q Consensus 385 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~- 461 (532)
+||++++.......+.. .+.+++|+|+++.+ ++++.++.|++||+.+++ .....+...+.+++|+|+++++++++.
T Consensus 287 ~~d~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 287 IYSMDKEKLIDTIGPPG-NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp EEETTTTEEEEEEEEEE-CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECC
T ss_pred EEECCCCcEEeeccCCC-CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecC
Confidence 99999877666554433 78999999999755 556899999999999877 555567788999999999999998876
Q ss_pred --------------CCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeC-CCcEEEEeCCC
Q 009569 462 --------------NQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSE-DSQVNIFLSFS 518 (532)
Q Consensus 462 --------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~-dg~i~iw~~~~ 518 (532)
||.|++||+.++ +.+..+..+.. +..++| +|++++|++++. |+.|++|+++.
T Consensus 366 ~~~~~~~~~~~g~~dg~v~~~d~~~~-~~~~~~~~~~~---~~~~~~-s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 366 PNHPTEGYLKKGLVLGKVYVIDTTTD-TVKEFWEAGNQ---PTGLDV-SPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CCCTTTCTTSCCSSCCEEEEEETTTT-EEEEEEECSSS---EEEEEE-CTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCccccccccccccceEEEEEECCCC-cEEEEecCCCC---CceEEE-cCCCCEEEEEECCCCeEEEEEecC
Confidence 579999999987 77888776543 244566 999999988875 99999999864
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=5.7e-28 Score=243.70 Aligned_cols=273 Identities=14% Similarity=0.206 Sum_probs=188.2
Q ss_pred ccccccCCCCCceeeccCCccCCCCCc-ceeE-----EcccccccEEEEEEcc-CCCEEEEEeCCCeEEEEEeecCCeeE
Q 009569 236 SCLFHNTSDSDFSLYSDHQCGRNRIPS-QTLQ-----ILEAHSDEVWFLQFSH-DGKYLASSSKDQSAIIWEVKEDGQVS 308 (532)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~l~~h~~~V~~v~~s~-~g~~las~s~dg~i~iwd~~~~~~~~ 308 (532)
..+++++.++.+.+|+........... .... ...+|...|++++|+| ++.+|++++.||.|++||+.++.
T Consensus 57 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--- 133 (408)
T 4a11_B 57 RYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ--- 133 (408)
T ss_dssp CEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE---
T ss_pred CEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc---
Confidence 445677778889999765432211110 0111 1246999999999999 78899999999999999998763
Q ss_pred EEEEeecCCCCeEEEEeCCC---CCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCe-EEEEeCCCcEE
Q 009569 309 LKHRLSGHRKPVFTVSWSPN---DHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGG-IFAGMTDKSIC 384 (532)
Q Consensus 309 ~~~~~~~h~~~v~~l~~s~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~ 384 (532)
....+. +...+.++.|+|. +.++++++.|+.|++||+++++.+..+..|...|.+++|+|+++. +++|+.||.|+
T Consensus 134 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~ 212 (408)
T 4a11_B 134 TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVK 212 (408)
T ss_dssp EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEE
Confidence 334333 7788999999985 459999999999999999999999999999999999999999985 88999999999
Q ss_pred EEECCCCe--EEEee--------------cCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--------------
Q 009569 385 LWDLDGRE--LESWK--------------GQKTLRISDMAITDDGKRIISICREAAILLLDREANF-------------- 434 (532)
Q Consensus 385 iwd~~~~~--~~~~~--------------~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-------------- 434 (532)
+||++... ...+. ..+...|.+++|+|+++++++++.|+.|++||+.++.
T Consensus 213 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 292 (408)
T 4a11_B 213 LWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSK 292 (408)
T ss_dssp EEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCS
T ss_pred EEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceecccccccccc
Confidence 99997542 22221 3455589999999999999999999999999987643
Q ss_pred -----------------------------------eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeE
Q 009569 435 -----------------------------------ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSR 479 (532)
Q Consensus 435 -----------------------------------~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 479 (532)
..+..|...|++++|+|++++|++++.||.|++||+.+. +.+..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~-~~~~~ 371 (408)
T 4a11_B 293 KGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY-EPVPD 371 (408)
T ss_dssp SCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred ccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC-CccCC
Confidence 112347789999999999999999999999999999987 66655
Q ss_pred EeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 480 YKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 480 ~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
...+... ..+.......+.+.+.|+.+++|+...
T Consensus 372 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 372 DDETTTK-----SQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp ---------------------------------------
T ss_pred CCceEec-----cccccccceeecccCccCceeecCCcc
Confidence 4443322 112123445566778899999998653
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9e-29 Score=251.64 Aligned_cols=229 Identities=10% Similarity=0.079 Sum_probs=180.9
Q ss_pred EEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEE
Q 009569 266 QILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWD 345 (532)
Q Consensus 266 ~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 345 (532)
+.+++|...|++++|+|+| .++.+.+|+..... ...+ .|...|.+++|||+|.+|++++.||.|++||
T Consensus 46 ~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~----~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd 113 (588)
T 2j04_A 46 KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNG----LLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFK 113 (588)
T ss_dssp SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC----SSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred ceecCCCccEEEEEECCCC-------CcceEEEEeCCCce----Eeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEe
Confidence 3446777777777777777 45555555543211 1111 4578899999999999999999999999999
Q ss_pred CCCCcEEEEeeccCC-----ceEEEEEeeCCCeEEEEeCCCcEEEEECCCCe--------EEEee---cCccCceEEEEE
Q 009569 346 VNSGECLHVYEKTGV-----GLISCGWFLDGGGIFAGMTDKSICLWDLDGRE--------LESWK---GQKTLRISDMAI 409 (532)
Q Consensus 346 ~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------~~~~~---~~~~~~v~~~~~ 409 (532)
..+ ++..+. |.. .+.+++|+|||++|++|+.||+|++||+.++. +..+. ..|...|.+++|
T Consensus 114 ~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVaw 190 (588)
T 2j04_A 114 DNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVW 190 (588)
T ss_dssp TTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEE
T ss_pred CCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEE
Confidence 644 666666 654 49999999999999999999999999998763 34442 445569999999
Q ss_pred eeCCCEEEEEECCCeEEEEECCCCce-----ee-eecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEecc
Q 009569 410 TDDGKRIISICREAAILLLDREANFE-----RW-IEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGH 483 (532)
Q Consensus 410 s~~~~~l~~~~~dg~I~iwd~~~~~~-----~~-~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 483 (532)
+||| +++++.|+.|++||+.+... .+ ..|...|.+++|+ +++|++++ ++.|++||+.++ +......+|
T Consensus 191 SPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~-~~~~~~~gh 264 (588)
T 2j04_A 191 YEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNY-SISSLKTGS 264 (588)
T ss_dssp ETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTT-EEEEEECSC
T ss_pred cCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCC-eEEEEEcCC
Confidence 9999 88899999999999988762 23 2677899999999 68999887 799999999887 443333389
Q ss_pred ccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCC
Q 009569 484 KRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSF 517 (532)
Q Consensus 484 ~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~ 517 (532)
...++.+.+.- +|++..|+++++||+ ++|..+
T Consensus 265 ~~~V~~va~~~-s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 265 LENFHIIPLNH-EKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CSCCCEEEETT-CSSCEEEEECSSCEE-EEEESS
T ss_pred CceEEEEEeee-CCCCCEEEEEcCCCC-EEEeec
Confidence 88877755433 789999999999999 999986
No 115
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-28 Score=273.32 Aligned_cols=250 Identities=11% Similarity=0.040 Sum_probs=197.4
Q ss_pred EcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCee--E-EEEEee-----cCCCCeEEEEeCCCCCEEEEeeCC
Q 009569 267 ILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQV--S-LKHRLS-----GHRKPVFTVSWSPNDHQLLTCGQE 338 (532)
Q Consensus 267 ~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~--~-~~~~~~-----~h~~~v~~l~~s~~~~~l~s~~~d 338 (532)
.+.+|...+.+++|+|++++||+|+.|++|++||+.++... . ....+. +|...|.+++|+||+++||+|+.|
T Consensus 430 ~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~D 509 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIET 509 (902)
T ss_dssp SCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETT
T ss_pred cccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecC
Confidence 36677788888888999999999999999999999865310 0 111122 799999999999999999999999
Q ss_pred CcEEEEECCCC---------------------------------------------cEEEEeeccCCceEEEEEeeCCCe
Q 009569 339 EAIRRWDVNSG---------------------------------------------ECLHVYEKTGVGLISCGWFLDGGG 373 (532)
Q Consensus 339 g~i~iwd~~~~---------------------------------------------~~~~~~~~~~~~i~~~~~~~~~~~ 373 (532)
|+|++||+.++ +++..+..|.+.|++++|+|+| +
T Consensus 510 gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~ 588 (902)
T 2oaj_A 510 GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-F 588 (902)
T ss_dssp SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-E
T ss_pred cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-E
Confidence 99999999766 2467788899999999999999 9
Q ss_pred EEEEeCCCcEEEEECCCCeEEE---e--e-cCccCceEEEEEe-----eCC---CEEEEEECCCeEEEEEC---CCCc--
Q 009569 374 IFAGMTDKSICLWDLDGRELES---W--K-GQKTLRISDMAIT-----DDG---KRIISICREAAILLLDR---EANF-- 434 (532)
Q Consensus 374 l~~~~~dg~i~iwd~~~~~~~~---~--~-~~~~~~v~~~~~s-----~~~---~~l~~~~~dg~I~iwd~---~~~~-- 434 (532)
|++|+.|++|++||+++..+.. . . ..|...|++++|+ ||| .+|++++.|++|++||+ .++.
T Consensus 589 lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~ 668 (902)
T 2oaj_A 589 VGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFD 668 (902)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEE
T ss_pred EEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEE
Confidence 9999999999999999876642 1 1 1455689999999 885 79999999999999998 5554
Q ss_pred eeeeec-----CCceeEEE-Ec----------------------CCCCEEEEEecCCeEEEEecCCCCcceeEEeccccc
Q 009569 435 ERWIEE-----EEVITSFS-LS----------------------KDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRA 486 (532)
Q Consensus 435 ~~~~~~-----~~~i~~~~-~s----------------------p~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 486 (532)
..+.+| ..+|.+++ |+ +++..|+++ +..|+||++.++ ++.++...|...
T Consensus 669 ~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~-k~~~k~~~~~~~ 745 (902)
T 2oaj_A 669 VQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKS-KSTHKGFKYPLA 745 (902)
T ss_dssp EEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCC-CEEEEECSSCEE
T ss_pred EEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccc-cceeeEccccee
Confidence 344444 46777776 65 445444443 788999999987 777777666533
Q ss_pred eEEEE-Ec------cCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 487 RFVIR-SC------FGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 487 ~~~i~-~~------~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
+..+. +. | ++++..|++++.||.|++|++.+.+.
T Consensus 746 ~~~v~~~~~~~~~~~-~~~~~~l~~~~~~g~i~~~s~p~l~~ 786 (902)
T 2oaj_A 746 ATGLSYISTVEKNND-RKNLTVIITLEINGHLRVFTIPDFKE 786 (902)
T ss_dssp EEEEEEEEEECSSSC-EEEEEEEEEEETTSEEEEEETTTCCE
T ss_pred eeEEEEEEecccccc-ccCceEEEEEeCCCcEEEEECcchHH
Confidence 22221 12 4 78899999999999999999998764
No 116
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=2.3e-26 Score=224.01 Aligned_cols=253 Identities=13% Similarity=0.167 Sum_probs=195.8
Q ss_pred CCcceeEEccc--ccc--cEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEe
Q 009569 260 IPSQTLQILEA--HSD--EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTC 335 (532)
Q Consensus 260 ~~~~~~~~l~~--h~~--~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~ 335 (532)
+|..+.++|.+ ..+ ...+|+||+++ +||+| .|++|+|||+.++... ....+.+|...|.+++|+|++++|++|
T Consensus 9 ~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~-~~~~~~~~~~~V~~v~~~~~~~~l~sg 85 (318)
T 4ggc_A 9 IPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDIL-QLLQMEQPGEYISSVAWIKEGNYLAVG 85 (318)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEE-EEEECCSTTCCEEEEEECTTSSEEEEE
T ss_pred cCCCCCEEeeCCCCcccccceEEEECCCC-EEEEE-eCCEEEEEECCCCCEE-EEEEecCCCCeEEEEEECCCCCEEEEE
Confidence 44455555542 222 35789999986 77766 5999999999976433 334456788899999999999999999
Q ss_pred eCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCC-eEEEeecCccCceEEEEEeeCCC
Q 009569 336 GQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGR-ELESWKGQKTLRISDMAITDDGK 414 (532)
Q Consensus 336 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~ 414 (532)
+.||+|++||+++++++..+.+|...+.++. +++..+++++.++.+++|+.... ........+...+..+.++++++
T Consensus 86 s~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~--~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (318)
T 4ggc_A 86 TSSAEVQLWDVQQQKRLRNMTSHSARVGSLS--WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR 163 (318)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEE--EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred ECCCcEEEeecCCceeEEEecCccceEEEee--cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCC
Confidence 9999999999999999999999988776654 46789999999999999998753 33333444555899999999999
Q ss_pred EEEEEECCCeEEEEECCCCc------eeeeecCCceeEEEEcCCCCEE---EEEecCCeEEEEecCCCCcceeEEecccc
Q 009569 415 RIISICREAAILLLDREANF------ERWIEEEEVITSFSLSKDNKYL---LVNLINQEIHLWSIESDPKLVSRYKGHKR 485 (532)
Q Consensus 415 ~l~~~~~dg~I~iwd~~~~~------~~~~~~~~~i~~~~~sp~~~~l---~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 485 (532)
++++++.|+.|++||+++++ .....+...|.++.++|++..+ ++++.++.|++||.... ....... +..
T Consensus 164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~-~~~~~~~-~~~ 241 (318)
T 4ggc_A 164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-ACLSAVD-AHS 241 (318)
T ss_dssp EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC-CEEEEEE-CSS
T ss_pred EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccc-ccccccc-cee
Confidence 99999999999999998765 3344567889999999977543 35567899999999887 4444443 333
Q ss_pred ceEEEEEccCCCCCcEEEEEe--CCCcEEEEeCCCCCce
Q 009569 486 ARFVIRSCFGGFEQAFIASGS--EDSQVNIFLSFSPFAK 522 (532)
Q Consensus 486 ~~~~i~~~~~s~d~~~l~sgs--~dg~i~iw~~~~~~~~ 522 (532)
.+ ...+| ++++..+++++ .||.|++||+.++...
T Consensus 242 ~v--~~~~~-~~~~~~~~~~sg~~d~~i~iwd~~~~~~~ 277 (318)
T 4ggc_A 242 QV--CSILW-SPHYKELISGHGFAQNQLVIWKYPTMAKV 277 (318)
T ss_dssp CE--EEEEE-ETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred ee--eeeee-cccccceEEEEEcCCCEEEEEECCCCcEE
Confidence 32 33555 77777776654 7999999999987643
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=7.3e-27 Score=223.60 Aligned_cols=237 Identities=9% Similarity=0.126 Sum_probs=175.5
Q ss_pred cEEEEEEccCCC---EEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCC-------------------------eEEEEe
Q 009569 274 EVWFLQFSHDGK---YLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKP-------------------------VFTVSW 325 (532)
Q Consensus 274 ~V~~v~~s~~g~---~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~-------------------------v~~l~~ 325 (532)
.+.++.|-..|- .+++++. ..|++|+..++.+++..+++..|..+ |..++|
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 356677766443 5667764 59999999988777888888888764 455666
Q ss_pred CCC----CCEEEEeeC--------------------CCcEEEEEC-CCCcEEEEeeccCCceEEEEEee---CCCeEEEE
Q 009569 326 SPN----DHQLLTCGQ--------------------EEAIRRWDV-NSGECLHVYEKTGVGLISCGWFL---DGGGIFAG 377 (532)
Q Consensus 326 s~~----~~~l~s~~~--------------------dg~i~iwd~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~ 377 (532)
+|| ++.+++++. |+.|++|++ .+|+.+..+..|...+..++|+| ++..|++|
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSg 199 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGT 199 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEE
T ss_pred CCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEe
Confidence 777 667776553 888999999 55888888888888899999999 77999999
Q ss_pred eCCCcEEEEECCCCeE-EEeecCcc--CceEEEEEeeCCCEE------------EEEECCCeEEEEECCCCce-eee---
Q 009569 378 MTDKSICLWDLDGREL-ESWKGQKT--LRISDMAITDDGKRI------------ISICREAAILLLDREANFE-RWI--- 438 (532)
Q Consensus 378 ~~dg~i~iwd~~~~~~-~~~~~~~~--~~v~~~~~s~~~~~l------------~~~~~dg~I~iwd~~~~~~-~~~--- 438 (532)
+.|++|++||+++++. ..+..++. ..+.+++|+|+|.++ ++|+.|++|++||..+++. ...
T Consensus 200 S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~ 279 (356)
T 2w18_A 200 TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYC 279 (356)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEEC
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEee
Confidence 9999999999997654 44443332 367888999999876 5677899999999998872 211
Q ss_pred ---ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEe
Q 009569 439 ---EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFL 515 (532)
Q Consensus 439 ---~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~ 515 (532)
+|...+.+..+ ++.++++++.|++|+|||+.++ +++.++.+|...+.. .++| +|||++|++|+.|++|+|||
T Consensus 280 ~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tG-k~l~tL~gH~~~vvs-~vaf-SPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 280 LPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLG-QCTALLPPVSDQHWS-FVKW-SGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp CCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTC-SEEEEECCC--CCCC-EEEE-CSSSSEEEEECTTSCEEEEE
T ss_pred ccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCC-cEEEEecCCCCCeEE-EEEE-CCCCCEEEEEECCCcEEEec
Confidence 33333443344 3788999999999999999998 899999998775331 2466 99999999999999999998
Q ss_pred C
Q 009569 516 S 516 (532)
Q Consensus 516 ~ 516 (532)
+
T Consensus 355 ~ 355 (356)
T 2w18_A 355 Y 355 (356)
T ss_dssp E
T ss_pred C
Confidence 5
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.1e-27 Score=241.66 Aligned_cols=222 Identities=11% Similarity=0.155 Sum_probs=179.1
Q ss_pred cccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCC-----CeEEEEeCCCCCEEEEeeCCCcEEEE
Q 009569 270 AHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRK-----PVFTVSWSPNDHQLLTCGQEEAIRRW 344 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~-----~v~~l~~s~~~~~l~s~~~dg~i~iw 344 (532)
.|...|++++|||+|++||+++.||+|++||... ....+. |.. .|.+++|||||++|++|+.||+|++|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFF 156 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 5688999999999999999999999999999542 555566 665 49999999999999999999999999
Q ss_pred ECCCCc-------EEEEe----eccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeE----EEeecCccCceEEEEE
Q 009569 345 DVNSGE-------CLHVY----EKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGREL----ESWKGQKTLRISDMAI 409 (532)
Q Consensus 345 d~~~~~-------~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~ 409 (532)
|+.++. .+.++ .+|...|.+++|+|+| +++++.|++|++||+.++.. ..+...+...|.+++|
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEE
Confidence 999885 35666 5667899999999999 88899999999999987653 2343455568999999
Q ss_pred eeCCCEEEEEECCCeEEEEECCCCce-eee-ecCCceeEEEE--cCCCCEEEEEecCCeEEEEecCC-----CC------
Q 009569 410 TDDGKRIISICREAAILLLDREANFE-RWI-EEEEVITSFSL--SKDNKYLLVNLINQEIHLWSIES-----DP------ 474 (532)
Q Consensus 410 s~~~~~l~~~~~dg~I~iwd~~~~~~-~~~-~~~~~i~~~~~--sp~~~~l~~~~~dg~i~iwd~~~-----~~------ 474 (532)
+ |+.+++++ ++.|++||+.++.. ... +|...+..++| +|++..+++++.+|+ ++|.... ..
T Consensus 235 s--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~ 310 (588)
T 2j04_A 235 V--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYL 310 (588)
T ss_dssp E--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHH
T ss_pred E--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEc
Confidence 9 68888887 69999999998883 444 89999999999 999999999999999 9998632 10
Q ss_pred -----------cceeEEeccccceEEEEEccCCCCCcEEEEEeC
Q 009569 475 -----------KLVSRYKGHKRARFVIRSCFGGFEQAFIASGSE 507 (532)
Q Consensus 475 -----------~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~ 507 (532)
..+..+.+ ...+..+.| +|||+.+|+++.
T Consensus 311 d~~v~lW~~~g~~l~~~~~---~~~I~~va~-SPdG~~lA~~~~ 350 (588)
T 2j04_A 311 EKKFKKWSTIWNEFNNYET---TLVIHGISL-SPDGYSIAIVYD 350 (588)
T ss_dssp HHHHHHTTTTTTSSSSSCC---EEEEEEEEE-CTTSSEEEEEEE
T ss_pred CCEEEEEECCCCceeeecc---ceEEEEEEE-CCCCCEEEEEEe
Confidence 11111211 122333556 999999998875
No 119
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=3.5e-27 Score=240.81 Aligned_cols=236 Identities=17% Similarity=0.272 Sum_probs=193.7
Q ss_pred cccccCCCCCceeeccCCccCCC---CCcceeEEcccccccEEEEEEccCCC-EEEEEeCCCeEEEEEeecCCe----eE
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNR---IPSQTLQILEAHSDEVWFLQFSHDGK-YLASSSKDQSAIIWEVKEDGQ----VS 308 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~h~~~V~~v~~s~~g~-~las~s~dg~i~iwd~~~~~~----~~ 308 (532)
.+++++.++.+.+|+........ -...++..+.+|...|++++|+|++. +|++|+.||.|++|++.++.. ..
T Consensus 143 ~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 222 (430)
T 2xyi_A 143 VIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVID 222 (430)
T ss_dssp EEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEE
T ss_pred EEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceec
Confidence 45566778888888765421111 11456778889999999999999988 999999999999999986321 22
Q ss_pred EEEEeecCCCCeEEEEeCC-CCCEEEEeeCCCcEEEEECCCC---cEEEEeeccCCceEEEEEeeCCC-eEEEEeCCCcE
Q 009569 309 LKHRLSGHRKPVFTVSWSP-NDHQLLTCGQEEAIRRWDVNSG---ECLHVYEKTGVGLISCGWFLDGG-GIFAGMTDKSI 383 (532)
Q Consensus 309 ~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i 383 (532)
....+.+|...|.+++|+| ++.+|++++.||.|++||++++ +.+..+..|...|.+++|+|++. .+++|+.||.|
T Consensus 223 ~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v 302 (430)
T 2xyi_A 223 AKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV 302 (430)
T ss_dssp CSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred cceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeE
Confidence 3456778999999999999 6789999999999999999987 57778888999999999999887 58899999999
Q ss_pred EEEECCC-Ce-EEEeecCccCceEEEEEeeCCC-EEEEEECCCeEEEEECCCC--------------c--eeeeecCCce
Q 009569 384 CLWDLDG-RE-LESWKGQKTLRISDMAITDDGK-RIISICREAAILLLDREAN--------------F--ERWIEEEEVI 444 (532)
Q Consensus 384 ~iwd~~~-~~-~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~I~iwd~~~~--------------~--~~~~~~~~~i 444 (532)
++||++. .. +..+. .+...|.+++|+|++. ++++++.|+.|++||+... . .....|...|
T Consensus 303 ~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 381 (430)
T 2xyi_A 303 ALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 381 (430)
T ss_dssp EEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE
T ss_pred EEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCc
Confidence 9999986 33 34444 3455899999999985 7999999999999999872 2 3344678889
Q ss_pred eEEEEcCCCC-EEEEEecCCeEEEEecCCC
Q 009569 445 TSFSLSKDNK-YLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 445 ~~~~~sp~~~-~l~~~~~dg~i~iwd~~~~ 473 (532)
++++|+|+++ +|++++.||.|++|++...
T Consensus 382 ~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 382 SDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred eEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 9999999999 8999999999999999764
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.8e-26 Score=220.91 Aligned_cols=195 Identities=14% Similarity=0.046 Sum_probs=149.0
Q ss_pred cccEEEEEEccC----CCEEEEEeC--------------------CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCC
Q 009569 272 SDEVWFLQFSHD----GKYLASSSK--------------------DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSP 327 (532)
Q Consensus 272 ~~~V~~v~~s~~----g~~las~s~--------------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~ 327 (532)
...|++++|+|| ++++++++. |+.|++|++..++ +.+..+.+|...+..++|+|
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG--~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDG--GGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTS--CEEEEEEECCCSSCEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCC--ceeeeeccCCCceeeEEeec
Confidence 346778888888 888887653 8888888886433 34556678888888888988
Q ss_pred ---CCCEEEEeeCCCcEEEEECCCCcEEEEeeccC---CceEEEEEeeCCCeE------------EEEeCCCcEEEEECC
Q 009569 328 ---NDHQLLTCGQEEAIRRWDVNSGECLHVYEKTG---VGLISCGWFLDGGGI------------FAGMTDKSICLWDLD 389 (532)
Q Consensus 328 ---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l------------~~~~~dg~i~iwd~~ 389 (532)
++.+|++++.|++|+|||+.+|++++++..|. ..+.+++|+|+|.++ ++|+.|++|++||..
T Consensus 189 ~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 189 VQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp EETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred cCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 77899999999999999999999999998653 357778999999886 557789999999999
Q ss_pred CCeEEEee-----cCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCcee-EEEEcCCCCEEEEEec
Q 009569 390 GRELESWK-----GQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVIT-SFSLSKDNKYLLVNLI 461 (532)
Q Consensus 390 ~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~-~~~~sp~~~~l~~~~~ 461 (532)
++...... ..+...+.+. +.++..+++++.|++|+|||+.+++ ..+.+|...+. +++|+|||++|++|+.
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg--~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEG--DVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEE--EEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CCEEEEEEEeeccCCCcceeEcc--ccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 87654432 2333334433 3347899999999999999999988 45556766544 6899999999999999
Q ss_pred CCeEEEEec
Q 009569 462 NQEIHLWSI 470 (532)
Q Consensus 462 dg~i~iwd~ 470 (532)
|++|+|||+
T Consensus 347 D~TIklWd~ 355 (356)
T 2w18_A 347 DGNIFVYHY 355 (356)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEecC
Confidence 999999996
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.4e-27 Score=256.07 Aligned_cols=230 Identities=18% Similarity=0.310 Sum_probs=195.7
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccC--CCEEEEEeCCCeEEEEEeecCCeeEEEEEee
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHD--GKYLASSSKDQSAIIWEVKEDGQVSLKHRLS 314 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~--g~~las~s~dg~i~iwd~~~~~~~~~~~~~~ 314 (532)
.+++++.++.+.+|+... ...+.+..+.+|.+.|++++|+|+ +++|++|+.||.|++||+.++ .......+.
T Consensus 23 ~latg~~dg~I~vwd~~~-----~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~-~~~~~~~~~ 96 (753)
T 3jro_A 23 RLATCSSDKTIKIFEVEG-----ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG-RWSQIAVHA 96 (753)
T ss_dssp CEEEEETTTEEEEEEEET-----TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT-EEEEEEEEC
T ss_pred eEEEEECCCcEEEEecCC-----CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC-ccccccccc
Confidence 445566677778886431 124667889999999999999998 999999999999999999965 344677788
Q ss_pred cCCCCeEEEEeCCC--CCEEEEeeCCCcEEEEECCCCc--EEEEeeccCCceEEEEEee-------------CCCeEEEE
Q 009569 315 GHRKPVFTVSWSPN--DHQLLTCGQEEAIRRWDVNSGE--CLHVYEKTGVGLISCGWFL-------------DGGGIFAG 377 (532)
Q Consensus 315 ~h~~~v~~l~~s~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~ 377 (532)
+|...|.+++|+|+ +.++++|+.||.|++||+.++. ....+..|...|.+++|+| ++..+++|
T Consensus 97 ~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg 176 (753)
T 3jro_A 97 VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 176 (753)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEE
T ss_pred CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEE
Confidence 99999999999999 9999999999999999998873 3456678899999999999 58999999
Q ss_pred eCCCcEEEEECCCC----eEEEeecCccCceEEEEEeeC---CCEEEEEECCCeEEEEECCCCc-------eeeeecCCc
Q 009569 378 MTDKSICLWDLDGR----ELESWKGQKTLRISDMAITDD---GKRIISICREAAILLLDREANF-------ERWIEEEEV 443 (532)
Q Consensus 378 ~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~I~iwd~~~~~-------~~~~~~~~~ 443 (532)
+.||.|++||+++. ........|...|.+++|+|+ ++++++++.||.|++||+.+.. .....+...
T Consensus 177 s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 256 (753)
T 3jro_A 177 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV 256 (753)
T ss_dssp ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSC
T ss_pred ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCc
Confidence 99999999999764 444444556669999999999 8999999999999999998863 223457888
Q ss_pred eeEEEEcCCCCEEEEEecCCeEEEEecCC
Q 009569 444 ITSFSLSKDNKYLLVNLINQEIHLWSIES 472 (532)
Q Consensus 444 i~~~~~sp~~~~l~~~~~dg~i~iwd~~~ 472 (532)
|++++|+|+++++++++.||.|++||+..
T Consensus 257 v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 257 LWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred eEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 99999999999999999999999999974
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=4.9e-26 Score=232.10 Aligned_cols=254 Identities=9% Similarity=0.047 Sum_probs=205.7
Q ss_pred ceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEE--EeecCCCCeEEEEeCCCCCEEEEeeCCCc
Q 009569 263 QTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKH--RLSGHRKPVFTVSWSPNDHQLLTCGQEEA 340 (532)
Q Consensus 263 ~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~--~~~~h~~~v~~l~~s~~~~~l~s~~~dg~ 340 (532)
+.+..+..+ ..+.+++|+|++.++++++.|+.|++||+.++....... .+.+|...|.+++|+|++.++++++.|+.
T Consensus 114 ~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 192 (433)
T 3bws_A 114 RFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANA 192 (433)
T ss_dssp EEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTE
T ss_pred eEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCE
Confidence 344555544 445699999988888888899999999998764321111 34578899999999999999999999999
Q ss_pred EEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEE-eCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEE
Q 009569 341 IRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAG-MTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISI 419 (532)
Q Consensus 341 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 419 (532)
|++||+++++.+..+..|...+.+++|+|+++.++++ +.|+.|++||++++........+. .+.+++|+|+++.++++
T Consensus 193 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~ 271 (433)
T 3bws_A 193 VHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG-LPRGLLLSKDGKELYIA 271 (433)
T ss_dssp EEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-EEEEEEECTTSSEEEEE
T ss_pred EEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-CceEEEEcCCCCEEEEE
Confidence 9999999999999998888999999999999988654 479999999998877665555544 69999999999999998
Q ss_pred E--------CCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEE-EEEecCCeEEEEecCCCCcceeEEeccccceEE
Q 009569 420 C--------REAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYL-LVNLINQEIHLWSIESDPKLVSRYKGHKRARFV 489 (532)
Q Consensus 420 ~--------~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 489 (532)
+ .|+.|++||+.+++ .....+...+.+++|+|+++++ ++++.++.|++||+.++ +.+..+. +...+
T Consensus 272 ~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~-~~~~~~~-~~~~~-- 347 (433)
T 3bws_A 272 QFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK-KVQKSIP-VFDKP-- 347 (433)
T ss_dssp EEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT-EEEEEEE-CSSSE--
T ss_pred ECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC-cEEEEec-CCCCC--
Confidence 8 48899999999887 4555666789999999999755 55688999999999987 6777766 33332
Q ss_pred EEEccCCCCCcEEEEEeC---------------CCcEEEEeCCCCCcee
Q 009569 490 IRSCFGGFEQAFIASGSE---------------DSQVNIFLSFSPFAKK 523 (532)
Q Consensus 490 i~~~~~s~d~~~l~sgs~---------------dg~i~iw~~~~~~~~~ 523 (532)
..++| +|++++|++++. ||.|++||+.+++...
T Consensus 348 ~~~~~-s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 348 NTIAL-SPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp EEEEE-CTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred CeEEE-cCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 34666 999999888876 5799999998876443
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=6.4e-27 Score=235.91 Aligned_cols=230 Identities=17% Similarity=0.176 Sum_probs=168.8
Q ss_pred cccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEcc--------CCCEEEEEeCCCeEEEEEeecCCeeE
Q 009569 237 CLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSH--------DGKYLASSSKDQSAIIWEVKEDGQVS 308 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~--------~g~~las~s~dg~i~iwd~~~~~~~~ 308 (532)
.+.+++.|..+.+|+..... .....++..+.+|.+.|++++|+| |+++||+|+.|++|+|||+.++ .
T Consensus 103 ~las~~~d~~v~lw~~~~~~--~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~---~ 177 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNET--IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE---G 177 (393)
T ss_dssp EEEEEETTSCEEEEEEETTE--EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT---E
T ss_pred EEEEEeCCCcEEEEECCCCc--cceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC---c
Confidence 45577788899999754321 111234556899999999999998 8899999999999999999866 3
Q ss_pred EEEEeecCCCCeEEEEeCCCC-CEEEEeeCCCcEEEEECCCCcEEEEe-------------------------eccCCce
Q 009569 309 LKHRLSGHRKPVFTVSWSPND-HQLLTCGQEEAIRRWDVNSGECLHVY-------------------------EKTGVGL 362 (532)
Q Consensus 309 ~~~~~~~h~~~v~~l~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~-------------------------~~~~~~i 362 (532)
....+..|..+|.+++|+|++ .+|++++.|++|++||+++++..... .+|...+
T Consensus 178 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 178 PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 445666788999999999987 48999999999999999887654322 2456778
Q ss_pred EEEEEe-eCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceE------------------EEEEee--CCCEEEEEEC
Q 009569 363 ISCGWF-LDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRIS------------------DMAITD--DGKRIISICR 421 (532)
Q Consensus 363 ~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~------------------~~~~s~--~~~~l~~~~~ 421 (532)
.++.|+ |+++.+++++.|+.+++||+...........+...+. ...++| ++.++++++.
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~ 337 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ 337 (393)
T ss_dssp SEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT
T ss_pred eeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC
Confidence 889987 7999999999999999999976443222221111222 223333 3346677788
Q ss_pred CCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCC
Q 009569 422 EAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIES 472 (532)
Q Consensus 422 dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~ 472 (532)
||.|++||..++. .....|..+|.+++|+|||++|++++.+| +.+|.+..
T Consensus 338 Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp TTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred CCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 9999999999877 56678889999999999999999998555 77776643
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=2.4e-25 Score=221.22 Aligned_cols=232 Identities=12% Similarity=0.113 Sum_probs=176.5
Q ss_pred ccEEEEEEccCCCEE-EEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCC-c
Q 009569 273 DEVWFLQFSHDGKYL-ASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSG-E 350 (532)
Q Consensus 273 ~~V~~v~~s~~g~~l-as~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~-~ 350 (532)
..+..+++.++++++ ++++.|++|++||..++ +.+..+. |...|.++.|+++. ++++ .++.|++||+.++ +
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~---~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~ 131 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK---QDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWK 131 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTT---EEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCC
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCC---cEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCce
Confidence 358889999988887 46778899999999876 3444554 66789999998764 4443 4789999999988 6
Q ss_pred EEEEeeccCCceEEEEEeeCCCeEEE--EeCCCcEEEEECCCCe-----------------EEEeecCccCceEEEEEee
Q 009569 351 CLHVYEKTGVGLISCGWFLDGGGIFA--GMTDKSICLWDLDGRE-----------------LESWKGQKTLRISDMAITD 411 (532)
Q Consensus 351 ~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~-----------------~~~~~~~~~~~v~~~~~s~ 411 (532)
.+..+.. +...+++++ ..+++ |+.||.|++||+++.. +.. ...|...|.+++|+|
T Consensus 132 ~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~-~~~h~~~v~~~~~s~ 205 (355)
T 3vu4_A 132 RITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVL-IKAHTNPIKMVRLNR 205 (355)
T ss_dssp BSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEE-ECCCSSCEEEEEECT
T ss_pred eeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEE-EEccCCceEEEEECC
Confidence 6666554 444566666 56665 5889999999998754 333 345556999999999
Q ss_pred CCCEEEEEECCCe-EEEEECCCCc--eeee-e-cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCc-ceeEEec---
Q 009569 412 DGKRIISICREAA-ILLLDREANF--ERWI-E-EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPK-LVSRYKG--- 482 (532)
Q Consensus 412 ~~~~l~~~~~dg~-I~iwd~~~~~--~~~~-~-~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~--- 482 (532)
+|++|++++.|++ |++||++++. ..+. + |...|.+++|+|++++|++++.|+.|++||+..... ....+..
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~ 285 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWIN 285 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEE
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceee
Confidence 9999999999998 9999999887 3444 3 889999999999999999999999999999976411 1111111
Q ss_pred ------------------cccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 483 ------------------HKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 483 ------------------~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
..... ..++| ++++++|++++.||.+++|++..+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~--~~~a~-~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 286 MKYFQSEWSLCNFKLSVDKHVRG--CKIAW-ISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CCCCCCSSCSEEEECCCCTTCCC--CEEEE-SSSSEEEEEETTTTEEEEEEEEEET
T ss_pred ccccccccceeEEEeccCCCCCc--eEEEE-eCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 00111 22456 8999999999999999999987643
No 125
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=6.5e-26 Score=225.10 Aligned_cols=227 Identities=14% Similarity=0.232 Sum_probs=180.4
Q ss_pred ccccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeec
Q 009569 236 SCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSG 315 (532)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~ 315 (532)
..++.++.++.+.+|+.... .......+.+|.+.|++++|+|++++|++|+.||.|++||+.++. . ..+..
T Consensus 55 ~~l~~~~~dg~i~iw~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~-~~~~~ 125 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQDS-----GQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ---A-IQIAQ 125 (368)
T ss_dssp EEEEEEETTSEEEEEEECTT-----SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---E-EEEEE
T ss_pred eEEEEECCCCcEEEEEcCCC-----CceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC---c-eeecc
Confidence 35566667778888875431 123337788999999999999999999999999999999998653 2 23567
Q ss_pred CCCCeEEEEe--CCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccC----------------------------------
Q 009569 316 HRKPVFTVSW--SPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTG---------------------------------- 359 (532)
Q Consensus 316 h~~~v~~l~~--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------------------------------- 359 (532)
|...|.+++| +|++.+|++++.||.|++||+++++.+..+..+.
T Consensus 126 ~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 205 (368)
T 3mmy_A 126 HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFR 205 (368)
T ss_dssp CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEE
T ss_pred ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhh
Confidence 9999999999 9999999999999999999999888766655332
Q ss_pred -------CceEEEEEeeCCCe----EEEEeCCCcEEEEECCCC----eEEEeecCccC-----------ceEEEEEeeCC
Q 009569 360 -------VGLISCGWFLDGGG----IFAGMTDKSICLWDLDGR----ELESWKGQKTL-----------RISDMAITDDG 413 (532)
Q Consensus 360 -------~~i~~~~~~~~~~~----l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~-----------~v~~~~~s~~~ 413 (532)
..+.++.+.++... +++++.||.|++||++.. ....+..+... .|.+++|+|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 285 (368)
T 3mmy_A 206 RIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH 285 (368)
T ss_dssp ECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT
T ss_pred hccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCC
Confidence 23445555555544 999999999999999864 22333333221 59999999999
Q ss_pred CEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecC
Q 009569 414 KRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 414 ~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~ 471 (532)
++|++++.||.|++||+.++. ..+..|...|++++|+|++++|++++.|+..+.|++.
T Consensus 286 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 286 GTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp CCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred CEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 999999999999999999887 5566789999999999999999999998865555543
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=1.5e-24 Score=217.97 Aligned_cols=226 Identities=9% Similarity=0.100 Sum_probs=184.5
Q ss_pred CEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEE-EEeeCCCcEEEEECCCCcEEEEeeccCCceE
Q 009569 285 KYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQL-LTCGQEEAIRRWDVNSGECLHVYEKTGVGLI 363 (532)
Q Consensus 285 ~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~ 363 (532)
..+++++.|+.|++||+.++ +....+..|. .+.+++|+|+++++ ++++.|+.|++||+.+++.+..+..+. .+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~---~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~ 77 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN---KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQ 77 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT---EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEE
T ss_pred EEEEEcCCCCEEEEEECCCC---eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Ccc
Confidence 46788999999999999876 4555666664 48999999999977 667789999999999999988887655 899
Q ss_pred EEEEeeCCCeEEEE-eCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEE-EEEECCCeEEEEECCCCc-eeeeec
Q 009569 364 SCGWFLDGGGIFAG-MTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRI-ISICREAAILLLDREANF-ERWIEE 440 (532)
Q Consensus 364 ~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~I~iwd~~~~~-~~~~~~ 440 (532)
+++|+|++++++++ +.++.|++||+.+++.......+. .+.+++|+|+++.+ ++++.++.|++||+.+++ ......
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 156 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV 156 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec
Confidence 99999999988655 467999999999877766555544 78999999999977 677789999999999887 444455
Q ss_pred CCceeEEEEcCCCCEE-EEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEe---CCCcEEEEeC
Q 009569 441 EEVITSFSLSKDNKYL-LVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGS---EDSQVNIFLS 516 (532)
Q Consensus 441 ~~~i~~~~~sp~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs---~dg~i~iw~~ 516 (532)
...+.+++|+|+++++ ++++.++.|++||+.++ +.+..+..+. . ...++| +|++++|++++ .++.|++||+
T Consensus 157 ~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~~-~--~~~~~~-~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 157 GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN-SVIDTVKVEA-A--PSGIAV-NPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEECSS-E--EEEEEE-CTTSSEEEEEEECSSCCEEEEEET
T ss_pred CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-eEEEEEecCC-C--ccceEE-CCCCCEEEEEecCcCCCcEEEEEC
Confidence 5677999999999988 56678899999999987 6666666443 2 344566 99999999888 6899999999
Q ss_pred CCCCc
Q 009569 517 FSPFA 521 (532)
Q Consensus 517 ~~~~~ 521 (532)
.++..
T Consensus 232 ~~~~~ 236 (391)
T 1l0q_A 232 GTNKI 236 (391)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 98754
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=5.2e-25 Score=223.42 Aligned_cols=260 Identities=11% Similarity=0.115 Sum_probs=202.7
Q ss_pred Cceeecc--CCccCCCCCccee--EEcccccccEEEEEEcc--------------CCCEEEEEeCC------CeEEEEEe
Q 009569 246 DFSLYSD--HQCGRNRIPSQTL--QILEAHSDEVWFLQFSH--------------DGKYLASSSKD------QSAIIWEV 301 (532)
Q Consensus 246 ~~~~~~~--~~~~~~~~~~~~~--~~l~~h~~~V~~v~~s~--------------~g~~las~s~d------g~i~iwd~ 301 (532)
.+.+|+. .+ .+++ ..+.+|...+..+++++ .+..++.++.+ +.|++||+
T Consensus 94 ~i~lwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~ 166 (415)
T 2hqs_A 94 AYQLVDTGGAP-------GTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDY 166 (415)
T ss_dssp EEEEEECSSST-------TCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEET
T ss_pred EEEEEeCCCCC-------CCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcC
Confidence 6778875 33 3444 45788988888888775 15667666554 79999999
Q ss_pred ecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCC---cEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEE-EE
Q 009569 302 KEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEE---AIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIF-AG 377 (532)
Q Consensus 302 ~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~ 377 (532)
... . ...+.+|...+.+++|+|||++|++++.++ .|++||+.+++.. .+..+...+.+++|+|||+.|+ ++
T Consensus 167 ~g~-~---~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 167 DGY-N---QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp TSC-S---CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CCC-C---CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEE
Confidence 743 2 355667889999999999999999999875 9999999999875 4566777899999999999888 56
Q ss_pred eCCCc--EEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECC-C--eEEEEECCCCc-eeeeecCCceeEEEEcC
Q 009569 378 MTDKS--ICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICRE-A--AILLLDREANF-ERWIEEEEVITSFSLSK 451 (532)
Q Consensus 378 ~~dg~--i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g--~I~iwd~~~~~-~~~~~~~~~i~~~~~sp 451 (532)
+.++. |++||++++....+..+. ..+.+++|+|||+.|++++.+ + .|++||+.++. ..+..+...+.+++|+|
T Consensus 242 ~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~sp 320 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQIRQVTDGR-SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSS 320 (415)
T ss_dssp CTTSSCEEEEEETTTCCEEECCCCS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECT
T ss_pred ecCCCceEEEEECCCCCEEeCcCCC-CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECC
Confidence 65554 999999988776655544 489999999999999988864 4 68888998877 44556677899999999
Q ss_pred CCCEEEEEecC---CeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCC---cEEEEeCCCCCceee
Q 009569 452 DNKYLLVNLIN---QEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDS---QVNIFLSFSPFAKKI 524 (532)
Q Consensus 452 ~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg---~i~iw~~~~~~~~~~ 524 (532)
+|++|++++.+ ..|++||+.++ +. ..+..+. . +....| +|||++|++++.++ .|++||+.++....+
T Consensus 321 dG~~l~~~~~~~g~~~i~~~d~~~~-~~-~~l~~~~-~--~~~~~~-spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 321 DGKFMVMVSSNGGQQHIAKQDLATG-GV-QVLSSTF-L--DETPSL-APNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp TSSEEEEEEECSSCEEEEEEETTTC-CE-EECCCSS-S--CEEEEE-CTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred CCCEEEEEECcCCceEEEEEECCCC-CE-EEecCCC-C--cCCeEE-cCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 99999988865 58999999887 44 4455554 3 344566 99999999998877 799999987654443
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=5.7e-23 Score=208.36 Aligned_cols=226 Identities=12% Similarity=0.132 Sum_probs=181.0
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCC---eEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEE-EeeC
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQ---SAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLL-TCGQ 337 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~-s~~~ 337 (532)
......+.+|...|.+++|+|||++||+++.++ .|++||+.++.. ..+..|...+.+++|+|||++|+ +++.
T Consensus 168 g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~----~~l~~~~~~~~~~~~spdg~~la~~~~~ 243 (415)
T 2hqs_A 168 GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV----RQVASFPRHNGAPAFSPDGSKLAFALSK 243 (415)
T ss_dssp SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE----EEEECCSSCEEEEEECTTSSEEEEEECT
T ss_pred CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE----EEeecCCCcccCEEEcCCCCEEEEEEec
Confidence 345677788999999999999999999999875 999999987632 34567888999999999999888 6666
Q ss_pred CCc--EEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeC-CC--cEEEEECCCCeEEEeecCccCceEEEEEeeC
Q 009569 338 EEA--IRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMT-DK--SICLWDLDGRELESWKGQKTLRISDMAITDD 412 (532)
Q Consensus 338 dg~--i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 412 (532)
++. |++||+.+++. ..+..+...+.+++|+|||+.|++++. ++ .|++||+.++.......+ ...+.+++|+|+
T Consensus 244 ~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~-~~~~~~~~~spd 321 (415)
T 2hqs_A 244 TGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE-GSQNQDADVSSD 321 (415)
T ss_dssp TSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS-SSEEEEEEECTT
T ss_pred CCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC-CCcccCeEECCC
Confidence 654 99999998876 566677888999999999999998876 44 688889988766554433 347899999999
Q ss_pred CCEEEEEECC---CeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCC---eEEEEecCCCCcceeEEecccc
Q 009569 413 GKRIISICRE---AAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQ---EIHLWSIESDPKLVSRYKGHKR 485 (532)
Q Consensus 413 ~~~l~~~~~d---g~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~ 485 (532)
|++|++++.+ ..|++||+.++. ..+..+ ..+.+++|+|+|++|++++.++ .|++||+.+ .....+.+|..
T Consensus 322 G~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g--~~~~~l~~~~~ 398 (415)
T 2hqs_A 322 GKFMVMVSSNGGQQHIAKQDLATGGVQVLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG--RFKARLPATDG 398 (415)
T ss_dssp SSEEEEEEECSSCEEEEEEETTTCCEEECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTS--CCEEECCCSSS
T ss_pred CCEEEEEECcCCceEEEEEECCCCCEEEecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC--CcEEEeeCCCC
Confidence 9999988864 589999999887 333333 4899999999999999988777 799999875 46778888877
Q ss_pred ceEEEEEccCCCCC
Q 009569 486 ARFVIRSCFGGFEQ 499 (532)
Q Consensus 486 ~~~~i~~~~~s~d~ 499 (532)
.+. ..+| +|..
T Consensus 399 ~v~--~~~~-~~~~ 409 (415)
T 2hqs_A 399 QVK--FPAW-SPYL 409 (415)
T ss_dssp EEE--EEEE-CCCC
T ss_pred CCc--CCcc-cccc
Confidence 643 3555 6654
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=3.4e-22 Score=196.42 Aligned_cols=272 Identities=9% Similarity=0.103 Sum_probs=191.4
Q ss_pred CCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCC-CeEEEEEeec-CCeeEEEEEeecCCCC
Q 009569 242 TSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKD-QSAIIWEVKE-DGQVSLKHRLSGHRKP 319 (532)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~d-g~i~iwd~~~-~~~~~~~~~~~~h~~~ 319 (532)
..++.+.+|+..... ..+.+.. ..|...+.+++|+|+|++|++++.+ +.|.+|++.. .+.......+..+. .
T Consensus 12 ~~~~~v~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 12 PESQQIHVWNLNHEG----ALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp GGGTEEEEEEECTTS----CEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred CCCCeEEEEEECCCC----cEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 556778888653211 0122333 3477789999999999999988876 9999999972 23444555555544 7
Q ss_pred eEEEEeCCCCCEEEEeeC-CCcEEEEECC---CCcEEEEeeccCCceEEEEEeeCCCeEEEEe-CCCcEEEEECCC-CeE
Q 009569 320 VFTVSWSPNDHQLLTCGQ-EEAIRRWDVN---SGECLHVYEKTGVGLISCGWFLDGGGIFAGM-TDKSICLWDLDG-REL 393 (532)
Q Consensus 320 v~~l~~s~~~~~l~s~~~-dg~i~iwd~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~ 393 (532)
+..++|+|++++|++++. ++.|.+||+. +.+.+..+.. ...+.+++|+|+++++++++ .++.|.+||+.+ +.+
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 889999999998877765 7899999994 3344444443 34588899999999888877 899999999986 544
Q ss_pred E-----EeecCccCceEEEEEeeCCCEEEEEE-CCCeEEEEECCC--Ccee---eee-------cCCceeEEEEcCCCCE
Q 009569 394 E-----SWKGQKTLRISDMAITDDGKRIISIC-REAAILLLDREA--NFER---WIE-------EEEVITSFSLSKDNKY 455 (532)
Q Consensus 394 ~-----~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~iwd~~~--~~~~---~~~-------~~~~i~~~~~sp~~~~ 455 (532)
. .........+.+++|+|+++++++++ .++.|.+||+.. +... ... ....+..++|+|++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 3 22333334788999999999776665 789999999954 3211 111 1234668999999998
Q ss_pred EEEEe-cCCeEEEEecCC--C-CcceeEEeccccceEEEEEccCCCCCcEEEEEe-CCCcEEEEeC--CCCCceee
Q 009569 456 LLVNL-INQEIHLWSIES--D-PKLVSRYKGHKRARFVIRSCFGGFEQAFIASGS-EDSQVNIFLS--FSPFAKKI 524 (532)
Q Consensus 456 l~~~~-~dg~i~iwd~~~--~-~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs-~dg~i~iw~~--~~~~~~~~ 524 (532)
|+++. .++.|.+||+.. + .+.+..+..+... ..++| +|++++|++++ .++.|.+|++ .++....+
T Consensus 245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~---~~~~~-s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 316 (343)
T 1ri6_A 245 LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQP---RGFNV-DHSGKYLIAAGQKSHHISVYEIVGEQGLLHEK 316 (343)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSC---CCEEE-CTTSSEEEEECTTTCEEEEEEEETTTTEEEEE
T ss_pred EEEEecCCCEEEEEEEcCCCCceEEeeeecCCCcc---ceEEE-CCCCCEEEEecCCCCeEEEEEEcCCCceeeEc
Confidence 87554 789999999983 2 1344445444332 33556 99999888887 6899999954 46655444
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=4.4e-22 Score=195.12 Aligned_cols=271 Identities=12% Similarity=0.127 Sum_probs=192.4
Q ss_pred ccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeC-CCeEEEEEeecCCeeEEEEEeecCCC
Q 009569 240 HNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSK-DQSAIIWEVKEDGQVSLKHRLSGHRK 318 (532)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~-dg~i~iwd~~~~~~~~~~~~~~~h~~ 318 (532)
+...++.+.+|+..+ .+....+..+...+ +++|+|+|+++++++. ++.|.+||..++.. ....+..+..
T Consensus 15 ~~~~~~~v~~~d~~~-------~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~ 84 (331)
T 3u4y_A 15 VEQHLRRISFFSTDT-------LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP--KVVAIQEGQS 84 (331)
T ss_dssp EEGGGTEEEEEETTT-------CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC--EEEEEEECSS
T ss_pred EecCCCeEEEEeCcc-------cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce--eEEecccCCC
Confidence 445556777776443 44555556666667 9999999997766655 89999999987643 1445556666
Q ss_pred CeEEEEeCCCCCEEEEeeCCC---cEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEE-eCCCc-EEEEECCCC-e
Q 009569 319 PVFTVSWSPNDHQLLTCGQEE---AIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAG-MTDKS-ICLWDLDGR-E 392 (532)
Q Consensus 319 ~v~~l~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~-i~iwd~~~~-~ 392 (532)
+..+++|+|++++++++..++ .|.+||+.+++.+..+..+ ..+.+++|+|+|++++++ ..++. |.+|++... .
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~ 163 (331)
T 3u4y_A 85 SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGV 163 (331)
T ss_dssp CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCC
T ss_pred CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCc
Confidence 666699999999999655553 8999999999988877654 456899999999866655 45578 999998642 2
Q ss_pred E----EEeecCccCceEEEEEeeCCCEEEEEE-CCCeEEEEECCCCc----eeeeecCCceeEEEEcCCCCEEEEEe-cC
Q 009569 393 L----ESWKGQKTLRISDMAITDDGKRIISIC-REAAILLLDREANF----ERWIEEEEVITSFSLSKDNKYLLVNL-IN 462 (532)
Q Consensus 393 ~----~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~iwd~~~~~----~~~~~~~~~i~~~~~sp~~~~l~~~~-~d 462 (532)
+ .... .....+..++|+|+|+++++++ .++.|.+||+.++. .........+..++|+|||+++++++ .+
T Consensus 164 ~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 242 (331)
T 3u4y_A 164 LFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTEST 242 (331)
T ss_dssp EEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSE
T ss_pred EeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCC
Confidence 2 1112 2223689999999999766655 68999999998766 23344566788999999999877665 47
Q ss_pred CeEEEEecCCCCcc--eeEEecc----ccceEE-EEEccCCCCCcEEEEEeC-CCcEEEEeCCCCCceee
Q 009569 463 QEIHLWSIESDPKL--VSRYKGH----KRARFV-IRSCFGGFEQAFIASGSE-DSQVNIFLSFSPFAKKI 524 (532)
Q Consensus 463 g~i~iwd~~~~~~~--~~~~~~~----~~~~~~-i~~~~~s~d~~~l~sgs~-dg~i~iw~~~~~~~~~~ 524 (532)
+.|.+||+.++ +. +..+..+ ...... ..++| +||+++|++++. ++.|.+|++.+.....+
T Consensus 243 ~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 243 VDVFNFNQLSG-TLSFVKSFGHGLLIDPRPLFGANQMAL-NKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp EEEEEEETTTT-EEEEEEEEECCCCCCCGGGTTCCCEEE-CTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred CEEEEEECCCC-ceeeecccccccccCCCCcccccceEE-CCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 78999999887 44 3333322 111110 11355 999998866555 66999999988654433
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=1.2e-21 Score=204.92 Aligned_cols=266 Identities=11% Similarity=0.063 Sum_probs=199.9
Q ss_pred ccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEe--ecCCeeEEEEEeec
Q 009569 238 LFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEV--KEDGQVSLKHRLSG 315 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~--~~~~~~~~~~~~~~ 315 (532)
++++..++.+.+|+..+ .+++..+..+.. +.+++|+|||++|++++.|++|.+||+ .++ +....+.
T Consensus 152 ~vs~~~d~~V~v~D~~t-------~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~---~~~~~i~- 219 (543)
T 1nir_A 152 SVTLRDAGQIALVDGDS-------KKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEP---TKVAEIK- 219 (543)
T ss_dssp EEEEGGGTEEEEEETTT-------CCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSC---EEEEEEE-
T ss_pred EEEEcCCCeEEEEECCC-------ceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCC---cEEEEEe-
Confidence 33455566777775443 566777773333 899999999999999999999999999 554 4555665
Q ss_pred CCCCeEEEEeCC----CCCEEEEeeC-CCcEEEEECCCCcEEEEeecc-----------CCceEEEEEeeCCCeE-EEEe
Q 009569 316 HRKPVFTVSWSP----NDHQLLTCGQ-EEAIRRWDVNSGECLHVYEKT-----------GVGLISCGWFLDGGGI-FAGM 378 (532)
Q Consensus 316 h~~~v~~l~~s~----~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~l-~~~~ 378 (532)
+...+..++|+| ||+++++++. +++|.+||..+++++..+..+ ...+.++.++|++..+ ++..
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 445679999999 9999999885 899999999999998887642 2368899999977655 4556
Q ss_pred CCCcEEEEECCCCeE---EEeecCccCceEEEEEeeCCCEEEEEE-CCCeEEEEECCCCc-eeeee-----cCCceeEEE
Q 009569 379 TDKSICLWDLDGREL---ESWKGQKTLRISDMAITDDGKRIISIC-REAAILLLDREANF-ERWIE-----EEEVITSFS 448 (532)
Q Consensus 379 ~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~iwd~~~~~-~~~~~-----~~~~i~~~~ 448 (532)
.++.|.+||+.+... .... ....+.+++|+|+|+++++++ .+++|.+||..+++ ..... |......+
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~--~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~- 376 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIG--AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF- 376 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEE--CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-
T ss_pred CCCeEEEEEecCCCcceeEEec--cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-
Confidence 789999999976321 1222 233688999999999877665 58999999999987 22222 33333333
Q ss_pred EcCC-CCEEEEEe-cCCeEEEEecCC-------CCcceeEEeccccceEEEEEccCCCCCcEEEEEe-------CCCcEE
Q 009569 449 LSKD-NKYLLVNL-INQEIHLWSIES-------DPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGS-------EDSQVN 512 (532)
Q Consensus 449 ~sp~-~~~l~~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs-------~dg~i~ 512 (532)
++|+ +..++++. .|++|.+||+.+ . +.++++.+|...... +.+ +|++++|++++ .+++|.
T Consensus 377 ~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~-~~v~~l~~~g~~~~~--v~~-~pdg~~l~v~~~~~~~~~~~~~v~ 452 (543)
T 1nir_A 377 VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAW-KKVAELQGQGGGSLF--IKT-HPKSSHLYVDTTFNPDARISQSVA 452 (543)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT-SEEEEEECSCSCCCC--EEC-CTTCCEEEECCTTCSSHHHHTCEE
T ss_pred CCCCCccEEEeccCCCceEEEEEeCCCCCchhcC-eEEEEEEcCCCCceE--EEc-CCCCCcEEEecCCCCCcccCceEE
Confidence 5777 55566664 579999999987 4 889999988765333 445 99999999987 378999
Q ss_pred EEeCCCCCce
Q 009569 513 IFLSFSPFAK 522 (532)
Q Consensus 513 iw~~~~~~~~ 522 (532)
+||+.+++..
T Consensus 453 v~d~~~~~~~ 462 (543)
T 1nir_A 453 VFDLKNLDAK 462 (543)
T ss_dssp EEETTCTTSC
T ss_pred EEECCCCCCC
Confidence 9999987654
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=2.9e-22 Score=192.09 Aligned_cols=249 Identities=13% Similarity=0.093 Sum_probs=182.2
Q ss_pred CCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeec-CCeeEEEEEeecC-CCC
Q 009569 242 TSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKE-DGQVSLKHRLSGH-RKP 319 (532)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~-~~~~~~~~~~~~h-~~~ 319 (532)
..+..+.+|+... .....+..|...|.+++|+|+|++|++++ ++.|++||+.+ +.. ......| ...
T Consensus 19 ~~~~~i~~~d~~~--------~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~---~~~~~~~~~~~ 86 (297)
T 2ojh_A 19 SMRSSIEIFNIRT--------RKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP---EKVDTGFATIC 86 (297)
T ss_dssp CCCEEEEEEETTT--------TEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC---EECCCTTCCCB
T ss_pred CcceeEEEEeCCC--------CceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc---eEecccccccc
Confidence 4455677776432 23345666899999999999999999986 78999999986 532 2333444 467
Q ss_pred eEEEEeCCCCCEEEEeeC--CC--cEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEE-EEeCCCcEEEEEC--CCCe
Q 009569 320 VFTVSWSPNDHQLLTCGQ--EE--AIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIF-AGMTDKSICLWDL--DGRE 392 (532)
Q Consensus 320 v~~l~~s~~~~~l~s~~~--dg--~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~--~~~~ 392 (532)
+.+++|+|++++|++++. ++ .|..|+..++. ...+..+. .+..++|+|+++.++ ++..++.+.+|++ .++.
T Consensus 87 ~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 87 NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV 164 (297)
T ss_dssp CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCc
Confidence 889999999999999983 34 45555555555 34444333 488899999999887 6778898899885 4555
Q ss_pred EEEeecCccCceEEEEEeeCCCEEEEEE-CCCeEEEEECC--CCc-eeeeecCCceeEEEEcCCCCEEEEEecC------
Q 009569 393 LESWKGQKTLRISDMAITDDGKRIISIC-REAAILLLDRE--ANF-ERWIEEEEVITSFSLSKDNKYLLVNLIN------ 462 (532)
Q Consensus 393 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~iwd~~--~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~d------ 462 (532)
......+. ..+.+++|+|+++.+++++ .++.+.+|++. ... ..+..+...+.+++|+|++++|++++.+
T Consensus 165 ~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 243 (297)
T 2ojh_A 165 ETRLTHGE-GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDH 243 (297)
T ss_dssp EEECCCSS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSC
T ss_pred ceEcccCC-CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcc
Confidence 55544433 4899999999999888776 58889999875 233 4555667789999999999999988765
Q ss_pred -----CeEEEEecCCCCcc--eeEEeccccceEEEEEccCCCCCcEEEEEeCCC
Q 009569 463 -----QEIHLWSIESDPKL--VSRYKGHKRARFVIRSCFGGFEQAFIASGSEDS 509 (532)
Q Consensus 463 -----g~i~iwd~~~~~~~--~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg 509 (532)
+.|++||+.++ +. +..+.+|...+. .+.| +|++++|++++.|.
T Consensus 244 ~~~~~~~l~~~d~~~~-~~~~~~~~~~~~~~~~--~~~~-spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 244 PRDLDVRVQLMDMDGG-NVETLFDLFGGQGTMN--SPNW-SPDGDEFAYVRYFP 293 (297)
T ss_dssp CSSEEEEEEEEETTSC-SCEEEEEEEESTTTSC--SCCB-CTTSSEEEEEEECC
T ss_pred cccCceEEEEEecCCC-CceeeeccCCCCcccc--cceE-CCCCCEEEEEEecc
Confidence 56999999876 44 333445655533 2556 99999998887764
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=9.8e-22 Score=192.64 Aligned_cols=264 Identities=11% Similarity=0.112 Sum_probs=193.7
Q ss_pred ccccCCCCCceeeccCCccCCCCCcceeEEcc-cccc-cEEEEEEccCCCEE-EEEeCCCeEEEEEeecCCeeEEEEEee
Q 009569 238 LFHNTSDSDFSLYSDHQCGRNRIPSQTLQILE-AHSD-EVWFLQFSHDGKYL-ASSSKDQSAIIWEVKEDGQVSLKHRLS 314 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~h~~-~V~~v~~s~~g~~l-as~s~dg~i~iwd~~~~~~~~~~~~~~ 314 (532)
++....++.+.+|+..+ .+.+..+. ++.. .+.+++|+|+|+++ ++++.++.|.+||+.++.. ...+.
T Consensus 4 ~v~~~~~~~v~~~d~~~-------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~---~~~~~ 73 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEK-------MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET---LGRID 73 (337)
T ss_dssp EEEEETTTEEEEEETTT-------TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE---EEEEE
T ss_pred EEEcCCCCeEEEEECCC-------CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe---EeeEE
Confidence 34556677788886543 34445444 2222 47899999999866 4566689999999987643 23232
Q ss_pred c-C----CCCeEEEEeCCCCCEEEEee------------CCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEE
Q 009569 315 G-H----RKPVFTVSWSPNDHQLLTCG------------QEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAG 377 (532)
Q Consensus 315 ~-h----~~~v~~l~~s~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 377 (532)
. + ...+..++|+|+++++++++ .++.|.+||+.+++.+..+.. ...+.+++|+|++++++++
T Consensus 74 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL 152 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE
T ss_pred cCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe
Confidence 1 1 12567899999999998886 579999999999988877764 4557889999999988888
Q ss_pred eCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCC------------------------eEEEEECCCC
Q 009569 378 MTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREA------------------------AILLLDREAN 433 (532)
Q Consensus 378 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg------------------------~I~iwd~~~~ 433 (532)
++.|++||+.++.......... ....+.|+|++..++..+..+ .|.+||..++
T Consensus 153 --~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 229 (337)
T 1pby_B 153 --GRDLHVMDPEAGTLVEDKPIQS-WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG 229 (337)
T ss_dssp --SSSEEEEETTTTEEEEEECSTT-TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC
T ss_pred --CCeEEEEECCCCcEeeeeeccc-cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC
Confidence 6899999999877654443322 112337899988765544322 4789999987
Q ss_pred ce---eeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCc
Q 009569 434 FE---RWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQ 510 (532)
Q Consensus 434 ~~---~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~ 510 (532)
+. ....+...+.+++|+|++++++++ ++.|++||+.++ +.+..+..+... ..++| +|++++|++++.++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~-~~~~~~~~~~~~---~~~~~-s~dg~~l~~~~~~~~ 302 (337)
T 1pby_B 230 EMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN-ASIKRVPLPHSY---YSVNV-STDGSTVWLGGALGD 302 (337)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT-EEEEEEECSSCC---CEEEE-CTTSCEEEEESBSSE
T ss_pred CceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC-cCcceecCCCce---eeEEE-CCCCCEEEEEcCCCc
Confidence 62 233455678899999999999988 799999999887 777777654332 33566 999999999999999
Q ss_pred EEEEeCCCCCce
Q 009569 511 VNIFLSFSPFAK 522 (532)
Q Consensus 511 i~iw~~~~~~~~ 522 (532)
|++||+.+++..
T Consensus 303 i~v~d~~~~~~~ 314 (337)
T 1pby_B 303 LAAYDAETLEKK 314 (337)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECcCCcEE
Confidence 999999987644
No 134
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=1.1e-20 Score=186.53 Aligned_cols=252 Identities=11% Similarity=0.134 Sum_probs=177.7
Q ss_pred ccccccEEEEEEccCCCEEEEEeC---CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee-CCCcEEEE
Q 009569 269 EAHSDEVWFLQFSHDGKYLASSSK---DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG-QEEAIRRW 344 (532)
Q Consensus 269 ~~h~~~V~~v~~s~~g~~las~s~---dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iw 344 (532)
..+...+..++|+|+|+ |++++. ++.|.+|++.++ ....+..+..+...+..++|+|||++|++++ .++.|.+|
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ-TAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT-EEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC-cEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 34557788899999999 555443 689999999753 4455556566777888999999999988888 67899999
Q ss_pred ECC-CCc--EEEEeecc---------CCceEEEEEeeCCCeEEEEeCCCcEEEEECC-CCeEEEe---ecCccCceEEEE
Q 009569 345 DVN-SGE--CLHVYEKT---------GVGLISCGWFLDGGGIFAGMTDKSICLWDLD-GRELESW---KGQKTLRISDMA 408 (532)
Q Consensus 345 d~~-~~~--~~~~~~~~---------~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~---~~~~~~~v~~~~ 408 (532)
++. ++. .+..+... ...+.+++|+|+|+.+++...++.|.+||+. ++.+... .......+..++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 995 333 23333221 1247889999999966666678899999998 4443322 222333678899
Q ss_pred EeeCCCEEEEE-ECCCeEEEEECCC--Ccee----eeecC------CceeEEEEcCCCCEEEE-EecCCeEEEEecCCCC
Q 009569 409 ITDDGKRIISI-CREAAILLLDREA--NFER----WIEEE------EVITSFSLSKDNKYLLV-NLINQEIHLWSIESDP 474 (532)
Q Consensus 409 ~s~~~~~l~~~-~~dg~I~iwd~~~--~~~~----~~~~~------~~i~~~~~sp~~~~l~~-~~~dg~i~iwd~~~~~ 474 (532)
|+|||++++++ ..++.|.+|++.. +... ..... ..+..++|+|||++|++ +..++.|.+|++....
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g 273 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG 273 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC
Confidence 99999976664 5688999999875 3311 11111 45888999999998855 4558999999997331
Q ss_pred --cceeEEeccccceEEEEEccCCCCCcEEEEEeCC-CcEEEE--eCCCCCceeee
Q 009569 475 --KLVSRYKGHKRARFVIRSCFGGFEQAFIASGSED-SQVNIF--LSFSPFAKKIK 525 (532)
Q Consensus 475 --~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~d-g~i~iw--~~~~~~~~~~~ 525 (532)
..+..+..+.... ..++| +|||++|++++.+ +.|.+| |..++....+.
T Consensus 274 ~~~~~~~~~~~~~~~--~~~~~-spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 274 HLTLIQQISTEGDFP--RDFDL-DPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp CEEEEEEEECSSSCC--CEEEE-CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred cEEEeEEEecCCCCc--CeEEE-CCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 3444555543332 33556 9999998888764 899999 55677766544
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=3.5e-22 Score=218.08 Aligned_cols=238 Identities=9% Similarity=0.045 Sum_probs=183.5
Q ss_pred cccEEEEEEccCCCEEEEEeC-CC-----eEEEEEeecCCeeEEEEEeecCC------------------------CCeE
Q 009569 272 SDEVWFLQFSHDGKYLASSSK-DQ-----SAIIWEVKEDGQVSLKHRLSGHR------------------------KPVF 321 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~-dg-----~i~iwd~~~~~~~~~~~~~~~h~------------------------~~v~ 321 (532)
...|.+++|||||++|++++. |+ .|++||+.++.. ...+..+. ..|.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQT---RLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCE---EEEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCce---eEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 456899999999999999998 88 899999987632 22333322 2378
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEECCCCc--EEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecC
Q 009569 322 TVSWSPNDHQLLTCGQEEAIRRWDVNSGE--CLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQ 399 (532)
Q Consensus 322 ~l~~s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 399 (532)
+++|||||++|++++. +.|++||+.++. ....+..+...+.+++|+|||++|++++ ++.|++||+.++........
T Consensus 113 ~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp CCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC
T ss_pred eeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC
Confidence 9999999999999886 999999999883 3445666778899999999999999887 46899999998877666544
Q ss_pred ccCc----------------eEEEEEeeCCCEEEEEECCC---------------------------------eEEEEEC
Q 009569 400 KTLR----------------ISDMAITDDGKRIISICREA---------------------------------AILLLDR 430 (532)
Q Consensus 400 ~~~~----------------v~~~~~s~~~~~l~~~~~dg---------------------------------~I~iwd~ 430 (532)
.... +.+++|+|||++|++++.|+ .|++||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 3322 47899999999999988765 8999999
Q ss_pred CC-Cce-eee---ecCCceeEEEEcCCCCEEEEEec-----CCeEEEEecCCCCcceeEEeccccce--EEEEEccCCCC
Q 009569 431 EA-NFE-RWI---EEEEVITSFSLSKDNKYLLVNLI-----NQEIHLWSIESDPKLVSRYKGHKRAR--FVIRSCFGGFE 498 (532)
Q Consensus 431 ~~-~~~-~~~---~~~~~i~~~~~sp~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~--~~i~~~~~s~d 498 (532)
.+ +.. ... .+...+.+++| |||++|++++. +..|++||+.++ +....+..+.... ......| +||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~-spd 347 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN-QQRVLAHETSPTWVPLHNSLRF-LDD 347 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC-CEEEEEEEECSSCCCCCSCCEE-CTT
T ss_pred CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC-ceEEEEEcCCCCcCCcCCceEE-CCC
Confidence 88 762 222 36678999999 99999998764 567999999987 6655555443210 0112455 999
Q ss_pred CcEEEEEeCCCcEEEEeCC
Q 009569 499 QAFIASGSEDSQVNIFLSF 517 (532)
Q Consensus 499 ~~~l~sgs~dg~i~iw~~~ 517 (532)
|+++++++.||.+.+|.++
T Consensus 348 g~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRID 366 (741)
T ss_dssp SCEEEEECTTSSCEEEEEC
T ss_pred CeEEEEecCCCccEEEEEc
Confidence 9999999999987777665
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.1e-20 Score=186.68 Aligned_cols=242 Identities=10% Similarity=0.064 Sum_probs=187.1
Q ss_pred ccccEEEEEEccCCCEEEEEeC-------CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEe-eCCCcEE
Q 009569 271 HSDEVWFLQFSHDGKYLASSSK-------DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTC-GQEEAIR 342 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~las~s~-------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~ 342 (532)
....+..++|+|+|+++++++. ++.|.+||..++.. ...+.. ...+..++|+|++++++++ ..++.|.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~---~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~ 114 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEV---TQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVT 114 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCE---EEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeE---EEEEec-CCCcceEEECCCCCEEEEEecCCCEEE
Confidence 4456889999999998888764 56899999987643 333332 2346789999999966554 5578999
Q ss_pred EEECCCCcEEEEeeccCC---------ceEEEEEeeCCCeEEEEe--CCCcEEEEECCCCeEEEeecCccCceEEEEEee
Q 009569 343 RWDVNSGECLHVYEKTGV---------GLISCGWFLDGGGIFAGM--TDKSICLWDLDGRELESWKGQKTLRISDMAITD 411 (532)
Q Consensus 343 iwd~~~~~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~ 411 (532)
+||..+++.+..+..+.. .+.++.|+|+++++++++ .++.|.+||..+.............+.+++|+|
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEET
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECC
Confidence 999999998888775432 278899999999888776 478899999998877666553444688999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCc-eeeee-----cCCceeEEEEcCCCCEEEEEec-CCeEEEEecCCCCcceeEEeccc
Q 009569 412 DGKRIISICREAAILLLDREANF-ERWIE-----EEEVITSFSLSKDNKYLLVNLI-NQEIHLWSIESDPKLVSRYKGHK 484 (532)
Q Consensus 412 ~~~~l~~~~~dg~I~iwd~~~~~-~~~~~-----~~~~i~~~~~sp~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~ 484 (532)
+++.+++++.++.|.+||..+++ ..... +...+.+++|+|+++++++++. ++.|.+||+.++ +.+..+....
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~~ 273 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG-NILAKVAAPE 273 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC-CEEEEEECSS
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEEEEEcCC
Confidence 99999999999999999999887 22221 3456788999999998877765 489999999887 7777776544
Q ss_pred cceEEEEEccCCCCCcEEEEEe-CCCcEEEEeCCCCCce
Q 009569 485 RARFVIRSCFGGFEQAFIASGS-EDSQVNIFLSFSPFAK 522 (532)
Q Consensus 485 ~~~~~i~~~~~s~d~~~l~sgs-~dg~i~iw~~~~~~~~ 522 (532)
. ..+.| +|++++++.++ .++.|.+||..+++..
T Consensus 274 ~----~~~~~-s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 274 S----LAVLF-NPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp C----CCEEE-ETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred C----ceEEE-CCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 3 23455 89998665555 6899999999987643
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=4.3e-21 Score=183.91 Aligned_cols=227 Identities=15% Similarity=0.081 Sum_probs=174.2
Q ss_pred EEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCC-CcEEEEeecc-CCceEEEE
Q 009569 289 SSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNS-GECLHVYEKT-GVGLISCG 366 (532)
Q Consensus 289 s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~-~~~i~~~~ 366 (532)
.++.|++|++||+.++. ...+..|...|.+++|+|++++|++++ ++.|.+||+.+ ++.......+ ...+.+++
T Consensus 17 ~~~~~~~i~~~d~~~~~----~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRK----MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHG 91 (297)
T ss_dssp -CCCCEEEEEEETTTTE----EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCE
T ss_pred CCCcceeEEEEeCCCCc----eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceE
Confidence 35678999999998652 234456888999999999999999976 78999999999 8877666555 36788999
Q ss_pred EeeCCCeEEEEeC--C--CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEE-EEECCCeEEEEECC--CCc-eeee
Q 009569 367 WFLDGGGIFAGMT--D--KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRII-SICREAAILLLDRE--ANF-ERWI 438 (532)
Q Consensus 367 ~~~~~~~l~~~~~--d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~I~iwd~~--~~~-~~~~ 438 (532)
|+|+++++++++. + ..|..|++.++....+.... .+..++|+|+++.++ ++..++.+.+|++. +.. ..+.
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 169 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL--PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT 169 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS--SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC--CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc
Confidence 9999999999883 3 44555566666655444433 589999999999887 67789999999854 344 5555
Q ss_pred ecCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCC---------
Q 009569 439 EEEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSED--------- 508 (532)
Q Consensus 439 ~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~d--------- 508 (532)
.+...+.+++|+|++++|++++ .++.+++|++......+..+..+... +..+.| +|++++|++++.+
T Consensus 170 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~-s~dg~~l~~~~~~~~~~~~~~~ 246 (297)
T 2ojh_A 170 HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYG--DWFPHP-SPSGDKVVFVSYDADVFDHPRD 246 (297)
T ss_dssp CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEE--EEEEEE-CTTSSEEEEEEEETTCCSCCSS
T ss_pred cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcc--cCCeEE-CCCCCEEEEEEcCCCCCccccc
Confidence 6778899999999999888766 48899999987333566677766544 334556 9999999988876
Q ss_pred --CcEEEEeCCCCCceeee
Q 009569 509 --SQVNIFLSFSPFAKKIK 525 (532)
Q Consensus 509 --g~i~iw~~~~~~~~~~~ 525 (532)
+.|++||+.++....+.
T Consensus 247 ~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 247 LDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEEEEEEETTSCSCEEEE
T ss_pred CceEEEEEecCCCCceeee
Confidence 56999999988765443
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.88 E-value=9.6e-21 Score=198.16 Aligned_cols=229 Identities=10% Similarity=0.092 Sum_probs=180.9
Q ss_pred EccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEEC--CCCcEEEEeec
Q 009569 280 FSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDV--NSGECLHVYEK 357 (532)
Q Consensus 280 ~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~ 357 (532)
|+|++.++++++.|++|.+||..++. .+.++..+.. +..++|+|||++|++++.|++|.+||+ .+++++..+.
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~---~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~- 219 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKK---IVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK- 219 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCC---EEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCce---EEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-
Confidence 78899999999999999999998763 4566663333 889999999999999999999999999 8899888887
Q ss_pred cCCceEEEEEee----CCCeEEEEe-CCCcEEEEECCCCeEEEeecC-----------ccCceEEEEEeeCCCE-EEEEE
Q 009569 358 TGVGLISCGWFL----DGGGIFAGM-TDKSICLWDLDGRELESWKGQ-----------KTLRISDMAITDDGKR-IISIC 420 (532)
Q Consensus 358 ~~~~i~~~~~~~----~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-----------~~~~v~~~~~s~~~~~-l~~~~ 420 (532)
+...+..++|+| +|+++++++ .+++|.+||..+.++...... ....+..+.++|++.. +++..
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 455689999999 999999988 489999999987655443322 2236899999997765 55566
Q ss_pred CCCeEEEEECCCCc---eeeeecCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEec----cccceEEEEE
Q 009569 421 REAAILLLDREANF---ERWIEEEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKG----HKRARFVIRS 492 (532)
Q Consensus 421 ~dg~I~iwd~~~~~---~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~i~~ 492 (532)
.++.|.+||..+.. ...+.+...+..+.|+|+|+++++++ .+++|.+||+.++ +++..+.. |.... ..+
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g--~~~ 376 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR-RLSALVDVGKTPHPGRG--ANF 376 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSBCCTTC--EEE
T ss_pred CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC-eEEEeeccCCCCCCCCC--ccc
Confidence 78999999998765 23445667788999999999877665 5889999999998 88888774 43321 112
Q ss_pred ccCCCC-CcEEEEEe-CCCcEEEEeCCC
Q 009569 493 CFGGFE-QAFIASGS-EDSQVNIFLSFS 518 (532)
Q Consensus 493 ~~~s~d-~~~l~sgs-~dg~i~iw~~~~ 518 (532)
+ +|+ +.++++++ .|++|.+|++.+
T Consensus 377 -~-~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 377 -V-HPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp -E-ETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred -C-CCCCccEEEeccCCCceEEEEEeCC
Confidence 2 666 66677765 589999999988
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=2.3e-20 Score=182.82 Aligned_cols=233 Identities=8% Similarity=0.050 Sum_probs=173.2
Q ss_pred EEccCCCE-EEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeC-CCcEEEEECCCCcE-EEEe
Q 009569 279 QFSHDGKY-LASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQ-EEAIRRWDVNSGEC-LHVY 355 (532)
Q Consensus 279 ~~s~~g~~-las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~~-~~~~ 355 (532)
.|.+++.+ +++++.++.|.+||..++. ....+..+...+ .++|+|+++++++++. ++.|.+||..+++. ...+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLE---ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCC---EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccc---eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence 45565554 6788889999999998763 334444556666 9999999997777666 88999999999987 6777
Q ss_pred eccCCceEEEEEeeCCCeEEEEeCCC---cEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEE-ECCCe-EEEEEC
Q 009569 356 EKTGVGLISCGWFLDGGGIFAGMTDK---SICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISI-CREAA-ILLLDR 430 (532)
Q Consensus 356 ~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~-I~iwd~ 430 (532)
..+..+..+++|+|++++++++..++ .|.+||+.++.......... ...+++|+|+|++++++ ..++. |.+|++
T Consensus 80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 80 QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 76666555599999999999655553 89999999877665554433 67999999999865555 55578 999998
Q ss_pred CCCc------eeeeecCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcc---eeEEeccccceEEEEEccCCCCCc
Q 009569 431 EANF------ERWIEEEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKL---VSRYKGHKRARFVIRSCFGGFEQA 500 (532)
Q Consensus 431 ~~~~------~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~i~~~~~s~d~~ 500 (532)
.... .........+..++|+|+|+++++++ .++.|++||+.++ +. +..+..+... ..++| +|||+
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~-~~~~~~~~~~~~~~~---~~~~~-spdg~ 233 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP-ENITLLNAVGTNNLP---GTIVV-SRDGS 233 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST-TSCEEEEEEECSSCC---CCEEE-CTTSS
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC-cccceeeeccCCCCC---ceEEE-CCCCC
Confidence 7533 12223455688999999999766554 5889999999887 66 6666655333 33456 99999
Q ss_pred EEEEEe-CCCcEEEEeCCCCCc
Q 009569 501 FIASGS-EDSQVNIFLSFSPFA 521 (532)
Q Consensus 501 ~l~sgs-~dg~i~iw~~~~~~~ 521 (532)
+++.++ .++.|.+||..+++.
T Consensus 234 ~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 234 TVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EEEEECSSEEEEEEEETTTTEE
T ss_pred EEEEEEcCCCEEEEEECCCCce
Confidence 776554 578899999998866
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=5.4e-21 Score=202.76 Aligned_cols=233 Identities=14% Similarity=0.098 Sum_probs=174.9
Q ss_pred ccccEEEEEEccCCCEEEEEeC-CCeEEEEEeecCCeeEEEEEeecCC-CCeEEEEeCCCCCEEEEeeC---CCcEEEEE
Q 009569 271 HSDEVWFLQFSHDGKYLASSSK-DQSAIIWEVKEDGQVSLKHRLSGHR-KPVFTVSWSPNDHQLLTCGQ---EEAIRRWD 345 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~las~s~-dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~l~~s~~~~~l~s~~~---dg~i~iwd 345 (532)
+..+|++++|+|||++||+++. ||++.||++.++ . ...+..|. ..+..++|+|| +.+++++. +....+|.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g-~---~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG-E---TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT-E---EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCC-C---cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 3567999999999999999887 999999999644 2 24455555 68999999999 77777765 45555655
Q ss_pred CCC---CcEEEEeeccCCceEEEEEeeCCCe-EEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC
Q 009569 346 VNS---GECLHVYEKTGVGLISCGWFLDGGG-IFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR 421 (532)
Q Consensus 346 ~~~---~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 421 (532)
+.. +... .+.... .+...+|+|+++. ++++..++.+.+||+.++.......... .+++|+|||+++++++.
T Consensus 95 ~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp EETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEE
T ss_pred EeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEE
Confidence 432 3322 333222 3446789998864 3344445556699999888776665442 88999999999998887
Q ss_pred C----CeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCC--eEEEEecCCCCcceeEEeccccceEEE----
Q 009569 422 E----AAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQ--EIHLWSIESDPKLVSRYKGHKRARFVI---- 490 (532)
Q Consensus 422 d----g~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~i---- 490 (532)
+ +.|++||+.++. ..+..+...+.+++|||||++|+++..++ .|++||+.++ +.. .+.+|...+..+
T Consensus 170 ~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~-~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG-SVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC-CEE-ECCCSCSHHHHHCCSE
T ss_pred cCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC-cEE-EccCCCcChhhhhhcc
Confidence 7 789999998887 66677888899999999999999888888 8999999887 554 666665432211
Q ss_pred --EEccCCCCCcEEEEEeCCCcEEEEeC
Q 009569 491 --RSCFGGFEQAFIASGSEDSQVNIFLS 516 (532)
Q Consensus 491 --~~~~~s~d~~~l~sgs~dg~i~iw~~ 516 (532)
..+| +|||.++++++.||.+++|++
T Consensus 248 ~~~~~~-spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 248 ITWLGY-LPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEE-CTTSCEEEEEEETTEEEEEET
T ss_pred ccceeE-cCCCcEEEEEEcCCcEEEEEE
Confidence 1125 999999999999999999999
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=4.2e-21 Score=208.89 Aligned_cols=264 Identities=13% Similarity=0.125 Sum_probs=185.2
Q ss_pred CCCCCceeeccCCccCCCCCcceeEEcccccc---cEEEEEEccCCCEEEEEeCC---------CeEEEEEeecCCeeEE
Q 009569 242 TSDSDFSLYSDHQCGRNRIPSQTLQILEAHSD---EVWFLQFSHDGKYLASSSKD---------QSAIIWEVKEDGQVSL 309 (532)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~---~V~~v~~s~~g~~las~s~d---------g~i~iwd~~~~~~~~~ 309 (532)
+.++.+.+|+..+ .+....+.+|.. .|.+++|||||++|++++.+ +.+.+||+.++.. ..
T Consensus 34 ~~dg~i~~~d~~~-------g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~ 105 (723)
T 1xfd_A 34 EQKGTVRLWNVET-------NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QS 105 (723)
T ss_dssp CSSSCEEEBCGGG-------CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EE
T ss_pred eCCCCEEEEECCC-------CcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-Ee
Confidence 4555666775443 344556666665 49999999999999998764 7888999987642 22
Q ss_pred EEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCce------------------EEEEEeeCC
Q 009569 310 KHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGL------------------ISCGWFLDG 371 (532)
Q Consensus 310 ~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i------------------~~~~~~~~~ 371 (532)
+....+|...+..++|||||+.|++++. +.|++||+.+++.......+...+ .+++|+|||
T Consensus 106 l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg 184 (723)
T 1xfd_A 106 LDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG 184 (723)
T ss_dssp CCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS
T ss_pred ccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC
Confidence 2333345556889999999999999886 799999999988776655433323 789999999
Q ss_pred CeEEEEeCCC----------------------------------cEEEEECCCCeE-EEeecC-----ccCceEEEEEee
Q 009569 372 GGIFAGMTDK----------------------------------SICLWDLDGREL-ESWKGQ-----KTLRISDMAITD 411 (532)
Q Consensus 372 ~~l~~~~~dg----------------------------------~i~iwd~~~~~~-~~~~~~-----~~~~v~~~~~s~ 411 (532)
+.|++++.|+ .|++||+.++.. ..+..+ +...+..++|+|
T Consensus 185 ~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp 264 (723)
T 1xfd_A 185 TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT 264 (723)
T ss_dssp SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS
T ss_pred CEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeC
Confidence 9999987543 799999987763 333332 134789999999
Q ss_pred CCCEEEEEEC----CCeEEEEECCCCc-eeee--ecCCce----eEEEEcCCCCEEEE--EecCC------eEEEEec-C
Q 009569 412 DGKRIISICR----EAAILLLDREANF-ERWI--EEEEVI----TSFSLSKDNKYLLV--NLINQ------EIHLWSI-E 471 (532)
Q Consensus 412 ~~~~l~~~~~----dg~I~iwd~~~~~-~~~~--~~~~~i----~~~~~sp~~~~l~~--~~~dg------~i~iwd~-~ 471 (532)
||+++++.+. +..|++||+.+++ .... .+...+ ..++|+|||+.|+. +..++ .|++||+ .
T Consensus 265 Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~ 344 (723)
T 1xfd_A 265 STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQP 344 (723)
T ss_dssp SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSC
T ss_pred CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccC
Confidence 9998877653 3579999998877 2222 233333 37899999997775 44566 5777773 3
Q ss_pred CCCc--ceeEEeccccceEEEE-EccCCCCCcEEEEEeCC---CcEEEEeCCC
Q 009569 472 SDPK--LVSRYKGHKRARFVIR-SCFGGFEQAFIASGSED---SQVNIFLSFS 518 (532)
Q Consensus 472 ~~~~--~~~~~~~~~~~~~~i~-~~~~s~d~~~l~sgs~d---g~i~iw~~~~ 518 (532)
++ . ....+..+...+ .. ..| +|||+.|+..+.+ +.+.+|++..
T Consensus 345 ~~-~~~~~~~l~~~~~~~--~~~~~~-spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 345 NS-SNDNIQSITSGDWDV--TKILAY-DEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp CS-SSCCCCBSCCSSSCE--EEEEEE-ETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred CC-CccceeEeecCCeEE--EeeeEE-cCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 33 3 144444332222 22 355 9999999766555 7899999865
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=1.1e-19 Score=179.49 Aligned_cols=237 Identities=11% Similarity=0.077 Sum_probs=179.0
Q ss_pred ceeEEcccccccEEEEEEccCCCEEE-EEeCCCeEEEEEeecCCeeEEEEEeecCCC---------CeEEEEeCCCCCEE
Q 009569 263 QTLQILEAHSDEVWFLQFSHDGKYLA-SSSKDQSAIIWEVKEDGQVSLKHRLSGHRK---------PVFTVSWSPNDHQL 332 (532)
Q Consensus 263 ~~~~~l~~h~~~V~~v~~s~~g~~la-s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~---------~v~~l~~s~~~~~l 332 (532)
+.+..+.. ...+..++|+|+|++++ ++..++.|.+||..++.. ...+..+.. .+.+++|+|+++++
T Consensus 80 ~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 155 (353)
T 3vgz_A 80 EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEV---KGRLVLDDRKRTEEVRPLQPRELVADDATNTV 155 (353)
T ss_dssp CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCE---EEEEESCCCCCCSSCCCCEEEEEEEETTTTEE
T ss_pred eEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCee---EEEEecCCCccccccCCCCCceEEECCCCCEE
Confidence 44444443 34577899999999655 455679999999987643 344444332 27889999999988
Q ss_pred EEee--CCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecC----ccCceEE
Q 009569 333 LTCG--QEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQ----KTLRISD 406 (532)
Q Consensus 333 ~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~ 406 (532)
++++ .++.|.+||..+++.+..+..+...+.+++|+|+++.+++++.++.|.+||+.++........ +...+.+
T Consensus 156 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 235 (353)
T 3vgz_A 156 YISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFIN 235 (353)
T ss_dssp EEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEE
T ss_pred EEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccce
Confidence 7776 478999999999999888875666688999999999999999999999999988776544332 3336788
Q ss_pred EEEeeCCCEEEEEEC-CCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEecc
Q 009569 407 MAITDDGKRIISICR-EAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKGH 483 (532)
Q Consensus 407 ~~~s~~~~~l~~~~~-dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~ 483 (532)
++|+|+++++++++. ++.|.+||..+++ ........ ...++|+|+++++++++ .++.|.+||+.++ +.+..+...
T Consensus 236 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-~~~~~~~~~ 313 (353)
T 3vgz_A 236 ISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY-KVVKTFDTP 313 (353)
T ss_dssp EEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCCEEEETTTTEEEEEETTTTEEEEEETTTT-EEEEEEECC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-CceEEECCCCCEEEEEECCCCeEEEEECCCC-eEEEEEecC
Confidence 999999998777765 4999999998887 32233222 36799999999776665 6899999999888 777777655
Q ss_pred ccceEEEEEccCCCCCcEEEEEeCCC
Q 009569 484 KRARFVIRSCFGGFEQAFIASGSEDS 509 (532)
Q Consensus 484 ~~~~~~i~~~~~s~d~~~l~sgs~dg 509 (532)
.. ...+.| +|+|++|+.+..++
T Consensus 314 ~~---~~~~~~-s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 314 TH---PNSLAL-SADGKTLYVSVKQK 335 (353)
T ss_dssp SE---EEEEEE-CTTSCEEEEEEECC
T ss_pred CC---CCeEEE-cCCCCEEEEEEccc
Confidence 43 244566 89999877776653
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.87 E-value=5.5e-20 Score=180.61 Aligned_cols=228 Identities=12% Similarity=0.181 Sum_probs=163.9
Q ss_pred EEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC-CcEEEEECC--CCcE--EEEeeccCC
Q 009569 286 YLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE-EAIRRWDVN--SGEC--LHVYEKTGV 360 (532)
Q Consensus 286 ~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-g~i~iwd~~--~~~~--~~~~~~~~~ 360 (532)
.+++++.|+.|++|++...+.......+ .|...+.+++|+|++++|++++.+ +.|.+|++. +++. +..+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-
Confidence 3445578999999999644444444443 467788999999999999988886 899999997 5553 34444433
Q ss_pred ceEEEEEeeCCCeEEEEeC-CCcEEEEECC---CCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCCeEEEEECCC-Cc
Q 009569 361 GLISCGWFLDGGGIFAGMT-DKSICLWDLD---GRELESWKGQKTLRISDMAITDDGKRIISIC-REAAILLLDREA-NF 434 (532)
Q Consensus 361 ~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~iwd~~~-~~ 434 (532)
.+..++|+|+++++++++. ++.|.+||+. ............ .+.+++|+|+++++++++ .++.|.+||+.+ +.
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC-CceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 7889999999998877664 8889999993 333333333333 689999999999888887 899999999987 54
Q ss_pred e------eeee-cCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCC-cc--eeEEe----ccccceEEEEEccCCCCC
Q 009569 435 E------RWIE-EEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDP-KL--VSRYK----GHKRARFVIRSCFGGFEQ 499 (532)
Q Consensus 435 ~------~~~~-~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~-~~--~~~~~----~~~~~~~~i~~~~~s~d~ 499 (532)
. .... ....+.+++|+|+++++++++ .++.|.+||+.... .. ...+. ++........++| +|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~-s~dg 242 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI-TPDG 242 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE-CTTS
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE-CCCC
Confidence 2 1222 344688999999999776655 78999999995421 22 22222 1111222334666 9999
Q ss_pred cEEEE-EeCCCcEEEEeCC
Q 009569 500 AFIAS-GSEDSQVNIFLSF 517 (532)
Q Consensus 500 ~~l~s-gs~dg~i~iw~~~ 517 (532)
++|++ +..++.|++|++.
T Consensus 243 ~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 243 RHLYACDRTASLITVFSVS 261 (343)
T ss_dssp SEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEecCCCEEEEEEEc
Confidence 88774 4579999999998
No 144
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=1.2e-19 Score=180.16 Aligned_cols=248 Identities=14% Similarity=0.146 Sum_probs=175.0
Q ss_pred ccccEEEEEEccCCCEEEEEeCC----CeEEEEEeecC-CeeEEEEEeecCCCCeEEEEeCCCCCEEEEee-CCCcEEEE
Q 009569 271 HSDEVWFLQFSHDGKYLASSSKD----QSAIIWEVKED-GQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG-QEEAIRRW 344 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~las~s~d----g~i~iwd~~~~-~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iw 344 (532)
|...+..++|+|+|++|++++.+ +.|.+|++... +.+..+.....+......+++ ++++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 67788899999999999998875 89999999864 555566666656667788888 788777776 57899999
Q ss_pred ECCCCcEEEEe----e--c--------cCCceEEEEEeeCCCeEEEEe-CCCcEEEEECCCCe-------E------EEe
Q 009569 345 DVNSGECLHVY----E--K--------TGVGLISCGWFLDGGGIFAGM-TDKSICLWDLDGRE-------L------ESW 396 (532)
Q Consensus 345 d~~~~~~~~~~----~--~--------~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~-------~------~~~ 396 (532)
++.....+..+ . + +...+.+++|+|+|+++++++ .++.|.+|++.... + ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754322111 1 1 122357899999999776655 57899999886422 1 122
Q ss_pred ecCccCceEEEEEeeCCCEEEEEE-CCCeEEEEECCCCcee-e--e----ecCCceeEEEEcCCCCEEEEEecC--CeEE
Q 009569 397 KGQKTLRISDMAITDDGKRIISIC-REAAILLLDREANFER-W--I----EEEEVITSFSLSKDNKYLLVNLIN--QEIH 466 (532)
Q Consensus 397 ~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~iwd~~~~~~~-~--~----~~~~~i~~~~~sp~~~~l~~~~~d--g~i~ 466 (532)
.......+..++|+|||+++++++ .++.|.+||+.++... . . .+...+..++|+|||++|+++..+ +.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 233334688999999999888877 6899999999876521 1 1 122346799999999999777654 8999
Q ss_pred EEecC--CCC-cceeEEeccccceEEEEEccCCCCCcEEEEEe-CCCcEEEE--eCCCCCceee
Q 009569 467 LWSIE--SDP-KLVSRYKGHKRARFVIRSCFGGFEQAFIASGS-EDSQVNIF--LSFSPFAKKI 524 (532)
Q Consensus 467 iwd~~--~~~-~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs-~dg~i~iw--~~~~~~~~~~ 524 (532)
+|++. ++. ..+..+.. ... ...++| +|||++|++++ .++.|.+| |..+++...+
T Consensus 286 v~~~~~~~g~~~~~~~~~~-g~~--~~~~~~-spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT-GIH--PRNFII-TPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC-SSC--CCEEEE-CTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred EEEEcCCCCcEEEeeEecC-CCC--CceEEE-CCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 99996 331 23334443 222 233566 99999988887 57889996 4456665544
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=1e-20 Score=206.50 Aligned_cols=235 Identities=13% Similarity=0.109 Sum_probs=179.3
Q ss_pred cEEEEEEccCCCEEEEEeCCCeEEEEEeecCC--eeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcE
Q 009569 274 EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDG--QVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGEC 351 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~--~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 351 (532)
.|.+++|||||++|++++. +.|++||+.++. .. ..+..|...+..++|||||++|++++ ++.|++||+.+++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~---~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAV---RQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSC---CBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceE---EEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE
Confidence 4889999999999999886 899999998651 22 34567888899999999999999987 46999999999877
Q ss_pred EEEeeccCCc----------------eEEEEEeeCCCeEEEEeCCC---------------------------------c
Q 009569 352 LHVYEKTGVG----------------LISCGWFLDGGGIFAGMTDK---------------------------------S 382 (532)
Q Consensus 352 ~~~~~~~~~~----------------i~~~~~~~~~~~l~~~~~dg---------------------------------~ 382 (532)
......+... +.++.|+|||++|++++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 6555443332 47799999999999987765 7
Q ss_pred EEEEECCC-CeEEEeec--CccCceEEEEEeeCCCEEEEEEC-----CCeEEEEECCCCc-eeee-ecCC----ceeEEE
Q 009569 383 ICLWDLDG-RELESWKG--QKTLRISDMAITDDGKRIISICR-----EAAILLLDREANF-ERWI-EEEE----VITSFS 448 (532)
Q Consensus 383 i~iwd~~~-~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~-----dg~I~iwd~~~~~-~~~~-~~~~----~i~~~~ 448 (532)
|++||+.+ +....... .+...+..++| |||+.|++++. +..|++||+.++. .... .+.. .+.+++
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE
Confidence 89999988 76655442 24457999999 99999987764 5679999999887 2222 2322 456899
Q ss_pred EcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEE-ccCCCCCcEEE-EEeCCC--cEEEEeCCC
Q 009569 449 LSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRS-CFGGFEQAFIA-SGSEDS--QVNIFLSFS 518 (532)
Q Consensus 449 ~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~-~~~s~d~~~l~-sgs~dg--~i~iw~~~~ 518 (532)
|+|||+++++++.+|.++||.+..... ...+..+...+. .+ .| +|+++.|+ +++.++ .+++|++..
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~--~~~~~-s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVD--ELLAV-DEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEE--EEEEE-ETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred ECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEE--eEeEE-eCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 999999999999999888887763324 667777665532 33 35 99998775 455555 899998864
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=2e-20 Score=184.35 Aligned_cols=232 Identities=11% Similarity=0.038 Sum_probs=172.5
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCC-CCeEEEEeCCCCCEEE-EeeCCCcEEEEECCCCcEEEE
Q 009569 277 FLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHR-KPVFTVSWSPNDHQLL-TCGQEEAIRRWDVNSGECLHV 354 (532)
Q Consensus 277 ~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~l~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~ 354 (532)
.+++++++.++++++.++.|.+||..++ +....+..+. ..+..++|+|++++++ ++..++.|.+||+.+++.+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD---TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT---EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC---cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence 4567889999999999999999999866 3344444332 2577899999998665 445689999999999988877
Q ss_pred eeccC------CceEEEEEeeCCCeEEEEeCC------------CcEEEEECCCCeE---EEeecCccCceEEEEEeeCC
Q 009569 355 YEKTG------VGLISCGWFLDGGGIFAGMTD------------KSICLWDLDGREL---ESWKGQKTLRISDMAITDDG 413 (532)
Q Consensus 355 ~~~~~------~~i~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~---~~~~~~~~~~v~~~~~s~~~ 413 (532)
+.... ..+.+++|+|+|+++++++.+ +.|.+||+.++.. ........ .+.+++|+|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~s~dg 159 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-QVYLMRAADDG 159 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-SCCCEEECTTS
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-cccceeECCCC
Confidence 76432 236789999999999998865 8999999976321 11222222 68899999999
Q ss_pred CEEEEEECCCeEEEEECCCCc-eeeee-c---------------------------------------------------
Q 009569 414 KRIISICREAAILLLDREANF-ERWIE-E--------------------------------------------------- 440 (532)
Q Consensus 414 ~~l~~~~~dg~I~iwd~~~~~-~~~~~-~--------------------------------------------------- 440 (532)
+ +++++. .|.+||..+++ ..... +
T Consensus 160 ~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 160 S-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp C-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred c-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 9 555543 49999998776 21111 1
Q ss_pred -----------------CCceeEEEEcC-CCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEE
Q 009569 441 -----------------EEVITSFSLSK-DNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFI 502 (532)
Q Consensus 441 -----------------~~~i~~~~~sp-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l 502 (532)
...+.+++|+| ++++++++ ++.|.+||+.++ +.+..+...... ..++| +|++++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~-~~~~~~~~~~~~---~~~~~-s~dg~~l 309 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR-KLIKAANLDHTY---YCVAF-DKKGDKL 309 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT-EEEEEEECSSCC---CEEEE-CSSSSCE
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccC-eEEEEEcCCCCc---cceEE-CCCCCEE
Confidence 01345678889 99999988 889999999987 777776644332 23556 8999988
Q ss_pred EEEeCCCcEEEEeCCCCCce
Q 009569 503 ASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 503 ~sgs~dg~i~iw~~~~~~~~ 522 (532)
++++.++.|++||+.+++..
T Consensus 310 ~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 310 YLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp EEESBSSEEEEEETTTTEEE
T ss_pred EEecCCCeEEEEecccccee
Confidence 88888999999999987543
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=1.6e-21 Score=212.19 Aligned_cols=239 Identities=10% Similarity=0.071 Sum_probs=175.5
Q ss_pred cEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCC---CeEEEEeCCCCCEEEEeeCC---------CcE
Q 009569 274 EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRK---PVFTVSWSPNDHQLLTCGQE---------EAI 341 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~---~v~~l~~s~~~~~l~s~~~d---------g~i 341 (532)
.+.+++|+|||+++++ +.||+|++||+.++.. ...+..|.. .|.+++|||||++|++++.+ +.|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~---~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS---TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC---EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcE---EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 3567899999997776 7899999999997743 344555654 48999999999999999774 788
Q ss_pred EEEECCCCcEEEEee---ccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCc---------------
Q 009569 342 RRWDVNSGECLHVYE---KTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLR--------------- 403 (532)
Q Consensus 342 ~iwd~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--------------- 403 (532)
.+||+.+++. ..+. .+...+..++|+|||+.|+.++. +.|++||+.++........+...
T Consensus 94 ~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 94 VLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEe
Confidence 8999999876 3333 23334888999999999999886 79999999887665554432222
Q ss_pred ---eEEEEEeeCCCEEEEEECCC----------------------------------eEEEEECCCCc--eeeeec----
Q 009569 404 ---ISDMAITDDGKRIISICREA----------------------------------AILLLDREANF--ERWIEE---- 440 (532)
Q Consensus 404 ---v~~~~~s~~~~~l~~~~~dg----------------------------------~I~iwd~~~~~--~~~~~~---- 440 (532)
+.+++|+|||+.|++++.++ .|++||+.++. ..+..+
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 37899999999999987543 79999998876 233322
Q ss_pred --CCceeEEEEcCCCCEEEEEecC----CeEEEEecCCCCcceeEEeccc-cceEE--EEEccCCCCCcEEEE--EeCCC
Q 009569 441 --EEVITSFSLSKDNKYLLVNLIN----QEIHLWSIESDPKLVSRYKGHK-RARFV--IRSCFGGFEQAFIAS--GSEDS 509 (532)
Q Consensus 441 --~~~i~~~~~sp~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~-~~~~~--i~~~~~s~d~~~l~s--gs~dg 509 (532)
...+.+++|||||+++++.... ..|++||+.++ +....+..+. ..+.. ....| +|||+.|+. +..++
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~-spdg~~l~~~~~~~~~ 329 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG-VCTKKHEDESEAWLHRQNEEPVF-SKDGRKFFFIRAIPQG 329 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC-CEEEEEEEECSSCCCCCCCCCEE-CTTSCSEEEEEEECCS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC-cceEEEEeccCCEEeccCCCceE-cCCCCeEEEEEecccC
Confidence 5678999999999998776543 57999999887 5555544332 21110 12455 999997765 45667
Q ss_pred ------cEEEEe-CCCCC
Q 009569 510 ------QVNIFL-SFSPF 520 (532)
Q Consensus 510 ------~i~iw~-~~~~~ 520 (532)
.|++|| ..++.
T Consensus 330 ~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 330 GRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp SSSCEEEEEEECSSCCSS
T ss_pred CCcceeEEEEEeccCCCC
Confidence 588888 44444
No 148
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.2e-20 Score=192.19 Aligned_cols=201 Identities=10% Similarity=0.077 Sum_probs=154.2
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeecC----------CeeEE--EEEeecCCCCeEEEEeCCCCCEEE----Ee
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKED----------GQVSL--KHRLSGHRKPVFTVSWSPNDHQLL----TC 335 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~----------~~~~~--~~~~~~h~~~v~~l~~s~~~~~l~----s~ 335 (532)
...+..+++++++.++++++.|+ +++|+.... ..... ......+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34678999999999999999887 889876421 00000 001123567899999999999999 78
Q ss_pred eCCCcEEEEECCCC--------c---EEEEeeccCCceEEEEEeeC-CCeEEEEeCCCcEEEEECCCCeEEEeecCccCc
Q 009569 336 GQEEAIRRWDVNSG--------E---CLHVYEKTGVGLISCGWFLD-GGGIFAGMTDKSICLWDLDGRELESWKGQKTLR 403 (532)
Q Consensus 336 ~~dg~i~iwd~~~~--------~---~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 403 (532)
+.|+.|++||+.++ + .+..+.+|...|.+++|+|+ +.+|++++.||+|++||++++........+...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 89999999998654 2 24556678899999999997 789999999999999999887554333445558
Q ss_pred eEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeeeec-------CCceeEEEEcCCCCEEEEEe-cCC------eEEEE
Q 009569 404 ISDMAITDDGKRIISICREAAILLLDREANF-ERWIEE-------EEVITSFSLSKDNKYLLVNL-INQ------EIHLW 468 (532)
Q Consensus 404 v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~-------~~~i~~~~~sp~~~~l~~~~-~dg------~i~iw 468 (532)
|.+++|+|+|++|++++.||.|++||.+... ..+..+ ...+.+++|++++.++++.+ .+| .+++|
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~ 274 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMA 274 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEE
Confidence 9999999999999999999999999998332 222222 23799999999988876543 333 38999
Q ss_pred ecCCC
Q 009569 469 SIESD 473 (532)
Q Consensus 469 d~~~~ 473 (532)
++...
T Consensus 275 ~l~~~ 279 (434)
T 2oit_A 275 LLPKK 279 (434)
T ss_dssp ECCCT
T ss_pred EeccC
Confidence 99764
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=2.5e-20 Score=202.32 Aligned_cols=249 Identities=11% Similarity=0.081 Sum_probs=181.3
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeec-----CCeeEEEEEeecCCCC--------------eEE
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKE-----DGQVSLKHRLSGHRKP--------------VFT 322 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~-----~~~~~~~~~~~~h~~~--------------v~~ 322 (532)
......+..|...+.+++|||||++||++ .|+.|++|++.+ +.. ......+... +.+
T Consensus 110 ~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~---~~~~~~~~~~~~~g~~~~~ee~~~~~~ 185 (706)
T 2z3z_A 110 ARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA---IAVTIDGTETLVYGQAVHQREFGIEKG 185 (706)
T ss_dssp TTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC---EESCSCCBTTEEESSCCGGGCTTCCCS
T ss_pred CCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc---EEeccCCCCCeEcccchhhhhcCCCce
Confidence 33444555677889999999999999985 689999999986 532 2222223232 478
Q ss_pred EEeCCCCCEEEEee---------------------------------CCCcEEEEECCCCcEEEEee--ccCCceEEEEE
Q 009569 323 VSWSPNDHQLLTCG---------------------------------QEEAIRRWDVNSGECLHVYE--KTGVGLISCGW 367 (532)
Q Consensus 323 l~~s~~~~~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~~--~~~~~i~~~~~ 367 (532)
+.|||||++|++++ .+..|++||+.+++...... .+...+.+++|
T Consensus 186 ~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 265 (706)
T 2z3z_A 186 TFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSW 265 (706)
T ss_dssp EEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEE
Confidence 99999999999987 34679999999988655443 35677899999
Q ss_pred eeCCCeEEEEeCCC-----cEEEEECCCC-eEEEeecCc-cC---ceEEEEEee--CCCEEEEEECCCeEEEEECC-CCc
Q 009569 368 FLDGGGIFAGMTDK-----SICLWDLDGR-ELESWKGQK-TL---RISDMAITD--DGKRIISICREAAILLLDRE-ANF 434 (532)
Q Consensus 368 ~~~~~~l~~~~~dg-----~i~iwd~~~~-~~~~~~~~~-~~---~v~~~~~s~--~~~~l~~~~~dg~I~iwd~~-~~~ 434 (532)
+|||+.+++++.++ .|++||+.++ ......... .. .+.+++|+| ||+++++++.++.+++|++. ++.
T Consensus 266 spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~ 345 (706)
T 2z3z_A 266 SPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR 345 (706)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC
T ss_pred ECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC
Confidence 99999999987765 8999999887 554443221 11 246789999 99999999899988888775 332
Q ss_pred --eeeeecCCceeE-EEEcCCCCEEEEEecC-C----eEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEe
Q 009569 435 --ERWIEEEEVITS-FSLSKDNKYLLVNLIN-Q----EIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGS 506 (532)
Q Consensus 435 --~~~~~~~~~i~~-~~~sp~~~~l~~~~~d-g----~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs 506 (532)
..+..+...+.+ ++|+|+++.|++++.+ + .|+.||+.++ . ...+. +...+ ..+.| +|||++|+..+
T Consensus 346 ~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~-~-~~~l~-~~~~~--~~~~~-spdg~~l~~~~ 419 (706)
T 2z3z_A 346 LIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG-K-TKDLT-PESGM--HRTQL-SPDGSAIIDIF 419 (706)
T ss_dssp EEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC-C-CEESC-CSSSE--EEEEE-CTTSSEEEEEE
T ss_pred EEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC-C-ceecc-CCCce--EEEEE-CCCCCEEEEEe
Confidence 444556666776 7999999988766544 3 5777777665 3 33443 44443 34566 99999888765
Q ss_pred CC----CcEEEEeCCCCC
Q 009569 507 ED----SQVNIFLSFSPF 520 (532)
Q Consensus 507 ~d----g~i~iw~~~~~~ 520 (532)
.+ +.|++||+.++.
T Consensus 420 ~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 420 QSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ECSSCSCEEEEEESSSCE
T ss_pred cCCCCCcEEEEEECCCCe
Confidence 44 569999998876
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=5.3e-20 Score=199.69 Aligned_cols=243 Identities=8% Similarity=0.044 Sum_probs=181.2
Q ss_pred ccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCC----
Q 009569 273 DEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNS---- 348 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~---- 348 (532)
..|.+++|||| ..++.+ .++.|++||+.++ . ...+..+...+.+++|||||++|+++ .++.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~-~---~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR-K---VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT-E---EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCC-c---eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccccc
Confidence 56999999999 666555 3599999999865 2 23345567778899999999999985 689999999998
Q ss_pred -CcEEEEeeccCCc--------------eEEEEEeeCCCeEEEEe---------------------------------CC
Q 009569 349 -GECLHVYEKTGVG--------------LISCGWFLDGGGIFAGM---------------------------------TD 380 (532)
Q Consensus 349 -~~~~~~~~~~~~~--------------i~~~~~~~~~~~l~~~~---------------------------------~d 380 (532)
++.......+... +.++.|+|||++|++++ .+
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 7766544433332 47899999999999987 44
Q ss_pred CcEEEEECCCCeEEEeec--CccCceEEEEEeeCCCEEEEEECCC-----eEEEEECCCC-c-eeee--ecCC---ceeE
Q 009569 381 KSICLWDLDGRELESWKG--QKTLRISDMAITDDGKRIISICREA-----AILLLDREAN-F-ERWI--EEEE---VITS 446 (532)
Q Consensus 381 g~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg-----~I~iwd~~~~-~-~~~~--~~~~---~i~~ 446 (532)
..|++||+.++....... .+...+.+++|+|||+.|++++.++ .|++||+.++ . .... .+.. .+.+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 679999999887665542 2344789999999999999988775 8999999988 4 2222 1222 2467
Q ss_pred EEEcC--CCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeC-CC----cEEEEeCCCC
Q 009569 447 FSLSK--DNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSE-DS----QVNIFLSFSP 519 (532)
Q Consensus 447 ~~~sp--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~-dg----~i~iw~~~~~ 519 (532)
++|+| ||++++++..+|.++||++......+..+..+...+.. ...| +|+++.|+.++. ++ .|+.|+..++
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~-~~~~-spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTN-FAGF-DPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEE-EEEE-CTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEe-eeEE-cCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 89999 99999999999999999886332666777776554322 1355 999988765554 44 6888888776
Q ss_pred Cceee
Q 009569 520 FAKKI 524 (532)
Q Consensus 520 ~~~~~ 524 (532)
....+
T Consensus 393 ~~~~l 397 (706)
T 2z3z_A 393 KTKDL 397 (706)
T ss_dssp CCEES
T ss_pred Cceec
Confidence 64443
No 151
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=2.7e-19 Score=182.08 Aligned_cols=201 Identities=14% Similarity=0.157 Sum_probs=151.1
Q ss_pred cccccEEEEEEccCCCEEE----EEeCCCeEEEEEeecC--------CeeEEEEEeecCCCCeEEEEeCCC-CCEEEEee
Q 009569 270 AHSDEVWFLQFSHDGKYLA----SSSKDQSAIIWEVKED--------GQVSLKHRLSGHRKPVFTVSWSPN-DHQLLTCG 336 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~la----s~s~dg~i~iwd~~~~--------~~~~~~~~~~~h~~~v~~l~~s~~-~~~l~s~~ 336 (532)
.|...|++++|+|+|++|| +|+.|++|+|||+.+. ..+.....+.+|...|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 3677899999999999999 7889999999999754 222345667789999999999998 78999999
Q ss_pred CCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecC------ccCceEEEEEe
Q 009569 337 QEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQ------KTLRISDMAIT 410 (532)
Q Consensus 337 ~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~~v~~~~~s 410 (532)
.||+|++||++++..+.....|...|.+++|+|+|++|++|+.||.|++||+++........+ +...|.+++|+
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~ 249 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWI 249 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEe
Confidence 999999999999977777777888999999999999999999999999999985444433322 12279999999
Q ss_pred eCCCEEEEEE-CCC------eEEEEECCCCc----eeeee----------cCCceeEEEEcCCCCEEEEEec-CCeEEEE
Q 009569 411 DDGKRIISIC-REA------AILLLDREANF----ERWIE----------EEEVITSFSLSKDNKYLLVNLI-NQEIHLW 468 (532)
Q Consensus 411 ~~~~~l~~~~-~dg------~I~iwd~~~~~----~~~~~----------~~~~i~~~~~sp~~~~l~~~~~-dg~i~iw 468 (532)
+++.++++.+ .+| .+++||+++.. ..+.. ...+...+.+-++.+++++++. .+.|.++
T Consensus 250 ~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl 329 (434)
T 2oit_A 250 GTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSIL 329 (434)
T ss_dssp ETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEE
T ss_pred cCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEE
Confidence 9887775543 443 39999998652 11111 1222223344467777766654 3445555
Q ss_pred ec
Q 009569 469 SI 470 (532)
Q Consensus 469 d~ 470 (532)
..
T Consensus 330 ~~ 331 (434)
T 2oit_A 330 AR 331 (434)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=3.8e-19 Score=177.06 Aligned_cols=245 Identities=9% Similarity=0.078 Sum_probs=170.0
Q ss_pred ccccEEEEEEccCCCEEEEEeCCCeEEEEEee-cCCeeEEEEEeecCCCCeEEEEeCCCCCE--EEEee-----------
Q 009569 271 HSDEVWFLQFSHDGKYLASSSKDQSAIIWEVK-EDGQVSLKHRLSGHRKPVFTVSWSPNDHQ--LLTCG----------- 336 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~-~~~~~~~~~~~~~h~~~v~~l~~s~~~~~--l~s~~----------- 336 (532)
+...+..++|+|+|++|++++.+ .|.+|++. ++ ..........+ +.+.+++|+|||++ +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g-~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT-EIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT-EEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC-CEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 34467899999999999998888 99999997 44 33222222222 23556899999994 55553
Q ss_pred --CCCcEEEEECC-CCcEEEEee----ccCCceEEEEEeeCCCeEEEEeC-CCcEEEEECC-CCeEEE---eec-CccCc
Q 009569 337 --QEEAIRRWDVN-SGECLHVYE----KTGVGLISCGWFLDGGGIFAGMT-DKSICLWDLD-GRELES---WKG-QKTLR 403 (532)
Q Consensus 337 --~dg~i~iwd~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~-~~~~~~---~~~-~~~~~ 403 (532)
.++.+.+|++. +++....+. .+...+.+++|+|+|++++++.. ++.|++||++ ++.+.. ... .+...
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~ 194 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCC
Confidence 68999999997 466554443 24567899999999998887764 6799999997 555432 221 12346
Q ss_pred eEEEEEeeCCCEEEEEEC-CCeEEEEECC--CCcee-----ee--e-----cCC------ceeEEE-EcCCCCEEEEEec
Q 009569 404 ISDMAITDDGKRIISICR-EAAILLLDRE--ANFER-----WI--E-----EEE------VITSFS-LSKDNKYLLVNLI 461 (532)
Q Consensus 404 v~~~~~s~~~~~l~~~~~-dg~I~iwd~~--~~~~~-----~~--~-----~~~------~i~~~~-~sp~~~~l~~~~~ 461 (532)
+..++|+|||+++++++. ++.|.+|++. ++... .. . +.. .+..++ |+|||++|++++.
T Consensus 195 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 899999999999888775 6899999875 33321 11 1 111 478999 9999999887764
Q ss_pred CC------eEEEEecC-CCCccee---EEeccccceEEEEEccCCC---CCcEEEEEeCC-CcEEEEeCCCCCce
Q 009569 462 NQ------EIHLWSIE-SDPKLVS---RYKGHKRARFVIRSCFGGF---EQAFIASGSED-SQVNIFLSFSPFAK 522 (532)
Q Consensus 462 dg------~i~iwd~~-~~~~~~~---~~~~~~~~~~~i~~~~~s~---d~~~l~sgs~d-g~i~iw~~~~~~~~ 522 (532)
+. .|.+|++. ++ +... ....+.... ..++| +| ||++|++++.+ +.|.+|+++...+.
T Consensus 275 ~~~~~~~~~i~v~~~~~~g-~~~~~~~~~~~~~~~~--~~~a~-sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l~ 345 (365)
T 1jof_A 275 ANKFELQGYIAGFKLRDCG-SIEKQLFLSPTPTSGG--HSNAV-SPCPWSDEWMAITDDQEGWLEIYRWKDEFLH 345 (365)
T ss_dssp ESSTTSCCEEEEEEECTTS-CEEEEEEEEECSSCCT--TCCCE-EECTTCTTEEEEECSSSCEEEEEEEETTEEE
T ss_pred CCCCCCCCeEEEEEECCCC-CEEEeeeeeecCCCCc--cccee-cCCCcCCCEEEEEEcCCCeEEEEEEchhhCc
Confidence 32 89999996 44 4332 122222211 12344 78 89999998874 89999999876443
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=1e-19 Score=205.84 Aligned_cols=246 Identities=13% Similarity=0.097 Sum_probs=195.0
Q ss_pred eeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEE
Q 009569 264 TLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRR 343 (532)
Q Consensus 264 ~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~i 343 (532)
....+.+|...+.++.|+++ .++++++.|+.+.||.+...+. ....+..|. .+..++|+|||+.|+++ .++.|.+
T Consensus 195 ~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~--~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~ 269 (1045)
T 1k32_A 195 AFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGK--DLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYI 269 (1045)
T ss_dssp EEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSC--SCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEE
T ss_pred CeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCC--cceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEE
Confidence 34455889999999999998 6777888899999999874322 223445554 46677999999999887 4899999
Q ss_pred EECCCCcEEEEeec-----------cCCceEEEEEe-eCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEee
Q 009569 344 WDVNSGECLHVYEK-----------TGVGLISCGWF-LDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITD 411 (532)
Q Consensus 344 wd~~~~~~~~~~~~-----------~~~~i~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~ 411 (532)
||+.... +..+.. +...+.+++|+ |+|+.+++++ ++.|++|++.++.......+....+..++|+
T Consensus 270 ~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 270 FNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD- 346 (1045)
T ss_dssp ECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-
T ss_pred ecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-
Confidence 9995444 334443 23468899999 9999999888 7899999998877666544433278999999
Q ss_pred CCCEEEEEECCCeEE-EEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEE
Q 009569 412 DGKRIISICREAAIL-LLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFV 489 (532)
Q Consensus 412 ~~~~l~~~~~dg~I~-iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 489 (532)
||+.+++++.++.+. +||..++. ..+..+...+..++|+|||++|++++.++.|++||+.++ +....+.+|...+..
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg-~~~~~~~~~~~~v~~ 425 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG-KPTVIERSREAMITD 425 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEECSSSCCCC
T ss_pred CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC-ceEEeccCCCCCccc
Confidence 999999999888899 99998876 444467788999999999999999999999999999987 666666677665433
Q ss_pred EEEccCCCCCcEEEEEeCCC----------cEEEEeCCCCCc
Q 009569 490 IRSCFGGFEQAFIASGSEDS----------QVNIFLSFSPFA 521 (532)
Q Consensus 490 i~~~~~s~d~~~l~sgs~dg----------~i~iw~~~~~~~ 521 (532)
+.| +|||++|++++.++ .|++||+.++..
T Consensus 426 --~~~-SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 426 --FTI-SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp --EEE-CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred --eEE-CCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 456 99999999887754 899999998763
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=9.3e-20 Score=206.22 Aligned_cols=259 Identities=15% Similarity=0.163 Sum_probs=200.4
Q ss_pred cccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeec---
Q 009569 239 FHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSG--- 315 (532)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~--- 315 (532)
|....++...+|.-.. .......+..|. .+.+.+|+|||++|+++ .++.|++|+.. ...+ ..+..
T Consensus 218 ~~~~~dg~~~l~~~~~------~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~-~~~l---~~l~~~~~ 285 (1045)
T 1k32_A 218 FITDIDGFGQIYSTDL------DGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPD-TEKI---EKIEIGDL 285 (1045)
T ss_dssp EEECTTSSCEEEEEET------TSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTT-TCCE---EECCCCCC
T ss_pred EEEeccCceEEEEEeC------CCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCC-ceEe---eeeccCcc
Confidence 3444445555664221 122344555555 46678999999999988 48999999984 2222 24443
Q ss_pred --------CCCCeEEEEeC-CCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCC-ceEEEEEeeCCCeEEEEeCCCcEE-
Q 009569 316 --------HRKPVFTVSWS-PNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGV-GLISCGWFLDGGGIFAGMTDKSIC- 384 (532)
Q Consensus 316 --------h~~~v~~l~~s-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~- 384 (532)
|...+.+++|+ |||++|++++ ++.|.+|++.++.... +..+.. .+..++|+ +|+.+++++.++.+.
T Consensus 286 ~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~ 362 (1045)
T 1k32_A 286 ESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLG 362 (1045)
T ss_dssp CBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEE
T ss_pred cccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEE
Confidence 34468999999 9999999888 7899999998887554 555666 89999999 999999998888899
Q ss_pred EEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeee-ecCCceeEEEEcCCCCEEEEEecC
Q 009569 385 LWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWI-EEEEVITSFSLSKDNKYLLVNLIN 462 (532)
Q Consensus 385 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~-~~~~~i~~~~~sp~~~~l~~~~~d 462 (532)
+||+.++....+. .+...+..++|+|||++|++++.++.|++||+.++. .... .+...+.+++|||||++|++++.+
T Consensus 363 ~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 363 IYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp EEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred EEECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecC
Confidence 9999888776666 454589999999999999999999999999999887 3333 678889999999999999988765
Q ss_pred C----------eEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 463 Q----------EIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 463 g----------~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
+ .|++||+.++ + +..+..|.... ....| +|||++|++++.++...+|+...
T Consensus 442 ~~~~~~~~~~~~i~l~d~~~g-~-~~~l~~~~~~~--~~~~~-spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 442 KHGETDGYVMQAIHVYDMEGR-K-IFAATTENSHD--YAPAF-DADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp CSSTTCSCCEEEEEEEETTTT-E-EEECSCSSSBE--EEEEE-CTTSCEEEEEESCCCCCEECSSS
T ss_pred ccccccCCCCCeEEEEECCCC-c-EEEeeCCCccc--CCceE-cCCCCEEEEEecccCCcCcchhc
Confidence 4 8999999887 4 66677776553 33556 99999999999988888887653
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=3.4e-19 Score=178.54 Aligned_cols=259 Identities=13% Similarity=0.024 Sum_probs=180.5
Q ss_pred cceeEEcccccccEEE-----EEEccCCCEEEEEeC-CCe--EEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEE
Q 009569 262 SQTLQILEAHSDEVWF-----LQFSHDGKYLASSSK-DQS--AIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLL 333 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~-----v~~s~~g~~las~s~-dg~--i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~ 333 (532)
...+..+..|...+.. .+|||||++|+.++. ++. |.+||+.++ .......++...+..+.|+||++.|+
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g---~~~~lt~~~~~~~~~~~~spdg~~l~ 96 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ---VATQLTEGRGDNTFGGFLSPDDDALF 96 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTC---EEEECCCSSCBCSSSCEECTTSSEEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCC---ceEEeeeCCCCCccceEEcCCCCEEE
Confidence 4566677777766666 889999999998887 674 777787754 23344445555555678999999999
Q ss_pred EeeCCCcEEEEECCCCcEEEEeeccCCceEEEE--EeeCCCeEEEE----------------------eCCCcEEEEECC
Q 009569 334 TCGQEEAIRRWDVNSGECLHVYEKTGVGLISCG--WFLDGGGIFAG----------------------MTDKSICLWDLD 389 (532)
Q Consensus 334 s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~----------------------~~dg~i~iwd~~ 389 (532)
.++.++.|++||+.+++....+..+...+.... ++|+++.++.. ..+..|++||+.
T Consensus 97 ~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 97 YVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp EEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred EEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 999999999999999988777776666554444 47899888742 234689999999
Q ss_pred CCeEEEeecCccCceEEEEEee-CCCEEEEEECC------CeEEEEECCCCc-eeeeecC--CceeEEEEcCCCCEEEEE
Q 009569 390 GRELESWKGQKTLRISDMAITD-DGKRIISICRE------AAILLLDREANF-ERWIEEE--EVITSFSLSKDNKYLLVN 459 (532)
Q Consensus 390 ~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d------g~I~iwd~~~~~-~~~~~~~--~~i~~~~~sp~~~~l~~~ 459 (532)
+++...+..... .+..++|+| ||+.|+.+..+ ..|.++|..+.. ..+..+. ..+..++|+|||+.|+..
T Consensus 177 ~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 177 TGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp TCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred CCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEE
Confidence 887766655443 789999999 99999887753 378899987766 3333333 357889999999977654
Q ss_pred ec-CC----eEEEEecCCCCc-ceeEEeccccceEEE-EEccCCCCCcEEEEE---------eCCCcEEEEeCCCCCcee
Q 009569 460 LI-NQ----EIHLWSIESDPK-LVSRYKGHKRARFVI-RSCFGGFEQAFIASG---------SEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 460 ~~-dg----~i~iwd~~~~~~-~~~~~~~~~~~~~~i-~~~~~s~d~~~l~sg---------s~dg~i~iw~~~~~~~~~ 523 (532)
+. ++ .|++||+.++.. .+..+.++....... ...| +|||+.|+.. ..+..|++||+.++....
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~-spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 334 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLM-VGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHR 334 (388)
T ss_dssp EEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEE-EEEECCC------------CCCCEEEEEETTTTEEEE
T ss_pred ecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeE-ccCCCcceeEeeeccccccCCCCEEEEEeccCCceEE
Confidence 43 22 399999988721 222333311100000 0134 8999887754 456789999999987655
Q ss_pred ee
Q 009569 524 IK 525 (532)
Q Consensus 524 ~~ 525 (532)
+.
T Consensus 335 l~ 336 (388)
T 3pe7_A 335 VA 336 (388)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=3.1e-19 Score=189.23 Aligned_cols=241 Identities=13% Similarity=0.086 Sum_probs=173.8
Q ss_pred CCCcceeEEccccc-ccEEEEEEccCCCEEEEEeC---CCeEEEEEeec--CCeeEEEEEeecCCCCeEEEEeCCCCCE-
Q 009569 259 RIPSQTLQILEAHS-DEVWFLQFSHDGKYLASSSK---DQSAIIWEVKE--DGQVSLKHRLSGHRKPVFTVSWSPNDHQ- 331 (532)
Q Consensus 259 ~~~~~~~~~l~~h~-~~V~~v~~s~~g~~las~s~---dg~i~iwd~~~--~~~~~~~~~~~~h~~~v~~l~~s~~~~~- 331 (532)
.........+..|. ..|.+++|||| +++++++. +....+|.+.. .+... .+..+ ..+...+|+|+++.
T Consensus 50 ~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~---~l~~~-~~~~~~~~s~dg~~~ 124 (582)
T 3o4h_A 50 LYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ---RLEAV-KPMRILSGVDTGEAV 124 (582)
T ss_dssp EEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE---ECTTS-CSBEEEEEEECSSCE
T ss_pred EEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc---cccCC-CCceeeeeCCCCCeE
Confidence 33344455555565 68999999999 77777765 56677877764 33322 33222 23456788888853
Q ss_pred EEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCC----CcEEEEECCCCeEEEeecCccCceEEE
Q 009569 332 LLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTD----KSICLWDLDGRELESWKGQKTLRISDM 407 (532)
Q Consensus 332 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~v~~~ 407 (532)
+++.+.++.+.+||+.+++.......+. .+++|+|||+++++++.+ +.|++||+.++....+..+ ...+..+
T Consensus 125 ~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~-~~~~~~~ 200 (582)
T 3o4h_A 125 VFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG-EGSFSSA 200 (582)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS-SCEEEEE
T ss_pred EEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC-CCccccc
Confidence 3333444555699999988766554433 789999999999988776 7899999988877766544 3478999
Q ss_pred EEeeCCCEEEEEECCC--eEEEEECCCCc-eeeeecCCceeEEE--------EcCCCCEEEEEecCCeEEEEecCCCCcc
Q 009569 408 AITDDGKRIISICREA--AILLLDREANF-ERWIEEEEVITSFS--------LSKDNKYLLVNLINQEIHLWSIESDPKL 476 (532)
Q Consensus 408 ~~s~~~~~l~~~~~dg--~I~iwd~~~~~-~~~~~~~~~i~~~~--------~sp~~~~l~~~~~dg~i~iwd~~~~~~~ 476 (532)
+|+|||+.|+++..++ .|++||+.++. ..+..+...+..++ |+|||.++++++.++.+++|++ + +.
T Consensus 201 ~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g-~~ 277 (582)
T 3o4h_A 201 SISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--G-ER 277 (582)
T ss_dssp EECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--T-EE
T ss_pred eECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--C-Ce
Confidence 9999999999888888 89999999877 43334555666666 9999999999999999999999 4 44
Q ss_pred eeEEeccccceEEEEEccCCCCCcEEEEEeCCCc---EEEEeCCC
Q 009569 477 VSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQ---VNIFLSFS 518 (532)
Q Consensus 477 ~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~---i~iw~~~~ 518 (532)
... +... +..+.| + +++++++++.+.. +++|+..+
T Consensus 278 ~~~---~~~~--v~~~~~-s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 278 VEA---PQGN--HGRVVL-W-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp ECC---CSSE--EEEEEE-E-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred ecc---CCCc--eEEEEe-c-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 432 2222 234566 7 8999999888754 78887765
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=1.4e-19 Score=196.73 Aligned_cols=238 Identities=13% Similarity=0.102 Sum_probs=167.2
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCC---CeEEEEeCCCCCEEEEeeC---------CCcEEEE
Q 009569 277 FLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRK---PVFTVSWSPNDHQLLTCGQ---------EEAIRRW 344 (532)
Q Consensus 277 ~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~---~v~~l~~s~~~~~l~s~~~---------dg~i~iw 344 (532)
+++|+|+|++++++ .|++|++||+.++. ....+.+|.. .+.+++|||||++|++++. ++.|++|
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQ---SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCC---EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCc---EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 67899999766655 69999999998764 2333444433 4889999999999999876 6899999
Q ss_pred ECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeec-CccCce-----------------EE
Q 009569 345 DVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKG-QKTLRI-----------------SD 406 (532)
Q Consensus 345 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v-----------------~~ 406 (532)
|+.+++.+.... ....+..++|+|||+.|+.+. ++.|++||+.++....+.. .+...| .+
T Consensus 96 d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 96 DLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp ETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred ECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 999987631111 134588899999999999886 7899999998766554432 211112 48
Q ss_pred EEEeeCCCEEEEEECCC----------------------------------eEEEEECCCCce----ee------eecCC
Q 009569 407 MAITDDGKRIISICREA----------------------------------AILLLDREANFE----RW------IEEEE 442 (532)
Q Consensus 407 ~~~s~~~~~l~~~~~dg----------------------------------~I~iwd~~~~~~----~~------~~~~~ 442 (532)
++|+|||+.|++++.|. .|++||+.++.. .+ ..+..
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence 99999999999987552 789999988762 11 23667
Q ss_pred ceeEEEEcCCCCEEEEEecCC----eEEEEe----cCCCCcceeEE----eccccceE---EEEEccCCCCCcEEEE--E
Q 009569 443 VITSFSLSKDNKYLLVNLINQ----EIHLWS----IESDPKLVSRY----KGHKRARF---VIRSCFGGFEQAFIAS--G 505 (532)
Q Consensus 443 ~i~~~~~sp~~~~l~~~~~dg----~i~iwd----~~~~~~~~~~~----~~~~~~~~---~i~~~~~s~d~~~l~s--g 505 (532)
.+.+++||||++++++....+ .|.+|| +.++ +....+ .+|...+. .....| +|||+.|+. .
T Consensus 254 ~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~-spdg~~l~~~~~ 331 (719)
T 1z68_A 254 YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW-DCPKTQEHIEESRTGWAGGFFVSTPVF-SYDAISYYKIFS 331 (719)
T ss_dssp EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE-ECCGGGEEEEECSSSCSSSSSCCCCEE-CTTSSCEEEEEE
T ss_pred eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC-ceEEEEecccccCCceEccccCCccEE-CCCCCeEEEEEE
Confidence 789999999988777754332 488999 7665 444333 34444322 002345 999986554 4
Q ss_pred eCCC--cEEEEeCCCCCce
Q 009569 506 SEDS--QVNIFLSFSPFAK 522 (532)
Q Consensus 506 s~dg--~i~iw~~~~~~~~ 522 (532)
..+| .|++|++.++...
T Consensus 332 ~~~g~~~l~~~~~~~~~~~ 350 (719)
T 1z68_A 332 DKDGYKHIHYIKDTVENAI 350 (719)
T ss_dssp CTTSCEEEEEESSCSTTCE
T ss_pred ccCCceEEEEEECCCCceE
Confidence 4555 5788888776543
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.81 E-value=6.7e-19 Score=191.91 Aligned_cols=243 Identities=10% Similarity=0.050 Sum_probs=173.8
Q ss_pred cEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCC-----eEEEEeCCCCCEEEEeeCC---------C
Q 009569 274 EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKP-----VFTVSWSPNDHQLLTCGQE---------E 339 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~-----v~~l~~s~~~~~l~s~~~d---------g 339 (532)
...+++|+|||++++++ |++|++||+.++.. ...+.+|... ...+.|||||++|+.++.+ +
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNS---SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCE---EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCce---EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 35578999999999986 99999999987743 3445666532 2448899999999998876 5
Q ss_pred cEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCc-cCce--------------
Q 009569 340 AIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQK-TLRI-------------- 404 (532)
Q Consensus 340 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v-------------- 404 (532)
.+.+||+.+++.. .+..+...+...+|+|||+.|+.+. ++.|++||+.++....+.... ...+
T Consensus 93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 6779999998864 4556677899999999999998884 689999999876655543221 1112
Q ss_pred ---EEEEEeeCCCEEEEEECCC------------------------------------eEEEEECCC---C---c-eeee
Q 009569 405 ---SDMAITDDGKRIISICREA------------------------------------AILLLDREA---N---F-ERWI 438 (532)
Q Consensus 405 ---~~~~~s~~~~~l~~~~~dg------------------------------------~I~iwd~~~---~---~-~~~~ 438 (532)
..+.|||||+.|+.++.|. .|++||+.+ + . ..+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 3589999999999875321 588899988 6 3 2222
Q ss_pred ------ecCCceeEEEEcCCCCEEEEEecC----CeEEEEecCCCCc------ceeEE--eccccceE---EEEEccCCC
Q 009569 439 ------EEEEVITSFSLSKDNKYLLVNLIN----QEIHLWSIESDPK------LVSRY--KGHKRARF---VIRSCFGGF 497 (532)
Q Consensus 439 ------~~~~~i~~~~~sp~~~~l~~~~~d----g~i~iwd~~~~~~------~~~~~--~~~~~~~~---~i~~~~~s~ 497 (532)
.+...+..++|+|||+.++..... ..|++||+.++ + .+..+ .++...+. .....| +|
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg-~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f-sp 328 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDES-SGRWNCLVARQHIEMSTTGWVGRFRPSEPHF-TL 328 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETT-TTEEEECGGGCEEEECSSSCSSSSSCCCCEE-CT
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCC-ccccceeEEEEeeeccCCceEccCcCCCceE-cC
Confidence 266679999999999977765433 36999999887 3 12222 33433221 112445 99
Q ss_pred CCcEEE-EEeC-C--CcEEEEeCCCCCceeee
Q 009569 498 EQAFIA-SGSE-D--SQVNIFLSFSPFAKKIK 525 (532)
Q Consensus 498 d~~~l~-sgs~-d--g~i~iw~~~~~~~~~~~ 525 (532)
||+.|+ ..++ + ..|++|+..++...++.
T Consensus 329 DG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT 360 (740)
T 4a5s_A 329 DGNSFYKIISNEEGYRHICYFQIDKKDCTFIT 360 (740)
T ss_dssp TSSEEEEEEECTTSCEEEEEEETTCSSCEESC
T ss_pred CCCEEEEEEEcCCCceEEEEEECCCCceEecc
Confidence 999877 6654 3 45899999887655543
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.81 E-value=1.2e-18 Score=170.55 Aligned_cols=226 Identities=10% Similarity=0.081 Sum_probs=163.7
Q ss_pred CEEEEEeCCCeEEEEEeecCCeeEEEEEeecCC-C-CeEEEEeCCCCCEEE-EeeCCCcEEEEECCCCcEEEEeeccC--
Q 009569 285 KYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHR-K-PVFTVSWSPNDHQLL-TCGQEEAIRRWDVNSGECLHVYEKTG-- 359 (532)
Q Consensus 285 ~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~-~-~v~~l~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~-- 359 (532)
+++++++.++.|.+||..++ +....+.... . .+..++|+|++++++ ++..++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM---AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT---EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred cEEEEcCCCCeEEEEECCCC---cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc
Confidence 47899999999999999865 3344443222 1 478899999998665 55567899999999999887765321
Q ss_pred ---CceEEEEEeeCCCeEEEEe------------CCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCe
Q 009569 360 ---VGLISCGWFLDGGGIFAGM------------TDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAA 424 (532)
Q Consensus 360 ---~~i~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 424 (532)
..+.+++|+|++++++++. .++.|.+||+.+.......... ..+.+++|+|++++++++ ++.
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~--~~~ 155 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP-RQITMLAWARDGSKLYGL--GRD 155 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC-SSCCCEEECTTSSCEEEE--SSS
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC-CCcceeEECCCCCEEEEe--CCe
Confidence 2567899999999998886 5799999999887665444333 368889999999988887 689
Q ss_pred EEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCC------------------------eEEEEecCCCCcce-e
Q 009569 425 ILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQ------------------------EIHLWSIESDPKLV-S 478 (532)
Q Consensus 425 I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg------------------------~i~iwd~~~~~~~~-~ 478 (532)
|++||+.+++ ............+.|+|+++++++.+..+ .|.+||+.++ +.. .
T Consensus 156 i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-~~~~~ 234 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG-EMAMR 234 (337)
T ss_dssp EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC-CEEEE
T ss_pred EEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC-CceEe
Confidence 9999999887 22222222112347899998776554332 4689999887 443 2
Q ss_pred EEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 479 RYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 479 ~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
.+..+... ...+.| +|++++++++ ++.|++||+.+++..
T Consensus 235 ~~~~~~~~--~~~~~~-s~dg~~l~~~--~~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 235 EVRIMDVF--YFSTAV-NPAKTRAFGA--YNVLESFDLEKNASI 273 (337)
T ss_dssp EEEECSSC--EEEEEE-CTTSSEEEEE--ESEEEEEETTTTEEE
T ss_pred ecCCCCCc--eeeEEE-CCCCCEEEEe--CCeEEEEECCCCcCc
Confidence 23333333 234566 9999999988 799999999987543
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=6.8e-17 Score=154.77 Aligned_cols=240 Identities=11% Similarity=0.148 Sum_probs=179.2
Q ss_pred cccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEee------cCCCCeEEEEe-CCCCCEEEEeeC-CCcE
Q 009569 270 AHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS------GHRKPVFTVSW-SPNDHQLLTCGQ-EEAI 341 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~------~h~~~v~~l~~-s~~~~~l~s~~~-dg~i 341 (532)
+|-..+.+++++++|+++++.+.++.|.+||.. +. ....+. +|...+..+++ .+++.++++... ++.|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~---~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GR---FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SC---EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-Cc---EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 456778999999999988888889999999976 32 223332 24457889999 567766666543 8899
Q ss_pred EEEECCCCcEEEEeec-cCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeec-CccCceEEEEEeeCCCEEEEE
Q 009569 342 RRWDVNSGECLHVYEK-TGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKG-QKTLRISDMAITDDGKRIISI 419 (532)
Q Consensus 342 ~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~ 419 (532)
.+|| .+++.+..+.. +...+.++++.|+++.+++...++.|.+||..+.....+.. .....+.+++++|+|+++++.
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 9999 56777766643 34568899999999888877788999999987766655532 223368999999999977777
Q ss_pred ECCCeEEEEECCCCceeeeec---CCceeEEEEcCCCCEEEEEecCC-eEEEEecCCCCcceeEEeccccceEEEEEccC
Q 009569 420 CREAAILLLDREANFERWIEE---EEVITSFSLSKDNKYLLVNLINQ-EIHLWSIESDPKLVSRYKGHKRARFVIRSCFG 495 (532)
Q Consensus 420 ~~dg~I~iwd~~~~~~~~~~~---~~~i~~~~~sp~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~ 495 (532)
..++.|++||........... ...+..++++|+|+++++...++ .|.+||.. + +.+..+..+........+++
T Consensus 182 ~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g-~~~~~~~~~~~~~~~~~i~~- 258 (286)
T 1q7f_A 182 NRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-G-QLISALESKVKHAQCFDVAL- 258 (286)
T ss_dssp GGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-S-CEEEEEEESSCCSCEEEEEE-
T ss_pred CCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-C-CEEEEEcccCCCCcceeEEE-
Confidence 789999999986554332322 25688999999999888887776 99999964 3 56677765543322334556
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCC
Q 009569 496 GFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 496 s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
+|+|+++++ +.|++|++|++..
T Consensus 259 ~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 259 MDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp ETTTEEEEE-ETTTEEEEEECSC
T ss_pred CCCCcEEEE-CCCCeEEEEEccc
Confidence 889987777 6799999999865
No 161
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.79 E-value=5.7e-17 Score=159.84 Aligned_cols=208 Identities=14% Similarity=0.217 Sum_probs=149.8
Q ss_pred eeEEcccccccEEEEEEccCCCEEEEEe-CCCeEEEEEeecCCeeEEEEEeecC---------CCCeEEEEeCCCCCEEE
Q 009569 264 TLQILEAHSDEVWFLQFSHDGKYLASSS-KDQSAIIWEVKEDGQVSLKHRLSGH---------RKPVFTVSWSPNDHQLL 333 (532)
Q Consensus 264 ~~~~l~~h~~~V~~v~~s~~g~~las~s-~dg~i~iwd~~~~~~~~~~~~~~~h---------~~~v~~l~~s~~~~~l~ 333 (532)
.+..+..|...+..++|+|+|++|++++ .++.|.+|++...+.......+... ...+.+++|+|+|+.++
T Consensus 77 ~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v 156 (347)
T 3hfq_A 77 KLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAV 156 (347)
T ss_dssp EEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEE
T ss_pred EeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEE
Confidence 3444556778899999999999988887 7899999999755555555444321 23488999999999666
Q ss_pred EeeCCCcEEEEECC-CCcEEE--Eeec-cCCceEEEEEeeCCCeEEE-EeCCCcEEEEECCC--CeEEEe---ecCcc--
Q 009569 334 TCGQEEAIRRWDVN-SGECLH--VYEK-TGVGLISCGWFLDGGGIFA-GMTDKSICLWDLDG--RELESW---KGQKT-- 401 (532)
Q Consensus 334 s~~~dg~i~iwd~~-~~~~~~--~~~~-~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~--~~~~~~---~~~~~-- 401 (532)
+...++.|.+|++. +++... .+.. ....+..++|+|+|+++++ +..++.|.+|+++. +.+... .....
T Consensus 157 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 157 IDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADY 236 (347)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTC
T ss_pred EeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCC
Confidence 66668899999998 554332 2222 2346788999999996666 45688999999863 443222 11111
Q ss_pred ---CceEEEEEeeCCCEEE-EEECCCeEEEEECCCC-c----eeeeecCCceeEEEEcCCCCEEEEEecC-CeEEEEecC
Q 009569 402 ---LRISDMAITDDGKRII-SICREAAILLLDREAN-F----ERWIEEEEVITSFSLSKDNKYLLVNLIN-QEIHLWSIE 471 (532)
Q Consensus 402 ---~~v~~~~~s~~~~~l~-~~~~dg~I~iwd~~~~-~----~~~~~~~~~i~~~~~sp~~~~l~~~~~d-g~i~iwd~~ 471 (532)
..+..++|+|||++++ +...++.|.+||+... . .....+...+..++|+|||++|++++.+ +.|.+|++.
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 2588999999999875 4556899999998732 2 2222335568899999999998888764 899999553
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.79 E-value=1.6e-17 Score=163.45 Aligned_cols=228 Identities=7% Similarity=0.006 Sum_probs=164.8
Q ss_pred cccCCCCCceeeccCCccCCCCCcceeEEccccc-ccEEEEEEccCCCEEE-EEeCCCeEEEEEeecCCeeEEEEEeecC
Q 009569 239 FHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHS-DEVWFLQFSHDGKYLA-SSSKDQSAIIWEVKEDGQVSLKHRLSGH 316 (532)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~-~~V~~v~~s~~g~~la-s~s~dg~i~iwd~~~~~~~~~~~~~~~h 316 (532)
+....++.+.+|+..+ .+.+..+..+. ..+..++|+|+|++++ ++..++.|.+||+.++. ....+..+
T Consensus 15 v~~~~~~~v~~~d~~~-------~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~---~~~~~~~~ 84 (349)
T 1jmx_B 15 IVTNYPNNLHVVDVAS-------DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK---NTFHANLS 84 (349)
T ss_dssp EEEETTTEEEEEETTT-------TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEEESC
T ss_pred EEeCCCCeEEEEECCC-------CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc---EEEEEEcc
Confidence 3455566777776543 34455555333 2578999999998665 55678999999998653 33333322
Q ss_pred C------CCeEEEEeCCCCCEEEEeeCC------------CcEEEEECCCCcE---EEEeeccCCceEEEEEeeCCCeEE
Q 009569 317 R------KPVFTVSWSPNDHQLLTCGQE------------EAIRRWDVNSGEC---LHVYEKTGVGLISCGWFLDGGGIF 375 (532)
Q Consensus 317 ~------~~v~~l~~s~~~~~l~s~~~d------------g~i~iwd~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~ 375 (532)
. ..+..++|+|+|++|++++.+ +.|.+||+.+++. +..+.. ...+.+++|+|+++ ++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EE
Confidence 2 237789999999999998865 8999999988543 334433 34588899999999 66
Q ss_pred EEeCCCcEEEEECCCCeEEEeecCcc------------------------------------------------------
Q 009569 376 AGMTDKSICLWDLDGRELESWKGQKT------------------------------------------------------ 401 (532)
Q Consensus 376 ~~~~dg~i~iwd~~~~~~~~~~~~~~------------------------------------------------------ 401 (532)
+++. .|++||+.+++.........
T Consensus 163 ~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 240 (349)
T 1jmx_B 163 VAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 240 (349)
T ss_dssp EESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred EccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec
Confidence 6543 49999998765443322110
Q ss_pred --------------CceEEEEEee-CCCEEEEEECCCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCCeE
Q 009569 402 --------------LRISDMAITD-DGKRIISICREAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQEI 465 (532)
Q Consensus 402 --------------~~v~~~~~s~-~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i 465 (532)
..+..++|+| ++++++++ ++.|.+||+.+++ .........+.+++|+|++++|++++.++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v 318 (349)
T 1jmx_B 241 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDL 318 (349)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEE
T ss_pred cCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeE
Confidence 1345677889 99998888 8899999999887 3444455668899999999999998889999
Q ss_pred EEEecCCCCcceeEEecc
Q 009569 466 HLWSIESDPKLVSRYKGH 483 (532)
Q Consensus 466 ~iwd~~~~~~~~~~~~~~ 483 (532)
.+||+.+. +.+..+...
T Consensus 319 ~v~d~~~~-~~~~~~~~~ 335 (349)
T 1jmx_B 319 AVFNPDTL-EKVKNIKLP 335 (349)
T ss_dssp EEEETTTT-EEEEEEECS
T ss_pred EEEecccc-ceeeeeecC
Confidence 99999887 777777654
No 163
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.77 E-value=9.5e-18 Score=168.22 Aligned_cols=250 Identities=12% Similarity=0.032 Sum_probs=169.8
Q ss_pred ceeEEcccccc-----cEEEEEEccCCCEEEEEeCC---CeEEEEEeecCCeeEEEEEeecCCCC-eEEEEeCCCCCEEE
Q 009569 263 QTLQILEAHSD-----EVWFLQFSHDGKYLASSSKD---QSAIIWEVKEDGQVSLKHRLSGHRKP-VFTVSWSPNDHQLL 333 (532)
Q Consensus 263 ~~~~~l~~h~~-----~V~~v~~s~~g~~las~s~d---g~i~iwd~~~~~~~~~~~~~~~h~~~-v~~l~~s~~~~~l~ 333 (532)
..+..+..+.. .+.+++|||||++|+.++.. ..|.+|++.++. . ..+..+... ...+.|+|||++|+
T Consensus 21 ~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~---~-~~l~~~~~~~~~~~~~spdg~~l~ 96 (396)
T 3c5m_A 21 VKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ---A-VQLTEGKGDNTFGGFISTDERAFF 96 (396)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE---E-EECCCSSCBCTTTCEECTTSSEEE
T ss_pred cceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc---E-EEeecCCCCccccceECCCCCEEE
Confidence 44455554433 37788999999998876543 468888887542 2 233333333 33478999999999
Q ss_pred EeeCCCcEEEEECCCCcEEEEeeccCCceEE-------------------EEEeeCCCeEEEE-----eCCCcEEEEECC
Q 009569 334 TCGQEEAIRRWDVNSGECLHVYEKTGVGLIS-------------------CGWFLDGGGIFAG-----MTDKSICLWDLD 389 (532)
Q Consensus 334 s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~-----~~dg~i~iwd~~ 389 (532)
.++.++.|++||+.+++.......+...... +.|+|+++.++.+ ..+..|++||+.
T Consensus 97 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~ 176 (396)
T 3c5m_A 97 YVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIE 176 (396)
T ss_dssp EEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETT
T ss_pred EEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECC
Confidence 9999999999999998876666544432222 3456677666544 356689999998
Q ss_pred CCeEEEeecCccCceEEEEEee-CCCEEEEEECC------CeEEEEECCCCc-eeeeec--CCceeEEEEcCCCCEEEEE
Q 009569 390 GRELESWKGQKTLRISDMAITD-DGKRIISICRE------AAILLLDREANF-ERWIEE--EEVITSFSLSKDNKYLLVN 459 (532)
Q Consensus 390 ~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d------g~I~iwd~~~~~-~~~~~~--~~~i~~~~~sp~~~~l~~~ 459 (532)
++........ ...+..+.|+| ++..|+.++.+ ..|.+||+.+.. ..+..+ ...+..++|+|||++|+..
T Consensus 177 ~g~~~~~~~~-~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (396)
T 3c5m_A 177 TGELEVIHQD-TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYV 255 (396)
T ss_dssp TCCEEEEEEE-SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEE
T ss_pred CCcEEeeccC-CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEE
Confidence 8776655543 33789999999 78877776643 468999987765 333332 2357889999999988777
Q ss_pred ecC-----CeEEEEecCCCCcceeEEeccccceEEEEEccCCC-CCcEEEEEe----------------CCCcEEEEeCC
Q 009569 460 LIN-----QEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGF-EQAFIASGS----------------EDSQVNIFLSF 517 (532)
Q Consensus 460 ~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~-d~~~l~sgs----------------~dg~i~iw~~~ 517 (532)
+.+ +.|++||+.++ +... +..... . . ..| +| ||+++++++ .++.|++||+.
T Consensus 256 ~~~~~~~~~~l~~~d~~~g-~~~~-l~~~~~-~-~--~~~-s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 256 SYFKGQTDRVIYKANPETL-ENEE-VMVMPP-C-S--HLM-SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp EEETTTCCEEEEEECTTTC-CEEE-EEECCS-E-E--EEE-ECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred ecCCCCccceEEEEECCCC-CeEE-eeeCCC-C-C--CCc-cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 544 44999999876 3322 221111 1 1 455 78 999888765 34789999999
Q ss_pred CCCceee
Q 009569 518 SPFAKKI 524 (532)
Q Consensus 518 ~~~~~~~ 524 (532)
++....+
T Consensus 329 ~~~~~~l 335 (396)
T 3c5m_A 329 AKSAQKL 335 (396)
T ss_dssp TTBCCEE
T ss_pred cCceEEc
Confidence 8876544
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.77 E-value=7.5e-18 Score=183.15 Aligned_cols=258 Identities=14% Similarity=0.102 Sum_probs=174.5
Q ss_pred CCCCceeeccCCccCCCCCcceeEEcccccc---cEEEEEEccCCCEEEEEeC---------CCeEEEEEeecCCeeEEE
Q 009569 243 SDSDFSLYSDHQCGRNRIPSQTLQILEAHSD---EVWFLQFSHDGKYLASSSK---------DQSAIIWEVKEDGQVSLK 310 (532)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~---~V~~v~~s~~g~~las~s~---------dg~i~iwd~~~~~~~~~~ 310 (532)
.++.+.+|+..+ .++...+.+|.. .|.+++|||||++||+++. ++.|++||+.++.... .
T Consensus 34 ~d~~i~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~-~ 105 (719)
T 1z68_A 34 ADNNIVLYNIET-------GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR-G 105 (719)
T ss_dssp TTSCEEEEESSS-------CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-S
T ss_pred CCCCEEEEEcCC-------CcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc-c
Confidence 455666765443 344555555544 4899999999999998876 7899999998652200 0
Q ss_pred EEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEee-ccCCce-----------------EEEEEeeCCC
Q 009569 311 HRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYE-KTGVGL-----------------ISCGWFLDGG 372 (532)
Q Consensus 311 ~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~i-----------------~~~~~~~~~~ 372 (532)
..+ ...+..++|||||+.|+++. ++.|++||+.+++...... ++...+ .+++|+|||+
T Consensus 106 ~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~ 181 (719)
T 1z68_A 106 NEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGK 181 (719)
T ss_dssp SCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSS
T ss_pred eec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCC
Confidence 111 35688999999999999986 7899999999887654332 222212 4899999999
Q ss_pred eEEEEeCCC----------------------------------cEEEEECCCCeEE---Eee-----cCccCceEEEEEe
Q 009569 373 GIFAGMTDK----------------------------------SICLWDLDGRELE---SWK-----GQKTLRISDMAIT 410 (532)
Q Consensus 373 ~l~~~~~dg----------------------------------~i~iwd~~~~~~~---~~~-----~~~~~~v~~~~~s 410 (532)
.|++++.|. .|++||+.++... ... ..+...+..++|+
T Consensus 182 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S 261 (719)
T 1z68_A 182 FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWV 261 (719)
T ss_dssp EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEES
T ss_pred EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEe
Confidence 999987552 7889999876531 221 1244478999999
Q ss_pred eCCCEEEEEECC----CeEEEEE----CCCCc-eee-----eecCCcee-----EEEEcCCCCEEEE--EecCC--eEEE
Q 009569 411 DDGKRIISICRE----AAILLLD----REANF-ERW-----IEEEEVIT-----SFSLSKDNKYLLV--NLINQ--EIHL 467 (532)
Q Consensus 411 ~~~~~l~~~~~d----g~I~iwd----~~~~~-~~~-----~~~~~~i~-----~~~~sp~~~~l~~--~~~dg--~i~i 467 (532)
||++++++.... ..|.+|| ..++. ... ..+...+. .+.|+|||+.++. +..+| .|++
T Consensus 262 pD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~ 341 (719)
T 1z68_A 262 TDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHY 341 (719)
T ss_dssp SSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEE
T ss_pred CCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEE
Confidence 998777664432 2488999 77765 222 24556666 8899999996654 44455 5777
Q ss_pred EecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCC-----CcEEEEeCCC
Q 009569 468 WSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSED-----SQVNIFLSFS 518 (532)
Q Consensus 468 wd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~d-----g~i~iw~~~~ 518 (532)
||+.++ + ...+..+...+ ....+ + +++.|+..+.+ +.+.+|.+..
T Consensus 342 ~~~~~~-~-~~~lt~~~~~v--~~~~~-~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 342 IKDTVE-N-AIQITSGKWEA--INIFR-V-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp ESSCST-T-CEECSCSSSCE--EEEEE-E-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred EECCCC-c-eEecccCceEE--EEEEE-E-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 787665 3 45555544432 23445 3 66666655554 7888888754
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.75 E-value=3.4e-17 Score=163.90 Aligned_cols=249 Identities=12% Similarity=0.048 Sum_probs=168.6
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEE--eCCCCCEEEEe----
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVS--WSPNDHQLLTC---- 335 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~--~s~~~~~l~s~---- 335 (532)
.+..+...+|...+..++|+|||+.|+.++.++.|++||+.++.. ...+..+...+.... ++|++.+++..
T Consensus 70 g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~---~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~ 146 (388)
T 3pe7_A 70 QVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEE---NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRR 146 (388)
T ss_dssp CEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCE---EEEEECCTTEEEEEEEEECTTSSEEEEEEEEG
T ss_pred CceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcc---eeeeechhhcccccceeECCCCCeeccccccC
Confidence 344555566666666788999999999999999999999987643 223344555454444 48999988743
Q ss_pred ------------------eCCCcEEEEECCCCcEEEEeeccCCceEEEEEee-CCCeEEEEeCC------CcEEEEECCC
Q 009569 336 ------------------GQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFL-DGGGIFAGMTD------KSICLWDLDG 390 (532)
Q Consensus 336 ------------------~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~ 390 (532)
..+..|.+||+.+++.... ..+...+..+.|+| +|+.|+.+..+ ..|.++|..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~ 225 (388)
T 3pe7_A 147 EDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG 225 (388)
T ss_dssp GGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS
T ss_pred cccccccccchhhhhhccCCcceEEEEECCCCceEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC
Confidence 2446899999999876544 34566789999999 99998877653 3788999887
Q ss_pred CeEEEeecCcc-CceEEEEEeeCCCEEEEEEC-CC----eEEEEECCCCce-eeeecCCc------eeEEEEcCCCCEEE
Q 009569 391 RELESWKGQKT-LRISDMAITDDGKRIISICR-EA----AILLLDREANFE-RWIEEEEV------ITSFSLSKDNKYLL 457 (532)
Q Consensus 391 ~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~-dg----~I~iwd~~~~~~-~~~~~~~~------i~~~~~sp~~~~l~ 457 (532)
.....+..... ..+..++|+|||+.|+..+. ++ .|++||+.+++. .+...... ...+.|+|||+.|+
T Consensus 226 ~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~ 305 (388)
T 3pe7_A 226 TNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAP 305 (388)
T ss_dssp CCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-
T ss_pred CceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcce
Confidence 76666655442 25788999999997766543 22 399999998873 22222210 22247999999888
Q ss_pred EE---------ecCCeEEEEecCCCCcceeEEeccccce---------EEEEEccCCCCCcEEEEEe-CCCcEEEEeCC
Q 009569 458 VN---------LINQEIHLWSIESDPKLVSRYKGHKRAR---------FVIRSCFGGFEQAFIASGS-EDSQVNIFLSF 517 (532)
Q Consensus 458 ~~---------~~dg~i~iwd~~~~~~~~~~~~~~~~~~---------~~i~~~~~s~d~~~l~sgs-~dg~i~iw~~~ 517 (532)
.. ..+..|++||+.++ + +..+..+.... ......| +|||+.|+..+ .+|...+|.++
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~~-~-~~~l~~~~~~~~~~~~~~~~~~~~~~~-spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 306 VDVQDDSGYKIENDPFLYVFNMKNG-T-QHRVARHDTSWKVFEGDRQVTHPHPSF-TPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp -----------CCCCEEEEEETTTT-E-EEEEEECCCCCCCBTTBSSTTCCCCEE-CTTSSEEEEEECTTSSCEEEEEE
T ss_pred eEeeeccccccCCCCEEEEEeccCC-c-eEEeccccCcccccccccccCCCCccC-CCCCCEEEEEecCCCceeEEEEE
Confidence 64 44668999999886 3 34455444300 1233456 99999887665 46666666543
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=3.7e-16 Score=153.01 Aligned_cols=240 Identities=10% Similarity=0.039 Sum_probs=176.1
Q ss_pred cccEEEEEEccCCCEEEEEeCC------------------------CeEEEEEeecCCeeEEEEEee-cCCCCeEEEEeC
Q 009569 272 SDEVWFLQFSHDGKYLASSSKD------------------------QSAIIWEVKEDGQVSLKHRLS-GHRKPVFTVSWS 326 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~d------------------------g~i~iwd~~~~~~~~~~~~~~-~h~~~v~~l~~s 326 (532)
-+.|.+++++|+|+++++.+.+ ++|.+||..++.. ...+. ++-.....++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~---~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI---LQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE---EEEECTTTCSSEEEEEEC
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE---EeccCCCccCCceEEEEC
Confidence 4679999999999999988777 4799999876532 23332 445678999999
Q ss_pred CCCCEEEEeeCCCcEEEEECCCCc-EEEEee---------ccCCceEEEEEee-CCCeEEEEe-CCCcEEEEECCCCeEE
Q 009569 327 PNDHQLLTCGQEEAIRRWDVNSGE-CLHVYE---------KTGVGLISCGWFL-DGGGIFAGM-TDKSICLWDLDGRELE 394 (532)
Q Consensus 327 ~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~---------~~~~~i~~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~~~~ 394 (532)
|+|+++++...++.|++||..... .+..+. .+-..+..++++| ++..+++.+ .++.|++||..+..+.
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~ 179 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVT 179 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEE
Confidence 999988888889999999986442 445442 3334688999999 788777775 6899999997766555
Q ss_pred EeecC---------ccCceEEEEEeeC-CCEEEEEECCCeEEEEECCCCc-eeee---ecCCceeEEEEcCCCCEEEEE-
Q 009569 395 SWKGQ---------KTLRISDMAITDD-GKRIISICREAAILLLDREANF-ERWI---EEEEVITSFSLSKDNKYLLVN- 459 (532)
Q Consensus 395 ~~~~~---------~~~~v~~~~~s~~-~~~l~~~~~dg~I~iwd~~~~~-~~~~---~~~~~i~~~~~sp~~~~l~~~- 459 (532)
.+... +-.....++++|+ +.++++...++.|++||..+++ .... .+...+..++++| +..+.+.
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g 258 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNG 258 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEEC
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCC
Confidence 44321 1124899999998 6667777788999999998665 2222 3456688999999 4333333
Q ss_pred ------ecCCeEEEEecCCCCcceeEEe---ccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 460 ------LINQEIHLWSIESDPKLVSRYK---GHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 460 ------~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
..+..|++||..++ +.+..+. ++.... ..+++ +|+|.++++...+++|++|++...
T Consensus 259 ~~~v~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~~p--~~ia~-~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSSG-EIIDVFKPVRKHFDMP--HDIVA-SEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CCCTTCSCCCCEEEEETTTC-CEEEEECCSSSCCSSE--EEEEE-CTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CEEeccCCCcEEEEEEcCCC-eEEEEEcCCCCccCCe--eEEEE-CCCCCEEEEECCCCEEEEEeCCcc
Confidence 33458999999888 7777773 343333 33555 899988888889999999998753
No 167
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.74 E-value=9.2e-16 Score=166.35 Aligned_cols=241 Identities=12% Similarity=0.079 Sum_probs=171.7
Q ss_pred cccccEEEEEEccCCCEEEEEeCCC-----eEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCc----
Q 009569 270 AHSDEVWFLQFSHDGKYLASSSKDQ-----SAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEA---- 340 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~s~dg-----~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~---- 340 (532)
+|...+..++|||||++||.++.++ .|++||+.++..... .+.. ..+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~--~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD--VLER--VKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE--EEEE--ECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc--cccC--cccceEEEEeCCCEEEEEEECCccccc
Confidence 3555788999999999999765543 899999987643221 2222 12667999999999999888766
Q ss_pred ------------EEEEECCCCcE--EEEeec--cCCceEEEEEeeCCCeEEEEeC-----CCcEEEEECCC------C--
Q 009569 341 ------------IRRWDVNSGEC--LHVYEK--TGVGLISCGWFLDGGGIFAGMT-----DKSICLWDLDG------R-- 391 (532)
Q Consensus 341 ------------i~iwd~~~~~~--~~~~~~--~~~~i~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~------~-- 391 (532)
|++|++.+++. ...+.. +...+..+.|+|||++|+.++. +..|++||+.+ +
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 99999988762 233332 3455788999999999988764 56899999975 4
Q ss_pred eEEEeecCccCceEEEEEeeCCCEEEEEECC----CeEEEEECCCCc----eeeeecCC--ceeEEEEcCCCCEEEEEec
Q 009569 392 ELESWKGQKTLRISDMAITDDGKRIISICRE----AAILLLDREANF----ERWIEEEE--VITSFSLSKDNKYLLVNLI 461 (532)
Q Consensus 392 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~I~iwd~~~~~----~~~~~~~~--~i~~~~~sp~~~~l~~~~~ 461 (532)
....+..+.. .+.. .|+|+|+.|+..+.. +.|.+||+.+.. ..+..+.. .+..++|++++.++++...
T Consensus 278 ~~~~l~~~~~-~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 278 KWVKLIDNFE-GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp CCEEEECSSS-SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred ceEEeeCCCC-cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 3445544443 3443 588999988877653 369999998763 44555544 6888999988888888888
Q ss_pred CCe--EEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEE-e---CCCcEEEEeCCCCC
Q 009569 462 NQE--IHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASG-S---EDSQVNIFLSFSPF 520 (532)
Q Consensus 462 dg~--i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sg-s---~dg~i~iw~~~~~~ 520 (532)
++. |++||+.++ +.+..+..+... +..+.+ +|++..++.. + ..+.|+.||+.++.
T Consensus 356 ~g~~~l~~~~~~~g-~~~~~l~~~~~~--v~~~~~-s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 356 DVKNTLQLHDLATG-ALLKIFPLEVGS--VVGYSG-QKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTEEEEEEEETTTC-CEEEEECCCSSE--EEEEEC-CTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEEECCCC-CEEEecCCCCce--EEEEec-CCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 885 566777566 566777766443 333455 7888766533 2 35789999999877
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.74 E-value=6.5e-16 Score=153.28 Aligned_cols=261 Identities=13% Similarity=0.081 Sum_probs=180.0
Q ss_pred CCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEe----------CCCeEEEEEeecCCeeEEEEEe
Q 009569 244 DSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSS----------KDQSAIIWEVKEDGQVSLKHRL 313 (532)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s----------~dg~i~iwd~~~~~~~~~~~~~ 313 (532)
++.+.+|+..+ .+.+..+..+..+ .++|+|||+++++++ .++.|.+||..+......+...
T Consensus 30 d~~v~v~D~~t-------~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~ 100 (361)
T 2oiz_A 30 ESRVHVYDYTN-------GKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLP 100 (361)
T ss_dssp GCEEEEEETTT-------CCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEEC
T ss_pred cCeEEEEECCC-------CeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcC
Confidence 44566775332 3455666666655 899999999999876 3678999998765433222221
Q ss_pred ec---CCCCeEEEEeCCCCCEEEEeeC--CCcEEEEECCCCcEEEE-eeccCCceEEEEEeeCC-CeEEEEeCCCcEEEE
Q 009569 314 SG---HRKPVFTVSWSPNDHQLLTCGQ--EEAIRRWDVNSGECLHV-YEKTGVGLISCGWFLDG-GGIFAGMTDKSICLW 386 (532)
Q Consensus 314 ~~---h~~~v~~l~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iw 386 (532)
.. +......++++|||++|+++.. +++|.+||+.+++.+.. +.... ...+.+.|++ ..+++.+.||.+.+|
T Consensus 101 ~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v 178 (361)
T 2oiz_A 101 PKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTI 178 (361)
T ss_dssp TTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEE
T ss_pred ccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEE
Confidence 11 2244667999999999998874 57999999999988877 54322 2335667765 677888899999999
Q ss_pred ECCC-CeEE-Ee-----ecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCceeeee----------c----CCcee
Q 009569 387 DLDG-RELE-SW-----KGQKTLRISDMAITDDGKRIISICREAAILLLDREANFERWIE----------E----EEVIT 445 (532)
Q Consensus 387 d~~~-~~~~-~~-----~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~~~~~~----------~----~~~i~ 445 (532)
++.. +... .. ..... ....+.+++++..++..+.++.|.++|+......... . .....
T Consensus 179 ~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~ 257 (361)
T 2oiz_A 179 NLGEDGKVASQSRSKQMFSVKD-DPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYN 257 (361)
T ss_dssp EECTTSSEEEEEECCCCSCTTT-SCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSS
T ss_pred EECCCCcEeeeccccceEcCCC-CceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCee
Confidence 9854 3332 11 11111 1223445788888888889999999999765411111 0 01112
Q ss_pred EEEEcCCCCEEEEEec-----------CCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEE
Q 009569 446 SFSLSKDNKYLLVNLI-----------NQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIF 514 (532)
Q Consensus 446 ~~~~sp~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw 514 (532)
.++|+|+++.++++.. .+.|.+||+.+. +.+.++..+. + ..+.| +|||++|++++. +.|.+|
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-~~v~~i~~~~-p---~~ia~-spdg~~l~v~n~-~~v~v~ 330 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-QRVARIPGRD-A---LSMTI-DQQRNLMLTLDG-GNVNVY 330 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-EEEEEEECTT-C---CEEEE-ETTTTEEEEECS-SCEEEE
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC-cEEEEEecCC-e---eEEEE-CCCCCEEEEeCC-CeEEEE
Confidence 3789999988887654 348999999998 8888888776 3 33556 999999998887 999999
Q ss_pred eCCCCCcee
Q 009569 515 LSFSPFAKK 523 (532)
Q Consensus 515 ~~~~~~~~~ 523 (532)
|..++.++.
T Consensus 331 D~~t~~l~~ 339 (361)
T 2oiz_A 331 DISQPEPKL 339 (361)
T ss_dssp ECSSSSCEE
T ss_pred ECCCCccee
Confidence 999983333
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=1.1e-16 Score=172.26 Aligned_cols=250 Identities=8% Similarity=0.053 Sum_probs=178.1
Q ss_pred EEcccccccEEEEEEccCCCEEEEE--eCCCeEEEEEeecCCeeEEEEEeecCCCCeE---------EEEeC--CCCCE-
Q 009569 266 QILEAHSDEVWFLQFSHDGKYLASS--SKDQSAIIWEVKEDGQVSLKHRLSGHRKPVF---------TVSWS--PNDHQ- 331 (532)
Q Consensus 266 ~~l~~h~~~V~~v~~s~~g~~las~--s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~---------~l~~s--~~~~~- 331 (532)
..+.+|...|..++|++++-++++. +.++...||....++. ...+..|...+. ...|+ |||+.
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~ 93 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGA---EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPL 93 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSC---EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCC---cceeCCCCccccccccccCCccceeeeecCCCeE
Confidence 3467799999999999887777777 5688999999754443 355666666655 55565 99998
Q ss_pred EEEeeC-CCcEEEEECC--C-CcEEEEeec-----cCCceEEEEEeeCCCeEEEEeCC----------CcEEEEECCC--
Q 009569 332 LLTCGQ-EEAIRRWDVN--S-GECLHVYEK-----TGVGLISCGWFLDGGGIFAGMTD----------KSICLWDLDG-- 390 (532)
Q Consensus 332 l~s~~~-dg~i~iwd~~--~-~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~-- 390 (532)
|+.++. +..|.+|++. + ++ ...+.. +...+.+++|+|||+.|++++.+ ..|++||+.+
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 172 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSA 172 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTT
T ss_pred EEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCc
Confidence 776554 5667777765 3 43 444544 56678899999999999998876 5899999988
Q ss_pred ----CeEEEee-cCccCceEEEEEeeCCCEEEEEECC--------CeEEEEECC-CC---c-eeeee-cCCceeEEEEcC
Q 009569 391 ----RELESWK-GQKTLRISDMAITDDGKRIISICRE--------AAILLLDRE-AN---F-ERWIE-EEEVITSFSLSK 451 (532)
Q Consensus 391 ----~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d--------g~I~iwd~~-~~---~-~~~~~-~~~~i~~~~~sp 451 (532)
+....+. ... ..+..++|+|||++|+.++.+ ..|++||+. ++ . ..+.. +...+..++|+|
T Consensus 173 ~~~~~~~~~l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp 251 (662)
T 3azo_A 173 AADRSAVRELSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP 251 (662)
T ss_dssp TTCGGGSEESSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT
T ss_pred cccCCceeEEEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC
Confidence 6666555 433 378889999999999988755 379999998 56 3 33333 467899999999
Q ss_pred CCCEEEEEecCC--eEEEEecCCCCcceeEEeccccce---E---EEEEccCCCCCcEEEEEeCCCcEEEE--eCCCCCc
Q 009569 452 DNKYLLVNLINQ--EIHLWSIESDPKLVSRYKGHKRAR---F---VIRSCFGGFEQAFIASGSEDSQVNIF--LSFSPFA 521 (532)
Q Consensus 452 ~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~---~---~i~~~~~s~d~~~l~sgs~dg~i~iw--~~~~~~~ 521 (532)
||++++++..++ .|++||+.++ +.......+.... + ...+.| ++++.++++++. +.+.+| +..++..
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~~~~~~p~w~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATG-AATQLCRREEEFAGPLWTPGMRWFAP-LANGLIAVVHGK-GAAVLGILDPESGEL 328 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTC-CEEESSCCSSBSSCCCCSTTCCSEEE-CTTSCEEEEEBS-SSCEEEEEETTTTEE
T ss_pred CCeEEEEECCCCCeEEEEEECCCC-ceeecccccccccCccccccCceEeE-eCCCEEEEEEEc-CccEEEEEECCCCcE
Confidence 999888888788 6777776555 3332222222110 0 112344 789999999998 999999 5555554
Q ss_pred ee
Q 009569 522 KK 523 (532)
Q Consensus 522 ~~ 523 (532)
..
T Consensus 329 ~~ 330 (662)
T 3azo_A 329 VD 330 (662)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 170
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=1.9e-15 Score=149.86 Aligned_cols=205 Identities=15% Similarity=0.242 Sum_probs=142.7
Q ss_pred eEEcccccccEEEEEEccCCCEEEEEe-CCCeEEEEEeecCCeeEEEE---Eeec--------CCCCeEEEEeCCCCCEE
Q 009569 265 LQILEAHSDEVWFLQFSHDGKYLASSS-KDQSAIIWEVKEDGQVSLKH---RLSG--------HRKPVFTVSWSPNDHQL 332 (532)
Q Consensus 265 ~~~l~~h~~~V~~v~~s~~g~~las~s-~dg~i~iwd~~~~~~~~~~~---~~~~--------h~~~v~~l~~s~~~~~l 332 (532)
+.....+......+++ ++++|++++ .++.|.+|++...+.+.... ...+ +...+.+++|+|+|+++
T Consensus 92 ~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 92 LNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp EEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred eeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 3344445567778888 888777766 68899999997654332111 1111 12345889999999977
Q ss_pred EEeeC-CCcEEEEECCCCcE------E-------EEeeccCCceEEEEEeeCCCeEEEEe-CCCcEEEEECCCCeEEEee
Q 009569 333 LTCGQ-EEAIRRWDVNSGEC------L-------HVYEKTGVGLISCGWFLDGGGIFAGM-TDKSICLWDLDGRELESWK 397 (532)
Q Consensus 333 ~s~~~-dg~i~iwd~~~~~~------~-------~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~ 397 (532)
++++. ++.|.+|++..... + .........+..++|+|+|+++++++ .++.|.+||++++.+....
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE
Confidence 66654 78999999875431 1 11223455678999999999887777 6899999999876543322
Q ss_pred -----cCccCceEEEEEeeCCCEEEEEECC--CeEEEEECC--CCc---eeeeecCCceeEEEEcCCCCEEEEEe-cCCe
Q 009569 398 -----GQKTLRISDMAITDDGKRIISICRE--AAILLLDRE--ANF---ERWIEEEEVITSFSLSKDNKYLLVNL-INQE 464 (532)
Q Consensus 398 -----~~~~~~v~~~~~s~~~~~l~~~~~d--g~I~iwd~~--~~~---~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~ 464 (532)
..+.....+++|+|||++|+++..+ +.|.+|++. ++. .........+.+++|+|||++|++++ .++.
T Consensus 250 ~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~ 329 (361)
T 3scy_A 250 TVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNV 329 (361)
T ss_dssp EEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTE
T ss_pred EEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCC
Confidence 1122356899999999998777654 899999986 333 11222245688999999999998887 5789
Q ss_pred EEEEecC
Q 009569 465 IHLWSIE 471 (532)
Q Consensus 465 i~iwd~~ 471 (532)
|.+|++.
T Consensus 330 v~v~~~d 336 (361)
T 3scy_A 330 IQIFERD 336 (361)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 9997654
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=2.3e-15 Score=149.61 Aligned_cols=234 Identities=10% Similarity=0.095 Sum_probs=156.7
Q ss_pred EEEEEeCC--CeEEEEEeec-CCeeEEEEEee-cCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECC-CCcEEEEeecc-C
Q 009569 286 YLASSSKD--QSAIIWEVKE-DGQVSLKHRLS-GHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVN-SGECLHVYEKT-G 359 (532)
Q Consensus 286 ~las~s~d--g~i~iwd~~~-~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~-~ 359 (532)
++++|+.. +.|.+|++.. .+.+....... .....+..++|+|++++|++++.+ .|.+|++. +++........ .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 35555543 5788888753 23443333322 234467889999999999999888 99999997 78765443321 1
Q ss_pred CceEEEEEeeCCCe--EEEEe-------------CCCcEEEEECC-CCeEEE-eec---CccCceEEEEEeeCCCEEEEE
Q 009569 360 VGLISCGWFLDGGG--IFAGM-------------TDKSICLWDLD-GRELES-WKG---QKTLRISDMAITDDGKRIISI 419 (532)
Q Consensus 360 ~~i~~~~~~~~~~~--l~~~~-------------~dg~i~iwd~~-~~~~~~-~~~---~~~~~v~~~~~s~~~~~l~~~ 419 (532)
+.+.+++|+|+|++ ++++. .++.+.+|++. .+.+.. ... .+...+.+++|+|||++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 23556889999995 44553 68999999996 343322 211 233479999999999988877
Q ss_pred EC-CCeEEEEECC-CCcee---eee---cCCceeEEEEcCCCCEEEEEec-CCeEEEEecC--CCCcce---eEEeccc-
Q 009569 420 CR-EAAILLLDRE-ANFER---WIE---EEEVITSFSLSKDNKYLLVNLI-NQEIHLWSIE--SDPKLV---SRYKGHK- 484 (532)
Q Consensus 420 ~~-dg~I~iwd~~-~~~~~---~~~---~~~~i~~~~~sp~~~~l~~~~~-dg~i~iwd~~--~~~~~~---~~~~~~~- 484 (532)
.. ++.|++||+. +++.. ... +...+..++|+|||+++++++. ++.|.+|++. ++ +.. ..+....
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g-~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATH-MPVYTHHSFPLIPP 241 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTC-CEEEEEEEEESSCT
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCC-cEEEccceEEcCCC
Confidence 64 6899999998 56521 121 2556899999999999988775 6899999875 33 332 1222111
Q ss_pred ---cce-------EEEEEc-cCCCCCcEEEEEeCCC------cEEEEeCC-CCCce
Q 009569 485 ---RAR-------FVIRSC-FGGFEQAFIASGSEDS------QVNIFLSF-SPFAK 522 (532)
Q Consensus 485 ---~~~-------~~i~~~-~~s~d~~~l~sgs~dg------~i~iw~~~-~~~~~ 522 (532)
... ....++ | +|||++|++++.+. .|.+|++. ++...
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~-spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCAL-TFSGKYMFASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEE-CTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred CcCCcccccccccccccEEEE-CCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEE
Confidence 001 234566 5 99999988776432 89999996 56544
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=4.5e-15 Score=142.86 Aligned_cols=245 Identities=10% Similarity=0.038 Sum_probs=177.1
Q ss_pred ceeEEcccccccEEEEEEccCCC-EEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcE
Q 009569 263 QTLQILEAHSDEVWFLQFSHDGK-YLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAI 341 (532)
Q Consensus 263 ~~~~~l~~h~~~V~~v~~s~~g~-~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i 341 (532)
..+..+..+.....+++|+|+|+ +++++..++.|..|+..++ . ..+..+...+.+++++|+|+++++...++.|
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~---~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--L---SPEMHPSHHQNGHCLNKQGHLIACSHGLRRL 92 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--E---EEEESSCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--e---EEEECCCCCcceeeECCCCcEEEEecCCCeE
Confidence 34445556667788999999998 7788888999999998754 2 3455677889999999999988877777899
Q ss_pred EEEECCCCcEEEEeecc----CCceEEEEEeeCCCeEEE----Ee-------------CCCcEEEEECCCCeEEEeecCc
Q 009569 342 RRWDVNSGECLHVYEKT----GVGLISCGWFLDGGGIFA----GM-------------TDKSICLWDLDGRELESWKGQK 400 (532)
Q Consensus 342 ~iwd~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~----~~-------------~dg~i~iwd~~~~~~~~~~~~~ 400 (532)
.+||..+++........ ...+..++++|+|+++++ |+ ..+.|..++.. +.........
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~ 171 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR 171 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC
Confidence 99999888765443322 234567999999998887 33 13467777766 4444444333
Q ss_pred cCceEEEEEeeCCCEEEEEECCCeEEEEECC-CCce-----eeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCC
Q 009569 401 TLRISDMAITDDGKRIISICREAAILLLDRE-ANFE-----RWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDP 474 (532)
Q Consensus 401 ~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~-~~~~-----~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~ 474 (532)
.....++|+|+++.+++.+.++.|.+||+. ++.. .+..+...+.+++++++|++.++. ++.|.+||.. +
T Consensus 172 -~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g- 246 (296)
T 3e5z_A 172 -VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-G- 246 (296)
T ss_dssp -SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-S-
T ss_pred -CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-C-
Confidence 367899999999988777778999999986 3222 111234456789999999866655 8899999986 4
Q ss_pred cceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 475 KLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 475 ~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
+.+..+..+.. + ..++|.+++++.|++++.+ .++.++..+..++
T Consensus 247 ~~~~~~~~~~~-~--~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 247 DELGRVLTPQT-T--SNLCFGGPEGRTLYMTVST-EFWSIETNVRGLE 290 (296)
T ss_dssp CEEEEEECSSC-C--CEEEEESTTSCEEEEEETT-EEEEEECSCCBCC
T ss_pred CEEEEEECCCC-c--eeEEEECCCCCEEEEEcCC-eEEEEEccccccc
Confidence 67777776655 3 3355646899988888765 4666677665543
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=1.7e-14 Score=141.14 Aligned_cols=249 Identities=10% Similarity=0.036 Sum_probs=174.2
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC---
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE--- 338 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d--- 338 (532)
......+..+...+.+++|+|+|++++++..++.|.+||..++. . ......+...+.+++|+|+++++++...+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~-~--~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~ 110 (333)
T 2dg1_A 34 AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE-I--KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKS 110 (333)
T ss_dssp CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC-E--EEEEECSSSSEEEEEECTTSCEEEEECTTSSS
T ss_pred cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc-E--EEEeeCCCCCcceEEECCCCcEEEEeCCCCCC
Confidence 45566677777888999999999988888889999999987653 2 22222466789999999999988877666
Q ss_pred -CcEEEEECCCCcEEEEee--ccCCceEEEEEeeCCCeEEEEeC------CCcEEEEECCCCeEEEeecCccCceEEEEE
Q 009569 339 -EAIRRWDVNSGECLHVYE--KTGVGLISCGWFLDGGGIFAGMT------DKSICLWDLDGRELESWKGQKTLRISDMAI 409 (532)
Q Consensus 339 -g~i~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 409 (532)
+.|.+||..++.....+. .....+.+++++|+|+.+++... .+.|..||..++....+.... ..+..++|
T Consensus 111 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~i~~ 189 (333)
T 2dg1_A 111 TGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI-SVANGIAL 189 (333)
T ss_dssp CCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE-SSEEEEEE
T ss_pred CceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC-CcccceEE
Confidence 689999998877553433 23456889999999987776553 356777777765554443322 25789999
Q ss_pred eeCCCEEEEE-ECCCeEEEEECCC-Cc-ee------eeec--CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCccee
Q 009569 410 TDDGKRIISI-CREAAILLLDREA-NF-ER------WIEE--EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVS 478 (532)
Q Consensus 410 s~~~~~l~~~-~~dg~I~iwd~~~-~~-~~------~~~~--~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~ 478 (532)
+|+++.++.+ +.++.|.+||..+ +. .. .... ...+..++++++|+++++...++.|.+||.. + +.+.
T Consensus 190 ~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g-~~~~ 267 (333)
T 2dg1_A 190 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-G-YPIG 267 (333)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-S-CEEE
T ss_pred CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC-C-CEEE
Confidence 9999866554 4678999999864 22 11 1111 1367889999999988887778999999984 4 5666
Q ss_pred EEeccccc----eEEEEEccCCCCCcEEEEEeCCC------cEEEEeCC
Q 009569 479 RYKGHKRA----RFVIRSCFGGFEQAFIASGSEDS------QVNIFLSF 517 (532)
Q Consensus 479 ~~~~~~~~----~~~i~~~~~s~d~~~l~sgs~dg------~i~iw~~~ 517 (532)
.+..+... .....++| ++|+..|+.++.++ .|+..+..
T Consensus 268 ~~~~~~~~~g~~~~~~~~~~-~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 268 QILIPGRDEGHMLRSTHPQF-IPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp EEECTTGGGTCSCBCCEEEE-CTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred EEEcCCCccccccCcceEEE-CCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 66544320 01234566 78887776665553 45555544
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=2.9e-16 Score=157.31 Aligned_cols=239 Identities=10% Similarity=-0.001 Sum_probs=161.0
Q ss_pred EEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEE-------------------EEeCCCCCEEEEe-
Q 009569 276 WFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFT-------------------VSWSPNDHQLLTC- 335 (532)
Q Consensus 276 ~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~-------------------l~~s~~~~~l~s~- 335 (532)
..+.|+|||++|+.++.++.|++|++.++.. . .....+...... +.|+|+++.++.+
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~-~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~ 160 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEE-Q--VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAE 160 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCE-E--EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCc-E--EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeee
Confidence 3478999999999999999999999986532 2 222223332222 3578888777654
Q ss_pred ----eCCCcEEEEECCCCcEEEEeeccCCceEEEEEee-CCCeEEEEeCC------CcEEEEECCCCeEEEeecCc-cCc
Q 009569 336 ----GQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFL-DGGGIFAGMTD------KSICLWDLDGRELESWKGQK-TLR 403 (532)
Q Consensus 336 ----~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~-~~~ 403 (532)
..+..|.+||+.+++..... .+...+..+.|+| +++.++..+.+ ..|.+||+.++......... ...
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 239 (396)
T 3c5m_A 161 FYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGES 239 (396)
T ss_dssp HHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEE
T ss_pred eccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcc
Confidence 35668999999988866554 4566788999999 78877766543 46899999876655554432 225
Q ss_pred eEEEEEeeCCCEEEEEECC-----CeEEEEECCCCceeeeecCCceeEEEEcC-CCCEEEEEe----------------c
Q 009569 404 ISDMAITDDGKRIISICRE-----AAILLLDREANFERWIEEEEVITSFSLSK-DNKYLLVNL----------------I 461 (532)
Q Consensus 404 v~~~~~s~~~~~l~~~~~d-----g~I~iwd~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~----------------~ 461 (532)
+..++|+|||+.|+.++.+ +.|++||+.++............ +.|+| ||+++++++ .
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 8889999999988777644 45999999887733222222233 89999 999888754 2
Q ss_pred CCeEEEEecCCCCcceeEEeccccce---------EEEEEccCCCCCcEEEEEeC-CCc--EEEEeCCCCCce
Q 009569 462 NQEIHLWSIESDPKLVSRYKGHKRAR---------FVIRSCFGGFEQAFIASGSE-DSQ--VNIFLSFSPFAK 522 (532)
Q Consensus 462 dg~i~iwd~~~~~~~~~~~~~~~~~~---------~~i~~~~~s~d~~~l~sgs~-dg~--i~iw~~~~~~~~ 522 (532)
++.|++||+.++ +. ..+..+.... ......| +|||+.|+.++. ++. |+.+++.++...
T Consensus 319 ~~~i~~~d~~~~-~~-~~l~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 319 DPFLYVLNTKAK-SA-QKLCKHSTSWDVLDGDRQITHPHPSF-TPNDDGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp CCEEEEEETTTT-BC-CEEEECCCCCCCBTTBSSTTCCCCEE-CTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred CCcEEEEecccC-ce-EEccCCCCccccccccccCCCCCceE-ccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence 478999999876 33 3444443310 0122345 899998887765 454 555566665443
No 175
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.71 E-value=1.2e-15 Score=165.14 Aligned_cols=244 Identities=10% Similarity=-0.002 Sum_probs=169.1
Q ss_pred cccccEEEEEEccCCCEEE-----EEeCCCeEEEEEeecCCeeEEEEEeecCCCCe--EEEEeCCCCCEEEEeeCCCc--
Q 009569 270 AHSDEVWFLQFSHDGKYLA-----SSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPV--FTVSWSPNDHQLLTCGQEEA-- 340 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~la-----s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v--~~l~~s~~~~~l~s~~~dg~-- 340 (532)
+|...+.+++|||||++|| .|+.+.+|++||+.++.... ..+...+ ..++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-----~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-----VDVIEGGKYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-----SCCBSCCTTCCCEECTTSSEEEEEECCCCTT
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-----CcccCcccccceEEecCCCEEEEEEecCCCC
Confidence 5666899999999999999 34445789999998764210 1122222 67899999999999988776
Q ss_pred -----------EEEEECCCCcE--EEEee--ccCCceEEEEEeeCCCeEEEEeCCC----cEEEEECCCCeEEEeecCcc
Q 009569 341 -----------IRRWDVNSGEC--LHVYE--KTGVGLISCGWFLDGGGIFAGMTDK----SICLWDLDGRELESWKGQKT 401 (532)
Q Consensus 341 -----------i~iwd~~~~~~--~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~ 401 (532)
|++|++.++.. ...+. .+...+.++.|+|||++++.++.++ .|++||..++....+.....
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 272 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG 272 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC
Confidence 99999988762 23333 3445788999999999998887666 68888776655555554443
Q ss_pred CceEEEEEeeCCCEEEEEEC----CCeEEEEECCCCc----eeeeec--CCceeEEEEcCCCCEEEEEecCCeEEEEecC
Q 009569 402 LRISDMAITDDGKRIISICR----EAAILLLDREANF----ERWIEE--EEVITSFSLSKDNKYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 402 ~~v~~~~~s~~~~~l~~~~~----dg~I~iwd~~~~~----~~~~~~--~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~ 471 (532)
.+....+ ++|. ++..+. ++.|.+||+.++. ..+..+ ...+..++|+ ++.++++...|+..+||.+.
T Consensus 273 -~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 273 -AKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp -CCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred -ceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 4555555 6777 555443 5889999997754 344444 4458888998 77788888889988888765
Q ss_pred CCCcceeEEeccccceEEEEEccCCCCCcEEEE----EeCCCcEEEEeCCCCCceee
Q 009569 472 SDPKLVSRYKGHKRARFVIRSCFGGFEQAFIAS----GSEDSQVNIFLSFSPFAKKI 524 (532)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~s----gs~dg~i~iw~~~~~~~~~~ 524 (532)
..+.....+..+... .+..+.+ ++++..++. ....+.|++||+.+++...+
T Consensus 349 ~~g~~~~~l~~~~~~-~v~~~~~-s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 349 LKGKPVRTVQLPGVG-AASNLMG-LEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELW 403 (695)
T ss_dssp TTCCEEEECCCSSSS-EECCCBS-CTTCSEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred CCCCeeEEecCCCCe-EEEEeec-CCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 222455555544222 2223444 788877763 33457899999998875544
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=8.6e-16 Score=165.21 Aligned_cols=252 Identities=13% Similarity=0.001 Sum_probs=170.4
Q ss_pred eeEEcccccccEE---------EEEEc--cCCCE-EEEEeC-CCeEEEEEee--cCCeeEEEEEeec-----CCCCeEEE
Q 009569 264 TLQILEAHSDEVW---------FLQFS--HDGKY-LASSSK-DQSAIIWEVK--EDGQVSLKHRLSG-----HRKPVFTV 323 (532)
Q Consensus 264 ~~~~l~~h~~~V~---------~v~~s--~~g~~-las~s~-dg~i~iwd~~--~~~~~~~~~~~~~-----h~~~v~~l 323 (532)
....+..|...+. ...|+ |||++ |+.++. +..|.+|++. ..+.. ..+.. |...+..+
T Consensus 59 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~---~~l~~~~~~~~~~~~~~~ 135 (662)
T 3azo_A 59 AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP---RPLTPVSAVGGGLRWADP 135 (662)
T ss_dssp CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC---EECSCCCCSTTCEEEEEE
T ss_pred CcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC---EeccCCccCCCCccccCc
Confidence 3455666665655 56565 99998 776553 4555555543 10222 33444 66778999
Q ss_pred EeCCCCCEEEEeeCC----------CcEEEEECCC------CcEEEEee-ccCCceEEEEEeeCCCeEEEEeCC------
Q 009569 324 SWSPNDHQLLTCGQE----------EAIRRWDVNS------GECLHVYE-KTGVGLISCGWFLDGGGIFAGMTD------ 380 (532)
Q Consensus 324 ~~s~~~~~l~s~~~d----------g~i~iwd~~~------~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d------ 380 (532)
+|+|||+.|++++.+ ..|++||+.+ ++. ..+. .+...+..++|+|||++|+.++.+
T Consensus 136 ~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~ 214 (662)
T 3azo_A 136 VLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPW 214 (662)
T ss_dssp EEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTT
T ss_pred EECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCC
Confidence 999999999998876 5899999988 554 3444 455678889999999999987754
Q ss_pred --CcEEEEECC-CC---eEEEeecCccCceEEEEEeeCCCEEEEEECCC--eEEEEECCCCc-eeeeecCCc--------
Q 009569 381 --KSICLWDLD-GR---ELESWKGQKTLRISDMAITDDGKRIISICREA--AILLLDREANF-ERWIEEEEV-------- 443 (532)
Q Consensus 381 --g~i~iwd~~-~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~I~iwd~~~~~-~~~~~~~~~-------- 443 (532)
..|++||+. ++ ....+...+...+..++|+|||++++++..++ .|.+||..++. ..+..+...
T Consensus 215 ~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~ 294 (662)
T 3azo_A 215 EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTP 294 (662)
T ss_dssp TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCST
T ss_pred CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccc
Confidence 379999998 45 55555555445899999999999777777777 67777776655 333322221
Q ss_pred -eeEEEEcCCCCEEEEEecCCeEEEE--ecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCC--cEEEEeCCC
Q 009569 444 -ITSFSLSKDNKYLLVNLINQEIHLW--SIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDS--QVNIFLSFS 518 (532)
Q Consensus 444 -i~~~~~sp~~~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg--~i~iw~~~~ 518 (532)
+.+++|+|++++++++.. +.++|| |+.++ .+..+..+...+..+. .+ +.+.-++++++.+. .|++|++.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~-s~-~~~~~~~~~~~~~~~~~i~~~d~~~ 369 (662)
T 3azo_A 295 GMRWFAPLANGLIAVVHGK-GAAVLGILDPESG--ELVDAAGPWTEWAATL-TV-SGTRAVGVAASPRTAYEVVELDTVT 369 (662)
T ss_dssp TCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT--EEEECCSSCCEEEEEE-EE-ETTEEEEEEEETTEEEEEEEEETTT
T ss_pred cCceEeEeCCCEEEEEEEc-CccEEEEEECCCC--cEEEecCCCCeEEEEE-ec-CCCEEEEEEcCCCCCCEEEEEECCC
Confidence 467899999999999998 999999 44444 4667776655433221 22 33333334444443 577777777
Q ss_pred CCceee
Q 009569 519 PFAKKI 524 (532)
Q Consensus 519 ~~~~~~ 524 (532)
+....+
T Consensus 370 g~~~~l 375 (662)
T 3azo_A 370 GRARTI 375 (662)
T ss_dssp CCEEEE
T ss_pred CceEEe
Confidence 765554
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=3.9e-15 Score=145.73 Aligned_cols=240 Identities=13% Similarity=0.099 Sum_probs=172.8
Q ss_pred ccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEE
Q 009569 273 DEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECL 352 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 352 (532)
..|+++.|++++..++..+.++.++.|. + .....+..+...+.+++|+|++++++++..++.|.+||..+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---A---EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---C---EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred cccceeeecCCccceeEEeecccCcccc---c---ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE
Confidence 3467788999888888778888999992 2 234556677777899999999998888888999999999988876
Q ss_pred EEeeccCCceEEEEEeeCCCeEEEEeCC----CcEEEEECCCCeEEEeec--CccCceEEEEEeeCCCEEEEEEC-----
Q 009569 353 HVYEKTGVGLISCGWFLDGGGIFAGMTD----KSICLWDLDGRELESWKG--QKTLRISDMAITDDGKRIISICR----- 421 (532)
Q Consensus 353 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~----- 421 (532)
.....+...+.+++++|++++++++..+ +.|.+||.+++....... .....+.+++++|+|+++++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN 159 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccC
Confidence 5554566779999999999887777666 689999998766543322 22347899999999987776553
Q ss_pred -CCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEE-ecCCeEEEEecCCCCcceeEEe-----ccccceEEEEEc
Q 009569 422 -EAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVN-LINQEIHLWSIESDPKLVSRYK-----GHKRARFVIRSC 493 (532)
Q Consensus 422 -dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~~i~~~ 493 (532)
.+.|..||..+.. ..+......+..++|+|++++|+++ ..++.|++||+.+....+..+. ........-.++
T Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~ 239 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCC 239 (333)
T ss_dssp CCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEE
T ss_pred CCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceE
Confidence 3567777776655 3333444567899999999866554 5578999999964223332211 001101123345
Q ss_pred cCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 494 FGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 494 ~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
+ +++|+++++...++.|.+|+....
T Consensus 240 ~-d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 240 I-DSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp E-BTTCCEEEEEETTTEEEEECTTSC
T ss_pred E-CCCCCEEEEEcCCCEEEEECCCCC
Confidence 5 889998888778899999998543
No 178
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=6.2e-16 Score=168.47 Aligned_cols=218 Identities=11% Similarity=0.091 Sum_probs=153.1
Q ss_pred CCCceeeccCCccCCCCCcceeEEccccccc-----EEEEEEccCCCEEEEEeCC---------CeEEEEEeecCCeeEE
Q 009569 244 DSDFSLYSDHQCGRNRIPSQTLQILEAHSDE-----VWFLQFSHDGKYLASSSKD---------QSAIIWEVKEDGQVSL 309 (532)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~-----V~~v~~s~~g~~las~s~d---------g~i~iwd~~~~~~~~~ 309 (532)
++.+.+|+..+ .++...+.+|... ...++|||||++|+.++.+ +.+.+||+.++.
T Consensus 35 ~~~i~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~---- 103 (740)
T 4a5s_A 35 ENNILVFNAEY-------GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ---- 103 (740)
T ss_dssp TTEEEEEETTT-------CCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE----
T ss_pred CCcEEEEECCC-------CceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc----
Confidence 55666665433 3455566766543 2447899999999998876 566799998762
Q ss_pred EEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEe-eccCCce-----------------EEEEEeeCC
Q 009569 310 KHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVY-EKTGVGL-----------------ISCGWFLDG 371 (532)
Q Consensus 310 ~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~i-----------------~~~~~~~~~ 371 (532)
...+..|...+..++|||||+.|+.+. ++.|++|++.+++..+.. .++...+ ..+.|+|||
T Consensus 104 ~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg 182 (740)
T 4a5s_A 104 LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG 182 (740)
T ss_dssp ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS
T ss_pred EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCC
Confidence 234667888899999999999999884 689999999888755422 1222222 348899999
Q ss_pred CeEEEEeCCC------------------------------------cEEEEECCC---C---eEEEeec-----CccCce
Q 009569 372 GGIFAGMTDK------------------------------------SICLWDLDG---R---ELESWKG-----QKTLRI 404 (532)
Q Consensus 372 ~~l~~~~~dg------------------------------------~i~iwd~~~---~---~~~~~~~-----~~~~~v 404 (532)
+.|+.++.|. .|++||+.+ + ....... .+...+
T Consensus 183 ~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (740)
T 4a5s_A 183 TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYL 262 (740)
T ss_dssp SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEE
T ss_pred CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEE
Confidence 9999875321 488899988 6 4444443 144478
Q ss_pred EEEEEeeCCCEEEEEEC----CCeEEEEECCCCc--------eee--eecCCcee-----EEEEcCCCCEEE-EEec-CC
Q 009569 405 SDMAITDDGKRIISICR----EAAILLLDREANF--------ERW--IEEEEVIT-----SFSLSKDNKYLL-VNLI-NQ 463 (532)
Q Consensus 405 ~~~~~s~~~~~l~~~~~----dg~I~iwd~~~~~--------~~~--~~~~~~i~-----~~~~sp~~~~l~-~~~~-dg 463 (532)
..++|+|||+.++.... +..|++||+.++. ..+ ..+...+. .+.|+|||+.|+ ..+. +|
T Consensus 263 ~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G 342 (740)
T 4a5s_A 263 CDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG 342 (740)
T ss_dssp EEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS
T ss_pred EEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC
Confidence 99999999997766543 2379999988764 122 23444443 789999999877 5543 33
Q ss_pred --eEEEEecCCC
Q 009569 464 --EIHLWSIESD 473 (532)
Q Consensus 464 --~i~iwd~~~~ 473 (532)
.|++||+.++
T Consensus 343 ~~~l~~~~~~~~ 354 (740)
T 4a5s_A 343 YRHICYFQIDKK 354 (740)
T ss_dssp CEEEEEEETTCS
T ss_pred ceEEEEEECCCC
Confidence 6888898765
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=1.1e-14 Score=143.26 Aligned_cols=224 Identities=14% Similarity=0.213 Sum_probs=152.9
Q ss_pred ccEEEEEEccCCCEEEEEeCC---Ce--EEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC---------
Q 009569 273 DEVWFLQFSHDGKYLASSSKD---QS--AIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE--------- 338 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~d---g~--i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d--------- 338 (532)
..+..++|||||++||.++.+ +. |.+|++.++ .. ..... +.. +..+.|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g-~~--~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL-SS--KKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT-EE--EEEEE-ESE-EEEEEECTTSSEEEEEEECCCC------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC-ce--EEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 467889999999999987654 34 667777654 22 22222 233 9999999999999888642
Q ss_pred ------------------CcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCC---------cEEEEECCCC
Q 009569 339 ------------------EAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDK---------SICLWDLDGR 391 (532)
Q Consensus 339 ------------------g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---------~i~iwd~~~~ 391 (532)
..|.+||+.+++.+..+.. . .+..+.|+|+| .++++..++ .|.++| ++
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~ 208 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DG 208 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TT
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CC
Confidence 5799999998887455544 3 78899999999 777775542 455556 55
Q ss_pred eEEEeecCccCceEEEEEeeCCCEEEEEECC--------CeEEEEECCCCc-eeee-ecCCceeE-EEEcCCCCEEEEEe
Q 009569 392 ELESWKGQKTLRISDMAITDDGKRIISICRE--------AAILLLDREANF-ERWI-EEEEVITS-FSLSKDNKYLLVNL 460 (532)
Q Consensus 392 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------g~I~iwd~~~~~-~~~~-~~~~~i~~-~~~sp~~~~l~~~~ 460 (532)
....+... ..+..+ +|||+.|+.++.+ ..|.+|| ++. ..+. .+...+.. +.|+ |+ ++++++
T Consensus 209 ~~~~l~~~--~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~ 280 (347)
T 2gop_A 209 KEEKMFEK--VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLF 280 (347)
T ss_dssp EEEEEEEE--ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEE
T ss_pred ceEEeccC--cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEe
Confidence 55554443 345544 9999998887754 4788888 444 3332 34567776 9999 88 888999
Q ss_pred cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcE-EEEeCCCCCcee
Q 009569 461 INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQV-NIFLSFSPFAKK 523 (532)
Q Consensus 461 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i-~iw~~~~~~~~~ 523 (532)
.++.++|| +.++ +. ..+..+... +..+.+ ++ .++++++.++.. .+|.+. +...+
T Consensus 281 ~~~~~~l~-~~~g-~~-~~~~~~~~~--v~~~~~-s~--~~~~~~~~~~~~~~l~~~~-g~~~~ 335 (347)
T 2gop_A 281 EEGSVNLY-IWDG-EI-KPIAKGRHW--IMGFDV-DE--IVVYLKETATRLRELFTWD-GEEKQ 335 (347)
T ss_dssp ETTEEEEE-EESS-SE-EEEECSSSE--EEEEEE-SS--SEEEEEECSSSCCEEEEES-SSEEE
T ss_pred cCCcEEEE-EcCC-ce-EEEecCCCe--EEeeee-eC--cEEEEEcCCCChHHheEeC-CcEEE
Confidence 99999999 8744 44 344444443 333555 77 677777777764 667665 54433
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=9.6e-15 Score=143.69 Aligned_cols=219 Identities=12% Similarity=0.162 Sum_probs=152.4
Q ss_pred ccEEEEEEccCCCEEEEEe---------CCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC---C-
Q 009569 273 DEVWFLQFSHDGKYLASSS---------KDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE---E- 339 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s---------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d---g- 339 (532)
..+..+++ ||++++... .++.|.+|++.++.. . .+ ..+..+.|||||++|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~---~l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR-R---FI----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE-E---EE----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce-E---Ec----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 34667777 888887642 256789999886532 2 22 457899999999999988754 2
Q ss_pred -cEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCC---------------------------CcEEEEECCCC
Q 009569 340 -AIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTD---------------------------KSICLWDLDGR 391 (532)
Q Consensus 340 -~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------------------------g~i~iwd~~~~ 391 (532)
.|.+||+.+++.......+ . +..+.|+|||+.|+.++.+ ..|++||+.++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred ceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 4888899888766555433 3 8999999999998887642 57999999887
Q ss_pred eE-EEeecCccCceEEEEEeeCCCEEEEEECCC---------eEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEe
Q 009569 392 EL-ESWKGQKTLRISDMAITDDGKRIISICREA---------AILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNL 460 (532)
Q Consensus 392 ~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---------~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~ 460 (532)
.. ..+.. . .+..++|+||| +++++..++ .|.++| ++. ..+..+ ..+..+ +|||++|+.++
T Consensus 163 ~~~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 163 EVIEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VSFYAV--DSDGERILLYG 233 (347)
T ss_dssp EEEEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ESEEEE--EECSSCEEEEE
T ss_pred eEEeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC-cceeeE--CCCCCEEEEEE
Confidence 76 55444 2 68899999999 777775542 455566 444 344444 444444 99999888776
Q ss_pred cC--------CeEEEEecCCCCcceeEEeccccceEEEE-EccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 461 IN--------QEIHLWSIESDPKLVSRYKGHKRARFVIR-SCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 461 ~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~i~-~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
.+ ..|++|| ++ +.......+...+ .. ..| + |+ ++++++.++.+++| +.++..
T Consensus 234 ~~~~~~~~~~~~l~~~d--~~-~~~~l~~~~~~~~--~~~~~~-s-dg-~~~~~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 234 KPEKKYMSEHNKLYIYD--GK-EVMGILDEVDRGV--GQAKIK-D-GK-VYFTLFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp CCSSSCCCSSCEEEEEC--SS-CEEESSTTCCSEE--EEEEEE-T-TE-EEEEEEETTEEEEE-EESSSE
T ss_pred ccccCCccccceEEEEC--CC-ceEeccccCCccc--CCccEE-c-Cc-EEEEEecCCcEEEE-EcCCce
Confidence 44 3688888 44 3333333443332 22 455 7 88 89999999999999 875543
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=1.6e-14 Score=136.64 Aligned_cols=239 Identities=7% Similarity=-0.053 Sum_probs=167.2
Q ss_pred cEEEEEEccCCCEEE-EEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEE
Q 009569 274 EVWFLQFSHDGKYLA-SSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECL 352 (532)
Q Consensus 274 ~V~~v~~s~~g~~la-s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 352 (532)
...+++++++|++++ +.+.++.|.+|+..+.. .......+...+.+++++++++++++.. ++.|.+||..+....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG---TTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC--------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc---cceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 678999999999777 55778999999876431 1111123335678899999998666655 889999998765443
Q ss_pred EEee-ccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECC
Q 009569 353 HVYE-KTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDRE 431 (532)
Q Consensus 353 ~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~ 431 (532)
.+. .....+..+++.++|+.+++...++.|.+|+..+.............+.+++++++|+++++...++.|.+||..
T Consensus 101 -~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 101 -VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp -ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred -eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 332 233568899999999877777778899999876543322222222367899999999977776678899999988
Q ss_pred CCceee--eecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCC
Q 009569 432 ANFERW--IEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDS 509 (532)
Q Consensus 432 ~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg 509 (532)
+..... ......+.+++++++|.++++...++.|.+||..+. ........+... ...+++ +++|+++++...++
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~--p~~i~~-~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST-TSTVLPFTGLNT--PLAVAV-DSDRTVYVADRGND 255 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS-CCEECCCCSCSC--EEEEEE-CTTCCEEEEEGGGT
T ss_pred CCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC-cceeeccCCCCC--ceeEEE-CCCCCEEEEECCCC
Confidence 766222 222356889999999977777777889999998765 322211122122 233555 88999888888999
Q ss_pred cEEEEeCCCCCc
Q 009569 510 QVNIFLSFSPFA 521 (532)
Q Consensus 510 ~i~iw~~~~~~~ 521 (532)
+|++++....+.
T Consensus 256 ~v~~~~~~~~~~ 267 (270)
T 1rwi_B 256 RVVKLTSLEHHH 267 (270)
T ss_dssp EEEEECCCGGGS
T ss_pred EEEEEcCCCccc
Confidence 999999887543
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.64 E-value=1.5e-13 Score=130.60 Aligned_cols=214 Identities=11% Similarity=0.074 Sum_probs=164.2
Q ss_pred CCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCC-CCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeecc-CC
Q 009569 283 DGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHR-KPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKT-GV 360 (532)
Q Consensus 283 ~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~ 360 (532)
.+++|++++.|+.|.+||.+++ +.+..+..+. ..+.++.++|+|++++ +.++.|..||. +++.+..+..+ ..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG---~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK---EIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT---EEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTC
T ss_pred CCcEEEeeCCCCEEEEEECCCC---eEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCc
Confidence 4678999999999999999776 4556666665 4688999999999888 45778999999 89999988865 35
Q ss_pred ceEEEEEeeCCCeEEEEeC-CCcEEEEECCCCeEEEeecC-----ccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc
Q 009569 361 GLISCGWFLDGGGIFAGMT-DKSICLWDLDGRELESWKGQ-----KTLRISDMAITDDGKRIISICREAAILLLDREANF 434 (532)
Q Consensus 361 ~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~ 434 (532)
.+.++.+.++|+.+++.+. ++.|..+|.+++.+..+... +......+++.++|+++++...++.|..||.. ++
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 7888999999999999887 78888889877666555421 11245567889999999999999999999998 55
Q ss_pred -eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEecccc----ceEEEEEccCCCCCcEEEEE
Q 009569 435 -ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKR----ARFVIRSCFGGFEQAFIASG 505 (532)
Q Consensus 435 -~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~~~i~~~~~s~d~~~l~sg 505 (532)
.........+.++.+.+++++++++..++.|..+|..++ +.+.++..+.. ......... .++|.++++.
T Consensus 157 ~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG-~~~w~~~~~~~~~~~l~~~~~~~~-~~~G~i~v~~ 230 (276)
T 3no2_A 157 LLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESN-RIVRRVNANDIEGVQLFFVAQLFP-LQNGGLYICN 230 (276)
T ss_dssp EEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTC-CEEEEEEGGGSBSCCCSEEEEEEE-CTTSCEEEEE
T ss_pred EEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCC-cEEEEecCCCCCCccccccccceE-cCCCCEEEEe
Confidence 333333456777888999999999888889999999887 78888764321 112222333 5778777766
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.61 E-value=2.4e-12 Score=123.35 Aligned_cols=241 Identities=13% Similarity=0.093 Sum_probs=171.4
Q ss_pred cccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECC
Q 009569 268 LEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVN 347 (532)
Q Consensus 268 l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 347 (532)
+..+...+.+++++++|++.++...++.|.+||.. + .+.. .....+...+.++++++++..+++...++.|..||..
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~-~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-G-KITE-YPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C-CEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C-CeEE-ecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 34456789999999999988877668899999987 3 3222 2223355779999999999988887778899999986
Q ss_pred CCcEEEEee--ccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEee-cCccCceEEEEEeeCCCEEEEEECCCe
Q 009569 348 SGECLHVYE--KTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWK-GQKTLRISDMAITDDGKRIISICREAA 424 (532)
Q Consensus 348 ~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~ 424 (532)
++. ..+. .....+.++++.+++..+++...++.|..||.. +....+. ......+..++++++|+.+++...++.
T Consensus 87 -g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 87 -GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKIREYELPNKGSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp -SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred -CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence 443 2332 245568899999999887777778899999994 4443332 223346899999999988777767789
Q ss_pred EEEEECCCCc-eee--eecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcE
Q 009569 425 ILLLDREANF-ERW--IEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAF 501 (532)
Q Consensus 425 I~iwd~~~~~-~~~--~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~ 501 (532)
|..||. ++. ... ......+.++++++++++.++...++.|.+||. ++ . +..+...........+++ +++|.+
T Consensus 164 i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g-~-~~~~~~~~~~~~~~~i~~-~~~g~l 238 (299)
T 2z2n_A 164 IGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG-E-ITEFKIPTPNARPHAITA-GAGIDL 238 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC-C-EEEEECSSTTCCEEEEEE-CSTTCE
T ss_pred EEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC-c-EEEEECCCCCCCceeEEE-CCCCCE
Confidence 999999 555 222 123456889999999997777666889999998 55 3 233322211112234555 888887
Q ss_pred EEEEeCCCcEEEEeCCCCC
Q 009569 502 IASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 502 l~sgs~dg~i~iw~~~~~~ 520 (532)
.++...++.|..|+. ++.
T Consensus 239 ~v~~~~~~~i~~~d~-~g~ 256 (299)
T 2z2n_A 239 WFTEWGANKIGRLTS-NNI 256 (299)
T ss_dssp EEEETTTTEEEEEET-TTE
T ss_pred EEeccCCceEEEECC-CCc
Confidence 776667889999998 443
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.61 E-value=2.7e-13 Score=132.49 Aligned_cols=233 Identities=9% Similarity=-0.016 Sum_probs=161.1
Q ss_pred ccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEE
Q 009569 273 DEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECL 352 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 352 (532)
.....+.+. +++..++...++.|.+||..++.. +..+. .......++++++++..++...++.|.+||..+++..
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~---~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKE---VGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCE---EEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEE---EEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEE
Confidence 345677774 455556666789999999987643 34443 3466889999998854444448899999999999887
Q ss_pred EEeeccC-----CceEEEEEeeCCCeEEEEe--CCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECC---
Q 009569 353 HVYEKTG-----VGLISCGWFLDGGGIFAGM--TDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICRE--- 422 (532)
Q Consensus 353 ~~~~~~~-----~~i~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--- 422 (532)
..+.... .....+++ . +..++++. .++.|.+||+.+..+........ ....++++|+|++++++..+
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~ 195 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEG 195 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTT
T ss_pred EEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccC
Confidence 7766433 14556777 3 44555554 48899999999877654443322 56789999999877766554
Q ss_pred -------CeEEEEECCCCc-eeeeec--CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCccee-E-EeccccceEEE
Q 009569 423 -------AAILLLDREANF-ERWIEE--EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVS-R-YKGHKRARFVI 490 (532)
Q Consensus 423 -------g~I~iwd~~~~~-~~~~~~--~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~-~-~~~~~~~~~~i 490 (532)
+.|.+||..+.+ ...... ......++|+|++++|+++.. .|.+||..++ +... . +....... .
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~-~~~~~~~~~~~~~~p--~ 270 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEAD-RVPVRPFLEFRDTKY--Y 270 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCS-SCCSSCSBCCCSSCE--E
T ss_pred CccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCC-ceeeeeeecCCCCce--E
Confidence 789999998887 222222 346899999999999988765 8999999876 4322 1 11111222 2
Q ss_pred EEccCCC-CCcEEEEE----eCCCcEEEEeCCCCC
Q 009569 491 RSCFGGF-EQAFIASG----SEDSQVNIFLSFSPF 520 (532)
Q Consensus 491 ~~~~~s~-d~~~l~sg----s~dg~i~iw~~~~~~ 520 (532)
.+++ +| ++.+.++. ..++.|.+||.. ++
T Consensus 271 gi~v-dp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 271 GLTV-NPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp EEEE-CTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred EEEE-cCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 3445 77 56666665 578999999998 54
No 185
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.58 E-value=1.3e-13 Score=150.16 Aligned_cols=244 Identities=11% Similarity=0.073 Sum_probs=161.9
Q ss_pred cccccEEEEEEccCCCEEEEEeCC-----CeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCc----
Q 009569 270 AHSDEVWFLQFSHDGKYLASSSKD-----QSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEA---- 340 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~s~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~---- 340 (532)
+|...+..++|||||++||.++.+ ..|++||+.++..... .+ +...+..++|+|| +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~--~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD--EL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE--EE--EEEESCCCEESTT-SEEEEEECCCC----
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc--cC--CCceeccEEEECC-CEEEEEEecCccccc
Confidence 344578899999999999987543 4699999987643221 11 1112357899999 99988887654
Q ss_pred ----------EEEEECCCCcE--EEEeecc--CCceEEEEEeeCCCeEEEEeCCC-----cEEEEECCCC--e-EEEeec
Q 009569 341 ----------IRRWDVNSGEC--LHVYEKT--GVGLISCGWFLDGGGIFAGMTDK-----SICLWDLDGR--E-LESWKG 398 (532)
Q Consensus 341 ----------i~iwd~~~~~~--~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~-~~~~~~ 398 (532)
|++|++.++.. ...+... ...+..+.|+|||++++..+.++ .|++||+.++ . ...+..
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC
T ss_pred ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC
Confidence 89999987752 2333332 23588999999999988877543 8999999776 4 455554
Q ss_pred CccCceEEEEEeeCCCEEEEEECC----CeEEEEECCCC--c-eeeee-cCCceeEEEEcCCCCEEEEEecCCeEEEEec
Q 009569 399 QKTLRISDMAITDDGKRIISICRE----AAILLLDREAN--F-ERWIE-EEEVITSFSLSKDNKYLLVNLINQEIHLWSI 470 (532)
Q Consensus 399 ~~~~~v~~~~~s~~~~~l~~~~~d----g~I~iwd~~~~--~-~~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~ 470 (532)
... .+... ++|+|+.|+..+.+ +.|.+||+.+. . ..+.. +...+..++++ ++.++++...|+..+||.+
T Consensus 315 ~~~-~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 315 DLK-AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp SSS-SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred CCC-ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 443 34444 35899988888764 45999999874 3 33333 34456678887 6677888888998777765
Q ss_pred CCCCcceeEEeccccceEEEEEccCCCCCcEEE-E---EeCCCcEEEEeCCCCCcee
Q 009569 471 ESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIA-S---GSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~-s---gs~dg~i~iw~~~~~~~~~ 523 (532)
...+.....+..+.. ..+..+.+ ++++..|+ + ....+.|+.||+.+++...
T Consensus 392 ~~~g~~~~~l~~~~~-~~v~~~~~-s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~ 446 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGI-GSASGLSG-RPGDRHAYLSFSSFTQPATVLALDPATAKTTP 446 (741)
T ss_dssp ETTSCEEEECBCSSS-CEEEEEEC-CBTCSCEEEEEEETTEEEEEEEEETTTTEEEE
T ss_pred eCCCCceeeccCCCC-eEEEEeec-CCCCCEEEEEEcCCCCCCEEEEEECCCCcEEE
Confidence 422245555554322 22333445 78887655 2 2345789999999876443
No 186
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.58 E-value=5.9e-13 Score=127.15 Aligned_cols=202 Identities=10% Similarity=0.191 Sum_probs=148.4
Q ss_pred cCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeec------cCCceEEEEEe-eCCCeEEEEeC-CCcEEEE
Q 009569 315 GHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEK------TGVGLISCGWF-LDGGGIFAGMT-DKSICLW 386 (532)
Q Consensus 315 ~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~i~~~~~~-~~~~~l~~~~~-dg~i~iw 386 (532)
++-..+.+++++++++++++...++.|.+||.. ++.+..+.. +...+..+++. ++++.+++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455678999999999988888889999999987 666666542 23467899995 56666555543 8899999
Q ss_pred ECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCceeee---ecCCceeEEEEcCCCCEEEEEecCC
Q 009569 387 DLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANFERWI---EEEEVITSFSLSKDNKYLLVNLINQ 463 (532)
Q Consensus 387 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~~~~~---~~~~~i~~~~~sp~~~~l~~~~~dg 463 (532)
|..+..+..+.......+.+++++|+|+++++...++.|.+||......... .+...+.+++++|+++++++...++
T Consensus 106 d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 185 (286)
T 1q7f_A 106 NQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAH 185 (286)
T ss_dssp CTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred CCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCC
Confidence 9766665555444444789999999999888777889999999765443333 2335689999999999888878899
Q ss_pred eEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCC-cEEEEeCCCCC
Q 009569 464 EIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDS-QVNIFLSFSPF 520 (532)
Q Consensus 464 ~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg-~i~iw~~~~~~ 520 (532)
.|++||... ..+..+..+........+++ +++|+++++...++ .|.+|+.....
T Consensus 186 ~i~~~~~~g--~~~~~~~~~g~~~~p~~i~~-d~~G~l~v~~~~~~~~i~~~~~~g~~ 240 (286)
T 1q7f_A 186 CVKVFNYEG--QYLRQIGGEGITNYPIGVGI-NSNGEILIADNHNNFNLTIFTQDGQL 240 (286)
T ss_dssp EEEEEETTC--CEEEEESCTTTSCSEEEEEE-CTTCCEEEEECSSSCEEEEECTTSCE
T ss_pred EEEEEcCCC--CEEEEEccCCccCCCcEEEE-CCCCCEEEEeCCCCEEEEEECCCCCE
Confidence 999999744 45666654321111234555 88999888888776 99999976543
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.57 E-value=7.8e-12 Score=130.52 Aligned_cols=271 Identities=10% Similarity=0.030 Sum_probs=180.0
Q ss_pred ccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEee--cCCeeEEEEEeecCC
Q 009569 240 HNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVK--EDGQVSLKHRLSGHR 317 (532)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~--~~~~~~~~~~~~~h~ 317 (532)
....++.+.+++..+ .+.+..+.. ...+..+.|+|||+++++++.|+.|.+||+. +. +....+....
T Consensus 172 ~~~~~~~V~viD~~t-------~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~---~~v~~i~~G~ 240 (567)
T 1qks_A 172 TLRDAGQIALIDGST-------YEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP---TTVAEIKIGS 240 (567)
T ss_dssp EETTTTEEEEEETTT-------CCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC---CEEEEEECCS
T ss_pred EeCCCCeEEEEECCC-------CeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC---cEeEEEecCC
Confidence 334455666665443 345555543 2356799999999999999999999999995 44 3344554433
Q ss_pred CCeEEEEeC----CCCCEEEEeeC-CCcEEEEECCCCcEEEEeeccC---------------------------------
Q 009569 318 KPVFTVSWS----PNDHQLLTCGQ-EEAIRRWDVNSGECLHVYEKTG--------------------------------- 359 (532)
Q Consensus 318 ~~v~~l~~s----~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~--------------------------------- 359 (532)
....++|+ |||+++++++. +++|.++|..+.+.+..+....
T Consensus 241 -~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 241 -EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp -EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred -CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 35789999 69998888776 5899999998888776553110
Q ss_pred ----------------------CceEEEEEeeCCCeEEEEe-CCCcEEEEECCCCeEEEeecC-cc--CceEEEE-EeeC
Q 009569 360 ----------------------VGLISCGWFLDGGGIFAGM-TDKSICLWDLDGRELESWKGQ-KT--LRISDMA-ITDD 412 (532)
Q Consensus 360 ----------------------~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-~~--~~v~~~~-~s~~ 412 (532)
.....+.|+|++++++++. .++.|.++|+.++++...... .. .+-.... ++|+
T Consensus 320 g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~ 399 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPT 399 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETT
T ss_pred CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCC
Confidence 0122457899999987765 578999999998776544332 11 0111222 5787
Q ss_pred CCEEE-EEE-CCCeEEEEECCC-------Cc-eeeee-cCCceeEEEEcCCCCEEEEEec-------CCeEEEEecCCC-
Q 009569 413 GKRII-SIC-REAAILLLDREA-------NF-ERWIE-EEEVITSFSLSKDNKYLLVNLI-------NQEIHLWSIESD- 473 (532)
Q Consensus 413 ~~~l~-~~~-~dg~I~iwd~~~-------~~-~~~~~-~~~~i~~~~~sp~~~~l~~~~~-------dg~i~iwd~~~~- 473 (532)
+..+. ++. .++.|.++|..+ .+ ...+. ....-..+..+|+++++++... .++|.++|+.+.
T Consensus 400 ~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 479 (567)
T 1qks_A 400 FGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMT 479 (567)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCC
T ss_pred CCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCccc
Confidence 55554 443 468999999987 33 22222 2233345789999999999763 358999999865
Q ss_pred ----CcceeEEec-----c-ccceEEEEEccCCCCCcEEEEEe-----CCCcEEEEeCCCCCcee
Q 009569 474 ----PKLVSRYKG-----H-KRARFVIRSCFGGFEQAFIASGS-----EDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 474 ----~~~~~~~~~-----~-~~~~~~i~~~~~s~d~~~l~sgs-----~dg~i~iw~~~~~~~~~ 523 (532)
...+..+.. . .....+....| +++|+++..+. .++.|.|+|..+.++..
T Consensus 480 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 480 GDGSDPEFKTLPIAEWAGITEGQPRVVQGEF-NKDGTEVWFSVWNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp CSSSCCCEEEECHHHHHTCCSSCCEEEEEEE-CTTSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred ccccCCCcEEeccccccccCCCCcceEeeeE-CCCCCEEEEEeecCCCCCCcEEEEECCCceEEE
Confidence 222233321 0 12334566777 99999887663 37999999999987644
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.57 E-value=5.2e-13 Score=130.55 Aligned_cols=201 Identities=11% Similarity=0.071 Sum_probs=147.5
Q ss_pred cccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEe---------ecCCCCeEEEEeCC-CCCEEEEee-CC
Q 009569 270 AHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRL---------SGHRKPVFTVSWSP-NDHQLLTCG-QE 338 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~---------~~h~~~v~~l~~s~-~~~~l~s~~-~d 338 (532)
++-..+..++++|+|+++++...++.|++|+..... ..+..+ .++-.....++++| ++.++++.+ .+
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~--~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~ 165 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE--GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN 165 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS--CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe--EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC
Confidence 455678999999999988888889999999976321 122333 24455789999999 788888876 68
Q ss_pred CcEEEEECCCCcEEEEeeccC----------CceEEEEEeeC-CCeEEEEeCCCcEEEEECCCCe-EEEeec-CccCceE
Q 009569 339 EAIRRWDVNSGECLHVYEKTG----------VGLISCGWFLD-GGGIFAGMTDKSICLWDLDGRE-LESWKG-QKTLRIS 405 (532)
Q Consensus 339 g~i~iwd~~~~~~~~~~~~~~----------~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~-~~~~~~-~~~~~v~ 405 (532)
+.|++|| .+++.+..+.... ..+..++++|+ +..+++...++.|++||..++. +..+.. .....+.
T Consensus 166 ~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~ 244 (329)
T 3fvz_A 166 SRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVF 244 (329)
T ss_dssp CEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEE
T ss_pred CeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcc
Confidence 9999999 5677777765332 23789999998 6777777788999999998444 444322 2334688
Q ss_pred EEEEee------CCCEEEEEECCCeEEEEECCCCc-eeee----ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 406 DMAITD------DGKRIISICREAAILLLDREANF-ERWI----EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 406 ~~~~s~------~~~~l~~~~~dg~I~iwd~~~~~-~~~~----~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
+++++| +|+..++...+..|++||..++. .... .+...+..++++|+|.++++...++.|++|++...
T Consensus 245 ~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 245 AISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred eeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 999999 33322223344589999998887 3332 35566899999999988888888999999998653
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.57 E-value=2.9e-12 Score=123.89 Aligned_cols=240 Identities=11% Similarity=0.092 Sum_probs=165.0
Q ss_pred ccccEEEEEEccCCCEEEE-------EeCCCeEEEEEeecCCeeEEEEE--eecCCCCeEEEEeCCC-CCEEEEeeCCCc
Q 009569 271 HSDEVWFLQFSHDGKYLAS-------SSKDQSAIIWEVKEDGQVSLKHR--LSGHRKPVFTVSWSPN-DHQLLTCGQEEA 340 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~las-------~s~dg~i~iwd~~~~~~~~~~~~--~~~h~~~v~~l~~s~~-~~~l~s~~~dg~ 340 (532)
.-....+++|+++|.++++ +..++.|.+||..++. ...... ..++...+.+++++++ ++++++ +..+.
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~ 93 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK-KTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLG 93 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC-EEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCc-EEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCC
Confidence 3445679999999988888 6778999999976553 221111 0124467899999999 665554 44457
Q ss_pred EEEEECCCCcEEEE-eec----cCCceEEEEEeeCCCeEEEEeCC---------------CcEEEEECCCCeEEEeecCc
Q 009569 341 IRRWDVNSGECLHV-YEK----TGVGLISCGWFLDGGGIFAGMTD---------------KSICLWDLDGRELESWKGQK 400 (532)
Q Consensus 341 i~iwd~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~~ 400 (532)
|.+||.. ++.... ... ....+.++++.++|+.+++...+ +.|..||.. +.........
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~ 171 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF 171 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC
Confidence 9999998 765433 221 12347899999999887776654 578888876 4443333222
Q ss_pred cCceEEEEEe----eCCCEEEEE-ECCCeEEEEECC-CCc----eeee---ecC-CceeEEEEcCCCCEEEEEecCCeEE
Q 009569 401 TLRISDMAIT----DDGKRIISI-CREAAILLLDRE-ANF----ERWI---EEE-EVITSFSLSKDNKYLLVNLINQEIH 466 (532)
Q Consensus 401 ~~~v~~~~~s----~~~~~l~~~-~~dg~I~iwd~~-~~~----~~~~---~~~-~~i~~~~~sp~~~~l~~~~~dg~i~ 466 (532)
.....++++ |+++.++++ ..++.|.+||.. ++. ..+. .+. ..+..++++++|+++++...++.|.
T Consensus 172 -~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 172 -QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp -SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred -CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 257889999 999766555 467899999976 332 1111 122 5678899999999888877789999
Q ss_pred EEecCCCCcceeEEeccccceEEEEEccCCCCCcEEE-EEeCCCcEEEEeCCCC
Q 009569 467 LWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIA-SGSEDSQVNIFLSFSP 519 (532)
Q Consensus 467 iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~-sgs~dg~i~iw~~~~~ 519 (532)
+||..++ +.+..+..+... ...++| +++++.|+ +...++.|..|++...
T Consensus 251 ~~d~~~g-~~~~~~~~~~~~--~~~i~~-~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 251 VFGPDGG-QPKMRIRCPFEK--PSNLHF-KPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EECTTCB-SCSEEEECSSSC--EEEEEE-CTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEcCCCC-cEeEEEeCCCCC--ceeEEE-CCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 9998866 566666655443 344566 89999554 4455789999998764
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.56 E-value=9e-13 Score=142.83 Aligned_cols=202 Identities=9% Similarity=0.055 Sum_probs=143.1
Q ss_pred CCCCeEEEEeCCCCCEEEEeeCCC-----cEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCc--------
Q 009569 316 HRKPVFTVSWSPNDHQLLTCGQEE-----AIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKS-------- 382 (532)
Q Consensus 316 h~~~v~~l~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-------- 382 (532)
|...+..++|||||++|+.++.++ .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 444688999999999998776543 8999999999876543222 22667999999999999887765
Q ss_pred --------EEEEECCCCe---EEEeec-CccCceEEEEEeeCCCEEEEEEC-----CCeEEEEECCC------C--c-ee
Q 009569 383 --------ICLWDLDGRE---LESWKG-QKTLRISDMAITDDGKRIISICR-----EAAILLLDREA------N--F-ER 436 (532)
Q Consensus 383 --------i~iwd~~~~~---~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~-----dg~I~iwd~~~------~--~-~~ 436 (532)
|++|++.+.. ...... .+...+..+.|+|||++|+.++. +..|++||+.+ + . ..
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 9999997654 222222 22335789999999999988764 67899999986 4 2 44
Q ss_pred eeecCCceeEEEEcCCCCEEEEEecC----CeEEEEecCCCCc-ceeEEeccccceEEEEEccCCCCCcEEEEEeCCCc-
Q 009569 437 WIEEEEVITSFSLSKDNKYLLVNLIN----QEIHLWSIESDPK-LVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQ- 510 (532)
Q Consensus 437 ~~~~~~~i~~~~~sp~~~~l~~~~~d----g~i~iwd~~~~~~-~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~- 510 (532)
+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++.. ....+..+.....+..+.+ ++++.++++...|+.
T Consensus 282 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~lv~~~~~~g~~ 359 (710)
T 2xdw_A 282 LIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVAC-VRSNFLVLCYLHDVKN 359 (710)
T ss_dssp EECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEE-ETTTEEEEEEEETTEE
T ss_pred eeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEE-EcCCEEEEEEEECCEE
Confidence 5555555544 588999888776653 3699999987621 2455655544222333555 567888889988885
Q ss_pred -EEEEeCCCCC
Q 009569 511 -VNIFLSFSPF 520 (532)
Q Consensus 511 -i~iw~~~~~~ 520 (532)
|++|++.++.
T Consensus 360 ~l~~~~~~~g~ 370 (710)
T 2xdw_A 360 TLQLHDLATGA 370 (710)
T ss_dssp EEEEEETTTCC
T ss_pred EEEEEECCCCC
Confidence 6677875664
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.55 E-value=4.7e-12 Score=132.18 Aligned_cols=230 Identities=13% Similarity=0.096 Sum_probs=165.5
Q ss_pred cCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECC--CCcEEEEeeccC
Q 009569 282 HDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVN--SGECLHVYEKTG 359 (532)
Q Consensus 282 ~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~ 359 (532)
|.+.++++...+++|.++|..++. .+..+.. ...+..+.|+|||+++++++.|+.|.+||+. +++.+..+.. .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~---v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G 239 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYE---IKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-G 239 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCC---EEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-C
T ss_pred CCceEEEEeCCCCeEEEEECCCCe---EEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-C
Confidence 445567778889999999998763 3444443 3356799999999999999999999999996 8888877765 3
Q ss_pred CceEEEEEe----eCCCeEEEEe-CCCcEEEEECCCCeEEEeecC-----------ccCceEEEEEeeCCCEEE-EEECC
Q 009569 360 VGLISCGWF----LDGGGIFAGM-TDKSICLWDLDGRELESWKGQ-----------KTLRISDMAITDDGKRII-SICRE 422 (532)
Q Consensus 360 ~~i~~~~~~----~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-----------~~~~v~~~~~s~~~~~l~-~~~~d 422 (532)
.....++|+ |||+++++++ .++.+.++|..+.+....... ....+..+..++++..++ ....+
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 456789999 6999988876 458999999987655443221 122678888998876544 44567
Q ss_pred CeEEEEECCCCc---eeeeecCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEec-cccce--EEEEEccC
Q 009569 423 AAILLLDREANF---ERWIEEEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKG-HKRAR--FVIRSCFG 495 (532)
Q Consensus 423 g~I~iwd~~~~~---~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~-~~~~~--~~i~~~~~ 495 (532)
|.|.++|..+.. ...+........+.|+|+++++++++ .++.|.++|+.++ +.+..+.. ...+. .... |+
T Consensus 320 g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~-kl~~~i~vgg~~Phpg~g~~--~~ 396 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG-KLVAIEDTGGQTPHPGRGAN--FV 396 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSSBCCTTCEE--EE
T ss_pred CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC-cEEEEEeccCcCCCCcccee--eE
Confidence 999999988754 33344455677899999999987765 5789999999988 77666654 11110 0122 23
Q ss_pred CCCCcEE-EEEe-CCCcEEEEeCCCC
Q 009569 496 GFEQAFI-ASGS-EDSQVNIFLSFSP 519 (532)
Q Consensus 496 s~d~~~l-~sgs-~dg~i~iw~~~~~ 519 (532)
+|++..+ +++. .++.|.+++..++
T Consensus 397 ~p~~g~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 397 HPTFGPVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred CCCCCcEEEeCCCCCCeEEEecCCCC
Confidence 7775444 4443 4689999999873
No 192
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.55 E-value=4.7e-12 Score=127.41 Aligned_cols=236 Identities=10% Similarity=0.080 Sum_probs=161.5
Q ss_pred ccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCC--cEEEEECCCCc
Q 009569 273 DEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEE--AIRRWDVNSGE 350 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg--~i~iwd~~~~~ 350 (532)
...+.++|+++|+++++...++.|++||..++ .+ ...... ..... ++|+|+++.|+++..++ .|.+|+..++.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g-~~--~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN-KV--TTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTT-EE--EEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCC-EE--EEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 46889999999998888888899999999754 22 222222 22333 99999999998888866 79999987665
Q ss_pred EEEEe----eccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEe----ecCccCce--EEEEEeeC-CCEEEEE
Q 009569 351 CLHVY----EKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESW----KGQKTLRI--SDMAITDD-GKRIISI 419 (532)
Q Consensus 351 ~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~v--~~~~~s~~-~~~l~~~ 419 (532)
....+ ......+.+++++|++..|+++..++.|+.||..++....+ .......- ..++|+|+ +.++++-
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 44444 22445678899999555666677788999999987655444 22221122 39999995 5555555
Q ss_pred ECCCeEEEEECCCCceeeeecC---------------CceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEecc
Q 009569 420 CREAAILLLDREANFERWIEEE---------------EVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKGH 483 (532)
Q Consensus 420 ~~dg~I~iwd~~~~~~~~~~~~---------------~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~ 483 (532)
..++.|+.||.......+.++. .....++++|+|+++++-. .++.|+.||+.++ .+.++.++
T Consensus 286 ~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G--~v~~~~g~ 363 (409)
T 3hrp_A 286 QNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG--YVSTVAGQ 363 (409)
T ss_dssp TTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT--EEEEEEEC
T ss_pred CCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC--EEEEEeCC
Confidence 5788999999876543333332 3478999999999777777 7889999998766 34555544
Q ss_pred cc-------------ceEEEEEccCCCCCcEEEEEeCCCcEEEEeC
Q 009569 484 KR-------------ARFVIRSCFGGFEQAFIASGSEDSQVNIFLS 516 (532)
Q Consensus 484 ~~-------------~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~ 516 (532)
.. -.....+++ ++++.++++-..+++|+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giav-d~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICY-DGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEE-CSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEE-cCCCCEEEEECCCCeEEEEEe
Confidence 10 011233444 677777777667777776654
No 193
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.54 E-value=2.7e-11 Score=120.14 Aligned_cols=247 Identities=10% Similarity=-0.029 Sum_probs=166.3
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEe----------CCCeEEEEEeecCCeeEEEEEeecC-------CCCeEEEE
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSS----------KDQSAIIWEVKEDGQVSLKHRLSGH-------RKPVFTVS 324 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s----------~dg~i~iwd~~~~~~~~~~~~~~~h-------~~~v~~l~ 324 (532)
.+.+..+.....+ .++++|||++++++. .++.|.+||..+.... ..+... ......+.
T Consensus 57 ~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~---~~i~~~~~~~~~~g~~p~~~~ 131 (373)
T 2mad_H 57 GSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPI---ADIELPDAPRFDVGPYSWMNA 131 (373)
T ss_pred CeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEE---EEEECCCccccccCCCccceE
Confidence 3445555544444 899999999998875 3678999999765332 222211 12345789
Q ss_pred eCCCCCEEEEeeC--CCcEEEEECCCCcEEEE-eeccCCceEEEEEeeCC-CeEEEEeCCCcEEEEECCCCeEEEee---
Q 009569 325 WSPNDHQLLTCGQ--EEAIRRWDVNSGECLHV-YEKTGVGLISCGWFLDG-GGIFAGMTDKSICLWDLDGRELESWK--- 397 (532)
Q Consensus 325 ~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--- 397 (532)
|+|||++|++++. ++.|.++| .+++.+.. +.... ++.+.|++ +.+++.+.||.+.++|. ++......
T Consensus 132 ~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~ 205 (373)
T 2mad_H 132 NTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVG 205 (373)
T ss_pred ECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecc
Confidence 9999999998875 47899999 99988877 54322 24455654 45566778999999999 55443211
Q ss_pred ---cCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCceee---ee-----------cCCceeEEEEcCCCCEEEEEe
Q 009569 398 ---GQKTLRISDMAITDDGKRIISICREAAILLLDREANFERW---IE-----------EEEVITSFSLSKDNKYLLVNL 460 (532)
Q Consensus 398 ---~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~~~~---~~-----------~~~~i~~~~~sp~~~~l~~~~ 460 (532)
.....-.....+.+++..++..+..+.+.+.|+.+..... .. .......+.++|+++.+++..
T Consensus 206 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~ 285 (373)
T 2mad_H 206 AMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLT 285 (373)
T ss_pred ccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEe
Confidence 1111112335677777666666678899999997653111 10 012234478999999888865
Q ss_pred c----------CCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCc-EEEEEe-CCCcEEEEeCCCCCceee
Q 009569 461 I----------NQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQA-FIASGS-EDSQVNIFLSFSPFAKKI 524 (532)
Q Consensus 461 ~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~-~l~sgs-~dg~i~iw~~~~~~~~~~ 524 (532)
. .+.|.++|+.+. +.+.++.....+ ..+.| +|||+ +++++. .++.|.+||..+++....
T Consensus 286 ~~~~~~~~~~~~~~V~VID~~t~-~vv~~i~~g~~p---~~i~~-s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 286 SEQSAWKLHAAAKEVTSVTGLVG-QTSSQISLGHDV---DAISV-AQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred ccCCcccccCCCCeEEEEECCCC-EEEEEEECCCCc---CeEEE-CCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 3 357999999988 788888654432 33555 99999 777777 589999999999876543
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.53 E-value=4.5e-13 Score=144.79 Aligned_cols=232 Identities=10% Similarity=0.055 Sum_probs=151.0
Q ss_pred cCCCEEEEEeCCC---eEEEEEeec-CCeeEEEEEe----ecCCCCeEEEEeCCCCCEEE-----EeeCCCcEEEEECCC
Q 009569 282 HDGKYLASSSKDQ---SAIIWEVKE-DGQVSLKHRL----SGHRKPVFTVSWSPNDHQLL-----TCGQEEAIRRWDVNS 348 (532)
Q Consensus 282 ~~g~~las~s~dg---~i~iwd~~~-~~~~~~~~~~----~~h~~~v~~l~~s~~~~~l~-----s~~~dg~i~iwd~~~ 348 (532)
|+|++++....++ .-.+|.... ++....+... .+|...+..++|||||++|+ .|+.+..|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 6777777665443 345565542 2222222211 24555789999999999998 444457899999999
Q ss_pred CcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCc-------------EEEEECCCCe----EEEeecCccCceEEEEEee
Q 009569 349 GECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKS-------------ICLWDLDGRE----LESWKGQKTLRISDMAITD 411 (532)
Q Consensus 349 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-------------i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~ 411 (532)
++.+..-.........++|+|||+.|+.++.|.. |++|++.+.. +......+...+..+.|+|
T Consensus 157 g~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp 236 (695)
T 2bkl_A 157 GEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR 236 (695)
T ss_dssp CCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT
T ss_pred CCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC
Confidence 8864110111111267899999999999988776 9999998653 2222222333688999999
Q ss_pred CCCEEEEEECCC----eEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEe---cCCeEEEEecCCCCcc--eeEEe
Q 009569 412 DGKRIISICREA----AILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNL---INQEIHLWSIESDPKL--VSRYK 481 (532)
Q Consensus 412 ~~~~l~~~~~dg----~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~---~dg~i~iwd~~~~~~~--~~~~~ 481 (532)
||++|+.++.++ .|++||..++. ..+..+...+....+ +++.+++.+. .++.|.+||+.++ .. ...+.
T Consensus 237 DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~-~~~~~~~l~ 314 (695)
T 2bkl_A 237 DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKP-ARASWKEIV 314 (695)
T ss_dssp TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBC-SGGGCEEEE
T ss_pred CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCC-CccCCeEEe
Confidence 999998887666 68888765555 555566666666666 5666444433 2578999999776 32 34444
Q ss_pred ccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCC
Q 009569 482 GHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSF 517 (532)
Q Consensus 482 ~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~ 517 (532)
.+.....+..+.+ + ++.++++...|+..++|.+.
T Consensus 315 ~~~~~~~l~~~~~-~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 315 PEDSSASLLSVSI-V-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp CCCSSCEEEEEEE-E-TTEEEEEEEETTEEEEEEEE
T ss_pred cCCCCCeEEEEEE-E-CCEEEEEEEECCEEEEEEEe
Confidence 4432222333455 4 67888999999988887654
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.53 E-value=3.6e-11 Score=115.04 Aligned_cols=236 Identities=10% Similarity=0.017 Sum_probs=164.9
Q ss_pred ccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCc
Q 009569 271 HSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGE 350 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 350 (532)
+...+.+++++++|.+.++...++.|..|+.. +.... ..+......+..+++.+++.++++...++.|.+||. +++
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK--GIIKE-YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC--CcEEE-EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 45779999999999988887778899999875 33222 223334567899999999988888777889999998 565
Q ss_pred EEEE-eeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEe-ecCccCceEEEEEeeCCCEEEEEECCCeEEEE
Q 009569 351 CLHV-YEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESW-KGQKTLRISDMAITDDGKRIISICREAAILLL 428 (532)
Q Consensus 351 ~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iw 428 (532)
.... .......+..+++.++++.+++...++.|..||. ++.+..+ .......+.+++++++|+++++...++.|.+|
T Consensus 131 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 209 (299)
T 2z2n_A 131 IREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRI 209 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEE
Confidence 4432 2223456889999999987777767789999999 5555443 22223468899999999877776678899999
Q ss_pred ECCCCceeee---ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEe--ccccceEEEEEccCCCCCcEEE
Q 009569 429 DREANFERWI---EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYK--GHKRARFVIRSCFGGFEQAFIA 503 (532)
Q Consensus 429 d~~~~~~~~~---~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~i~~~~~s~d~~~l~ 503 (532)
|. ++..... .....+.+++++++|++.++...++.|..||. ++ . +..+. .+.... ..+.+ +++.+.+
T Consensus 210 ~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g-~-~~~~~~~~~~~~~--~~i~~--~~g~l~v 281 (299)
T 2z2n_A 210 TT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NN-I-IEEYPIQIKSAEP--HGICF--DGETIWF 281 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TT-E-EEEEECSSSSCCE--EEEEE--CSSCEEE
T ss_pred CC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CC-c-eEEEeCCCCCCcc--ceEEe--cCCCEEE
Confidence 99 5552222 23467889999999987666657889999998 33 3 33443 222332 23334 6777666
Q ss_pred EEeCCCcEEEEeCCCCC
Q 009569 504 SGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 504 sgs~dg~i~iw~~~~~~ 520 (532)
+.+ .+.|..++..++.
T Consensus 282 ~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 282 AME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EET-TTEEEEEEEC---
T ss_pred Eec-CCcEEEEEcCccc
Confidence 544 6778888877653
No 196
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.51 E-value=7.8e-11 Score=112.69 Aligned_cols=240 Identities=10% Similarity=0.064 Sum_probs=169.5
Q ss_pred cccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCC
Q 009569 270 AHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSG 349 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~ 349 (532)
.....+.++++.++|+..++...++.|.+|+.. + .+.. ..+..+...+..+++.+++..+++...++.|..||.. +
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~-~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-G-RIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S-CEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-C-ceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 345678999999999988877778999999977 3 3322 2233445678999999999888777768899999987 6
Q ss_pred cEEEE-eeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEee-cCccCceEEEEEeeCCCEEEEEECCCeEEE
Q 009569 350 ECLHV-YEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWK-GQKTLRISDMAITDDGKRIISICREAAILL 427 (532)
Q Consensus 350 ~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~I~i 427 (532)
+.... .......+.++++.++++.+++...++.|..||.. +....+. ......+.+++++++++.+++...++.|..
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGR 171 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEE
Confidence 54322 22234668899999999888777778899999988 4444332 223347899999999996666666789999
Q ss_pred EECCCCc-eeee--ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeE-EeccccceEEEEEccCCCCCcEEE
Q 009569 428 LDREANF-ERWI--EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSR-YKGHKRARFVIRSCFGGFEQAFIA 503 (532)
Q Consensus 428 wd~~~~~-~~~~--~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~i~~~~~s~d~~~l~ 503 (532)
||. ++. ..+. .....+.++++++++++.++....+.|.+||. ++ ..... ...+... ...+++ +++|++.+
T Consensus 172 ~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g-~~~~~~~~~~~~~--~~~i~~-d~~g~l~v 245 (300)
T 2qc5_A 172 ITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TG-EISEYDIPTPNAR--PHAITA-GKNSEIWF 245 (300)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC-CEEEEECSSTTCC--EEEEEE-CSTTCEEE
T ss_pred ECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CC-cEEEEECCCCCCC--ceEEEE-CCCCCEEE
Confidence 998 444 2222 23356889999999987777766788999998 43 32222 2222222 233455 78888777
Q ss_pred EEeCCCcEEEEeCCCCCc
Q 009569 504 SGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 504 sgs~dg~i~iw~~~~~~~ 521 (532)
+...++.|..|+. ++..
T Consensus 246 ~~~~~~~i~~~~~-~g~~ 262 (300)
T 2qc5_A 246 TEWGANQIGRITN-DNTI 262 (300)
T ss_dssp EETTTTEEEEECT-TSCE
T ss_pred eccCCCeEEEECC-CCcE
Confidence 6666789999998 4443
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=2.2e-12 Score=122.51 Aligned_cols=186 Identities=16% Similarity=0.114 Sum_probs=146.4
Q ss_pred CCCEEEEeeCCCcEEEEECCCCcEEEEeeccC-CceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEE
Q 009569 328 NDHQLLTCGQEEAIRRWDVNSGECLHVYEKTG-VGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISD 406 (532)
Q Consensus 328 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 406 (532)
.++.|++++.++.|.+||.++|+.+..+..+. ..+.++.+.|+|+.++ +.++.|..||..+..+..+.......+.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITRDGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTTSCEEEEEECCTTCEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECCCCCEEEEEcCCCCccccc
Confidence 46789999999999999999999999998765 4688999999999888 45788999999666666665543347889
Q ss_pred EEEeeCCCEEEEEEC-CCeEEEEECCCCce-eee------ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCccee
Q 009569 407 MAITDDGKRIISICR-EAAILLLDREANFE-RWI------EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVS 478 (532)
Q Consensus 407 ~~~s~~~~~l~~~~~-dg~I~iwd~~~~~~-~~~------~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~ 478 (532)
+.+.++|+++++.+. ++.|..+|...... .+. .+......+++.++|+++++...++.|..||.. + +.+.
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G-~~~w 159 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G-QLLN 159 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S-CEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C-CEEE
Confidence 999999999999887 88888888744432 211 111235567889999999999999999999987 6 7888
Q ss_pred EEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 479 RYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 479 ~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
++.....+. . +.. .++|+++++++.+++|..||..+++.
T Consensus 160 ~~~~~~~~~-~--~~~-~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 160 SVKLSGTPF-S--SAF-LDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp EEECSSCCC-E--EEE-CTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred EEECCCCcc-c--eeE-cCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 887654332 2 333 68899999998888999999998764
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.50 E-value=2.8e-12 Score=123.20 Aligned_cols=200 Identities=12% Similarity=0.034 Sum_probs=144.1
Q ss_pred EeecCCCCeEEEEeCCCCC-EEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC
Q 009569 312 RLSGHRKPVFTVSWSPNDH-QLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG 390 (532)
Q Consensus 312 ~~~~h~~~v~~l~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 390 (532)
.+..+.....+++|+|+++ +++++..++.|..||..++ ...+..+...+.+++++|+|+++++...++.|.+||..+
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 3344556678999999998 7778888999999999887 566766777899999999999877777778999999976
Q ss_pred CeEEEeecC----ccCceEEEEEeeCCCEEEEE----E-------------CCCeEEEEECCCCc-eeeeecCCceeEEE
Q 009569 391 RELESWKGQ----KTLRISDMAITDDGKRIISI----C-------------REAAILLLDREANF-ERWIEEEEVITSFS 448 (532)
Q Consensus 391 ~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~----~-------------~dg~I~iwd~~~~~-~~~~~~~~~i~~~~ 448 (532)
+....+... ....+.+++++|+|+++++. + ..+.|..+|.. +. .....+......++
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~ 178 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLA 178 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEE
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEE
Confidence 655544321 11256789999999988873 2 13567777766 44 44455566778999
Q ss_pred EcCCCCEEEEEecCCeEEEEecCCCCcc---eeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 449 LSKDNKYLLVNLINQEIHLWSIESDPKL---VSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 449 ~sp~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
|+|+++.+++.+.++.|++||+...... ...+..+.... ..+++ +++|+++++. ++.|.+|+....
T Consensus 179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p--~~i~~-d~~G~l~v~~--~~~v~~~~~~g~ 247 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKT--DGLRV-DAGGLIWASA--GDGVHVLTPDGD 247 (296)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCC--CSEEE-BTTSCEEEEE--TTEEEEECTTSC
T ss_pred ECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCC--CeEEE-CCCCCEEEEc--CCeEEEECCCCC
Confidence 9999999977777899999999732133 22332122111 12344 8899876655 889999998743
No 199
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.49 E-value=2.6e-12 Score=121.33 Aligned_cols=198 Identities=5% Similarity=-0.054 Sum_probs=147.5
Q ss_pred ccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEee-cCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCC
Q 009569 271 HSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS-GHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSG 349 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~ 349 (532)
+...+.+++++++|+++++.. ++.|.+||.... .. ..+. .....+..++++++|+.+++...++.|.+|+..+.
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~-~~---~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 139 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN-NQ---TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK 139 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS-CC---EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc-eE---eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc
Confidence 345678999999999666665 889999997643 21 1222 23356899999999998777777889999987655
Q ss_pred cEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEE
Q 009569 350 ECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLD 429 (532)
Q Consensus 350 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd 429 (532)
............+.+++++++++.+++...++.|.+||..+.............+.+++++++|..+++...++.|.+||
T Consensus 140 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 140 TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLL 219 (270)
T ss_dssp SCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEEC
T ss_pred eeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEc
Confidence 44332222334578899999998777777788999999987665544333324789999999997777777788999999
Q ss_pred CCCCceeee--ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 430 REANFERWI--EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 430 ~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
..+...... .+...+.+++++++|+++++...++.|+++++...
T Consensus 220 ~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 220 AGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp TTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 877652222 22356899999999998888888999999998765
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.47 E-value=2e-11 Score=119.17 Aligned_cols=214 Identities=10% Similarity=0.004 Sum_probs=150.7
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCC-----CCeEEEEeCCCCCEEEEee
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHR-----KPVFTVSWSPNDHQLLTCG 336 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~-----~~v~~l~~s~~~~~l~s~~ 336 (532)
.+.+..+. .......++++++++..++...++.|.+||..++ +....+.... .....+++ ++..++.+.
T Consensus 74 ~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~---~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~ 147 (328)
T 3dsm_A 74 FKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY---EITGYIECPDMDMESGSTEQMVQ--YGKYVYVNC 147 (328)
T ss_dssp CCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT---EEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEE
T ss_pred cEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC---eEEEEEEcCCccccCCCcceEEE--ECCEEEEEc
Confidence 44555553 3467889999999965555548999999999865 2333333222 13456666 344555554
Q ss_pred --CCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCC----------CcEEEEECCCCeEEEeecC-ccCc
Q 009569 337 --QEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTD----------KSICLWDLDGRELESWKGQ-KTLR 403 (532)
Q Consensus 337 --~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~-~~~~ 403 (532)
.++.|.+||..+++.+..+... .....+.++|+|++++++..+ +.|.++|..+.++...... ....
T Consensus 148 ~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~ 226 (328)
T 3dsm_A 148 WSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDW 226 (328)
T ss_dssp CTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCC
T ss_pred CCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCC
Confidence 4889999999999988877643 345678899999877776554 7899999988776543322 2236
Q ss_pred eEEEEEeeCCCEEEEEECCCeEEEEECCCCce---eeeec-CCceeEEEEcCC-CCEEEEE----ecCCeEEEEecCCCC
Q 009569 404 ISDMAITDDGKRIISICREAAILLLDREANFE---RWIEE-EEVITSFSLSKD-NKYLLVN----LINQEIHLWSIESDP 474 (532)
Q Consensus 404 v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~~---~~~~~-~~~i~~~~~sp~-~~~l~~~----~~dg~i~iwd~~~~~ 474 (532)
...++++|+++.++++.. .|.+||..+++. .+... ......++++|+ +.++++. ..++.|.+||.. +
T Consensus 227 p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g- 302 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G- 302 (328)
T ss_dssp CEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C-
T ss_pred ceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C-
Confidence 899999999999888765 899999988762 12222 456889999994 5555555 568899999987 5
Q ss_pred cceeEEeccccc
Q 009569 475 KLVSRYKGHKRA 486 (532)
Q Consensus 475 ~~~~~~~~~~~~ 486 (532)
+.+.++.....+
T Consensus 303 ~~~~~i~~G~~P 314 (328)
T 3dsm_A 303 KLIDEFYVGIIP 314 (328)
T ss_dssp CEEEEEEEEESE
T ss_pred CEEEEEEeccCc
Confidence 788887654444
No 201
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.47 E-value=1e-11 Score=134.03 Aligned_cols=243 Identities=13% Similarity=0.145 Sum_probs=161.7
Q ss_pred cccccEEEEEEccCCCEEEEE-----eCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCc----
Q 009569 270 AHSDEVWFLQFSHDGKYLASS-----SKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEA---- 340 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~-----s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~---- 340 (532)
+|...+..++|||||++||.+ +.+.+|++||+.++..... .+... ....++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--PLKDV--KFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--EEEEE--ESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--ccCCc--eeccEEEe-CCCEEEEEEecCccccc
Confidence 466678899999999999843 3335799999998753321 22211 12467899 9999998887743
Q ss_pred ---------EEEEECCCCcE--EEEee--c-cCCceEEEEEeeCCCeEEEEeC----CCcEEEEECCCC--eEEEeecCc
Q 009569 341 ---------IRRWDVNSGEC--LHVYE--K-TGVGLISCGWFLDGGGIFAGMT----DKSICLWDLDGR--ELESWKGQK 400 (532)
Q Consensus 341 ---------i~iwd~~~~~~--~~~~~--~-~~~~i~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~--~~~~~~~~~ 400 (532)
|++|++.++.. ...+. . +.....++.|+|||++++.... .+.|+++|+.+. ....+....
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 99999987642 23333 2 3445778999999998866442 358999999764 445554443
Q ss_pred cCceEEEEEeeCCCEEEEEEC----CCeEEEEECCCCc----eeeeecCCceeEEEEcCCCCEEEEEecCC---eEEEEe
Q 009569 401 TLRISDMAITDDGKRIISICR----EAAILLLDREANF----ERWIEEEEVITSFSLSKDNKYLLVNLINQ---EIHLWS 469 (532)
Q Consensus 401 ~~~v~~~~~s~~~~~l~~~~~----dg~I~iwd~~~~~----~~~~~~~~~i~~~~~sp~~~~l~~~~~dg---~i~iwd 469 (532)
. ..... ++++|..|+..+. .+.|..+|+.+.. ..+..+...+. .|++++++|+....++ .|++||
T Consensus 281 ~-~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 281 D-ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp S-SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred C-ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 3 34443 6777777666553 3679999998754 35566666554 8999999888776544 689999
Q ss_pred cCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCC----CcEEEEeCCCCCceeee
Q 009569 470 IESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSED----SQVNIFLSFSPFAKKIK 525 (532)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~d----g~i~iw~~~~~~~~~~~ 525 (532)
+.+. ....+..... ..+....+ ++++..|+....+ +.|+.||+.++....+.
T Consensus 357 ~~g~--~~~~l~~p~~-~~~~~~~~-~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 357 YEGK--RVREVALPGL-GSVSGFNG-KHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp TTSC--EEEEECCSSS-SEEEECCC-CTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred CCCC--eeEEeecCCC-ceEEeeec-CCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 8754 3444432221 12333444 6777766655444 88999999887655443
No 202
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.46 E-value=1.5e-12 Score=128.37 Aligned_cols=173 Identities=12% Similarity=0.102 Sum_probs=135.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCeEEEEEeecCC--------eeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEE
Q 009569 274 EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDG--------QVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWD 345 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~--------~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 345 (532)
.+..+++++...++++|+.++ +.+|++.+.. .+...... .+.+ |+.++| |+.+|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 688999999999999999884 5669976321 01121222 3566 999999 89999998 889999999
Q ss_pred CCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeE
Q 009569 346 VNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAI 425 (532)
Q Consensus 346 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I 425 (532)
+.+.........+...+.++.+.+. .+++++.||.+.+||+.++..... ...|++++|+|+| ++.+..||.+
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~----~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL----AQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE----EESEEEEEECSSE--EEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccc----cCCceEEEEcCCc--eEEEEcCCcE
Confidence 9887766666677777888777654 388899999999999987655432 2379999999999 7789999999
Q ss_pred EEEECCCCce---eee----------ecCCceeEEEEcCCCCEEEEEe
Q 009569 426 LLLDREANFE---RWI----------EEEEVITSFSLSKDNKYLLVNL 460 (532)
Q Consensus 426 ~iwd~~~~~~---~~~----------~~~~~i~~~~~sp~~~~l~~~~ 460 (532)
++|+...... ..+ .|...|.++.|.+++.++++-.
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9999887662 222 2678899999999999988743
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.46 E-value=1.5e-10 Score=111.28 Aligned_cols=225 Identities=11% Similarity=0.033 Sum_probs=152.1
Q ss_pred cccccEEEEEEccC-CCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCC
Q 009569 270 AHSDEVWFLQFSHD-GKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNS 348 (532)
Q Consensus 270 ~h~~~V~~v~~s~~-g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 348 (532)
.+..---+..|+|+ +.++++...++.|..||..++.. ..+ .....+.+++++++|+++++ . ++.|.+||..+
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~----~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~ 82 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV----QRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKE 82 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE----EEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTT
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE----EEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCC
Confidence 34445568889995 55666777789999999885432 122 24567999999999995554 3 56899999988
Q ss_pred CcEEEEeecc----CCceEEEEEeeCCCeEEEEeC-----------CCcEEEEECCCCeEEEeecCccCceEEEEEeeCC
Q 009569 349 GECLHVYEKT----GVGLISCGWFLDGGGIFAGMT-----------DKSICLWDLDGRELESWKGQKTLRISDMAITDDG 413 (532)
Q Consensus 349 ~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~ 413 (532)
++........ ...+..+++.|+|+++++... .+.|+.+|..+. ........ ...+.++|+|++
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~-~~pngi~~spdg 160 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQV-DISNGLDWSLDH 160 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEE-SBEEEEEECTTS
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeecc-ccccceEEcCCC
Confidence 8754433221 235788999999986665432 234555555433 32222222 257899999999
Q ss_pred CEEEEE-ECCCeEEEEECC--CCc----eeee---ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEecc
Q 009569 414 KRIISI-CREAAILLLDRE--ANF----ERWI---EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGH 483 (532)
Q Consensus 414 ~~l~~~-~~dg~I~iwd~~--~~~----~~~~---~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 483 (532)
+.++.+ +.++.|.+||+. ++. ..+. .....+..++++++|++.++....+.|..||..++ +.+..+..+
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG-~~~~~i~~p 239 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG-KRLQTVKLP 239 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC-CEEEEEECS
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc-eEEEEEECC
Confidence 877554 457899999973 433 1111 12356789999999988777777888999999877 778888766
Q ss_pred ccceEEEEEccCCCCCcEEEEEe
Q 009569 484 KRARFVIRSCFGGFEQAFIASGS 506 (532)
Q Consensus 484 ~~~~~~i~~~~~s~d~~~l~sgs 506 (532)
... ...++|..|+++.|+..+
T Consensus 240 ~~~--~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 240 VDK--TTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp SSB--EEEEEEESGGGCEEEEEE
T ss_pred CCC--ceEEEEeCCCCCEEEEEc
Confidence 444 345777448877665544
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.45 E-value=2.4e-11 Score=117.32 Aligned_cols=234 Identities=12% Similarity=0.063 Sum_probs=158.6
Q ss_pred eEEcccccccEEEEEEccCCC-EEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEE
Q 009569 265 LQILEAHSDEVWFLQFSHDGK-YLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRR 343 (532)
Q Consensus 265 ~~~l~~h~~~V~~v~~s~~g~-~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~i 343 (532)
+..+..+........|+|+|+ +++++..++.|..|+.. + .. ..+..+...+..++++++|+++++...++.|.+
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g-~~---~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G-TV---DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-S-CE---EEEEESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-C-CE---EEEeCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 334444555677899999998 56677788999999873 3 22 334446677899999999997766556688999
Q ss_pred EECCCCcEEEEeecc----CCceEEEEEeeCCCeEEE----EeC-------------CCcEEEEECCCCeEEEeecCccC
Q 009569 344 WDVNSGECLHVYEKT----GVGLISCGWFLDGGGIFA----GMT-------------DKSICLWDLDGRELESWKGQKTL 402 (532)
Q Consensus 344 wd~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~ 402 (532)
|+.. ++........ ...+..+++.|+|+.+++ |.. .+.|+.||..++.+.... ...
T Consensus 112 ~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~ 188 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD 188 (305)
T ss_dssp ECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES
T ss_pred ECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC
Confidence 9986 6543322211 234667999999998876 332 256888888665554444 223
Q ss_pred ceEEEEEeeCCCEEEEEECC------CeEEEEECCCCc----eeee-ecCCceeEEEEcCCCCEEEEEecCCeEEEEecC
Q 009569 403 RISDMAITDDGKRIISICRE------AAILLLDREANF----ERWI-EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 403 ~v~~~~~s~~~~~l~~~~~d------g~I~iwd~~~~~----~~~~-~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~ 471 (532)
....++|+||++.|+++... +.|.+||+.... ..+. .....+..++++++|+ |.+++.+ .|.+|+..
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~~~~~~ 266 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVCVFDSD 266 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-EEEEECTT
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-cEEEECCC
Confidence 67889999999988877765 789999987543 1111 1234456799999999 4444444 59999984
Q ss_pred CCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEe
Q 009569 472 SDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFL 515 (532)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~ 515 (532)
+ +.+..+..+.. ...++| +++++.|+.++.++ ++.++
T Consensus 267 -g-~~~~~~~~~~~---~~~~~f-~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 267 -G-QLLGHIPTPGT---ASNCTF-DQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp -S-CEEEEEECSSC---CCEEEE-CTTSCEEEEEETTE-EEEEE
T ss_pred -C-CEEEEEECCCc---eeEEEE-eCCCCEEEEEcCCe-EEEEE
Confidence 4 56777765553 244677 68888888777654 44443
No 205
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.45 E-value=1.3e-11 Score=122.25 Aligned_cols=221 Identities=7% Similarity=-0.013 Sum_probs=150.7
Q ss_pred CCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeC----------CCcEEEEECCCCcEEEEeecc---
Q 009569 292 KDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQ----------EEAIRRWDVNSGECLHVYEKT--- 358 (532)
Q Consensus 292 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~--- 358 (532)
.|+.|.+||..++. ....+..+..+ .++|+||++++++++. ++.|.+||..+++.+..+...
T Consensus 29 ~d~~v~v~D~~t~~---~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~ 103 (361)
T 2oiz_A 29 TESRVHVYDYTNGK---FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR 103 (361)
T ss_dssp GGCEEEEEETTTCC---EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB
T ss_pred ccCeEEEEECCCCe---EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc
Confidence 47899999987663 34556555554 8999999999998863 568999999999988877643
Q ss_pred ---CCceEEEEEeeCCCeEEEEeC--CCcEEEEECCCCeEEEe-ecCccCceEEEEEeeCC-CEEEEEECCCeEEEEECC
Q 009569 359 ---GVGLISCGWFLDGGGIFAGMT--DKSICLWDLDGRELESW-KGQKTLRISDMAITDDG-KRIISICREAAILLLDRE 431 (532)
Q Consensus 359 ---~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~-~~l~~~~~dg~I~iwd~~ 431 (532)
......++++|+|++++++.. ++.|.+||+.+.+.... .... ....+.+.|++ ..+++.+.||.+.+|+..
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGLLTINLG 181 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTSSEEEEEEC
T ss_pred cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCCcEEEEEEC
Confidence 244677999999999999874 58999999998876554 4332 23446677765 677888999999999986
Q ss_pred C-Ccee-------eeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCc-ceeEEeccc----------cceEEEEE
Q 009569 432 A-NFER-------WIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPK-LVSRYKGHK----------RARFVIRS 492 (532)
Q Consensus 432 ~-~~~~-------~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~----------~~~~~i~~ 492 (532)
. ++.. ..........+.++|++..++..+.++.|+++|+..... .+..+.... ..... +
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~--~ 259 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNL--V 259 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSC--E
T ss_pred CCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeE--E
Confidence 5 3321 111111112334567787788788899999999875421 122221100 00001 2
Q ss_pred ccCCCCCcEEEEEeC-----------CCcEEEEeCCCCCce
Q 009569 493 CFGGFEQAFIASGSE-----------DSQVNIFLSFSPFAK 522 (532)
Q Consensus 493 ~~~s~d~~~l~sgs~-----------dg~i~iw~~~~~~~~ 522 (532)
.| +|+++.++++.. ++.|.+||+.+++..
T Consensus 260 a~-~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v 299 (361)
T 2oiz_A 260 GL-HRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRV 299 (361)
T ss_dssp EE-ETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEE
T ss_pred EE-ecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEE
Confidence 34 889888777643 347999999987543
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.44 E-value=2e-11 Score=119.91 Aligned_cols=251 Identities=9% Similarity=0.047 Sum_probs=165.6
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEe----------CCCeEEEEEeecCCeeEEEEEeec-C---CCCeEEEEeCC
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSS----------KDQSAIIWEVKEDGQVSLKHRLSG-H---RKPVFTVSWSP 327 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s----------~dg~i~iwd~~~~~~~~~~~~~~~-h---~~~v~~l~~s~ 327 (532)
.+.+..+..-..+ . ++++|||+++++++ .++.|.+||..+......+..-.+ + ......+.|+|
T Consensus 69 ~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp 146 (386)
T 3sjl_D 69 GRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP 146 (386)
T ss_dssp TEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT
T ss_pred CeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC
Confidence 4556666544445 4 99999999887765 367899999987643322221110 0 12345789999
Q ss_pred CCCEEEEeeC--CCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC-CeEEEeec-C---c
Q 009569 328 NDHQLLTCGQ--EEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG-RELESWKG-Q---K 400 (532)
Q Consensus 328 ~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~-~---~ 400 (532)
||++++++.. ++.|.++|+.+++.+..+.... + ...+....+.+++.+.||.+.+.++.. +.+..... . .
T Consensus 147 DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~ 223 (386)
T 3sjl_D 147 DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE 223 (386)
T ss_dssp TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCT
T ss_pred CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccc
Confidence 9999988864 6899999999999998886432 1 222333556777888899999999864 34322111 1 1
Q ss_pred cCce-EEEEEe-eCCCEEEEEECCCeEEEEECCCCceeee---e-----------cCCceeEEEEcCCCCEEEEEec---
Q 009569 401 TLRI-SDMAIT-DDGKRIISICREAAILLLDREANFERWI---E-----------EEEVITSFSLSKDNKYLLVNLI--- 461 (532)
Q Consensus 401 ~~~v-~~~~~s-~~~~~l~~~~~dg~I~iwd~~~~~~~~~---~-----------~~~~i~~~~~sp~~~~l~~~~~--- 461 (532)
...+ ....|. ++|++++ .+.+|.|++.|..+...... . .......++++|+++.+++...
T Consensus 224 ~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~ 302 (386)
T 3sjl_D 224 DEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRD 302 (386)
T ss_dssp TSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECC
T ss_pred cccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecccc
Confidence 1122 224664 5775444 66789999999976641111 0 1223445788999998888753
Q ss_pred -------CCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCc-EEEEE-eCCCcEEEEeCCCCCcee
Q 009569 462 -------NQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQA-FIASG-SEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 462 -------dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~-~l~sg-s~dg~i~iw~~~~~~~~~ 523 (532)
.+.|.++|+.+. +.+.++..... . ..+.+ ++|++ +|++. ..++.|.++|..+++...
T Consensus 303 ~~~hk~~~~~V~viD~~t~-kv~~~i~vg~~-~--~~lav-s~D~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 303 EWRHKTASRFVVVLDAKTG-ERLAKFEMGHE-I--DSINV-SQDEKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp TTCTTSCEEEEEEEETTTC-CEEEEEEEEEE-E--CEEEE-CSSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred ccccCCCCCEEEEEECCCC-eEEEEEECCCC-c--ceEEE-CCCCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 247999999998 78887765432 2 23455 89986 66664 458999999999987543
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.42 E-value=2.3e-11 Score=121.59 Aligned_cols=251 Identities=10% Similarity=0.057 Sum_probs=170.5
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEe----------CCCeEEEEEeecCCeeEEEEEee--c---CCCCeEEEEeC
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSS----------KDQSAIIWEVKEDGQVSLKHRLS--G---HRKPVFTVSWS 326 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s----------~dg~i~iwd~~~~~~~~~~~~~~--~---h~~~v~~l~~s 326 (532)
.+.+..+..-..+ .++++|||++++++. .++.|.++|..+......+. +. . .......+.|+
T Consensus 109 ~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~-v~g~~r~~~g~~P~~~~~s 185 (426)
T 3c75_H 109 GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIE-LPDAPRFLVGTYQWMNALT 185 (426)
T ss_dssp TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE-ETTCCCCCBSCCGGGSEEC
T ss_pred CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEE-CCCccccccCCCcceEEEc
Confidence 4556666544455 899999999888775 36789999998764332222 11 0 01234578999
Q ss_pred CCCCEEEEeeC--CCcEEEEECCCCcEEEEeeccCCceEEEEEeeCC-CeEEEEeCCCcEEEEECCCCeEEEe----ecC
Q 009569 327 PNDHQLLTCGQ--EEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDG-GGIFAGMTDKSICLWDLDGRELESW----KGQ 399 (532)
Q Consensus 327 ~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~----~~~ 399 (532)
|||++++++.. ++.|.+.|+.+++.+..+..... ....|++ ..+++.+.||.+.+.++.++.+... ...
T Consensus 186 pDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v 261 (426)
T 3c75_H 186 PDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHT 261 (426)
T ss_dssp TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSC
T ss_pred CCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeecc
Confidence 99999999874 57899999999998888764321 2334433 5566677788888888855443321 111
Q ss_pred ccCc-eEEEEEeeCCCEEEEEECCCeEEEEECCCCceeeee--------------cCCceeEEEEcCCCCEEEEEec---
Q 009569 400 KTLR-ISDMAITDDGKRIISICREAAILLLDREANFERWIE--------------EEEVITSFSLSKDNKYLLVNLI--- 461 (532)
Q Consensus 400 ~~~~-v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~~~~~~--------------~~~~i~~~~~sp~~~~l~~~~~--- 461 (532)
...+ ...+.+.+++..++..+..+.|.+.|.......... .......++++|+++.+++...
T Consensus 262 ~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~ 341 (426)
T 3c75_H 262 EDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRD 341 (426)
T ss_dssp TTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECC
T ss_pred CCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccc
Confidence 1111 224577999998888888999999998765421110 0111223789999988877653
Q ss_pred -------CCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCc-EEEEEe-CCCcEEEEeCCCCCceee
Q 009569 462 -------NQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQA-FIASGS-EDSQVNIFLSFSPFAKKI 524 (532)
Q Consensus 462 -------dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~-~l~sgs-~dg~i~iw~~~~~~~~~~ 524 (532)
++.|.++|+.+. +.+.++.....+ ..+.| +||++ ++++.. .++.|.++|..+.+....
T Consensus 342 ~gthk~~s~~VsVID~~T~-kvv~~I~vg~~P---~gia~-spDg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 342 EWKHKAASRFVVVLNAETG-ERINKIELGHEI---DSINV-SQDAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp TTCTTSCEEEEEEEETTTC-CEEEEEEEEEEE---CEEEE-CCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred cccccCCCCEEEEEECCCC-eEEEEEECCCCc---CeEEE-ccCCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 357999999998 888888654432 34555 99999 888887 599999999999876543
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.41 E-value=4.2e-10 Score=107.54 Aligned_cols=235 Identities=11% Similarity=0.047 Sum_probs=161.1
Q ss_pred cccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCC
Q 009569 270 AHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSG 349 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~ 349 (532)
.+...+.++++.++|.+.++...++.|..||.. + ... ..........+.++++.+++.++++...++.|..||.. +
T Consensus 59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g-~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 134 (300)
T 2qc5_A 59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G-GFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-G 134 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S-CEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S
T ss_pred CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C-CeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-C
Confidence 344678999999999988877778889999876 3 322 22333344678999999999888877778899999987 6
Q ss_pred cEEEE-eeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeec-CccCceEEEEEeeCCCEEEEEECCCeEEE
Q 009569 350 ECLHV-YEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKG-QKTLRISDMAITDDGKRIISICREAAILL 427 (532)
Q Consensus 350 ~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~I~i 427 (532)
+.... +......+.++++.++++.+++...++.|..||..+ ....+.. .....+.+++++++|+++++....+.|.+
T Consensus 135 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 213 (300)
T 2qc5_A 135 TIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTG-KLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGR 213 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC-CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred CEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCC-cEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEE
Confidence 55432 222345688999999998666666678999999844 3333322 23346899999999987777667788999
Q ss_pred EECCCCceee--eecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEecc--ccceEEEEEccCCCCCcEEE
Q 009569 428 LDREANFERW--IEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGH--KRARFVIRSCFGGFEQAFIA 503 (532)
Q Consensus 428 wd~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~i~~~~~s~d~~~l~ 503 (532)
||........ ......+.+++++++|++.++...++.|..||.. + .. ..+... ...... +.+ +++|.+.+
T Consensus 214 ~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g-~~-~~~~~~~~~~~~~~--i~~-~~~g~l~v 287 (300)
T 2qc5_A 214 ITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-N-TI-QEYQLQTENAEPHG--ITF-GKDGSVWF 287 (300)
T ss_dssp ECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S-CE-EEEECCSTTCCCCC--EEE-CTTSCEEE
T ss_pred EcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-C-cE-EEEECCccCCccce--eEe-CCCCCEEE
Confidence 9983322222 1234568899999999877666667899999983 3 22 233221 222222 333 77887666
Q ss_pred EEeCCCcEEEEeCC
Q 009569 504 SGSEDSQVNIFLSF 517 (532)
Q Consensus 504 sgs~dg~i~iw~~~ 517 (532)
+.. . .|..++.+
T Consensus 288 ~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 288 ALK-C-KIGKLNLN 299 (300)
T ss_dssp ECS-S-EEEEEEEC
T ss_pred Ecc-C-ceEEeCCC
Confidence 554 4 77777653
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.38 E-value=9.3e-10 Score=107.15 Aligned_cols=220 Identities=9% Similarity=-0.003 Sum_probs=148.0
Q ss_pred cEEEEEEccCC-CEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEE
Q 009569 274 EVWFLQFSHDG-KYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECL 352 (532)
Q Consensus 274 ~V~~v~~s~~g-~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 352 (532)
-..+..|+|++ .++++...++.|..||..++ ... .+. ....+.++.|+++|++++++ . ..|.+||..+++..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~-~~~---~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASG-RKT---VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLT 122 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTT-EEE---EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCC-cEE---EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEE
Confidence 34578899974 55666777899999998754 221 222 34679999999999877764 3 35999999888764
Q ss_pred EEeecc----CCceEEEEEeeCCCeEEEEeC------CCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-C
Q 009569 353 HVYEKT----GVGLISCGWFLDGGGIFAGMT------DKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-R 421 (532)
Q Consensus 353 ~~~~~~----~~~i~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~ 421 (532)
...... ...+..++++|+|+++++... .+.|+.++ ++......... .....++|+|+++.++.+. .
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~-~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI-SIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE-SSEEEEEECTTSCEEEEEETT
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC-cccCCeEEcCCCCEEEEEECC
Confidence 332211 235889999999987665432 25677777 44544433222 2578899999998776554 5
Q ss_pred CCeEEEEECC--CC-c----eeeee---cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEE
Q 009569 422 EAAILLLDRE--AN-F----ERWIE---EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIR 491 (532)
Q Consensus 422 dg~I~iwd~~--~~-~----~~~~~---~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~ 491 (532)
++.|.+||+. ++ . ..+.. ....+..++++++|.+.++...++.|.+||. ++ +.+..+..+... +..
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g-~~~~~i~~~~~~--~~~ 275 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DG-NHIARYEVPGKQ--TTC 275 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TC-CEEEEEECSCSB--EEE
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CC-CEEEEEECCCCC--cEE
Confidence 6899999985 44 3 11221 2345788999999987777766789999998 44 566777665544 344
Q ss_pred EccCCCCCcEEEEEeC
Q 009569 492 SCFGGFEQAFIASGSE 507 (532)
Q Consensus 492 ~~~~s~d~~~l~sgs~ 507 (532)
++|..+++..|+.++.
T Consensus 276 ~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 276 PAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEESTTSCEEEEEEB
T ss_pred EEEecCCCCEEEEEec
Confidence 6663378776655443
No 210
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=1e-10 Score=114.90 Aligned_cols=236 Identities=9% Similarity=0.024 Sum_probs=157.5
Q ss_pred ccEEEEEEccCCCEEEEEe--CCCeEEEEEeecCCeeEEEEEe-------ecCCCCeEEEEeCCCCCEEEEeeC-----C
Q 009569 273 DEVWFLQFSHDGKYLASSS--KDQSAIIWEVKEDGQVSLKHRL-------SGHRKPVFTVSWSPNDHQLLTCGQ-----E 338 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s--~dg~i~iwd~~~~~~~~~~~~~-------~~h~~~v~~l~~s~~~~~l~s~~~-----d 338 (532)
..+..++++|+|+++++.. .++.++||.+. .+.+ ..+ ..|-..+..++++++++++++-.. +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~---~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGL---IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEE---EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCe---ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 6789999999999988864 23446777776 3332 222 134567999999999876665433 5
Q ss_pred CcEEEEECCCCcEEEEeecc------CCceEEEEEeeCCCeE-EEEe---CCCcEEEEECCCCeEEEeecCc--------
Q 009569 339 EAIRRWDVNSGECLHVYEKT------GVGLISCGWFLDGGGI-FAGM---TDKSICLWDLDGRELESWKGQK-------- 400 (532)
Q Consensus 339 g~i~iwd~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l-~~~~---~dg~i~iwd~~~~~~~~~~~~~-------- 400 (532)
+.|.+||+.+++.+..+... ...+..+++++++..+ ++.. .++.|.+||+.++........+
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 78999999999877766532 2346889999865555 4444 5789999999866554443210
Q ss_pred ---------------------cCceEEEEEeeCCCEEEEEECCC-eEEEEECCC---Cc---------eeeeecCCceeE
Q 009569 401 ---------------------TLRISDMAITDDGKRIISICREA-AILLLDREA---NF---------ERWIEEEEVITS 446 (532)
Q Consensus 401 ---------------------~~~v~~~~~s~~~~~l~~~~~dg-~I~iwd~~~---~~---------~~~~~~~~~i~~ 446 (532)
...+..++|+|+++.|+++...+ .+..++... .. ....++......
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdg 252 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDG 252 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCce
Confidence 01368899999999888887665 566665321 10 122344456778
Q ss_pred EEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEe
Q 009569 447 FSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFL 515 (532)
Q Consensus 447 ~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~ 515 (532)
++++++|.++++...++.|.+||..++ +. ..+...........+++ ++++.++++.+..+.+.+|.
T Consensus 253 ia~d~~G~l~va~~~~~~V~~~d~~~G-~~-~~~~~~~~~~~p~~va~-~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 253 ISIDKDHNIYVGDLAHSAIGVITSADR-AY-KLLVTDEKLSWTDSFNF-GSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp EEECTTCCEEEEEGGGTEEEEEETTTT-EE-EEEEECGGGSCEEEEEE-CTTSCEEEEECCGGGSGGGB
T ss_pred EEECCCCCEEEEccCCCeEEEEECCCC-CE-EEEEECCceecCCeeEE-CCCCcEEEEeCccccccccc
Confidence 999999999999888999999998444 33 23322222222345666 78888888777555554443
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.37 E-value=5e-11 Score=129.73 Aligned_cols=229 Identities=10% Similarity=0.058 Sum_probs=146.1
Q ss_pred cCCCEEEEEeCCCe---EEEEEeec----CCeeEEEEE----eecCCCCeEEEEeCCCCCEEEEeeCC-----CcEEEEE
Q 009569 282 HDGKYLASSSKDQS---AIIWEVKE----DGQVSLKHR----LSGHRKPVFTVSWSPNDHQLLTCGQE-----EAIRRWD 345 (532)
Q Consensus 282 ~~g~~las~s~dg~---i~iwd~~~----~~~~~~~~~----~~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd 345 (532)
|+|++++....++. -.+|.... ++....+.. -.+|...+..++|||||++|+.++.+ ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 78888776654432 56676653 222222211 12233468899999999999887654 3699999
Q ss_pred CCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCc--------------EEEEECCCCe---EEEeec-CccCceEEE
Q 009569 346 VNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKS--------------ICLWDLDGRE---LESWKG-QKTLRISDM 407 (532)
Q Consensus 346 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~--------------i~iwd~~~~~---~~~~~~-~~~~~v~~~ 407 (532)
+.+++.+... .+...+..++|+|| +.|+.++.++. |++|++.+.. ...+.. .+...+..+
T Consensus 196 l~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 196 VADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp TTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 9999876532 12222357899999 98888876554 8999987543 222222 222258899
Q ss_pred EEeeCCCEEEEEECCC-----eEEEEECCCC--c--eeeeecCCceeEEEEcCCCCEEEEEecC----CeEEEEecCCCC
Q 009569 408 AITDDGKRIISICREA-----AILLLDREAN--F--ERWIEEEEVITSFSLSKDNKYLLVNLIN----QEIHLWSIESDP 474 (532)
Q Consensus 408 ~~s~~~~~l~~~~~dg-----~I~iwd~~~~--~--~~~~~~~~~i~~~~~sp~~~~l~~~~~d----g~i~iwd~~~~~ 474 (532)
.|+|||++|+..+.++ .|++||+.++ . ..+..+...+... ++|+|+.|+..+.+ +.|.+||+.+..
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 352 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST 352 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc
Confidence 9999999988877544 8999999776 3 3344444444444 35899988887753 459999987741
Q ss_pred -cceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCC
Q 009569 475 -KLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSF 517 (532)
Q Consensus 475 -~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~ 517 (532)
.....+..+... +..+.+ . ++.++++...|+..++|.+.
T Consensus 353 ~~~~~l~~~~~~~--l~~~~~-~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 353 PRFDTVVPESKDN--LESVGI-A-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp CEEEEEECCCSSE--EEEEEE-E-BTEEEEEEEETTEEEEEEEE
T ss_pred cccEEEecCCCCe--EEEEEE-E-CCEEEEEEEECCEEEEEEEe
Confidence 233333333332 223444 3 56788888899987776554
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.29 E-value=5.8e-11 Score=117.07 Aligned_cols=171 Identities=10% Similarity=0.084 Sum_probs=125.2
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEECCCCc-----------EEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEE
Q 009569 319 PVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGE-----------CLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWD 387 (532)
Q Consensus 319 ~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 387 (532)
+++.+++++...++++|+.+ .+.+|++.+.. ..... .+.. |+.++| +++.++++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68899999999999999988 55569875332 11222 3455 999999 88999998 889999999
Q ss_pred CCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCceeeeecCCceeEEEEcCCCCEEEEEecCCeEEE
Q 009569 388 LDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANFERWIEEEEVITSFSLSKDNKYLLVNLINQEIHL 467 (532)
Q Consensus 388 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i 467 (532)
+++.........+...+.++.+.+. .+++++.||.|.+||+.+.... .+...|+|++|||+| +++|..||.+++
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--~~~~~Vs~v~WSpkG--~~vg~~dg~i~~ 186 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--QLAQNVTSFDVTNSQ--LAVLLKDRSFQS 186 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE--EEEESEEEEEECSSE--EEEEETTSCEEE
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc--cccCCceEEEEcCCc--eEEEEcCCcEEE
Confidence 9753322222223336777777654 3888999999999999977632 245689999999999 678889999999
Q ss_pred EecCCCCcc--eeEE------e---ccccceEEEEEccCCCCCcEEEEE
Q 009569 468 WSIESDPKL--VSRY------K---GHKRARFVIRSCFGGFEQAFIASG 505 (532)
Q Consensus 468 wd~~~~~~~--~~~~------~---~~~~~~~~i~~~~~s~d~~~l~sg 505 (532)
|+.... +. ..++ . +|. ..++.++| .+++.++++=
T Consensus 187 ~~~~~~-~~~~k~~I~~Pp~~~~~~~~~--~~V~sI~w-l~~~~flv~y 231 (388)
T 1xip_A 187 FAWRNG-EMEKQFEFSLPSELEELPVEE--YSPLSVTI-LSPQDFLAVF 231 (388)
T ss_dssp EEEETT-EEEEEEEECCCHHHHTSCTTT--SEEEEEEE-SSSSEEEEEE
T ss_pred EcCCCc-cccccceecCCcccccccCCC--eeEEEEEE-ecCCeEEEEE
Confidence 998776 43 4455 2 233 44666777 6788888763
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.26 E-value=1.9e-09 Score=108.28 Aligned_cols=192 Identities=11% Similarity=0.094 Sum_probs=134.2
Q ss_pred EEEccCCCEEEEEeCCC--eEEEEEeecCCeeEEEEEeec-CCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEE
Q 009569 278 LQFSHDGKYLASSSKDQ--SAIIWEVKEDGQVSLKHRLSG-HRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHV 354 (532)
Q Consensus 278 v~~s~~g~~las~s~dg--~i~iwd~~~~~~~~~~~~~~~-h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 354 (532)
++|+|+++.|+++..++ .|.+|+...+........+.. +...+.+++++|++..|+.+..++.|+.||..++.....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 89999999998887766 788888775433222222222 456678899999555566677788999999987764332
Q ss_pred ----eeccCCce-E-EEEEeeC-CCeEEEEeCCCcEEEEECCCCeEEEeecCc--------------cCceEEEEEeeCC
Q 009569 355 ----YEKTGVGL-I-SCGWFLD-GGGIFAGMTDKSICLWDLDGRELESWKGQK--------------TLRISDMAITDDG 413 (532)
Q Consensus 355 ----~~~~~~~i-~-~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------~~~v~~~~~s~~~ 413 (532)
.......- . .++|+|+ +.++++-..++.|+.|+.++. ...+.... -.....++++|+|
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG 334 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG 334 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC
Confidence 11222111 3 8999995 555555567789999998865 32332221 1257899999999
Q ss_pred CEEEEEE-CCCeEEEEECCCCc-eeeeec---------------CCceeEEEEcCCCCEEEEEecCCeEEEEec
Q 009569 414 KRIISIC-REAAILLLDREANF-ERWIEE---------------EEVITSFSLSKDNKYLLVNLINQEIHLWSI 470 (532)
Q Consensus 414 ~~l~~~~-~dg~I~iwd~~~~~-~~~~~~---------------~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~ 470 (532)
+++++-+ .++.|+.||..++. ..+.++ -.....+++++++.++++-..++.|+.+++
T Consensus 335 ~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 335 NFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 9777777 78999999977766 333333 245789999999888877777888888775
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.25 E-value=5.5e-09 Score=100.18 Aligned_cols=200 Identities=11% Similarity=0.166 Sum_probs=133.8
Q ss_pred cCCCCeEEEEeCCCCC-EEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeE
Q 009569 315 GHRKPVFTVSWSPNDH-QLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGREL 393 (532)
Q Consensus 315 ~h~~~v~~l~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 393 (532)
.+..-..+..|+|++. ++++...++.|..||..+++. ..+. ....+.+++++++|++++ +. ++.|.+||.+++.+
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSA 85 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEE
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcE
Confidence 3444556889999654 555555678999999988765 3333 456789999999999544 44 56899999988776
Q ss_pred EEeecC----ccCceEEEEEeeCCCEEEEEEC-----------CCeEEEEECCCCceeeeecCCceeEEEEcCCCCEEEE
Q 009569 394 ESWKGQ----KTLRISDMAITDDGKRIISICR-----------EAAILLLDREANFERWIEEEEVITSFSLSKDNKYLLV 458 (532)
Q Consensus 394 ~~~~~~----~~~~v~~~~~s~~~~~l~~~~~-----------dg~I~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~ 458 (532)
..+... ....+++++++|+|+++++... .+.|+.+|.................++|+||++.|++
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEE
Confidence 554432 1235889999999997665432 2345555554322334444456789999999987755
Q ss_pred E-ecCCeEEEEecC--CCCcc-----eeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 459 N-LINQEIHLWSIE--SDPKL-----VSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 459 ~-~~dg~i~iwd~~--~~~~~-----~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
+ +.++.|.+||+. ++ .. +..+..+... .-.+++ +++|++.++...++.|..||..+++..
T Consensus 166 ~~~~~~~i~~~~~d~~~G-~~~~~~~~~~~~~~~~~--p~g~~~-d~~G~lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTG-QISNRRSVYKLEKEEQI--PDGMCI-DAEGKLWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp EEGGGTEEEEEEECTTTC-CEEEEEEEEECCGGGCE--EEEEEE-BTTSCEEEEEETTTEEEEECTTTCCEE
T ss_pred ecCCCCcEEEEeccCCCC-cccCcEEEEECCCCCCC--CCeeEE-CCCCCEEEEEcCCCEEEEEcCCCceEE
Confidence 4 557899999973 33 22 1122222222 223444 889988888777889999999977643
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.25 E-value=2.8e-09 Score=102.71 Aligned_cols=200 Identities=12% Similarity=0.082 Sum_probs=138.1
Q ss_pred cCCCCeEEEEeCCCCCEEEE-------eeCCCcEEEEECCCCcEEEEee----ccCCceEEEEEeeC-CCeEEEEeCCCc
Q 009569 315 GHRKPVFTVSWSPNDHQLLT-------CGQEEAIRRWDVNSGECLHVYE----KTGVGLISCGWFLD-GGGIFAGMTDKS 382 (532)
Q Consensus 315 ~h~~~v~~l~~s~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~----~~~~~i~~~~~~~~-~~~l~~~~~dg~ 382 (532)
..-....+++|++++..+++ ...++.|.+||..+++...... .+...+.+++++++ ++.++ ++..+.
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~ 93 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLG 93 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTE
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCC
Confidence 33445689999999988887 6778999999988887643322 13456889999998 65444 444557
Q ss_pred EEEEECCCCeEEEe-ecC----ccCceEEEEEeeCCCEEEEEECC---------------CeEEEEECCCCc-eeeeecC
Q 009569 383 ICLWDLDGRELESW-KGQ----KTLRISDMAITDDGKRIISICRE---------------AAILLLDREANF-ERWIEEE 441 (532)
Q Consensus 383 i~iwd~~~~~~~~~-~~~----~~~~v~~~~~s~~~~~l~~~~~d---------------g~I~iwd~~~~~-~~~~~~~ 441 (532)
|.+||.+ +..... ... ....+.+++++++|+++++...+ +.|..||.. +. .....+.
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~ 171 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF 171 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC
Confidence 9999998 655544 221 12358899999999887776654 578888876 44 3334444
Q ss_pred CceeEEEEc----CCCCEEEEE-ecCCeEEEEecC-CCCc-----ceeEEeccc-cceEEEEEccCCCCCcEEEEEeCCC
Q 009569 442 EVITSFSLS----KDNKYLLVN-LINQEIHLWSIE-SDPK-----LVSRYKGHK-RARFVIRSCFGGFEQAFIASGSEDS 509 (532)
Q Consensus 442 ~~i~~~~~s----p~~~~l~~~-~~dg~i~iwd~~-~~~~-----~~~~~~~~~-~~~~~i~~~~~s~d~~~l~sgs~dg 509 (532)
.....++|+ |+++.++++ ..++.|.+||+. ++ . ....+.++. .. ...+++ +++|+++++...++
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g-~~~~~~~~~~~~~~~~~~--p~~i~~-d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA-KIENKKVWGHIPGTHEGG--ADGMDF-DEDNNLLVANWGSS 247 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT-EEEEEEEEEECCCCSSCE--EEEEEE-BTTCCEEEEEETTT
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC-ccccceEEEECCCCCCCC--CCceEE-CCCCCEEEEEcCCC
Confidence 557889999 999766655 457899999986 33 2 122222221 22 233555 88999888887889
Q ss_pred cEEEEeCCCCCc
Q 009569 510 QVNIFLSFSPFA 521 (532)
Q Consensus 510 ~i~iw~~~~~~~ 521 (532)
.|.+|+..++..
T Consensus 248 ~i~~~d~~~g~~ 259 (314)
T 1pjx_A 248 HIEVFGPDGGQP 259 (314)
T ss_dssp EEEEECTTCBSC
T ss_pred EEEEEcCCCCcE
Confidence 999999986543
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.22 E-value=6.3e-10 Score=109.32 Aligned_cols=215 Identities=7% Similarity=-0.071 Sum_probs=140.5
Q ss_pred eEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee----------CCCcEEEEECCCCcEEEEeecc------
Q 009569 295 SAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG----------QEEAIRRWDVNSGECLHVYEKT------ 358 (532)
Q Consensus 295 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~------ 358 (532)
+|.++|..++ +.+.++.....+ .+.++||+++++++. .++.|.+||..+++.+..+...
T Consensus 47 ~vsvID~~t~---~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~ 121 (368)
T 1mda_H 47 ENWVSCAGCG---VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFS 121 (368)
T ss_dssp EEEEEETTTT---EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCC
T ss_pred eEEEEECCCC---eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccc
Confidence 8889998876 455555544555 799999999998886 3678999999999999888643
Q ss_pred -CCceEEEEEeeCCCeEEEEeC--CCcEEE--EECCCCeEEEeecCcc------CceEEEEE------------------
Q 009569 359 -GVGLISCGWFLDGGGIFAGMT--DKSICL--WDLDGRELESWKGQKT------LRISDMAI------------------ 409 (532)
Q Consensus 359 -~~~i~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~------~~v~~~~~------------------ 409 (532)
......+.++|||++++++.. +..+.+ +|+.+ +..+..... +.-.-+++
T Consensus 122 ~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 122 VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 123567899999999999874 467888 88865 222211000 00000111
Q ss_pred -------------------eeCCCEEEEEECCCeEEEEECCCCceeeee-----------c---CCceeEEEEcCCCCEE
Q 009569 410 -------------------TDDGKRIISICREAAILLLDREANFERWIE-----------E---EEVITSFSLSKDNKYL 456 (532)
Q Consensus 410 -------------------s~~~~~l~~~~~dg~I~iwd~~~~~~~~~~-----------~---~~~i~~~~~sp~~~~l 456 (532)
.+++..++..+. +.|.+.|..+....... + ......++++||++.+
T Consensus 200 ~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~l 278 (368)
T 1mda_H 200 GIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGI 278 (368)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEE
T ss_pred CeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEE
Confidence 333333444444 66777777543211110 0 0111227899999988
Q ss_pred EEEec-C--------CeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCc-EEEEEe-CCCcEEEEeCCCCCce
Q 009569 457 LVNLI-N--------QEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQA-FIASGS-EDSQVNIFLSFSPFAK 522 (532)
Q Consensus 457 ~~~~~-d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~-~l~sgs-~dg~i~iw~~~~~~~~ 522 (532)
+++.. . +.+.++|+.+. +.+.++.....+ ..+.| ++||+ .+++.. .++.|.++|+.+.+..
T Consensus 279 yV~~~~~~~~~~~~~~~~~ViD~~t~-~vv~~i~vg~~p---~gi~~-s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 279 MILTVEHSRSCLAAAENTSSVTASVG-QTSGPISNGHDS---DAIIA-AQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp EEEEEECSSCTTSCEEEEEEEESSSC-CEEECCEEEEEE---CEEEE-CCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred EEEeccccCcccccCCCEEEEECCCC-eEEEEEECCCCc---ceEEE-CCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 87654 2 35679999998 777777655432 34555 89997 556666 5999999999997654
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.20 E-value=2.3e-08 Score=98.96 Aligned_cols=230 Identities=9% Similarity=-0.012 Sum_probs=148.6
Q ss_pred EccCCCEEEEEeC--CC---eEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee----------CCCcEEEE
Q 009569 280 FSHDGKYLASSSK--DQ---SAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG----------QEEAIRRW 344 (532)
Q Consensus 280 ~s~~g~~las~s~--dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~----------~dg~i~iw 344 (532)
..|+++++.++.. .. +|.+||..++ +.+..+.....+ .+.++||+++++++. .++.|.+|
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~---~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~vi 102 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSG---SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVF 102 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCC---eEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEE
Confidence 3467776666543 22 8899999866 344555544444 899999999999886 36789999
Q ss_pred ECCCCcEEEEeecc-------CCceEEEEEeeCCCeEEEEeC--CCcEEEEECCCCeEEEe-ecCccCceEEEEEeeCC-
Q 009569 345 DVNSGECLHVYEKT-------GVGLISCGWFLDGGGIFAGMT--DKSICLWDLDGRELESW-KGQKTLRISDMAITDDG- 413 (532)
Q Consensus 345 d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~- 413 (532)
|..+.+.+..+... ......+.|+|||+++++++. ++.|.++| .++++... ..... ++.+.|++
T Consensus 103 D~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~ 177 (373)
T 2mad_H 103 DPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAP 177 (373)
T ss_pred ECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCC
Confidence 99998887766532 123557899999999999874 57899999 98776554 43321 24556665
Q ss_pred CEEEEEECCCeEEEEECCCCcee-ee------ecCCc-eeEEEEcCCCCEEEEEecCCeEEEEecCCCC-cceeEEeccc
Q 009569 414 KRIISICREAAILLLDREANFER-WI------EEEEV-ITSFSLSKDNKYLLVNLINQEIHLWSIESDP-KLVSRYKGHK 484 (532)
Q Consensus 414 ~~l~~~~~dg~I~iwd~~~~~~~-~~------~~~~~-i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~ 484 (532)
..+++.+.||.+.++|. ++... .. ....+ .....+.+++..++..+..+.+.+.|+.+.. ..+..+....
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALS 256 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecC
Confidence 45667778999999999 66522 11 11112 1334566766555544568899999987541 2222222110
Q ss_pred --------cceEEEEEccCCCCCcEEEEEeC----------CCcEEEEeCCCCCc
Q 009569 485 --------RARFVIRSCFGGFEQAFIASGSE----------DSQVNIFLSFSPFA 521 (532)
Q Consensus 485 --------~~~~~i~~~~~s~d~~~l~sgs~----------dg~i~iw~~~~~~~ 521 (532)
.+.....+.+ +++++.++.+.. ++.|.++|..+.+.
T Consensus 257 ~~~~~~~~~p~g~~~~~~-s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v 310 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAY-LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT 310 (373)
T ss_pred CcccccceecCceEeEEE-CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE
Confidence 0000111234 889888877653 35799999998765
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.18 E-value=1.1e-09 Score=117.99 Aligned_cols=202 Identities=12% Similarity=0.105 Sum_probs=134.0
Q ss_pred cCCCCeEEEEeCCCCCEEEEee-----CCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCC--------
Q 009569 315 GHRKPVFTVSWSPNDHQLLTCG-----QEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDK-------- 381 (532)
Q Consensus 315 ~h~~~v~~l~~s~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-------- 381 (532)
+|...+..++|||||++|+.+. ....|++||+.+++.+... ........++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 3556788899999999888533 2357999999999865431 111113567899 999999888774
Q ss_pred -----cEEEEECCCCe---EEEee-cC-ccCceEEEEEeeCCCEEEEEEC----CCeEEEEECCCCc---eeeeecCCce
Q 009569 382 -----SICLWDLDGRE---LESWK-GQ-KTLRISDMAITDDGKRIISICR----EAAILLLDREANF---ERWIEEEEVI 444 (532)
Q Consensus 382 -----~i~iwd~~~~~---~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~~----dg~I~iwd~~~~~---~~~~~~~~~i 444 (532)
.|++|++.+.. ...+. .. +...+..+.|+|||++|+.... ...|+++|+.+.. ..+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 39999987532 22222 22 2335788999999998866543 3589999998763 4445555555
Q ss_pred eEEEEcCCCCEEEEEec----CCeEEEEecCCCCc-ceeEEeccccceEEEEEccCCCCCcEEEEEeC-CC--cEEEEeC
Q 009569 445 TSFSLSKDNKYLLVNLI----NQEIHLWSIESDPK-LVSRYKGHKRARFVIRSCFGGFEQAFIASGSE-DS--QVNIFLS 516 (532)
Q Consensus 445 ~~~~~sp~~~~l~~~~~----dg~i~iwd~~~~~~-~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~-dg--~i~iw~~ 516 (532)
... +++++..|+..+. .+.|..+|+.++.. ....+..|.... + .| ++++++|+.... ++ .|++|++
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~--~~-s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV--L--TV-HSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC--E--EE-EEETTEEEEEEEETTEEEEEEECT
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE--E--EE-EEECCEEEEEEEECCeeEEEEEEC
Confidence 554 6677766655443 25799999987621 235566666553 2 34 778887776655 44 6899999
Q ss_pred CCCCceee
Q 009569 517 FSPFAKKI 524 (532)
Q Consensus 517 ~~~~~~~~ 524 (532)
.++....+
T Consensus 358 ~g~~~~~l 365 (693)
T 3iuj_A 358 EGKRVREV 365 (693)
T ss_dssp TSCEEEEE
T ss_pred CCCeeEEe
Confidence 87654444
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.18 E-value=1.5e-08 Score=100.08 Aligned_cols=220 Identities=16% Similarity=0.132 Sum_probs=147.8
Q ss_pred cCCCEEEE-EeCCCeEEEEEeecC-CeeEEEEEee-------cCCCCeEEEEeCCCCCEEEEeeCC------CcEEEEEC
Q 009569 282 HDGKYLAS-SSKDQSAIIWEVKED-GQVSLKHRLS-------GHRKPVFTVSWSPNDHQLLTCGQE------EAIRRWDV 346 (532)
Q Consensus 282 ~~g~~las-~s~dg~i~iwd~~~~-~~~~~~~~~~-------~h~~~v~~l~~s~~~~~l~s~~~d------g~i~iwd~ 346 (532)
+++++|+. +..+++|.++|+.+. ...+...++. .....-..+..+|+| .++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 77887765 667889999999643 3345555552 111234567889999 77766555 78999999
Q ss_pred CCCcEEEEeeccC---CceEEEEEeeCCCeEEEEe-------------------CCCcEEEEECCCCeEEEeecCc--cC
Q 009569 347 NSGECLHVYEKTG---VGLISCGWFLDGGGIFAGM-------------------TDKSICLWDLDGRELESWKGQK--TL 402 (532)
Q Consensus 347 ~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~--~~ 402 (532)
.+++.+..+.... ..-+.+.|+|+++.+++.. ...+|.+||+.++++....... ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 9999998887332 2234588899999888874 3689999999877655443331 12
Q ss_pred ceEEEEE--eeCCCEEEEEE------CCCeEEEEECCCCc---eeee--ec-----------------CCceeEEEEcCC
Q 009569 403 RISDMAI--TDDGKRIISIC------REAAILLLDREANF---ERWI--EE-----------------EEVITSFSLSKD 452 (532)
Q Consensus 403 ~v~~~~~--s~~~~~l~~~~------~dg~I~iwd~~~~~---~~~~--~~-----------------~~~i~~~~~sp~ 452 (532)
....+.| +|+++++++++ .+++|.+|....+. ...+ .. ......|.+|||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 4556656 99999888777 45688776655433 1110 00 245788999999
Q ss_pred CCEEEEEec-CCeEEEEecCCC--CcceeEEecc-----------c----cceEEEEEccCCCCCcEEEEEe
Q 009569 453 NKYLLVNLI-NQEIHLWSIESD--PKLVSRYKGH-----------K----RARFVIRSCFGGFEQAFIASGS 506 (532)
Q Consensus 453 ~~~l~~~~~-dg~i~iwd~~~~--~~~~~~~~~~-----------~----~~~~~i~~~~~s~d~~~l~sgs 506 (532)
|++|+++.. .+.|.+||+... .+++..+... . .+ -.+.+ +|||++|+++.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggP---r~~~l-SpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAP---QMLEI-SRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCC---CCEEE-CTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCC---CEEEE-cCCCCEEEEEc
Confidence 999988765 678999998633 1344444322 0 11 11233 89999999887
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.17 E-value=2.1e-09 Score=103.46 Aligned_cols=197 Identities=8% Similarity=0.037 Sum_probs=132.3
Q ss_pred EEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEE-Eeec-CCCCeEEEEeCCCCCEEEE----eeC--
Q 009569 266 QILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKH-RLSG-HRKPVFTVSWSPNDHQLLT----CGQ-- 337 (532)
Q Consensus 266 ~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~-~~~~-h~~~v~~l~~s~~~~~l~s----~~~-- 337 (532)
..+..+...+..++++++|+++++...++.|.+|+.. + .+..+. ...+ ....+.++++.|+|++.++ |..
T Consensus 79 ~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g-~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~ 156 (305)
T 3dr2_A 79 DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G-QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKP 156 (305)
T ss_dssp EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S-CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCG
T ss_pred EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C-CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccc
Confidence 4445566778999999999977766667889999875 3 332221 1111 1234678999999998886 332
Q ss_pred -----------CCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCC------CcEEEEECCCCeEE---Eee
Q 009569 338 -----------EEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTD------KSICLWDLDGRELE---SWK 397 (532)
Q Consensus 338 -----------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~---~~~ 397 (532)
.+.|..||..+++..... .......++|+|+++.++++... +.|.+|++.+..+. .+.
T Consensus 157 ~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~ 234 (305)
T 3dr2_A 157 SQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA 234 (305)
T ss_dssp GGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEE
T ss_pred ccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE
Confidence 256888887777654433 33456789999999988877665 78999998754321 111
Q ss_pred cCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCceeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEe
Q 009569 398 GQKTLRISDMAITDDGKRIISICREAAILLLDREANFERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWS 469 (532)
Q Consensus 398 ~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd 469 (532)
.........++++++|++.++ +. +.|.+||........+.....+.+++|+|+++.|++++.+ .++.++
T Consensus 235 ~~~~~~pdgi~~d~~G~lwv~-~~-~gv~~~~~~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~-~l~~~~ 303 (305)
T 3dr2_A 235 SVPDGLPDGFCVDRGGWLWSS-SG-TGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGGP-CLWMLP 303 (305)
T ss_dssp CCSSSCCCSEEECTTSCEEEC-CS-SEEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEEEETT-EEEEEE
T ss_pred ECCCCCCCeEEECCCCCEEEe-cC-CcEEEECCCCCEEEEEECCCceeEEEEeCCCCEEEEEcCC-eEEEEE
Confidence 112234667899999995444 44 4599999865553333334468999999999999888865 444444
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.15 E-value=1.8e-11 Score=121.43 Aligned_cols=189 Identities=15% Similarity=0.021 Sum_probs=106.9
Q ss_pred CCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCC-c
Q 009569 283 DGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGV-G 361 (532)
Q Consensus 283 ~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~ 361 (532)
++..+++++.||.|+.||..++.. ...+.. ..+.+..+..++..+++++.|+.|+.||..+|+.+..+..+.. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~---~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI---KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE---EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE---EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 677899999999999999988743 344443 4454555556777888888999999999999987766543311 1
Q ss_pred eE-EEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCceeeeec
Q 009569 362 LI-SCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANFERWIEE 440 (532)
Q Consensus 362 i~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~~~~~~~ 440 (532)
+. +..+. ++..+++++.++.++.||.++++.......+. ...++|++..+++++.++.|+.||.++++......
T Consensus 83 ~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 83 VQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred cccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 10 11111 34567788889999999998766543332221 23456788899999999999999999887222111
Q ss_pred CCceeEEEEcCCC---CEEEEEecCCeEEEEecCCCCcceeEEec
Q 009569 441 EEVITSFSLSKDN---KYLLVNLINQEIHLWSIESDPKLVSRYKG 482 (532)
Q Consensus 441 ~~~i~~~~~sp~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 482 (532)
........++++. ..+++++.+|.|+.||..++ +.+.++..
T Consensus 158 ~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG-~~~W~~~~ 201 (369)
T 2hz6_A 158 YFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG-DVLWIQNY 201 (369)
T ss_dssp EEEECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC-CEEEEEEC
T ss_pred cccccCccccCCccccceEEEECCCCEEEEEECCCC-cEEEEecC
Confidence 1112333444432 56777888999999999988 66666653
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.13 E-value=3.7e-08 Score=95.77 Aligned_cols=190 Identities=13% Similarity=0.053 Sum_probs=126.5
Q ss_pred eEEEEeCCCCC-EEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeec
Q 009569 320 VFTVSWSPNDH-QLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKG 398 (532)
Q Consensus 320 v~~l~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 398 (532)
..+..|+|++. ++++...++.|..||..+++.. .+. ....+.++.|.++++++++. . ..|.+||..++.+..+..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEee
Confidence 45778999754 5555556789999999887643 333 34578999999999876654 4 459999998776655433
Q ss_pred Cc----cCceEEEEEeeCCCEEEEEEC------CCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCEEEEE-ecCCeEE
Q 009569 399 QK----TLRISDMAITDDGKRIISICR------EAAILLLDREANF-ERWIEEEEVITSFSLSKDNKYLLVN-LINQEIH 466 (532)
Q Consensus 399 ~~----~~~v~~~~~s~~~~~l~~~~~------dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~-~~dg~i~ 466 (532)
.. ...+.+++++|+|+++++... .+.|..+| ++. ..+.........++|+|+++.++++ +.++.|.
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 21 236899999999997665442 25677777 444 3333344457799999999877655 4568999
Q ss_pred EEecC--CC-C----cceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 467 LWSIE--SD-P----KLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 467 iwd~~--~~-~----~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
+||+. ++ . +.+..+...... .-.+++ +++|.+.++...++.|.+|+...
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~--p~gi~~-d~~G~lwva~~~~~~v~~~d~~g 260 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGG--MDGSVC-DAEGHIWNARWGEGAVDRYDTDG 260 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSE--EEEEEE-CTTSCEEEEEETTTEEEEECTTC
T ss_pred EEEcccccCCcccCceEEEECCCCCCC--CCeeEE-CCCCCEEEEEeCCCEEEEECCCC
Confidence 99985 33 1 111122211222 223444 78898777776778999999843
No 223
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.12 E-value=2.2e-08 Score=98.22 Aligned_cols=231 Identities=10% Similarity=0.044 Sum_probs=152.0
Q ss_pred EccCCCEEEEEeC-----CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee----------CCCcEEEE
Q 009569 280 FSHDGKYLASSSK-----DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG----------QEEAIRRW 344 (532)
Q Consensus 280 ~s~~g~~las~s~-----dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~----------~dg~i~iw 344 (532)
..|+++.+++... ++.|.+.|..+. +.+..+.....+ . +.++|||+++++++ .++.|.+|
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~---~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAG---RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTT---EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCC---eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 4578887776654 679999999876 444555544445 4 99999999888776 35789999
Q ss_pred ECCCCcEEEEeeccC-------CceEEEEEeeCCCeEEEEeC--CCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCE
Q 009569 345 DVNSGECLHVYEKTG-------VGLISCGWFLDGGGIFAGMT--DKSICLWDLDGRELESWKGQKTLRISDMAITDDGKR 415 (532)
Q Consensus 345 d~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 415 (532)
|..+++.+..+.-.. .....+.++|||++++++.. ++.|.++|+.++++........ . ...+....+.
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~ 191 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDT 191 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCce
Confidence 999999888775322 24567899999999998874 6899999999887765553322 2 2233334567
Q ss_pred EEEEECCCeEEEEECCC-Cce-e----eee-cCCce-eEEEEc-CCCCEEEEEecCCeEEEEecCCCC-cceeEEe----
Q 009569 416 IISICREAAILLLDREA-NFE-R----WIE-EEEVI-TSFSLS-KDNKYLLVNLINQEIHLWSIESDP-KLVSRYK---- 481 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~-~~~-~----~~~-~~~~i-~~~~~s-p~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~---- 481 (532)
+++.+.||.+.+.++.+ ++. . .+. ...++ ....|. ++|+++++ +.+|.|++.|+.+.. +.+..+.
T Consensus 192 ~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~v-s~~g~V~v~d~~~~~~~v~~~~~~~~~ 270 (386)
T 3sjl_D 192 FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWP-TYTGKIHQIDLSSGDAKFLPAVEALTE 270 (386)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEE-BTTSEEEEEECTTSSCEECCCEESSCH
T ss_pred eEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEE-eCCCEEEEEECCCCcceeecceecccc
Confidence 77888899999999876 442 1 110 11222 124554 67876664 448999999997652 2333332
Q ss_pred -----c-cccceEEEEEccCCCCCcEEEEEeC----------CCcEEEEeCCCCCce
Q 009569 482 -----G-HKRARFVIRSCFGGFEQAFIASGSE----------DSQVNIFLSFSPFAK 522 (532)
Q Consensus 482 -----~-~~~~~~~i~~~~~s~d~~~l~sgs~----------dg~i~iw~~~~~~~~ 522 (532)
+ ....... +.+ +++++.++.... .+.|.+.|+.+.+..
T Consensus 271 ~~~~~g~~p~g~q~--~a~-~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~ 324 (386)
T 3sjl_D 271 AERADGWRPGGWQQ--VAY-HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL 324 (386)
T ss_dssp HHHHTTEEECSSSC--EEE-ETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE
T ss_pred ccccccccCCCcce--eeE-CCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEE
Confidence 0 0001011 222 678888777643 257999999987653
No 224
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.10 E-value=2e-08 Score=102.80 Aligned_cols=239 Identities=10% Similarity=0.039 Sum_probs=163.2
Q ss_pred cCCCEEEEEe-CCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEe-C-CCCCEEEEee------------------CCCc
Q 009569 282 HDGKYLASSS-KDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSW-S-PNDHQLLTCG------------------QEEA 340 (532)
Q Consensus 282 ~~g~~las~s-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~-s-~~~~~l~s~~------------------~dg~ 340 (532)
+||+++.... .++.|.+.|+.+....+.+ .+. .......+++ + |++.++++++ .++.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii-~ip-~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAIL-EIP-NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEE-ECS-SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEE-eCC-CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 3788877655 4567999999876332222 332 2245788887 5 8999998885 2457
Q ss_pred EEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCC--------------------------------------c
Q 009569 341 IRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDK--------------------------------------S 382 (532)
Q Consensus 341 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------------------------------------~ 382 (532)
+.++|..+.+.+..+.-.. ....++++|+|+++++++.+. .
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 9999999998888776433 456788999999999887543 3
Q ss_pred EEEEECCC--C-e-EEEeecCccCceEEEEEeeCCCEEEEEE-CCCeEEEEECCCCc-------------eeeeecCCce
Q 009569 383 ICLWDLDG--R-E-LESWKGQKTLRISDMAITDDGKRIISIC-REAAILLLDREANF-------------ERWIEEEEVI 444 (532)
Q Consensus 383 i~iwd~~~--~-~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~iwd~~~~~-------------~~~~~~~~~i 444 (532)
|.+.|.++ + . +..+.... ...++.++|||+++++++ .+.+|.++|+.+.. ..........
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~--~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP 333 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIAN--NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP 333 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEES--SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE
T ss_pred EEEEeCcccCCceeEEEEecCC--CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc
Confidence 66677765 2 2 22232222 567899999999887776 67899999998652 1122334567
Q ss_pred eEEEEcCCCCEEEEEecCCeEEEEecCCC---------CcceeEEeccccceEEEEE--ccCCCCCcEEEEEeC---CCc
Q 009569 445 TSFSLSKDNKYLLVNLINQEIHLWSIESD---------PKLVSRYKGHKRARFVIRS--CFGGFEQAFIASGSE---DSQ 510 (532)
Q Consensus 445 ~~~~~sp~~~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~~~~i~~--~~~s~d~~~l~sgs~---dg~ 510 (532)
..++|+|+|...++.-.|++|.+||+... .+.+.++..|-.+...... .-.+|||++|+++.. |..
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccc
Confidence 88999999944455667999999999761 2677777777554222111 123899999998754 332
Q ss_pred ----------EEEEeCCCCCceeee
Q 009569 511 ----------VNIFLSFSPFAKKIK 525 (532)
Q Consensus 511 ----------i~iw~~~~~~~~~~~ 525 (532)
-.++|+.+++...+.
T Consensus 414 ~~~gp~~~~~~ql~dis~~~m~lv~ 438 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGDKMVLVH 438 (595)
T ss_dssp CCCCSSCCEEEEEEECSSSSCEEEE
T ss_pred ccCCCCCCCcceEEEcCCCcEEEEE
Confidence 178999776655443
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.08 E-value=3.3e-09 Score=104.25 Aligned_cols=215 Identities=12% Similarity=0.010 Sum_probs=134.9
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEe----------CCCeEEEEEeecCCeeEEEEEeecC-------CCCeEEEE
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSS----------KDQSAIIWEVKEDGQVSLKHRLSGH-------RKPVFTVS 324 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s----------~dg~i~iwd~~~~~~~~~~~~~~~h-------~~~v~~l~ 324 (532)
.+.+..+..-..+ .+.++|||++++++. .++.|.+||..+... ...+..+ ......+.
T Consensus 56 ~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v---v~~I~v~~~~~~~~g~~P~~ia 130 (368)
T 1mda_H 56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP---IADIELPDAPRFSVGPRVHIIG 130 (368)
T ss_dssp TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE---EEEEEETTSCSCCBSCCTTSEE
T ss_pred CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE---EEEEECCCccccccCCCcceEE
Confidence 4666666644555 799999999888875 368899999997743 3444322 12345789
Q ss_pred eCCCCCEEEEeeC--CCcEEE--EECCCCcEEEEeeccC------------------CceEEEE----------------
Q 009569 325 WSPNDHQLLTCGQ--EEAIRR--WDVNSGECLHVYEKTG------------------VGLISCG---------------- 366 (532)
Q Consensus 325 ~s~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~~~------------------~~i~~~~---------------- 366 (532)
++|||++++++.. +..|.+ +|..+ +..+.... +.+..+.
T Consensus 131 ~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t 207 (368)
T 1mda_H 131 NCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT 207 (368)
T ss_dssp ECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC
T ss_pred EcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEee
Confidence 9999999998875 457888 88866 22222100 0000000
Q ss_pred ----------EeeCCCeEEEEeCCCcEEEEECCCCe--EEE-eecC------c---cCceEEEEEeeCCCEEEEEEC---
Q 009569 367 ----------WFLDGGGIFAGMTDKSICLWDLDGRE--LES-WKGQ------K---TLRISDMAITDDGKRIISICR--- 421 (532)
Q Consensus 367 ----------~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~-~~~~------~---~~~v~~~~~s~~~~~l~~~~~--- 421 (532)
..+++..++..+. +.+.+.|+.+.. +.. +... . ......++++|+++.++++..
T Consensus 208 ~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~ 286 (368)
T 1mda_H 208 GAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHS 286 (368)
T ss_dssp TTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECS
T ss_pred eeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEecccc
Confidence 0222333333333 566666765422 111 1100 0 001222789999998887643
Q ss_pred ------CCeEEEEECCCCc-eeeeecCCceeEEEEcCCCCE-EEEEe-cCCeEEEEecCCCCcceeEEeccccc
Q 009569 422 ------EAAILLLDREANF-ERWIEEEEVITSFSLSKDNKY-LLVNL-INQEIHLWSIESDPKLVSRYKGHKRA 486 (532)
Q Consensus 422 ------dg~I~iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~-l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~ 486 (532)
++.+.++|..+.+ ...+........++|+|||++ ++++. .++.|.++|+.+. +.+.++.....+
T Consensus 287 ~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~-kvv~~I~vg~~P 359 (368)
T 1mda_H 287 RSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD-QDQSSVELDKGP 359 (368)
T ss_dssp SCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC-EEEEECCCCSCC
T ss_pred CcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCC-cEEEEEECCCCC
Confidence 2366799999987 333333446899999999985 55555 4899999999998 888888766554
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.07 E-value=4.8e-11 Score=118.41 Aligned_cols=183 Identities=10% Similarity=-0.019 Sum_probs=105.5
Q ss_pred CCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeE-EEeecCccCceE-
Q 009569 328 NDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGREL-ESWKGQKTLRIS- 405 (532)
Q Consensus 328 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~v~- 405 (532)
++..+++++.|+.|+.||..+|+.+..+.. ..+.+..+..++..+++++.|+.|+.||.++++. ..+.......+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577899999999999999999999988876 4455555666787888888999999999976543 233221110111
Q ss_pred EEEEeeCCCEEEEEECCCeEEEEECCCCceeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEecccc
Q 009569 406 DMAITDDGKRIISICREAAILLLDREANFERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKR 485 (532)
Q Consensus 406 ~~~~s~~~~~l~~~~~dg~I~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 485 (532)
...+. ++..+++++.++.|+.||..+++......... ...++|++..+++++.++.|+.||..++ +.+..+..+..
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~~dg~v~a~d~~tG-~~~W~~~~~~~ 161 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGRTEYTITMYDTKTR-ELRWNATYFDY 161 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSS-SCCCEEEEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEecCCEEEEEECCCC-CEEEeEecccc
Confidence 11111 34567888889999999999887322211111 2456778889999999999999999988 66655543221
Q ss_pred ceEEEEEccCCCCC---cEEEEEeCCCcEEEEeCCCCCc
Q 009569 486 ARFVIRSCFGGFEQ---AFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 486 ~~~~i~~~~~s~d~---~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
. ...+ ..+. ..+++++.||.|+.||..+++.
T Consensus 162 ~----~~~~-~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 162 A----ASLP-EDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp C----CBCC-CCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred c----Cccc-cCCccccceEEEECCCCEEEEEECCCCcE
Confidence 1 1122 2321 4577788999999999998864
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.05 E-value=1.8e-08 Score=108.00 Aligned_cols=231 Identities=11% Similarity=0.075 Sum_probs=149.0
Q ss_pred CCCEEEEEeCCCeEEEEEeecCCeeEEEEEeec--CCCCeEEEEeCC---CCCEEEEee------CCCcEEEEECCCCcE
Q 009569 283 DGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSG--HRKPVFTVSWSP---NDHQLLTCG------QEEAIRRWDVNSGEC 351 (532)
Q Consensus 283 ~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~--h~~~v~~l~~s~---~~~~l~s~~------~dg~i~iwd~~~~~~ 351 (532)
++..|++++.|+.|..+|..++... ..+.. +......+..+| ++ .++.++ .++.|..||..+|+.
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~---W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRA---WSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEE---EEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEe---eeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 3567888889999999999887533 33322 111111122222 44 444443 368999999999999
Q ss_pred EEEeeccC-------------------------------CceEEEEEeeCCCeEEEEeCCCc------------------
Q 009569 352 LHVYEKTG-------------------------------VGLISCGWFLDGGGIFAGMTDKS------------------ 382 (532)
Q Consensus 352 ~~~~~~~~-------------------------------~~i~~~~~~~~~~~l~~~~~dg~------------------ 382 (532)
+..+.... .....+++.|++..+++++.++.
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~ 275 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLS 275 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTT
T ss_pred EEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 87765210 01125778888889999887763
Q ss_pred -EEEEECCCCeEEEee-cC-cc-------CceEEEEEeeCCC---EEEEEECCCeEEEEECCCCceeeeecC--------
Q 009569 383 -ICLWDLDGRELESWK-GQ-KT-------LRISDMAITDDGK---RIISICREAAILLLDREANFERWIEEE-------- 441 (532)
Q Consensus 383 -i~iwd~~~~~~~~~~-~~-~~-------~~v~~~~~s~~~~---~l~~~~~dg~I~iwd~~~~~~~~~~~~-------- 441 (532)
|..||.++++..-.. .. +. ..+.-.....+|+ .++.++.+|.++++|.++++.......
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 999999877654322 21 11 1122222333565 788899999999999999872210000
Q ss_pred ---------------------------------CceeEEEEcCCCCEEEEEec---------------------------
Q 009569 442 ---------------------------------EVITSFSLSKDNKYLLVNLI--------------------------- 461 (532)
Q Consensus 442 ---------------------------------~~i~~~~~sp~~~~l~~~~~--------------------------- 461 (532)
..-..++++|+..+++++..
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence 00123789999888887633
Q ss_pred ------------------CCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 462 ------------------NQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 462 ------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
+|.|+.||+.++ +.+-++..+..... ..+ ...+.+++.|+.||.|+.||.++|+..
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG-~~~W~~~~~~~~~~---g~~-~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ-QAAWEVPYVTIFNG---GTL-STAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTT-EEEEEEEESSSCCC---CEE-EETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCC-CeEeEccCCCCccC---ccc-eECCCEEEEECCCCcEEEEECCCCccc
Confidence 377999999998 77776665442211 122 346778999999999999999998753
No 228
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.03 E-value=1.3e-07 Score=93.60 Aligned_cols=226 Identities=9% Similarity=0.047 Sum_probs=141.8
Q ss_pred CCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCce
Q 009569 283 DGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGL 362 (532)
Q Consensus 283 ~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i 362 (532)
++..++.++.++.|..+|..++.. ................ .+..++.++.++.|..+|..+|+.+..+.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~---~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTV---AWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCE---EEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE---EEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce
Confidence 455777788899999999987743 2333222211111112 24577888889999999999999887776432211
Q ss_pred -----EEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccC-------ceEEEEEee--CCCEEEEEECCCeEEEE
Q 009569 363 -----ISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTL-------RISDMAITD--DGKRIISICREAAILLL 428 (532)
Q Consensus 363 -----~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-------~v~~~~~s~--~~~~l~~~~~dg~I~iw 428 (532)
..... .+..+++++.++.+..+|..+++..-....... .+..+...| .+..+++++.++.+..+
T Consensus 177 ~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~ 254 (376)
T 3q7m_A 177 SLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTAL 254 (376)
T ss_dssp --CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEE
T ss_pred eecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEE
Confidence 11222 245788888899999999987655332221100 000011111 35678888889999999
Q ss_pred ECCCCceeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCC
Q 009569 429 DREANFERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSED 508 (532)
Q Consensus 429 d~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~d 508 (532)
|..+++............+.. ++..+++++.++.|..+|..++ +.+............ .. ...+..|+.++.+
T Consensus 255 d~~tG~~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG-~~~w~~~~~~~~~~~-~~---~~~~~~l~v~~~~ 327 (376)
T 3q7m_A 255 DLRSGQIMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGG-VTLWTQSDLLHRLLT-SP---VLYNGNLVVGDSE 327 (376)
T ss_dssp ETTTCCEEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTC-CEEEEECTTTTSCCC-CC---EEETTEEEEECTT
T ss_pred ECCCCcEEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCC-cEEEeecccCCCccc-CC---EEECCEEEEEeCC
Confidence 999888444433344445544 3667888888999999999988 665555422111000 01 1124678889999
Q ss_pred CcEEEEeCCCCCce
Q 009569 509 SQVNIFLSFSPFAK 522 (532)
Q Consensus 509 g~i~iw~~~~~~~~ 522 (532)
|.|+++|..+++..
T Consensus 328 g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 328 GYLHWINVEDGRFV 341 (376)
T ss_dssp SEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcEE
Confidence 99999999998653
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.02 E-value=1.4e-08 Score=108.64 Aligned_cols=232 Identities=12% Similarity=0.068 Sum_probs=150.5
Q ss_pred CCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC-CC-CeEEEEeCC--CCCEEEEeeC------CCcEEEEECCCCcEE
Q 009569 283 DGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH-RK-PVFTVSWSP--NDHQLLTCGQ------EEAIRRWDVNSGECL 352 (532)
Q Consensus 283 ~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h-~~-~v~~l~~s~--~~~~l~s~~~------dg~i~iwd~~~~~~~ 352 (532)
++..|++++.|+.+..+|..++.. +..+..+ .. ....+.-+| .+..++.++. ++.|+.+|..+|+.+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~---~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKE---VWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCE---EEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCE---EeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence 456788888999999999988743 3444333 10 000011111 2345555543 689999999999998
Q ss_pred EEeeccCCc--------------------------------eEEEEEeeCCCeEEEEeCCC-------------------
Q 009569 353 HVYEKTGVG--------------------------------LISCGWFLDGGGIFAGMTDK------------------- 381 (532)
Q Consensus 353 ~~~~~~~~~--------------------------------i~~~~~~~~~~~l~~~~~dg------------------- 381 (532)
..+...... ...++++|++..+++++.++
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 777542211 12467888888999887664
Q ss_pred cEEEEECCCCeEEEee-cC-cc-------CceEEEEEeeCC---CEEEEEECCCeEEEEECCCCceeeeecC--------
Q 009569 382 SICLWDLDGRELESWK-GQ-KT-------LRISDMAITDDG---KRIISICREAAILLLDREANFERWIEEE-------- 441 (532)
Q Consensus 382 ~i~iwd~~~~~~~~~~-~~-~~-------~~v~~~~~s~~~---~~l~~~~~dg~I~iwd~~~~~~~~~~~~-------- 441 (532)
.|..+|.++++..-.. .. +. ....-+....+| ..++.++.+|.++++|..+++.......
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 4999999877654332 11 11 122223344477 6789999999999999999872211110
Q ss_pred -----Cce------------------------eEEEEcCCCCEEEEEecC------------------------------
Q 009569 442 -----EVI------------------------TSFSLSKDNKYLLVNLIN------------------------------ 462 (532)
Q Consensus 442 -----~~i------------------------~~~~~sp~~~~l~~~~~d------------------------------ 462 (532)
.++ ..++++|++.++++...+
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 001 257899998888886542
Q ss_pred -------------CeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 463 -------------QEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 463 -------------g~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
|.|..||+.++ +.+-++...... .. ..+ ..++..++.++.||.+++||..+++..
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG-~~~W~~~~~~~~-~~--g~~-~~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQ-KAAWSVEHVSPW-NG--GTL-TTAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTT-EEEEEEEESSSC-CC--CEE-EETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccccCCCCCccEEEEEeCCCC-cEEeecCCCCCC-cC--cce-EeCCCEEEEECCCCcEEEEECCCCcee
Confidence 78999999998 666666533211 11 112 456678888999999999999998754
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.00 E-value=2.9e-07 Score=86.48 Aligned_cols=232 Identities=9% Similarity=-0.050 Sum_probs=142.6
Q ss_pred CEEEEEeCCCeEEEEEeecCCee--EEEEEeecCCCCeEEEEeCCCCCEEEEee-CCCcEEEEECCCCcEEEEeeccCCc
Q 009569 285 KYLASSSKDQSAIIWEVKEDGQV--SLKHRLSGHRKPVFTVSWSPNDHQLLTCG-QEEAIRRWDVNSGECLHVYEKTGVG 361 (532)
Q Consensus 285 ~~las~s~dg~i~iwd~~~~~~~--~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~ 361 (532)
.+|..+.. +.|+.+++...... .....+......+..++|++++..|+.+. .++.|..++...+.....+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 45555543 47888887643210 00111111123467899999766665554 4679999999766544333333356
Q ss_pred eEEEEEeeCCCeEEEE-eCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC---CCeEEEEECCCCcee-
Q 009569 362 LISCGWFLDGGGIFAG-MTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR---EAAILLLDREANFER- 436 (532)
Q Consensus 362 i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~I~iwd~~~~~~~- 436 (532)
...+++.+++..++.+ ...+.|.++++++................++++|++..++.+.. .+.|..++.......
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~ 160 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRI 160 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEE
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEE
Confidence 7899999976655554 45678999999865433333322236789999997666666554 368999988765422
Q ss_pred ee-ecCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEE
Q 009569 437 WI-EEEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIF 514 (532)
Q Consensus 437 ~~-~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw 514 (532)
+. ........++++|++..|+++. ..+.|.++|+... .....+.+...+ ..++. . ++.++++....+.|.++
T Consensus 161 ~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~-~~~~~~~~~~~P---~gi~~-d-~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 161 LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP-GRRKVLEGLQYP---FAVTS-Y-GKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE-EEEEEEECCCSE---EEEEE-E-TTEEEEEETTTTEEEEE
T ss_pred EEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC-ceEEEecCCCCc---eEEEE-e-CCEEEEEECCCCeEEEE
Confidence 22 2234578999999877666554 4678999998754 333333332222 22332 2 34444444456899999
Q ss_pred eCCCCCcee
Q 009569 515 LSFSPFAKK 523 (532)
Q Consensus 515 ~~~~~~~~~ 523 (532)
+..+++...
T Consensus 235 d~~~g~~~~ 243 (267)
T 1npe_A 235 DLAISKEMD 243 (267)
T ss_dssp ETTTTEEEE
T ss_pred eCCCCCceE
Confidence 999876443
No 231
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.98 E-value=1.1e-07 Score=94.94 Aligned_cols=228 Identities=10% Similarity=0.044 Sum_probs=148.7
Q ss_pred CCCEEEEEeC-C----CeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee----------CCCcEEEEECC
Q 009569 283 DGKYLASSSK-D----QSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG----------QEEAIRRWDVN 347 (532)
Q Consensus 283 ~g~~las~s~-d----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~----------~dg~i~iwd~~ 347 (532)
+++.++++.. + +.|.++|..+. +.+..+..-..+ .+.++||+++++++. .++.|.++|..
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~---~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTG---RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTT---EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCC---EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 5554444433 2 69999999876 444555544455 899999999888876 36789999999
Q ss_pred CCcEEEEeecc-------CCceEEEEEeeCCCeEEEEeC--CCcEEEEECCCCeEEEeecCccCceEEEEEeeCC-CEEE
Q 009569 348 SGECLHVYEKT-------GVGLISCGWFLDGGGIFAGMT--DKSICLWDLDGRELESWKGQKTLRISDMAITDDG-KRII 417 (532)
Q Consensus 348 ~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~ 417 (532)
+++.+..+.-. ......+.++|||++++++.. ++.|.+.|+.+.++........ . ....|++ ..++
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v 233 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFY 233 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEE
T ss_pred CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEE
Confidence 99988877532 233567899999999999874 5789999999877655443321 1 2334443 5666
Q ss_pred EEECCCeEEEEECCCCceee-----e-ecCCc-eeEEEEcCCCCEEEEEecCCeEEEEecCCCCc-ceeEEecc------
Q 009569 418 SICREAAILLLDREANFERW-----I-EEEEV-ITSFSLSKDNKYLLVNLINQEIHLWSIESDPK-LVSRYKGH------ 483 (532)
Q Consensus 418 ~~~~dg~I~iwd~~~~~~~~-----~-~~~~~-i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~------ 483 (532)
+.+.||.+.+.+..+++... + ....+ ...+.+++++..++.....+.+.+.|+.+... .+..+...
T Consensus 234 ~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~ 313 (426)
T 3c75_H 234 MNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA 313 (426)
T ss_dssp EEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG
T ss_pred EEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc
Confidence 77788888888885544211 1 11111 12456899988887778889999999865411 11111100
Q ss_pred ----ccceEEEEEccCCCCCcEEEEEeC----------CCcEEEEeCCCCCce
Q 009569 484 ----KRARFVIRSCFGGFEQAFIASGSE----------DSQVNIFLSFSPFAK 522 (532)
Q Consensus 484 ----~~~~~~i~~~~~s~d~~~l~sgs~----------dg~i~iw~~~~~~~~ 522 (532)
...... +.+ +++++.++.... ++.|.++|..+.+..
T Consensus 314 ~g~~p~g~~~--va~-s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv 363 (426)
T 3c75_H 314 DDWRPGGWQQ--TAY-HRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI 363 (426)
T ss_dssp GTEEECSSSC--EEE-EGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE
T ss_pred cccccCCcee--eEE-cCCCCEEEEEecccccccccCCCCEEEEEECCCCeEE
Confidence 000001 233 788887766542 357999999987643
No 232
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.98 E-value=2e-07 Score=90.22 Aligned_cols=237 Identities=10% Similarity=-0.011 Sum_probs=149.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeec-----------------CCCCeEEEEeCC-CCCEEEEe
Q 009569 274 EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSG-----------------HRKPVFTVSWSP-NDHQLLTC 335 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~-----------------h~~~v~~l~~s~-~~~~l~s~ 335 (532)
...+++|.++|+++.++..++.|..|+..++ .+........ ....+..+++.+ +++ |+.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNS-GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTT-CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCC-ceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 4567889999997888888999999987643 2222211100 013478899997 554 5555
Q ss_pred eCCCcEEEEECCCCcEEEEeec-----cCCceEEEEEee-CCCeEEEEeC-----------------CCcEEEEECCCCe
Q 009569 336 GQEEAIRRWDVNSGECLHVYEK-----TGVGLISCGWFL-DGGGIFAGMT-----------------DKSICLWDLDGRE 392 (532)
Q Consensus 336 ~~dg~i~iwd~~~~~~~~~~~~-----~~~~i~~~~~~~-~~~~l~~~~~-----------------dg~i~iwd~~~~~ 392 (532)
...+.|..+|..++.. ..+.. .......+++.+ +|+..++-.. ++.|..||..++.
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 5555688888776542 22211 123467899999 8876666432 3679999988766
Q ss_pred EEEeecCccCceEEEEEeeCCCEEEEE-ECCCeEEEEECCCCc----eeeeecCCceeEEEEcCCCCEEEEEec------
Q 009569 393 LESWKGQKTLRISDMAITDDGKRIISI-CREAAILLLDREANF----ERWIEEEEVITSFSLSKDNKYLLVNLI------ 461 (532)
Q Consensus 393 ~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~I~iwd~~~~~----~~~~~~~~~i~~~~~sp~~~~l~~~~~------ 461 (532)
........ .....++++|+++.++++ +..+.|.+|++.... ..+..... ...++++++|++.++...
T Consensus 177 ~~~~~~~~-~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 177 TTLLLKEL-HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNM 254 (322)
T ss_dssp EEEEEEEE-SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSST
T ss_pred EEEeccCC-ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccc
Confidence 55443221 256789999999876665 456899999987532 22222233 788999999987666544
Q ss_pred ----CCeEEEEecCCCCcceeEEeccccc--eEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 462 ----NQEIHLWSIESDPKLVSRYKGHKRA--RFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 462 ----dg~i~iwd~~~~~~~~~~~~~~~~~--~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
.+.|..+|.. + +.+..+...... .....+++ .++.+.++...++.|.++++...
T Consensus 255 ~~~~~~~v~~~d~~-G-~~~~~~~~~~g~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 255 HGRVDPKGIKFDEF-G-NILEVIPLPPPFAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp TSCEEEEEEEECTT-S-CEEEEEECCTTTTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC---
T ss_pred cCCCccEEEEECCC-C-CEEEEEECCCCCccccceEEEE--eCCEEEEeecCCCceEEEecccc
Confidence 4668888864 3 566666543210 01112233 35666666667888999988653
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.93 E-value=3.8e-08 Score=96.37 Aligned_cols=193 Identities=11% Similarity=0.063 Sum_probs=129.5
Q ss_pred cccccEEEEEEccCCCEEEEEeC-----CCeEEEEEeecCCeeEEEEEeec------CCCCeEEEEeCCCCCEE-EEee-
Q 009569 270 AHSDEVWFLQFSHDGKYLASSSK-----DQSAIIWEVKEDGQVSLKHRLSG------HRKPVFTVSWSPNDHQL-LTCG- 336 (532)
Q Consensus 270 ~h~~~V~~v~~s~~g~~las~s~-----dg~i~iwd~~~~~~~~~~~~~~~------h~~~v~~l~~s~~~~~l-~s~~- 336 (532)
+|-..+..++++++|+++++-.. ++.|.+||..++. ....+.. +...+..+++++++..+ ++-.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~---~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~ 140 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ---LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPA 140 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE---EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECC
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe---EEEEEECChhhcccccccceEEEecCCCEEEEEcCc
Confidence 46678999999999987665543 5789999998653 2233321 22456889999865444 4444
Q ss_pred --CCCcEEEEECCCCcEEEEeecc-----------------------------CCceEEEEEeeCCCeEEEEeCCC-cEE
Q 009569 337 --QEEAIRRWDVNSGECLHVYEKT-----------------------------GVGLISCGWFLDGGGIFAGMTDK-SIC 384 (532)
Q Consensus 337 --~dg~i~iwd~~~~~~~~~~~~~-----------------------------~~~i~~~~~~~~~~~l~~~~~dg-~i~ 384 (532)
.++.|.+||..+++..+.+..| ...+..++|+|+++.++++..++ .++
T Consensus 141 ~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~ 220 (343)
T 2qe8_A 141 PDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMY 220 (343)
T ss_dssp SGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEE
T ss_pred cCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEE
Confidence 5789999999988776655331 02357899999999888887665 555
Q ss_pred EEECC---CCeE--------EEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeeeec--CCceeEEEEc
Q 009569 385 LWDLD---GREL--------ESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWIEE--EEVITSFSLS 450 (532)
Q Consensus 385 iwd~~---~~~~--------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~--~~~i~~~~~s 450 (532)
.++.. ...+ ..... +......++++++|.++++...++.|.+||..++. ...... ...+++++|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~g-~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~ 299 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAELGSKIERYS-EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFG 299 (343)
T ss_dssp EEEHHHHTCTTCCHHHHHTTCEEEE-ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEEC
T ss_pred EEEHHHhcCCCCChhhhhcceEecc-cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEEC
Confidence 55532 1100 00111 11246679999999999988889999999985555 222222 3458899999
Q ss_pred CCCCEEEEEecCCeEE
Q 009569 451 KDNKYLLVNLINQEIH 466 (532)
Q Consensus 451 p~~~~l~~~~~dg~i~ 466 (532)
++++++++.+..+.+.
T Consensus 300 ~~g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 300 SDGYLYFDCNQLHHSA 315 (343)
T ss_dssp TTSCEEEEECCGGGSG
T ss_pred CCCcEEEEeCcccccc
Confidence 9988877776544443
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.93 E-value=7.6e-07 Score=82.69 Aligned_cols=202 Identities=12% Similarity=0.130 Sum_probs=133.3
Q ss_pred ceeEEcccccc--cEEEEEEccCCCEEEEEeC--CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEe-eC
Q 009569 263 QTLQILEAHSD--EVWFLQFSHDGKYLASSSK--DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTC-GQ 337 (532)
Q Consensus 263 ~~~~~l~~h~~--~V~~v~~s~~g~~las~s~--dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~ 337 (532)
+.+.++. |.. ....++|+|++...++.+. ++.|.++|..++..... ..+..+ .....+++. +..|+.+ -.
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~-i~l~~~-~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENI-HKMDDS-YFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEE-EECCTT-CCEEEEEEE--TTEEEEEETT
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEE-EecCCC-cceEEEEEe--CCEEEEEEec
Confidence 4455553 543 3679999998765555443 68999999998743322 112222 222345554 4445444 45
Q ss_pred CCcEEEEECCCCcEEEEeecc-CCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCc-----cCceEEEEEee
Q 009569 338 EEAIRRWDVNSGECLHVYEKT-GVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQK-----TLRISDMAITD 411 (532)
Q Consensus 338 dg~i~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~s~ 411 (532)
++.+.++|..+++.+..+... .. ...+++|++.++++..++.|.++|..+.+........ -..++.+.|.
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred CCEEEEEECCCCcEEEEEECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 789999999999999888643 22 2345668888888888899999999885543333211 1146788888
Q ss_pred CCCEEEEEECCCeEEEEECCCCc-eeeeec--------------CCceeEEEEcCCCCEEEE-EecCCeEEEEecCCC
Q 009569 412 DGKRIISICREAAILLLDREANF-ERWIEE--------------EEVITSFSLSKDNKYLLV-NLINQEIHLWSIESD 473 (532)
Q Consensus 412 ~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~--------------~~~i~~~~~sp~~~~l~~-~~~dg~i~iwd~~~~ 473 (532)
+|..++....++.|.+.|..+++ ...+.. ......++|+|+++.+++ +...+.+...++...
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 77555555468899999999987 222221 135689999999865555 556788888888654
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.92 E-value=1.3e-06 Score=81.98 Aligned_cols=204 Identities=8% Similarity=-0.041 Sum_probs=133.3
Q ss_pred ccEEEEEEccCCCEEE-EEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEe-eCCCcEEEEECCCCc
Q 009569 273 DEVWFLQFSHDGKYLA-SSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTC-GQEEAIRRWDVNSGE 350 (532)
Q Consensus 273 ~~V~~v~~s~~g~~la-s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~iwd~~~~~ 350 (532)
..+..++|++++..|. +-..++.|..++..... . ...+.........+++++++..|+.+ ...+.|.+++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~--~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 112 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-P--TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ 112 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-C--EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-c--EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC
Confidence 4578999999665554 55567899999987432 1 12222233567899999976655554 456789999986543
Q ss_pred EEEEeeccCCceEEEEEeeCCCeEEEEeC---CCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCCeEE
Q 009569 351 CLHVYEKTGVGLISCGWFLDGGGIFAGMT---DKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-REAAIL 426 (532)
Q Consensus 351 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~ 426 (532)
..............++++|++..++.+.. .+.|..+++++................++++|++..|+.+. ..+.|.
T Consensus 113 ~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 113 RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 32223222346789999997666665553 36898999876544333322223688999999877666555 568999
Q ss_pred EEECCCCc-eeeeecCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEec
Q 009569 427 LLDREANF-ERWIEEEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKG 482 (532)
Q Consensus 427 iwd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~ 482 (532)
++|..... ..+.........++.. +..|+++. ..+.|..+|..++ +.+.++..
T Consensus 193 ~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g-~~~~~i~~ 247 (267)
T 1npe_A 193 CLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAIS-KEMDTFHP 247 (267)
T ss_dssp EEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTT-EEEEEECC
T ss_pred EEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCC-CceEEEcc
Confidence 99998655 2333333345667664 44555544 5689999999887 67777653
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.92 E-value=7.7e-08 Score=102.96 Aligned_cols=194 Identities=11% Similarity=0.084 Sum_probs=131.1
Q ss_pred EEEeCCCCCEEEEeeCCC-------------------cEEEEECCCCcEEEEeeccC---------CceEEEEEeeCC--
Q 009569 322 TVSWSPNDHQLLTCGQEE-------------------AIRRWDVNSGECLHVYEKTG---------VGLISCGWFLDG-- 371 (532)
Q Consensus 322 ~l~~s~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~~---------~~i~~~~~~~~~-- 371 (532)
.++++|++..++.+..++ .|..+|.++|+.+..++... ....-+....+|
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~ 326 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP 326 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE
Confidence 467888888888877664 59999999999988876421 122223344477
Q ss_pred -CeEEEEeCCCcEEEEECCCCeEEEeec-Ccc---------C-ce------------------------EEEEEeeCCCE
Q 009569 372 -GGIFAGMTDKSICLWDLDGRELESWKG-QKT---------L-RI------------------------SDMAITDDGKR 415 (532)
Q Consensus 372 -~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~---------~-~v------------------------~~~~~s~~~~~ 415 (532)
..++.++.+|.++++|.+++++..... ... + .+ ..++++|++.+
T Consensus 327 ~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~ 406 (677)
T 1kb0_A 327 RKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL 406 (677)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE
T ss_pred eeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE
Confidence 678999999999999998766543221 100 0 01 25788998888
Q ss_pred EEEEECC-------------------------------------------CeEEEEECCCCc-eeeeecCCceeEEEEcC
Q 009569 416 IISICRE-------------------------------------------AAILLLDREANF-ERWIEEEEVITSFSLSK 451 (532)
Q Consensus 416 l~~~~~d-------------------------------------------g~I~iwd~~~~~-~~~~~~~~~i~~~~~sp 451 (532)
+++...+ +.|..||+.+++ .....+..++....++.
T Consensus 407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~ 486 (677)
T 1kb0_A 407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTT 486 (677)
T ss_dssp EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE
T ss_pred EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEe
Confidence 8776432 789999999988 33334455566666777
Q ss_pred CCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcE-EEEEeC----------------CCcEEEE
Q 009569 452 DNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAF-IASGSE----------------DSQVNIF 514 (532)
Q Consensus 452 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~-l~sgs~----------------dg~i~iw 514 (532)
++..+++++.||.+++||..++ +.+.++...... ...-+.| ..+|+. +++.+. .+.+.+|
T Consensus 487 ~g~~v~~g~~dg~l~a~D~~tG-~~lw~~~~~~~~-~~~p~~y-~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f 563 (677)
T 1kb0_A 487 AGNVVFQGTADGRLVAYHAATG-EKLWEAPTGTGV-VAAPSTY-MVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTF 563 (677)
T ss_dssp TTTEEEEECTTSEEEEEETTTC-CEEEEEECSSCC-CSCCEEE-EETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCC-ceeeeeeCCCCc-ccCCEEE-EeCCEEEEEEeccCCccccccccccccCCCCeEEEE
Confidence 8889999999999999999998 888888754321 1111223 456654 443222 3678888
Q ss_pred eCCC
Q 009569 515 LSFS 518 (532)
Q Consensus 515 ~~~~ 518 (532)
.+..
T Consensus 564 ~l~~ 567 (677)
T 1kb0_A 564 VVGG 567 (677)
T ss_dssp EETC
T ss_pred eccc
Confidence 8763
No 237
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.90 E-value=3.2e-06 Score=81.10 Aligned_cols=235 Identities=10% Similarity=0.045 Sum_probs=142.3
Q ss_pred cceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCC--
Q 009569 262 SQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEE-- 339 (532)
Q Consensus 262 ~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg-- 339 (532)
.+.+..+..+ .....++|+++|+++++-..++.|..||... ....... .......+++.++++++++.....
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g--~~~~~~~---~~~~p~gia~~~dG~l~vad~~~~~~ 95 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG--NQQIHAT---VEGKVSGLAFTSNGDLVATGWNADSI 95 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC--CEEEEEE---CSSEEEEEEECTTSCEEEEEECTTSC
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC--ceEEEEe---CCCCceeEEEcCCCcEEEEeccCCcc
Confidence 4445555433 4577899999999777777889998888763 2222222 234688999999998666554332
Q ss_pred cEEEEECCCCcEEEEeecc-CCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEe--ec--------CccCceEEEE
Q 009569 340 AIRRWDVNSGECLHVYEKT-GVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESW--KG--------QKTLRISDMA 408 (532)
Q Consensus 340 ~i~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~--------~~~~~v~~~~ 408 (532)
.|..+|..+++........ ......++..+++..+++-..++.|+.+|..++....+ .. ......+.+
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 4777787788754333221 22234455455544444444688999999876432111 10 111134555
Q ss_pred EeeCCCEEEEEE-CCCeEEEEECCC-Cc---eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCccee--EEe
Q 009569 409 ITDDGKRIISIC-REAAILLLDREA-NF---ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVS--RYK 481 (532)
Q Consensus 409 ~s~~~~~l~~~~-~dg~I~iwd~~~-~~---~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~ 481 (532)
+|+++.++.+. ..+.|..||+.. +. ............++++++|+++++....+.|.++|.. + +... .+.
T Consensus 175 -s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G-~~~~~~~~~ 251 (306)
T 2p4o_A 175 -KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-R-STTIIAQAE 251 (306)
T ss_dssp -EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-C-CEEEEECGG
T ss_pred -CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-C-CEEEEeecc
Confidence 88887666555 568999999875 22 2222222456789999999887777777899999975 3 3322 222
Q ss_pred ccccceEEEEEccCC--CCCcEEEEEeCC
Q 009569 482 GHKRARFVIRSCFGG--FEQAFIASGSED 508 (532)
Q Consensus 482 ~~~~~~~~i~~~~~s--~d~~~l~sgs~d 508 (532)
..... ...++|.. +++..|+..+..
T Consensus 252 ~~~~~--p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 252 QGVIG--STAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp GTCTT--EEEEEECCSTTTTTEEEEEECT
T ss_pred cccCC--ceEEEEecccCCCCEEEEECCC
Confidence 22122 34566633 787777666543
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.90 E-value=5.7e-07 Score=89.01 Aligned_cols=215 Identities=12% Similarity=0.108 Sum_probs=137.2
Q ss_pred CCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCe-----EEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeecc
Q 009569 284 GKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPV-----FTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKT 358 (532)
Q Consensus 284 g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v-----~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 358 (532)
+..++.++.++.|..+|..++... .......... ..... .+..++.++.++.|..+|..+|+.+......
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~---W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~ 217 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVK---WTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRIS 217 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEE---EEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEcCCCeEEEEECCCCcEE---EEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecc
Confidence 446777888999999999876432 3322221110 11111 2457788888999999999999988766532
Q ss_pred CCc----------e-EEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEE
Q 009569 359 GVG----------L-ISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILL 427 (532)
Q Consensus 359 ~~~----------i-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~i 427 (532)
... + ..... .+..+++++.++.+..+|.++++..-..... ....+.. ++..+++++.++.|..
T Consensus 218 ~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~~~~~--~~~~l~~~~~~g~l~~ 291 (376)
T 3q7m_A 218 QATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSGQIMWKRELG--SVNDFIV--DGNRIYLVDQNDRVMA 291 (376)
T ss_dssp C-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTCCEEEEECCC--CEEEEEE--ETTEEEEEETTCCEEE
T ss_pred cCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCCcEEeeccCC--CCCCceE--ECCEEEEEcCCCeEEE
Confidence 110 1 01111 3567888888999999999876654333222 3444443 4668888899999999
Q ss_pred EECCCCceeeeec---CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEE
Q 009569 428 LDREANFERWIEE---EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIAS 504 (532)
Q Consensus 428 wd~~~~~~~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~s 504 (532)
+|..+++...... ...+..... .+..|++++.+|.|+++|..++ +.+..+......+. ... ...+..|+.
T Consensus 292 ~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG-~~~~~~~~~~~~~~---~~~-~~~~~~l~v 364 (376)
T 3q7m_A 292 LTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDG-RFVAQQKVDSSGFQ---TEP-VAADGKLLI 364 (376)
T ss_dssp EETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTC-CEEEEEECCTTCBC---SCC-EEETTEEEE
T ss_pred EECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCC-cEEEEEecCCCcce---eCC-EEECCEEEE
Confidence 9999888433322 122333333 2568888999999999999988 77766665333211 111 112457788
Q ss_pred EeCCCcEEEEeC
Q 009569 505 GSEDSQVNIFLS 516 (532)
Q Consensus 505 gs~dg~i~iw~~ 516 (532)
++.+|.|+.|+.
T Consensus 365 ~~~~G~l~~~~~ 376 (376)
T 3q7m_A 365 QAKDGTVYSITR 376 (376)
T ss_dssp EBTTSCEEEEEC
T ss_pred EeCCCEEEEEeC
Confidence 899999999973
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.88 E-value=2.3e-07 Score=94.92 Aligned_cols=186 Identities=14% Similarity=0.083 Sum_probs=133.5
Q ss_pred CCCEEEEeeC-CCcEEEEECCCCcEEEEeecc-CCceEEEEE-e-eCCCeEEEEe------------------CCCcEEE
Q 009569 328 NDHQLLTCGQ-EEAIRRWDVNSGECLHVYEKT-GVGLISCGW-F-LDGGGIFAGM------------------TDKSICL 385 (532)
Q Consensus 328 ~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~-~~~i~~~~~-~-~~~~~l~~~~------------------~dg~i~i 385 (532)
||++++.+.. +..|.+.|+.+.++...+.-. ...+..+++ . |+++++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 7888877766 457999999999988866533 345778887 4 8999999884 2457999
Q ss_pred EECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCC--------------------------------------eEEE
Q 009569 386 WDLDGRELESWKGQKTLRISDMAITDDGKRIISICREA--------------------------------------AILL 427 (532)
Q Consensus 386 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------------------------------------~I~i 427 (532)
+|.++.++........ ....++++|+|+++++++.+. .|.+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999876655443322 456788999999999988553 4777
Q ss_pred EECCC--Cc--eeeeecCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCC-----------cceeEEeccccceEEEE
Q 009569 428 LDREA--NF--ERWIEEEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDP-----------KLVSRYKGHKRARFVIR 491 (532)
Q Consensus 428 wd~~~--~~--~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~-----------~~~~~~~~~~~~~~~i~ 491 (532)
.|.++ +. ...+.......++.++|||+++++++ .++.|.++|+.+.. ..+........+ ..
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP---~h 335 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP---LH 335 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE---EE
T ss_pred EeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc---ce
Confidence 88776 32 23444455678899999999988876 47789999998641 122333333333 55
Q ss_pred EccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 492 SCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 492 ~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
..| +++|...++.-.|+.|.+||+..
T Consensus 336 ~aF-~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 336 TAF-DGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEE-CTTSEEEEEETTTTEEEEEEHHH
T ss_pred EEE-CCCCeEEEEEecCCcEEEEEhhH
Confidence 677 99994444556699999999876
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.87 E-value=5.1e-07 Score=89.28 Aligned_cols=183 Identities=13% Similarity=0.113 Sum_probs=125.9
Q ss_pred cEEEEEEccCCCEEEEEeCC------CeEEEEEeecCCeeEEEEEeec--CC-CCeEEEEeCCCCCEEEEee--------
Q 009569 274 EVWFLQFSHDGKYLASSSKD------QSAIIWEVKEDGQVSLKHRLSG--HR-KPVFTVSWSPNDHQLLTCG-------- 336 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~d------g~i~iwd~~~~~~~~~~~~~~~--h~-~~v~~l~~s~~~~~l~s~~-------- 336 (532)
.-..+..+|+| +++++..+ |.|.++|..+. +.+..+.. .. .--..+.|+|+++.+++..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~---~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF---EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC---CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHT
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC---eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccc
Confidence 45567888999 66666555 78999998866 34455542 22 2234688899999988875
Q ss_pred -----------CCCcEEEEECCCCcEEEEeecc--CCceEEEEE--eeCCCeEEEEe------CCCcEEEEECCCCeEEE
Q 009569 337 -----------QEEAIRRWDVNSGECLHVYEKT--GVGLISCGW--FLDGGGIFAGM------TDKSICLWDLDGRELES 395 (532)
Q Consensus 337 -----------~dg~i~iwd~~~~~~~~~~~~~--~~~i~~~~~--~~~~~~l~~~~------~dg~i~iwd~~~~~~~~ 395 (532)
.+.+|.+||+.+++.+.++... ......+.| +|+++++++++ .+++|.+|..+.+....
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~ 294 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA 294 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE
Confidence 3689999999999888877653 134455656 99999988877 45688776654432211
Q ss_pred ee-----cC---------------ccCceEEEEEeeCCCEEEEEE-CCCeEEEEECCCCc----eeeeecC---------
Q 009569 396 WK-----GQ---------------KTLRISDMAITDDGKRIISIC-REAAILLLDREANF----ERWIEEE--------- 441 (532)
Q Consensus 396 ~~-----~~---------------~~~~v~~~~~s~~~~~l~~~~-~dg~I~iwd~~~~~----~~~~~~~--------- 441 (532)
.. .. .......|.+++||++|+++. ..+.|.+||+.... ...+...
T Consensus 295 ~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~ 374 (462)
T 2ece_A 295 EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHP 374 (462)
T ss_dssp EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCT
T ss_pred EEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccc
Confidence 11 10 013578899999999998877 46899999986332 1112111
Q ss_pred ------CceeEEEEcCCCCEEEEEe
Q 009569 442 ------EVITSFSLSKDNKYLLVNL 460 (532)
Q Consensus 442 ------~~i~~~~~sp~~~~l~~~~ 460 (532)
.....++++|||++|+++.
T Consensus 375 ~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 375 AGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1357899999999999987
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.84 E-value=2.2e-07 Score=89.94 Aligned_cols=218 Identities=11% Similarity=0.093 Sum_probs=139.2
Q ss_pred CCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceE
Q 009569 284 GKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLI 363 (532)
Q Consensus 284 g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~ 363 (532)
+..|..++.++.+..+|.. +. .......+...+.++...+++. ++.++.++.|..+|.. ++....+......+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~---~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~ 180 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GT---EKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITS 180 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SC---EEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCS
T ss_pred CCEEEEEecCCEEEEEcCC-CC---EEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCcee
Confidence 4457778888999999987 43 2233334445556667776666 5567778999999998 887777765555666
Q ss_pred EEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCce-eeeecCC
Q 009569 364 SCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANFE-RWIEEEE 442 (532)
Q Consensus 364 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~~-~~~~~~~ 442 (532)
++...+++.. ++++ +.+..+|..+........ ....+.++...++|. +.+++.++.|..+|...... .......
T Consensus 181 ~~~~d~~g~l-~v~t--~~l~~~d~~g~~~~~~~~-~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g~~~~~~~~~~~ 255 (330)
T 3hxj_A 181 AASIGKDGTI-YFGS--DKVYAINPDGTEKWNFYA-GYWTVTRPAISEDGT-IYVTSLDGHLYAINPDGTEKWRFKTGKR 255 (330)
T ss_dssp CCEECTTCCE-EEES--SSEEEECTTSCEEEEECC-SSCCCSCCEECTTSC-EEEEETTTEEEEECTTSCEEEEEECSSC
T ss_pred eeEEcCCCEE-EEEe--CEEEEECCCCcEEEEEcc-CCcceeceEECCCCe-EEEEcCCCeEEEECCCCCEeEEeeCCCC
Confidence 7777667664 4455 889999944444433332 333688888888875 55567788898888544442 2222333
Q ss_pred ceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 443 VITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 443 ~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
.+.++.+.+++ .|++++.+|.|..+|. ++ +.+..+......+ ...+..+++. |..++.+|.+++......
T Consensus 256 ~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g-~~~~~~~~~~~~~---~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 256 IESSPVIGNTD-TIYFGSYDGHLYAINP-DG-TEKWNFETGSWII---ATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp CCSCCEECTTS-CEEEECTTCEEEEECT-TS-CEEEEEECSSCCC---SCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred ccccceEcCCC-eEEEecCCCCEEEECC-CC-cEEEEEEcCCccc---cceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 34456666555 5667777889999995 54 5555555433321 1222245665 556889999999877653
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.83 E-value=3.5e-07 Score=98.11 Aligned_cols=161 Identities=13% Similarity=0.131 Sum_probs=113.6
Q ss_pred EEEeCCCCCEEEEeeCCCc-------------------EEEEECCCCcEEEEeeccC---------CceEEEEEeeCCC-
Q 009569 322 TVSWSPNDHQLLTCGQEEA-------------------IRRWDVNSGECLHVYEKTG---------VGLISCGWFLDGG- 372 (532)
Q Consensus 322 ~l~~s~~~~~l~s~~~dg~-------------------i~iwd~~~~~~~~~~~~~~---------~~i~~~~~~~~~~- 372 (532)
.++++|++..++.+..++. |..||.++|+.+..++... ..+.......+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5678888888888887763 9999999999998876421 1222223333565
Q ss_pred --eEEEEeCCCcEEEEECCCCeEEEeecC-c-------------------------c-------------CceEEEEEee
Q 009569 373 --GIFAGMTDKSICLWDLDGRELESWKGQ-K-------------------------T-------------LRISDMAITD 411 (532)
Q Consensus 373 --~l~~~~~dg~i~iwd~~~~~~~~~~~~-~-------------------------~-------------~~v~~~~~s~ 411 (532)
.++.++.+|.++++|.+++++..-... . . ..-..++++|
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp 398 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP 398 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence 788899999999999988766421100 0 0 0112378899
Q ss_pred CCCEEEEEEC---------------------------------------------CCeEEEEECCCCcee-eeecCCcee
Q 009569 412 DGKRIISICR---------------------------------------------EAAILLLDREANFER-WIEEEEVIT 445 (532)
Q Consensus 412 ~~~~l~~~~~---------------------------------------------dg~I~iwd~~~~~~~-~~~~~~~i~ 445 (532)
+..++++... +|.|+.||+.+++.. ...+..++.
T Consensus 399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~ 478 (689)
T 1yiq_A 399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFN 478 (689)
T ss_dssp TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCcc
Confidence 8888777532 377999999999832 233344444
Q ss_pred EEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEecc
Q 009569 446 SFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGH 483 (532)
Q Consensus 446 ~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 483 (532)
.-.++..+.++++++.||.|+.||.+++ +.+.++...
T Consensus 479 ~g~~~tagglvf~gt~dg~l~a~D~~tG-~~lw~~~~~ 515 (689)
T 1yiq_A 479 GGTLSTAGNLVFEGSADGRVIAYAADTG-EKLWEQPAA 515 (689)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTC-CEEEEEECS
T ss_pred CccceECCCEEEEECCCCcEEEEECCCC-ccceeeeCC
Confidence 4566667889999999999999999998 888887754
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.82 E-value=2.4e-06 Score=79.31 Aligned_cols=203 Identities=8% Similarity=0.006 Sum_probs=133.2
Q ss_pred EEEEeecCCC--CeEEEEeCCCCCEEEEeeC--CCcEEEEECCCCcEEEEeeccCC-ceEEEEEeeCCCeEEEEe-CCCc
Q 009569 309 LKHRLSGHRK--PVFTVSWSPNDHQLLTCGQ--EEAIRRWDVNSGECLHVYEKTGV-GLISCGWFLDGGGIFAGM-TDKS 382 (532)
Q Consensus 309 ~~~~~~~h~~--~v~~l~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~-~dg~ 382 (532)
.+.++. |.. ....+.|++++.+.++.+. ++.|.++|+.+++.+..+..... ....+++. ++.++.+. .++.
T Consensus 11 vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 11 VLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSE
T ss_pred EEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCE
Confidence 445553 443 3579999998755555443 57999999999999888763322 22344444 55555544 6789
Q ss_pred EEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeeee--c-C---CceeEEEEcCCCCE
Q 009569 383 ICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWIE--E-E---EVITSFSLSKDNKY 455 (532)
Q Consensus 383 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~--~-~---~~i~~~~~sp~~~~ 455 (532)
+.++|..+.++......... ....+++||+.++++..++.|.++|..+.+ ...+. . . ..++.+.|. +++.
T Consensus 88 v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp EEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 99999988665544432211 124467788888777788999999999877 22221 1 1 136678888 6755
Q ss_pred EEEEecCCeEEEEecCCCCcceeEEeccc-----------cceEEEEEccCCCCCc-EEEEEeCCCcEEEEeCCCC
Q 009569 456 LLVNLINQEIHLWSIESDPKLVSRYKGHK-----------RARFVIRSCFGGFEQA-FIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 456 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----------~~~~~i~~~~~s~d~~-~l~sgs~dg~i~iw~~~~~ 519 (532)
.+....++.|.+.|..++ +.+.++.... .......++| +|+++ +++++...++|+..++...
T Consensus 165 yvn~~~~~~V~vID~~tg-~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~-~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 165 WANIWQTDCIARISAKDG-TLLGWILLPNLRKKLIDEGFRDIDVLNGIAW-DQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEETTSSEEEEEETTTC-CEEEEEECHHHHHHHHHTTCTTCCCEEEEEE-ETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEecCCCCeEEEEECCCC-cEEEEEECCCcccccccccccccCceEEEEE-cCCCCEEEEECCCCCeEEEEEEecc
Confidence 555546789999999998 7888876421 0011233555 77765 5666777899999888654
No 244
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=98.73 E-value=2.9e-08 Score=73.22 Aligned_cols=37 Identities=24% Similarity=0.239 Sum_probs=34.6
Q ss_pred cchHHHHHHHHHHHHhcChHHHHHHHhhhcCcccCCH
Q 009569 61 IKKSEFIKIITRALYSLGYDKSGALLEEESGIPMHSS 97 (532)
Q Consensus 61 i~~~e~~~lI~q~L~e~G~~~sa~~L~~Es~i~~~~~ 97 (532)
++++||++||++||+|.||.+||++|++||+|...+.
T Consensus 3 itsdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~~~~ 39 (90)
T 2xtc_A 3 ITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNI 39 (90)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGGSCC
T ss_pred CcHHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCcccc
Confidence 7899999999999999999999999999999987653
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.73 E-value=2.3e-07 Score=89.76 Aligned_cols=253 Identities=13% Similarity=0.119 Sum_probs=149.0
Q ss_pred ccccccCCCCCceeeccCCccCCCCCcceeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeec
Q 009569 236 SCLFHNTSDSDFSLYSDHQCGRNRIPSQTLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSG 315 (532)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~ 315 (532)
..++.++.++.+..++ .+ .+.......+...+.++...++|.+ ..++.+ +..+|. ++... ..+..
T Consensus 31 g~l~v~t~~~~l~~~d-~~-------g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~--l~~~d~-~g~~~---~~~~~ 95 (330)
T 3hxj_A 31 GTIYLGSSNKNLYAIN-TD-------GSVKWFFKSGEIIECRPSIGKDGTI-YFGSDK--VYAINP-DGTEK---WRFDT 95 (330)
T ss_dssp SCEECSSTTTTTEEEC-TT-------SCEEESSCGGGEEEECCEETTTTEE-CCSSCE--EEEECC-CGGGG---GGSCC
T ss_pred CeEEEEcCCCEEEEEC-CC-------CcEEEEEecCCCcccceEEecCCcE-EEecCc--EEEECC-CCcEE---EEEEC
Confidence 3445555555566555 22 2223333334455677777777764 444444 777875 33221 11111
Q ss_pred CCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEE
Q 009569 316 HRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELES 395 (532)
Q Consensus 316 h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 395 (532)
.........+. +..+..++.++.|..+|.. ++....+......+.++...+++. +++++.++.|..+|..+.....
T Consensus 96 ~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~g~~~~~ 171 (330)
T 3hxj_A 96 KKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPDGTEKWR 171 (330)
T ss_dssp -----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTTSCEEEE
T ss_pred CCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCCCCEeEE
Confidence 11112222222 4567778888999999998 877766665555556666665665 6677888999999998444333
Q ss_pred eecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 396 WKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 396 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
... ....+.++.+.+++..++. + +.|..|| .++. .........+.++..++++. |.+++.++.|..+|. ++
T Consensus 172 ~~~-~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g 244 (330)
T 3hxj_A 172 FKT-NDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DG 244 (330)
T ss_dssp EEC-SSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TS
T ss_pred Eec-CCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CC
Confidence 332 2336777788778775544 4 8899999 5544 22223345688888888875 555666788888884 34
Q ss_pred CcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 474 PKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 474 ~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
..+..+......... ... .+++ .|+.++.+|.|+.+|. ++.
T Consensus 245 -~~~~~~~~~~~~~~~--~~~-~~~g-~l~v~t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 245 -TEKWRFKTGKRIESS--PVI-GNTD-TIYFGSYDGHLYAINP-DGT 285 (330)
T ss_dssp -CEEEEEECSSCCCSC--CEE-CTTS-CEEEECTTCEEEEECT-TSC
T ss_pred -CEeEEeeCCCCcccc--ceE-cCCC-eEEEecCCCCEEEECC-CCc
Confidence 455555443322111 122 3344 5667888889999996 443
No 246
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.72 E-value=2.4e-06 Score=78.46 Aligned_cols=187 Identities=12% Similarity=0.146 Sum_probs=122.8
Q ss_pred ceeEEccccccc--EEEEEEccCCCEEEEEeCCC--eEEEEEeecCCeeEEEEEeecCCCCeE--EEEeCCCCCEEEEe-
Q 009569 263 QTLQILEAHSDE--VWFLQFSHDGKYLASSSKDQ--SAIIWEVKEDGQVSLKHRLSGHRKPVF--TVSWSPNDHQLLTC- 335 (532)
Q Consensus 263 ~~~~~l~~h~~~--V~~v~~s~~g~~las~s~dg--~i~iwd~~~~~~~~~~~~~~~h~~~v~--~l~~s~~~~~l~s~- 335 (532)
+.++++ .|... ...+.|+ ++.+..+.+.+| .|+++|+.++... ..+... .... .++. ++..|...
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~---~~~~l~-~~~FgeGit~--~g~~ly~lt 103 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTL---QQIELG-KRYFGEGISD--WKDKIVGLT 103 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEE---EEEECC-TTCCEEEEEE--ETTEEEEEE
T ss_pred EEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEE---EEEecC-CccceeEEEE--eCCEEEEEE
Confidence 445555 35433 4788898 676666777666 8999999987433 333322 2222 3444 34455444
Q ss_pred eCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecC-----ccCceEEEEEe
Q 009569 336 GQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQ-----KTLRISDMAIT 410 (532)
Q Consensus 336 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~s 410 (532)
-.++.+.+||..+.+.+.++...... +. +.++++.++.+..++.|.++|..+.++...... .-..++.+.|.
T Consensus 104 w~~~~v~v~D~~t~~~~~ti~~~~eG-~g--lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 104 WKNGLGFVWNIRNLRQVRSFNYDGEG-WG--LTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSSCC-CC--EEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred eeCCEEEEEECccCcEEEEEECCCCc-eE--EecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE
Confidence 45889999999999999988754322 23 345788888877778899999987554333222 11245667876
Q ss_pred eCCCEEEEEECCCeEEEEECCCCc-eeeeec-------------CCceeEEEEcCCCCEEEEEec
Q 009569 411 DDGKRIISICREAAILLLDREANF-ERWIEE-------------EEVITSFSLSKDNKYLLVNLI 461 (532)
Q Consensus 411 ~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~-------------~~~i~~~~~sp~~~~l~~~~~ 461 (532)
+|...+..-.++.|.+.|.++++ ...+.. ....+.|+|+|+++.|++.+.
T Consensus 181 -~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 181 -DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp -TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred -CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 67655555578899999999988 222221 235689999999888877764
No 247
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.69 E-value=6.8e-06 Score=89.13 Aligned_cols=247 Identities=12% Similarity=0.120 Sum_probs=140.7
Q ss_pred cccc-cEEEEEEc-cCCCEEEEEeC-C----CeEEEEEeecC-CeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC---
Q 009569 270 AHSD-EVWFLQFS-HDGKYLASSSK-D----QSAIIWEVKED-GQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE--- 338 (532)
Q Consensus 270 ~h~~-~V~~v~~s-~~g~~las~s~-d----g~i~iwd~~~~-~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d--- 338 (532)
+|.- .+...+|| |||++||.+.. + .+|+++|+.++ ..+. ..+.. ....+.|+|||+.|+....+
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~--~~~~~---~~~~~~WspDg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA--DKVSG---TNGEIVWGPDHTSLFYVTKDETL 244 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC--CCEEE---ECSCCEECSSTTEEEEEEECTTC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC--ccccC---ceeeEEEecCCCEEEEEEECCCC
Confidence 3443 67889999 99999885432 2 35999999876 4211 01111 12467899999888877765
Q ss_pred --CcEEEEECCCCcE--EEEeec-cCCceEEEEEeeCCCeEEEEeC---CCcEEEEECCCC--eE--EEeecCccCceEE
Q 009569 339 --EAIRRWDVNSGEC--LHVYEK-TGVGLISCGWFLDGGGIFAGMT---DKSICLWDLDGR--EL--ESWKGQKTLRISD 406 (532)
Q Consensus 339 --g~i~iwd~~~~~~--~~~~~~-~~~~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~--~~--~~~~~~~~~~v~~ 406 (532)
..|.++++.++.. ...+.. .......+.|+|||++|+..+. ...|+++|+.+. .. ..+.........+
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s 324 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD 324 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence 2688889877642 233332 2334567899999999887653 346888998764 33 4444333334455
Q ss_pred EEEeeCCCEEEEEECC-----CeEEEEECCC-Cc-ee-eeecCC--ceeEEEEcCCCCEEEEEecCCe--EEEEec----
Q 009569 407 MAITDDGKRIISICRE-----AAILLLDREA-NF-ER-WIEEEE--VITSFSLSKDNKYLLVNLINQE--IHLWSI---- 470 (532)
Q Consensus 407 ~~~s~~~~~l~~~~~d-----g~I~iwd~~~-~~-~~-~~~~~~--~i~~~~~sp~~~~l~~~~~dg~--i~iwd~---- 470 (532)
+.|+. |..|+..+.. ..|..+|+.+ .. .. ++.+.. .+..+.+. .+.++++...++. |+++|+
T Consensus 325 ~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~ 402 (751)
T 2xe4_A 325 VQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQD 402 (751)
T ss_dssp EEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTT
T ss_pred Eeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEeccccc
Confidence 55443 5655554433 3688888875 23 44 455544 34555554 2344555666775 555665
Q ss_pred ---CCCCcceeEEeccccceEEEEEccC---CCCC-cEEEEEeCC---CcEEEEeCCCCCceeee
Q 009569 471 ---ESDPKLVSRYKGHKRARFVIRSCFG---GFEQ-AFIASGSED---SQVNIFLSFSPFAKKIK 525 (532)
Q Consensus 471 ---~~~~~~~~~~~~~~~~~~~i~~~~~---s~d~-~~l~sgs~d---g~i~iw~~~~~~~~~~~ 525 (532)
.++ .....+..... .+...+.+. ++++ .++++.+.. +.++.+|+.++....+.
T Consensus 403 ~~~~~g-~~~~~l~l~~~-~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 403 GVFKAG-TGLREVVMEEP-IFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp SCCCTT-TCCEECCCCCS-SCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEE
T ss_pred ccccCC-ccceEECCCCc-eeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEe
Confidence 232 21333321111 112233210 2344 355554443 46888888877654443
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.67 E-value=8.9e-06 Score=78.53 Aligned_cols=195 Identities=11% Similarity=0.100 Sum_probs=125.1
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeec--------------------cCCceEEEEEeeCCCeEEEEe
Q 009569 319 PVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEK--------------------TGVGLISCGWFLDGGGIFAGM 378 (532)
Q Consensus 319 ~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------------------~~~~i~~~~~~~~~~~l~~~~ 378 (532)
...+++|.+++++++++..++.|..||..++... .+.. ....+..+++.+++..|+++.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 3567889999987888888999999998766543 2221 012478899997334556665
Q ss_pred CCCcEEEEECCCCeEEEeecC----ccCceEEEEEee-CCCEEEEEEC-----------------CCeEEEEECCCCc-e
Q 009569 379 TDKSICLWDLDGRELESWKGQ----KTLRISDMAITD-DGKRIISICR-----------------EAAILLLDREANF-E 435 (532)
Q Consensus 379 ~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~s~-~~~~l~~~~~-----------------dg~I~iwd~~~~~-~ 435 (532)
..+.|..+|..++.+..+... .......+++.+ +|+..++-.. ++.|..||..++. .
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 556688999886654333221 112578899999 9987666432 3679999987766 3
Q ss_pred eeeecCCceeEEEEcCCCCEEEEE-ecCCeEEEEecCCCC-cceeEEeccccceEEEEEccCCCCCcEEEEEeC------
Q 009569 436 RWIEEEEVITSFSLSKDNKYLLVN-LINQEIHLWSIESDP-KLVSRYKGHKRARFVIRSCFGGFEQAFIASGSE------ 507 (532)
Q Consensus 436 ~~~~~~~~i~~~~~sp~~~~l~~~-~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~------ 507 (532)
...........++++|++++|+++ ...+.|.+|++.... .....+..... .-.+++ .++|++.++...
T Consensus 179 ~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~-d~~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 179 LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKR-NADGHFWVSSSEELDGNM 254 (322)
T ss_dssp EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS---EEEEEE-CTTSCEEEEEEEETTSST
T ss_pred EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC---CCCeEE-CCCCCEEEEecCcccccc
Confidence 333333456789999999977666 456899999987531 01112211111 122344 788887666544
Q ss_pred ----CCcEEEEeCCC
Q 009569 508 ----DSQVNIFLSFS 518 (532)
Q Consensus 508 ----dg~i~iw~~~~ 518 (532)
.+.|..++...
T Consensus 255 ~~~~~~~v~~~d~~G 269 (322)
T 2fp8_A 255 HGRVDPKGIKFDEFG 269 (322)
T ss_dssp TSCEEEEEEEECTTS
T ss_pred cCCCccEEEEECCCC
Confidence 46788888753
No 249
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.65 E-value=6.4e-05 Score=73.39 Aligned_cols=240 Identities=9% Similarity=-0.020 Sum_probs=146.4
Q ss_pred ccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee-CCCcEEEEECCCCcE
Q 009569 273 DEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG-QEEAIRRWDVNSGEC 351 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~ 351 (532)
+..+|.+..+++ +|+.+. ...|+..++... .. ...+. ....+..++|++.+..|+.+. ..+.|..++...+..
T Consensus 34 d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~-~~--~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~ 107 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRS-EY--TLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 107 (349)
T ss_dssp TSSCEEESSSCC-EEEEEC-BSCEEEECTTSC-CE--EEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCcccccccCc-eeEeec-ccceEEEeCCCC-ee--EEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc
Confidence 334566655644 444433 345777776533 22 22222 334578999998666665554 567899999887654
Q ss_pred EEEeeccCCceEEEEEeeCCCeE-EEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CC-CeEEEE
Q 009569 352 LHVYEKTGVGLISCGWFLDGGGI-FAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-RE-AAILLL 428 (532)
Q Consensus 352 ~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d-g~I~iw 428 (532)
...+.........+++.+.+..| ++-...+.|.+.++++................++++|.+..|+.+. .. +.|..+
T Consensus 108 ~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 108 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEE
Confidence 44443333456788898755544 5555678899999987654444433334689999999766665554 44 789999
Q ss_pred ECCCCce-eee-ecCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEE
Q 009569 429 DREANFE-RWI-EEEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASG 505 (532)
Q Consensus 429 d~~~~~~-~~~-~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sg 505 (532)
++..... .+. ..-.....++++|++..|+.+. ..+.|..+|+... .....+.........+.+ + ++.+.++-
T Consensus 188 ~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~-~~~~~~~~~~~~P~giav-~---~~~ly~td 262 (349)
T 3v64_C 188 SMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQGLPHPFAITV-F---EDSLYWTD 262 (349)
T ss_dssp ETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSSEEEEEE-E---TTEEEEEE
T ss_pred eCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC-ceEEEEeCCCCCceEEEE-E---CCEEEEec
Confidence 9876552 222 2334578999998777666664 4568999998754 222222222222223333 2 35556666
Q ss_pred eCCCcEEEEeCCCCCcee
Q 009569 506 SEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 506 s~dg~i~iw~~~~~~~~~ 523 (532)
...+.|..++..++....
T Consensus 263 ~~~~~V~~~~~~~G~~~~ 280 (349)
T 3v64_C 263 WHTKSINSANKFTGKNQE 280 (349)
T ss_dssp TTTTEEEEEETTTCCSCE
T ss_pred CCCCeEEEEEccCCCccE
Confidence 667888888866655433
No 250
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.63 E-value=8.9e-05 Score=71.29 Aligned_cols=225 Identities=7% Similarity=-0.071 Sum_probs=138.7
Q ss_pred EEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee-CCCcEEEEECCC----CcEEEEeeccCCc
Q 009569 287 LASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG-QEEAIRRWDVNS----GECLHVYEKTGVG 361 (532)
Q Consensus 287 las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~----~~~~~~~~~~~~~ 361 (532)
|+.+.. ..|+..++.+.... ..+. ....+..++|++.+..|+.+. .++.|..++... ......+...-..
T Consensus 4 ll~~~~-~~I~~i~~~~~~~~---~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 78 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRSEYT---SLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 78 (316)
T ss_dssp EEEECB-SSEEEEETTSCCCE---EEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred EEEECC-CeEEEEECCCcceE---ehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence 444433 46888888754322 2222 345678999998766555554 468999999876 2222223222245
Q ss_pred eEEEEEeeCCCeE-EEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECC--CeEEEEECCCCcee-e
Q 009569 362 LISCGWFLDGGGI-FAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICRE--AAILLLDREANFER-W 437 (532)
Q Consensus 362 i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~I~iwd~~~~~~~-~ 437 (532)
...+++.+.+..| ++-...+.|.++|+++.....+..........++++|.+..|+.+... +.|..+++...... +
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~ 158 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 158 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEE
Confidence 6788898755555 454567899999998765554443333468999999977766665543 68999998765532 2
Q ss_pred e-ecCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEe-cc--ccceEEEEEccCCCCCcEEEEEeCCCcEE
Q 009569 438 I-EEEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYK-GH--KRARFVIRSCFGGFEQAFIASGSEDSQVN 512 (532)
Q Consensus 438 ~-~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-~~--~~~~~~i~~~~~s~d~~~l~sgs~dg~i~ 512 (532)
. ..-.....++++|++..|+.+. ..+.|..+|+... ....+. .. ......+ +. . .+.++++-...+.|.
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~--~~~~~~~~~~~~~~P~gi--av-~-~~~ly~~d~~~~~V~ 232 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDEKRLAHPFSL--AV-F-EDKVFWTDIINEAIF 232 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEECTTTTSSEEEE--EE-E-TTEEEEEETTTTEEE
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC--ceEEEeecCCccCCcEEE--EE-E-CCEEEEEECCCCeEE
Confidence 2 2335678999999877776665 4568999998753 223332 11 1122223 33 2 355666666778899
Q ss_pred EEeCCCCCce
Q 009569 513 IFLSFSPFAK 522 (532)
Q Consensus 513 iw~~~~~~~~ 522 (532)
.++..++...
T Consensus 233 ~~~~~~g~~~ 242 (316)
T 1ijq_A 233 SANRLTGSDV 242 (316)
T ss_dssp EEETTTCCCC
T ss_pred EEeCCCCcce
Confidence 9998776543
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.61 E-value=4.5e-06 Score=89.17 Aligned_cols=231 Identities=12% Similarity=0.118 Sum_probs=143.8
Q ss_pred CCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCC-CCeEEEEeCC--CCCEEEEeeC------CCcEEEEECCCCcEEEE
Q 009569 284 GKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHR-KPVFTVSWSP--NDHQLLTCGQ------EEAIRRWDVNSGECLHV 354 (532)
Q Consensus 284 g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~l~~s~--~~~~l~s~~~------dg~i~iwd~~~~~~~~~ 354 (532)
+..++.++.|+.|..+|..++... ..+.... .....+..+| .+..++++.. +|.|..+|..+|+.+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~---W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAI---WSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEE---EEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEe---eeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 457788888999999999887433 3332211 0001111122 1334555543 58999999999999887
Q ss_pred eeccC-------------------------------CceEEEEEeeCCCeEEEEeCCC-------------------cEE
Q 009569 355 YEKTG-------------------------------VGLISCGWFLDGGGIFAGMTDK-------------------SIC 384 (532)
Q Consensus 355 ~~~~~-------------------------------~~i~~~~~~~~~~~l~~~~~dg-------------------~i~ 384 (532)
+.... .....+++.|+...+++++.++ .|.
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 75311 0112467888888888887766 399
Q ss_pred EEECCCCeEEEeecC--cc-------CceEEEEEeeCCC---EEEEEECCCeEEEEECCCCceeeeec------------
Q 009569 385 LWDLDGRELESWKGQ--KT-------LRISDMAITDDGK---RIISICREAAILLLDREANFERWIEE------------ 440 (532)
Q Consensus 385 iwd~~~~~~~~~~~~--~~-------~~v~~~~~s~~~~---~l~~~~~dg~I~iwd~~~~~~~~~~~------------ 440 (532)
.+|.++++..-.... +. .+.....+..+|+ .++.++.+|.++++|..+++......
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~ 353 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL 353 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccc
Confidence 999987765433221 11 1222233344665 68888999999999999887221000
Q ss_pred --CCc------------------------eeEEEEcCCCCEEEEEe----------------------------------
Q 009569 441 --EEV------------------------ITSFSLSKDNKYLLVNL---------------------------------- 460 (532)
Q Consensus 441 --~~~------------------------i~~~~~sp~~~~l~~~~---------------------------------- 460 (532)
..+ -..++++|+...+++..
T Consensus 354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~ 433 (668)
T 1kv9_A 354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA 433 (668)
T ss_dssp TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred ccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCC
Confidence 000 11267888877766532
Q ss_pred --cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 461 --INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 461 --~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
.+|.|..||+.++ +.+-++..+.... . ... ...+.+++.++.||.|+.||..+++..
T Consensus 434 ~~~~g~l~A~D~~tG-~~~W~~~~~~~~~-~--~~~-~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 434 AVVSGALLAWDPVKQ-KAAWKVPYPTHWN-G--GTL-STAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp GGCEEEEEEEETTTT-EEEEEEEESSSCC-C--CEE-EETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCccceEEEEeCCCC-cEEEEccCCCCCc-C--cee-EeCCCEEEEECCcccchhhhhhcChhh
Confidence 2378999999998 6666655432211 0 111 335678888999999999999998653
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.59 E-value=1.5e-05 Score=73.19 Aligned_cols=188 Identities=12% Similarity=0.109 Sum_probs=123.5
Q ss_pred ceeEEcccccc--cEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCc
Q 009569 263 QTLQILEAHSD--EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEA 340 (532)
Q Consensus 263 ~~~~~l~~h~~--~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~ 340 (532)
+.+.++ .|.. -...+.|+ ++.+..+.+.+|.|+++|+.+++..... +... .--..+++.. ++..+....++.
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~-~FgeGit~~g-~~Ly~ltw~~~~ 117 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLGN-IFAEGLASDG-ERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTT-CCEEEEEECS-SCEEEEESSSCE
T ss_pred EEEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCC-cceeEEEEeC-CEEEEEEccCCE
Confidence 344445 3443 34678887 4666677788899999999987654443 3322 1123355543 234444456889
Q ss_pred EEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCc-----cCceEEEEEeeCCCE
Q 009569 341 IRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQK-----TLRISDMAITDDGKR 415 (532)
Q Consensus 341 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~ 415 (532)
+.+||..+.+.+.++..... -+.++ ++++.|+.+..++.|.++|..+.++....... -..++.+.|. +|..
T Consensus 118 v~V~D~~Tl~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI 193 (268)
T ss_dssp EEEEETTTTEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCcCcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE
Confidence 99999999999998875433 23444 57888888877899999999875554333221 1245777877 7765
Q ss_pred EEEEECCCeEEEEECCCCc-eeeee--------------cCCceeEEEEcCCCCEEEEEe
Q 009569 416 IISICREAAILLLDREANF-ERWIE--------------EEEVITSFSLSKDNKYLLVNL 460 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~~~-~~~~~--------------~~~~i~~~~~sp~~~~l~~~~ 460 (532)
++....++.|.+.|.++++ ...+. .....+.|+++|+++.|++.+
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 5555468899999999987 22221 123578999999876666655
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.59 E-value=1.6e-05 Score=72.96 Aligned_cols=190 Identities=14% Similarity=0.088 Sum_probs=122.3
Q ss_pred EEEEeecCCCC--eEEEEeCCCCCEEEEeeCCC--cEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEe-CCCcE
Q 009569 309 LKHRLSGHRKP--VFTVSWSPNDHQLLTCGQEE--AIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGM-TDKSI 383 (532)
Q Consensus 309 ~~~~~~~h~~~--v~~l~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i 383 (532)
.+.++. |... ...+.|+ ++.++.+++.+| .|+++|+.+++.+..+.... ........++++.++... .++.+
T Consensus 33 vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEE
Confidence 445553 4433 4788998 677777777766 89999999999988876443 333333344455666554 58899
Q ss_pred EEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeee---ecC---CceeEEEEcCCCCEE
Q 009569 384 CLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWI---EEE---EVITSFSLSKDNKYL 456 (532)
Q Consensus 384 ~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~---~~~---~~i~~~~~sp~~~~l 456 (532)
.+||..+.++........ ....+++|++.++.+..++.|.++|..+.+ ...+ ... ..++.+.|. +|+..
T Consensus 110 ~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ly 185 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIF 185 (262)
T ss_dssp EEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEE
Confidence 999998766554443322 223445678877777778899999999877 2211 112 234557776 67655
Q ss_pred EEEecCCeEEEEecCCCCcceeEEeccc----------cceEEEEEccCCCCCcEEEEEeC
Q 009569 457 LVNLINQEIHLWSIESDPKLVSRYKGHK----------RARFVIRSCFGGFEQAFIASGSE 507 (532)
Q Consensus 457 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~----------~~~~~i~~~~~s~d~~~l~sgs~ 507 (532)
+..-.++.|.+.|..++ +.+..+.... .......+++ +|+++.|+..+.
T Consensus 186 an~w~~~~I~vIDp~tG-~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~-dp~~~~lfVTGK 244 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETG-KVTGIIDLNGILAEAGPLPSPIDVLNGIAW-DKEHHRLFVTGK 244 (262)
T ss_dssp EEETTSSEEEEECTTTC-BEEEEEECTTGGGGSCSCCSSCCCEEEEEE-ETTTTEEEEEET
T ss_pred EEEccCCeEEEEECCCC-cEEEEEECCcCccccccccCcCCceEEEEE-cCCCCEEEEECC
Confidence 55556889999999998 7777775421 0111233555 777666655544
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.56 E-value=3.4e-05 Score=70.16 Aligned_cols=189 Identities=12% Similarity=0.101 Sum_probs=120.9
Q ss_pred ceeEEccccc--ccEEEEEEccCCCEEEEEeCC--CeEEEEEeecCCeeEEEEEeecCCCC-eEEEEeCCCCCEEEEeeC
Q 009569 263 QTLQILEAHS--DEVWFLQFSHDGKYLASSSKD--QSAIIWEVKEDGQVSLKHRLSGHRKP-VFTVSWSPNDHQLLTCGQ 337 (532)
Q Consensus 263 ~~~~~l~~h~--~~V~~v~~s~~g~~las~s~d--g~i~iwd~~~~~~~~~~~~~~~h~~~-v~~l~~s~~~~~l~s~~~ 337 (532)
+.+..+ .|. .-...+.|++ +.+..+.+.+ ..|+.+|+.++... ....-.... --.+++. +++.....-.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~---~~~~l~~~~fgeGi~~~-~~~ly~ltw~ 83 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRIL---QRAEVPPPYFGAGIVAW-RDRLIQLTWR 83 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEE---EEEECCTTCCEEEEEEE-TTEEEEEESS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEE---EEEeCCCCcceeEEEEe-CCEEEEEEee
Confidence 444555 454 3466889986 5555565554 48999999987433 333222221 1233443 2334444456
Q ss_pred CCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCc-----cCceEEEEEeeC
Q 009569 338 EEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQK-----TLRISDMAITDD 412 (532)
Q Consensus 338 dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~s~~ 412 (532)
++.+.+||..+.+.+.++.....+ +.++ +++..|+.+..++.|.++|..+.++....... -..++.+.|. +
T Consensus 84 ~~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~ 159 (243)
T 3mbr_X 84 NHEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-N 159 (243)
T ss_dssp SSEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-C
Confidence 889999999999999998754432 3444 57778887777889999999875543332221 1245677765 6
Q ss_pred CCEEEEEECCCeEEEEECCCCc-eeeee--------------cCCceeEEEEcCCCCEEEEEec
Q 009569 413 GKRIISICREAAILLLDREANF-ERWIE--------------EEEVITSFSLSKDNKYLLVNLI 461 (532)
Q Consensus 413 ~~~l~~~~~dg~I~iwd~~~~~-~~~~~--------------~~~~i~~~~~sp~~~~l~~~~~ 461 (532)
|+.++..-.+..|.+.|.++++ ...+. .....+.|+++|+++.|++.+.
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 6655555468899999999988 22221 1235689999998877777663
No 255
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.52 E-value=2.4e-06 Score=91.26 Aligned_cols=244 Identities=13% Similarity=-0.014 Sum_probs=141.1
Q ss_pred EEEEcc-CCCEEEEEeCCC-----------eEEEEEeecCCeeEEEEEee-cCCCCeEEEEeCCCCCEEEEeeC-CCcEE
Q 009569 277 FLQFSH-DGKYLASSSKDQ-----------SAIIWEVKEDGQVSLKHRLS-GHRKPVFTVSWSPNDHQLLTCGQ-EEAIR 342 (532)
Q Consensus 277 ~v~~s~-~g~~las~s~dg-----------~i~iwd~~~~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~~~-dg~i~ 342 (532)
.+++.+ +|+.++.|+.+. .+.+||..++. +..+..+. .+.....++++..+++.++.|+. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-BCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc-EEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 556677 888888887543 57889987653 33333332 23344456778889999999985 45899
Q ss_pred EEECCCCcEEEEeeccCCc-eEEEEEeeCCCeEEEEe-CC-----CcEEEEECCCCeEEEeecCccC----ceEEEEEee
Q 009569 343 RWDVNSGECLHVYEKTGVG-LISCGWFLDGGGIFAGM-TD-----KSICLWDLDGRELESWKGQKTL----RISDMAITD 411 (532)
Q Consensus 343 iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~~~~~~----~v~~~~~s~ 411 (532)
+||..+.+....-..+... -.+++..++++.++.|+ .+ ..+.+||..+............ .-....+..
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 9999887654332222211 23455667899999988 34 5699999988765543110000 000011223
Q ss_pred CCCEEEEEECC---------CeEEEEECCCCc-eeeee-cC---------CceeEEEEc-CCCCEEEEEecCC-------
Q 009569 412 DGKRIISICRE---------AAILLLDREANF-ERWIE-EE---------EVITSFSLS-KDNKYLLVNLINQ------- 463 (532)
Q Consensus 412 ~~~~l~~~~~d---------g~I~iwd~~~~~-~~~~~-~~---------~~i~~~~~s-p~~~~l~~~~~dg------- 463 (532)
++..++.++.+ ..+..||..+.. ..... .. ..-.++.|. .+++++++|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 44555555443 457888887765 11111 11 122344444 3778888887543
Q ss_pred ----eEEEEecCCCCcceeEE--eccccceEEEEEccCCCCCcEEEEEeCC-----------CcEEEEeCCCCCceee
Q 009569 464 ----EIHLWSIESDPKLVSRY--KGHKRARFVIRSCFGGFEQAFIASGSED-----------SQVNIFLSFSPFAKKI 524 (532)
Q Consensus 464 ----~i~iwd~~~~~~~~~~~--~~~~~~~~~i~~~~~s~d~~~l~sgs~d-----------g~i~iw~~~~~~~~~~ 524 (532)
.|.+||..+. .-.... ..+... ....++. .+++++++.|+.+ ..+.+||..+.....+
T Consensus 429 ~~~~~v~~yd~~~~-~W~~~~~~~mp~~R-~~~~~~~-l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~ 503 (656)
T 1k3i_A 429 TNAHIITLGEPGTS-PNTVFASNGLYFAR-TFHTSVV-LPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQ 503 (656)
T ss_dssp CCEEEEECCSTTSC-CEEEECTTCCSSCC-BSCEEEE-CTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEEC
T ss_pred CcceEEEcCCCCCC-CeeEEccCCCCCCc-ccCCeEE-CCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeec
Confidence 6788887765 222111 111111 1111222 5789999999865 5689999987665443
No 256
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.52 E-value=2.5e-05 Score=71.67 Aligned_cols=165 Identities=8% Similarity=0.089 Sum_probs=110.1
Q ss_pred EEEEeecCCC--CeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEE-EeCCCcEEE
Q 009569 309 LKHRLSGHRK--PVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFA-GMTDKSICL 385 (532)
Q Consensus 309 ~~~~~~~h~~--~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i 385 (532)
.+.++. |.. -...+.|+ ++.+.++.+.+|.|+++|+++++.+..+ -. .........++++.++. .-.++.+.+
T Consensus 45 Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~ltw~~~~v~V 120 (268)
T 3nok_A 45 IIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLTWTEGLLFT 120 (268)
T ss_dssp EEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEESSSCEEEE
T ss_pred EEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEEccCCEEEE
Confidence 444453 433 34688887 4667777788899999999999988777 33 23333223334455554 446889999
Q ss_pred EECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeee---ecC---CceeEEEEcCCCCEEEE
Q 009569 386 WDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWI---EEE---EVITSFSLSKDNKYLLV 458 (532)
Q Consensus 386 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~---~~~---~~i~~~~~sp~~~~l~~ 458 (532)
||..+.++........ .- ..+++|++.|+.+..++.|.++|..+.+ ...+ ... ..++.+.|. +|+..+.
T Consensus 121 ~D~~Tl~~~~ti~~~~-eG--wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyan 196 (268)
T 3nok_A 121 WSGMPPQRERTTRYSG-EG--WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYAN 196 (268)
T ss_dssp EETTTTEEEEEEECSS-CC--CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EECCcCcEEEEEeCCC-ce--eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEE
Confidence 9999876655444332 22 3344678888888889999999999877 2211 222 234667777 6765544
Q ss_pred EecCCeEEEEecCCCCcceeEEec
Q 009569 459 NLINQEIHLWSIESDPKLVSRYKG 482 (532)
Q Consensus 459 ~~~dg~i~iwd~~~~~~~~~~~~~ 482 (532)
.-.++.|.+.|..++ +.+..+..
T Consensus 197 vw~s~~I~vIDp~TG-~V~~~Idl 219 (268)
T 3nok_A 197 IWHSSDVLEIDPATG-TVVGVIDA 219 (268)
T ss_dssp ETTCSEEEEECTTTC-BEEEEEEC
T ss_pred ECCCCeEEEEeCCCC-cEEEEEEC
Confidence 446889999999998 77777653
No 257
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.52 E-value=0.00013 Score=79.70 Aligned_cols=239 Identities=7% Similarity=0.029 Sum_probs=155.3
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEee----cCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECC
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS----GHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVN 347 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~----~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 347 (532)
...|.++...++|. |..|+.++-|..|+..+. .+....... -....|.++...++|.+ ..|+.++-|..||..
T Consensus 309 ~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~ 385 (795)
T 4a2l_A 309 QRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRN-RFKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPI 385 (795)
T ss_dssp SSCEEEEEECTTSC-EEEEESSSCEEEECGGGG-SSEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTT
T ss_pred CCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcc-cceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCC
Confidence 36799999999887 455667777888887643 222221111 12456999998887764 456777779999988
Q ss_pred CCcEEEEeec--------cCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeec----CccCceEEEEEeeCCCE
Q 009569 348 SGECLHVYEK--------TGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKG----QKTLRISDMAITDDGKR 415 (532)
Q Consensus 348 ~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~v~~~~~s~~~~~ 415 (532)
++........ ....|.+++..++++.+.+|+.++-|..||..++....+.. .....|.++...++|.+
T Consensus 386 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l 465 (795)
T 4a2l_A 386 TQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNL 465 (795)
T ss_dssp TCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCE
T ss_pred CCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCE
Confidence 7765433211 23568888888888757778887889999998877666543 12347999999888875
Q ss_pred EEEEECCCeEEEEECCCCceeeee--------cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEec---c-
Q 009569 416 IISICREAAILLLDREANFERWIE--------EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKG---H- 483 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~~~~~~~~--------~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~- 483 (532)
.+. +. +.+.+||..++...... ....|.++...++|++.+.. . +.|..||..+. .. .+.. .
T Consensus 466 wig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~-~~--~~~~~~~~~ 538 (795)
T 4a2l_A 466 WLG-TL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGL-DI--QKASILPVS 538 (795)
T ss_dssp EEE-ES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETT-EE--EECCCSCSC
T ss_pred EEE-ec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCC-eE--EEecCCCCC
Confidence 554 44 46889998877622221 13568999999988765544 4 55889998765 33 3321 0
Q ss_pred -ccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCcee
Q 009569 484 -KRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 484 -~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~~ 523 (532)
.....+..+.. .++|.+.+ |+.. -|..|+..++....
T Consensus 539 ~l~~~~i~~i~~-d~~g~lWi-gT~~-Gl~~~d~~~~~~~~ 576 (795)
T 4a2l_A 539 NVTKLFTNCIYE-ASNGIIWV-GTRE-GFYCFNEKDKQIKR 576 (795)
T ss_dssp GGGGSCEEEEEE-CTTSCEEE-EESS-CEEEEETTTTEEEE
T ss_pred CCCCCeeEEEEE-CCCCCEEE-EeCC-CceeECCCCCcEEE
Confidence 01112333333 67777555 4444 58889987765443
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.51 E-value=0.00011 Score=72.88 Aligned_cols=238 Identities=9% Similarity=-0.021 Sum_probs=145.5
Q ss_pred EEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee-CCCcEEEEECCCCcEEEE
Q 009569 276 WFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG-QEEAIRRWDVNSGECLHV 354 (532)
Q Consensus 276 ~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~ 354 (532)
.|.+..+.+ +|+.+. ...|+.+++.... .. ... .....+..++|.+.+..|+.+. ..+.|..++...+.....
T Consensus 80 ~C~~~~~~~-~l~~~~-~~~I~~i~~~~~~-~~--~~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 153 (386)
T 3v65_B 80 SCKALGPEP-VLLFAN-RIDIRQVLPHRSE-YT--LLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 153 (386)
T ss_dssp CEEECSSCC-EEEEEC-BSCEEEECTTSCC-CE--EEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE
T ss_pred eECCccccc-eeEeec-CccceeeccCCCc-EE--EEe-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE
Confidence 355555533 444443 3567777776432 21 222 2334578999998666555544 567899999987664444
Q ss_pred eeccCCceEEEEEeeCCCeE-EEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CC-CeEEEEECC
Q 009569 355 YEKTGVGLISCGWFLDGGGI-FAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-RE-AAILLLDRE 431 (532)
Q Consensus 355 ~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d-g~I~iwd~~ 431 (532)
+.........+++.+.+..| ++-...+.|.+.++++................++++|.+..|+.+. .. +.|..++..
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 44333445678888755554 4555667899999987654444443334689999999777666655 33 689999987
Q ss_pred CCce-eee-ecCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCC
Q 009569 432 ANFE-RWI-EEEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSED 508 (532)
Q Consensus 432 ~~~~-~~~-~~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~d 508 (532)
.... .+. ..-.....++|+|++..|+.+. ..+.|..+|+... .....+.........+.+ ..+.++++-...
T Consensus 234 G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~P~giav----~~~~ly~td~~~ 308 (386)
T 3v65_B 234 GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQGLPHPFAITV----FEDSLYWTDWHT 308 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC-SCEEEECSSCSSEEEEEE----ETTEEEEEETTT
T ss_pred CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC-eeEEEEECCCCCceEEEE----ECCEEEEeeCCC
Confidence 6653 222 2234578999998776666654 4678999998654 222222222222223333 234566666678
Q ss_pred CcEEEEeCCCCCceee
Q 009569 509 SQVNIFLSFSPFAKKI 524 (532)
Q Consensus 509 g~i~iw~~~~~~~~~~ 524 (532)
+.|..++..++.....
T Consensus 309 ~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 309 KSINSANKFTGKNQEI 324 (386)
T ss_dssp TEEEEEETTTCCSCEE
T ss_pred CeEEEEECCCCcceEE
Confidence 8899998666654433
No 259
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.51 E-value=9.3e-05 Score=68.19 Aligned_cols=200 Identities=10% Similarity=0.080 Sum_probs=128.3
Q ss_pred EcccccccEEEEEEccCCCEEE-EEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEE
Q 009569 267 ILEAHSDEVWFLQFSHDGKYLA-SSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWD 345 (532)
Q Consensus 267 ~l~~h~~~V~~v~~s~~g~~la-s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 345 (532)
.+.+-.+.+..++|+|++..|+ +...++.|...|.. + .+.....+.+. ...-.+++.+++.++++.-.++.+.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g-~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G-DLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-C-CEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C-CEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 4556667899999999766554 56677888887876 3 33222333332 5578899999888777766678899998
Q ss_pred CCCCcE---EEEee------ccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC----CeEEEee------cCccCceEE
Q 009569 346 VNSGEC---LHVYE------KTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG----RELESWK------GQKTLRISD 406 (532)
Q Consensus 346 ~~~~~~---~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~------~~~~~~v~~ 406 (532)
+..... +.... ........++|+|.++.|+++.......+|.+++ ..+.... ......+.+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 865432 22221 1234568999999988888877655555555432 1121111 112235789
Q ss_pred EEEeeCCC-EEEEEECCCeEEEEECCCCceeeeecC----------CceeEEEEcCCCCEEEEEecCCeEEEEec
Q 009569 407 MAITDDGK-RIISICREAAILLLDREANFERWIEEE----------EVITSFSLSKDNKYLLVNLINQEIHLWSI 470 (532)
Q Consensus 407 ~~~s~~~~-~l~~~~~dg~I~iwd~~~~~~~~~~~~----------~~i~~~~~sp~~~~l~~~~~dg~i~iwd~ 470 (532)
++++|... +++.+.....+.++|............ .....|+|.++|+..++ ++.+.++.+.-
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 99999655 455555778899999876652222211 35689999999985444 66777777653
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.51 E-value=1.3e-05 Score=83.86 Aligned_cols=232 Identities=13% Similarity=0.047 Sum_probs=139.3
Q ss_pred CCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCC--CCCEEEEeeC------CCcEEEEECCCCcEEEEe
Q 009569 284 GKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSP--NDHQLLTCGQ------EEAIRRWDVNSGECLHVY 355 (532)
Q Consensus 284 g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~--~~~~l~s~~~------dg~i~iwd~~~~~~~~~~ 355 (532)
+..++.++.|+.+..+|..++... -......+... ..+.-+| .+..++.++. ++.|..+|..+|+.+..+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~-W~~~~~~~~~~-~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKIN-WEVEVCDPKVG-STLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEE-EEEECCCGGGT-CBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEE-EEecCCCCCcc-ceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 557778888999999999877432 22222221100 0111112 1334555544 789999999999998776
Q ss_pred eccCCc-------------------------------------e-EEEEEeeCCCeEEEEeCC----------------C
Q 009569 356 EKTGVG-------------------------------------L-ISCGWFLDGGGIFAGMTD----------------K 381 (532)
Q Consensus 356 ~~~~~~-------------------------------------i-~~~~~~~~~~~l~~~~~d----------------g 381 (532)
...... + ..+++.++...++.++.+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 532211 0 134566666677776532 3
Q ss_pred cEEEEECCCCeEEEeec-C-cc-------CceEEEEEeeCCC---EEEEEECCCeEEEEECCCCceeee-ecC-------
Q 009569 382 SICLWDLDGRELESWKG-Q-KT-------LRISDMAITDDGK---RIISICREAAILLLDREANFERWI-EEE------- 441 (532)
Q Consensus 382 ~i~iwd~~~~~~~~~~~-~-~~-------~~v~~~~~s~~~~---~l~~~~~dg~I~iwd~~~~~~~~~-~~~------- 441 (532)
.|..+|.++++..-... . +. ....-+...++|+ .++.++.+|.++++|..+++.... ...
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 59999998766543221 1 10 0111122234674 577788999999999998872211 100
Q ss_pred -------Cce--------------------------eEEEEcCCCCEEEEEec---------------------------
Q 009569 442 -------EVI--------------------------TSFSLSKDNKYLLVNLI--------------------------- 461 (532)
Q Consensus 442 -------~~i--------------------------~~~~~sp~~~~l~~~~~--------------------------- 461 (532)
.++ ..++++|+..++++...
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 111 24678888888877643
Q ss_pred ----------CCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 462 ----------NQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 462 ----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
+|.|..||+.++ +.+-++...... .. ... ...+..++.++.||.|+.||..+++..
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG-~~~W~~~~~~~~-~~--~~~-~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTG-KAKWTKWEKFAA-WG--GTL-YTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTC-CEEEEEEESSCC-CS--BCE-EETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCccccCCCCCCeEEEEECCCC-CEEEEecCCCCc-cc--eeE-EECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 478999999988 666665432211 00 111 223567777999999999999998754
No 261
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.50 E-value=0.00017 Score=71.70 Aligned_cols=228 Identities=7% Similarity=-0.055 Sum_probs=142.8
Q ss_pred EEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee-CCCcEEEEECCCC----cEEEEeeccCC
Q 009569 286 YLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG-QEEAIRRWDVNSG----ECLHVYEKTGV 360 (532)
Q Consensus 286 ~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~----~~~~~~~~~~~ 360 (532)
+|+.+. ...|+..++..... .. +......+..++|++.+..|+.+. ..+.|+.+++... .....+.....
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~-~~---~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEY-TS---LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSC-EE---EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred eeEEec-cceeEEEccCCcce-eE---eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 444443 45788878764322 11 223445688999998766666554 4678999998652 22333333445
Q ss_pred ceEEEEEeeC-CCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC--CCeEEEEECCCCc-ee
Q 009569 361 GLISCGWFLD-GGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR--EAAILLLDREANF-ER 436 (532)
Q Consensus 361 ~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~I~iwd~~~~~-~~ 436 (532)
....+++.+. ++.+++-...+.|.+.++++................++++|.+..|+.+.. .+.|...++.... ..
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 6788999874 444555556789999999887655555434346899999997776666653 3789999987765 33
Q ss_pred eee-cCCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEecc--ccceEEEEEccCCCCCcEEEEEeCCCcEE
Q 009569 437 WIE-EEEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKGH--KRARFVIRSCFGGFEQAFIASGSEDSQVN 512 (532)
Q Consensus 437 ~~~-~~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~i~~~~~s~d~~~l~sgs~dg~i~ 512 (532)
+.. .-.....|+++|++..|+.+. ..+.|..+|+... ......... ......+.+ + .+.++++-...+.|.
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~l~~P~gl~v-~---~~~lywtd~~~~~V~ 314 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAV-F---EDKVFWTDIINEAIF 314 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-CCEEEEECSSTTSSEEEEEE-E---TTEEEEEESSSCSEE
T ss_pred EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC-ccEEEEeCCCCCCCCEEEEE-e---CCEEEEecCCCCeEE
Confidence 322 235688999999887777665 4578999998654 222222221 122222322 2 345566666778899
Q ss_pred EEeCCCCCcee
Q 009569 513 IFLSFSPFAKK 523 (532)
Q Consensus 513 iw~~~~~~~~~ 523 (532)
.++..++....
T Consensus 315 ~~~~~~G~~~~ 325 (400)
T 3p5b_L 315 SANRLTGSDVN 325 (400)
T ss_dssp EEESSSCCCCE
T ss_pred EEEcCCCCceE
Confidence 99977765443
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.49 E-value=4.7e-05 Score=76.62 Aligned_cols=153 Identities=12% Similarity=0.114 Sum_probs=98.1
Q ss_pred cEEEEEEcc-CCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC-C----cEEEEECC
Q 009569 274 EVWFLQFSH-DGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE-E----AIRRWDVN 347 (532)
Q Consensus 274 ~V~~v~~s~-~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-g----~i~iwd~~ 347 (532)
....++++| ++..|..+...+.|+.+|...+ .+ ..+.........++|++++++|+.+... + .+.+.+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-~v---~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-YV---STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT-EE---EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC-EE---EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-
Confidence 457899998 4555665555578888888743 22 2223345568899999999966666542 2 2433443
Q ss_pred CCcEE--EEeeccCCceEEEEEee-CCCeEEEEeCCCcEEEEECCCCeEEEee-cCccCceEEEEEeeCCCEEEEE-ECC
Q 009569 348 SGECL--HVYEKTGVGLISCGWFL-DGGGIFAGMTDKSICLWDLDGRELESWK-GQKTLRISDMAITDDGKRIISI-CRE 422 (532)
Q Consensus 348 ~~~~~--~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~-~~d 422 (532)
.+... ..+.. ......++++| ++..+++-..++.|..++..+.....+. .........++|+|+|++|+.+ ...
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 33221 22222 23456788999 6666666667789999999877653332 2222357899999999955554 467
Q ss_pred CeEEEEECCC
Q 009569 423 AAILLLDREA 432 (532)
Q Consensus 423 g~I~iwd~~~ 432 (532)
+.|..++...
T Consensus 292 ~~I~~~~~d~ 301 (430)
T 3tc9_A 292 HYILRSDYDW 301 (430)
T ss_dssp TEEEEEEEET
T ss_pred CEEEEEeCCc
Confidence 8899988654
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.48 E-value=0.00017 Score=70.43 Aligned_cols=197 Identities=10% Similarity=0.015 Sum_probs=126.8
Q ss_pred ccEEEEEEccCCCEE-EEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEE-EEeeCCCcEEEEECCCCc
Q 009569 273 DEVWFLQFSHDGKYL-ASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQL-LTCGQEEAIRRWDVNSGE 350 (532)
Q Consensus 273 ~~V~~v~~s~~g~~l-as~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~~~dg~i~iwd~~~~~ 350 (532)
..+..++|++.+..| ++-...+.|..++...... .. .+.........+++.+.+..| ++-...+.|.+.+.....
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~--~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EE--VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE--EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCc-eE--EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 457899999855555 4545678888888874321 11 122222345678888755444 454556789999987554
Q ss_pred EEEEeeccCCceEEEEEeeCCCeEEEEe-CC-CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCCeEEE
Q 009569 351 CLHVYEKTGVGLISCGWFLDGGGIFAGM-TD-KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-REAAILL 427 (532)
Q Consensus 351 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~i 427 (532)
....+...-.....+++.|.+..++.+. .. +.|..+++++.....+..........++++|++..|+.+. ..+.|..
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 4333433445678999999666555544 44 7899999987655554433334688999998777666665 5678999
Q ss_pred EECCCCc-eeee-ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 428 LDREANF-ERWI-EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 428 wd~~~~~-~~~~-~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
+|+.... ..+. ........+++. .+..+++-...+.|..++..++
T Consensus 230 ~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 230 ANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred EeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCC
Confidence 9987654 3322 223456778883 4555555556778888885554
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.47 E-value=0.00042 Score=66.52 Aligned_cols=205 Identities=11% Similarity=-0.006 Sum_probs=130.6
Q ss_pred cccEEEEEEccCCCEE-EEEeCCCeEEEEEeecC---CeeEEEEEeecCCCCeEEEEeCCCCCEE-EEeeCCCcEEEEEC
Q 009569 272 SDEVWFLQFSHDGKYL-ASSSKDQSAIIWEVKED---GQVSLKHRLSGHRKPVFTVSWSPNDHQL-LTCGQEEAIRRWDV 346 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~l-as~s~dg~i~iwd~~~~---~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~~~dg~i~iwd~ 346 (532)
-..+..++|++.+..| ++-..++.|..++.... ... ...+...-.....+++.+.+..| ++-...+.|.+.+.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~--~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY--DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------C--EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCccc--EEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 3457899999865544 45556789999988741 111 11222222345788888655544 44456789999998
Q ss_pred CCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCC--CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCC
Q 009569 347 NSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTD--KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-REA 423 (532)
Q Consensus 347 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg 423 (532)
........+.........+++.|.+..++.+... +.|..+++++.....+....-.....+++++++..|+.+. ..+
T Consensus 107 ~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 7554443444344567899999966666655542 6899999987655544333334688999999877776665 567
Q ss_pred eEEEEECCCCc-eeeeec---CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEE
Q 009569 424 AILLLDREANF-ERWIEE---EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRY 480 (532)
Q Consensus 424 ~I~iwd~~~~~-~~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 480 (532)
.|..+|+.... ..+... ......+++. .+.++++-...+.|..+|..++ +.+..+
T Consensus 187 ~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g-~~~~~i 245 (316)
T 1ijq_A 187 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG-SDVNLL 245 (316)
T ss_dssp EEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC-CCCEEE
T ss_pred eEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC-cceEEE
Confidence 89999998654 333221 2346778885 3555555556788999997665 444444
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.47 E-value=0.00013 Score=79.76 Aligned_cols=238 Identities=8% Similarity=0.001 Sum_probs=151.1
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEe------ecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEE
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRL------SGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWD 345 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~------~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 345 (532)
...|.++...++|.+ ..|+.++-|..|+..++ .+.....- ......|.++...+++..|..|+.++-|.+||
T Consensus 356 ~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQ-RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp CSSEEEEEECTTSCE-EEEESSSCEEEECTTTC-CEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CCeeEEEEECCCCCE-EEEECCCCeEEEcCCCC-cEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 456999999888874 45677777888987654 22221100 01245789999888888566777777899999
Q ss_pred CCCCcEEEEee----ccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecC------ccCceEEEEEeeCCCE
Q 009569 346 VNSGECLHVYE----KTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQ------KTLRISDMAITDDGKR 415 (532)
Q Consensus 346 ~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~~v~~~~~s~~~~~ 415 (532)
..+++...... .....|.++...++|... +|+. +.+.+||..++....+... ....|.++...++|..
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 511 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNLW-LGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRL 511 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSSSCEE-EEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCE
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCCCCEE-EEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCE
Confidence 98876543321 124568888888777644 4555 4588999988776655422 2247899999988876
Q ss_pred EEEEECCCeEEEEECCCCceeee-------ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEecccc--c
Q 009569 416 IISICREAAILLLDREANFERWI-------EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKR--A 486 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~~~~~~~-------~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~ 486 (532)
.+. +. +-|..||..+....+. .....|.++..+++|.+.+.. .. .|..||..+. ....+..... .
T Consensus 512 Wig-t~-~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~--~~~~~~~~~gl~~ 585 (795)
T 4a2l_A 512 WIG-GE-EGLSVFKQEGLDIQKASILPVSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDK--QIKRYNTTNGLPN 585 (795)
T ss_dssp EEE-ES-SCEEEEEEETTEEEECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTT--EEEEECGGGTCSC
T ss_pred EEE-eC-CceEEEeCCCCeEEEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCC--cEEEeCCCCCCch
Confidence 554 44 5688888876553111 123468899999988855544 34 5888997665 3334432111 1
Q ss_pred eEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 487 RFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 487 ~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
..+..+.. .++|.+.+++ . +-|..|+..++...
T Consensus 586 ~~i~~i~~-d~~g~lWi~t-~-~Gl~~~~~~~~~~~ 618 (795)
T 4a2l_A 586 NVVYGILE-DSFGRLWLST-N-RGISCFNPETEKFR 618 (795)
T ss_dssp SCEEEEEE-CTTSCEEEEE-T-TEEEEEETTTTEEE
T ss_pred hheEEEEE-CCCCCEEEEc-C-CceEEEcCCCCcEE
Confidence 11223333 6677765544 3 45778888766443
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.45 E-value=0.00015 Score=71.76 Aligned_cols=205 Identities=10% Similarity=0.021 Sum_probs=130.0
Q ss_pred cccEEEEEEccCCCE-EEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEE-EEeeCCCcEEEEECCCC
Q 009569 272 SDEVWFLQFSHDGKY-LASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQL-LTCGQEEAIRRWDVNSG 349 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~-las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~~~dg~i~iwd~~~~ 349 (532)
...+..++|.+.+.. +++-...+.|..++..... . ...+.........+++.+.+..| ++-...+.|.+.++...
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~-~--~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSN-V--EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-E--EEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC-c--EEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence 345788999985554 4455567888888887432 1 12222222344567888755544 44445678888888755
Q ss_pred cEEEEeeccCCceEEEEEeeCCCeEEEEe-CC-CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCCeEE
Q 009569 350 ECLHVYEKTGVGLISCGWFLDGGGIFAGM-TD-KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-REAAIL 426 (532)
Q Consensus 350 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~ 426 (532)
.....+.........+++.|.+..++.+. .. +.|..+++++.....+..........++++|++..|+.+. ..+.|.
T Consensus 192 ~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~ 271 (386)
T 3v65_B 192 HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE 271 (386)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEE
T ss_pred ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEE
Confidence 43333443445678999998766666554 34 6899999987655444433333678999998777666655 567899
Q ss_pred EEECCCCc-eeeee-cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEe
Q 009569 427 LLDREANF-ERWIE-EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYK 481 (532)
Q Consensus 427 iwd~~~~~-~~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 481 (532)
.+|+.... ..+.. .......+++ ..+.++++....+.|..+|..++ +.+..+.
T Consensus 272 ~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G-~~~~~i~ 326 (386)
T 3v65_B 272 RANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG-KNQEIIR 326 (386)
T ss_dssp EECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC-CSCEEEE
T ss_pred EEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC-cceEEEc
Confidence 99987654 33322 2345678888 34555556666788988886555 4444443
No 267
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.45 E-value=0.00057 Score=67.97 Aligned_cols=209 Identities=11% Similarity=-0.013 Sum_probs=133.6
Q ss_pred ccccEEEEEEccCCCEEE-EEeCCCeEEEEEeecCCe-eEEEEEeecCCCCeEEEEeCCCCC-EEEEeeCCCcEEEEECC
Q 009569 271 HSDEVWFLQFSHDGKYLA-SSSKDQSAIIWEVKEDGQ-VSLKHRLSGHRKPVFTVSWSPNDH-QLLTCGQEEAIRRWDVN 347 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~la-s~s~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~~~dg~i~iwd~~ 347 (532)
....+..++|++.+..|. +-...+.|+.+++..... ......+.........+++.+.+. +.++-...+.|.+.+++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 445788999998655554 445678888888764210 011122232345677888887444 44444557889999987
Q ss_pred CCcEEEEeeccCCceEEEEEeeCCCeEEEEeC--CCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCCe
Q 009569 348 SGECLHVYEKTGVGLISCGWFLDGGGIFAGMT--DKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-REAA 424 (532)
Q Consensus 348 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~ 424 (532)
.......+.........+++.|.+..|+.+.. .+.|...++++.....+....-.....|++++++..|+.+. ..+.
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 66555455444456789999997666666542 47899999987655554443334789999999887777765 5678
Q ss_pred EEEEECCCCc-eeeeec---CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEe
Q 009569 425 ILLLDREANF-ERWIEE---EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYK 481 (532)
Q Consensus 425 I~iwd~~~~~-~~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 481 (532)
|..+|+.... ..+... ......+++. .+.++++-...+.|..+|..++ +.+..+.
T Consensus 270 I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G-~~~~~i~ 328 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG-SDVNLLA 328 (400)
T ss_dssp EEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSC-CCCEEEE
T ss_pred EEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCC-CceEEEe
Confidence 9999997765 333322 2345577773 3445555556778999997666 4445544
No 268
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.43 E-value=8.1e-05 Score=67.66 Aligned_cols=166 Identities=15% Similarity=0.125 Sum_probs=109.3
Q ss_pred EEEEEeecCCC--CeEEEEeCCCCCEEEEeeCCC--cEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEE-EeCCCc
Q 009569 308 SLKHRLSGHRK--PVFTVSWSPNDHQLLTCGQEE--AIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFA-GMTDKS 382 (532)
Q Consensus 308 ~~~~~~~~h~~--~v~~l~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~ 382 (532)
+.+..+ .|.. -...+.|++ +.+..+.+.+| .|+.+|+.+++.+..+..... .......+.++.++. .-.++.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCE
Confidence 345555 3443 456899986 56666666654 899999999999888764432 222323333455544 456889
Q ss_pred EEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eeee---ecC---CceeEEEEcCCCCE
Q 009569 383 ICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-ERWI---EEE---EVITSFSLSKDNKY 455 (532)
Q Consensus 383 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~---~~~---~~i~~~~~sp~~~~ 455 (532)
+.+||.++.++........ . ...+++++..|+.+..++.|.++|..+.+ ...+ .+. ..++.+.+. +|+.
T Consensus 87 v~v~D~~tl~~~~ti~~~~-~--Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l 162 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPG-E--GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL 162 (243)
T ss_dssp EEEEETTTTEEEEEEECSS-C--CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCcCcEEEEEeCCC-C--ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence 9999998876655444332 2 23445677777777788999999999877 2211 121 234566666 6665
Q ss_pred EEEEecCCeEEEEecCCCCcceeEEe
Q 009569 456 LLVNLINQEIHLWSIESDPKLVSRYK 481 (532)
Q Consensus 456 l~~~~~dg~i~iwd~~~~~~~~~~~~ 481 (532)
.+..-.+..|.+.|..++ +.+..+.
T Consensus 163 yanvw~s~~I~vIDp~tG-~V~~~id 187 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASG-KVVAWID 187 (243)
T ss_dssp EEEETTTTEEEEECTTTC-BEEEEEE
T ss_pred EEEECCCCeEEEEECCCC-CEEEEEE
Confidence 544446889999999998 7777765
No 269
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.41 E-value=1.2e-05 Score=87.11 Aligned_cols=192 Identities=11% Similarity=0.073 Sum_probs=114.9
Q ss_pred CeEEEEeC-CCCCEEEEeeC-CC----cEEEEECCCC-cEEE-EeeccCCceEEEEEeeCCCeEEEEeCC-----CcEEE
Q 009569 319 PVFTVSWS-PNDHQLLTCGQ-EE----AIRRWDVNSG-ECLH-VYEKTGVGLISCGWFLDGGGIFAGMTD-----KSICL 385 (532)
Q Consensus 319 ~v~~l~~s-~~~~~l~s~~~-dg----~i~iwd~~~~-~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i 385 (532)
.+...+|| |||++|+.+.. +| .|+++|+.++ +.+. .+. .....+.|+||++.|+....+ ..|+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57789999 99998876543 22 5999999998 6321 111 113467899999888877654 26888
Q ss_pred EECCCCe---EEEeecCccCceEEEEEeeCCCEEEEEEC---CCeEEEEECCCCc--e--e-eee-cCCceeEEEEcCCC
Q 009569 386 WDLDGRE---LESWKGQKTLRISDMAITDDGKRIISICR---EAAILLLDREANF--E--R-WIE-EEEVITSFSLSKDN 453 (532)
Q Consensus 386 wd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~I~iwd~~~~~--~--~-~~~-~~~~i~~~~~sp~~ 453 (532)
+++.+.. ...+..........+.|+|||++|+..+. ...|+++|+.+.. . . +.. ......++.|+.++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 8887642 22222222235678899999998887663 4468999998753 2 2 222 23445556555444
Q ss_pred CEEEEEecC----CeEEEEecCCCCcceeE-EeccccceEEEEEccCCCCCcEEEEEeCCCc--EEEEeC
Q 009569 454 KYLLVNLIN----QEIHLWSIESDPKLVSR-YKGHKRARFVIRSCFGGFEQAFIASGSEDSQ--VNIFLS 516 (532)
Q Consensus 454 ~~l~~~~~d----g~i~iwd~~~~~~~~~~-~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~--i~iw~~ 516 (532)
.+++....+ ..|..+|+.+. ..... +..+.....+..+.+ . .+.++++...+|. |+++++
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~-~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAV-R-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEE-C-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEE-E-CCEEEEEEEeCCEEEEEEEec
Confidence 444444443 25777777642 12223 333433333333333 2 3456677777886 555564
No 270
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.41 E-value=2.4e-05 Score=81.93 Aligned_cols=227 Identities=13% Similarity=0.054 Sum_probs=135.9
Q ss_pred EEEEeCCCeEEEEEeecCCeeEEEEEeecCC--CCeEE-EEeCCCCCEEEEee------CCCcEEEEECCCCcEEEEeec
Q 009569 287 LASSSKDQSAIIWEVKEDGQVSLKHRLSGHR--KPVFT-VSWSPNDHQLLTCG------QEEAIRRWDVNSGECLHVYEK 357 (532)
Q Consensus 287 las~s~dg~i~iwd~~~~~~~~~~~~~~~h~--~~v~~-l~~s~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~ 357 (532)
|+.++.|+.+..+|..++... -......+. ..+.+ .... ++ .+++++ .++.|+.+|.++|+.+..+..
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~-W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETV-WKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEE-EEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEcCCCEEEEEECCCCCEE-EeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 777888999999999887432 112221110 01110 0111 34 455554 379999999999999877653
Q ss_pred cCCc-------------------------------------e-EEEEEeeCCCeEEEEeCC----------------CcE
Q 009569 358 TGVG-------------------------------------L-ISCGWFLDGGGIFAGMTD----------------KSI 383 (532)
Q Consensus 358 ~~~~-------------------------------------i-~~~~~~~~~~~l~~~~~d----------------g~i 383 (532)
.... + ...++.++...++.++.+ +.|
T Consensus 201 ~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceE
Confidence 3211 0 134566777788887765 379
Q ss_pred EEEECCCCeEEEeec-C-cc--------CceEEEEEe-eCC---CEEEEEECCCeEEEEECCCCceeeeec---------
Q 009569 384 CLWDLDGRELESWKG-Q-KT--------LRISDMAIT-DDG---KRIISICREAAILLLDREANFERWIEE--------- 440 (532)
Q Consensus 384 ~iwd~~~~~~~~~~~-~-~~--------~~v~~~~~s-~~~---~~l~~~~~dg~I~iwd~~~~~~~~~~~--------- 440 (532)
.-+|.+++++.-... . +. .++. +... .+| ..++.++.+|.++++|.++++......
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~ 359 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccc
Confidence 999998876643222 1 11 0111 1222 467 467778899999999999887221111
Q ss_pred ------CCce--------------------------eEEEEcCCCCEEEEEe----------------------------
Q 009569 441 ------EEVI--------------------------TSFSLSKDNKYLLVNL---------------------------- 460 (532)
Q Consensus 441 ------~~~i--------------------------~~~~~sp~~~~l~~~~---------------------------- 460 (532)
..++ ..++++|+..++++..
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceec
Confidence 0111 2467788777766542
Q ss_pred -----------cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 461 -----------INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 461 -----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
..|.|..||+.++ +.+-+....... . .... ...+.+++.++.||.++.||.++|+..
T Consensus 440 ~~p~~~~~~~~~~G~l~A~D~~tG-~~~W~~~~~~~~-~--~g~~-~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQIKAYNAITG-DYKWEKMERFAV-W--GGTM-ATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTC-CEEEEEEESSCC-C--SBCE-EETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCCcCCcccCCCcCeEEEEECCCC-CEEeEecCCCCc-c--Ccce-EecCCEEEEECCCCeEEEEECCCCCEE
Confidence 2467888898887 665555321110 0 0001 224567788999999999999998743
No 271
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.40 E-value=0.00014 Score=73.09 Aligned_cols=191 Identities=10% Similarity=0.057 Sum_probs=114.8
Q ss_pred cEEEEEEccC--CCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCC-----cEEEEEC
Q 009569 274 EVWFLQFSHD--GKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEE-----AIRRWDV 346 (532)
Q Consensus 274 ~V~~v~~s~~--g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg-----~i~iwd~ 346 (532)
....++|+|+ +..|..+...+.|+.++..++ .+ ..+.........++|+++|+ |+.+...+ .+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g-~v---~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ-YV---DIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTT-EE---EEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCC-EE---EEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4568999985 334444443388999988644 22 23333445688999999999 44444321 2333332
Q ss_pred CCCcE-EEEeeccCCceEEEEEee-CCCeEEEEeCCCcEEEEECCCCeE-EEee-cCccCceEEEEEeeCCCEEEEEE-C
Q 009569 347 NSGEC-LHVYEKTGVGLISCGWFL-DGGGIFAGMTDKSICLWDLDGREL-ESWK-GQKTLRISDMAITDDGKRIISIC-R 421 (532)
Q Consensus 347 ~~~~~-~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~-~~~~-~~~~~~v~~~~~s~~~~~l~~~~-~ 421 (532)
..+.. ...+. .......++++| ++..+++-..++.|+.+|..++.+ ..+. ......-..++|+|+++.|+.+. .
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 22211 01121 233456788999 666555655678899999985554 2222 12222345799999999655554 5
Q ss_pred CCeEEEEECCC--Cc----eeeeec---------------CCceeEEEE---------cCCCCEEEEEecCCeEEEEec
Q 009569 422 EAAILLLDREA--NF----ERWIEE---------------EEVITSFSL---------SKDNKYLLVNLINQEIHLWSI 470 (532)
Q Consensus 422 dg~I~iwd~~~--~~----~~~~~~---------------~~~i~~~~~---------sp~~~~l~~~~~dg~i~iwd~ 470 (532)
.+.|+.++... +. ..+.+. -.....+++ .+++.++++-...+.|+.++.
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 68899988653 21 112111 123567899 677777777666788999884
No 272
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.37 E-value=3.5e-05 Score=82.22 Aligned_cols=161 Identities=13% Similarity=0.153 Sum_probs=109.9
Q ss_pred EEEeCCCCCEEEEeeCCC-------------------cEEEEECCCCcEEEEeecc--C-------CceEEEEEeeCCC-
Q 009569 322 TVSWSPNDHQLLTCGQEE-------------------AIRRWDVNSGECLHVYEKT--G-------VGLISCGWFLDGG- 372 (532)
Q Consensus 322 ~l~~s~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~--~-------~~i~~~~~~~~~~- 372 (532)
.+++.|+...++.++.++ .|..+|.++|+.+..++.. . .+.....+..+|+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 467778778888887765 4999999999998887642 1 2233333344665
Q ss_pred --eEEEEeCCCcEEEEECCCCeEEEeecC-c-----------cCc------------------------eEEEEEeeCCC
Q 009569 373 --GIFAGMTDKSICLWDLDGRELESWKGQ-K-----------TLR------------------------ISDMAITDDGK 414 (532)
Q Consensus 373 --~l~~~~~dg~i~iwd~~~~~~~~~~~~-~-----------~~~------------------------v~~~~~s~~~~ 414 (532)
.++.++.+|.++++|.+++++..-... . ..+ -..++++|+..
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 688899999999999987765421100 0 000 11267888777
Q ss_pred EEEEEE------------------------------------CCCeEEEEECCCCceee-eecCCceeEEEEcCCCCEEE
Q 009569 415 RIISIC------------------------------------REAAILLLDREANFERW-IEEEEVITSFSLSKDNKYLL 457 (532)
Q Consensus 415 ~l~~~~------------------------------------~dg~I~iwd~~~~~~~~-~~~~~~i~~~~~sp~~~~l~ 457 (532)
.+++.. .+|.|..||..+++... .....+.....+...+.+++
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf 473 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVF 473 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEE
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEE
Confidence 665421 23789999999988322 23334444445555788999
Q ss_pred EEecCCeEEEEecCCCCcceeEEecc
Q 009569 458 VNLINQEIHLWSIESDPKLVSRYKGH 483 (532)
Q Consensus 458 ~~~~dg~i~iwd~~~~~~~~~~~~~~ 483 (532)
+++.||.++.||.+++ +.+..+...
T Consensus 474 ~g~~dg~l~a~d~~tG-~~l~~~~~~ 498 (668)
T 1kv9_A 474 QGTAAGQMHAYSADKG-EALWQFEAQ 498 (668)
T ss_dssp EECTTSEEEEEETTTC-CEEEEEECS
T ss_pred EECCcccchhhhhhcC-hhheEecCC
Confidence 9999999999999998 788777654
No 273
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.34 E-value=0.00018 Score=75.21 Aligned_cols=231 Identities=15% Similarity=0.125 Sum_probs=136.5
Q ss_pred CCEEEEEeCCCeEEEEEeecCCeeEEEEEeecC-------CCCeEEEEeC-CCCC-EEEEee------CCCcEEEEECCC
Q 009569 284 GKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH-------RKPVFTVSWS-PNDH-QLLTCG------QEEAIRRWDVNS 348 (532)
Q Consensus 284 g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h-------~~~v~~l~~s-~~~~-~l~s~~------~dg~i~iwd~~~ 348 (532)
+..++.++.|+.|..+|..++... -......+ ..++ +.=. .+++ .+++++ .++.|..+|..+
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~-W~~~~~~~~~~~~~~~sP~--v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t 193 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVV-WKKKFADHGAGYTMTGAPT--IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT 193 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEE-EEEECSCGGGTCBCCSCCE--EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTT
T ss_pred CCEEEEEeCCCEEEEEECCCCCEE-eeecCCCCCcCcccccCCE--EeCCCcCCcEEEEEeccccccCCCCEEEEEECCC
Confidence 456777888999999999887532 11222111 1111 1100 1233 566654 378999999999
Q ss_pred CcEEEEeeccCCce-----------------------------------------EEEEEeeCCCeEEEEeC--------
Q 009569 349 GECLHVYEKTGVGL-----------------------------------------ISCGWFLDGGGIFAGMT-------- 379 (532)
Q Consensus 349 ~~~~~~~~~~~~~i-----------------------------------------~~~~~~~~~~~l~~~~~-------- 379 (532)
|+.+.........+ ...++.|+...++++..
T Consensus 194 G~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~ 273 (582)
T 1flg_A 194 GEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTW 273 (582)
T ss_dssp CCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGG
T ss_pred CCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCc
Confidence 99887654321000 12456666677777663
Q ss_pred ------------C----CcEEEEECCCCeEEEeec--CccC----ceEE-EEEe---eCCC---EEEEEECCCeEEEEEC
Q 009569 380 ------------D----KSICLWDLDGRELESWKG--QKTL----RISD-MAIT---DDGK---RIISICREAAILLLDR 430 (532)
Q Consensus 380 ------------d----g~i~iwd~~~~~~~~~~~--~~~~----~v~~-~~~s---~~~~---~l~~~~~dg~I~iwd~ 430 (532)
| +.|.-+|.++++..-... ++.. .+.. +.+. .+|+ .++.++.+|.++++|.
T Consensus 274 ~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~ 353 (582)
T 1flg_A 274 ARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDR 353 (582)
T ss_dssp GGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEET
T ss_pred ccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEEC
Confidence 2 579999998776543321 1110 0111 2222 4674 6788899999999999
Q ss_pred CCCceeeee-cC--------------Cc--------------------------------eeEEEEcCCCCEEEEEe---
Q 009569 431 EANFERWIE-EE--------------EV--------------------------------ITSFSLSKDNKYLLVNL--- 460 (532)
Q Consensus 431 ~~~~~~~~~-~~--------------~~--------------------------------i~~~~~sp~~~~l~~~~--- 460 (532)
.+++..... .. .+ -..++++|+...+++..
T Consensus 354 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~ 433 (582)
T 1flg_A 354 SNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHW 433 (582)
T ss_dssp TTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECE
T ss_pred CCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhc
Confidence 988722110 00 00 01356777766666543
Q ss_pred ------------------------------cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCc
Q 009569 461 ------------------------------INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQ 510 (532)
Q Consensus 461 ------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~ 510 (532)
.+|.|..||+.++ +.+-+....... .. ... ...+.+++.|+.||.
T Consensus 434 ~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG-~~~W~~~~~~~~-~~--g~~-~tagglvf~g~~dg~ 508 (582)
T 1flg_A 434 KEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSG-KVVWEHKEHLPL-WA--GVL-ATAGNLVFTGTGDGY 508 (582)
T ss_dssp EEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTC-CEEEEEEESSCC-CS--CCE-EETTTEEEEECTTSE
T ss_pred ceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCC-CEEEEecCCCCC-cc--cce-EeCCCEEEEECCCCc
Confidence 2578999999988 666555432211 00 001 123567888999999
Q ss_pred EEEEeCCCCCce
Q 009569 511 VNIFLSFSPFAK 522 (532)
Q Consensus 511 i~iw~~~~~~~~ 522 (532)
++.||.++|+..
T Consensus 509 l~A~D~~tG~~l 520 (582)
T 1flg_A 509 FKAFDAKSGKEL 520 (582)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECCCCCEE
Confidence 999999998743
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.34 E-value=0.00028 Score=67.36 Aligned_cols=201 Identities=9% Similarity=0.039 Sum_probs=123.1
Q ss_pred EEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCC--cEEEE
Q 009569 309 LKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDK--SICLW 386 (532)
Q Consensus 309 ~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iw 386 (532)
....+... .....++|+++++++++-..++.|..||.... ....+. ....+..+++.++++.+++..... .|..+
T Consensus 24 ~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 24 IITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp EEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred EeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEE
Confidence 34444332 45678999999987777667889999998653 333333 345688999999998666554322 47777
Q ss_pred ECCCCeEEEeecC-ccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eee-e----------ecCCceeEEEEcCCC
Q 009569 387 DLDGRELESWKGQ-KTLRISDMAITDDGKRIISICREAAILLLDREANF-ERW-I----------EEEEVITSFSLSKDN 453 (532)
Q Consensus 387 d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~-~----------~~~~~i~~~~~sp~~ 453 (532)
|..++.+..+... .......++..+++..+++-..++.|+++|..+.. ... . ..-.....+ +|++
T Consensus 101 d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 101 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFG 178 (306)
T ss_dssp ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEET
T ss_pred cCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCC
Confidence 8777665443322 11234556655555444444468899999987643 111 0 111234455 8888
Q ss_pred CEEEEEe-cCCeEEEEecCCCCcc--eeEEe--ccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 454 KYLLVNL-INQEIHLWSIESDPKL--VSRYK--GHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 454 ~~l~~~~-~dg~i~iwd~~~~~~~--~~~~~--~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
++|+++. ..+.|..||+...... ...+. ..... +++ +++|++.++....+.|.+++.. +..
T Consensus 179 ~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~g-----i~v-d~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDD-----FAF-DVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSS-----EEE-BTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCC-----eEE-CCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 7766654 5678999998752121 11221 11222 233 7888887777778899999976 443
No 275
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.32 E-value=0.0011 Score=63.49 Aligned_cols=222 Identities=13% Similarity=0.022 Sum_probs=136.8
Q ss_pred CCeEEEEEeecCC-eeEEEEEeecCCCCeEEEEeCCCCCEEEEe-eCCCcEEEEECCCCcE-EEEeeccCCceEEEEEee
Q 009569 293 DQSAIIWEVKEDG-QVSLKHRLSGHRKPVFTVSWSPNDHQLLTC-GQEEAIRRWDVNSGEC-LHVYEKTGVGLISCGWFL 369 (532)
Q Consensus 293 dg~i~iwd~~~~~-~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~iwd~~~~~~-~~~~~~~~~~i~~~~~~~ 369 (532)
...|+.+++.... .... .+.+ ...+..++|.+.+..|+.+ ...+.|..++...+.. ...+...-.....+++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~--~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATI--VVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEE--EEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEEEE--EecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc
Confidence 4578888887542 1111 1111 1246689999865555544 4567899999876632 122222334466788887
Q ss_pred CCC-eEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC--CCeEEEEECCCCc-eeee-ecCCce
Q 009569 370 DGG-GIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR--EAAILLLDREANF-ERWI-EEEEVI 444 (532)
Q Consensus 370 ~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~I~iwd~~~~~-~~~~-~~~~~i 444 (532)
.+. .+++-...+.|.++++++................++++|.+..|+.+.. .+.|..++..... ..+. ..-...
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~P 168 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWP 168 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCc
Confidence 444 4455556788999999876544444333346899999997667666663 5789999987654 2222 223457
Q ss_pred eEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEE-eccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCce
Q 009569 445 TSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRY-KGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAK 522 (532)
Q Consensus 445 ~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~ 522 (532)
..++++|++..|+.+. ..+.|..+|+... ....+ .+.......+. . . .+.++++-...+.|..++..++...
T Consensus 169 nglavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~~~~~~~P~gla--v-~-~~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLNFIHKSNLDGT--NRQAVVKGSLPHPFALT--L-F-EDILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEECSCCSCEEEEE--E-E-TTEEEEEETTTTEEEEEETTTCCSC
T ss_pred cEEEEeccCCEEEEEECCCCEEEEEcCCCC--ceEEEecCCCCCceEEE--E-e-CCEEEEEecCCCeEEEEECCCCCce
Confidence 8999999777666664 4678999998754 22222 21222222332 2 2 3455566667788999999777654
Q ss_pred e
Q 009569 523 K 523 (532)
Q Consensus 523 ~ 523 (532)
.
T Consensus 243 ~ 243 (318)
T 3sov_A 243 R 243 (318)
T ss_dssp E
T ss_pred E
Confidence 3
No 276
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.31 E-value=0.00034 Score=64.40 Aligned_cols=201 Identities=13% Similarity=0.155 Sum_probs=128.5
Q ss_pred EEeecCCCCeEEEEeCCCCCEEE-EeeCCCcEEEEECCCCcEEEEeecc-CCceEEEEEeeCCCeEEEEeCCCcEEEEEC
Q 009569 311 HRLSGHRKPVFTVSWSPNDHQLL-TCGQEEAIRRWDVNSGECLHVYEKT-GVGLISCGWFLDGGGIFAGMTDKSICLWDL 388 (532)
Q Consensus 311 ~~~~~h~~~v~~l~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 388 (532)
+.+.+-...+..++|+|++..|+ +...++.|...|.. ++.++.+.-. ....-.+++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 45667777899999999876555 46678899999997 8887777532 345778889888876666657788999987
Q ss_pred CCCe----EEEee-----cCccCceEEEEEeeCCCEEEEEECCCeEEEEECCC----Cceeeee--------cCCceeEE
Q 009569 389 DGRE----LESWK-----GQKTLRISDMAITDDGKRIISICREAAILLLDREA----NFERWIE--------EEEVITSF 447 (532)
Q Consensus 389 ~~~~----~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~----~~~~~~~--------~~~~i~~~ 447 (532)
.... ..... .........++|+|+++.|+++.......+|.+.. ....... ....+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 5322 12221 11223568999999998777776554444444431 1111111 22357899
Q ss_pred EEcCCC-CEEEEEecCCeEEEEecCCCCcceeEEeccc---------cceEEEEEccCCCCCcEEEEEeCCCcEEEEeCC
Q 009569 448 SLSKDN-KYLLVNLINQEIHLWSIESDPKLVSRYKGHK---------RARFVIRSCFGGFEQAFIASGSEDSQVNIFLSF 517 (532)
Q Consensus 448 ~~sp~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~ 517 (532)
+++|.. ++++....+..+..+|... +.+..+.-.. ..... ++| .++|+ |+..++.+.++.|...
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~g--~~~~~~~L~~g~~~l~~~~~qpEG--ia~-d~~G~-lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLVG--EVIGEMSLTKGSRGLSHNIKQAEG--VAM-DASGN-IYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTC--CEEEEEECSTTGGGCSSCCCSEEE--EEE-CTTCC-EEEEETTTEEEEEEC-
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCCC--CEEEEEEcCCccCCcccccCCCCe--eEE-CCCCC-EEEEcCCceEEEEEec
Confidence 999965 4555556677888999764 3444443221 12223 455 88887 5555888888888654
Q ss_pred C
Q 009569 518 S 518 (532)
Q Consensus 518 ~ 518 (532)
.
T Consensus 253 ~ 253 (255)
T 3qqz_A 253 S 253 (255)
T ss_dssp -
T ss_pred C
Confidence 3
No 277
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.31 E-value=0.00024 Score=77.45 Aligned_cols=242 Identities=8% Similarity=0.028 Sum_probs=150.6
Q ss_pred ccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEe-------ecCCCCeEEEEeCCCCCEEEEeeCCCcEEE
Q 009569 271 HSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRL-------SGHRKPVFTVSWSPNDHQLLTCGQEEAIRR 343 (532)
Q Consensus 271 h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~-------~~h~~~v~~l~~s~~~~~l~s~~~dg~i~i 343 (532)
....|.++...++|. |..|+.++-|..|+..+. .+...... ......|.++...++|.+ ..|+.++-|..
T Consensus 311 ~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~ 387 (781)
T 3v9f_A 311 SNASARYIFQDSFNN-IWIGTWGGGINFISNAPP-TFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINV 387 (781)
T ss_dssp SSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCC-SCEEEC----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEE
T ss_pred CCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCC-cceeeccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEE
Confidence 346799999998886 555666677888887643 22222110 112356899998887764 45565666888
Q ss_pred EECCCCcEEEEe---eccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeec--CccCceEEEEEeeCCCEEEE
Q 009569 344 WDVNSGECLHVY---EKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKG--QKTLRISDMAITDDGKRIIS 418 (532)
Q Consensus 344 wd~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~ 418 (532)
||..++...... ......|.++...+++. |.+|+.++-+..+|..++....+.. .....|.++...+++. |..
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwi 465 (781)
T 3v9f_A 388 FENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWI 465 (781)
T ss_dssp EETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEE
T ss_pred EECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEE
Confidence 998655432211 12245688888776665 5567777779999998877766543 1334799998888776 444
Q ss_pred EECCCeEEEEECCCCc-eeeeec------CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEecccc--ceEE
Q 009569 419 ICREAAILLLDREANF-ERWIEE------EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKR--ARFV 489 (532)
Q Consensus 419 ~~~dg~I~iwd~~~~~-~~~~~~------~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~ 489 (532)
++. +-|..||..+.. ..+... ...|.++...++|.+.+ |+.++-+..||..+. .+..+..... ...+
T Consensus 466 gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~--~~~~~~~~~~l~~~~i 541 (781)
T 3v9f_A 466 GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQ--LVRKFNQYEGFCSNTI 541 (781)
T ss_dssp EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCC--EEEEECTTTTCSCSCE
T ss_pred EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCC--eEEEccCCCCCCCCee
Confidence 555 579999988766 222211 35689999999887554 554445888887664 3334432111 1112
Q ss_pred EEEccCCCCCcEEEEEeCCCcEEEEeCCCCCcee
Q 009569 490 IRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 490 i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~~ 523 (532)
..+.. .++|.+.+ |+.+|.|..||..++....
T Consensus 542 ~~i~~-d~~g~lWi-~T~~Glv~~~d~~~~~~~~ 573 (781)
T 3v9f_A 542 NQIYR-SSKGQMWL-ATGEGLVCFPSARNFDYQV 573 (781)
T ss_dssp EEEEE-CTTSCEEE-EETTEEEEESCTTTCCCEE
T ss_pred EEEEE-CCCCCEEE-EECCCceEEECCCCCcEEE
Confidence 23333 66777554 4456765888888765443
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.27 E-value=0.00062 Score=65.32 Aligned_cols=204 Identities=7% Similarity=-0.053 Sum_probs=129.8
Q ss_pred ccEEEEEEccC-CCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCC-EEEEeeCCCcEEEEECCCCc
Q 009569 273 DEVWFLQFSHD-GKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDH-QLLTCGQEEAIRRWDVNSGE 350 (532)
Q Consensus 273 ~~V~~v~~s~~-g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~~~dg~i~iwd~~~~~ 350 (532)
..+..++|.+. +.+..+-...+.|..++.......... +...-.....+++.+.+. +.++-...+.|.+++.....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~--~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV--VVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEE--EEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEE--EcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 35678999985 445555566788888888744211111 112223456788876544 44444556789999987544
Q ss_pred EEEEeeccCCceEEEEEeeCCCeEEEEe--CCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCCeEEE
Q 009569 351 CLHVYEKTGVGLISCGWFLDGGGIFAGM--TDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-REAAILL 427 (532)
Q Consensus 351 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~i 427 (532)
....+.........+++.|.+..++.+. ..+.|...++++.....+....-...+.++++|++..|+.+. ..+.|..
T Consensus 113 ~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 113 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 3333334455678999999766666655 357899999987554444333333678999999777766665 5678999
Q ss_pred EECCCCc-eeeee-cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEE
Q 009569 428 LDREANF-ERWIE-EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRY 480 (532)
Q Consensus 428 wd~~~~~-~~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 480 (532)
+|+.... ..+.. .......+++.. +.++++-...+.|..++..++ +....+
T Consensus 193 ~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G-~~~~~i 245 (318)
T 3sov_A 193 SNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTG-EGLREI 245 (318)
T ss_dssp EETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC-CSCEEE
T ss_pred EcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCC-CceEEE
Confidence 9997654 33332 334567788753 345555556788999998766 444444
No 279
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.20 E-value=0.00036 Score=70.54 Aligned_cols=204 Identities=10% Similarity=0.080 Sum_probs=116.7
Q ss_pred cEEEEEEcc-CCCEE-EEEeCCCeEEEEEeecCCeeEEEEEee-cCCCCeEEEEe-------CCCCCEEEEeeCCC----
Q 009569 274 EVWFLQFSH-DGKYL-ASSSKDQSAIIWEVKEDGQVSLKHRLS-GHRKPVFTVSW-------SPNDHQLLTCGQEE---- 339 (532)
Q Consensus 274 ~V~~v~~s~-~g~~l-as~s~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~l~~-------s~~~~~l~s~~~dg---- 339 (532)
....|+|+| ++..| ++....+.|++.|..++ .+..+.... ........++| ++++..|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTT-EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCC-EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 467899998 34444 44444466777787743 332222111 12235889999 99999777766554
Q ss_pred ---cEEEEECCC-CcEE-----EEeeccCCceEEEEEeeC-CCeEEEEeCCCcEEEEECC-------CCeE---------
Q 009569 340 ---AIRRWDVNS-GECL-----HVYEKTGVGLISCGWFLD-GGGIFAGMTDKSICLWDLD-------GREL--------- 393 (532)
Q Consensus 340 ---~i~iwd~~~-~~~~-----~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~-------~~~~--------- 393 (532)
.|.+.+... +... ..+... .....++.+|+ +.++++-..++.|..+|+. ++.+
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 266665443 2221 222211 23456788995 4445555677889999987 4432
Q ss_pred ---EE-eecCccCceEEEEEeeCCCEEEEE-ECCCeEEEEECCC--Cc----eeeeec---C------------Ccee-E
Q 009569 394 ---ES-WKGQKTLRISDMAITDDGKRIISI-CREAAILLLDREA--NF----ERWIEE---E------------EVIT-S 446 (532)
Q Consensus 394 ---~~-~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~I~iwd~~~--~~----~~~~~~---~------------~~i~-~ 446 (532)
.. ...........++|+|+|+.|+.+ +..+.|+.+|... .. ..+.+. . .... .
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 11 122222356899999999965555 4677899866543 21 122221 0 1233 4
Q ss_pred EEEc-------CCCCEEEEEecCCeEEEEecCCCCcceeEEec
Q 009569 447 FSLS-------KDNKYLLVNLINQEIHLWSIESDPKLVSRYKG 482 (532)
Q Consensus 447 ~~~s-------p~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 482 (532)
++.. +++.++++-..+..|+.++ .++ .+.++.+
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G--~v~TiaG 417 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG--IVSTYAG 417 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC--BEEEEEE
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEe-CCC--CEEEEec
Confidence 5554 4566666666677888888 343 4555544
No 280
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.17 E-value=0.00033 Score=76.29 Aligned_cols=236 Identities=8% Similarity=-0.010 Sum_probs=144.8
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEE-EeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCc
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKH-RLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGE 350 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~-~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 350 (532)
...|.++...++|.+ ..|+.++-|..|+..++ .+.... ........|.++...+++.+.+ |+.++-|..+|..+++
T Consensus 362 ~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKL-WIGTDGGGINVFENGKR-VAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKK 438 (781)
T ss_dssp SSCEEEEEECTTSCE-EEEEBSSCEEEEETTEE-EEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCE
T ss_pred CcceEEEEEcCCCCE-EEEeCCCcEEEEECCCC-eEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCc
Confidence 356999999888874 45565566888887532 111110 0022346789998887776554 6666778999988776
Q ss_pred EEEEee--ccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCc-----cCceEEEEEeeCCCEEEEEECCC
Q 009569 351 CLHVYE--KTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQK-----TLRISDMAITDDGKRIISICREA 423 (532)
Q Consensus 351 ~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg 423 (532)
...... .....|.++...+++. +.+|+. +-+..||..++......... ...|.++...++|.+.+ ++.++
T Consensus 439 ~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~ 515 (781)
T 3v9f_A 439 FQIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGG 515 (781)
T ss_dssp EEECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSS
T ss_pred EEEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCC
Confidence 433221 1345688888776665 555665 56889998875554443222 34799999998887554 45544
Q ss_pred eEEEEECCCCceeeee-----cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccc----cceEEEEEcc
Q 009569 424 AILLLDREANFERWIE-----EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHK----RARFVIRSCF 494 (532)
Q Consensus 424 ~I~iwd~~~~~~~~~~-----~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~i~~~~ 494 (532)
-+..||..+....... ....|.++...++|.+.++ +.+|-|..||..+. ....+.... ..+. .+..
T Consensus 516 Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~~--~~~~~~~~~gl~~~~i~--~i~~ 590 (781)
T 3v9f_A 516 GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSARNF--DYQVFQRKEGLPNTHIR--AISE 590 (781)
T ss_dssp CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEE-ETTEEEEESCTTTC--CCEEECGGGTCSCCCCC--EEEE
T ss_pred CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEE-ECCCceEEECCCCC--cEEEccccCCCCCceEE--EEEE
Confidence 5788998776622221 2346889999988875554 44665488888765 334443221 1222 2333
Q ss_pred CCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 495 GGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 495 ~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
.++|.+.+ ++.+| |..|+..+...
T Consensus 591 -d~~g~lW~-~t~~G-l~~~~~~~~~~ 614 (781)
T 3v9f_A 591 -DKNGNIWA-STNTG-ISCYITSKKCF 614 (781)
T ss_dssp -CSSSCEEE-ECSSC-EEEEETTTTEE
T ss_pred -CCCCCEEE-EcCCc-eEEEECCCCce
Confidence 66776555 44555 77778776543
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.17 E-value=0.0015 Score=70.60 Aligned_cols=224 Identities=7% Similarity=-0.084 Sum_probs=136.0
Q ss_pred CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEe-eCCCcEEEEECCCC----cEEEEeeccCCceEEEEE
Q 009569 293 DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTC-GQEEAIRRWDVNSG----ECLHVYEKTGVGLISCGW 367 (532)
Q Consensus 293 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~iwd~~~~----~~~~~~~~~~~~i~~~~~ 367 (532)
...|+..++.... . ..+......+..++|.+.+..|+.+ ...+.|+.+++... .....+.........+++
T Consensus 403 ~~~Ir~i~l~~~~-~---~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 403 RHEVRKMTLDRSE-Y---TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp BSSEEEECTTSCC-C---EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred ccceeEeeccCCc-c---eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 3456666665332 1 1222334567899999865555544 44678999998653 223333334455678899
Q ss_pred eeCCCeEEE-EeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC--CCeEEEEECCCCce-eeee-cCC
Q 009569 368 FLDGGGIFA-GMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR--EAAILLLDREANFE-RWIE-EEE 442 (532)
Q Consensus 368 ~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~I~iwd~~~~~~-~~~~-~~~ 442 (532)
.+.+..|+. -...+.|.+.++++.....+..........|+++|.+..|+.+.. .+.|...++..... .+.. .-.
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~ 558 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 558 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCS
T ss_pred eecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCC
Confidence 887655554 456789999999987666655444446899999998666666653 27899999887663 3332 235
Q ss_pred ceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 443 VITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 443 ~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
....|++++.+..|+.+. ..+.|..+++... .....+.........+.+.. . .+.+.++-...+.|...+..++..
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~-~~~~v~~~~~~l~~P~glav-~-~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAV-F-EDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEE-E-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred CceEEEEecCCCeEEEEeCCCCcEEEEecCCC-ceEEEecCCCccCCCCEEEE-e-CCEEEEEECCCCEEEEEeCCCCcc
Confidence 688999998777776664 4567999998654 33223332111111122322 1 234445555667888888777654
Q ss_pred ee
Q 009569 522 KK 523 (532)
Q Consensus 522 ~~ 523 (532)
..
T Consensus 636 ~~ 637 (791)
T 3m0c_C 636 VN 637 (791)
T ss_dssp CE
T ss_pred eE
Confidence 33
No 282
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.15 E-value=0.0029 Score=68.30 Aligned_cols=201 Identities=11% Similarity=-0.005 Sum_probs=126.9
Q ss_pred cccEEEEEEccCC-CEEEEEeCCCeEEEEEeecCCee-EEEEEeecCCCCeEEEEeCCCCCEEEEe-eCCCcEEEEECCC
Q 009569 272 SDEVWFLQFSHDG-KYLASSSKDQSAIIWEVKEDGQV-SLKHRLSGHRKPVFTVSWSPNDHQLLTC-GQEEAIRRWDVNS 348 (532)
Q Consensus 272 ~~~V~~v~~s~~g-~~las~s~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~iwd~~~ 348 (532)
...+..++|.+.. .++++-...+.|+.+++...... .....+.........|++.+.+..|+.+ ...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 4557789999854 44455556678888888632110 1112223233455678888776555544 4568999999876
Q ss_pred CcEEEEeeccCCceEEEEEeeCCCeEEEEeC--CCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCCeE
Q 009569 349 GECLHVYEKTGVGLISCGWFLDGGGIFAGMT--DKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-REAAI 425 (532)
Q Consensus 349 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I 425 (532)
......+.........|++.|.+..|+.+.. .+.|...++++.....+..........|++++.+..|+.+. ..+.|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 5544444444456889999997666666543 36899999998776666554444789999998777777665 55789
Q ss_pred EEEECCCCc-eeeeec---CCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 426 LLLDREANF-ERWIEE---EEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 426 ~iwd~~~~~-~~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
..+|+.... ..+... -....+|++.. +.++++-...+.|...|..++
T Consensus 583 ~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 583 SSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp EEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred EEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCC
Confidence 999997765 333322 12345666642 234444445678888886665
No 283
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.15 E-value=0.00016 Score=75.54 Aligned_cols=160 Identities=9% Similarity=0.019 Sum_probs=102.4
Q ss_pred EEeCCCCCEEEEeeCC----------------CcEEEEECCCCcEEEEeeccC---------CceEEEEEeeCCC---eE
Q 009569 323 VSWSPNDHQLLTCGQE----------------EAIRRWDVNSGECLHVYEKTG---------VGLISCGWFLDGG---GI 374 (532)
Q Consensus 323 l~~s~~~~~l~s~~~d----------------g~i~iwd~~~~~~~~~~~~~~---------~~i~~~~~~~~~~---~l 374 (532)
+++.++...++.+..+ +.|..+|.++|+.+..++... ....-+....+|+ .+
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLL 319 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEE
Confidence 4555655566655432 369999999999988776321 1111122234674 57
Q ss_pred EEEeCCCcEEEEECCCCeEEEeec-Cc------------cCce--------------------------EEEEEeeCCCE
Q 009569 375 FAGMTDKSICLWDLDGRELESWKG-QK------------TLRI--------------------------SDMAITDDGKR 415 (532)
Q Consensus 375 ~~~~~dg~i~iwd~~~~~~~~~~~-~~------------~~~v--------------------------~~~~~s~~~~~ 415 (532)
+.++.+|.++++|.+++++.-... .. ..++ ..++++|+..+
T Consensus 320 ~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~ 399 (571)
T 2ad6_A 320 SHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRT 399 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTE
T ss_pred EEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCE
Confidence 778899999999998765533221 11 0011 24678888777
Q ss_pred EEEEE-------------------------------------CCCeEEEEECCCCcee-eeecCCceeEEEEcCCCCEEE
Q 009569 416 IISIC-------------------------------------REAAILLLDREANFER-WIEEEEVITSFSLSKDNKYLL 457 (532)
Q Consensus 416 l~~~~-------------------------------------~dg~I~iwd~~~~~~~-~~~~~~~i~~~~~sp~~~~l~ 457 (532)
+++.+ .++.|..||..+++.. .......+.+..+...+..++
T Consensus 400 ~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~ 479 (571)
T 2ad6_A 400 LYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVW 479 (571)
T ss_dssp EEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEE
T ss_pred EEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEE
Confidence 77654 3478999999988732 223333333333333566788
Q ss_pred EEecCCeEEEEecCCCCcceeEEecc
Q 009569 458 VNLINQEIHLWSIESDPKLVSRYKGH 483 (532)
Q Consensus 458 ~~~~dg~i~iwd~~~~~~~~~~~~~~ 483 (532)
+++.||.|+.||.+++ +.+.++...
T Consensus 480 ~g~~dg~l~a~D~~tG-~~lw~~~~~ 504 (571)
T 2ad6_A 480 YATLDGYLKALDNKDG-KELWNFKMP 504 (571)
T ss_dssp EECTTSEEEEEETTTC-CEEEEEECS
T ss_pred EEcCCCeEEEEECCCC-CEEEEEeCC
Confidence 8999999999999998 788777644
No 284
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.15 E-value=5.1e-05 Score=80.94 Aligned_cols=228 Identities=8% Similarity=0.011 Sum_probs=127.4
Q ss_pred EEEEEEccCCCEEEEEeC-CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee-CC-----CcEEEEECC
Q 009569 275 VWFLQFSHDGKYLASSSK-DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG-QE-----EAIRRWDVN 347 (532)
Q Consensus 275 V~~v~~s~~g~~las~s~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~d-----g~i~iwd~~ 347 (532)
..++++.++|++++.|+. +..+.+||..++ .+.....+.... .-.+++..++++.++.|+ .+ ..+.+||..
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~-~W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSD-SWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGT-EEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCC-ceeECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 345778899999999884 568999998864 333322222111 123455667899999988 34 479999998
Q ss_pred CCcEEEEe-----eccCCceEEEEEeeCCCeEEEEeCC---------CcEEEEECCCCeEEEeecCcc---------Cce
Q 009569 348 SGECLHVY-----EKTGVGLISCGWFLDGGGIFAGMTD---------KSICLWDLDGRELESWKGQKT---------LRI 404 (532)
Q Consensus 348 ~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~---------~~v 404 (532)
+.+....- ...... ....+..++..++.|+.+ ..+..||..+........... ..-
T Consensus 323 t~~W~~~~~~~~~p~~~~~-~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~ 401 (656)
T 1k3i_A 323 SKTWTSLPNAKVNPMLTAD-KQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCG 401 (656)
T ss_dssp TTEEEEETTSCSGGGCCCC-TTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTC
T ss_pred CCcceeCCCcccccccccc-ccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCC
Confidence 87654320 000000 001122345555555444 356788887644222111111 122
Q ss_pred EEEEEee-CCCEEEEEECCC-----------eEEEEECCCCc-eeee----ecCCceeEEEEcCCCCEEEEEecC-----
Q 009569 405 SDMAITD-DGKRIISICREA-----------AILLLDREANF-ERWI----EEEEVITSFSLSKDNKYLLVNLIN----- 462 (532)
Q Consensus 405 ~~~~~s~-~~~~l~~~~~dg-----------~I~iwd~~~~~-~~~~----~~~~~i~~~~~sp~~~~l~~~~~d----- 462 (532)
.++.|.. +++++++|+.++ .|.+||..+.. .... .....-.+++..|+++++++|+.+
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~ 481 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF 481 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCc
Confidence 3444443 677777777532 68888888766 2221 112223456677899999999864
Q ss_pred ------CeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeC
Q 009569 463 ------QEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSE 507 (532)
Q Consensus 463 ------g~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~ 507 (532)
..+.+||..+. +- ..+.....+.....++...+++++++.|+.
T Consensus 482 ~~~~~~~~v~~ydp~t~-~W-~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 482 EDSTPVFTPEIYVPEQD-TF-YKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCSBCCCCEEEEGGGT-EE-EECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCcccceEEEcCCCC-ce-eecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 46899998765 21 111111111000111222589999999885
No 285
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.13 E-value=0.0027 Score=60.24 Aligned_cols=196 Identities=10% Similarity=0.097 Sum_probs=127.6
Q ss_pred cEEEEEEccCCCEEEEEe-CCCeEEEEEeecCCeeEEEEEeec----CCC--CeEEEEe---CCCCCEEEEee-------
Q 009569 274 EVWFLQFSHDGKYLASSS-KDQSAIIWEVKEDGQVSLKHRLSG----HRK--PVFTVSW---SPNDHQLLTCG------- 336 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s-~dg~i~iwd~~~~~~~~~~~~~~~----h~~--~v~~l~~---s~~~~~l~s~~------- 336 (532)
.--+++|.+....|..++ ..++|..|+...+. .... .+.+ ... .+..+.| .|++.++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~-~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS-HFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCC-EEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCe-EEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 344788988555555454 79999999987442 2222 3332 111 3579999 68877777543
Q ss_pred ------CCCcEEEEECC---CCcEEEEeec-------------cCCceEEEEEeeCCCeEEEEeCC-CcEEEEECCCCeE
Q 009569 337 ------QEEAIRRWDVN---SGECLHVYEK-------------TGVGLISCGWFLDGGGIFAGMTD-KSICLWDLDGREL 393 (532)
Q Consensus 337 ------~dg~i~iwd~~---~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~ 393 (532)
.+..|..||+. +++.+....- .......++..++|+..++++.. +.|..++.++...
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~ 171 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV 171 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE
Confidence 25779999998 7877655441 11347889999999999999988 8999999887655
Q ss_pred EEeecCc-----cCceEEEEEeeCCCEEEEEECCCeEEEEECCCCce-ee-e---e---cCCceeEE-EEcCCCCEEEEE
Q 009569 394 ESWKGQK-----TLRISDMAITDDGKRIISICREAAILLLDREANFE-RW-I---E---EEEVITSF-SLSKDNKYLLVN 459 (532)
Q Consensus 394 ~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~~-~~-~---~---~~~~i~~~-~~sp~~~~l~~~ 459 (532)
..+.... ....+.|+++|+|+.|++....+.+..+|+..... .+ . + .-.....+ ..-.+|+.++++
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~ 251 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVG 251 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEE
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEE
Confidence 5443211 12367999999999999888899999999885332 11 1 1 11223443 333477775555
Q ss_pred e-cCCeEEEEecC
Q 009569 460 L-INQEIHLWSIE 471 (532)
Q Consensus 460 ~-~dg~i~iwd~~ 471 (532)
. ..+.+.+.+..
T Consensus 252 ~~~~~~~~l~S~D 264 (334)
T 2p9w_A 252 ARAPYAISFRSWD 264 (334)
T ss_dssp EETTEEEEEECSS
T ss_pred cCCCCEEEEECCC
Confidence 4 45555555543
No 286
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.08 E-value=0.0032 Score=60.60 Aligned_cols=231 Identities=10% Similarity=0.016 Sum_probs=125.1
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeec-CCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCc
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKE-DGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGE 350 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~-~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 350 (532)
...+.++.|.+ +..++. +.++.| |.... +..+........+...+..+.+.+++..++++ .++.|.. ..+.|+
T Consensus 79 ~~~~~~i~~~~-~~~~~~-g~~g~i--~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIV-GEPPIM--LHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGK 152 (327)
T ss_dssp CCEEEEEEEET-TEEEEE-EETTEE--EEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTS
T ss_pred CccEEEEEecC-CeEEEE-ECCCeE--EEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCC
Confidence 44688899976 444444 455644 33333 34443332221234557788877767665554 4554432 222343
Q ss_pred EE-EEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEE
Q 009569 351 CL-HVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLD 429 (532)
Q Consensus 351 ~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd 429 (532)
.- .........+..+.+.+++.+++++...+..+-+|-.+..-..........+..+++.+++..+ .++.+|.+++.+
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~ 231 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSD 231 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTEEEEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEE-EEeCCceEEEec
Confidence 22 2223345568899999988777666543333334432222222222233478899999988755 456788888775
Q ss_pred CCCCc--eeee-e---cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEec---cccceEEEEEccCCCCCc
Q 009569 430 REANF--ERWI-E---EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKG---HKRARFVIRSCFGGFEQA 500 (532)
Q Consensus 430 ~~~~~--~~~~-~---~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~i~~~~~s~d~~ 500 (532)
...+. .... . ....+.++.+.+++..++++. +|.| ++....+ +.-..+.. .....+. +.| .+++
T Consensus 232 ~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG-~tW~~~~~~~~~~~~~~~--v~~-~~~~- 304 (327)
T 2xbg_A 232 PDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGG-QTWQQDVDVKKVPSNFYK--ILF-FSPD- 304 (327)
T ss_dssp TTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTT-SSCEECGGGTTSSSCCCE--EEE-EETT-
T ss_pred CCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCC-cccEEcCccCCCCCCeEE--EEE-ECCC-
Confidence 33232 1111 1 223588999998888777665 6766 3443433 33333321 1223233 334 3344
Q ss_pred EEEEEeCCCcEEEEeC
Q 009569 501 FIASGSEDSQVNIFLS 516 (532)
Q Consensus 501 ~l~sgs~dg~i~iw~~ 516 (532)
.++.++.+|.|+-++-
T Consensus 305 ~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 305 QGFILGQKGILLRYVT 320 (327)
T ss_dssp EEEEECSTTEEEEECC
T ss_pred ceEEEcCCceEEEEcC
Confidence 4666778998877764
No 287
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.05 E-value=0.00041 Score=72.54 Aligned_cols=144 Identities=13% Similarity=0.086 Sum_probs=91.5
Q ss_pred CcEEEEECCCCcEEEEeec--cC--------CceEEEEEe-eCCC---eEEEEeCCCcEEEEECCCCeEEEeecCcc---
Q 009569 339 EAIRRWDVNSGECLHVYEK--TG--------VGLISCGWF-LDGG---GIFAGMTDKSICLWDLDGRELESWKGQKT--- 401 (532)
Q Consensus 339 g~i~iwd~~~~~~~~~~~~--~~--------~~i~~~~~~-~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--- 401 (532)
+.|..+|..+|+.+..++. |. .++. +... .+|+ .++.++.+|.++++|.+++++.-......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 5899999999999988764 21 1111 1221 3664 67889999999999998765532211110
Q ss_pred ----------Cc--------------------------------eEEEEEeeCCCEEEEEE-------------------
Q 009569 402 ----------LR--------------------------------ISDMAITDDGKRIISIC------------------- 420 (532)
Q Consensus 402 ----------~~--------------------------------v~~~~~s~~~~~l~~~~------------------- 420 (532)
.+ -..++++|+...+++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 01356677655555432
Q ss_pred --------------CCCeEEEEECCCCceee-eecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccc
Q 009569 421 --------------REAAILLLDREANFERW-IEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHK 484 (532)
Q Consensus 421 --------------~dg~I~iwd~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 484 (532)
.+|.|.-||+.+++... .....++..-.+...+.++++++.||.++.||.+++ +.+.+++...
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG-~~lW~~~~~~ 527 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSG-KELWKFQTGS 527 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTC-CEEEEEECSS
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCC-CEEEEecCCC
Confidence 25789999999988322 222233322222234678888999999999999998 8888877543
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.05 E-value=0.0013 Score=62.42 Aligned_cols=157 Identities=8% Similarity=0.056 Sum_probs=108.2
Q ss_pred CCCeEEEEeCCCCCEEEEee-CCCcEEEEECCCCcEEEE-eec----c--CCceEEEEE---eeCCCeEEEEe-------
Q 009569 317 RKPVFTVSWSPNDHQLLTCG-QEEAIRRWDVNSGECLHV-YEK----T--GVGLISCGW---FLDGGGIFAGM------- 378 (532)
Q Consensus 317 ~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~-~~~----~--~~~i~~~~~---~~~~~~l~~~~------- 378 (532)
.---.+++|.+....++.++ ..++|..||...+..... +.. . ...+..+.| .|+++++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 33445789987555555555 789999999976654333 221 1 114578999 58877776543
Q ss_pred ------CCCcEEEEECC---CCeEE-Eee--c---C-------ccCceEEEEEeeCCCEEEEEECC-CeEEEEECCCCc-
Q 009569 379 ------TDKSICLWDLD---GRELE-SWK--G---Q-------KTLRISDMAITDDGKRIISICRE-AAILLLDREANF- 434 (532)
Q Consensus 379 ------~dg~i~iwd~~---~~~~~-~~~--~---~-------~~~~v~~~~~s~~~~~l~~~~~d-g~I~iwd~~~~~- 434 (532)
.+..+..||+. +++.. ... . . ......+++..++|+..++++.. +.|..++.....
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~ 171 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV 171 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE
Confidence 26779999998 44332 221 1 0 11258899999999999999988 898888887654
Q ss_pred eeeeec------CCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 435 ERWIEE------EEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 435 ~~~~~~------~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
..+... ....+.|+++|+|+.|++....|.+..+|+...
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 222111 123679999999999999877999999998854
No 289
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.04 E-value=0.0058 Score=58.77 Aligned_cols=236 Identities=6% Similarity=0.015 Sum_probs=124.1
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEE-eecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCc
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHR-LSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGE 350 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 350 (532)
...+.++.|.+++..+++| .+|.| ++....+..+..... .......+.++.|.+ +. ++.++..+.|.. ..+.|+
T Consensus 35 ~~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCC
Confidence 3478999998888877754 56654 233333334433221 112345688999976 44 444455665543 333343
Q ss_pred EEEEee---ccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEE
Q 009569 351 CLHVYE---KTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILL 427 (532)
Q Consensus 351 ~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~i 427 (532)
.-.... .....+..+.+.+++..++++ .++.|+.-+=.+..-..........+..+++.+++.+++++. ++.++.
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~ 187 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYS 187 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEE
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEE
Confidence 222222 123456778877777655554 456553321122222233333334788999999988776654 444444
Q ss_pred -EEC--CCCceeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEecc--ccceEEEEEccCCCCCcEE
Q 009569 428 -LDR--EANFERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGH--KRARFVIRSCFGGFEQAFI 502 (532)
Q Consensus 428 -wd~--~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~i~~~~~s~d~~~l 502 (532)
.|- .+...........+..+.++++++.++++ .+|.+++.+...+ +.-..+... ........+.+ .+++.++
T Consensus 188 S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G-~tW~~~~~~~~~~~~~~~~v~~-~~~~~~~ 264 (327)
T 2xbg_A 188 TWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNS-ENWGELLSPLRRNSVGFLDLAY-RTPNEVW 264 (327)
T ss_dssp EECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEE-EEECCCBCTTSSCCSCEEEEEE-SSSSCEE
T ss_pred EeCCCCCceeECCCCCCCccceeEECCCCCEEEEe-CCceEEEecCCCC-CeeEeccCCcccCCcceEEEEe-cCCCEEE
Confidence 442 22222223345678899999998766554 5788777642222 221112111 01111233445 5667666
Q ss_pred EEEeCCCcEEEEeCCCC
Q 009569 503 ASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 503 ~sgs~dg~i~iw~~~~~ 519 (532)
+++ .+|.| .+..+.+
T Consensus 265 ~~g-~~g~i-~~S~DgG 279 (327)
T 2xbg_A 265 LAG-GAGAL-LCSQDGG 279 (327)
T ss_dssp EEE-STTCE-EEESSTT
T ss_pred EEe-CCCeE-EEeCCCC
Confidence 654 57767 3444444
No 290
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.03 E-value=0.00043 Score=69.59 Aligned_cols=151 Identities=9% Similarity=0.098 Sum_probs=100.6
Q ss_pred CeEEEEeCC-CCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeC-CC----cEEEEECCCCe
Q 009569 319 PVFTVSWSP-NDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMT-DK----SICLWDLDGRE 392 (532)
Q Consensus 319 ~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg----~i~iwd~~~~~ 392 (532)
....++|+| ++..|+.+...+.|+.+|..++...... ........++|+++++.++++.. ++ .+..++..+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 346889998 4566666666688999999876644433 35566889999999996666654 22 34445543321
Q ss_pred E--EEeecCccCceEEEEEee-CCCEEEEEECCCeEEEEECCCCce-eeee--cCCceeEEEEcCCCCEEEEE-ecCCeE
Q 009569 393 L--ESWKGQKTLRISDMAITD-DGKRIISICREAAILLLDREANFE-RWIE--EEEVITSFSLSKDNKYLLVN-LINQEI 465 (532)
Q Consensus 393 ~--~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~I~iwd~~~~~~-~~~~--~~~~i~~~~~sp~~~~l~~~-~~dg~i 465 (532)
. ..... ......++++| ++.++++-..++.|..+|..+... .+.. .......++|+|++++|+++ ...+.|
T Consensus 217 ~~~~~l~~--~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 217 KVITELTK--GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp CSEEEEEE--CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeecc--CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 1 12211 22567889999 676666666788999999987663 2222 22357789999999965555 456789
Q ss_pred EEEecCC
Q 009569 466 HLWSIES 472 (532)
Q Consensus 466 ~iwd~~~ 472 (532)
..++...
T Consensus 295 ~~~~~d~ 301 (430)
T 3tc9_A 295 LRSDYDW 301 (430)
T ss_dssp EEEEEET
T ss_pred EEEeCCc
Confidence 9988753
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.98 E-value=0.0029 Score=60.56 Aligned_cols=185 Identities=16% Similarity=0.243 Sum_probs=120.9
Q ss_pred CCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeC----CC---eEEEEeC---CCcEEEEEC--CCCeEEEe
Q 009569 329 DHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLD----GG---GIFAGMT---DKSICLWDL--DGRELESW 396 (532)
Q Consensus 329 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~----~~---~l~~~~~---dg~i~iwd~--~~~~~~~~ 396 (532)
...++.....+-+.+||+ +|+.++.+.. +.+..+..-|+ |+ ++++... +++|.+|++ .++++...
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 356777777889999999 8988888753 55677776663 22 2333333 578999976 45555555
Q ss_pred ec------CccCceEEEEE--eeC-CC-EEEEEECCCeEEEEECCC---Cc-----eeeeecCCceeEEEEcCCCCEEEE
Q 009569 397 KG------QKTLRISDMAI--TDD-GK-RIISICREAAILLLDREA---NF-----ERWIEEEEVITSFSLSKDNKYLLV 458 (532)
Q Consensus 397 ~~------~~~~~v~~~~~--s~~-~~-~l~~~~~dg~I~iwd~~~---~~-----~~~~~~~~~i~~~~~sp~~~~l~~ 458 (532)
.. .....+..+++ +|. +. ++++...+|.+..|++.. +. ...+.....+..+...+....|++
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYI 196 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEE
Confidence 22 11136777888 664 44 677788899999998843 21 344455678899999999999999
Q ss_pred EecCCeEEEEecCCC----CcceeEEe-cc-ccceEEEEEccCCCCCc-EEEEEe-CCCcEEEEeCC
Q 009569 459 NLINQEIHLWSIESD----PKLVSRYK-GH-KRARFVIRSCFGGFEQA-FIASGS-EDSQVNIFLSF 517 (532)
Q Consensus 459 ~~~dg~i~iwd~~~~----~~~~~~~~-~~-~~~~~~i~~~~~s~d~~-~l~sgs-~dg~i~iw~~~ 517 (532)
+-++..|..++.... .+.+..+. ++ ...+..+.+.. .++++ +|++++ .++...+|+..
T Consensus 197 ~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~-~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 197 AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYY-AADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEE-CGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEe-cCCCCEEEEEEcCCCCEEEEEECC
Confidence 999877777775411 13444442 22 12344454433 45555 555555 67899999997
No 292
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.98 E-value=0.0044 Score=60.30 Aligned_cols=224 Identities=13% Similarity=0.076 Sum_probs=119.1
Q ss_pred ccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEee---cCCCCeEEEEeCCC---CCEEEEeeC-C-----Cc
Q 009569 273 DEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS---GHRKPVFTVSWSPN---DHQLLTCGQ-E-----EA 340 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~~l~~s~~---~~~l~s~~~-d-----g~ 340 (532)
...+.++|.|+|+++++ ..+|.|.+++ + +....+..+. ........++|+|+ +..|+.+.. . ..
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--E-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--T-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--C-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 45679999999996555 5569999888 2 3333333222 22356789999998 555554443 2 57
Q ss_pred EEEEECCCCcE-----E-EEee---ccCCceEEEEEeeCCCeEEEEeC-------------CCcEEEEECCCC-------
Q 009569 341 IRRWDVNSGEC-----L-HVYE---KTGVGLISCGWFLDGGGIFAGMT-------------DKSICLWDLDGR------- 391 (532)
Q Consensus 341 i~iwd~~~~~~-----~-~~~~---~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~------- 391 (532)
|..|+...+.. + ..+. ........++|.|+|.++++.+. .|.|.-++.++.
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 88888764421 1 1122 11123468999999976665332 256666666541
Q ss_pred ------eEEEeecCccCceEEEEEee-CCCEEEEEECCCe--------EEEEECCCC---------------c--eeeee
Q 009569 392 ------ELESWKGQKTLRISDMAITD-DGKRIISICREAA--------ILLLDREAN---------------F--ERWIE 439 (532)
Q Consensus 392 ------~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~--------I~iwd~~~~---------------~--~~~~~ 439 (532)
....+..... ....++|+| ++.++++-..... |.+...... . .....
T Consensus 187 ~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 187 LGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred cCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 1111111121 467889999 6665555433332 433322110 0 00011
Q ss_pred cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcc-----eeEEeccccceEEEEEccCCCCCcEEEEE
Q 009569 440 EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKL-----VSRYKGHKRARFVIRSCFGGFEQAFIASG 505 (532)
Q Consensus 440 ~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~i~~~~~s~d~~~l~sg 505 (532)
+......++| .+|.++++....+.|...++...... ...+..... ....+++ .|||.+.++.
T Consensus 266 ~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~--rp~~v~~-~pdG~lyv~~ 332 (352)
T 2ism_A 266 QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFG--RLREVQV-GPDGALYVTT 332 (352)
T ss_dssp TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSC--CEEEEEE-CTTSCEEEEE
T ss_pred CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCC--CeeEEEE-CCCCcEEEEE
Confidence 2234567777 46666666666677887777644211 112211111 1344555 7787665554
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.96 E-value=0.012 Score=61.93 Aligned_cols=231 Identities=10% Similarity=-0.022 Sum_probs=145.9
Q ss_pred EEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee-CCCcEEEEECCCCcEEEEeeccCCceEE
Q 009569 286 YLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG-QEEAIRRWDVNSGECLHVYEKTGVGLIS 364 (532)
Q Consensus 286 ~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 364 (532)
+|+.+ ....|+..++.+... .....+. .-..+..++|++.+..|+.+. .++.|..+++........+.........
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~-~~~~~~~-~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~G 84 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNN-NVAIPLT-GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEG 84 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTC-EEECCCC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred EEEEE-eCCcEEEEECCCCCc-ceEEEcC-CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcce
Confidence 44444 456788888875422 2222222 234578999999766666554 5688999998765444444333345678
Q ss_pred EEEeeCCCeEE-EEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC--CCeEEEEECCCCc-eeeeec
Q 009569 365 CGWFLDGGGIF-AGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR--EAAILLLDREANF-ERWIEE 440 (532)
Q Consensus 365 ~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~I~iwd~~~~~-~~~~~~ 440 (532)
+++.+.+..|+ +-...+.|.+.++++................++++|....|+.+.. .+.|...++.... ..+...
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~ 164 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPN 164 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECC
Confidence 88887655554 4445678999999875544443333346899999996666666553 5788888887765 444444
Q ss_pred CCceeEEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCC
Q 009569 441 EEVITSFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSP 519 (532)
Q Consensus 441 ~~~i~~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~ 519 (532)
-.....++++++++.|+.+. ..+.|..+|+... .. ..+......... +++ . .+.+.++-...+.|...|..++
T Consensus 165 ~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~-~~-~v~~~~l~~P~g--lav-~-~~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 165 VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL-NR-EVIADDLPHPFG--LTQ-Y-QDYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SC-EEEEECCSCEEE--EEE-E-TTEEEEEETTTTEEEEEETTTC
T ss_pred CCCcceEEEccccCEEEEEECCCCEEEEEcCCCC-ce-EEeeccCCCceE--EEE-E-CCEEEEecCCCCEEEEEECCCC
Confidence 56788999999877666664 4678999998765 22 333322222223 333 2 2455555556788999998777
Q ss_pred Cceeee
Q 009569 520 FAKKIK 525 (532)
Q Consensus 520 ~~~~~~ 525 (532)
....+.
T Consensus 239 ~~~~~l 244 (628)
T 4a0p_A 239 QNRTII 244 (628)
T ss_dssp CSCEEE
T ss_pred CceEEE
Confidence 654443
No 294
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.95 E-value=0.0011 Score=62.87 Aligned_cols=234 Identities=12% Similarity=0.089 Sum_probs=122.3
Q ss_pred CCCEEEEEe-CC-----CeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC-----CcEEEEECCCCc-
Q 009569 283 DGKYLASSS-KD-----QSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE-----EAIRRWDVNSGE- 350 (532)
Q Consensus 283 ~g~~las~s-~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~- 350 (532)
++.+++.|+ .+ ..+.+||..+. .+..+..+.........+.. ++..++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQ-EWSFLPSITRKRRYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTT-EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCC-eEEeCCCCChhhccccEEEE--CCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 445566665 32 36788887754 33332222221122222222 56777777765 469999998776
Q ss_pred --EEEEeeccCCceEEEEEeeCCCeEEEEeCC-----CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECC-
Q 009569 351 --CLHVYEKTGVGLISCGWFLDGGGIFAGMTD-----KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICRE- 422 (532)
Q Consensus 351 --~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d- 422 (532)
....-..........+...+++.++.|+.+ ..+.+||+.+..-..............+..-+++.++.|+.+
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 170 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDG 170 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCS
T ss_pred CeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCC
Confidence 333211111111111122267777777643 368899998765544332222122222222367777777654
Q ss_pred ----CeEEEEECCCCc-eeeeecCCc--eeEEEEcCCCCEEEEEecC-----CeEEEEecCCCCcceeEEeccccceEEE
Q 009569 423 ----AAILLLDREANF-ERWIEEEEV--ITSFSLSKDNKYLLVNLIN-----QEIHLWSIESDPKLVSRYKGHKRARFVI 490 (532)
Q Consensus 423 ----g~I~iwd~~~~~-~~~~~~~~~--i~~~~~sp~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~i 490 (532)
..+.+||+.+.. ........+ -.++.. -++++++.|+.+ ..+.+||+.+. +- ..+.....+....
T Consensus 171 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~-~W-~~~~~~p~~r~~~ 247 (301)
T 2vpj_A 171 LNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTD-SW-TTVTSMTTPRCYV 247 (301)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTT-EE-EEECCCSSCCBSC
T ss_pred CcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCC-cE-EECCCCCCcccce
Confidence 468999998877 222111111 112222 256777777764 46899998775 22 2222111111111
Q ss_pred EEccCCCCCcEEEEEeCC-----CcEEEEeCCCCCceee
Q 009569 491 RSCFGGFEQAFIASGSED-----SQVNIFLSFSPFAKKI 524 (532)
Q Consensus 491 ~~~~~s~d~~~l~sgs~d-----g~i~iw~~~~~~~~~~ 524 (532)
.++ ..++++++.|+.+ ..|.+||+.+.....+
T Consensus 248 ~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 248 GAT--VLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp EEE--EETTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred eEE--EECCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 111 2256777777765 4688999998766554
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.91 E-value=4e-05 Score=82.06 Aligned_cols=221 Identities=5% Similarity=-0.100 Sum_probs=128.0
Q ss_pred CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee-CCCcEEEEECCC----CcEEEEeeccCCceEEEEE
Q 009569 293 DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG-QEEAIRRWDVNS----GECLHVYEKTGVGLISCGW 367 (532)
Q Consensus 293 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~----~~~~~~~~~~~~~i~~~~~ 367 (532)
.+.|+..++.... ....+ .....+..++|.+.+..|+.+. ..+.|+.+++.+ ......+.........+++
T Consensus 385 ~~~I~~id~~~~~---~~~~~-~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glav 460 (699)
T 1n7d_A 385 RHEVRKMTLDRSE---YTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 460 (699)
T ss_dssp TTC-CEECTTSCC---EECCS-CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEEC
T ss_pred ccceEEEeCCCCc---ceeee-ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEE
Confidence 3567777766432 11222 2234466889998776666654 457899999875 2222222212223456777
Q ss_pred eeCC-CeEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC--CCeEEEEECCCCcee-ee-ecCC
Q 009569 368 FLDG-GGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR--EAAILLLDREANFER-WI-EEEE 442 (532)
Q Consensus 368 ~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~I~iwd~~~~~~~-~~-~~~~ 442 (532)
.+.+ +++++-...+.|.++++.+.....+..........++++|.+.+|+.+.. .+.|..+++...... +. ..-.
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~ 540 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 540 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCS
T ss_pred EeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCC
Confidence 7544 44444456788999999887666555433336788999997665555443 268888887655422 22 2234
Q ss_pred ceeEEEEcCCCCEEEEE-ecCCeEEEEecCCCCcceeEEecc---ccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 443 VITSFSLSKDNKYLLVN-LINQEIHLWSIESDPKLVSRYKGH---KRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 443 ~i~~~~~sp~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
....|+|+|++..|+.+ ...+.|..+++... ....+... ......+ .+ .. +.++++....+.|..++..+
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~--~~~~~~~~~~~~~~P~gl--av-d~-~~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDEKRLAHPFSL--AV-FE-DKVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSS--CCEEECCCSSSCSSCCCC--EE-ET-TEEEEECSTTTCEEEEETTT
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCC--ceEEEEecCCcCCCceEe--EE-EC-CEEEEEeCCCCeEEEEEccC
Confidence 56789999976555554 45678999998653 22222211 1111112 22 22 24555666678899999877
Q ss_pred CCcee
Q 009569 519 PFAKK 523 (532)
Q Consensus 519 ~~~~~ 523 (532)
+....
T Consensus 615 G~~~~ 619 (699)
T 1n7d_A 615 GSDVN 619 (699)
T ss_dssp EEEEE
T ss_pred CCceE
Confidence 65433
No 296
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.89 E-value=0.0015 Score=61.96 Aligned_cols=233 Identities=12% Similarity=0.041 Sum_probs=121.1
Q ss_pred CCEEEEEeCC----CeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC-----CcEEEEECCCCcEEEE
Q 009569 284 GKYLASSSKD----QSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE-----EAIRRWDVNSGECLHV 354 (532)
Q Consensus 284 g~~las~s~d----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~ 354 (532)
+.+++.|+.+ ..+.+||..+. .+..+..+......-..+.+ ++..++.|+.+ ..+.+||..+.+....
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEE-RWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTT-EEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCC-cEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 3455555543 35778887754 33333222221111222222 56777777754 3588999988764433
Q ss_pred eeccCCceEEEEEeeCCCeEEEEeCCC-----cEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC-------C
Q 009569 355 YEKTGVGLISCGWFLDGGGIFAGMTDK-----SICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR-------E 422 (532)
Q Consensus 355 ~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------d 422 (532)
-..........+...++..++.|+.++ .+.+||+.+..-..............+..-+++.++.|+. -
T Consensus 93 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEEC
T ss_pred CCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccc
Confidence 221111111111223677777777553 5788998876655443322211111122235666666653 2
Q ss_pred CeEEEEECCCCc-eeeeecC--CceeEEEEcCCCCEEEEEecC-----CeEEEEecCCCCcceeEEeccccceEEEEEcc
Q 009569 423 AAILLLDREANF-ERWIEEE--EVITSFSLSKDNKYLLVNLIN-----QEIHLWSIESDPKLVSRYKGHKRARFVIRSCF 494 (532)
Q Consensus 423 g~I~iwd~~~~~-~~~~~~~--~~i~~~~~sp~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~ 494 (532)
..+.+||+.+.. ....... ..-.+++. -++++++.|+.+ ..+.+||+.+. + -..+...........++
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~-~-W~~~~~~~~~r~~~~~~- 248 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTN-A-WRQVADMNMCRRNAGVC- 248 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTT-E-EEEECCCSSCCBSCEEE-
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCC-C-EeeCCCCCCccccCeEE-
Confidence 458999998876 2221111 11112222 257777787764 36899998765 2 12222111111111111
Q ss_pred CCCCCcEEEEEeCCC-----cEEEEeCCCCCceee
Q 009569 495 GGFEQAFIASGSEDS-----QVNIFLSFSPFAKKI 524 (532)
Q Consensus 495 ~s~d~~~l~sgs~dg-----~i~iw~~~~~~~~~~ 524 (532)
..++.+++.|+.++ .|.+||+.+.....+
T Consensus 249 -~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 282 (302)
T 2xn4_A 249 -AVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVV 282 (302)
T ss_dssp -EETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred -EECCEEEEECCcCCCcccccEEEEcCCCCeEEEC
Confidence 23567777787654 489999998776554
No 297
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.88 E-value=0.015 Score=56.51 Aligned_cols=228 Identities=11% Similarity=0.065 Sum_probs=123.4
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEee---cCCCCeEEEEeCCC---CCEEEEeeC----C---
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLS---GHRKPVFTVSWSPN---DHQLLTCGQ----E--- 338 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~~l~~s~~---~~~l~s~~~----d--- 338 (532)
-...+.++|.|+|+++++ ..+|.|++++. + +. ..+..+. ........++|+|+ +..|+.+.. +
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISP-S-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECS-S-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeC-C-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 345789999999985555 55699988863 2 33 3333322 22356889999997 445544433 3
Q ss_pred -CcEEEEECCCC--c---E--E-EEeec-cCCceEEEEEeeCCCeEEEEeC-------------CCcEEEEECCCC----
Q 009569 339 -EAIRRWDVNSG--E---C--L-HVYEK-TGVGLISCGWFLDGGGIFAGMT-------------DKSICLWDLDGR---- 391 (532)
Q Consensus 339 -g~i~iwd~~~~--~---~--~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~---- 391 (532)
..|..|+.... . . + ..+.. .......+.|.|||.++++.+. .|.|.-++.++.
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 56778877654 1 1 1 11221 1123467899999987666432 245666666543
Q ss_pred ----eEEEeecCccCceEEEEEee-CCCEEEEEECCC---eEEEEECCCC---------------c--eeee-ecCCcee
Q 009569 392 ----ELESWKGQKTLRISDMAITD-DGKRIISICREA---AILLLDREAN---------------F--ERWI-EEEEVIT 445 (532)
Q Consensus 392 ----~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg---~I~iwd~~~~---------------~--~~~~-~~~~~i~ 445 (532)
....+..... ....++|+| ++.++++-...+ .|.+...... . .... .......
T Consensus 184 npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 184 NPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp SSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 1111222222 467899999 566554432221 2444332110 0 0011 1233567
Q ss_pred EEEEc-------CCCCEEEEEecCCeEEEEecCCCCcce--eEEeccccceEEEEEccCCCCCcEEEEEe
Q 009569 446 SFSLS-------KDNKYLLVNLINQEIHLWSIESDPKLV--SRYKGHKRARFVIRSCFGGFEQAFIASGS 506 (532)
Q Consensus 446 ~~~~s-------p~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~i~~~~~s~d~~~l~sgs 506 (532)
.++|. .+|.++++....+.|...++....... ..+... .......+++ .|||.+.++..
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~-~~~rp~~v~~-~pDG~lyv~~~ 330 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKN-VFGRLRDVVI-DDDGGILISTS 330 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTT-TSCCEEEEEE-CTTSCEEEEEC
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccC-CCCCeeEEEE-CCCCcEEEEEe
Confidence 88883 567777776667788888887542222 122211 1112344556 78887665543
No 298
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.87 E-value=0.0026 Score=61.63 Aligned_cols=192 Identities=12% Similarity=0.062 Sum_probs=114.4
Q ss_pred EEEEEEccCCCEEEEEe------------CCCeEEEEEeecC-CeeEEEEEeec-----CCCCeEEEEeCC--CCC-EEE
Q 009569 275 VWFLQFSHDGKYLASSS------------KDQSAIIWEVKED-GQVSLKHRLSG-----HRKPVFTVSWSP--NDH-QLL 333 (532)
Q Consensus 275 V~~v~~s~~g~~las~s------------~dg~i~iwd~~~~-~~~~~~~~~~~-----h~~~v~~l~~s~--~~~-~l~ 333 (532)
.-.+...|+|..+++++ .+|.|.++|..+. .....+ .+.+ ..-....+.+.+ ++. +|+
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEE-EccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34566788886655542 6899999998732 222222 2222 223566677655 343 455
Q ss_pred EeeC---CCcEEEEECCCC-cE---EEEeecc-CCceEEEEEeeCCCeEEEEe-----------------CCCcEEEEEC
Q 009569 334 TCGQ---EEAIRRWDVNSG-EC---LHVYEKT-GVGLISCGWFLDGGGIFAGM-----------------TDKSICLWDL 388 (532)
Q Consensus 334 s~~~---dg~i~iwd~~~~-~~---~~~~~~~-~~~i~~~~~~~~~~~l~~~~-----------------~dg~i~iwd~ 388 (532)
.+.. +.+|.+|++..+ .. +..+.+. -...+.+.+.++|.+.++.. ..|.|+.+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 5432 457888777543 22 2233322 34578899999998777654 1245666665
Q ss_pred CCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCCeEEEEECCC-Cc---eeeeecCCceeEEEEcC-CCCEEEEEecC
Q 009569 389 DGRELESWKGQKTLRISDMAITDDGKRIISIC-REAAILLLDREA-NF---ERWIEEEEVITSFSLSK-DNKYLLVNLIN 462 (532)
Q Consensus 389 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~iwd~~~-~~---~~~~~~~~~i~~~~~sp-~~~~l~~~~~d 462 (532)
. .+......- ...+.++|+||++.++.+. ..+.|..|++.. +. ..........-.+++++ +|++.+++..+
T Consensus 211 ~--~~~~~~~~l-~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 211 N--DVRVVAEGF-DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp T--CCEEEEEEE-SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred C--eEEEeecCC-cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence 3 332222221 2678999999998877765 578999999863 22 22334456678899999 59877766533
Q ss_pred -CeEEEEec
Q 009569 463 -QEIHLWSI 470 (532)
Q Consensus 463 -g~i~iwd~ 470 (532)
+.|..|+.
T Consensus 288 g~~v~~~~P 296 (355)
T 3sre_A 288 GMRIFFYDA 296 (355)
T ss_dssp HHHHHSCCT
T ss_pred ceEEEEECC
Confidence 24444443
No 299
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.86 E-value=0.0028 Score=60.18 Aligned_cols=232 Identities=11% Similarity=0.024 Sum_probs=123.3
Q ss_pred CEEEEEeC--CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC----CcEEEEECCCCcEEEEeecc
Q 009569 285 KYLASSSK--DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE----EAIRRWDVNSGECLHVYEKT 358 (532)
Q Consensus 285 ~~las~s~--dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~ 358 (532)
.+++.|+. ...+.+||..++ .+..+..+.........+.+ ++..++.|+.+ ..+.+||..+.+....-...
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDY-SWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTT-EEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCC-CEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 34555654 356888888754 33333222222222223332 56677777755 57899999887654332211
Q ss_pred CCceEEEEEeeCCCeEEEEeCC------CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC---------CC
Q 009569 359 GVGLISCGWFLDGGGIFAGMTD------KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR---------EA 423 (532)
Q Consensus 359 ~~~i~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg 423 (532)
.......+..-+++.++.|+.+ ..+.+||..+..-..............+..-+++.++.|+. -.
T Consensus 90 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 90 TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECC
T ss_pred ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccc
Confidence 1111111122367777777765 46899999887655443322212222222236666666653 34
Q ss_pred eEEEEECCCCc-eeeeecCC--ceeEEEEcCCCCEEEEEecC-----CeEEEEecCCC-CcceeEEeccccceEEEEEcc
Q 009569 424 AILLLDREANF-ERWIEEEE--VITSFSLSKDNKYLLVNLIN-----QEIHLWSIESD-PKLVSRYKGHKRARFVIRSCF 494 (532)
Q Consensus 424 ~I~iwd~~~~~-~~~~~~~~--~i~~~~~sp~~~~l~~~~~d-----g~i~iwd~~~~-~~~~~~~~~~~~~~~~i~~~~ 494 (532)
.+.+||..+.. ........ .-.++... ++++++.|+.+ ..+.+||+.+. ...+..+...... ..++.
T Consensus 170 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~---~~~~~ 245 (306)
T 3ii7_A 170 SCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVT---VKCAA 245 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSC---CEEEE
T ss_pred eEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccc---eeEEE
Confidence 58999998887 22221111 11122222 56777777653 35889998775 1122111111111 11111
Q ss_pred CCCCCcEEEEEeCC-----CcEEEEeCCCCCceeee
Q 009569 495 GGFEQAFIASGSED-----SQVNIFLSFSPFAKKIK 525 (532)
Q Consensus 495 ~s~d~~~l~sgs~d-----g~i~iw~~~~~~~~~~~ 525 (532)
-++.+++.|+.+ ..+.+||+.+.....+.
T Consensus 246 --~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 246 --VGSIVYVLAGFQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp --ETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred --ECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence 256777888754 56899999988766543
No 300
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.83 E-value=0.003 Score=63.38 Aligned_cols=203 Identities=13% Similarity=0.106 Sum_probs=117.0
Q ss_pred eEEcccccccEEEEEEccCCCEEEEEeCC---Ce-EEEEEeecCCeeEEEEEeecCCCCeEEEEeCC-CCCEEEEeeCCC
Q 009569 265 LQILEAHSDEVWFLQFSHDGKYLASSSKD---QS-AIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSP-NDHQLLTCGQEE 339 (532)
Q Consensus 265 ~~~l~~h~~~V~~v~~s~~g~~las~s~d---g~-i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg 339 (532)
+..+-........++|+++|+++++.... .. +...+...+ +.....+. .-.....++++| ++.+.++-..++
T Consensus 174 v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~--~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~ 250 (433)
T 4hw6_A 174 VDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG--FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHA 250 (433)
T ss_dssp EEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT--TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCS
T ss_pred EEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC--eecccccc-ccCCCCEEEEeCCCCeEEEEECCCC
Confidence 33333344568899999999955544321 22 222332211 11011111 123345688899 666666656678
Q ss_pred cEEEEECCCCcEEEEe-ecc-CCceEEEEEeeCCCeEEEEe-CCCcEEEEECCC--CeE---EEeecC------------
Q 009569 340 AIRRWDVNSGECLHVY-EKT-GVGLISCGWFLDGGGIFAGM-TDKSICLWDLDG--REL---ESWKGQ------------ 399 (532)
Q Consensus 340 ~i~iwd~~~~~~~~~~-~~~-~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~--~~~---~~~~~~------------ 399 (532)
.|+.+|..++.....+ ... ......++|+|+++.|+++. ..+.|..++.+. +.+ ..+...
T Consensus 251 ~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~ 330 (433)
T 4hw6_A 251 MISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGT 330 (433)
T ss_dssp EEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGG
T ss_pred EEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCccc
Confidence 8999999877763322 211 22234699999999555554 567899988752 211 111111
Q ss_pred --ccCceEEEEE---------eeCCCEEEEEECCCeEEEEECCCCc-eeeeec------------------CCceeEEEE
Q 009569 400 --KTLRISDMAI---------TDDGKRIISICREAAILLLDREANF-ERWIEE------------------EEVITSFSL 449 (532)
Q Consensus 400 --~~~~v~~~~~---------s~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~------------------~~~i~~~~~ 449 (532)
.-.....+++ .++|.++++-...+.|+.++.. +. ..+.+. -.....+++
T Consensus 331 ~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giav 409 (433)
T 4hw6_A 331 GARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAY 409 (433)
T ss_dssp GSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEE
T ss_pred ceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEE
Confidence 1124677999 6777666666677889999863 33 222221 123678888
Q ss_pred c-CCCCEEEEEecCCeEEEEecC
Q 009569 450 S-KDNKYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 450 s-p~~~~l~~~~~dg~i~iwd~~ 471 (532)
+ +++.++++-..++.|+.++++
T Consensus 410 d~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 410 DMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp ETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ECCCCEEEEEeCCCCEEEEEecC
Confidence 8 566555555556778777753
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.83 E-value=0.0059 Score=58.40 Aligned_cols=190 Identities=14% Similarity=0.232 Sum_probs=119.8
Q ss_pred CCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCC----CC---EEEEeeC---CCcEEEEEC--CCCc
Q 009569 283 DGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPN----DH---QLLTCGQ---EEAIRRWDV--NSGE 350 (532)
Q Consensus 283 ~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~----~~---~l~s~~~---dg~i~iwd~--~~~~ 350 (532)
...+++.....+-+.+||+. +. .+..+.. +.++.+..-|+ |+ ++++... +++|.+|++ .++.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~-G~---~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD-GK---MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT-SC---EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC
T ss_pred CccEEEEEcCCCCEEEEcCC-Cc---EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc
Confidence 34456666677899999994 53 3344432 55666666552 22 2233333 578999977 3443
Q ss_pred EEEEeec------cC-CceEEEEE--eeC-CC-eEEEEeCCCcEEEEECC---C-----CeEEEeecCccCceEEEEEee
Q 009569 351 CLHVYEK------TG-VGLISCGW--FLD-GG-GIFAGMTDKSICLWDLD---G-----RELESWKGQKTLRISDMAITD 411 (532)
Q Consensus 351 ~~~~~~~------~~-~~i~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~---~-----~~~~~~~~~~~~~v~~~~~s~ 411 (532)
+..+.. .. ..+..+|+ +|. +. ++++...+|.+..|++. . ..+..+... +.+..+...+
T Consensus 113 -l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg--sq~EgcvvDd 189 (355)
T 3amr_A 113 -LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN--SQTEGMAADD 189 (355)
T ss_dssp -EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS--SCEEEEEEET
T ss_pred -eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC--CCcceEEEcC
Confidence 444421 11 45666777 564 43 57778888999999883 2 223333333 3788999999
Q ss_pred CCCEEEEEECCCeEEEEECCCC-----c-eeeeec---CCceeEEEE--cCCCC-EEEEEe-cCCeEEEEecCCCCccee
Q 009569 412 DGKRIISICREAAILLLDREAN-----F-ERWIEE---EEVITSFSL--SKDNK-YLLVNL-INQEIHLWSIESDPKLVS 478 (532)
Q Consensus 412 ~~~~l~~~~~dg~I~iwd~~~~-----~-~~~~~~---~~~i~~~~~--sp~~~-~l~~~~-~dg~i~iwd~~~~~~~~~ 478 (532)
....|+.+-.+..|..||.+.. . ...... ...+..|++ .++++ ||++++ .++++.+||.....+.+.
T Consensus 190 ~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg 269 (355)
T 3amr_A 190 EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVA 269 (355)
T ss_dssp TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEE
T ss_pred CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEE
Confidence 8899999999988888885522 2 112222 246788888 45555 676666 567999999973337777
Q ss_pred EEe
Q 009569 479 RYK 481 (532)
Q Consensus 479 ~~~ 481 (532)
.|.
T Consensus 270 ~f~ 272 (355)
T 3amr_A 270 DFR 272 (355)
T ss_dssp EEE
T ss_pred EEE
Confidence 774
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.82 E-value=0.019 Score=60.40 Aligned_cols=196 Identities=9% Similarity=-0.092 Sum_probs=126.4
Q ss_pred ccEEEEEEccCCCEE-EEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEe-eCCCcEEEEECCCCc
Q 009569 273 DEVWFLQFSHDGKYL-ASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTC-GQEEAIRRWDVNSGE 350 (532)
Q Consensus 273 ~~V~~v~~s~~g~~l-as~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~iwd~~~~~ 350 (532)
..+..++|++.+..| ++-..++.|..+++... .... .+.........+++.+.+..|+.+ ...+.|.+.++....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~-~~~~--v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGS-ALEH--VVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEE--EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCC-CcEE--EEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 457899999965555 45556788888887633 2222 122222345677887665555444 446789999987554
Q ss_pred EEEEeeccCCceEEEEEeeCCCeEEEEeC--CCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCCeEEE
Q 009569 351 CLHVYEKTGVGLISCGWFLDGGGIFAGMT--DKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-REAAILL 427 (532)
Q Consensus 351 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~i 427 (532)
....+...-.....+++.|....|+.+.. .+.|...++++.....+... ......+++++++..|+.+. ..+.|..
T Consensus 114 ~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~-~~~P~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 114 RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPN-VGRANGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECC-CCCcceEEEccccCEEEEEECCCCEEEE
Confidence 33333334456789999986556665542 56888899887655444432 33789999999877776665 5678999
Q ss_pred EECCCCc-eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 428 LDREANF-ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 428 wd~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
+|+.... ..+.........+++.. +..+++-...+.|...|..++
T Consensus 193 ~d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 193 SNMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred EcCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence 9997755 33333334456788764 444444445788888887655
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.80 E-value=0.0094 Score=62.64 Aligned_cols=224 Identities=12% Similarity=0.008 Sum_probs=132.0
Q ss_pred CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeC-CCcEEEEECCCCcE-EEEeeccCCceEEEEEeeC
Q 009569 293 DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQ-EEAIRRWDVNSGEC-LHVYEKTGVGLISCGWFLD 370 (532)
Q Consensus 293 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~~-~~~~~~~~~~i~~~~~~~~ 370 (532)
...|+..++.... ... ......-..+..++|++.+..|+.+.. .+.|..+++..... ...+...-.....+++.+.
T Consensus 17 ~~~I~~i~~~~~~-~~~-~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 17 RRDLRLVDATNGK-ENA-TIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp SSBEEEECCC-----------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETT
T ss_pred cccEEEEeCCCCc-ceE-EEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec
Confidence 4567777776321 011 122223445779999997776666554 57899999875532 2333333356889999985
Q ss_pred CCeEEE-EeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC--CCeEEEEECCCCc-eeee-ecCCcee
Q 009569 371 GGGIFA-GMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR--EAAILLLDREANF-ERWI-EEEEVIT 445 (532)
Q Consensus 371 ~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~I~iwd~~~~~-~~~~-~~~~~i~ 445 (532)
+..++. -...+.|.+.++++................++++|.+..|+.+.. .+.|...++.... ..+. ..-....
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~ 174 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPN 174 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCc
Confidence 555554 456789999999886554444333346889999998666666653 4678888877655 2332 2345678
Q ss_pred EEEEcCCCCEEEEEe-cCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCcee
Q 009569 446 SFSLSKDNKYLLVNL-INQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 446 ~~~~sp~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~~~ 523 (532)
.++++++++.|+.+. ..+.|..+|+... .......+.......+. + ..+ .+.++-...+.|...|..++....
T Consensus 175 Glald~~~~~LY~aD~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gi~--~-~~~-~ly~td~~~~~V~~~d~~tg~~~~ 248 (619)
T 3s94_A 175 GLTLDYEEQKLYWADAKLNFIHKSNLDGT-NRQAVVKGSLPHPFALT--L-FED-ILYWTDWSTHSILACNKYTGEGLR 248 (619)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEESSSCC-EEC---------CCCEE--E-SSS-EEEEECTTTCSEEEEESSSCCCCE
T ss_pred EEEEEccCCEEEEEeCCCCeEEEecCCCC-ccEEEEeCCCCCceEEE--E-eCC-EEEEecCCCCEEEEEECCCCcccE
Confidence 999999776666654 4567888888654 22211221111111222 2 223 455555567889999988876443
No 304
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.77 E-value=0.0068 Score=57.81 Aligned_cols=230 Identities=8% Similarity=0.043 Sum_probs=121.1
Q ss_pred EEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeC----C-------CcEEEEECCCCcEEEE
Q 009569 286 YLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQ----E-------EAIRRWDVNSGECLHV 354 (532)
Q Consensus 286 ~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~----d-------g~i~iwd~~~~~~~~~ 354 (532)
+++.|+ ..+.+||..++ .+.. ..+..............++..++.|+. + ..+.+||..+.+....
T Consensus 7 l~~~GG--~~~~~yd~~~~-~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAAN-ECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp EEEEET--TEEEEEETTTT-EEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred EEEEcC--CceEEECCCCC-eEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 344555 57889998864 3433 333222223333334457777777773 1 1278899988764332
Q ss_pred eeccCCceEEEEEeeCCCeEEEEeCC--------CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC-C---
Q 009569 355 YEKTGVGLISCGWFLDGGGIFAGMTD--------KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR-E--- 422 (532)
Q Consensus 355 ~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d--- 422 (532)
-.............-++..++.|+.+ ..+.+||..+..-..............+...+++.++.|+. +
T Consensus 83 ~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 83 PPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRK 162 (315)
T ss_dssp CCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSC
T ss_pred CCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCc
Confidence 11111111111112266677777632 45899999887654443322222222223346667777765 2
Q ss_pred --CeEEEEECCCCc-eeeeecCCc--eeEEEEcCCCCEEEEEecCC-----eEEEEecCCCCcceeEEeccccceEEEEE
Q 009569 423 --AAILLLDREANF-ERWIEEEEV--ITSFSLSKDNKYLLVNLINQ-----EIHLWSIESDPKLVSRYKGHKRARFVIRS 492 (532)
Q Consensus 423 --g~I~iwd~~~~~-~~~~~~~~~--i~~~~~sp~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~i~~ 492 (532)
..+.+||..+.. ........+ -.+++. -++++++.|+.++ .+.+||+.+. + -..+.....+.....+
T Consensus 163 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~-~-W~~~~~~p~~r~~~~~ 239 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDN-K-WAPFEAFPQERSSLSL 239 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTT-E-EEEECCCSSCCBSCEE
T ss_pred ccceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCC-e-EEECCCCCCcccceeE
Confidence 469999998876 222111111 112222 2677888887654 5888998765 2 1222211111111111
Q ss_pred ccCCCCCcEEEEEeCC--------------CcEEEEeCCCCCceee
Q 009569 493 CFGGFEQAFIASGSED--------------SQVNIFLSFSPFAKKI 524 (532)
Q Consensus 493 ~~~s~d~~~l~sgs~d--------------g~i~iw~~~~~~~~~~ 524 (532)
+ ..++++++.|+.+ ..|.+||+.+.....+
T Consensus 240 ~--~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 240 V--SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp E--EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred E--EECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 1 1256777777764 2478999998876665
No 305
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.75 E-value=9.5e-05 Score=79.17 Aligned_cols=206 Identities=12% Similarity=-0.016 Sum_probs=121.0
Q ss_pred ccEEEEEEccCCCEEEEE-eCCCeEEEEEeecCCe-eEEEEEeecCCCCeEEEEeCCCCC-EEEEeeCCCcEEEEECCCC
Q 009569 273 DEVWFLQFSHDGKYLASS-SKDQSAIIWEVKEDGQ-VSLKHRLSGHRKPVFTVSWSPNDH-QLLTCGQEEAIRRWDVNSG 349 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~-s~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~~~dg~i~iwd~~~~ 349 (532)
..+..++|++.+..|+.+ ...+.|+.+++..... ......+.........+++.+.+. ++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 345688999866665554 4567888888864100 001111111112345678875444 4444455688999998765
Q ss_pred cEEEEeeccCCceEEEEEeeCCCeEEEEeC--CCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCCeEE
Q 009569 350 ECLHVYEKTGVGLISCGWFLDGGGIFAGMT--DKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-REAAIL 426 (532)
Q Consensus 350 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~ 426 (532)
.....+.........+++.|.+..|+.+.. .+.|..+++.+.....+........+.|+|+|++..|+.+. ..+.|.
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 544444333345678889986655555443 27888888876544333322233578899999766555544 667899
Q ss_pred EEECCCCc-eeeeec---CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEE
Q 009569 427 LLDREANF-ERWIEE---EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRY 480 (532)
Q Consensus 427 iwd~~~~~-~~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 480 (532)
.+|+.... ..+... ......|++..+ .++++....+.|..+|..++ +.+..+
T Consensus 566 ~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G-~~~~~i 621 (699)
T 1n7d_A 566 SIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTG-SDVNLL 621 (699)
T ss_dssp EECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTE-EEEECC
T ss_pred EEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCC-CceEEe
Confidence 99997654 222221 123456666543 44445555678999997666 444444
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.74 E-value=0.0077 Score=63.29 Aligned_cols=199 Identities=7% Similarity=-0.054 Sum_probs=123.2
Q ss_pred cccEEEEEEccCCCEEEEE-eCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEe-eCCCcEEEEECCCC
Q 009569 272 SDEVWFLQFSHDGKYLASS-SKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTC-GQEEAIRRWDVNSG 349 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~-s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~iwd~~~~ 349 (532)
-..+..++|++.+..|..+ ...+.|..++...... ....+...-.....+++.+.+..|+.+ ...+.|.+.+....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~--~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES--VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc--eEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 3457799999966655544 4567888888863311 112233333567889998866555554 45689999998765
Q ss_pred cEEEEeeccCCceEEEEEeeCCCeEEEEeC--CCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEE-CCCeEE
Q 009569 350 ECLHVYEKTGVGLISCGWFLDGGGIFAGMT--DKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISIC-REAAIL 426 (532)
Q Consensus 350 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~I~ 426 (532)
.....+...-.....+++.|.+..++.+.. .+.|...++++.....+..........+++++++..|+.+. ..+.|.
T Consensus 117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~ 196 (619)
T 3s94_A 117 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 196 (619)
T ss_dssp SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEE
T ss_pred CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEE
Confidence 443333344455778999997666665553 46788888887655444433334789999999777666665 567899
Q ss_pred EEECCCCce-eeee-cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 427 LLDREANFE-RWIE-EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 427 iwd~~~~~~-~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
.+|+..... .+.. .......+++..+ ..+++-...+.|...|..++
T Consensus 197 ~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 197 KSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp EESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSC
T ss_pred EecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCC
Confidence 999877552 2221 2223456777655 34444445678888887665
No 307
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.73 E-value=0.0024 Score=66.75 Aligned_cols=188 Identities=7% Similarity=0.021 Sum_probs=118.3
Q ss_pred CCEEEEeeC-CCcEEEEEC-CCCcEEEEeeccCCc-----------eEEEEEeeCCCe----EEEEeCCCcEEEEECCCC
Q 009569 329 DHQLLTCGQ-EEAIRRWDV-NSGECLHVYEKTGVG-----------LISCGWFLDGGG----IFAGMTDKSICLWDLDGR 391 (532)
Q Consensus 329 ~~~l~s~~~-dg~i~iwd~-~~~~~~~~~~~~~~~-----------i~~~~~~~~~~~----l~~~~~dg~i~iwd~~~~ 391 (532)
+..+++++. ++.|.-+|. .+|+.+..+...... ...+.+.|.+.. +++++.|+.+.-+|.+++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 456666676 889999999 899998877643211 123455444445 888889999999999876
Q ss_pred eEEEeecCcc----CceEE-EEEeeCCCEEEEEE------CCCeEEEEECCCCceeeeec-CCce---------------
Q 009569 392 ELESWKGQKT----LRISD-MAITDDGKRIISIC------REAAILLLDREANFERWIEE-EEVI--------------- 444 (532)
Q Consensus 392 ~~~~~~~~~~----~~v~~-~~~s~~~~~l~~~~------~dg~I~iwd~~~~~~~~~~~-~~~i--------------- 444 (532)
++.-...... ..+.+ ..+ .++ .+++++ .++.|+-+|.++++...... ..+.
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 6542221110 01111 111 134 555554 37999999999988332211 1110
Q ss_pred ------------------------eEEEEcCCCCEEEEEecC----------------CeEEEEecCCCCcceeEEeccc
Q 009569 445 ------------------------TSFSLSKDNKYLLVNLIN----------------QEIHLWSIESDPKLVSRYKGHK 484 (532)
Q Consensus 445 ------------------------~~~~~sp~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~~ 484 (532)
..+++.++...++.++.+ +.|..+|..++ +.+-.++...
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG-~~~W~~q~~~ 298 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTG-EAKFGYQKTP 298 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTC-CEEEEEESST
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCC-ceeeEeecCC
Confidence 145677777888888765 37999999998 7776666432
Q ss_pred cc---------eEEEEEccCCCCC---cEEEEEeCCCcEEEEeCCCCCc
Q 009569 485 RA---------RFVIRSCFGGFEQ---AFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 485 ~~---------~~~i~~~~~s~d~---~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
.. ....... ..+| ..++.++.+|.++++|..+|+.
T Consensus 299 ~d~wd~d~~~~p~l~d~~--~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 299 HDEWDYAGVNVMMLSEQK--DKDGKARKLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp TCSSCCCCCCCCEEEEEE--CTTSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred CccccccCCCccEEEecc--ccCCcEEEEEEEECCCcEEEEEECCCCCE
Confidence 21 1111110 1466 5778889999999999999874
No 308
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.66 E-value=0.0059 Score=58.08 Aligned_cols=231 Identities=10% Similarity=-0.035 Sum_probs=121.3
Q ss_pred CCCEEEEEeCC----CeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeC----C-----CcEEEEECCCC
Q 009569 283 DGKYLASSSKD----QSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQ----E-----EAIRRWDVNSG 349 (532)
Q Consensus 283 ~g~~las~s~d----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~----d-----g~i~iwd~~~~ 349 (532)
++.+++.|+.+ ..+.+||..+. .+..+..+.........+.+ ++..++.|+. + ..+.+||..+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNG-TWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTT-EEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCC-eEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 55666666632 35788887753 33332222211111122222 5667777765 2 46889999877
Q ss_pred cEEEEeecc--CCceEEEEEeeCCCeEEEEeCC-----CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECC
Q 009569 350 ECLHVYEKT--GVGLISCGWFLDGGGIFAGMTD-----KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICRE 422 (532)
Q Consensus 350 ~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 422 (532)
+....-... ......+. -+++.++.|+.+ ..+.+||+.+..-..............+..-+++.++.|+.+
T Consensus 101 ~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 178 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFD 178 (308)
T ss_dssp EEEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred eEeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCC
Confidence 643321111 11112222 267777777643 468899998766554433222111111222266677777654
Q ss_pred -----CeEEEEECCCCc-eeeee---cCCceeEEEEcCCCCEEEEEecC-----CeEEEEecCCCCcceeEEeccccceE
Q 009569 423 -----AAILLLDREANF-ERWIE---EEEVITSFSLSKDNKYLLVNLIN-----QEIHLWSIESDPKLVSRYKGHKRARF 488 (532)
Q Consensus 423 -----g~I~iwd~~~~~-~~~~~---~~~~i~~~~~sp~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~ 488 (532)
..+.+||+.+.. ..... .......+.+ ++++++.|+.+ ..+.+||+.+. +- ..+.....+..
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W-~~~~~~p~~r~ 254 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE-TW-TFVAPMKHRRS 254 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT-EE-EECCCCSSCCB
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC-cE-EECCCCCCCcc
Confidence 468999998876 22211 1111222222 67777777664 46899998775 21 11111111111
Q ss_pred EEEEccCCCCCcEEEEEeCC-----CcEEEEeCCCCCceee
Q 009569 489 VIRSCFGGFEQAFIASGSED-----SQVNIFLSFSPFAKKI 524 (532)
Q Consensus 489 ~i~~~~~s~d~~~l~sgs~d-----g~i~iw~~~~~~~~~~ 524 (532)
...++. .++++++.|+.+ ..+.+||+.+.....+
T Consensus 255 ~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 255 ALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp SCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred ceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 111111 256777777754 4588999998876655
No 309
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.61 E-value=0.084 Score=59.51 Aligned_cols=255 Identities=11% Similarity=0.050 Sum_probs=141.8
Q ss_pred cccEEEEEEccC------CCEEEEEeC-CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeC--CCCCEEEEeeCCCcEE
Q 009569 272 SDEVWFLQFSHD------GKYLASSSK-DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWS--PNDHQLLTCGQEEAIR 342 (532)
Q Consensus 272 ~~~V~~v~~s~~------g~~las~s~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s--~~~~~l~s~~~dg~i~ 342 (532)
.++|.|+++.|. +.++|.|.. |++|+|+++.+-..+ ....+.. .....++.+. ....+|..|-.||.+.
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~-~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~ 630 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL-HKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALF 630 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE-EEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE-EEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEE
Confidence 468999999873 369999996 999999999754322 2223322 1233333332 2345788888999876
Q ss_pred EEEC--CCCcEEEE--eeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccCceEE-EEEeeC--CCE
Q 009569 343 RWDV--NSGECLHV--YEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISD-MAITDD--GKR 415 (532)
Q Consensus 343 iwd~--~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~-~~~s~~--~~~ 415 (532)
.+.+ .+|+.... ..-...++.=..+...+..-+.+..+....+|--+++-... ......+.. ..|+.. ..-
T Consensus 631 ~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s--~l~~~~v~~~~~F~se~~~~g 708 (1158)
T 3ei3_A 631 YFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFS--NVNLKEVNYMCPLNSDGYPDS 708 (1158)
T ss_dssp EEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEE--EBSSSCCCEEEEECCSSSTTE
T ss_pred EEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEe--ccChHHhceEeccCcccCCCc
Confidence 6555 45544321 11123344333343344443344445555555544432222 111113333 334432 234
Q ss_pred EEEEECCCeEEEEECCCCc---eeeeecCCceeEEEEcCCCCEEEEEecC------------------------------
Q 009569 416 IISICREAAILLLDREANF---ERWIEEEEVITSFSLSKDNKYLLVNLIN------------------------------ 462 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~~~---~~~~~~~~~i~~~~~sp~~~~l~~~~~d------------------------------ 462 (532)
++..+ ++.++|..+.... ...+.....+..++++|+.+.++++..+
T Consensus 709 ~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1158)
T 3ei3_A 709 LALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK 787 (1158)
T ss_dssp EEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCC
T ss_pred EEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccc
Confidence 55443 4568888775433 5556667788999999988766554321
Q ss_pred -------------------CeEEEEecCCCCcceeEEecc--ccceEEEEEccCCCCCcEEEEEe----------CCCcE
Q 009569 463 -------------------QEIHLWSIESDPKLVSRYKGH--KRARFVIRSCFGGFEQAFIASGS----------EDSQV 511 (532)
Q Consensus 463 -------------------g~i~iwd~~~~~~~~~~~~~~--~~~~~~i~~~~~s~d~~~l~sgs----------~dg~i 511 (532)
+.|++.|-.+. +.+..+.-. .....+..+.|.+....+++.|+ ..|.|
T Consensus 788 ~~~~~~~~~~~~~g~~~~~s~i~lidp~t~-~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri 866 (1158)
T 3ei3_A 788 LFSSSTAPHETSFGEEVEVHNLLIIDQHTF-EVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRI 866 (1158)
T ss_dssp CC----------CCCEEEEEEEEEEETTTC-CEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEE
T ss_pred cccccccCchhhcCCceeeEEEEEEeCCCC-eEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEE
Confidence 23666776655 555554322 22223333444333357888886 35889
Q ss_pred EEEeCCCCCceeeeccccCCC
Q 009569 512 NIFLSFSPFAKKIKYTSMKGA 532 (532)
Q Consensus 512 ~iw~~~~~~~~~~~~~~~~~a 532 (532)
++|++..++.+.+..+.++|+
T Consensus 867 ~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 867 VVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEECCEEEEEEEEEcCCc
Confidence 999998666666655555553
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.58 E-value=0.035 Score=53.64 Aligned_cols=135 Identities=11% Similarity=0.157 Sum_probs=84.0
Q ss_pred CCCcEEEEECCC--CcEEEEee--c-----cCCceEEEEEee--CCC-eEEEEe-C--CCcEEEEECC--CCeEE---Ee
Q 009569 337 QEEAIRRWDVNS--GECLHVYE--K-----TGVGLISCGWFL--DGG-GIFAGM-T--DKSICLWDLD--GRELE---SW 396 (532)
Q Consensus 337 ~dg~i~iwd~~~--~~~~~~~~--~-----~~~~i~~~~~~~--~~~-~l~~~~-~--dg~i~iwd~~--~~~~~---~~ 396 (532)
.+|.|.++|..+ ++. ..+. + .......+.+.+ ++. +|+++. . +.+|.+|+++ +.... .+
T Consensus 81 ~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 688999999873 332 2222 2 224567788776 343 344443 2 4567777764 33322 22
Q ss_pred ecCccCceEEEEEeeCCCEEEEEE-----------------CCCeEEEEECCCCceeeeecCCceeEEEEcCCCCEEEEE
Q 009569 397 KGQKTLRISDMAITDDGKRIISIC-----------------REAAILLLDREANFERWIEEEEVITSFSLSKDNKYLLVN 459 (532)
Q Consensus 397 ~~~~~~~v~~~~~s~~~~~l~~~~-----------------~dg~I~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~ 459 (532)
....-...+++++.++|.+.++.. ..|.|+.+|... .......-...+.++||||++.|+++
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~-~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND-VRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC-CEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe-EEEeecCCcccCcceECCCCCEEEEE
Confidence 233334689999999998777654 125566676631 13333444567899999999888777
Q ss_pred e-cCCeEEEEecCCC
Q 009569 460 L-INQEIHLWSIESD 473 (532)
Q Consensus 460 ~-~dg~i~iwd~~~~ 473 (532)
. ..+.|+.|++...
T Consensus 239 dt~~~~I~~~~~~~~ 253 (355)
T 3sre_A 239 ELLAHKIHVYEKHAN 253 (355)
T ss_dssp EGGGTEEEEEEECTT
T ss_pred eCCCCeEEEEEECCC
Confidence 5 4678999998643
No 311
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.50 E-value=0.018 Score=54.97 Aligned_cols=228 Identities=10% Similarity=0.120 Sum_probs=117.2
Q ss_pred EEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeC----CC-------cEEEEECCCCcEEEE
Q 009569 286 YLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQ----EE-------AIRRWDVNSGECLHV 354 (532)
Q Consensus 286 ~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~----dg-------~i~iwd~~~~~~~~~ 354 (532)
+++.|+. .+.+||..++ .+.. .................++..++.|+. ++ .+.+||..+.+....
T Consensus 18 i~~~GG~--~~~~yd~~~~-~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMEN-ECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp EEEECSS--EEEEEETTTT-EEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred hhhcccc--ceEEECCCCC-ceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 3444543 4788888754 3333 222221222223333456777777773 11 277889887765432
Q ss_pred eeccCCc-eEEEEEeeCCCeEEEEeCC-------CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC-----
Q 009569 355 YEKTGVG-LISCGWFLDGGGIFAGMTD-------KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR----- 421 (532)
Q Consensus 355 ~~~~~~~-i~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----- 421 (532)
-...... -.+++. -++..++.|+.+ ..+.+||+.+..-..............+...+++.++.|+.
T Consensus 94 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 94 PPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKK 172 (318)
T ss_dssp SCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSC
T ss_pred CCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCC
Confidence 1111111 112222 267777777754 25888999876655443322211111222246667777653
Q ss_pred -CCeEEEEECCCCc-eeeeecC--CceeEEEEcCCCCEEEEEecC-----CeEEEEecCCCC-cceeEEeccccceEEEE
Q 009569 422 -EAAILLLDREANF-ERWIEEE--EVITSFSLSKDNKYLLVNLIN-----QEIHLWSIESDP-KLVSRYKGHKRARFVIR 491 (532)
Q Consensus 422 -dg~I~iwd~~~~~-~~~~~~~--~~i~~~~~sp~~~~l~~~~~d-----g~i~iwd~~~~~-~~~~~~~~~~~~~~~i~ 491 (532)
-..+.+||..+.. ....... ..-.+++. -++++++.|+.+ ..+.+||+.+.. ..+..+...... ..
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~---~~ 248 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSS---IS 248 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBS---CE
T ss_pred ccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccc---eE
Confidence 2459999998877 2221111 11112222 256777777653 357789987651 112111111111 11
Q ss_pred EccCCCCCcEEEEEeCC--------------CcEEEEeCCCCCceee
Q 009569 492 SCFGGFEQAFIASGSED--------------SQVNIFLSFSPFAKKI 524 (532)
Q Consensus 492 ~~~~s~d~~~l~sgs~d--------------g~i~iw~~~~~~~~~~ 524 (532)
++ ..++.+++.|+.+ ..+.+||+.+.....+
T Consensus 249 ~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 249 LV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred EE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 11 2356777777654 4588999998876665
No 312
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.47 E-value=0.032 Score=54.14 Aligned_cols=234 Identities=12% Similarity=0.116 Sum_probs=119.9
Q ss_pred cccEEEEEEccCCC-EEEEEeCCCeEEEEEeecCCeeE-EEEE----eecCCCCeEEEEeCCC---CCEEEEee-C----
Q 009569 272 SDEVWFLQFSHDGK-YLASSSKDQSAIIWEVKEDGQVS-LKHR----LSGHRKPVFTVSWSPN---DHQLLTCG-Q---- 337 (532)
Q Consensus 272 ~~~V~~v~~s~~g~-~las~s~dg~i~iwd~~~~~~~~-~~~~----~~~h~~~v~~l~~s~~---~~~l~s~~-~---- 337 (532)
-...+.++|.|+|+ +++ +...|.|++++.. +... .+.. ..........++|+|+ +..|+.+. .
T Consensus 17 l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~--g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLI-TLRGGELRHWQAG--KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp ESSEEEEEECSTTCCEEE-EETTTEEEEEETT--TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CCCcEEEEEcCCCCEEEE-EeCCceEEEEeCC--CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 34578999999999 555 4567899888743 2211 1111 1112345689999996 44444442 2
Q ss_pred ---CCcEEEEECCCC--c--EEE-Eeec------cCCceEEEEEeeCCCeEEEEeC-------------CCcEEEEECCC
Q 009569 338 ---EEAIRRWDVNSG--E--CLH-VYEK------TGVGLISCGWFLDGGGIFAGMT-------------DKSICLWDLDG 390 (532)
Q Consensus 338 ---dg~i~iwd~~~~--~--~~~-~~~~------~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~ 390 (532)
...|..|+...+ . ... .+.. .......+.|.|||.++++.+. .|.|.-+|.++
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 235666766533 1 111 1211 1122457999999966555432 24677777765
Q ss_pred C-------------eEEEeecCccCceEEEEEeeCCCEEEEEECCC----eEEEEECCCC--------------------
Q 009569 391 R-------------ELESWKGQKTLRISDMAITDDGKRIISICREA----AILLLDREAN-------------------- 433 (532)
Q Consensus 391 ~-------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----~I~iwd~~~~-------------------- 433 (532)
. ....+...+. ....++|+|+...|.++.... .|.+......
T Consensus 174 ~~p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~ 252 (353)
T 2g8s_A 174 EIPDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEA 252 (353)
T ss_dssp CCCTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTC
T ss_pred CCCCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcc
Confidence 3 1111222222 578899999433444443321 2222111000
Q ss_pred --------c--eeeeecCCceeEEEEcC-------CCCEEEEEecCCeEEEEecCCCCcceeEEecc-ccceEEEEEccC
Q 009569 434 --------F--ERWIEEEEVITSFSLSK-------DNKYLLVNLINQEIHLWSIESDPKLVSRYKGH-KRARFVIRSCFG 495 (532)
Q Consensus 434 --------~--~~~~~~~~~i~~~~~sp-------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~i~~~~~ 495 (532)
. .....+...+..+.|.. +++++++....+.|...++..+ ..+....-. ........+++
T Consensus 253 ~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~rp~~v~~- 330 (353)
T 2g8s_A 253 KGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD-KVTEDGRILTDRGQRIRDVRT- 330 (353)
T ss_dssp CBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT-EEEEEEEESGGGCCCEEEEEE-
T ss_pred cCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC-eEeeeEEcccCCCCceeEEEE-
Confidence 0 00011223466777764 4677777667788888887754 333221110 11112344555
Q ss_pred CCCCcEEEEEe-CCCcE
Q 009569 496 GFEQAFIASGS-EDSQV 511 (532)
Q Consensus 496 s~d~~~l~sgs-~dg~i 511 (532)
.|||.+.++.. .+|.|
T Consensus 331 ~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 331 GPDGYLYVLTDESSGEL 347 (353)
T ss_dssp CTTSCEEEEECSTTEEE
T ss_pred CCCCcEEEEEeCCCCEE
Confidence 78887655432 34444
No 313
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.042 Score=55.47 Aligned_cols=196 Identities=10% Similarity=0.144 Sum_probs=114.4
Q ss_pred ccEEEEEE-------ccCCCEEEEEeCCC-------eEEEEEeecCCee------EEEEEeecCCCCeEEEEeCCCC-CE
Q 009569 273 DEVWFLQF-------SHDGKYLASSSKDQ-------SAIIWEVKEDGQV------SLKHRLSGHRKPVFTVSWSPND-HQ 331 (532)
Q Consensus 273 ~~V~~v~~-------s~~g~~las~s~dg-------~i~iwd~~~~~~~------~~~~~~~~h~~~v~~l~~s~~~-~~ 331 (532)
.....++| +++|.+|+.+...+ .|.+++...++.+ ..+..+. ....++++|++ .+
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~----~p~giavdp~~g~L 261 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK----QCNGATIHPINGEL 261 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES----CCCCEEECTTTCCE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC----CceEEEEcCCCCeE
Confidence 35889999 99999666665443 2556654432233 1222221 23467889954 44
Q ss_pred EEEeeCCCcEEEEECC-------CCcE-----------EEE-eec-cCCceEEEEEeeCCCeEEEE-eCCCcEEEEECC-
Q 009569 332 LLTCGQEEAIRRWDVN-------SGEC-----------LHV-YEK-TGVGLISCGWFLDGGGIFAG-MTDKSICLWDLD- 389 (532)
Q Consensus 332 l~s~~~dg~i~iwd~~-------~~~~-----------~~~-~~~-~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~- 389 (532)
+++-..++.|..+|+. ++.. ... +.. .......++|+|+++.++.+ +..+.|+.++..
T Consensus 262 Yvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 262 YFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 5555567889999987 5543 111 222 23446789999999965555 456788886654
Q ss_pred -CCeE---EEeecC--c------------cCceE-EEEEe-------eCCCEEEEEECCCeEEEEECCCCc-eeeeec--
Q 009569 390 -GREL---ESWKGQ--K------------TLRIS-DMAIT-------DDGKRIISICREAAILLLDREANF-ERWIEE-- 440 (532)
Q Consensus 390 -~~~~---~~~~~~--~------------~~~v~-~~~~s-------~~~~~l~~~~~dg~I~iwd~~~~~-~~~~~~-- 440 (532)
.+.+ ..+... . -.... .++.. +++.++++=...++|+.++. ++. .++.+.
T Consensus 342 ~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~v~TiaG~g~ 420 (496)
T 3kya_A 342 IKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGIVSTYAGRGA 420 (496)
T ss_dssp TTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCBEEEEEESCT
T ss_pred CcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCCEEEEecccc
Confidence 3332 112111 0 01234 44554 45666666567788999984 334 333221
Q ss_pred ----------------------CCceeEEEEcCC-CCEEEEEecCCeEEEEecCCC
Q 009569 441 ----------------------EEVITSFSLSKD-NKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 441 ----------------------~~~i~~~~~sp~-~~~l~~~~~dg~i~iwd~~~~ 473 (532)
-.....|+++++ +.++++=..+..|+.+++...
T Consensus 421 ~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 421 STSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp THHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred cccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 123567888886 555555555667888887665
No 314
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.44 E-value=0.015 Score=55.05 Aligned_cols=181 Identities=10% Similarity=0.038 Sum_probs=107.9
Q ss_pred EEeCCCCCEEEEeeCC--------------CcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEe----CCCcEE
Q 009569 323 VSWSPNDHQLLTCGQE--------------EAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGM----TDKSIC 384 (532)
Q Consensus 323 l~~s~~~~~l~s~~~d--------------g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~dg~i~ 384 (532)
-.+++++.+|+-+... ..|+..++..++... +.... +..|+++++.|+-.. .+..|+
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPDP----CIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECSC----EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecCC----ccEEEEeCCEEEEEeecCCCCceEE
Confidence 3557788888877653 367888887665333 22211 236788888888765 345677
Q ss_pred EEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC-CCeEEEEECCCCceeeeecCCceeEEEEcCCCCEEEEEecC-
Q 009569 385 LWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR-EAAILLLDREANFERWIEEEEVITSFSLSKDNKYLLVNLIN- 462 (532)
Q Consensus 385 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~I~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d- 462 (532)
..++++.....+.... + .+++++++.|+..+. ...|.+.++.......+. ..... ..++|++.+|+-....
T Consensus 133 ~~~~dGs~~~~lt~~~---~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~-~~~~~-~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 133 RIRIDGEEKKKIKNHY---L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY-DCNCY-KPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp EEETTSCCCEEEESSC---C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE-CSCEE-EEEEEETTEEEEEEGGG
T ss_pred EEECCCCCeEEEeCCC---c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe-CCCcc-ceeeecCCEEEEEEcCC
Confidence 7788876555555433 2 456888988887665 678999998877633332 22222 3466999988877644
Q ss_pred -CeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEe--CCCcEEEEeCCCCCceee
Q 009569 463 -QEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGS--EDSQVNIFLSFSPFAKKI 524 (532)
Q Consensus 463 -g~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs--~dg~i~iw~~~~~~~~~~ 524 (532)
..|..-++... ....+..... ..+ +|++.+|+-++ ..+.|..-++.....+++
T Consensus 206 ~~~I~~~~ldG~--~~~~Lt~~~~------~~~-~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l 261 (302)
T 3s25_A 206 DNAIVHVNINNP--NPVVLTEANI------EHY-NVYGSLIFYQRGGDNPALCVVKNDGTGFKEL 261 (302)
T ss_dssp TTEEEEECSSSC--CCEECSCSCE------EEE-EEETTEEEEEECSSSCEEEEEETTSCCCEEE
T ss_pred CcEEEEEECCCC--CeEEEeCCCc------ceE-EECCCEEEEEECCCCcEEEEEECCCCccEEe
Confidence 35767776654 2333332111 112 66677766542 234566666655443333
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.38 E-value=0.014 Score=54.99 Aligned_cols=187 Identities=10% Similarity=-0.000 Sum_probs=103.3
Q ss_pred CCCEEEEEeCC-----CeEEEEEeecCCe--eEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC-----CcEEEEECCCCc
Q 009569 283 DGKYLASSSKD-----QSAIIWEVKEDGQ--VSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE-----EAIRRWDVNSGE 350 (532)
Q Consensus 283 ~g~~las~s~d-----g~i~iwd~~~~~~--~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~ 350 (532)
++..++.|+.+ ..+.+||..++.. +.....+.........+.+ ++..++.|+.+ ..+.+||..+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 66777777754 4688899876431 4333333222222223333 56777777654 368899998776
Q ss_pred EEEEeeccCCceEEEEEeeCCCeEEEEeCC-----CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECC---
Q 009569 351 CLHVYEKTGVGLISCGWFLDGGGIFAGMTD-----KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICRE--- 422 (532)
Q Consensus 351 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--- 422 (532)
....-..........+...+++.++.|+.+ ..+.+||+.+..-..............+..-+++.++.|+.+
T Consensus 140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA 219 (301)
T ss_dssp EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCc
Confidence 443322111111111222367777777754 468999998876555433222122222222356677777654
Q ss_pred --CeEEEEECCCCc-eeeeec---CCceeEEEEcCCCCEEEEEecC-----CeEEEEecCCC
Q 009569 423 --AAILLLDREANF-ERWIEE---EEVITSFSLSKDNKYLLVNLIN-----QEIHLWSIESD 473 (532)
Q Consensus 423 --g~I~iwd~~~~~-~~~~~~---~~~i~~~~~sp~~~~l~~~~~d-----g~i~iwd~~~~ 473 (532)
..+.+||+.+.. ...... ......+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 220 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 220 HLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred ccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 469999998877 222111 111122222 67777777765 35788888765
No 316
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.33 E-value=0.048 Score=52.85 Aligned_cols=139 Identities=13% Similarity=0.127 Sum_probs=83.4
Q ss_pred CCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEE--Eee---ccCCceEEEEEeeC---CCeEEEEeCC------CcE
Q 009569 318 KPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLH--VYE---KTGVGLISCGWFLD---GGGIFAGMTD------KSI 383 (532)
Q Consensus 318 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~---~~~~~i~~~~~~~~---~~~l~~~~~d------g~i 383 (532)
.....++|.|+|+++++ ..+|.|.+++ +++... .+. ........++++|+ +..|+++... +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34678999999985554 6679999998 444221 111 12456889999998 5566555432 678
Q ss_pred EEEECCCCe------EEE-ee--cCccCceEEEEEeeCCCEEEEEEC-------------CCeEEEEECCCC--------
Q 009569 384 CLWDLDGRE------LES-WK--GQKTLRISDMAITDDGKRIISICR-------------EAAILLLDREAN-------- 433 (532)
Q Consensus 384 ~iwd~~~~~------~~~-~~--~~~~~~v~~~~~s~~~~~l~~~~~-------------dg~I~iwd~~~~-------- 433 (532)
..|+..+.. +.. +. .........++|.|||.++++.+. .+.|.-+|....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 888876431 111 11 111124578999999976666432 257777776641
Q ss_pred -----c-eeeeecCCceeEEEEcC-CCCEEEEE
Q 009569 434 -----F-ERWIEEEEVITSFSLSK-DNKYLLVN 459 (532)
Q Consensus 434 -----~-~~~~~~~~~i~~~~~sp-~~~~l~~~ 459 (532)
. ..+...-.....++|+| ++.++++-
T Consensus 188 ~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 188 GRRGARPEVYSLGHRNPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp TCTTSCTTEEEECCSEECCCEECTTTCCEEEEE
T ss_pred CCCCCCccEEEEcCCCcccEEEECCCCCEEEEE
Confidence 1 12222223467899999 56655543
No 317
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.33 E-value=0.021 Score=53.99 Aligned_cols=186 Identities=10% Similarity=-0.023 Sum_probs=103.8
Q ss_pred CCCEEEEEeCC----CeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC------CcEEEEECCCCcEE
Q 009569 283 DGKYLASSSKD----QSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE------EAIRRWDVNSGECL 352 (532)
Q Consensus 283 ~g~~las~s~d----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d------g~i~iwd~~~~~~~ 352 (532)
++..++.|+.+ ..+.+||..++ .+.....+.........+.+ ++..++.|+.+ ..+.+||..+.+..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKD-SWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTT-EEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCC-eEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 66777777755 66888888754 44444333322222223333 66777777765 46999999887654
Q ss_pred EEeeccCCceEEEEEeeCCCeEEEEeC---------CCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECC-
Q 009569 353 HVYEKTGVGLISCGWFLDGGGIFAGMT---------DKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICRE- 422 (532)
Q Consensus 353 ~~~~~~~~~i~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d- 422 (532)
..-..........+...+++.++.|+. -..+.+||+.+..-..............+..-++++++.|+.+
T Consensus 132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 211 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNG 211 (306)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEET
T ss_pred eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCC
Confidence 332111111111112236677777653 3458899998876555443222122222222356677776643
Q ss_pred ----CeEEEEECCCCc-eeeee---cCCceeEEEEcCCCCEEEEEecC-----CeEEEEecCCC
Q 009569 423 ----AAILLLDREANF-ERWIE---EEEVITSFSLSKDNKYLLVNLIN-----QEIHLWSIESD 473 (532)
Q Consensus 423 ----g~I~iwd~~~~~-~~~~~---~~~~i~~~~~sp~~~~l~~~~~d-----g~i~iwd~~~~ 473 (532)
..+.+||+.+.. ..... ......++.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 212 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 212 LGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp TEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 468999998876 22211 1112223333 67788888754 46888998765
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.25 E-value=0.016 Score=54.65 Aligned_cols=186 Identities=12% Similarity=0.084 Sum_probs=100.8
Q ss_pred CCCEEEEEeCC-----CeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCC-----cEEEEECCCCcEE
Q 009569 283 DGKYLASSSKD-----QSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEE-----AIRRWDVNSGECL 352 (532)
Q Consensus 283 ~g~~las~s~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~ 352 (532)
++..++.|+.+ ..+.+||..+. .+.....+.........+.+ ++..++.|+.++ .+.+||..+.+..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKD-QWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTT-EEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCC-ceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 67777777754 35788888753 34333333222222223333 567777777653 5888998877644
Q ss_pred EEeeccCCce-EEEEEeeCCCeEEEEeCC-------CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECC--
Q 009569 353 HVYEKTGVGL-ISCGWFLDGGGIFAGMTD-------KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICRE-- 422 (532)
Q Consensus 353 ~~~~~~~~~i-~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-- 422 (532)
..-....... .+++. .+++.++.|+.+ ..+.+||+.+..-..............+..-++++++.|+.+
T Consensus 138 ~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 216 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGP 216 (302)
T ss_dssp EECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSS
T ss_pred ecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCC
Confidence 3321111111 12222 366777776642 458899998766554432222111112222356777777654
Q ss_pred ---CeEEEEECCCCc-eeeeecCC--ceeEEEEcCCCCEEEEEecCC-----eEEEEecCCC
Q 009569 423 ---AAILLLDREANF-ERWIEEEE--VITSFSLSKDNKYLLVNLINQ-----EIHLWSIESD 473 (532)
Q Consensus 423 ---g~I~iwd~~~~~-~~~~~~~~--~i~~~~~sp~~~~l~~~~~dg-----~i~iwd~~~~ 473 (532)
..+.+||+.+.. ........ .-.+++. .++++++.|+.++ .+.+||+.+.
T Consensus 217 ~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 217 LVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred cccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 469999998877 22211111 1112222 2677777777653 4888888765
No 319
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.21 E-value=0.024 Score=55.00 Aligned_cols=235 Identities=7% Similarity=0.038 Sum_probs=117.6
Q ss_pred CCCEEEEEeC-CCeEEEEEeec-CCeeEEEEEee-cCCCCeEEEEeCCCCCEEEEeeC-C---------CcEEEEECCCC
Q 009569 283 DGKYLASSSK-DQSAIIWEVKE-DGQVSLKHRLS-GHRKPVFTVSWSPNDHQLLTCGQ-E---------EAIRRWDVNSG 349 (532)
Q Consensus 283 ~g~~las~s~-dg~i~iwd~~~-~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~~~-d---------g~i~iwd~~~~ 349 (532)
++.+++.|+. ...+.+||..+ ...+..+..+. ........+.+ ++..++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 6666666654 34678888763 23443333332 11112222333 5667777765 2 46899999887
Q ss_pred cEEEEeecc-CCceEEEEEeeCCCeEEEEeCC---------------------------------------CcEEEEECC
Q 009569 350 ECLHVYEKT-GVGLISCGWFLDGGGIFAGMTD---------------------------------------KSICLWDLD 389 (532)
Q Consensus 350 ~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d---------------------------------------g~i~iwd~~ 389 (532)
+-...-... .......+...+++.++.|+.+ ..+.+||+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 644322211 1111122222577788888754 578999998
Q ss_pred CCeEEEeecCccC-ce-EEEEEeeCCCEEEEEEC------CCeEEEEEC--CCCc-eeeeec--C-CceeEEEEcCCCCE
Q 009569 390 GRELESWKGQKTL-RI-SDMAITDDGKRIISICR------EAAILLLDR--EANF-ERWIEE--E-EVITSFSLSKDNKY 455 (532)
Q Consensus 390 ~~~~~~~~~~~~~-~v-~~~~~s~~~~~l~~~~~------dg~I~iwd~--~~~~-~~~~~~--~-~~i~~~~~sp~~~~ 455 (532)
+..-......... .- .+++. -++++++.|+. ...+.+||+ .+.. ...... . ......+...++++
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i 255 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSL 255 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEE
T ss_pred CCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEE
Confidence 7654444322211 11 22332 35666666653 345778887 4444 221111 1 11111122335677
Q ss_pred EEEEecC----------------------CeEEEEecCCC-CcceeEEeccccceEEEEEccCCCCCcEEEEEeCCC---
Q 009569 456 LLVNLIN----------------------QEIHLWSIESD-PKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDS--- 509 (532)
Q Consensus 456 l~~~~~d----------------------g~i~iwd~~~~-~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg--- 509 (532)
++.|+.+ ..+.+||+.+. ...+..+......... + ..++++++.|+.++
T Consensus 256 yv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~---~~~~~i~v~GG~~~~~~ 330 (357)
T 2uvk_A 256 IFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--L---PWNNSLLIIGGETAGGK 330 (357)
T ss_dssp EEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--E---EETTEEEEEEEECGGGC
T ss_pred EEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--E---EeCCEEEEEeeeCCCCC
Confidence 7777632 25788998765 1222222221111111 1 23677888888653
Q ss_pred ---cEEEEeCCCCCceeee
Q 009569 510 ---QVNIFLSFSPFAKKIK 525 (532)
Q Consensus 510 ---~i~iw~~~~~~~~~~~ 525 (532)
.|.++++++++.....
T Consensus 331 ~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 331 AVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEEEEEEEC-CCSCEEEC
T ss_pred EeeeEEEEEEcCcEeEeee
Confidence 4667788887765543
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.20 E-value=0.061 Score=52.17 Aligned_cols=140 Identities=13% Similarity=0.152 Sum_probs=83.4
Q ss_pred CCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCc-EEEEee---ccCCceEEEEEeeC---CCeEEEEeC----C----Cc
Q 009569 318 KPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGE-CLHVYE---KTGVGLISCGWFLD---GGGIFAGMT----D----KS 382 (532)
Q Consensus 318 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~---~~~~~i~~~~~~~~---~~~l~~~~~----d----g~ 382 (532)
.....++|.|+|++++ +..+|.|.+++ .+++ .+..+. ........++++|+ +..|+++.. + +.
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4567899999997544 46679999997 4554 222111 12356889999997 555555443 3 56
Q ss_pred EEEEECCCC--e------EEE-eecCccCceEEEEEeeCCCEEEEEEC-------------CCeEEEEECCCC-------
Q 009569 383 ICLWDLDGR--E------LES-WKGQKTLRISDMAITDDGKRIISICR-------------EAAILLLDREAN------- 433 (532)
Q Consensus 383 i~iwd~~~~--~------~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~-------------dg~I~iwd~~~~------- 433 (532)
|..|+..+. . +.. +..........++|.|||.++++.+. .|.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 778887653 1 111 11111124577999999987666432 256777776543
Q ss_pred -c-eeeeecCCceeEEEEcC-CCCEEEEE
Q 009569 434 -F-ERWIEEEEVITSFSLSK-DNKYLLVN 459 (532)
Q Consensus 434 -~-~~~~~~~~~i~~~~~sp-~~~~l~~~ 459 (532)
. ..+...-.....++|+| +++++++-
T Consensus 187 ~~~~i~a~G~rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 187 PNSPIWSYGHRNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp TTCCEEEECCSCCCEEEECTTTCCEEEEE
T ss_pred CCCcEEEEccCCcceEEEeCCCCCEEEEe
Confidence 1 11222223456899999 56655543
No 321
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=97.18 E-value=0.00021 Score=52.31 Aligned_cols=55 Identities=18% Similarity=0.367 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHHHhcChHHHHHHHhhhcCcccCCHHHHHHHHHHhcCChHHHHHH
Q 009569 62 KKSEFIKIITRALYSLGYDKSGALLEEESGIPMHSSVVNQFMQQVMDGYWDESIIT 117 (532)
Q Consensus 62 ~~~e~~~lI~q~L~e~G~~~sa~~L~~Es~i~~~~~~~~~~~~~i~~G~w~~~~~~ 117 (532)
.++|+.+-|++||..+||.+++.+|.+|.+++.+..... -...++.-+|..++.+
T Consensus 9 Q~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~~~~~~~-ky~gLLEKKWTSViRL 63 (88)
T 1uuj_A 9 QRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDK-KYAGLLEKKWTSVIRL 63 (88)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCHHHHH-HHTTHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCCCchhhh-hhhhhhhhhHHHHHHH
Confidence 367999999999999999999999999999988744333 3555777888665553
No 322
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.00 E-value=0.23 Score=46.79 Aligned_cols=177 Identities=9% Similarity=0.050 Sum_probs=106.4
Q ss_pred EEEEccCCCEEEEEeCC--------------CeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEee----CC
Q 009569 277 FLQFSHDGKYLASSSKD--------------QSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCG----QE 338 (532)
Q Consensus 277 ~v~~s~~g~~las~s~d--------------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~----~d 338 (532)
+--++++|.+|+-+... ..|+..++.... ... +.. .. ...|++++++|+-+. .+
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~-~~~---l~~--~~--~~~~s~~g~~Iy~~~~~~~~~ 128 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG-STV---LDP--DP--CIYASLIGNYIYYLHYDTQTA 128 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC-CEE---EEC--SC--EEEEEEETTEEEEEEESSSSC
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc-ceE---eec--CC--ccEEEEeCCEEEEEeecCCCC
Confidence 34568899988876543 245555554332 112 211 11 236777888888776 23
Q ss_pred CcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeC-CCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEE
Q 009569 339 EAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMT-DKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRII 417 (532)
Q Consensus 339 g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 417 (532)
..|...++.... ...+..+.. ..++++++.|+-.+. ...|+..++.++....+... ... ..+.|++.+|+
T Consensus 129 ~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy 199 (302)
T 3s25_A 129 TSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVY 199 (302)
T ss_dssp EEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEE
T ss_pred ceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEE
Confidence 456666765433 344443332 346778888886665 67899999988766555432 222 34669999888
Q ss_pred EEECC--CeEEEEECCCCceeeeecCCceeEEEEcCCCCEEEEEec--CCeEEEEecCCC
Q 009569 418 SICRE--AAILLLDREANFERWIEEEEVITSFSLSKDNKYLLVNLI--NQEIHLWSIESD 473 (532)
Q Consensus 418 ~~~~d--g~I~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--dg~i~iwd~~~~ 473 (532)
-.... ..|..-++.......+.. ..+ ..|+|++++|+.+.. .+.|...++...
T Consensus 200 ~t~~~~~~~I~~~~ldG~~~~~Lt~-~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 200 YMDVNRDNAIVHVNINNPNPVVLTE-ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp EEEGGGTTEEEEECSSSCCCEECSC-SCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred EEEcCCCcEEEEEECCCCCeEEEeC-CCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 77644 468788887766333322 223 348888988886632 356777776554
No 323
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.99 E-value=0.48 Score=51.00 Aligned_cols=233 Identities=9% Similarity=0.073 Sum_probs=133.2
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEe-ecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCc
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRL-SGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGE 350 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 350 (532)
...|.++.-..+|. |..|+.+| +..||-. .+...... ......|.++.-..++ .|..++.+| +..||..+.+
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~---~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~ 93 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGY---STQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADR 93 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSS---CEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTE
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCC---ceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCE
Confidence 45789998888775 44556676 4455532 11111000 1123468888776665 455556554 7899988764
Q ss_pred EEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeec----CccCceEEEEEeeCCCEEEEEECCCeEE
Q 009569 351 CLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKG----QKTLRISDMAITDDGKRIISICREAAIL 426 (532)
Q Consensus 351 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~dg~I~ 426 (532)
...........|.++.. .++ .+.+++.+ .+..+|..+.....+.. .....|.++....+|.+.+ ++.+ -+.
T Consensus 94 f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~ 168 (758)
T 3ott_A 94 YEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLC 168 (758)
T ss_dssp ECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEE
T ss_pred EECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHh
Confidence 33211112234666643 344 56667765 68889988766655421 1223688888888877555 4444 578
Q ss_pred EEECCCCceeeeec-------CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCC
Q 009569 427 LLDREANFERWIEE-------EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQ 499 (532)
Q Consensus 427 iwd~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~ 499 (532)
.||..+........ ...|.++...+++..|.+|+. +.+..+|..+. + +..+..... . .+...+...+|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~-~-~~~~~~l~~-~-~i~~i~~d~~g 243 (758)
T 3ott_A 169 RYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG-Q-IKQTEAFHN-N-SIKSLALDGNG 243 (758)
T ss_dssp EEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT-E-EEEEEEEEE-E-EEEEEEECTTC
T ss_pred hCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC-e-EEeccCCCC-C-eEEEEEEcCCC
Confidence 88887765222111 224788888887776666764 46888887665 3 222221111 1 12222325566
Q ss_pred cEEEEEeCCCcEEEEeCCCCCcee
Q 009569 500 AFIASGSEDSQVNIFLSFSPFAKK 523 (532)
Q Consensus 500 ~~l~sgs~dg~i~iw~~~~~~~~~ 523 (532)
.+.+ |+.+ -+.+++..++....
T Consensus 244 ~lWi-gT~~-Gl~~~~~~~~~~~~ 265 (758)
T 3ott_A 244 DLLA-GTDN-GLYVYHNDTTPLQH 265 (758)
T ss_dssp CEEE-EETT-EEEEECCTTSCCEE
T ss_pred CEEE-EeCC-ceeEEecCCCcEEE
Confidence 5544 5544 58888887765443
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.92 E-value=0.062 Score=51.01 Aligned_cols=190 Identities=12% Similarity=-0.003 Sum_probs=99.0
Q ss_pred EccCCCEEEEEeC----C-------CeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC--------Cc
Q 009569 280 FSHDGKYLASSSK----D-------QSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE--------EA 340 (532)
Q Consensus 280 ~s~~g~~las~s~----d-------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d--------g~ 340 (532)
...++..++.|+. + ..+.+||..++ .+..+..+.........+.+ ++..++.|+.+ ..
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~ 118 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS-EWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDS 118 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT-EEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCC
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCC-eEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccce
Confidence 3457777777773 1 12667777643 33222222111111122222 56667777632 36
Q ss_pred EEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeC-C-----CcEEEEECCCCeEEEeecCccCceEEEEEeeCCC
Q 009569 341 IRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMT-D-----KSICLWDLDGRELESWKGQKTLRISDMAITDDGK 414 (532)
Q Consensus 341 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~ 414 (532)
+.+||..+.+-...-..........+...+++.++.|+. + ..+.+||+.+..-..............+..-+++
T Consensus 119 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 198 (315)
T 4asc_A 119 VMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGR 198 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTE
T ss_pred EEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCE
Confidence 899999887643322111111111122246777777775 2 4689999987765544332222222222233677
Q ss_pred EEEEEECCC-----eEEEEECCCCc-eeeeecC--CceeEEEEcCCCCEEEEEecCC--------------eEEEEecCC
Q 009569 415 RIISICREA-----AILLLDREANF-ERWIEEE--EVITSFSLSKDNKYLLVNLINQ--------------EIHLWSIES 472 (532)
Q Consensus 415 ~l~~~~~dg-----~I~iwd~~~~~-~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg--------------~i~iwd~~~ 472 (532)
.++.|+.++ .+.+||+.+.. ....... ..-.+++. -++++++.|+.++ .+.+||+.+
T Consensus 199 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 277 (315)
T 4asc_A 199 IIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEE 277 (315)
T ss_dssp EEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT
T ss_pred EEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEecCCC
Confidence 777777554 58899998877 2222111 11112222 2567777776532 367888776
Q ss_pred C
Q 009569 473 D 473 (532)
Q Consensus 473 ~ 473 (532)
.
T Consensus 278 ~ 278 (315)
T 4asc_A 278 K 278 (315)
T ss_dssp T
T ss_pred C
Confidence 5
No 325
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.90 E-value=0.032 Score=49.33 Aligned_cols=173 Identities=8% Similarity=-0.056 Sum_probs=95.9
Q ss_pred CEEEEeeCCCcEEEEECCCCc------EEEEeec-cCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCc--
Q 009569 330 HQLLTCGQEEAIRRWDVNSGE------CLHVYEK-TGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQK-- 400 (532)
Q Consensus 330 ~~l~s~~~dg~i~iwd~~~~~------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-- 400 (532)
..|++...| +++.=....+. ....+-. .=..+..++|+|+|.+.++ .+|.++-.+..+..-..+....
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence 345555555 55554444333 1122211 1236779999999887666 6787777776442212222211
Q ss_pred -----cCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-e------eeeec--CCceeEEEEcCCCCEEEEEecCCeEE
Q 009569 401 -----TLRISDMAITDDGKRIISICREAAILLLDREANF-E------RWIEE--EEVITSFSLSKDNKYLLVNLINQEIH 466 (532)
Q Consensus 401 -----~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~------~~~~~--~~~i~~~~~sp~~~~l~~~~~dg~i~ 466 (532)
-....++.|.|+|.+.++ .||.|+-++..+.. . ..+.. =..+..+.+.|+|.+.++. |+.++
T Consensus 82 IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 82 IGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp EECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred ecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 012478999999988777 66999888864432 1 12211 1467999999999887777 78755
Q ss_pred EEecCCCCc----ceeEEec-cccceEEEEEccCCCCCcEEEEEeCCCcEEE
Q 009569 467 LWSIESDPK----LVSRYKG-HKRARFVIRSCFGGFEQAFIASGSEDSQVNI 513 (532)
Q Consensus 467 iwd~~~~~~----~~~~~~~-~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~i 513 (532)
-+...+... ...+..+ ..-.++.+ +.| .+++.+.+.. +|.++-
T Consensus 158 r~~~P~~~~~~wl~~~~~~g~~g~~~yr~-l~f-~~~G~l~~v~--~g~~Y~ 205 (236)
T 1tl2_A 158 KALPPVSNQDNWLARATKIGQGGWDTFKF-LFF-SSVGTLFGVQ--GGKFYE 205 (236)
T ss_dssp EECCCSSTTCCHHHHCEEEESSSGGGEEE-EEE-CTTSCEEEEE--TTEEEE
T ss_pred ecCCCCCCCcccccccceeccCCcceEEE-EEE-CCCCcEEEEe--CCeEEe
Confidence 443332200 0112222 11122222 334 8888766655 775543
No 326
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.89 E-value=0.3 Score=45.95 Aligned_cols=230 Identities=11% Similarity=0.148 Sum_probs=147.4
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCC-CcEEEEe
Q 009569 277 FLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNS-GECLHVY 355 (532)
Q Consensus 277 ~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~ 355 (532)
+.-.+|..+.+|.-. ..++.|+|+++.. .+..+. ....|..-.|-.+.. |+-.+ +..|+-|++.. ..+.+.|
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~---klks~~-~~e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~kvF 143 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKS---KMKAHT-MTDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMF 143 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTE---EEEEEE-CSSCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCEEEE
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhh---hhccee-cCCccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCceee
Confidence 445688888888765 6789999998653 333333 245788888875543 33333 45899999974 3566666
Q ss_pred ecc----CCceEEEEEeeCCCeEEEEe-------CCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCC-----EEEEE
Q 009569 356 EKT----GVGLISCGWFLDGGGIFAGM-------TDKSICLWDLDGRELESWKGQKTLRISDMAITDDGK-----RIISI 419 (532)
Q Consensus 356 ~~~----~~~i~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-----~l~~~ 419 (532)
..| ...|..-..+++.++++..+ -.|.+.+|..+.+......++.. ... .+-.+|+ .++.+
T Consensus 144 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa-~F~--~~~~~g~~~~~~lf~fa 220 (365)
T 2xzh_A 144 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAA-SFA--QFKMEGNAEESTLFCFA 220 (365)
T ss_dssp ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEE-EEE--EECCTTCSSCEEEEEEE
T ss_pred ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeee-eeE--EEecCCCCCCceEEEEE
Confidence 654 45677777788888876643 23678899988765544444321 211 2222221 33333
Q ss_pred EC---CCeEEEEECCCC---cee--------eeec---CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEec
Q 009569 420 CR---EAAILLLDREAN---FER--------WIEE---EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKG 482 (532)
Q Consensus 420 ~~---dg~I~iwd~~~~---~~~--------~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 482 (532)
.. .+.+++.++... ... +... ..-..++..|+....++.-+.-|.|++||+.++ .++..-+-
T Consensus 221 ~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTg-t~i~~nrI 299 (365)
T 2xzh_A 221 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG-TCIYMNRI 299 (365)
T ss_dssp EEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC-CEEEEEEC
T ss_pred EecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccC-cEEEEecc
Confidence 32 268999998543 111 1111 233557888888889999999999999999999 77777666
Q ss_pred cccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 483 HKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 483 ~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
....+++. +. +.+..=+++....|.|.--.++...
T Consensus 300 S~d~iF~t--a~-~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 300 SGETIFVT--AP-HEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp CSSCEEEE--EE-EGGGTEEEEEETTCEEEEEEECTTT
T ss_pred CCCceEEe--cc-cCCCCcEEEEcCCCEEEEEEECccc
Confidence 66666553 22 2233345566689998888877654
No 327
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.84 E-value=0.41 Score=46.88 Aligned_cols=232 Identities=10% Similarity=0.144 Sum_probs=147.6
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCC-CcEEEEe
Q 009569 277 FLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNS-GECLHVY 355 (532)
Q Consensus 277 ~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~ 355 (532)
+.-.+|..+.||.-. ..++.|+|+++.. .+..+.- ...|..-.|-.+. .|+-.+ +..|+-|++.. ..++..|
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~---klks~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvF 142 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKS---KMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMF 142 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTE---EEEEEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhh---hhcceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhhe
Confidence 455788888887664 6799999998653 3333332 3456677776544 333333 45899999964 3566666
Q ss_pred ecc----CCceEEEEEeeCCCeEEEEe-------CCCcEEEEECCCCeEEEeecCccCceEEEEEeeC---CCEEEEEEC
Q 009569 356 EKT----GVGLISCGWFLDGGGIFAGM-------TDKSICLWDLDGRELESWKGQKTLRISDMAITDD---GKRIISICR 421 (532)
Q Consensus 356 ~~~----~~~i~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~ 421 (532)
..| ...|..-..+++.++++..+ -.|.+.+|..+.+....+.++.. ....+.+..+ ...+..+..
T Consensus 143 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa-~F~~~~~~g~~~~~~lf~fa~r 221 (494)
T 1bpo_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAA-SFAQFKMEGNAEESTLFCFAVR 221 (494)
T ss_dssp ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEE-EEEEEECTTCSSEEEEEEEEEC
T ss_pred ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeee-eeEEEecCCCCCCceEEEEEEe
Confidence 654 45677777788888877543 24678899987665544444322 2222222111 123444443
Q ss_pred ---CCeEEEEECCCC---c----e----eeeec---CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccc
Q 009569 422 ---EAAILLLDREAN---F----E----RWIEE---EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHK 484 (532)
Q Consensus 422 ---dg~I~iwd~~~~---~----~----~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 484 (532)
.+.++|.++... . . .+... ..-..++..|+....++.-+.-|.|++||+.++ .++..-+-..
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTg-t~i~~nrIs~ 300 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG-TCIYMNRISG 300 (494)
T ss_dssp STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC-CEEEEEECCS
T ss_pred cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccc-eeeeeecccC
Confidence 378999998654 1 1 11111 233567889998889999999999999999999 7777766666
Q ss_pred cceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 485 RARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 485 ~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
..+++ .+. .....=+++....|.|.--.++...
T Consensus 301 ~~iF~--t~~-~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 301 ETIFV--TAP-HEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp SCEEE--EEE-ETTTTEEEEEETTCEEEEEEECTTT
T ss_pred CceEE--ecc-cCCCCcEEEEccCceEEEEEEcccc
Confidence 66655 333 3333345566689998888877654
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.84 E-value=0.54 Score=52.97 Aligned_cols=174 Identities=10% Similarity=0.061 Sum_probs=106.7
Q ss_pred cEEEEECCCCcEEEEeecc-CCceEEEEEee----CCCeEEEEe----------CCCcEEEEECCCCeEEEeec-CccCc
Q 009569 340 AIRRWDVNSGECLHVYEKT-GVGLISCGWFL----DGGGIFAGM----------TDKSICLWDLDGRELESWKG-QKTLR 403 (532)
Q Consensus 340 ~i~iwd~~~~~~~~~~~~~-~~~i~~~~~~~----~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~-~~~~~ 403 (532)
.|++.|..+.+.+..+.-. ...+.+++.-. ...++++|+ ..|.|++|++.++++..... ...+.
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 4778888777777666533 33455554322 246788876 35789999987655443322 22346
Q ss_pred eEEEEEeeCCCEEEEEECCCeEEEEECCCCc-eee-eecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEe
Q 009569 404 ISDMAITDDGKRIISICREAAILLLDREANF-ERW-IEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYK 481 (532)
Q Consensus 404 v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-~~~-~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 481 (532)
|++++-- +| +|+++ ....|++|++...+ ... ..+-..|..+.....+.++++|+.-..|.++..+.....+..+.
T Consensus 888 v~al~~~-~g-~Lla~-ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a 964 (1158)
T 3ei3_A 888 VYSMVEF-NG-KLLAS-INSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIA 964 (1158)
T ss_dssp EEEEEEE-TT-EEEEE-ETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEE
T ss_pred CEEEeee-CC-EEEEE-cCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEE
Confidence 8777644 34 45554 35789999998654 221 11111233333434578999998888777766544334455555
Q ss_pred ccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 482 GHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 482 ~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
.+..+.++.++.|.. ...++.+..+|.+.+.....
T Consensus 965 ~D~~~~~vta~~~ld--~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 965 RDFNPNWMSAVEILD--DDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp ECCSCBCEEEEEEEE--TTEEEEEETTSEEEEEEECT
T ss_pred eecccccEEEEEEEc--cCcEEEEcCCCcEEEEecCC
Confidence 555566666677643 34677789999999988765
No 329
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.81 E-value=0.04 Score=52.18 Aligned_cols=185 Identities=12% Similarity=0.067 Sum_probs=99.2
Q ss_pred CCCEEEEEeC----C-----CeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC-----CcEEEEECCC
Q 009569 283 DGKYLASSSK----D-----QSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE-----EAIRRWDVNS 348 (532)
Q Consensus 283 ~g~~las~s~----d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~ 348 (532)
++.+++.|+. + ..+.+||..+. .+..+..+.........+.+ +++.++.|+.+ ..+.+||..+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN-QWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTT-EEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCC-eEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCC
Confidence 6667777765 2 35778887753 33333222222222223333 56777777643 3688999987
Q ss_pred CcEEEEeecc--CCceEEEEEeeCCCeEEEEeCC-----CcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEEC
Q 009569 349 GECLHVYEKT--GVGLISCGWFLDGGGIFAGMTD-----KSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICR 421 (532)
Q Consensus 349 ~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 421 (532)
.+....-... ......+. -++..++.|+.+ ..+.+||+.+..-..............+..-++++++.|+.
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 224 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAV--LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGY 224 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CeEeECCCCCccccceEEEE--ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCC
Confidence 7644321111 11112222 267777777654 46899999876655443322211111112226677777765
Q ss_pred C-----CeEEEEECCCCc-eeeeecCC--ceeEEEEcCCCCEEEEEecC-----CeEEEEecCCC
Q 009569 422 E-----AAILLLDREANF-ERWIEEEE--VITSFSLSKDNKYLLVNLIN-----QEIHLWSIESD 473 (532)
Q Consensus 422 d-----g~I~iwd~~~~~-~~~~~~~~--~i~~~~~sp~~~~l~~~~~d-----g~i~iwd~~~~ 473 (532)
+ ..+.+||+.+.. ........ .-.+++.. ++++++.|+.+ ..+.+||+.+.
T Consensus 225 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 225 DGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 4 569999998877 22211111 11122222 56777777654 35788888765
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.73 E-value=0.11 Score=49.35 Aligned_cols=190 Identities=11% Similarity=0.015 Sum_probs=97.3
Q ss_pred EccCCCEEEEEeC----CC-------eEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCC-------CcE
Q 009569 280 FSHDGKYLASSSK----DQ-------SAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQE-------EAI 341 (532)
Q Consensus 280 ~s~~g~~las~s~----dg-------~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-------g~i 341 (532)
...++..++.|+. ++ .+.+||..+. .+..+..+.........+.+ ++..++.|+.+ ..+
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS-EWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTT-EEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCC-cEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceE
Confidence 3457777777773 12 1667777643 33322222221122222233 56677777654 258
Q ss_pred EEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeC------CCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCE
Q 009569 342 RRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMT------DKSICLWDLDGRELESWKGQKTLRISDMAITDDGKR 415 (532)
Q Consensus 342 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 415 (532)
.+||..+.+-...-..........+...+++.++.|+. -..+.+||+.+..-..............+..-+++.
T Consensus 130 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 209 (318)
T 2woz_A 130 LCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKI 209 (318)
T ss_dssp EEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred EEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEE
Confidence 88999877654322111111111122246777777764 245899999887655443322211111122235677
Q ss_pred EEEEECC-----CeEEEEECCCCc-eeeeecCC--ceeEEEEcCCCCEEEEEecC--------------CeEEEEecCCC
Q 009569 416 IISICRE-----AAILLLDREANF-ERWIEEEE--VITSFSLSKDNKYLLVNLIN--------------QEIHLWSIESD 473 (532)
Q Consensus 416 l~~~~~d-----g~I~iwd~~~~~-~~~~~~~~--~i~~~~~sp~~~~l~~~~~d--------------g~i~iwd~~~~ 473 (532)
++.|+.+ ..+.+||+.+.+ ........ .-.+++. .++++++.|+.+ ..+.+||+.+.
T Consensus 210 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 210 VIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp EEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred EEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 7777643 357889998876 22211111 1112222 256777777653 35778887765
No 331
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.73 E-value=0.12 Score=50.66 Aligned_cols=144 Identities=13% Similarity=0.148 Sum_probs=90.7
Q ss_pred CCCeEEEEeCCCcEEEEECC-CCeEEEeecC---ccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc---e-------
Q 009569 370 DGGGIFAGMTDKSICLWDLD-GRELESWKGQ---KTLRISDMAITDDGKRIISICREAAILLLDREANF---E------- 435 (532)
Q Consensus 370 ~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~---~------- 435 (532)
+|..++++- ++.|+.-++. ....+.+... .-..|..+..+|+|++++..+ +..|.|..+..+. .
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 455555543 3667777765 3323333322 122578899999999998874 5588888877322 1
Q ss_pred ----eee-e-----cCCceeEEEEcCC---CCEEEEEecCCeEEEEecCCC-CcceeEEecc-------ccceEEEEEcc
Q 009569 436 ----RWI-E-----EEEVITSFSLSKD---NKYLLVNLINQEIHLWSIESD-PKLVSRYKGH-------KRARFVIRSCF 494 (532)
Q Consensus 436 ----~~~-~-----~~~~i~~~~~sp~---~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~-------~~~~~~i~~~~ 494 (532)
.+. + ...+|..+.|+|- +..|++-..|+.|++||+... .++. .+... .....+..+||
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 111 1 2467999999994 468999999999999999753 1222 33211 11133456788
Q ss_pred CCCCCcEEEEEe--CCCcEEEEeCC
Q 009569 495 GGFEQAFIASGS--EDSQVNIFLSF 517 (532)
Q Consensus 495 ~s~d~~~l~sgs--~dg~i~iw~~~ 517 (532)
+.++-.|+..+ +.|.||-.-.-
T Consensus 188 -g~~~lTLYvl~~t~~GDIYAlcP~ 211 (452)
T 3pbp_A 188 -SKDGLTLYCLNTTEGGDIFAFYPF 211 (452)
T ss_dssp -CTTSSCEEEEECTTSCEEEEESSC
T ss_pred -cCCCcEEEEEecCCCCCEEEECCC
Confidence 66777777755 88888876543
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.70 E-value=0.18 Score=50.92 Aligned_cols=227 Identities=13% Similarity=0.114 Sum_probs=137.7
Q ss_pred EEEEeCCCeEEEEEeecCCeeEEEEEeecC----------------------CCCeE--EEEeCC---CCCEEEEeeC-C
Q 009569 287 LASSSKDQSAIIWEVKEDGQVSLKHRLSGH----------------------RKPVF--TVSWSP---NDHQLLTCGQ-E 338 (532)
Q Consensus 287 las~s~dg~i~iwd~~~~~~~~~~~~~~~h----------------------~~~v~--~l~~s~---~~~~l~s~~~-d 338 (532)
+.+|+..|.|+|+-+.+...+..+-.|... .+... .+++.. ||++|+.-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 568888999999999876444333222110 01111 122221 5677877664 5
Q ss_pred CcEEEEECCCCcEEEEeecc-CCceEEEEEe--eCCCeEEEEeC-------CCcE---------EE---EECCCCeEEEe
Q 009569 339 EAIRRWDVNSGECLHVYEKT-GVGLISCGWF--LDGGGIFAGMT-------DKSI---------CL---WDLDGRELESW 396 (532)
Q Consensus 339 g~i~iwd~~~~~~~~~~~~~-~~~i~~~~~~--~~~~~l~~~~~-------dg~i---------~i---wd~~~~~~~~~ 396 (532)
..|-..+++..++-.+++.. ...+..++|- |+..++++++. ||.. .+ .|..+.++. |
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~-~ 231 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMA-F 231 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEE-E
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEE-E
Confidence 67888999999888777644 4567788876 67788887763 3331 11 122222111 1
Q ss_pred ecCccCceEEEEEeeCCCEEEEEECC--------------------------------------C--eEEEEECCC----
Q 009569 397 KGQKTLRISDMAITDDGKRIISICRE--------------------------------------A--AILLLDREA---- 432 (532)
Q Consensus 397 ~~~~~~~v~~~~~s~~~~~l~~~~~d--------------------------------------g--~I~iwd~~~---- 432 (532)
...-.+....+...+++++.++.+.+ + .|.+.|.+.
T Consensus 232 Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~ 311 (638)
T 3sbq_A 232 QVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGK 311 (638)
T ss_dssp EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTB
T ss_pred EEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccccc
Confidence 10001133445567788888877754 2 466666655
Q ss_pred Cc--eeeeecCCceeEEEEcCCCCEEEEEec-CCeEEEEecCCCC-----cc-------eeEEeccccceEEEEEccCCC
Q 009569 433 NF--ERWIEEEEVITSFSLSKDNKYLLVNLI-NQEIHLWSIESDP-----KL-------VSRYKGHKRARFVIRSCFGGF 497 (532)
Q Consensus 433 ~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~-dg~i~iwd~~~~~-----~~-------~~~~~~~~~~~~~i~~~~~s~ 497 (532)
.. ..++........+.++|||+++++++. +.++.++|+.... ++ +.....-.. .+...| .+
T Consensus 312 ~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG---PlHt~F-d~ 387 (638)
T 3sbq_A 312 DSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG---PLHTTF-DG 387 (638)
T ss_dssp CCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC---EEEEEE-CS
T ss_pred CCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc---ccEEEE-CC
Confidence 22 444555566778999999999998765 6789999987421 11 122222222 366777 88
Q ss_pred CCcEEEEEeCCCcEEEEeCCC
Q 009569 498 EQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 498 d~~~l~sgs~dg~i~iw~~~~ 518 (532)
+|.-..|.--|..|.-|++..
T Consensus 388 ~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 388 RGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SSEEEEEETTTTEEEEEEHHH
T ss_pred CCceEeeeeecceEEEEeccH
Confidence 896556666899999999865
No 333
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.65 E-value=0.15 Score=49.83 Aligned_cols=129 Identities=13% Similarity=0.074 Sum_probs=85.5
Q ss_pred CcEEEEECCCCcEEEEeecc----CCceEEEEEeeCCCeEEEEeCCCcEEEEECCCC-------------eEEEeecC--
Q 009569 339 EAIRRWDVNSGECLHVYEKT----GVGLISCGWFLDGGGIFAGMTDKSICLWDLDGR-------------ELESWKGQ-- 399 (532)
Q Consensus 339 g~i~iwd~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-------------~~~~~~~~-- 399 (532)
+.||.-++..+...+.+... -..+..+..+|+|++++..+. ..|.|..+..+ ....+.-.
T Consensus 41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 55666666543333444332 225778999999999988764 57888887521 11222221
Q ss_pred ---ccCceEEEEEeeC---CCEEEEEECCCeEEEEECCCCc---eee------ee---cCCceeEEEEcCCCCEEEEEe-
Q 009569 400 ---KTLRISDMAITDD---GKRIISICREAAILLLDREANF---ERW------IE---EEEVITSFSLSKDNKYLLVNL- 460 (532)
Q Consensus 400 ---~~~~v~~~~~s~~---~~~l~~~~~dg~I~iwd~~~~~---~~~------~~---~~~~i~~~~~sp~~~~l~~~~- 460 (532)
...+|..+.|+|- +..|++-..|+.|++||+.... ..+ ++ ....|.+++|.+++-.|.+.+
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~ 199 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNT 199 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEEC
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEec
Confidence 1347999999994 5689999999999999998632 101 11 125688999999887777755
Q ss_pred -cCCeEEEE
Q 009569 461 -INQEIHLW 468 (532)
Q Consensus 461 -~dg~i~iw 468 (532)
..|.|+-.
T Consensus 200 t~~GDIYAl 208 (452)
T 3pbp_A 200 TEGGDIFAF 208 (452)
T ss_dssp TTSCEEEEE
T ss_pred CCCCCEEEE
Confidence 77887654
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.042 Score=52.60 Aligned_cols=184 Identities=8% Similarity=0.027 Sum_probs=95.2
Q ss_pred CEEEEEeCCCeEEEEEeecCCeeEEEEEeecC-CCCeEEEEe--CC-CCCEEEEe-eCCCcEEEEECCCCcEEEEeecc-
Q 009569 285 KYLASSSKDQSAIIWEVKEDGQVSLKHRLSGH-RKPVFTVSW--SP-NDHQLLTC-GQEEAIRRWDVNSGECLHVYEKT- 358 (532)
Q Consensus 285 ~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~l~~--s~-~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~- 358 (532)
..++.++.||.|.-+|..+| +....+... ..++....- .+ ++..++.. +.||.|..++..+|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG---~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNG---HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTT---EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeCCCeEEEEECCCC---cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 36778889999999998876 344444432 122222110 01 23333343 68999999999988655444321
Q ss_pred ---CCceEE---EEE-----eeCCCeEEEEeCCCcEEEEECCCCeEEEeecCccC-c------eEEEEEe-----eCCCE
Q 009569 359 ---GVGLIS---CGW-----FLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTL-R------ISDMAIT-----DDGKR 415 (532)
Q Consensus 359 ---~~~i~~---~~~-----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~------v~~~~~s-----~~~~~ 415 (532)
..++.. ... ...+..+++|+.+|.+...|+++++.......... . ..|.... ..+..
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCe
Confidence 111211 000 01456788999999999999988776554433210 0 0011110 12356
Q ss_pred EEEEECCCeEEEEECCCCc---eeeeec-CCce-----eEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 416 IISICREAAILLLDREANF---ERWIEE-EEVI-----TSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 416 l~~~~~dg~I~iwd~~~~~---~~~~~~-~~~i-----~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
++.+..+..+.+.+ +++. ..+... ...+ .+...+.|+.+ ++++.||.|.-+|..++
T Consensus 168 v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G 232 (339)
T 2be1_A 168 IVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFR 232 (339)
T ss_dssp EEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTC
T ss_pred EEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCC
Confidence 77777776777666 3332 000000 0000 00011234555 44666888888887766
No 335
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.59 E-value=0.031 Score=49.46 Aligned_cols=140 Identities=6% Similarity=-0.094 Sum_probs=83.2
Q ss_pred CCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEE------EEeec-cCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC
Q 009569 318 KPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECL------HVYEK-TGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG 390 (532)
Q Consensus 318 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~------~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 390 (532)
..+..++|+|+|.+.++ .+|.+.-.+..+.... ..+-. .-....++.|.|+|.+.++ .||.|+-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 36779999999886665 7777777776542211 11110 1111467889999988777 569998887632
Q ss_pred CeEEEe-------ecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc-------eeeee--cCCceeEEEEcCCCC
Q 009569 391 RELESW-------KGQKTLRISDMAITDDGKRIISICREAAILLLDREANF-------ERWIE--EEEVITSFSLSKDNK 454 (532)
Q Consensus 391 ~~~~~~-------~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~-------~~~~~--~~~~i~~~~~sp~~~ 454 (532)
..-..+ -...-..+..+.+.|+|.+.++. |+.++-....+.. ..... .-....-+.|++++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 111111 11111268999999999877776 7776544333221 12222 112344566888888
Q ss_pred EEEEEecCCeE
Q 009569 455 YLLVNLINQEI 465 (532)
Q Consensus 455 ~l~~~~~dg~i 465 (532)
+.++. +|.+
T Consensus 195 l~~v~--~g~~ 203 (236)
T 1tl2_A 195 LFGVQ--GGKF 203 (236)
T ss_dssp EEEEE--TTEE
T ss_pred EEEEe--CCeE
Confidence 77776 6644
No 336
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.55 E-value=0.24 Score=49.70 Aligned_cols=103 Identities=19% Similarity=0.229 Sum_probs=62.7
Q ss_pred CCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEE--Eeec------cCCceEEEEEeeC---CCeEEEEeC-------
Q 009569 318 KPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLH--VYEK------TGVGLISCGWFLD---GGGIFAGMT------- 379 (532)
Q Consensus 318 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~------~~~~i~~~~~~~~---~~~l~~~~~------- 379 (532)
.....++|.|+|+++++-...+.|++++..+++... .+.. ....+..++|+|+ +..|+++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 356799999999877765444578888876565432 2211 2356779999995 555555442
Q ss_pred ------CCcEEEEECCC--Ce------EEE-eecCccCceEEEEEeeCCCEEEEEE
Q 009569 380 ------DKSICLWDLDG--RE------LES-WKGQKTLRISDMAITDDGKRIISIC 420 (532)
Q Consensus 380 ------dg~i~iwd~~~--~~------~~~-~~~~~~~~v~~~~~s~~~~~l~~~~ 420 (532)
...|.-|+... .. +.. +..........|+|.|||.++++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 23566666532 11 111 1111123578999999998777654
No 337
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.53 E-value=0.68 Score=45.38 Aligned_cols=218 Identities=7% Similarity=0.171 Sum_probs=133.1
Q ss_pred CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCC
Q 009569 293 DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGG 372 (532)
Q Consensus 293 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~ 372 (532)
+..|.|.|+.++... ..+... .-+.-.+|..+.++.=. ..++.|+|+++.+.+..+.... .|.--.|-.+.
T Consensus 47 ~~~vvIiDl~~~~~~-~rrpi~-----AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~- 117 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNP-IRRPIS-----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN- 117 (494)
T ss_dssp CCEEEEEETTSTTSC-EEEECC-----CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETT-
T ss_pred CCeEEEEECCCCCcc-eecccc-----cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCC-
Confidence 447888888865543 112221 12345677777666654 6799999999999888887544 46667777554
Q ss_pred eEEEEeCCCcEEEEECCC--CeEEEeecCc---cCceEEEEEeeCCCEEEEEE-------CCCeEEEEECCCCc-eeeee
Q 009569 373 GIFAGMTDKSICLWDLDG--RELESWKGQK---TLRISDMAITDDGKRIISIC-------REAAILLLDREANF-ERWIE 439 (532)
Q Consensus 373 ~l~~~~~dg~i~iwd~~~--~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~-------~dg~I~iwd~~~~~-~~~~~ 439 (532)
.|+..+ +..|+-|++.+ .....+..+. ...|..-..+++.++++..+ -.|.+.+|..+.+. ..+.+
T Consensus 118 ~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieG 196 (494)
T 1bpo_A 118 TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 196 (494)
T ss_dssp EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECC
T ss_pred eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchhee
Confidence 333332 56899999964 3333332221 23688888899999877554 23678899998877 55556
Q ss_pred cCCceeEEEEcCCC---CEEEEEec---CCeEEEEecCCCC---cce-----eE-EeccccceEEEEEccCCCCCcEEEE
Q 009569 440 EEEVITSFSLSKDN---KYLLVNLI---NQEIHLWSIESDP---KLV-----SR-YKGHKRARFVIRSCFGGFEQAFIAS 504 (532)
Q Consensus 440 ~~~~i~~~~~sp~~---~~l~~~~~---dg~i~iwd~~~~~---~~~-----~~-~~~~~~~~~~i~~~~~s~d~~~l~s 504 (532)
|......+.+.-+. ..++.+.. .+.++|.++.... ... .. +......-+.+.... ++.-..++.
T Consensus 197 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqv-s~kygviyv 275 (494)
T 1bpo_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI-SEKHDVVFL 275 (494)
T ss_dssp SEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEE-ETTTTEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEe-cccCCEEEE
Confidence 65555444443221 23333332 2789999985430 111 00 111111112233333 666678888
Q ss_pred EeCCCcEEEEeCCCCCc
Q 009569 505 GSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 505 gs~dg~i~iw~~~~~~~ 521 (532)
.+.-|.|++||+.++..
T Consensus 276 iTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 276 ITKYGYIHLYDLETGTC 292 (494)
T ss_dssp EETTSEEEEEETTTCCE
T ss_pred EecCceEEEEeccccee
Confidence 99999999999999864
No 338
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.50 E-value=0.58 Score=44.07 Aligned_cols=218 Identities=7% Similarity=0.152 Sum_probs=130.3
Q ss_pred CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCC
Q 009569 293 DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGG 372 (532)
Q Consensus 293 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~ 372 (532)
+..|.|.|+..+... ..+... - -+.-.+|..+.+|.-. ..++.++|+++.+.+..+... ..|.--.|-.+.
T Consensus 48 ~~~VvIiDl~n~~~~-~Rrpi~-A----dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~- 118 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNP-IRRPIS-A----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN- 118 (365)
T ss_dssp EEEEEEEETTSTTSC-EEEECC-C----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSS-
T ss_pred CCEEEEEECCCCCCc-cccccc-c----ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCC-
Confidence 346888888765443 112211 1 1334588877776655 678999999999998888754 457677777544
Q ss_pred eEEEEeCCCcEEEEECCC--CeEEEeecCc---cCceEEEEEeeCCCEEEEEEC-------CCeEEEEECCCCc-eeeee
Q 009569 373 GIFAGMTDKSICLWDLDG--RELESWKGQK---TLRISDMAITDDGKRIISICR-------EAAILLLDREANF-ERWIE 439 (532)
Q Consensus 373 ~l~~~~~dg~i~iwd~~~--~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~-------dg~I~iwd~~~~~-~~~~~ 439 (532)
.|+..+ +..|+.|++.+ .....+..+. ...|..-..+++.++++..+- .|.+.+|..+.+. ..+.+
T Consensus 119 ~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieG 197 (365)
T 2xzh_A 119 TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 197 (365)
T ss_dssp EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECC
T ss_pred eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeee
Confidence 443333 46899999974 2332222221 236788888899998766542 3678899988877 55555
Q ss_pred cCCceeEEEEcCC---CCEEEEEec---CCeEEEEecCCC--Cc-ce-----eE-EeccccceEEEEEccCCCCCcEEEE
Q 009569 440 EEEVITSFSLSKD---NKYLLVNLI---NQEIHLWSIESD--PK-LV-----SR-YKGHKRARFVIRSCFGGFEQAFIAS 504 (532)
Q Consensus 440 ~~~~i~~~~~sp~---~~~l~~~~~---dg~i~iwd~~~~--~~-~~-----~~-~~~~~~~~~~i~~~~~s~d~~~l~s 504 (532)
|......+.+.-+ ...++.+.. .+.++|.++... +. .. .. +......-+.+.... ++.-..++.
T Consensus 198 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqv-s~kygviyv 276 (365)
T 2xzh_A 198 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI-SEKHDVVFL 276 (365)
T ss_dssp SEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEE-ETTTTEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEe-cccCCEEEE
Confidence 5544433333211 123333322 258999998543 01 11 11 111111122233333 555668888
Q ss_pred EeCCCcEEEEeCCCCCc
Q 009569 505 GSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 505 gs~dg~i~iw~~~~~~~ 521 (532)
.+.-|.|++||++++..
T Consensus 277 iTK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 277 ITKYGYIHLYDLETGTC 293 (365)
T ss_dssp EETTSEEEEEETTTCCE
T ss_pred EeCCcEEEEEEcccCcE
Confidence 99999999999999864
No 339
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.42 E-value=0.36 Score=46.31 Aligned_cols=145 Identities=12% Similarity=0.110 Sum_probs=87.3
Q ss_pred cCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEE--e----eccCCceEEEEEeeC---CCeEEEE---eCCCc
Q 009569 315 GHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHV--Y----EKTGVGLISCGWFLD---GGGIFAG---MTDKS 382 (532)
Q Consensus 315 ~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~----~~~~~~i~~~~~~~~---~~~l~~~---~~dg~ 382 (532)
..-...+.++|.|||..+++--..|.|++++..+++.... + .........++++|+ +..|++. ..++.
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 3345578999999998777755589999998766654221 1 123456889999985 3445443 23456
Q ss_pred EEEEECCCC----------e-EEE-eecCccCceEEEEEeeCCCEEEEEEC-------------CCeEEEEECCCC----
Q 009569 383 ICLWDLDGR----------E-LES-WKGQKTLRISDMAITDDGKRIISICR-------------EAAILLLDREAN---- 433 (532)
Q Consensus 383 i~iwd~~~~----------~-~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~-------------dg~I~iwd~~~~---- 433 (532)
|.-|.+... + +.. +..........|+|.|||.++++.+. .|.|.-++....
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 666665431 1 111 11111224567999999987777542 356666676543
Q ss_pred ----c-eeeeecCCceeEEEEcCCCCEEEEE
Q 009569 434 ----F-ERWIEEEEVITSFSLSKDNKYLLVN 459 (532)
Q Consensus 434 ----~-~~~~~~~~~i~~~~~sp~~~~l~~~ 459 (532)
. ..+...-.....++|+|+|.+.++-
T Consensus 189 nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 189 NPFPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp CSSTTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred CCCCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 1 1122122345689999988765543
No 340
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.35 E-value=0.19 Score=50.52 Aligned_cols=146 Identities=12% Similarity=0.109 Sum_probs=84.7
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeec------CCCCeEEEEeCCC---CCEEEEeeC-----
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSG------HRKPVFTVSWSPN---DHQLLTCGQ----- 337 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~------h~~~v~~l~~s~~---~~~l~s~~~----- 337 (532)
-...+.++|.|+|+++++-...+.|++++..++ ....+..+.. .......|+|+|+ +..|+.+..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g-~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESG-SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTC-CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCC-cEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 345789999999997777654457887765433 3333333322 2456779999995 445544432
Q ss_pred --------CCcEEEEECCCC--c---EEEEe---ec-cCCceEEEEEeeCCCeEEEEeC---------------------
Q 009569 338 --------EEAIRRWDVNSG--E---CLHVY---EK-TGVGLISCGWFLDGGGIFAGMT--------------------- 379 (532)
Q Consensus 338 --------dg~i~iwd~~~~--~---~~~~~---~~-~~~~i~~~~~~~~~~~l~~~~~--------------------- 379 (532)
...|..|+...+ . ....+ .. .......+.|.|||.++++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~ 184 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQ 184 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCH
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCcccccccccccccccc
Confidence 235666665332 1 11112 11 1234688999999987776442
Q ss_pred -----------CCcEEEEECCCC-----------eEEEeecCccCceEEEEEeeCCCEEEEE
Q 009569 380 -----------DKSICLWDLDGR-----------ELESWKGQKTLRISDMAITDDGKRIISI 419 (532)
Q Consensus 380 -----------dg~i~iwd~~~~-----------~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 419 (532)
.|.|.-++.++. ....+...+. ....++|+|+|.++++-
T Consensus 185 ~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~R-Np~gla~dp~G~L~~~d 245 (454)
T 1cru_A 185 QELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHR-NPQGLAFTPNGKLLQSE 245 (454)
T ss_dssp HHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCS-EEEEEEECTTSCEEEEE
T ss_pred ccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCC-CcceEEECCCCCEEEEe
Confidence 134555555543 1222322332 57899999988765553
No 341
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.34 E-value=0.79 Score=43.94 Aligned_cols=153 Identities=14% Similarity=0.099 Sum_probs=89.7
Q ss_pred eeEEcccccccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEe----ecCCCCeEEEEeCCC---CCEEEEe-
Q 009569 264 TLQILEAHSDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRL----SGHRKPVFTVSWSPN---DHQLLTC- 335 (532)
Q Consensus 264 ~~~~l~~h~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~----~~h~~~v~~l~~s~~---~~~l~s~- 335 (532)
.+..+-..-...+.++|.|+|.++++-...|.|++++..++ ....+..+ .........|+++|+ +..|+.+
T Consensus 23 ~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g-~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTG-RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTC-CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred eeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCC-cEeeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 34444444567889999999998887765899988875433 22233322 123456789999995 3444432
Q ss_pred --eCCCcEEEEECCCC----------cEE-EEee-ccCCceEEEEEeeCCCeEEEEeC-------------CCcEEEEEC
Q 009569 336 --GQEEAIRRWDVNSG----------ECL-HVYE-KTGVGLISCGWFLDGGGIFAGMT-------------DKSICLWDL 388 (532)
Q Consensus 336 --~~dg~i~iwd~~~~----------~~~-~~~~-~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~iwd~ 388 (532)
..+..|.-|....+ +.+ ..+. ........+.|.|||.++++.+. .|.|.-.+.
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 23456777766542 111 1121 11223456899999987777432 355666666
Q ss_pred CCC--------eEEEeecCccCceEEEEEeeCCCEEEE
Q 009569 389 DGR--------ELESWKGQKTLRISDMAITDDGKRIIS 418 (532)
Q Consensus 389 ~~~--------~~~~~~~~~~~~v~~~~~s~~~~~l~~ 418 (532)
++. ....+...+. ....++|+|+|.++++
T Consensus 182 dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 182 DGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp TSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEE
T ss_pred CCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEE
Confidence 543 1112222222 4678999998775554
No 342
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.14 E-value=0.27 Score=52.41 Aligned_cols=195 Identities=11% Similarity=0.096 Sum_probs=108.1
Q ss_pred CCCCEEEEeeCC----CcEEEEECCCCcEEEEe-e-----ccCC-ceEEEEEee-CCCeEEEEeCC------CcEEEEEC
Q 009569 327 PNDHQLLTCGQE----EAIRRWDVNSGECLHVY-E-----KTGV-GLISCGWFL-DGGGIFAGMTD------KSICLWDL 388 (532)
Q Consensus 327 ~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~-~-----~~~~-~i~~~~~~~-~~~~l~~~~~d------g~i~iwd~ 388 (532)
.++..++.|+.+ ..+.+||..+++....- . .... .-.+++..+ +++.++.|+.+ +.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 356677777653 46889998887654332 1 1111 112333333 67777787743 35889999
Q ss_pred CCCeEEEeecCccCce-EEEEEeeCCCEEEEEECCC--eEEEEECCCCc-eeeee------cCCceeEEEEcCC-CCEEE
Q 009569 389 DGRELESWKGQKTLRI-SDMAITDDGKRIISICREA--AILLLDREANF-ERWIE------EEEVITSFSLSKD-NKYLL 457 (532)
Q Consensus 389 ~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~dg--~I~iwd~~~~~-~~~~~------~~~~i~~~~~sp~-~~~l~ 457 (532)
.+..-........... .+++...+++.++.|+.++ .+.+||..+.. ..... ......++.+..+ ++.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 8865544433222122 2233324788888887654 69999998877 22211 1222334555655 67777
Q ss_pred EEec--C-----CeEEEEecCCCCcc-----eeEEecc-ccceEEEEEccCCCCCcEEEEEeC--------CCcEEEEeC
Q 009569 458 VNLI--N-----QEIHLWSIESDPKL-----VSRYKGH-KRARFVIRSCFGGFEQAFIASGSE--------DSQVNIFLS 516 (532)
Q Consensus 458 ~~~~--d-----g~i~iwd~~~~~~~-----~~~~~~~-~~~~~~i~~~~~s~d~~~l~sgs~--------dg~i~iw~~ 516 (532)
.|+. + +.+.+||+.+. .- -..+... ..+.....++. ..++.+++.|+. ...|.+||+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~-~w~~~~~W~~~~~~p~~~R~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAE-NATEPITVIKKLQHPLFQRYGSQIKY-ITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTT-CSSCCEEEEEEEECGGGCCBSCEEEE-EETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred ECCcCCCCCeeeCcEEEEEccCC-ccccceEEEEcCCCCCCCcccceEEE-eCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 7765 2 46899999876 31 1111111 11111111111 222677777774 346999999
Q ss_pred CCCCcee
Q 009569 517 FSPFAKK 523 (532)
Q Consensus 517 ~~~~~~~ 523 (532)
.+.....
T Consensus 634 ~t~~W~~ 640 (695)
T 2zwa_A 634 LSETLTS 640 (695)
T ss_dssp TTTEEEE
T ss_pred CCCeEEE
Confidence 9876553
No 343
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.98 E-value=2.2 Score=45.76 Aligned_cols=189 Identities=10% Similarity=0.095 Sum_probs=113.5
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcE
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGEC 351 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 351 (532)
...|.++....+| .|..|+.+| +..||..+. .+.. ........|.++.. .++ .|..++.+ -|..+|..+++.
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~-~f~~--~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~ 133 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRAD-RYEQ--PETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL 133 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTT-EECC--CSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCC-EEEC--cccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE
Confidence 3568888877776 455566555 778887754 2211 11112335776654 344 45555555 688899877654
Q ss_pred EEEee----ccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCCeEEEeecCc-----cCceEEEEEeeCCCEEEEEECC
Q 009569 352 LHVYE----KTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQK-----TLRISDMAITDDGKRIISICRE 422 (532)
Q Consensus 352 ~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~d 422 (532)
..... .....|.++....++.. .+|+.+ -+..+|..+.......... ...|.++...+++..|..++.
T Consensus 134 ~~~~~~~~~l~~~~i~~i~~d~~g~l-Wigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~- 210 (758)
T 3ott_A 134 TSFDTRRNGLPNNTIYSIIRTKDNQI-YVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE- 210 (758)
T ss_dssp EEECHHHHCCSCSCEEEEEECTTCCE-EEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-
T ss_pred EEeccCCCCcCCCeEEEEEEcCCCCE-EEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-
Confidence 33211 12345777777666654 445554 5888898776654433211 124888888877776666664
Q ss_pred CeEEEEECCCCce-eee-ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 009569 423 AAILLLDREANFE-RWI-EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESD 473 (532)
Q Consensus 423 g~I~iwd~~~~~~-~~~-~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~ 473 (532)
+-+..+|..+... ... .....|.++...++|.+.+ |+. +-+.+++..+.
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~ 261 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTT 261 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTS
T ss_pred CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCC
Confidence 4688899877652 111 1234588888888776554 443 45888887664
No 344
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.94 E-value=0.084 Score=50.49 Aligned_cols=187 Identities=8% Similarity=-0.075 Sum_probs=102.1
Q ss_pred CEEEEeeCCCcEEEEECCCCcEEEEeecc-CCceEEEEEe--eCCCeEEEE--eCCCcEEEEECCCCeEEEeecCccCce
Q 009569 330 HQLLTCGQEEAIRRWDVNSGECLHVYEKT-GVGLISCGWF--LDGGGIFAG--MTDKSICLWDLDGRELESWKGQKTLRI 404 (532)
Q Consensus 330 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~i~~~~~~--~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~v 404 (532)
..++.++.||.|.-.|..+|+....++.. ..++....-. +.+..++.+ +.||.|+.+|..++... +...-...+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~-~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK-LPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE-EEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE-eeeccccce
Confidence 47888999999999999999999888754 1222221100 112234443 58999999998876433 211100011
Q ss_pred --EEEEEe-----------eCCCEEEEEECCCeEEEEECCCCceeeeecCCce---------eEEEEc-----CCCCEEE
Q 009569 405 --SDMAIT-----------DDGKRIISICREAAILLLDREANFERWIEEEEVI---------TSFSLS-----KDNKYLL 457 (532)
Q Consensus 405 --~~~~~s-----------~~~~~l~~~~~dg~I~iwd~~~~~~~~~~~~~~i---------~~~~~s-----p~~~~l~ 457 (532)
..+... ..+..+++++.+|.+...|..+++.......... .|.... -.+..++
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 001111 1455789999999999999999984333222211 111111 1245677
Q ss_pred EEecCCeEEEEecCCCCcceeEEe-----ccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCCc
Q 009569 458 VNLINQEIHLWSIESDPKLVSRYK-----GHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPFA 521 (532)
Q Consensus 458 ~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~~ 521 (532)
.+..+..+.+.+ +++ + +..+. ..............+.|+.+ +.++.||.|+.+|..+|..
T Consensus 170 ig~~~y~v~~~~-~sG-~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~ 234 (339)
T 2be1_A 170 IGKTIFELGIHS-YDG-A-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIA 234 (339)
T ss_dssp EEEEEEECEECC-TTS-C-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCE
T ss_pred EecceEEEEEEC-CCC-C-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcE
Confidence 777777777766 444 2 21111 11000000000000234666 4478899999999888764
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.68 E-value=0.42 Score=53.94 Aligned_cols=232 Identities=10% Similarity=0.159 Sum_probs=137.1
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCC-CcEEEEe
Q 009569 277 FLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNS-GECLHVY 355 (532)
Q Consensus 277 ~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~ 355 (532)
+.-.+|..+.||.-. ..++.|+|+++..++ ..+. .+.+|..-.|-.+...-++ + +..|.-|++.. ..++..|
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~kl---ks~~-~~e~VvfWkWis~~~l~lV-T-~~aVyHW~~~~~s~P~k~f 142 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKM---KAHT-MTDDVTFWKWISLNTVALV-T-DNAVYHWSMEGESQPVKMF 142 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhh---cccc-cCCCceEEEecCCCeeEEE-c-CCeEEEeccCCCCccHHHH
Confidence 344678777777654 679999999865332 2222 2346777788654433332 2 45899999964 3344444
Q ss_pred ecc----CCceEEEEEeeCCCeEEEEe-------CCCcEEEEECCCCeEEEeecCccCceEEEEEe--eC-CCEEEEEE-
Q 009569 356 EKT----GVGLISCGWFLDGGGIFAGM-------TDKSICLWDLDGRELESWKGQKTLRISDMAIT--DD-GKRIISIC- 420 (532)
Q Consensus 356 ~~~----~~~i~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s--~~-~~~l~~~~- 420 (532)
..| ...|..-..+++.++++..+ -.|.+.+|..+.+....+.++.. ....+... +. ...+..+.
T Consensus 143 dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~-~F~~~~~~~~~~~~~l~~f~~~ 221 (1630)
T 1xi4_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAA-SFAQFKMEGNAEESTLFCFAVR 221 (1630)
T ss_pred hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHh-hhheeccCCCCCCceEEEEEEe
Confidence 444 45677777788888877543 35788899887544333322221 11111111 11 12222222
Q ss_pred --CCCeEEEEECCCC-c--e--------eeeec---CCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccc
Q 009569 421 --REAAILLLDREAN-F--E--------RWIEE---EEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHK 484 (532)
Q Consensus 421 --~dg~I~iwd~~~~-~--~--------~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 484 (532)
..+.++|.++... . . .+... ..-..++..|+....+..-+.-|.|++||+.++ .++..-+-..
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~-~~i~~~ris~ 300 (1630)
T 1xi4_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG-TCIYMNRISG 300 (1630)
T ss_pred cCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccc-hhhhhccccC
Confidence 1368999988553 1 1 11111 222457888888888889999999999999998 6665555555
Q ss_pred cceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCCCC
Q 009569 485 RARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFSPF 520 (532)
Q Consensus 485 ~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~~~ 520 (532)
.++++ .+...+.+. +++....|.|.--.++...
T Consensus 301 ~~iF~--~~~~~~~~g-~~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 301 ETIFV--TAPHEATAG-IIGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred CceEE--eccCCCCCc-eEEEcCCceEEEEEEccch
Confidence 55554 333233343 4455578888777776543
No 346
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.60 E-value=0.24 Score=47.84 Aligned_cols=141 Identities=12% Similarity=0.177 Sum_probs=80.7
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEe-------eccCCceEEEEEeeC---CCeEEEEeC--------C
Q 009569 319 PVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVY-------EKTGVGLISCGWFLD---GGGIFAGMT--------D 380 (532)
Q Consensus 319 ~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------~~~~~~i~~~~~~~~---~~~l~~~~~--------d 380 (532)
....++|.|+|+.|+.+...|.|++++.. +.....+ .........++++|+ +..|+++.. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 46789999999834455678999999853 3321111 112345789999995 455555432 2
Q ss_pred CcEEEEECCCC-----eEEEee---c---CccCceEEEEEeeCCCEEEEEEC-------------CCeEEEEECCCC---
Q 009569 381 KSICLWDLDGR-----ELESWK---G---QKTLRISDMAITDDGKRIISICR-------------EAAILLLDREAN--- 433 (532)
Q Consensus 381 g~i~iwd~~~~-----~~~~~~---~---~~~~~v~~~~~s~~~~~l~~~~~-------------dg~I~iwd~~~~--- 433 (532)
..|..|++... ....+. . ........++|.|||.++++.+. .|.|.-+|....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666766432 111111 1 01113567999999965555433 257888887653
Q ss_pred ----------c-eeeeecCCceeEEEEcCCCCEEEEEe
Q 009569 434 ----------F-ERWIEEEEVITSFSLSKDNKYLLVNL 460 (532)
Q Consensus 434 ----------~-~~~~~~~~~i~~~~~sp~~~~l~~~~ 460 (532)
. ..+...-.....++|+|+...|+++.
T Consensus 178 ~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEE
T ss_pred CCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEe
Confidence 1 12222223477899999433444443
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.49 E-value=0.29 Score=47.18 Aligned_cols=194 Identities=12% Similarity=0.039 Sum_probs=95.6
Q ss_pred CCCEEEEeeCC-CcEEEEECCC--CcEEEEeecc-CCceEEEEEeeCCCeEEEEeC-C---------CcEEEEECCCCeE
Q 009569 328 NDHQLLTCGQE-EAIRRWDVNS--GECLHVYEKT-GVGLISCGWFLDGGGIFAGMT-D---------KSICLWDLDGREL 393 (532)
Q Consensus 328 ~~~~l~s~~~d-g~i~iwd~~~--~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~-d---------g~i~iwd~~~~~~ 393 (532)
++..++.|+.+ ..+.+||..+ .+....-... .......+..-+++.++.|+. + ..+.+||+.+..-
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 45555666543 4688888864 3322211111 111111112226777777765 2 4689999988765
Q ss_pred EEeecCc-cCceEEEEEeeCCCEEEEEECC---------------------------------------CeEEEEECCCC
Q 009569 394 ESWKGQK-TLRISDMAITDDGKRIISICRE---------------------------------------AAILLLDREAN 433 (532)
Q Consensus 394 ~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d---------------------------------------g~I~iwd~~~~ 433 (532)
....... .......+...++++++.|+.+ ..+.+||..+.
T Consensus 99 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 178 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ 178 (357)
T ss_dssp EECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT
T ss_pred EECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC
Confidence 5443322 2122222233677778888754 57999999887
Q ss_pred c-eeeeecC--Cce-eEEEEcCCCCEEEEEec------CCeEEEEec--CCC-CcceeEEeccccceEEEEEccCCCCCc
Q 009569 434 F-ERWIEEE--EVI-TSFSLSKDNKYLLVNLI------NQEIHLWSI--ESD-PKLVSRYKGHKRARFVIRSCFGGFEQA 500 (532)
Q Consensus 434 ~-~~~~~~~--~~i-~~~~~sp~~~~l~~~~~------dg~i~iwd~--~~~-~~~~~~~~~~~~~~~~i~~~~~s~d~~ 500 (532)
. ....... ..- .+++.. ++++++.|+. ...+.+||+ .+. ...+..+...... ....++ ..++.
T Consensus 179 ~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~-~~~~~~--~~~~~ 254 (357)
T 2uvk_A 179 QWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV-AGGFAG--ISNDS 254 (357)
T ss_dssp EEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC-BSCEEE--EETTE
T ss_pred cEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc-ccceEE--EECCE
Confidence 7 2222211 111 233332 5667777653 345777876 332 1111111111110 000011 23567
Q ss_pred EEEEEeCC----------------------CcEEEEeCCCCCceeee
Q 009569 501 FIASGSED----------------------SQVNIFLSFSPFAKKIK 525 (532)
Q Consensus 501 ~l~sgs~d----------------------g~i~iw~~~~~~~~~~~ 525 (532)
+++.|+.+ ..+.+||+.+.....+.
T Consensus 255 iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 255 LIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp EEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred EEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 77777642 25789999987766653
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.30 E-value=1.4 Score=46.77 Aligned_cols=191 Identities=13% Similarity=0.101 Sum_probs=106.0
Q ss_pred cCCCEEEEEeCC----CeEEEEEeecCCeeEEEE-E-----eecCCCCeEEEEeCCCCCEEEEeeCC------CcEEEEE
Q 009569 282 HDGKYLASSSKD----QSAIIWEVKEDGQVSLKH-R-----LSGHRKPVFTVSWSPNDHQLLTCGQE------EAIRRWD 345 (532)
Q Consensus 282 ~~g~~las~s~d----g~i~iwd~~~~~~~~~~~-~-----~~~h~~~v~~l~~s~~~~~l~s~~~d------g~i~iwd 345 (532)
.++..++.|+.+ ..+.+||..++ .+.... . .......-..+.+..++..++.|+.+ ..+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~-~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYD-KIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSS-CEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCC-eEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 466777777753 46888898754 343333 2 11111122333333267777887754 3588999
Q ss_pred CCCCcEEEEeeccCCc-eEEEEEeeCCCeEEEEeCCC--cEEEEECCCCeEEEeecC-----ccCceEEEEEeeC-CCEE
Q 009569 346 VNSGECLHVYEKTGVG-LISCGWFLDGGGIFAGMTDK--SICLWDLDGRELESWKGQ-----KTLRISDMAITDD-GKRI 416 (532)
Q Consensus 346 ~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~s~~-~~~l 416 (532)
..+.+....-...... -.+++...+++.++.|+.++ .+.+||..+..-...... ......++.+..+ ++.+
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 9886543321111111 11223324788888887654 799999988765554421 1112233555555 6677
Q ss_pred EEEEC--C-----CeEEEEECCCCc------eeeeec---C-CceeEEEEcCCCCEEEEEec--------CCeEEEEecC
Q 009569 417 ISICR--E-----AAILLLDREANF------ERWIEE---E-EVITSFSLSKDNKYLLVNLI--------NQEIHLWSIE 471 (532)
Q Consensus 417 ~~~~~--d-----g~I~iwd~~~~~------~~~~~~---~-~~i~~~~~sp~~~~l~~~~~--------dg~i~iwd~~ 471 (532)
+.|+. + ..+.+||+.+.. -..... . ..-.+++...++++++.|+. ...+.+||+.
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 77765 2 458899987765 111111 1 11123333334777777774 3469999988
Q ss_pred CC
Q 009569 472 SD 473 (532)
Q Consensus 472 ~~ 473 (532)
+.
T Consensus 635 t~ 636 (695)
T 2zwa_A 635 SE 636 (695)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 349
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.80 E-value=1.3 Score=50.08 Aligned_cols=217 Identities=7% Similarity=0.134 Sum_probs=125.3
Q ss_pred CCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCC
Q 009569 293 DQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGG 372 (532)
Q Consensus 293 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~ 372 (532)
...|.|.|+.++... .+. .-..-+.-.+|..+.++.-. ..++.|+|+++...+..+.... +|.--.|-.+..
T Consensus 47 ~~~vvIidl~~~~~~--~rr----pi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~~ 118 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNP--IRR----PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNT 118 (1630)
T ss_pred CceEEEEECCCCCCc--ccc----cccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCCe
Confidence 347888888765432 111 11112344577776665544 6799999999988877776544 566667765443
Q ss_pred eEEEEeCCCcEEEEECCCC-eEEEeecCc----cCceEEEEEeeCCCEEEEEE-------CCCeEEEEECCCCc-eeeee
Q 009569 373 GIFAGMTDKSICLWDLDGR-ELESWKGQK----TLRISDMAITDDGKRIISIC-------REAAILLLDREANF-ERWIE 439 (532)
Q Consensus 373 ~l~~~~~dg~i~iwd~~~~-~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~-------~dg~I~iwd~~~~~-~~~~~ 439 (532)
++..+ +..|+.|++.+. .....+..+ ...|..-..+++.++++..+ -.|.+.+|..+.+. ..+.+
T Consensus 119 -l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ieg 196 (1630)
T 1xi4_A 119 -VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 196 (1630)
T ss_pred -eEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhH
Confidence 33322 467999999752 222222211 23688888889999877554 34788899988776 44455
Q ss_pred cCCceeEEEEc--CCCCEEEE-Eec---CCeEEEEecCCC--Cc-ce-----eEE-eccccceEEEEEccCCCCCcEEEE
Q 009569 440 EEEVITSFSLS--KDNKYLLV-NLI---NQEIHLWSIESD--PK-LV-----SRY-KGHKRARFVIRSCFGGFEQAFIAS 504 (532)
Q Consensus 440 ~~~~i~~~~~s--p~~~~l~~-~~~---dg~i~iwd~~~~--~~-~~-----~~~-~~~~~~~~~i~~~~~s~d~~~l~s 504 (532)
|-.....+.+. +....|++ +.. .+.++|.++... +. .. ..+ ......-+.+.... ++.-..++.
T Consensus 197 ha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~v-s~k~g~iy~ 275 (1630)
T 1xi4_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI-SEKHDVVFL 275 (1630)
T ss_pred hHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEe-ccccCEEEE
Confidence 55444333332 11122322 221 268999998542 01 11 111 11101111222222 566678888
Q ss_pred EeCCCcEEEEeCCCCC
Q 009569 505 GSEDSQVNIFLSFSPF 520 (532)
Q Consensus 505 gs~dg~i~iw~~~~~~ 520 (532)
.+.-|.|+++|+.|+.
T Consensus 276 itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 276 ITKYGYIHLYDLETGT 291 (1630)
T ss_pred EecCceEEEEecccch
Confidence 8999999999999985
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.75 E-value=2.5 Score=39.16 Aligned_cols=220 Identities=11% Similarity=0.045 Sum_probs=112.4
Q ss_pred cEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEE
Q 009569 274 EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLH 353 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 353 (532)
.|..++.... ..++. . ||.|+.|-....+++... ......|..++...+. .++. . ||.|..|-....-.+.
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p---~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMP---AATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCC---GGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTC
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCC---ccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCC
Confidence 4556655433 22333 4 899999987654433210 1112356677765433 2333 4 8999999865422111
Q ss_pred EeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC-CeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCC
Q 009569 354 VYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG-RELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREA 432 (532)
Q Consensus 354 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~ 432 (532)
.-..-...|..++.-. .+.+.-. ||.|+.|-... +++- ........|..++...+ ..+.-. ||.|+.|-...
T Consensus 96 ~P~~~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNY 168 (282)
T ss_dssp CCGGGSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCT
T ss_pred CCcccCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCC-CCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCC
Confidence 1111134566666543 3444445 89999998653 2111 11112235776666443 333334 79999997654
Q ss_pred Cc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCc
Q 009569 433 NF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQ 510 (532)
Q Consensus 433 ~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~ 510 (532)
.- -.-......|..++...+.. ++. .||.|+.|=.....++-..... ...+..+.+ ..+.. ++ .. ||.
T Consensus 169 ~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~p~~~-~~~v~~i~~---G~~h~-~a-l~-~g~ 238 (282)
T 3qhy_B 169 FGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTVPTEA-LSGVSAIAS---GEWYS-LA-LK-NGK 238 (282)
T ss_dssp TSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCCCGGG-GSSCCEEEE---CSSCE-EE-EE-TTE
T ss_pred CCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCCCccc-CCCceEEEc---CCCEE-EE-EE-CCE
Confidence 32 11111234577777654333 333 5999999976554233211111 122223332 22222 33 33 999
Q ss_pred EEEEeCCCC
Q 009569 511 VNIFLSFSP 519 (532)
Q Consensus 511 i~iw~~~~~ 519 (532)
|+.|-.+..
T Consensus 239 v~~wG~n~~ 247 (282)
T 3qhy_B 239 VIAWGSSRT 247 (282)
T ss_dssp EEEESTTCC
T ss_pred EEEecCCCC
Confidence 999977653
No 351
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.25 E-value=8 Score=39.23 Aligned_cols=104 Identities=11% Similarity=0.054 Sum_probs=69.4
Q ss_pred ceEEEEEeeCCCEEEEEE-CCCeEEEEECCCCc--------------eeeeecCCceeEEEEcCCCCEEEEEecCCeEEE
Q 009569 403 RISDMAITDDGKRIISIC-REAAILLLDREANF--------------ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHL 467 (532)
Q Consensus 403 ~v~~~~~s~~~~~l~~~~-~dg~I~iwd~~~~~--------------~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i 467 (532)
....+.++|||+++++++ -+.++.++|++... .......-.....+|+++|.-..+.--|.+|.-
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEE
Confidence 456788999999988877 67899999998532 011122344677899999955555567999999
Q ss_pred EecCCC---------CcceeEEeccccceEEEEE--ccCCCCCcEEEEEe
Q 009569 468 WSIESD---------PKLVSRYKGHKRARFVIRS--CFGGFEQAFIASGS 506 (532)
Q Consensus 468 wd~~~~---------~~~~~~~~~~~~~~~~i~~--~~~s~d~~~l~sgs 506 (532)
|++... ...+.++..|-++...... ---.+||++|++..
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 999652 1456666666554333211 01257888888874
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.03 E-value=11 Score=37.68 Aligned_cols=107 Identities=12% Similarity=-0.008 Sum_probs=59.8
Q ss_pred ccEEEEEEccCCC-EEEEEeCCCeEEEEEeecCCeeEEEEEee---------cCCCCeEEEEeCCC----CCEEEEeeC-
Q 009569 273 DEVWFLQFSHDGK-YLASSSKDQSAIIWEVKEDGQVSLKHRLS---------GHRKPVFTVSWSPN----DHQLLTCGQ- 337 (532)
Q Consensus 273 ~~V~~v~~s~~g~-~las~s~dg~i~iwd~~~~~~~~~~~~~~---------~h~~~v~~l~~s~~----~~~l~s~~~- 337 (532)
...+.|+|.|+|. .|+++...|.|++++.........+..+. ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4568999999996 44445678999998643211001111111 11356789999996 433333222
Q ss_pred -C----------CcEEEEECCCC----------cEEEEee--ccCCceEEEEEeeCCCeEEEEeC
Q 009569 338 -E----------EAIRRWDVNSG----------ECLHVYE--KTGVGLISCGWFLDGGGIFAGMT 379 (532)
Q Consensus 338 -d----------g~i~iwd~~~~----------~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~ 379 (532)
+ ..|.-|.+..+ +.+..+. ........+.|.|||.++++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 14555665421 2222222 12344678999999987777554
No 353
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=90.44 E-value=13 Score=35.85 Aligned_cols=181 Identities=9% Similarity=-0.001 Sum_probs=91.3
Q ss_pred CEEEEEeCCCeEEEEEeec-CCeeEEEEEeecCCCCeEEEEeCC-CCCEEEEeeCCC----cEEEEECCCCcEEEEeec-
Q 009569 285 KYLASSSKDQSAIIWEVKE-DGQVSLKHRLSGHRKPVFTVSWSP-NDHQLLTCGQEE----AIRRWDVNSGECLHVYEK- 357 (532)
Q Consensus 285 ~~las~s~dg~i~iwd~~~-~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~- 357 (532)
..|..|+..| +.+++... +..+...... .....|.+|++.| +...|..++..| .|... .+.++.-..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~-~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~ 99 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPV-FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRP 99 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEE-STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCcc-CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCcc
Confidence 3566676666 55555432 2344433211 2345699999998 333444444444 34333 233332122111
Q ss_pred -------------cCCceEEEEEee-C-CCeEEEEeCCCcEEEEECCCCeEEEeec------------------CccCce
Q 009569 358 -------------TGVGLISCGWFL-D-GGGIFAGMTDKSICLWDLDGRELESWKG------------------QKTLRI 404 (532)
Q Consensus 358 -------------~~~~i~~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~------------------~~~~~v 404 (532)
....|.++++.| + ...++++...+.|...+-.+..-..... .....+
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCce
Confidence 112477888887 2 5667777666766665443333222211 112257
Q ss_pred EEEEEeeC-CCEEEEEECCCeEEEEECCCCc-eeeee-c------------CCceeEEEEcCC-CCEEEEEecCCeEEEE
Q 009569 405 SDMAITDD-GKRIISICREAAILLLDREANF-ERWIE-E------------EEVITSFSLSKD-NKYLLVNLINQEIHLW 468 (532)
Q Consensus 405 ~~~~~s~~-~~~l~~~~~dg~I~iwd~~~~~-~~~~~-~------------~~~i~~~~~sp~-~~~l~~~~~dg~i~iw 468 (532)
.+|.++|. ...++++..++.|...+-.... ..... . ...+.++.++|+ ...|+++...+ |+..
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s 258 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRM 258 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEE
T ss_pred eEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEe
Confidence 88999883 4455555555555554332222 11110 0 124889999986 35677766444 4444
Q ss_pred e
Q 009569 469 S 469 (532)
Q Consensus 469 d 469 (532)
+
T Consensus 259 ~ 259 (394)
T 3b7f_A 259 D 259 (394)
T ss_dssp E
T ss_pred C
Confidence 3
No 354
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=88.91 E-value=16 Score=34.51 Aligned_cols=198 Identities=6% Similarity=-0.018 Sum_probs=111.1
Q ss_pred ccEEEEEEccCCCEEEEEeCCCeEEEEEee---cCC---eeEEE---EEeecCCCCeEEE-EeCC--CCCEEEEeeCCCc
Q 009569 273 DEVWFLQFSHDGKYLASSSKDQSAIIWEVK---EDG---QVSLK---HRLSGHRKPVFTV-SWSP--NDHQLLTCGQEEA 340 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~dg~i~iwd~~---~~~---~~~~~---~~~~~h~~~v~~l-~~s~--~~~~l~s~~~dg~ 340 (532)
+.+..+........|+.-+..|.++-.... ..+ .-..+ ..+. ....|..+ .... +..+++.++.+|.
T Consensus 42 D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~ 120 (327)
T 3uc1_A 42 DIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGL 120 (327)
T ss_dssp GCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSE
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCE
Confidence 445444444555556555667766554432 110 00111 1111 23345444 4432 5779999999999
Q ss_pred EEEEECCCC-------cEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECC--CCe--------EEEeecCccCc
Q 009569 341 IRRWDVNSG-------ECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLD--GRE--------LESWKGQKTLR 403 (532)
Q Consensus 341 i~iwd~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~--------~~~~~~~~~~~ 403 (532)
|+.-.+... .....+.. ...+..+........++..+..|.+..+... .-. ..-+.-.....
T Consensus 121 iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~ 199 (327)
T 3uc1_A 121 VKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDR 199 (327)
T ss_dssp EEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCC
T ss_pred EEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCE
Confidence 999887432 11222332 3445555555566778888889988877765 211 11111122336
Q ss_pred eEEEEEeeCCCEEEEEECCCeEEEEECCCCc--------e---eeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCC
Q 009569 404 ISDMAITDDGKRIISICREAAILLLDREANF--------E---RWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIES 472 (532)
Q Consensus 404 v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--------~---~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~ 472 (532)
|.++...+++..++.++..|.++.-.+.... . .+......+..+....+...++..+.+|.+.-++...
T Consensus 200 Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 200 LLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 7777776677789999999999988764322 1 1111133444444444455666677788777777643
No 355
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.91 E-value=20 Score=34.54 Aligned_cols=185 Identities=9% Similarity=0.072 Sum_probs=91.2
Q ss_pred cccEEEEEEcc--CCCEEEEEeCCC--eEEEEEeec-CCeeEEEEE---eec--------CCCCeEEEEeCCC--CCEEE
Q 009569 272 SDEVWFLQFSH--DGKYLASSSKDQ--SAIIWEVKE-DGQVSLKHR---LSG--------HRKPVFTVSWSPN--DHQLL 333 (532)
Q Consensus 272 ~~~V~~v~~s~--~g~~las~s~dg--~i~iwd~~~-~~~~~~~~~---~~~--------h~~~v~~l~~s~~--~~~l~ 333 (532)
...|.++++.| .+.+.|. +..| -..||.... +..+..... +.. +...|.++++.|. ...+.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g-~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMA-ARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEE-EEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEE-ecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 35699999998 4554444 3333 112343332 333333221 111 1125778899872 45566
Q ss_pred EeeCCCcEEEEECCCCcEEEEeec-------------------cCCceEEEEEeeC-CCeEEEEeCCCcEEEEECCCCeE
Q 009569 334 TCGQEEAIRRWDVNSGECLHVYEK-------------------TGVGLISCGWFLD-GGGIFAGMTDKSICLWDLDGREL 393 (532)
Q Consensus 334 s~~~dg~i~iwd~~~~~~~~~~~~-------------------~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~ 393 (532)
.+...+.|...+ ..++.-..+.. ....+.++.+.|. ...++++..++.|...+-.+...
T Consensus 133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW 211 (394)
T 3b7f_A 133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDW 211 (394)
T ss_dssp EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSC
T ss_pred EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCCc
Confidence 666556555443 22322222211 1235778888873 45566665555555544333322
Q ss_pred EEeecC-c-----------cCceEEEEEeeC-CCEEEEEECCCeEEEEECCCCc-eeeee--cC---CceeEEEEcCC-C
Q 009569 394 ESWKGQ-K-----------TLRISDMAITDD-GKRIISICREAAILLLDREANF-ERWIE--EE---EVITSFSLSKD-N 453 (532)
Q Consensus 394 ~~~~~~-~-----------~~~v~~~~~s~~-~~~l~~~~~dg~I~iwd~~~~~-~~~~~--~~---~~i~~~~~sp~-~ 453 (532)
...... . ...+.+++++|+ ...++++... .|...+-.... ..... .. ..+.++.++|. .
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~-gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~ 290 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC-GIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDP 290 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT-EEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCT
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC-eEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCC
Confidence 222110 0 124889999985 3566666654 45555433332 11111 11 23567888863 3
Q ss_pred CEEEEE
Q 009569 454 KYLLVN 459 (532)
Q Consensus 454 ~~l~~~ 459 (532)
..|+++
T Consensus 291 ~~l~~~ 296 (394)
T 3b7f_A 291 RTVWVF 296 (394)
T ss_dssp TCEEEE
T ss_pred CEEEEE
Confidence 445554
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=87.60 E-value=12 Score=34.49 Aligned_cols=180 Identities=11% Similarity=0.017 Sum_probs=91.2
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC-CeEEEee
Q 009569 319 PVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG-RELESWK 397 (532)
Q Consensus 319 ~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~ 397 (532)
.|..++..... .++. . ||.|..|-....-.+..-......|..++...+ ..++. . ||.|+.|-... +++-. .
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg~-P 97 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTTV-P 97 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCC-C
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCCC-C
Confidence 46666664332 2222 4 899999976432211111112234666655422 22333 4 89999998653 11110 1
Q ss_pred cCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCc
Q 009569 398 GQKTLRISDMAITDDGKRIISICREAAILLLDREANF--ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPK 475 (532)
Q Consensus 398 ~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~ 475 (532)
..-...|..++...+ ..++.. +|.|+.|-....- -........|..++...+. .++-. ||.|+.|-.....+
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTST
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCC
Confidence 111125777766544 444455 9999999865432 1111223457777665433 33333 79999998655423
Q ss_pred ceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 476 LVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 476 ~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
+-... .....+..+.+ ..+ ..++. .||.|+.|-.+.
T Consensus 172 lg~p~-~~~~~v~~i~~---G~~-hs~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 172 TTVPA-EAQSGVDDVAG---GIF-HSLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp TSCCG-GGGSSEEEEEE---CSS-EEEEE--ETTEEEEEECCT
T ss_pred CCCce-ecCCCeEEEEe---cCC-EEEEE--ECCeEEEEECCC
Confidence 22111 11223323322 222 23333 699999997654
No 357
>3ukx_C Bimax2 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; 2.20A {Mus musculus}
Probab=87.43 E-value=0.22 Score=26.03 Aligned_cols=12 Identities=33% Similarity=0.758 Sum_probs=10.0
Q ss_pred CCCCCccccccC
Q 009569 5 EESEPPLKRAKG 16 (532)
Q Consensus 5 ~~~~~~~~~~~~ 16 (532)
+||+||.||+++
T Consensus 16 ddddppkkrrrl 27 (28)
T 3ukx_C 16 DDDDPPKKRRRL 27 (28)
T ss_dssp CSSSCCSCCCCC
T ss_pred cCCCchhhhhcc
Confidence 678899999875
No 358
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=86.88 E-value=18 Score=33.05 Aligned_cols=194 Identities=11% Similarity=0.058 Sum_probs=109.2
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEE---ECCCCcEEEEeeccCCceEEEEEee--CCCeEEEEeCCCcEEEEECCCC--
Q 009569 319 PVFTVSWSPNDHQLLTCGQEEAIRRW---DVNSGECLHVYEKTGVGLISCGWFL--DGGGIFAGMTDKSICLWDLDGR-- 391 (532)
Q Consensus 319 ~v~~l~~s~~~~~l~s~~~dg~i~iw---d~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~-- 391 (532)
.+..+.-.....+|+.-+..|.++-- ++..+.....+. ....|..+.. + +...++..+.+|.++...+..-
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~ 102 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEY 102 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTT
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhh
Confidence 34443333334455555666665543 322221111122 3455666544 4 4678999999999999886432
Q ss_pred ---eEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--------eee--eecCCceeEEEEcCCCCEEEE
Q 009569 392 ---ELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF--------ERW--IEEEEVITSFSLSKDNKYLLV 458 (532)
Q Consensus 392 ---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--------~~~--~~~~~~i~~~~~sp~~~~l~~ 458 (532)
-...........+..+........++..+..|.++.++...-. ... ......|..+...+++.+++.
T Consensus 103 ~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~ 182 (276)
T 3no0_A 103 KAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLV 182 (276)
T ss_dssp CSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEE
T ss_pred hcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEE
Confidence 1222222223366666666666788889999999888764321 111 223455666665566778889
Q ss_pred EecCCeEEEEecCCC------CcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEE--EeCCC
Q 009569 459 NLINQEIHLWSIESD------PKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNI--FLSFS 518 (532)
Q Consensus 459 ~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~i--w~~~~ 518 (532)
.+..|.++...+..- .+-+..+ ..... ++.+.. ..+...++..+.+|.+.. ++...
T Consensus 183 ~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~--lv~~~~-~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 183 ITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDT--LVDLIP-IKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSC--EEEEEE-ESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCc--EEEEEE-eCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 999999998887532 0112222 11222 222222 223446677788898888 77653
No 359
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=86.77 E-value=23 Score=34.12 Aligned_cols=227 Identities=13% Similarity=0.155 Sum_probs=119.1
Q ss_pred CCEEEEEeCCCeEEEEEeecCCe--------eEEEEEeec-CCCCeEEEEeCCCCCEEEEeeCCCcEEEEECCCC-----
Q 009569 284 GKYLASSSKDQSAIIWEVKEDGQ--------VSLKHRLSG-HRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSG----- 349 (532)
Q Consensus 284 g~~las~s~dg~i~iwd~~~~~~--------~~~~~~~~~-h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~----- 349 (532)
....+.-..||.|..|-....++ ......+.. ....+..++.+......+....||.|+.|-....
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 34445556788999887553221 111122222 2334555677666667777788999999965321
Q ss_pred ------cEEEEeecc-CCceEEEEEeeCCCeEEEEeCCCcEEEEECCC----------C--eEEEeecCccCceEEEEEe
Q 009569 350 ------ECLHVYEKT-GVGLISCGWFLDGGGIFAGMTDKSICLWDLDG----------R--ELESWKGQKTLRISDMAIT 410 (532)
Q Consensus 350 ------~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~----------~--~~~~~~~~~~~~v~~~~~s 410 (532)
.....+... ...|..++. ...+.++-..+|.|+.|-... . ............|..++..
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 111122211 224555544 445666667899999997632 0 1111112222357777665
Q ss_pred eCCCEEEEEECCCeEEEEECCCCc------------eeeee--cCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcc
Q 009569 411 DDGKRIISICREAAILLLDREANF------------ERWIE--EEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKL 476 (532)
Q Consensus 411 ~~~~~l~~~~~dg~I~iwd~~~~~------------~~~~~--~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~ 476 (532)
......++...+|.|+.|-....- ..... ....|..++.. ..+.++-..+|.|+.|=.....++
T Consensus 220 ~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqL 297 (389)
T 3kci_A 220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRL 297 (389)
T ss_dssp CSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTT
T ss_pred CCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCC
Confidence 434567777899999999754311 01111 11235555543 344555567899999975432111
Q ss_pred -------e---eEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 477 -------V---SRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 477 -------~---~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
. ..+.... ...++.+.. . ....+....||.|+.|=.+.
T Consensus 298 G~g~~~~~~~P~~v~~l~-~~~v~~ia~-G--~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 298 GHGSDDHVRRPRQVQGLQ-GKKVIAIAT-G--SLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp CSSSCCCEEEEEECGGGT-TCCEEEEEE-C--SSEEEEEETTCCEEEEECCT
T ss_pred CCCCCccccCCeEeccCC-CCCEEEEEe-c--cCeEEEECCCCCEEEeeCCC
Confidence 0 0111111 111222322 1 23445567899999998764
No 360
>3ukw_C Bimax1 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; HET: BTB; 2.10A {Mus musculus}
Probab=86.08 E-value=0.19 Score=26.26 Aligned_cols=12 Identities=50% Similarity=0.803 Sum_probs=10.1
Q ss_pred CCCCCccccccC
Q 009569 5 EESEPPLKRAKG 16 (532)
Q Consensus 5 ~~~~~~~~~~~~ 16 (532)
||+|||-||.++
T Consensus 16 edeepprkrkrl 27 (28)
T 3ukw_C 16 EDEEPPRKRKRL 27 (28)
T ss_dssp GGGSCCSSCCCC
T ss_pred cccCcchhhhcc
Confidence 788999998775
No 361
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=84.21 E-value=1.1 Score=32.46 Aligned_cols=29 Identities=14% Similarity=0.135 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhcChHHHHHHHhhhcCcc
Q 009569 65 EFIKIITRALYSLGYDKSGALLEEESGIP 93 (532)
Q Consensus 65 e~~~lI~q~L~e~G~~~sa~~L~~Es~i~ 93 (532)
-++-||-.||+-.||+.|..+|+-|+|.+
T Consensus 20 Li~~LVrEyLef~~l~~TlsVf~pEs~l~ 48 (82)
T 2d68_A 20 LVASLVAEFLQFFNLDFTLAVFQPETSTL 48 (82)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCcchHHhhhhccCCC
Confidence 57889999999999999999999999997
No 362
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=83.26 E-value=30 Score=32.43 Aligned_cols=235 Identities=11% Similarity=0.045 Sum_probs=124.7
Q ss_pred cCCCEEEEEeCCCeEEEEEeecCCe-eEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEEC---C------CCcE
Q 009569 282 HDGKYLASSSKDQSAIIWEVKEDGQ-VSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDV---N------SGEC 351 (532)
Q Consensus 282 ~~g~~las~s~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~---~------~~~~ 351 (532)
|+..++++.+.+|.|+--....-.. -.....+... ..+..+........|+..+..|.++-... . .|..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 5667788888999888765541100 0000112223 23334444444556666777787655544 2 1221
Q ss_pred EEE-ee-ccCCceEEEEEeeC---CCeEEEEeCCCcEEEEECCC-------CeEEEeecCccCceEEEEEeeCCCEEEEE
Q 009569 352 LHV-YE-KTGVGLISCGWFLD---GGGIFAGMTDKSICLWDLDG-------RELESWKGQKTLRISDMAITDDGKRIISI 419 (532)
Q Consensus 352 ~~~-~~-~~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 419 (532)
+.. +. .....|.++...++ +.+++..+.+|.++...+.. .-+..+.....+.+..+........++..
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~ 161 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEE
Confidence 111 11 12344655544332 56789999999999988741 12222222222456666665566678888
Q ss_pred ECCCeEEEEECCCCc--------eee--eecCCceeEEEEcCCCC-EEEEEecCCeEEEEecCCC------CcceeEEec
Q 009569 420 CREAAILLLDREANF--------ERW--IEEEEVITSFSLSKDNK-YLLVNLINQEIHLWSIESD------PKLVSRYKG 482 (532)
Q Consensus 420 ~~dg~I~iwd~~~~~--------~~~--~~~~~~i~~~~~sp~~~-~l~~~~~dg~i~iwd~~~~------~~~~~~~~~ 482 (532)
+.+|.+..++...-. ... ......|.++..-+++. .+++.+..|..+..++... .+-+..++.
T Consensus 162 T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~ 241 (323)
T 1wp5_A 162 THNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRE 241 (323)
T ss_dssp ETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCC
T ss_pred eCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeee
Confidence 999999988864321 111 12344566665444445 7888888998888777542 011111211
Q ss_pred c-ccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 483 H-KRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 483 ~-~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
. .....++.+.. ..++..++..+.+|.+....+..
T Consensus 242 ~~~~~~~l~~~~~-v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 242 LKANPHRISGFVV-AQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp CSSSCCCEEEEEE-ECTTCEEEEEETTSCEEEEEGGG
T ss_pred cCCCCceEEEEEE-eCCCCeEEEEeCCCeEEEEEhhh
Confidence 1 11111222222 12334566677788877766654
No 363
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=81.23 E-value=22 Score=35.35 Aligned_cols=105 Identities=13% Similarity=0.226 Sum_probs=58.8
Q ss_pred ceEEEEEeeCCC-EEEEEECCCeEEEEECCCCc--eee------ee------cCCceeEEEEcCC----CCEEEEEecC-
Q 009569 403 RISDMAITDDGK-RIISICREAAILLLDREANF--ERW------IE------EEEVITSFSLSKD----NKYLLVNLIN- 462 (532)
Q Consensus 403 ~v~~~~~s~~~~-~l~~~~~dg~I~iwd~~~~~--~~~------~~------~~~~i~~~~~sp~----~~~l~~~~~d- 462 (532)
....|+|.|+|. .++++...|.|++++..... ..+ .. .......|+|+|+ +.+.++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 578999999996 56666889999999754321 111 11 1356788999996 3333333221
Q ss_pred -----------CeEEEEecCCC---------CcceeEEeccccceEEEEEccCCCCCcEEEEEeCC
Q 009569 463 -----------QEIHLWSIESD---------PKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSED 508 (532)
Q Consensus 463 -----------g~i~iwd~~~~---------~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~d 508 (532)
..|.-|.+... .+.+..+......-+.-++.| .|||.+.++.++.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~f-gpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLF-GPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEE-CTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeE-CCCCcEEEEeCCC
Confidence 13444555321 122323321111112345667 8999877766553
No 364
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=80.05 E-value=35 Score=31.10 Aligned_cols=195 Identities=12% Similarity=0.059 Sum_probs=111.2
Q ss_pred ccEEEEEEccCCCEEEEEeCCCeEEEE---EeecCCeeEEEEEeecCCCCeEEEEeCC-CCCEEEEeeCCCcEEEEECCC
Q 009569 273 DEVWFLQFSHDGKYLASSSKDQSAIIW---EVKEDGQVSLKHRLSGHRKPVFTVSWSP-NDHQLLTCGQEEAIRRWDVNS 348 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~dg~i~iw---d~~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~ 348 (532)
+.+..+.......+|+.-+.+|.++-- ++....... + +. ....|..+.... +..+++..+.+|.++...+..
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l--l~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L--KS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C--SS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGG
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c--CC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHH
Confidence 455555555555556666677776543 333221111 1 32 345566654421 467899999999999988754
Q ss_pred Cc------EEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC--------CeEEEeecCccCceEEEEEeeCCC
Q 009569 349 GE------CLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG--------RELESWKGQKTLRISDMAITDDGK 414 (532)
Q Consensus 349 ~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~~~~~v~~~~~s~~~~ 414 (532)
-. ....+. ....+..+........++..+..|.++.+.... .-..-+.-.....|..+...+++.
T Consensus 100 ~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 100 FEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEP 178 (276)
T ss_dssp TTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCS
T ss_pred hhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCC
Confidence 31 112222 234555555555666788889999988887531 111111112233677776666677
Q ss_pred EEEEEECCCeEEEEECCCCc--------eeeeecCCceeEEEEcCCCCEEEEEecCCeEEE--EecCC
Q 009569 415 RIISICREAAILLLDREANF--------ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHL--WSIES 472 (532)
Q Consensus 415 ~l~~~~~dg~I~iwd~~~~~--------~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i--wd~~~ 472 (532)
.++..+..|.++...+.... .........+..+....+...++..+.+|.+.. ++...
T Consensus 179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 89999999999998875432 111123344444433334445666666777766 76543
No 365
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=76.48 E-value=81 Score=33.25 Aligned_cols=190 Identities=10% Similarity=0.050 Sum_probs=97.7
Q ss_pred eCCCCCEEEEe-eCC----CcEEEEECCCCcEEE-Eee-ccCC------ceEEEEEeeCCCeEEEEe-----------CC
Q 009569 325 WSPNDHQLLTC-GQE----EAIRRWDVNSGECLH-VYE-KTGV------GLISCGWFLDGGGIFAGM-----------TD 380 (532)
Q Consensus 325 ~s~~~~~l~s~-~~d----g~i~iwd~~~~~~~~-~~~-~~~~------~i~~~~~~~~~~~l~~~~-----------~d 380 (532)
++|++++++.+ |.. ..++++|+.+++.+. .|. .... ....++|..+ ..++.+. ..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCCcCcCCCC
Confidence 78888876654 323 369999999998763 122 0011 1134578744 4444432 12
Q ss_pred CcEEEEECCCC---eEEEeecCccCceEEEEEeeCCCE-----EEEEE---CCCeEEEEECCCC--c-eeeeecCCceeE
Q 009569 381 KSICLWDLDGR---ELESWKGQKTLRISDMAITDDGKR-----IISIC---REAAILLLDREAN--F-ERWIEEEEVITS 446 (532)
Q Consensus 381 g~i~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~-----l~~~~---~dg~I~iwd~~~~--~-~~~~~~~~~i~~ 446 (532)
..|+.|.+-+. ....+.......-.....++++++ +++.+ ....+++.|.... . ..+..... ..
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~ 293 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSD--AT 293 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTT--CE
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCc--ce
Confidence 46888887542 222233222222334555666662 44433 2245677776542 2 22211111 12
Q ss_pred EEEcCCCCEEEEE----------ecCCeEEEEecCCCC------cceeEEeccccceEEEEEccCCCCCcEEEEEeCCCc
Q 009569 447 FSLSKDNKYLLVN----------LINQEIHLWSIESDP------KLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQ 510 (532)
Q Consensus 447 ~~~sp~~~~l~~~----------~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~ 510 (532)
+..++++.+++.. ...+.|...|+.+.. .....+-.+.....+-.+.+ .. +.++++...++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~-~~l~~~~~~~~~ 371 (711)
T 4hvt_A 294 LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFIST-TK-DRVFLATYDNVV 371 (711)
T ss_dssp EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEE-CS-SCEEEEEEETTE
T ss_pred EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEE-EC-CEEEEEEEECCE
Confidence 2344456555532 246779999987641 22333333444333434444 43 367777777775
Q ss_pred --EEEEeCCCC
Q 009569 511 --VNIFLSFSP 519 (532)
Q Consensus 511 --i~iw~~~~~ 519 (532)
|+++++.++
T Consensus 372 ~~l~~~~~~~g 382 (711)
T 4hvt_A 372 AKVVTFTLENE 382 (711)
T ss_dssp EEEEEECEETT
T ss_pred EEEEEEECCCC
Confidence 677777665
No 366
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.94 E-value=50 Score=36.27 Aligned_cols=38 Identities=11% Similarity=0.329 Sum_probs=33.5
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEee
Q 009569 319 PVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYE 356 (532)
Q Consensus 319 ~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 356 (532)
.+.++...++..++++-+.|+++++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56778888888999999999999999999999987754
No 367
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=70.98 E-value=66 Score=29.78 Aligned_cols=197 Identities=5% Similarity=-0.021 Sum_probs=106.4
Q ss_pred cEEEEEEccCCCEEEEEeCCCeEEEEEeec---CCe---eEEEE---EeecCCCCeEEEEe-C--CCCCEEEEeeCCCcE
Q 009569 274 EVWFLQFSHDGKYLASSSKDQSAIIWEVKE---DGQ---VSLKH---RLSGHRKPVFTVSW-S--PNDHQLLTCGQEEAI 341 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~dg~i~iwd~~~---~~~---~~~~~---~~~~h~~~v~~l~~-s--~~~~~l~s~~~dg~i 341 (532)
.+..+........|+..+..|.++-+.... .+. -..+. .+. ....|.++.. . .++.+++..+.+|.+
T Consensus 43 ~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~ 121 (307)
T 1zi0_A 43 FIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTV 121 (307)
T ss_dssp CEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEE
T ss_pred EEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeE
Confidence 343444444455666666778766655431 110 01100 122 2334555433 2 345678899999999
Q ss_pred EEEECCC-------CcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC--------CeEEEeecCccCceEE
Q 009569 342 RRWDVNS-------GECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG--------RELESWKGQKTLRISD 406 (532)
Q Consensus 342 ~iwd~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~~~~~v~~ 406 (532)
+...+.. |.....+... +.+..+....+...++..+.+|.+..++... .-..-+.......|.+
T Consensus 122 Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~ 200 (307)
T 1zi0_A 122 KKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVS 200 (307)
T ss_dssp EEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEE
T ss_pred EEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEE
Confidence 9987742 2111223333 4555555555566788888899888887632 1111122223336777
Q ss_pred EEEeeCCCEEEEEECCCeEEEEECCCCc-----------eeeeecCCceeEEEEcCCCCEEEEEecCCeEEEEecCC
Q 009569 407 MAITDDGKRIISICREAAILLLDREANF-----------ERWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIES 472 (532)
Q Consensus 407 ~~~s~~~~~l~~~~~dg~I~iwd~~~~~-----------~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~ 472 (532)
+...+++..+++.+..|.++-.++.... ..+......+..+....+...++..+.+|.+.-+++..
T Consensus 201 ~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 201 LIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred EEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 7665566678888999999988774322 11111223444443333344455556677666666543
No 368
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=67.88 E-value=87 Score=29.92 Aligned_cols=198 Identities=8% Similarity=0.015 Sum_probs=105.5
Q ss_pred cccEEEEEEccCCCEEEEEeCCCeEEEEEeec---CC---eeEEEE---EeecCCCCeEEEE-eC--CCCCEEEEeeCCC
Q 009569 272 SDEVWFLQFSHDGKYLASSSKDQSAIIWEVKE---DG---QVSLKH---RLSGHRKPVFTVS-WS--PNDHQLLTCGQEE 339 (532)
Q Consensus 272 ~~~V~~v~~s~~g~~las~s~dg~i~iwd~~~---~~---~~~~~~---~~~~h~~~v~~l~-~s--~~~~~l~s~~~dg 339 (532)
.+.+..+........|+..+..|.++-+.... .+ .-.... .+. ....|.++. .. .++.+|+.++..|
T Consensus 45 ~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G 123 (370)
T 3l6v_A 45 EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNG 123 (370)
T ss_dssp CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTS
T ss_pred CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCC
Confidence 45555555555566677677788776665431 10 000100 122 233454443 33 2456899999999
Q ss_pred cEEEEECCC-------CcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC--------CeEEEeecCccCce
Q 009569 340 AIRRWDVNS-------GECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG--------RELESWKGQKTLRI 404 (532)
Q Consensus 340 ~i~iwd~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~~~~~v 404 (532)
.++...+.. |.....+.. ...+..+........++..+.+|.+..++... .-+.-+.......|
T Consensus 124 ~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~V 202 (370)
T 3l6v_A 124 TVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEV 202 (370)
T ss_dssp EEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCE
T ss_pred eEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEE
Confidence 999888632 222222322 44555555555666788888889888887632 11222222223356
Q ss_pred EEEEEee-----------------------------------CCCEEEEEECCCeEEEEECCCCc-----------eeee
Q 009569 405 SDMAITD-----------------------------------DGKRIISICREAAILLLDREANF-----------ERWI 438 (532)
Q Consensus 405 ~~~~~s~-----------------------------------~~~~l~~~~~dg~I~iwd~~~~~-----------~~~~ 438 (532)
.++...+ ++..+++.+..|..+...+.... ..+.
T Consensus 203 v~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~ 282 (370)
T 3l6v_A 203 VSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTT 282 (370)
T ss_dssp EEEEEECCC-----------------------------------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCC
T ss_pred EEEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEec
Confidence 6655544 44578899999998888875432 1111
Q ss_pred ecCCceeEEEEcCCCCEEEEEecCCeEEEEecC
Q 009569 439 EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 439 ~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~ 471 (532)
...+.+..+.+..+...++..+..|.+.-..+.
T Consensus 283 ~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 283 ERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp TTTCSEEEEEEECTTCEEEEEETTCCEEEEEGG
T ss_pred CCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHh
Confidence 122334443333333444455556665555543
No 369
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=66.27 E-value=84 Score=29.15 Aligned_cols=189 Identities=10% Similarity=0.055 Sum_probs=109.5
Q ss_pred cCCCEEEEEeCCCeEEEEEeecCCe------eEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEECC---CC---
Q 009569 282 HDGKYLASSSKDQSAIIWEVKEDGQ------VSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDVN---SG--- 349 (532)
Q Consensus 282 ~~g~~las~s~dg~i~iwd~~~~~~------~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~---~~--- 349 (532)
++..++++.+.+|.|+--....-.. -.....+... ..+..+........++..+..|.++-.... ..
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 4667788899999998776643211 0011112222 234444444445567777888877666553 11
Q ss_pred ---cE---EEEeeccCCceEEEEEee---CCCeEEEEeCCCcEEEEECCC------CeEEEeecCccCceEEEEEeeCCC
Q 009569 350 ---EC---LHVYEKTGVGLISCGWFL---DGGGIFAGMTDKSICLWDLDG------RELESWKGQKTLRISDMAITDDGK 414 (532)
Q Consensus 350 ---~~---~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~------~~~~~~~~~~~~~v~~~~~s~~~~ 414 (532)
.. ...+. ....|.++...+ +..+++..+.+|.++...+.. .-...........+..+....+..
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 11 00122 233455554433 466788899999999888742 111122222234666666665567
Q ss_pred EEEEEECCCeEEEEECCCCc--------eee--eecCCceeEEEEcCCCCEEEEEecCCeEEEEecCC
Q 009569 415 RIISICREAAILLLDREANF--------ERW--IEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIES 472 (532)
Q Consensus 415 ~l~~~~~dg~I~iwd~~~~~--------~~~--~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~ 472 (532)
.++..+.+|.+..+....-. ... ......|.++..-.++..+++.+..|..+..++..
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 88889999999999875421 111 12345566666655667788888899999888754
No 370
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=63.20 E-value=98 Score=28.87 Aligned_cols=197 Identities=7% Similarity=0.029 Sum_probs=105.5
Q ss_pred cEEEEEEccCCCEEEEEeCCCeEEEEEeec---CC---eeEEE---EEeecCCCCeEEE-EeCC--CCCEEEEeeCCCcE
Q 009569 274 EVWFLQFSHDGKYLASSSKDQSAIIWEVKE---DG---QVSLK---HRLSGHRKPVFTV-SWSP--NDHQLLTCGQEEAI 341 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~dg~i~iwd~~~---~~---~~~~~---~~~~~h~~~v~~l-~~s~--~~~~l~s~~~dg~i 341 (532)
.+..+........|+..+..|.++-+.... .+ .-.++ ..+. ....|.++ ...+ ++.+++.++.+|.+
T Consensus 40 ~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~i 118 (323)
T 1wp5_A 40 RLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMV 118 (323)
T ss_dssp CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEE
T ss_pred EEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeE
Confidence 344444444555666667778766655431 11 00110 0111 22345543 3432 25688999999999
Q ss_pred EEEECCC------CcEEE--EeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC--------CeEEEeecCccCceE
Q 009569 342 RRWDVNS------GECLH--VYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG--------RELESWKGQKTLRIS 405 (532)
Q Consensus 342 ~iwd~~~------~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~~~~~v~ 405 (532)
+...+.. +.-+. .+.. .+.+..+........++..+.+|.+..+.... .-+.-+.......|.
T Consensus 119 Krt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv 197 (323)
T 1wp5_A 119 KKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIV 197 (323)
T ss_dssp EEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEE
T ss_pred EEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEE
Confidence 9988742 11122 2332 34555555555566788888999988887642 112222222333577
Q ss_pred EEEEeeCCC-EEEEEECCCeEEEEECCCCc--------eeee----ecCCceeEEEEcCCCCEEEEEecCCeEEEEecCC
Q 009569 406 DMAITDDGK-RIISICREAAILLLDREANF--------ERWI----EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIES 472 (532)
Q Consensus 406 ~~~~s~~~~-~l~~~~~dg~I~iwd~~~~~--------~~~~----~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~ 472 (532)
++...+++. .+++.+..|..+..++.... .... .....+..+....++..++..+.+|.+.-..+..
T Consensus 198 ~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 198 SGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp EEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred EEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 775555455 78888999998888775421 1111 1122344333223344455666677766666544
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=62.50 E-value=1e+02 Score=28.82 Aligned_cols=232 Identities=10% Similarity=0.034 Sum_probs=124.0
Q ss_pred CEEEEEeCCCeEEEEEeec------CCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEE---ECCC------C
Q 009569 285 KYLASSSKDQSAIIWEVKE------DGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRW---DVNS------G 349 (532)
Q Consensus 285 ~~las~s~dg~i~iwd~~~------~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iw---d~~~------~ 349 (532)
..+++.+.+|.|+--.+.+ ++.-..-..+.. ...+..+........|+.-+..|.++.. ++.. |
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke-~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQ-DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCG-GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 4566777788777654331 000000011111 2234444433444556655666765544 3332 2
Q ss_pred cEEEEe-e-ccCCceEEEEEee---CCCeEEEEeCCCcEEEEECCCC------eEEEeecCccCceEEEEEeeCCCEEEE
Q 009569 350 ECLHVY-E-KTGVGLISCGWFL---DGGGIFAGMTDKSICLWDLDGR------ELESWKGQKTLRISDMAITDDGKRIIS 418 (532)
Q Consensus 350 ~~~~~~-~-~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~v~~~~~s~~~~~l~~ 418 (532)
..+..+ . .....|.++...+ +..+++..+.+|.++...+..- -...........+..+........++.
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill 162 (327)
T 3uc1_A 83 QHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLL 162 (327)
T ss_dssp EEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEE
T ss_pred EEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEE
Confidence 221111 1 1244566554443 4778999999999999886431 122222222335666666666678888
Q ss_pred EECCCeEEEEECC--CCc--------eee--eecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCC------cceeEE
Q 009569 419 ICREAAILLLDRE--ANF--------ERW--IEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDP------KLVSRY 480 (532)
Q Consensus 419 ~~~dg~I~iwd~~--~~~--------~~~--~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~------~~~~~~ 480 (532)
.+..|.+..+... .-. ... ......|.++...+++.+++..+..|.++.-.+.... .-+..+
T Consensus 163 ~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~ 242 (327)
T 3uc1_A 163 VSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTV 242 (327)
T ss_dssp EETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESS
T ss_pred EECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEE
Confidence 8999999988876 211 111 2334567777766667789999999999888765321 111112
Q ss_pred eccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 481 KGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 481 ~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
.-......++.+.. ..+...++..+.+|.+.-++...
T Consensus 243 ~l~~~~d~lv~~~~-~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 243 MYDRRRGRLVGALI-VDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CCCTTTCSEEEEEE-ECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EecCCCCeEEEEEE-eCCCccEEEEcCCCeEEEEehhh
Confidence 21110111233322 22344566677888877776543
No 372
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=60.47 E-value=1.7e+02 Score=30.75 Aligned_cols=235 Identities=11% Similarity=0.097 Sum_probs=119.6
Q ss_pred EEEE-EccCCCEEEEE-----eCCCeEEEEEeecCCeeEEEEEee-cCCC------CeEEEEeCCCCCEEEEee------
Q 009569 276 WFLQ-FSHDGKYLASS-----SKDQSAIIWEVKEDGQVSLKHRLS-GHRK------PVFTVSWSPNDHQLLTCG------ 336 (532)
Q Consensus 276 ~~v~-~s~~g~~las~-----s~dg~i~iwd~~~~~~~~~~~~~~-~h~~------~v~~l~~s~~~~~l~s~~------ 336 (532)
..+. ++|++++++.+ +.-..++++|+.++..+. ..+. .-.. ....++|..++..+++..
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~--~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK--NGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT--TCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC--CCcccccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 3444 88999987753 222468999998762210 0111 0000 013347763343444321
Q ss_pred ----CCCcEEEEECCCC--cEEEEeeccCCce-EEEEEeeCCCe-----EEEEe---CCCcEEEEECCC--CeEEEeecC
Q 009569 337 ----QEEAIRRWDVNSG--ECLHVYEKTGVGL-ISCGWFLDGGG-----IFAGM---TDKSICLWDLDG--RELESWKGQ 399 (532)
Q Consensus 337 ----~dg~i~iwd~~~~--~~~~~~~~~~~~i-~~~~~~~~~~~-----l~~~~---~dg~i~iwd~~~--~~~~~~~~~ 399 (532)
....|+.|.+-+. +-...+......+ .+...++++++ +++.+ ....+++.|... ++...+...
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 289 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMP 289 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecC
Confidence 1246888888654 2344555443333 23444556653 34333 224566777653 444444333
Q ss_pred ccCceEEEEEeeCCCEEEEE----------ECCCeEEEEECCCC-------c--eeeeec--CCceeEEEEcCCCCEEEE
Q 009569 400 KTLRISDMAITDDGKRIISI----------CREAAILLLDREAN-------F--ERWIEE--EEVITSFSLSKDNKYLLV 458 (532)
Q Consensus 400 ~~~~v~~~~~s~~~~~l~~~----------~~dg~I~iwd~~~~-------~--~~~~~~--~~~i~~~~~sp~~~~l~~ 458 (532)
.. ..+..+.++.+++.. ...+.|...|+.+. . ..++.+ ...+..+.+..+ .++++
T Consensus 290 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~ 365 (711)
T 4hvt_A 290 SD---ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLA 365 (711)
T ss_dssp TT---CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEE
T ss_pred Cc---ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEE
Confidence 22 123345566555532 24677999998763 1 222333 346778888876 56667
Q ss_pred EecCCe--EEEEecCCCCc-ceeE-Eecc-ccceEEEEEccCCCCC-cEEEEEeC---CCcEEEEeCCCCCc
Q 009569 459 NLINQE--IHLWSIESDPK-LVSR-YKGH-KRARFVIRSCFGGFEQ-AFIASGSE---DSQVNIFLSFSPFA 521 (532)
Q Consensus 459 ~~~dg~--i~iwd~~~~~~-~~~~-~~~~-~~~~~~i~~~~~s~d~-~~l~sgs~---dg~i~iw~~~~~~~ 521 (532)
...++. +.++|+.++ . .... +... ...+... .. ++++ .++++.+. -+.++.+|+. +..
T Consensus 366 ~~~~~~~~l~~~~~~~g-~~~~~~~i~lp~~~~~~~~--~~-~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~ 432 (711)
T 4hvt_A 366 TYDNVVAKVVTFTLENE-QWTKPVVLKLPYQNAIFGM--SS-YEEEEEALITIENSIVPPTIYLWVKT-HEL 432 (711)
T ss_dssp EEETTEEEEEEECEETT-EECCCEEECCCSTTCEEEE--EC-CTTCSCEEEEEECSSSCCEEEEECTT-SCE
T ss_pred EEECCEEEEEEEECCCC-ceEEEeccCCCCCeEEEEE--ee-cCcCCEEEEEEecCCCCCEEEEEeCC-CcE
Confidence 666764 677777655 2 2333 2222 1222222 22 3444 34444433 4668888876 443
No 373
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=60.19 E-value=1.2e+02 Score=29.00 Aligned_cols=133 Identities=8% Similarity=0.084 Sum_probs=83.5
Q ss_pred cEEEEECCCC--cEEEEeecc------CCceEEEEEe---eC----CCeEEEEe-CCCcEEEEECCCCeEEEeec----C
Q 009569 340 AIRRWDVNSG--ECLHVYEKT------GVGLISCGWF---LD----GGGIFAGM-TDKSICLWDLDGRELESWKG----Q 399 (532)
Q Consensus 340 ~i~iwd~~~~--~~~~~~~~~------~~~i~~~~~~---~~----~~~l~~~~-~dg~i~iwd~~~~~~~~~~~----~ 399 (532)
.|.+||+.++ +.++.+.-. ...+..+.+. |+ +.+++.+. ..+.|.++|+.++....... .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6888999998 888777532 3457778877 22 33444444 46789999998766544441 0
Q ss_pred c--------------cCceEEEEEeeC----CCEEEEEECCC-eEEEEE---CCCCc----eeeeecCC---ceeEEEEc
Q 009569 400 K--------------TLRISDMAITDD----GKRIISICREA-AILLLD---REANF----ERWIEEEE---VITSFSLS 450 (532)
Q Consensus 400 ~--------------~~~v~~~~~s~~----~~~l~~~~~dg-~I~iwd---~~~~~----~~~~~~~~---~i~~~~~s 450 (532)
. ...+..|+++|+ ++.|......+ .++-.. +++.. ....+..+ .-..++++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Confidence 0 126788899987 67776665443 343333 12211 33344443 23356675
Q ss_pred -CCCCEEEEEecCCeEEEEecCC
Q 009569 451 -KDNKYLLVNLINQEIHLWSIES 472 (532)
Q Consensus 451 -p~~~~l~~~~~dg~i~iwd~~~ 472 (532)
.+|.++++--..+.|..|+..+
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCCeEEEEeccCCeEEEEeCCC
Confidence 6787777878889999999876
No 374
>1am7_A Lysozyme; glycosidase, transglycosylase, evolution; HET: TRN; 2.30A {Enterobacteria phage lambda} SCOP: d.2.1.4 PDB: 1d9u_A* 3d3d_A*
Probab=58.22 E-value=13 Score=30.58 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=34.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCChhHHHHHHhhccccCc
Q 009569 123 LSDETAVKSASFLILEQKFLELLRRDKVSAALNSLRSEIVPLQ 165 (532)
Q Consensus 123 ~~~~~~~~~~~~~i~~q~~lelle~~~~~~a~~~L~~~l~pl~ 165 (532)
+.++..-+.+.++|.+..+++.+..|++.+|+..|+++++.|.
T Consensus 86 F~P~~QD~~A~~Li~~rgal~~i~~G~i~~a~~~la~~WASLP 128 (158)
T 1am7_A 86 FSPKSQDAVALQQIKERGALPMIDRGDIRQAIDRCSNIXASLP 128 (158)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHTCHHHHHHHHTTTCTTSC
T ss_pred CCHHHHHHHHHHHHHHcCcHHHHHcCCHHHHHHHhccccccCC
Confidence 3444555567888888889999999999999999999886664
No 375
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=56.38 E-value=31 Score=38.81 Aligned_cols=38 Identities=11% Similarity=0.329 Sum_probs=31.8
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEee
Q 009569 319 PVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYE 356 (532)
Q Consensus 319 ~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 356 (532)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455666788899999999999999999999988754
No 376
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=55.86 E-value=2.1e+02 Score=30.41 Aligned_cols=145 Identities=9% Similarity=0.062 Sum_probs=72.0
Q ss_pred cccEEEEEEccC-CCEEEEEeCCCeEEEEEeec-CCeeEEEEEeecC-------CCCeEEEEeCCCC-CEEEEeeCCCc-
Q 009569 272 SDEVWFLQFSHD-GKYLASSSKDQSAIIWEVKE-DGQVSLKHRLSGH-------RKPVFTVSWSPND-HQLLTCGQEEA- 340 (532)
Q Consensus 272 ~~~V~~v~~s~~-g~~las~s~dg~i~iwd~~~-~~~~~~~~~~~~h-------~~~v~~l~~s~~~-~~l~s~~~dg~- 340 (532)
.+.|.+++++|. ...+..++..+.| |.... +..+.. +..+ ...|.++++.|.. ..++.+..+..
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv--~rS~DgG~tW~~---~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~ 88 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGA--YRWDAGTSKWIP---LNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVG 88 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCE--EEEETTTTEEEE---SCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTT
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCE--EEecCCCCCeeE---CccCCCcccccCCceeEEEECCCCCCEEEEEeCccCC
Confidence 458999999995 3455566666654 44433 334433 2222 2469999999843 34444432211
Q ss_pred ---EEEEE-CCCCcEEEEeecc---------CCceEEEEEeeC-CCeEEEEeCCCcEEEEECCCC-eEEEeec-----Cc
Q 009569 341 ---IRRWD-VNSGECLHVYEKT---------GVGLISCGWFLD-GGGIFAGMTDKSICLWDLDGR-ELESWKG-----QK 400 (532)
Q Consensus 341 ---i~iwd-~~~~~~~~~~~~~---------~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~-~~~~~~~-----~~ 400 (532)
-.||. .+.|+.=..+... ...+..++++|. ...++++...+.|.. ..+++ .-..... ..
T Consensus 89 ~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~ 167 (789)
T 1sqj_A 89 DEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTN 167 (789)
T ss_dssp SSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCST
T ss_pred CcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCC
Confidence 23333 3344432222210 012456778774 445666654444332 22221 1111111 11
Q ss_pred cCceEEEEEeeC-CCEEEEEECC
Q 009569 401 TLRISDMAITDD-GKRIISICRE 422 (532)
Q Consensus 401 ~~~v~~~~~s~~-~~~l~~~~~d 422 (532)
...+..+.++|. +..++++..+
T Consensus 168 ~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 168 GIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TTCEEEEEECTTSTTCEEEEESS
T ss_pred CCCeEEEEECCCCCCEEEEEEcC
Confidence 135788999884 4466666654
No 377
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=54.89 E-value=1.2e+02 Score=27.18 Aligned_cols=143 Identities=6% Similarity=-0.057 Sum_probs=79.0
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCC---c---e---ee--eecC
Q 009569 373 GIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREAN---F---E---RW--IEEE 441 (532)
Q Consensus 373 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~---~---~---~~--~~~~ 441 (532)
.+++.+.+|.|+--.................+..+........++..+..|.++-+....- . . .. ....
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~ 83 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPG 83 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCC
Confidence 3455667777765554332111111122235555555555556777788888777654322 1 1 11 2234
Q ss_pred CceeEEEEcCCCCEEEEEecCCeEEEEecCCC------CcceeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEe
Q 009569 442 EVITSFSLSKDNKYLLVNLINQEIHLWSIESD------PKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFL 515 (532)
Q Consensus 442 ~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~ 515 (532)
..|.++....++.+|+..+..|.++...+... +..+..+..... ++.+.....++..|+..+.+|.+..+.
T Consensus 84 e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~---lv~~~~~~~~~~~i~l~T~~G~~lrf~ 160 (256)
T 1zvt_A 84 ATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAH---VMPPVVIEDASDMLLAITQAGRMLMFP 160 (256)
T ss_dssp CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCC---BCCCEECCCTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCE---EEEEEEecCCCCEEEEEcCCCeEEEEE
Confidence 56766644346677888999999999887432 122223332221 222222112345788889999998888
Q ss_pred CCC
Q 009569 516 SFS 518 (532)
Q Consensus 516 ~~~ 518 (532)
...
T Consensus 161 ~~e 163 (256)
T 1zvt_A 161 VSD 163 (256)
T ss_dssp GGG
T ss_pred HHH
Confidence 754
No 378
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=51.76 E-value=44 Score=34.31 Aligned_cols=58 Identities=12% Similarity=0.153 Sum_probs=43.2
Q ss_pred eEEEEeCCCCCEEEEeeCC------------CcEEEEECCCCcEEEEeecc-CCceEEEEEeeCCCeEEEE
Q 009569 320 VFTVSWSPNDHQLLTCGQE------------EAIRRWDVNSGECLHVYEKT-GVGLISCGWFLDGGGIFAG 377 (532)
Q Consensus 320 v~~l~~s~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~ 377 (532)
.-.|+|+|.|.+++.-..+ ..+.+.+..+++..+.+..+ ...++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4568999999876664432 24666777788877766655 6789999999999888775
No 379
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=50.96 E-value=1.7e+02 Score=27.85 Aligned_cols=190 Identities=14% Similarity=0.069 Sum_probs=110.6
Q ss_pred ccCCCEEEEEeCCCeEEEEEeec------CCeeEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEEC---CC---
Q 009569 281 SHDGKYLASSSKDQSAIIWEVKE------DGQVSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDV---NS--- 348 (532)
Q Consensus 281 s~~g~~las~s~dg~i~iwd~~~------~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~---~~--- 348 (532)
-|+..++++.+.+|.|+--.+.+ ++.-.....+.. ...+..+........|+..+..|.++-+.. ..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 46777899999999998765432 111112233333 344555555555566777777787665543 21
Q ss_pred ---CcEEE---EeeccCCceEEEEEee---CCCeEEEEeCCCcEEEEECCC------CeEEEeecCccCceEEEEEeeCC
Q 009569 349 ---GECLH---VYEKTGVGLISCGWFL---DGGGIFAGMTDKSICLWDLDG------RELESWKGQKTLRISDMAITDDG 413 (532)
Q Consensus 349 ---~~~~~---~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~------~~~~~~~~~~~~~v~~~~~s~~~ 413 (532)
|..+. .+. ....|.++.... ++.+++.++..|.++...+.. .-+..+.......+..+......
T Consensus 83 ~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~ 161 (370)
T 3l6v_A 83 NARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGD 161 (370)
T ss_dssp TSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSC
T ss_pred ccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCC
Confidence 22211 122 244566654432 456899999999999988642 11222222223356666665566
Q ss_pred CEEEEEECCCeEEEEECCCCc--------eee--eecCCceeEEEEcC--------------------------------
Q 009569 414 KRIISICREAAILLLDREANF--------ERW--IEEEEVITSFSLSK-------------------------------- 451 (532)
Q Consensus 414 ~~l~~~~~dg~I~iwd~~~~~--------~~~--~~~~~~i~~~~~sp-------------------------------- 451 (532)
..++..+.+|.+..++...-. ... ......|.++...+
T Consensus 162 ~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~ 241 (370)
T 3l6v_A 162 RDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVA 241 (370)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC------------------------------
T ss_pred ceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccc
Confidence 678888999998888764321 111 12334555555444
Q ss_pred ---CCCEEEEEecCCeEEEEecCC
Q 009569 452 ---DNKYLLVNLINQEIHLWSIES 472 (532)
Q Consensus 452 ---~~~~l~~~~~dg~i~iwd~~~ 472 (532)
++..+++.+..|..+...+..
T Consensus 242 ~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 242 DNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp -----CEEEEEETTSEEEEEEGGG
T ss_pred cccCCceEEEeeCCCCEEEEEHHH
Confidence 456889999999988888753
No 380
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=50.36 E-value=1.5e+02 Score=27.20 Aligned_cols=232 Identities=9% Similarity=0.033 Sum_probs=123.0
Q ss_pred cCCCEEEEEeCCCeEEEEEeecCCe------eEEEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEEEEC---CC----
Q 009569 282 HDGKYLASSSKDQSAIIWEVKEDGQ------VSLKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRRWDV---NS---- 348 (532)
Q Consensus 282 ~~g~~las~s~dg~i~iwd~~~~~~------~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~---~~---- 348 (532)
|+..++++.+.+|.|+--.+.+-.. -.....+..+ ..+..+........|+..+..|.++-... ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 3556788888999887665542100 0001112222 23333333334556666677777555544 22
Q ss_pred --CcEEE---EeeccCCceEEEEEe---eCCCeEEEEeCCCcEEEEECCC------CeEEEeecCccCceEEEEEeeCCC
Q 009569 349 --GECLH---VYEKTGVGLISCGWF---LDGGGIFAGMTDKSICLWDLDG------RELESWKGQKTLRISDMAITDDGK 414 (532)
Q Consensus 349 --~~~~~---~~~~~~~~i~~~~~~---~~~~~l~~~~~dg~i~iwd~~~------~~~~~~~~~~~~~v~~~~~s~~~~ 414 (532)
|..+. .+. ....|.++... .++.+++..+.+|.++...+.. .-...+.....+.+..+....+..
T Consensus 80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGED 158 (307)
T ss_dssp SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTC
T ss_pred CCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCC
Confidence 22211 122 23456655443 3566788999999999987641 112222111223566666655566
Q ss_pred EEEEEECCCeEEEEECCCCc--------eee--eecCCceeEEEEcCCCCEEEEEecCCeEEEEecCCCC------c--c
Q 009569 415 RIISICREAAILLLDREANF--------ERW--IEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDP------K--L 476 (532)
Q Consensus 415 ~l~~~~~dg~I~iwd~~~~~--------~~~--~~~~~~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~------~--~ 476 (532)
.++..+.+|.+..++...-. ... ......|.++...+++..+++.+..|.++-.++.... + .
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~ 238 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVI 238 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEE
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEE
Confidence 78888999998888864321 111 2234556677655566778888999999888874320 1 1
Q ss_pred eeEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 477 VSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 477 ~~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
...+...... ++.+.... +..-|+..+.+|.+.-+.+..
T Consensus 239 ~~~~~~~~~~--lv~~~~v~-~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 239 SIKVTERNGL--VVGAVQVD-DCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp SSCCCTTTCS--EEEEEEEC-TTCEEEEEESSCCEEEEEGGG
T ss_pred eeEecCCCCe--EEEEEEeC-CCceEEEEcCCCcEEEEeccc
Confidence 1112211122 22222212 334456677788877776654
No 381
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=50.04 E-value=58 Score=33.19 Aligned_cols=59 Identities=20% Similarity=0.233 Sum_probs=42.2
Q ss_pred ceEEEEEeeCCCEEEEEEC------------CCeEEEEECCCCc-eeeee--cCCceeEEEEcCCCCEEEEEec
Q 009569 403 RISDMAITDDGKRIISICR------------EAAILLLDREANF-ERWIE--EEEVITSFSLSKDNKYLLVNLI 461 (532)
Q Consensus 403 ~v~~~~~s~~~~~l~~~~~------------dg~I~iwd~~~~~-~~~~~--~~~~i~~~~~sp~~~~l~~~~~ 461 (532)
....|+|+++|.+.++... ...+..++..+++ ..+.. ....++.++|+||++.|+++-.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 5678999999987774332 1267777777776 33332 2457899999999999988753
No 382
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=49.35 E-value=43 Score=34.37 Aligned_cols=58 Identities=21% Similarity=0.266 Sum_probs=40.6
Q ss_pred ceEEEEEeeCCCEEEEEECC------------CeEEEEECCCCc-eeee--ecCCceeEEEEcCCCCEEEEEe
Q 009569 403 RISDMAITDDGKRIISICRE------------AAILLLDREANF-ERWI--EEEEVITSFSLSKDNKYLLVNL 460 (532)
Q Consensus 403 ~v~~~~~s~~~~~l~~~~~d------------g~I~iwd~~~~~-~~~~--~~~~~i~~~~~sp~~~~l~~~~ 460 (532)
..-.|+|+|.|.++++-..+ ..+.+.+..+++ ..+. .....++.++|+||++.|+++-
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 35779999999966664432 246666666666 2222 3457899999999999988764
No 383
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=48.67 E-value=1.1e+02 Score=27.82 Aligned_cols=88 Identities=18% Similarity=0.197 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHhcC-hHHHHHHHhh--hcCcccCCHHHHHH--HHHHhcCChHHHHHHhhcCCCCChhHHHHHHHHHH
Q 009569 63 KSEFIKIITRALYSLG-YDKSGALLEE--ESGIPMHSSVVNQF--MQQVMDGYWDESIITLHMIGLSDETAVKSASFLIL 137 (532)
Q Consensus 63 ~~e~~~lI~q~L~e~G-~~~sa~~L~~--Es~i~~~~~~~~~~--~~~i~~G~w~~~~~~l~~l~~~~~~~~~~~~~~i~ 137 (532)
.-+.++++.+++...| +..+...|++ +.++.-+.+.+... .-....|++++|+..+++ +.... + +..+
T Consensus 64 ~~~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~---~~~~~---~-~~~l 136 (291)
T 3mkr_A 64 ELQAVRMFAEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ---GDSLE---C-MAMT 136 (291)
T ss_dssp HHHHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT---CCSHH---H-HHHH
T ss_pred hHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC---CCCHH---H-HHHH
Confidence 4567788888888887 7777777776 33333333333222 334578999999999988 22111 1 1111
Q ss_pred HHHHHHHHhcCChhHHHHHHhhc
Q 009569 138 EQKFLELLRRDKVSAALNSLRSE 160 (532)
Q Consensus 138 ~q~~lelle~~~~~~a~~~L~~~ 160 (532)
..-++..|+..+|...+++-
T Consensus 137 ---~~~~~~~g~~~~A~~~l~~~ 156 (291)
T 3mkr_A 137 ---VQILLKLDRLDLARKELKKM 156 (291)
T ss_dssp ---HHHHHHTTCHHHHHHHHHHH
T ss_pred ---HHHHHHCCCHHHHHHHHHHH
Confidence 11233457778888777754
No 384
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=46.13 E-value=47 Score=37.31 Aligned_cols=37 Identities=11% Similarity=0.226 Sum_probs=30.3
Q ss_pred ceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEE
Q 009569 443 VITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRY 480 (532)
Q Consensus 443 ~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 480 (532)
.+.+++..++..++++-+.|+++++|++.++ +++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~-~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN-QCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTT-EEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCC-CeEEee
Confidence 3455667778899999999999999999988 666664
No 385
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=44.99 E-value=72 Score=27.65 Aligned_cols=84 Identities=19% Similarity=0.190 Sum_probs=55.5
Q ss_pred HHHHHHHHHhcCCh--------------HHHHHHhhcC---CCCChhHHHHHHHHHHHHHHHHHHhcCChhHHHHHHhhc
Q 009569 98 VVNQFMQQVMDGYW--------------DESIITLHMI---GLSDETAVKSASFLILEQKFLELLRRDKVSAALNSLRSE 160 (532)
Q Consensus 98 ~~~~~~~~i~~G~w--------------~~~~~~l~~l---~~~~~~~~~~~~~~i~~q~~lelle~~~~~~a~~~L~~~ 160 (532)
.+-+|...|.+|+= ..|+..+..+ ...++.....+.-+|.+|-.+=.++++++.+|..+|+..
T Consensus 61 ri~QfLsRI~eG~~LD~~Fd~~~~lTPLESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~ 140 (235)
T 3bu8_A 61 RVMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKH 140 (235)
T ss_dssp HHHHHHHHHHTTTCTTEECSSSTTCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcccCCCCCCChHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 35566666666641 2244444443 345567888899999999999999999999999999977
Q ss_pred cccCccChhhHHHhhhccccC
Q 009569 161 IVPLQINMSRVHELASCIISP 181 (532)
Q Consensus 161 l~pl~~~~~~~~~l~~~l~~~ 181 (532)
+.--..++.--..|..++.+.
T Consensus 141 ~~~~~s~~kLr~kL~~II~~K 161 (235)
T 3bu8_A 141 MSKDPTTQKLRNDLLNIIREK 161 (235)
T ss_dssp STTCGGGHHHHHHHHHHHHHT
T ss_pred hcCCCCchHHHHHHHHHHhcc
Confidence 654222333334555555544
No 386
>2xz2_A CSTF-50, isoform B; RNA-binding protein, 3' END mRNA maturation, transcription; 1.40A {Drosophila melanogaster}
Probab=44.73 E-value=16 Score=24.85 Aligned_cols=39 Identities=10% Similarity=0.127 Sum_probs=31.2
Q ss_pred cccCCc-chHHHHHHHHHHHHhcChHHHHHHHhhhcCccc
Q 009569 56 GSKGVI-KKSEFIKIITRALYSLGYDKSGALLEEESGIPM 94 (532)
Q Consensus 56 ~~~~~i-~~~e~~~lI~q~L~e~G~~~sa~~L~~Es~i~~ 94 (532)
+.+..| +|+.+.|||.--|.=-||..-|..|..+-+..-
T Consensus 8 ~~~~~iK~Re~LYrLIISQL~YDG~~~iA~~L~~~v~~~~ 47 (66)
T 2xz2_A 8 DPSNLVKNREILYRLMISQLMYDGLEKFAMELSMLVKADQ 47 (66)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCCC
T ss_pred CchhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCC
Confidence 444444 588889999999999999999999999877443
No 387
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=43.64 E-value=1e+02 Score=31.47 Aligned_cols=61 Identities=11% Similarity=0.156 Sum_probs=44.4
Q ss_pred CCeEEEEeCCCCCEEEEeeC------------CCcEEEEECCCCcEEEEeecc-CCceEEEEEeeCCCeEEEEe
Q 009569 318 KPVFTVSWSPNDHQLLTCGQ------------EEAIRRWDVNSGECLHVYEKT-GVGLISCGWFLDGGGIFAGM 378 (532)
Q Consensus 318 ~~v~~l~~s~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~ 378 (532)
.....|.|.++|.+.+.... ...|..++..+++....+... ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34568999999987774322 125777777788876666543 46789999999999988764
No 388
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=43.54 E-value=2e+02 Score=26.51 Aligned_cols=158 Identities=13% Similarity=0.095 Sum_probs=92.4
Q ss_pred ccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeEE---------EEEeecCCCCeEEEEeCC---CCCEEEEeeCCCc
Q 009569 273 DEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVSL---------KHRLSGHRKPVFTVSWSP---NDHQLLTCGQEEA 340 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~~---------~~~~~~h~~~v~~l~~s~---~~~~l~s~~~dg~ 340 (532)
+.+..+........++..+..|.++-.....-..... ...+.. ...|.++...+ ++.+++..+..|.
T Consensus 47 D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~ 125 (312)
T 1suu_A 47 DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGK 125 (312)
T ss_dssp CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCe
Confidence 3444555555556677777888877766542100000 001111 23344443322 4567888899999
Q ss_pred EEEEECCC-------CcEEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC--------CeEEEeecCccCceE
Q 009569 341 IRRWDVNS-------GECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG--------RELESWKGQKTLRIS 405 (532)
Q Consensus 341 i~iwd~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~~~~~v~ 405 (532)
++...+.. |.....+.. .+.+..+....++..++..+.+|.+..+.... .-+..+.......|.
T Consensus 126 ~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv 204 (312)
T 1suu_A 126 IARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFV 204 (312)
T ss_dssp EEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEE
T ss_pred EEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEE
Confidence 99888732 222222333 45566666655567788899999998887742 111222222233666
Q ss_pred EEEEeeCCCEEEEEECCCeEEEEECCC
Q 009569 406 DMAITDDGKRIISICREAAILLLDREA 432 (532)
Q Consensus 406 ~~~~s~~~~~l~~~~~dg~I~iwd~~~ 432 (532)
.+..-.++..+++.+..|..+..++..
T Consensus 205 ~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 205 KVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEECCCCeEEEEECCCceEEEEHHH
Confidence 666655667788889999999988754
No 389
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=42.70 E-value=1.8e+02 Score=25.87 Aligned_cols=141 Identities=9% Similarity=0.004 Sum_probs=75.1
Q ss_pred EEEEeeCCCcEEEEECCCCcE-EEEeeccCCceEEEEEeeCCCeEEEEeCCCcEEEEECC---C----Ce-EEEe-ecCc
Q 009569 331 QLLTCGQEEAIRRWDVNSGEC-LHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLD---G----RE-LESW-KGQK 400 (532)
Q Consensus 331 ~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~---~----~~-~~~~-~~~~ 400 (532)
.+++.+.+|.|+--....... ...+.. ...+..+........++..+..|.++-+... . +. +... .-..
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke-~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKA-GDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPP 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCT-TCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCC
Confidence 344556666665544322110 001222 2334444444445566667777876655432 1 11 0001 1112
Q ss_pred cCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc------eee--eecCCceeEEEEc-CCCCEEEEEecCCeEEEEecC
Q 009569 401 TLRISDMAITDDGKRIISICREAAILLLDREANF------ERW--IEEEEVITSFSLS-KDNKYLLVNLINQEIHLWSIE 471 (532)
Q Consensus 401 ~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~------~~~--~~~~~~i~~~~~s-p~~~~l~~~~~dg~i~iwd~~ 471 (532)
...|.++....++.+++.++..|.++...+.... ... ......+..+... .++..++..+.+|.+..+++.
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 2367776443456778889999999999874421 111 1223445555555 345678888889998888875
Q ss_pred C
Q 009569 472 S 472 (532)
Q Consensus 472 ~ 472 (532)
.
T Consensus 163 e 163 (256)
T 1zvt_A 163 D 163 (256)
T ss_dssp G
T ss_pred H
Confidence 4
No 390
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=42.20 E-value=41 Score=35.24 Aligned_cols=37 Identities=16% Similarity=0.312 Sum_probs=30.4
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEECCCCcEEEEeec
Q 009569 319 PVFTVSWSPNDHQLLTCGQEEAIRRWDVNSGECLHVYEK 357 (532)
Q Consensus 319 ~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 357 (532)
.|.++.+ +..++++-+.|+++++|++.+++++....-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555555 477999999999999999999998887664
No 391
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=39.68 E-value=12 Score=27.06 Aligned_cols=32 Identities=13% Similarity=0.125 Sum_probs=28.2
Q ss_pred cchHHHHHHHHHHHHhcChHHHHHHHhhhcCccc
Q 009569 61 IKKSEFIKIITRALYSLGYDKSGALLEEESGIPM 94 (532)
Q Consensus 61 i~~~e~~~lI~q~L~e~G~~~sa~~L~~Es~i~~ 94 (532)
++..++.+-|+++|++.| .|+..|.++-|++-
T Consensus 13 ~~~~~~~~~IL~lL~~~g--~sa~eLAk~LgiSk 44 (82)
T 1oyi_A 13 RSNAEIVCEAIKTIGIEG--ATAAQLTRQLNMEK 44 (82)
T ss_dssp CCSHHHHHHHHHHHSSST--EEHHHHHHHSSSCH
T ss_pred cchHHHHHHHHHHHHHcC--CCHHHHHHHHCcCH
Confidence 567789999999999999 89999999988765
No 392
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=37.82 E-value=1.2e+02 Score=29.87 Aligned_cols=26 Identities=31% Similarity=0.386 Sum_probs=23.2
Q ss_pred cccccCCcchHHHHHHHHHHHHhcCh
Q 009569 54 KIGSKGVIKKSEFIKIITRALYSLGY 79 (532)
Q Consensus 54 ~~~~~~~i~~~e~~~lI~q~L~e~G~ 79 (532)
.+|..+....-|++.|+.+.|.+.|+
T Consensus 153 i~G~~~~~~DaEvi~l~~~~l~~lgl 178 (456)
T 3lc0_A 153 IVGVKSVSAEVELVCAACWAMRSLGL 178 (456)
T ss_dssp EESCCSTHHHHHHHHHHHHHHHHTTC
T ss_pred EEcCCChHhhHHHHHHHHHHHHHcCC
Confidence 57888877778999999999999998
No 393
>1kdl_A YOPD protein; yersinia, amphipathic alpha helix, beta turn, structural protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=37.56 E-value=16 Score=19.43 Aligned_cols=14 Identities=14% Similarity=0.349 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHhc
Q 009569 64 SEFIKIITRALYSL 77 (532)
Q Consensus 64 ~e~~~lI~q~L~e~ 77 (532)
+||++||.||-++.
T Consensus 5 kDvlql~qQy~qsh 18 (26)
T 1kdl_A 5 KDVLRLIEQYVSSH 18 (26)
T ss_dssp HHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHH
Confidence 58999999997654
No 394
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=37.16 E-value=2.8e+02 Score=26.31 Aligned_cols=195 Identities=10% Similarity=0.124 Sum_probs=106.5
Q ss_pred ccEEEEEEccCCCEEEEEeCCCeEEEEEeecCCe--------eEEEEEeec-CCCCeEEEEeCCCCCEEEEeeCCCcEEE
Q 009569 273 DEVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQ--------VSLKHRLSG-HRKPVFTVSWSPNDHQLLTCGQEEAIRR 343 (532)
Q Consensus 273 ~~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~--------~~~~~~~~~-h~~~v~~l~~s~~~~~l~s~~~dg~i~i 343 (532)
..+..++.+......+.-..||.|+.|-....++ ......+.. ....|..++.. ....+....+|.|+.
T Consensus 105 ~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~ 182 (389)
T 3kci_A 105 VFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYT 182 (389)
T ss_dssp SCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEE
T ss_pred CceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEE
Confidence 3455667777666666677899999997653221 111122222 22356666654 345555667899999
Q ss_pred EECCCC-c----------EEEEeec-cCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC----------C--eEEEeecC
Q 009569 344 WDVNSG-E----------CLHVYEK-TGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG----------R--ELESWKGQ 399 (532)
Q Consensus 344 wd~~~~-~----------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~----------~--~~~~~~~~ 399 (532)
|-.... + ....+.. ....|..++......+.++-..||.|+.|-... . ........
T Consensus 183 wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~ 262 (389)
T 3kci_A 183 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 262 (389)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGG
T ss_pred eCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEeccc
Confidence 975321 1 1111111 233466665543335666677899999997542 0 11111111
Q ss_pred ccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc------------eeeee--cCCceeEEEEcCCCCEEEEEecCCeE
Q 009569 400 KTLRISDMAITDDGKRIISICREAAILLLDREANF------------ERWIE--EEEVITSFSLSKDNKYLLVNLINQEI 465 (532)
Q Consensus 400 ~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~------------~~~~~--~~~~i~~~~~sp~~~~l~~~~~dg~i 465 (532)
....|..++.. ....++-..+|.|+.|-....- ..... ....|..++.. ..+.++-..||.|
T Consensus 263 ~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v 338 (389)
T 3kci_A 263 TGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEV 338 (389)
T ss_dssp TTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTCCE
T ss_pred CCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECCCCCE
Confidence 22246655554 3455566789999999764311 11111 12335555543 4455556779999
Q ss_pred EEEecCCC
Q 009569 466 HLWSIESD 473 (532)
Q Consensus 466 ~iwd~~~~ 473 (532)
+.|=....
T Consensus 339 ~~wG~n~~ 346 (389)
T 3kci_A 339 YTWGDNDE 346 (389)
T ss_dssp EEEECCTT
T ss_pred EEeeCCCC
Confidence 99976544
No 395
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=35.73 E-value=1.1e+02 Score=23.32 Aligned_cols=85 Identities=9% Similarity=-0.040 Sum_probs=46.8
Q ss_pred HHHHHhcChHHHHHHHhhhcCcccCCHHHHH--HHHHHhcCChHHHHHHhhcC-CCCChhHHHHHHHHHHHHHHHHHHhc
Q 009569 71 TRALYSLGYDKSGALLEEESGIPMHSSVVNQ--FMQQVMDGYWDESIITLHMI-GLSDETAVKSASFLILEQKFLELLRR 147 (532)
Q Consensus 71 ~q~L~e~G~~~sa~~L~~Es~i~~~~~~~~~--~~~~i~~G~w~~~~~~l~~l-~~~~~~~~~~~~~~i~~q~~lelle~ 147 (532)
..|++.--|.++...+++=-.+.-+.+.+-. =.-....|+|++|+..+.+. .+.+... . .+...-.-+...
T Consensus 21 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-~-----a~~~lg~~~~~~ 94 (126)
T 4gco_A 21 NEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFI-K-----GYIRKAACLVAM 94 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-H-----HHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhh-H-----HHHHHHHHHHHC
Confidence 3455566688888877765333333332211 12334679999999887753 2222111 1 111111223455
Q ss_pred CChhHHHHHHhhcc
Q 009569 148 DKVSAALNSLRSEI 161 (532)
Q Consensus 148 ~~~~~a~~~L~~~l 161 (532)
+++.+|+..+++-+
T Consensus 95 ~~~~~A~~~~~~al 108 (126)
T 4gco_A 95 REWSKAQRAYEDAL 108 (126)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 88889998888654
No 396
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=34.77 E-value=1.2e+02 Score=25.79 Aligned_cols=84 Identities=13% Similarity=0.111 Sum_probs=58.6
Q ss_pred HHHHHHHHHhcCC--------------hHHHHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHhcCChhHHHHHHhhcccc
Q 009569 98 VVNQFMQQVMDGY--------------WDESIITLHMIGLSDETAVKSASFLILEQKFLELLRRDKVSAALNSLRSEIVP 163 (532)
Q Consensus 98 ~~~~~~~~i~~G~--------------w~~~~~~l~~l~~~~~~~~~~~~~~i~~q~~lelle~~~~~~a~~~L~~~l~p 163 (532)
.+-+|...|.+|+ -..|+..+..++-..+.+.....-+|.+|-..=.+++|++.+|..+|+..+..
T Consensus 67 ~icQfL~RI~eG~~LD~~Fd~d~~lTPLESAl~v~~~I~~e~~~lheei~~Llk~qAV~VCiekg~Fk~A~eiLkr~f~~ 146 (211)
T 3bqo_A 67 YICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEAEEVFERIFGD 146 (211)
T ss_dssp HHHHHHHHHHTTTCTTEECSSSTTCCHHHHHHHHHTTSCSCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHcCCCCCCccCCCCCCChHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcC
Confidence 3667777887775 23578888888655557888889999999999999999999999999976544
Q ss_pred CccChhhHHHhhhccccC
Q 009569 164 LQINMSRVHELASCIISP 181 (532)
Q Consensus 164 l~~~~~~~~~l~~~l~~~ 181 (532)
-..++.--..|..++.+.
T Consensus 147 ~~~~~~lr~kL~~II~~K 164 (211)
T 3bqo_A 147 PNSHMPFKSKLLMIISQK 164 (211)
T ss_dssp ---CCTTHHHHHHHHHTT
T ss_pred CCCchHHHHHHHHHHHcc
Confidence 433333334444444443
No 397
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=34.65 E-value=17 Score=24.81 Aligned_cols=23 Identities=30% Similarity=0.556 Sum_probs=19.1
Q ss_pred CCcchHHHHHHHHHHHHhcChHH
Q 009569 59 GVIKKSEFIKIITRALYSLGYDK 81 (532)
Q Consensus 59 ~~i~~~e~~~lI~q~L~e~G~~~ 81 (532)
+.-...|++.||.+.|+.+||+.
T Consensus 58 ndeqakelleliarllqklgykd 80 (96)
T 2jvf_A 58 NDEQAKELLELIARLLQKLGYKD 80 (96)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSE
T ss_pred ChHHHHHHHHHHHHHHHHhCCCc
Confidence 33356799999999999999974
No 398
>2k9m_A RNA polymerase sigma factor RPON; core binding domain, transcription; NMR {Aquifex aeolicus}
Probab=33.60 E-value=29 Score=27.53 Aligned_cols=85 Identities=16% Similarity=0.080 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhcChH-HHHHHHhhhcCcccCCHHHHHHHHHHhcCChHHHHHHhhcCCCCC--hhHHHHHHHHHHHH-
Q 009569 64 SEFIKIITRALYSLGYD-KSGALLEEESGIPMHSSVVNQFMQQVMDGYWDESIITLHMIGLSD--ETAVKSASFLILEQ- 139 (532)
Q Consensus 64 ~e~~~lI~q~L~e~G~~-~sa~~L~~Es~i~~~~~~~~~~~~~i~~G~w~~~~~~l~~l~~~~--~~~~~~~~~~i~~q- 139 (532)
.++...|...|.+.||- .+...+.++.|+..+ .+..|+..++.+..+- ....+.++.+..++
T Consensus 22 ~~ia~~iI~~LD~~GYL~~~l~eia~~l~~~~~--------------eve~vL~~iQ~~dP~GVgArdL~ECLllQL~~~ 87 (130)
T 2k9m_A 22 QELALELLNYLNEKGFLSKSVEEISDVLRCSVE--------------ELEKVRQKVLRLEPLGVCSKDVWEFLELQIEEI 87 (130)
T ss_dssp HHHHHHHTTSBCTTSSBSSCHHHHHHHTTCCHH--------------HHHHHHHHHHTSSSCCTTTSCTTHHHHHHHHHS
T ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHcCCCHH--------------HHHHHHHHHhcCCCCccccCCHHHHHHHHHhcC
Confidence 46777788888999985 344445555443222 2344555666653221 11222333333332
Q ss_pred ---------HHHH-HHhcCCh-hHHHHHHhhcccc
Q 009569 140 ---------KFLE-LLRRDKV-SAALNSLRSEIVP 163 (532)
Q Consensus 140 ---------~~le-lle~~~~-~~a~~~L~~~l~p 163 (532)
.+++ ++.++++ .+|+.++| .+.|
T Consensus 88 ~~~a~~ii~~~l~~~la~~~~~~~~~~~Ir-~L~P 121 (130)
T 2k9m_A 88 YPEEEEILKKALRDLKRGKKLKPEIKGKLS-RLRL 121 (130)
T ss_dssp CSTTHHHHHHHHHHHHHSCCCCHHHHHHHH-TCCS
T ss_pred chhHHHHHHHhHHHHHHcCCHHHHHHHHHH-cCCC
Confidence 3456 6666665 45666666 4544
No 399
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=33.51 E-value=3.3e+02 Score=26.07 Aligned_cols=107 Identities=7% Similarity=0.065 Sum_probs=60.2
Q ss_pred CCeEEEEeCCCCCEEEEeeCCCcEEEEECCCC-c------------EEEEeeccCCceEEEEEeeCCCeEEEEeCCCcEE
Q 009569 318 KPVFTVSWSPNDHQLLTCGQEEAIRRWDVNSG-E------------CLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSIC 384 (532)
Q Consensus 318 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~-~------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 384 (532)
..|..|+.. +.+.+....||.|+.|-.... + ....+. ....|..++. ...+.++-..||.|+
T Consensus 75 ~~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~--G~~hs~al~~~G~v~ 149 (423)
T 3mvd_K 75 PDAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISA--GDSHSACLLEDGRVF 149 (423)
T ss_dssp SSEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEE--CSSEEEEEETTSCEE
T ss_pred CCceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEc--CcCeEEEEeCCCeEE
Confidence 346666654 445666678899999975321 1 011111 1234555544 345556667889999
Q ss_pred EEEC--CC-CeE---------EEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECC
Q 009569 385 LWDL--DG-REL---------ESWKGQKTLRISDMAITDDGKRIISICREAAILLLDRE 431 (532)
Q Consensus 385 iwd~--~~-~~~---------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~ 431 (532)
.|-. .. +++ ..........|..++.. ....++...+|.|+.|-..
T Consensus 150 ~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n 206 (423)
T 3mvd_K 150 AWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG--ADHLVILTTAGKVFTVGCA 206 (423)
T ss_dssp EEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC--SSEEEEEETTSCEEEEECC
T ss_pred EEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC--CCeEEEEecCCeEEEeeCC
Confidence 9985 21 221 11111222256666654 3466666789999999643
No 400
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=30.89 E-value=3.6e+02 Score=25.72 Aligned_cols=146 Identities=10% Similarity=0.147 Sum_probs=78.3
Q ss_pred ccEEEEEEc---cC----CCEEEEE-eCCCeEEEEEeecCCeeEEEEEe-----------ecC----CCCeEEEEeCCC-
Q 009569 273 DEVWFLQFS---HD----GKYLASS-SKDQSAIIWEVKEDGQVSLKHRL-----------SGH----RKPVFTVSWSPN- 328 (532)
Q Consensus 273 ~~V~~v~~s---~~----g~~las~-s~dg~i~iwd~~~~~~~~~~~~~-----------~~h----~~~v~~l~~s~~- 328 (532)
..+..+++. |+ +.++..+ +..+-|.|+|+.++..++..+.. .+. ...|..++.+|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 456777776 22 3343333 35678999999877555433211 010 236788899987
Q ss_pred ---CCEEEEeeCCCcEEEEECC-----CC---cEEEEeeccC--CceEEEEEe-eCCCeEEEEeCCCcEEEEECCC-C--
Q 009569 329 ---DHQLLTCGQEEAIRRWDVN-----SG---ECLHVYEKTG--VGLISCGWF-LDGGGIFAGMTDKSICLWDLDG-R-- 391 (532)
Q Consensus 329 ---~~~l~s~~~dg~i~iwd~~-----~~---~~~~~~~~~~--~~i~~~~~~-~~~~~l~~~~~dg~i~iwd~~~-~-- 391 (532)
++.|.-....+. ++|.+. .. ..++.+-... ..-..++.. .+|..+++--..+.|..|+..+ .
T Consensus 232 ~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~ 310 (381)
T 3q6k_A 232 SEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLR 310 (381)
T ss_dssp TTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBC
T ss_pred CCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccc
Confidence 677766655442 233321 11 1222221111 233345565 4676677777788899999876 1
Q ss_pred --eEEEe-ecCccCceEEEEEeeCCCEEEEE
Q 009569 392 --ELESW-KGQKTLRISDMAITDDGKRIISI 419 (532)
Q Consensus 392 --~~~~~-~~~~~~~v~~~~~s~~~~~l~~~ 419 (532)
....+ ....-..+..+++.++|.+.+.+
T Consensus 311 ~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 311 MKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp GGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred cCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 11221 11222356777776666554444
No 401
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=30.37 E-value=50 Score=21.55 Aligned_cols=21 Identities=14% Similarity=0.257 Sum_probs=16.0
Q ss_pred cchHHHHHHHHHHHHhcChHH
Q 009569 61 IKKSEFIKIITRALYSLGYDK 81 (532)
Q Consensus 61 i~~~e~~~lI~q~L~e~G~~~ 81 (532)
+..+|...-.++-|+|+||..
T Consensus 3 ~~~ee~~a~~L~~L~eMGF~D 23 (54)
T 2cp8_A 3 SGSSGQTAALMAHLFEMGFCD 23 (54)
T ss_dssp CSSCTTHHHHHHHHHHHTCCC
T ss_pred CCHHHhhHHHHHHHHHcCCCc
Confidence 455666777889999999944
No 402
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=29.77 E-value=1.7e+02 Score=21.56 Aligned_cols=95 Identities=6% Similarity=-0.103 Sum_probs=57.1
Q ss_pred cchHHHHHHHHHHHHhcChHHHHHHHhhhcCcccCCHHHHHH--HHHHhcCChHHHHHHhhcC-CCCChhHHHHHHHHHH
Q 009569 61 IKKSEFIKIITRALYSLGYDKSGALLEEESGIPMHSSVVNQF--MQQVMDGYWDESIITLHMI-GLSDETAVKSASFLIL 137 (532)
Q Consensus 61 i~~~e~~~lI~q~L~e~G~~~sa~~L~~Es~i~~~~~~~~~~--~~~i~~G~w~~~~~~l~~l-~~~~~~~~~~~~~~i~ 137 (532)
-+-..+..+-..++...-|.++...+++=..+.-+...+-.. .-....|+|++|+..+.+. ...+... .+ +
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~----~ 87 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFI--KG----Y 87 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCH--HH----H
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCch--HH----H
Confidence 356677777777777778899888888765554444322221 2235689999999888764 2212110 11 1
Q ss_pred HHHHHHHHhcCChhHHHHHHhhcc
Q 009569 138 EQKFLELLRRDKVSAALNSLRSEI 161 (532)
Q Consensus 138 ~q~~lelle~~~~~~a~~~L~~~l 161 (532)
...-.-+...+++.+|+..+++-+
T Consensus 88 ~~la~~~~~~~~~~~A~~~~~~~~ 111 (133)
T 2lni_A 88 TRKAAALEAMKDYTKAMDVYQKAL 111 (133)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 111112335588899998888654
No 403
>2j4b_A TAF5, transcription initiation factor TFIID subunit 72/ kDa; WD repeat; 2.5A {Encephalitozoon cuniculi} SCOP: d.379.1.1
Probab=29.77 E-value=79 Score=25.27 Aligned_cols=49 Identities=8% Similarity=0.145 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhHHHHHHhhccccCccChhhHHHhhh
Q 009569 128 AVKSASFLILEQKFLELLRRDKVSAALNSLRSEIVPLQINMSRVHELAS 176 (532)
Q Consensus 128 ~~~~~~~~i~~q~~lelle~~~~~~a~~~L~~~l~pl~~~~~~~~~l~~ 176 (532)
....++|-+.-+-|++|+..+..++|..++.+--.-+....+.+..|+.
T Consensus 29 EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~~~~i~~L~~ 77 (138)
T 2j4b_A 29 DLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDHYNKSEEIKQFES 77 (138)
T ss_dssp HHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC--CHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHhHHHhhHHHHHHHHhc
Confidence 3445789999999999999999999999998543222222445555544
No 404
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=27.44 E-value=6.3e+02 Score=27.47 Aligned_cols=38 Identities=11% Similarity=0.231 Sum_probs=32.2
Q ss_pred ceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEe
Q 009569 443 VITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYK 481 (532)
Q Consensus 443 ~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 481 (532)
.+.+++..++..++++-+.|+++++|++.++ +++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~-~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN-QCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTT-EEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCC-CeEeeec
Confidence 4667788888899999999999999999998 7776653
No 405
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=27.10 E-value=84 Score=32.98 Aligned_cols=37 Identities=27% Similarity=0.509 Sum_probs=28.1
Q ss_pred ceeEEEEcCCCCEEEEEecCCeEEEEecCCCCcceeEEec
Q 009569 443 VITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKG 482 (532)
Q Consensus 443 ~i~~~~~sp~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 482 (532)
.|.++.+ +..++++-+.|..+|+|++.++ +++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~-~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSF-TLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTT-EEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCC-ceEEeecc
Confidence 4555554 3679999999999999999988 76666543
No 406
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=26.34 E-value=3.6e+02 Score=24.36 Aligned_cols=94 Identities=14% Similarity=0.068 Sum_probs=58.8
Q ss_pred chHHHHHHHHHHHHhcC-hHHHHHHHhhhcCcccCCHHHHHHHH---HHhcCChHHHHHHhhcCC-CCChhHHHHHHHHH
Q 009569 62 KKSEFIKIITRALYSLG-YDKSGALLEEESGIPMHSSVVNQFMQ---QVMDGYWDESIITLHMIG-LSDETAVKSASFLI 136 (532)
Q Consensus 62 ~~~e~~~lI~q~L~e~G-~~~sa~~L~~Es~i~~~~~~~~~~~~---~i~~G~w~~~~~~l~~l~-~~~~~~~~~~~~~i 136 (532)
+++++--.-...|.+.| |.++...|+.= +...+..+.+|.. +...|+|++|+..|.... .+++.....+.|.+
T Consensus 100 ~r~dl~LayA~~L~~~g~y~eA~~~l~~~--~~~~p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~L 177 (282)
T 4f3v_A 100 SPLAITMGFAACEAAQGNYADAMEALEAA--PVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAH 177 (282)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHTSS--CCTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHH
T ss_pred CHhHHHHHHHHHHHHCCCHHHHHHHHHHH--HhcCCchHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHH
Confidence 68888888888888888 88887777432 2233333344433 458899999999998653 23322111122221
Q ss_pred HHHHHHHHHhcCChhHHHHHHhhcc
Q 009569 137 LEQKFLELLRRDKVSAALNSLRSEI 161 (532)
Q Consensus 137 ~~q~~lelle~~~~~~a~~~L~~~l 161 (532)
-. -+...|+..+|+..+++-+
T Consensus 178 --G~--al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 178 --GV--AAANLALFTEAERRLTEAN 198 (282)
T ss_dssp --HH--HHHHTTCHHHHHHHHHHHH
T ss_pred --HH--HHHHCCCHHHHHHHHHHHh
Confidence 11 2334589999999999654
No 407
>1x2l_A CUT-like 2, homeobox protein CUX-2; CUT domain, human homeobox protein CUX-2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.7
Probab=24.95 E-value=2.2e+02 Score=21.30 Aligned_cols=77 Identities=16% Similarity=0.092 Sum_probs=44.0
Q ss_pred cchHHHHHHHHHHHHhcChHHHHHHHhhhcCcccCCHHHHHHHHHHhcCChHHHHHHhhcCCCCChhHHHHHHHHHHHHH
Q 009569 61 IKKSEFIKIITRALYSLGYDKSGALLEEESGIPMHSSVVNQFMQQVMDGYWDESIITLHMIGLSDETAVKSASFLILEQK 140 (532)
Q Consensus 61 i~~~e~~~lI~q~L~e~G~~~sa~~L~~Es~i~~~~~~~~~~~~~i~~G~w~~~~~~l~~l~~~~~~~~~~~~~~i~~q~ 140 (532)
+|-.+|.+=|-++|...+-..+. |-+.|+.-.=...-.+|...+.-......+-..+++-+.
T Consensus 17 ldTk~I~~~ike~L~~~~isQ~~------------------FA~~VLgrsQgtlS~lL~~PkpW~~L~~~Gre~yiRM~n 78 (101)
T 1x2l_A 17 LDTAEIAFQVKEQLLKHNIGQRV------------------FGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQ 78 (101)
T ss_dssp CCHHHHHHHHHHHHHHTTCCHHH------------------HHHHTTCSCHHHHHHHHHCCCCGGGCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCHHH------------------HHHHHHccccchHHHHhcCCCCHHHHhHhhhHHHHHHHH
Confidence 79999999999999999866653 333444222222334455544333322244445566666
Q ss_pred HHHHHhcCChhHHHHHHh
Q 009569 141 FLELLRRDKVSAALNSLR 158 (532)
Q Consensus 141 ~lelle~~~~~~a~~~L~ 158 (532)
++++ .+..+++.++.
T Consensus 79 WL~~---~er~~~Lr~~~ 93 (101)
T 1x2l_A 79 FLSD---EQNVLALRTIQ 93 (101)
T ss_dssp HHTC---THHHHHHHHHH
T ss_pred HccC---HHHHHHHHHhh
Confidence 6665 23445555554
No 408
>3ct5_A Morphogenesis protein 1; cell WALL, hydrolase, infection, late protein; HET: NAG; 1.37A {Bacteriophage phi-29} PDB: 3csz_A* 3csr_A* 3ct0_A* 3ct1_A*
Probab=24.79 E-value=50 Score=27.20 Aligned_cols=32 Identities=25% Similarity=0.176 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHhcChHHHHH-----HHhhhcCccc
Q 009569 63 KSEFIKIITRALYSLGYDKSGA-----LLEEESGIPM 94 (532)
Q Consensus 63 ~~e~~~lI~q~L~e~G~~~sa~-----~L~~Es~i~~ 94 (532)
.++..+-|++||...||+..+. -++.|||+..
T Consensus 14 ~~~~a~~i~~~l~~~G~s~~~aAGilGN~~~ESg~nP 50 (159)
T 3ct5_A 14 MKVNAQYILNYLSSNGWTKQAICGMLGNMQSESTINP 50 (159)
T ss_dssp HHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCc
Confidence 4566789999999999998875 4899999754
No 409
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=24.18 E-value=4.7e+02 Score=24.89 Aligned_cols=230 Identities=9% Similarity=-0.016 Sum_probs=114.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCeEEEEEeecCCeeE----------EEEEeecCCCCeEEEEeCCCCCEEEEeeCCCcEEE
Q 009569 274 EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQVS----------LKHRLSGHRKPVFTVSWSPNDHQLLTCGQEEAIRR 343 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~~----------~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~i 343 (532)
.|..++. .+.+.+.-..||.|+.|-....+++- ....+. ....|..++... ...+....||.|+.
T Consensus 76 ~v~~va~--G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~G~--~hs~al~~~G~v~~ 150 (423)
T 3mvd_K 76 DAVDISA--GGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISAGD--SHSACLLEDGRVFA 150 (423)
T ss_dssp SEEEEEE--CSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEECS--SEEEEEETTSCEEE
T ss_pred CceEEee--CCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEcCc--CeEEEEeCCCeEEE
Confidence 4655554 34455556679999999765422210 001111 223566666543 34555578899999
Q ss_pred EEC--CC-CcE--------EEEee-ccCCceEEEEEeeCCCeEEEEeCCCcEEEEECCC-C-------------------
Q 009569 344 WDV--NS-GEC--------LHVYE-KTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDG-R------------------- 391 (532)
Q Consensus 344 wd~--~~-~~~--------~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~------------------- 391 (532)
|-. .. ++. ..... .....|..++. ...+.++-..+|.|+.|-... +
T Consensus 151 wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~ 228 (423)
T 3mvd_K 151 WGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIAS--GADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKR 228 (423)
T ss_dssp EECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEE--CSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTT
T ss_pred EeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEec--CCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccc
Confidence 985 22 221 11111 12334555554 345566667889999996432 0
Q ss_pred ---eEEEeecCccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc----------ee---eeecCCceeEEEEcCCCCE
Q 009569 392 ---ELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANF----------ER---WIEEEEVITSFSLSKDNKY 455 (532)
Q Consensus 392 ---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~----------~~---~~~~~~~i~~~~~sp~~~~ 455 (532)
............|..++.... ..++.-..++.|+.|-....- .. .......|..++.. ..+
T Consensus 229 ~~~~p~~v~~~~~~~v~~i~~g~~-~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G--~~h 305 (423)
T 3mvd_K 229 DLLRPTQLIITRAKPFEAIWATNY-CTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGG--QHH 305 (423)
T ss_dssp TTSSCEEECCTTCCCEEEEEEETT-EEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEEC--SSE
T ss_pred cccCCeEEeecCCccEEEEEECCc-EEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcc--cCe
Confidence 111111112224555554422 223333588899998654311 00 01112345555543 445
Q ss_pred EEEEecCCeEEEEecCCCCcc--------e---eEEeccccceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 456 LLVNLINQEIHLWSIESDPKL--------V---SRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 456 l~~~~~dg~i~iwd~~~~~~~--------~---~~~~~~~~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
.++-..+|.|+.|=.....++ . ..+......+ +.+.. . ..+.+....||.|+.|=...
T Consensus 306 t~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v--~~ia~-G--~~hs~alt~~G~v~~wG~n~ 374 (423)
T 3mvd_K 306 TVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKI--VSVGC-G--EVCSYAVTIDGKLYSWGSGV 374 (423)
T ss_dssp EEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCE--EEEEE-E--TTEEEEEETTSCEEEEECCT
T ss_pred EEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCE--EEEEc-C--CCeEEEEcCCCCEEEECCCC
Confidence 555667899999965322111 1 1111111122 22222 2 13344457899999997654
No 410
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=23.98 E-value=3.2e+02 Score=24.22 Aligned_cols=98 Identities=7% Similarity=-0.028 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHhhhcCcccCCHHHHH---H-----HHHHhcCChHHHHHHhhcC-CCCChhHHHHHHH
Q 009569 64 SEFIKIITRALYSLGYDKSGALLEEESGIPMHSSVVNQ---F-----MQQVMDGYWDESIITLHMI-GLSDETAVKSASF 134 (532)
Q Consensus 64 ~e~~~lI~q~L~e~G~~~sa~~L~~Es~i~~~~~~~~~---~-----~~~i~~G~w~~~~~~l~~l-~~~~~~~~~~~~~ 134 (532)
+++...+..++....|.++...+++.-........... + .-....|++++|+..+.+. .............
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 155 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNL 155 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 35567778888888899988877755333222221111 1 1124568999999886642 2111000000012
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHhhcc
Q 009569 135 LILEQKFLELLRRDKVSAALNSLRSEI 161 (532)
Q Consensus 135 ~i~~q~~lelle~~~~~~a~~~L~~~l 161 (532)
.++...-.-+...+++.+|+..+++.+
T Consensus 156 ~~~~~lg~~y~~~~~~~~A~~~~~kal 182 (293)
T 2qfc_A 156 YIENAIANIYAENGYLKKGIDLFEQIL 182 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 233333344455688888888888655
No 411
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=23.94 E-value=6.4e+02 Score=26.33 Aligned_cols=59 Identities=14% Similarity=0.078 Sum_probs=35.5
Q ss_pred CeEEEEeCCCC-CEEEEeeCCCcEEEEECCCCcEEEEeecc-------CCceEEEEEee-CCCeEEEEe
Q 009569 319 PVFTVSWSPND-HQLLTCGQEEAIRRWDVNSGECLHVYEKT-------GVGLISCGWFL-DGGGIFAGM 378 (532)
Q Consensus 319 ~v~~l~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------~~~i~~~~~~~-~~~~l~~~~ 378 (532)
.|..|+++|.. ..++.+...+.|..++- .|+.=..+..+ ...+.+++++| +.+.++++.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 78999999963 45666665666666653 33332222221 23588999998 444555544
No 412
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=23.07 E-value=4.9e+02 Score=24.69 Aligned_cols=230 Identities=10% Similarity=0.094 Sum_probs=113.0
Q ss_pred cEEEEEEccCCCEEEEEeCCCeEEEEEeecCCee--------EEEEEeec-CCCCeEEEEeCCCCCEEEEeeCC-CcEEE
Q 009569 274 EVWFLQFSHDGKYLASSSKDQSAIIWEVKEDGQV--------SLKHRLSG-HRKPVFTVSWSPNDHQLLTCGQE-EAIRR 343 (532)
Q Consensus 274 ~V~~v~~s~~g~~las~s~dg~i~iwd~~~~~~~--------~~~~~~~~-h~~~v~~l~~s~~~~~l~s~~~d-g~i~i 343 (532)
.|..++.. +.+.+.-..||.|+.|-....+++ .....+.. ....|..++...+ +.+....+ +.|+.
T Consensus 17 ~v~~ia~G--~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~--ht~al~~~gg~v~~ 92 (406)
T 4d9s_A 17 KVLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD--HTVAYSQSGMEVYS 92 (406)
T ss_dssp CEEEEEEC--SSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS--EEEEEETTTTEEEE
T ss_pred ceEEEecC--CCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcc--eEEEEECCCCEEEE
Confidence 44444443 333444456888888876542221 11122221 2335777776433 33333444 58999
Q ss_pred EECCCC---------cE--EEEeec-cCCceEEEEEeeCCCeEEEEeCCCcEEEEECCCC----------e--EEEeecC
Q 009569 344 WDVNSG---------EC--LHVYEK-TGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGR----------E--LESWKGQ 399 (532)
Q Consensus 344 wd~~~~---------~~--~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----------~--~~~~~~~ 399 (532)
|-.... .. ...+.. ....|..++. ...+.++-..+|.|+.|-.... . .......
T Consensus 93 wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~--G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~ 170 (406)
T 4d9s_A 93 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC--GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF 170 (406)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE--CSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGG
T ss_pred EcCCCCcCCCCCCCCccccceEecccCCCCEEEEEE--ChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEeccc
Confidence 964321 11 111111 1234655554 3456666678999999976421 1 1111111
Q ss_pred ccCceEEEEEeeCCCEEEEEECCCeEEEEECCCCc--------ee----eee--cCCceeEEEEcCCCCEEEEEecCCeE
Q 009569 400 KTLRISDMAITDDGKRIISICREAAILLLDREANF--------ER----WIE--EEEVITSFSLSKDNKYLLVNLINQEI 465 (532)
Q Consensus 400 ~~~~v~~~~~s~~~~~l~~~~~dg~I~iwd~~~~~--------~~----~~~--~~~~i~~~~~sp~~~~l~~~~~dg~i 465 (532)
....|..++.. ....++...+|.|+.|-....- .. ... ....|..++.. ..+.++-..+|.|
T Consensus 171 ~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~v 246 (406)
T 4d9s_A 171 EGIRIKMVAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGAL 246 (406)
T ss_dssp TTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCCE
T ss_pred CCCcEEEEecC--CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCCE
Confidence 22246665554 3466666789999999753311 01 111 12345555543 3455555678999
Q ss_pred EEEecCCCCcce----------eEEeccc-cceEEEEEccCCCCCcEEEEEeCCCcEEEEeCCC
Q 009569 466 HLWSIESDPKLV----------SRYKGHK-RARFVIRSCFGGFEQAFIASGSEDSQVNIFLSFS 518 (532)
Q Consensus 466 ~iwd~~~~~~~~----------~~~~~~~-~~~~~i~~~~~s~d~~~l~sgs~dg~i~iw~~~~ 518 (532)
+.|=.....++- ..+.... ..+..+.+ -..+.+....||.|+.|=.+.
T Consensus 247 ~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~-----G~~hs~alt~~G~v~~wG~n~ 305 (406)
T 4d9s_A 247 YTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISG-----GWRHTMALTSDGKLYGWGWNK 305 (406)
T ss_dssp EEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEE-----CSSEEEEEETTSCEEEEECCT
T ss_pred EEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEe-----cCCEEEEEcCCCeEEEeeCCC
Confidence 999754331210 0111111 11222222 123445567899999997653
No 413
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=22.74 E-value=4.3e+02 Score=26.16 Aligned_cols=88 Identities=10% Similarity=0.056 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhcChHHHHHHHhh--hcCcccCCHHHH-HHHHHHhcCChHHHHHHhhcC---CCCChhHHHHHHHHHHH
Q 009569 65 EFIKIITRALYSLGYDKSGALLEE--ESGIPMHSSVVN-QFMQQVMDGYWDESIITLHMI---GLSDETAVKSASFLILE 138 (532)
Q Consensus 65 e~~~lI~q~L~e~G~~~sa~~L~~--Es~i~~~~~~~~-~~~~~i~~G~w~~~~~~l~~l---~~~~~~~~~~~~~~i~~ 138 (532)
=.+-||--|.+.--+.++...|++ +.|+..+...-. -+.-....|++++|..++..+ ++.++.. .|..+
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~----ty~~L- 181 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEP----ELAAL- 181 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHH----HHHHH-
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHH----HHHHH-
Confidence 345566666666667777666663 677766544322 334445789999999988866 3333221 11111
Q ss_pred HHHHHHHhcCChhHHHHHHhh
Q 009569 139 QKFLELLRRDKVSAALNSLRS 159 (532)
Q Consensus 139 q~~lelle~~~~~~a~~~L~~ 159 (532)
+--+...|+.++|+.+|++
T Consensus 182 --i~~~~~~g~~d~A~~ll~~ 200 (501)
T 4g26_A 182 --LKVSMDTKNADKVYKTLQR 200 (501)
T ss_dssp --HHHHHHTTCHHHHHHHHHH
T ss_pred --HHHHhhCCCHHHHHHHHHH
Confidence 1223345888888888773
No 414
>3iz5_k 60S ribosomal protein L36 (L36E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_k
Probab=22.74 E-value=28 Score=26.50 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=31.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCChhHHHHHHhhcccc
Q 009569 126 ETAVKSASFLILEQKFLELLRRDKVSAALNSLRSEIVP 163 (532)
Q Consensus 126 ~~~~~~~~~~i~~q~~lelle~~~~~~a~~~L~~~l~p 163 (532)
+....-+-|.-||...+|||..+....|+.|+.+.+--
T Consensus 45 diIrEV~GfAPYErR~mELLKvskDKRALKf~KKRlGt 82 (112)
T 3iz5_k 45 NLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGT 82 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHSSCCSH
T ss_pred HHHHHHhcCchHHHHHHHHHHhhhhHHHHHHHHHHhhH
Confidence 33444577999999999999999989999999987643
No 415
>4a18_Q RPL36, 60S ribosomal protein L36; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_Q 4a1b_Q 4a1d_Q
Probab=22.46 E-value=48 Score=24.82 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhcCC---hhHHHHHHhhccccCccChhhHHHhhh
Q 009569 134 FLILEQKFLELLRRDK---VSAALNSLRSEIVPLQINMSRVHELAS 176 (532)
Q Consensus 134 ~~i~~q~~lelle~~~---~~~a~~~L~~~l~pl~~~~~~~~~l~~ 176 (532)
|.-||...+|||..+. ...|+.|+++.+-.........++|+.
T Consensus 51 faPYErR~mELLKvsk~~~dKRAlKf~KKRlGth~RAKrKreel~~ 96 (104)
T 4a18_Q 51 FAPYEKRIIELIKAGSAKDSKKATKIARKRLGTHRRAKVKKALLEE 96 (104)
T ss_dssp CCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHCSHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHcccchhhHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4568999999999998 789999999876443333333334433
No 416
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=21.91 E-value=54 Score=24.65 Aligned_cols=23 Identities=13% Similarity=0.190 Sum_probs=20.5
Q ss_pred CCcchHHHHHHHHHHHHhcChHH
Q 009569 59 GVIKKSEFIKIITRALYSLGYDK 81 (532)
Q Consensus 59 ~~i~~~e~~~lI~q~L~e~G~~~ 81 (532)
..++|.||+..||+|-+++++.+
T Consensus 33 ~~~sR~eVvk~lW~YIK~nnLQd 55 (101)
T 1v32_A 33 EMISRYDVSDTIAKYISKEGLLD 55 (101)
T ss_dssp SCCCHHHHHHHHHHHHHHHTCBC
T ss_pred cccCHHHHHHHHHHHHHhhcCcC
Confidence 45899999999999999999864
No 417
>2lfh_A DNA-binding protein inhibitor ID-3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=21.58 E-value=44 Score=22.98 Aligned_cols=16 Identities=6% Similarity=0.277 Sum_probs=13.3
Q ss_pred cchHHHHHHHHHHHHh
Q 009569 61 IKKSEFIKIITRALYS 76 (532)
Q Consensus 61 i~~~e~~~lI~q~L~e 76 (532)
+++-|++|+...|...
T Consensus 49 LSKiEtLr~Ai~YI~~ 64 (68)
T 2lfh_A 49 LSQVEILQRVIDYILD 64 (68)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH
Confidence 5899999999988654
No 418
>4asv_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; chaperone, membrane, tail-anchored, post-translational targe; NMR {Saccharomyces cerevisiae} PDB: 4asw_A
Probab=21.34 E-value=62 Score=23.71 Aligned_cols=16 Identities=25% Similarity=0.353 Sum_probs=14.0
Q ss_pred chHHHHHHHHHHHHhc
Q 009569 62 KKSEFIKIITRALYSL 77 (532)
Q Consensus 62 ~~~e~~~lI~q~L~e~ 77 (532)
+++++...|.|||+..
T Consensus 18 skKrLA~sIIdFL~~s 33 (92)
T 4asv_A 18 SKEEIAALIVNYFSSI 33 (92)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHh
Confidence 5789999999999864
No 419
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=20.57 E-value=1.3e+02 Score=20.79 Aligned_cols=38 Identities=13% Similarity=0.070 Sum_probs=29.4
Q ss_pred CCcchHHHHHHHHHHHHhcChHH-----HHHHHhhhc-CcccCC
Q 009569 59 GVIKKSEFIKIITRALYSLGYDK-----SGALLEEES-GIPMHS 96 (532)
Q Consensus 59 ~~i~~~e~~~lI~q~L~e~G~~~-----sa~~L~~Es-~i~~~~ 96 (532)
+..+.+|+...|-..|.+..+.. --..|++.. |+.+.+
T Consensus 10 ~~Psd~ei~~~I~~IL~~aDL~tvT~K~VR~~Le~~~pg~dLs~ 53 (70)
T 1q1v_A 10 KPPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLTE 53 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHCSSSCCSH
T ss_pred CCcCHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHccCCCChH
Confidence 34688999999999999988754 335588888 887763
No 420
>3him_A Probable transcriptional regulator; TETR, bacterial, RHA1, PSI-2, MCSG, structural midwest center for structural genomics; 2.20A {Rhodococcus jostii}
Probab=20.43 E-value=1.2e+02 Score=25.10 Aligned_cols=59 Identities=3% Similarity=0.024 Sum_probs=45.1
Q ss_pred chHHHHHHHHHHHHhcChHH-HHHHHhhhcCcccC-----CHHHHHHHHHHhcCChHHHHHHhhc
Q 009569 62 KKSEFIKIITRALYSLGYDK-SGALLEEESGIPMH-----SSVVNQFMQQVMDGYWDESIITLHM 120 (532)
Q Consensus 62 ~~~e~~~lI~q~L~e~G~~~-sa~~L~~Es~i~~~-----~~~~~~~~~~i~~G~w~~~~~~l~~ 120 (532)
++++|+.--.+-+.+.||.. |...+-+++||+-. -...+.+...+..-.++.....+..
T Consensus 17 ~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~Y~~F~sK~~Ll~~~~~~~~~~~~~~~~~ 81 (211)
T 3him_A 17 AAARIRAAAIEVFAAKGYGATTTREIAASLDMSPGAVYPHYKTKESLLYAISLEGHHSVLAAITA 81 (211)
T ss_dssp HHHHHHHHHHHHHHHHCSTTCCHHHHHHHTTCCTTSSTTTCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCCcChhhhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999986 89999999999743 2456666666665555555555544
No 421
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=20.10 E-value=4e+02 Score=23.63 Aligned_cols=49 Identities=10% Similarity=0.110 Sum_probs=27.3
Q ss_pred HHHhcChHHHHHHHhhhcCcccCCHHHHHH--HHHHhcCChHHHHHHhhcC
Q 009569 73 ALYSLGYDKSGALLEEESGIPMHSSVVNQF--MQQVMDGYWDESIITLHMI 121 (532)
Q Consensus 73 ~L~e~G~~~sa~~L~~Es~i~~~~~~~~~~--~~~i~~G~w~~~~~~l~~l 121 (532)
++..--|..+...+++=-...-+....... .-.+..|++++|+..++++
T Consensus 127 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~ 177 (287)
T 3qou_A 127 LMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTI 177 (287)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTS
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhC
Confidence 334444555555555543333333322222 3345788899988888876
Done!