BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009573
(532 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FXT6|PEX14_ARATH Peroxisomal membrane protein PEX14 OS=Arabidopsis thaliana GN=PEX14
PE=1 SV=2
Length = 507
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 265/470 (56%), Positives = 330/470 (70%), Gaps = 48/470 (10%)
Query: 45 SVFVNSEPMREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDPPP 104
SVF NSEP+RE+Q+QNA+KFLSHP+VRGSPVI+RRSFLE+KGLTKEEIDEAFRRVPDPPP
Sbjct: 45 SVFKNSEPIREDQIQNAIKFLSHPRVRGSPVIHRRSFLERKGLTKEEIDEAFRRVPDPPP 104
Query: 105 SAQAT-SANQVGQVKSSSSNIQSQAPTQALQPQPAGAAPTAVSPVSTTMMSRFHWYHAVL 163
S+Q T + +Q GQ + S +Q QA +QP A AP V+P +SRF WYHA+L
Sbjct: 105 SSQTTVTTSQDGQ--QAVSTVQPQA----MQPVVAAPAPLIVTP-QAAFLSRFRWYHAIL 157
Query: 164 AVGLLAASGAGTAVFFKKSLIPRLKSWIRKVVLEEEDDSENKSIAKPSLAEEAAAAAKAA 223
AVG+LAASGAGTAVF K+SLIPR KSW+++++LEEE D K+ AKPSLAEEA AAAKAA
Sbjct: 158 AVGVLAASGAGTAVFIKRSLIPRFKSWVQRIMLEEETDPLKKADAKPSLAEEAVAAAKAA 217
Query: 224 AAAASDVAKASQELLNSKNEERRYFSELMNLLDVQLQEMKSMSNSIRKLEGPSNNSGRTS 283
+AAASDVA+ SQE++ +KNEER+YF +L +LL VQ+QEMKS+SN+IRKLEG SNN +
Sbjct: 218 SAAASDVARVSQEMMITKNEERKYFEDLTHLLGVQVQEMKSLSNNIRKLEGQSNNIPKIY 277
Query: 284 LVNQEDHRDSVTGVKQPYANG-KADFDMQSVRSSSPP-APGEPSVAPHPKSYMEIMAMVQ 341
+QE + SVT ++PY NG D+D +S RS+SPP AP + S PHPKSYM+IM+M+Q
Sbjct: 278 SADQEVYNGSVTTARKPYTNGSNVDYDTRSARSASPPAAPADSSAPPHPKSYMDIMSMIQ 337
Query: 342 RGEKPPNIRDINDLPPNPNQQLPNPRLAPKAKPWEVGQAQNASGQVIQSQVSAEGLNFKV 401
RGEKP NIR+IND+PPNPNQ L +PR+APK+KPW+ GQA
Sbjct: 338 RGEKPSNIREINDMPPNPNQPLSDPRIAPKSKPWDYGQAP-------------------- 377
Query: 402 QDNGLNHQSDDDSSVPWWQRKNVKITEVGEDEIKAGPYSVRTNEPPV--------QRTWV 453
QD N Q WWQ+KN + T+ G + A ++ NE QR+WV
Sbjct: 378 QDESSNGQ--------WWQQKNPRSTDFGYETTTAARFTANQNETSTMEPAAFQRQRSWV 429
Query: 454 PPQPPPVVMPEAAEAIRRPKPSGPTEQSTSHQLASQTSEVTDELQRITKI 503
PPQPPPV M EA EAIRRPKP +Q + + S V+DELQ+ITK
Sbjct: 430 PPQPPPVAMAEAVEAIRRPKPQAKIDQEAA--ASDGQSGVSDELQKITKF 477
>sp|Q642G4|PEX14_RAT Peroxisomal membrane protein PEX14 OS=Rattus norvegicus GN=Pex14
PE=1 SV=1
Length = 376
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 115/251 (45%), Gaps = 46/251 (18%)
Query: 35 EAAEQPISSPSVFVNSEPM--REEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEI 92
E AEQP + PS SE + RE + AVKFL + +VR SP+ RR+FL+KKGLT EEI
Sbjct: 5 EQAEQP-NQPSSSPGSENVVPREPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTDEEI 63
Query: 93 DEAFRRVPDPPPSAQATSANQVGQVKSSSSNIQSQAPTQALQPQPAGAAPTAVSPVSTTM 152
D AF+ Q G S + P +QP P +S +
Sbjct: 64 DLAFQ---------------QSGTASDEPSPVGPATPVVPVQP------PHLISQPYSPG 102
Query: 153 MSRFHWYHAVLAVGLLAASGAGTAVFFKKSLIPRLKSWIRKVVLEEEDDSENKSIAKPSL 212
SR+ Y A LA+ +LA G +KK L+P ++L +D + SL
Sbjct: 103 GSRWRDYGA-LAI-ILAGIAFGFHQLYKKYLLP--------LILGGREDRKQLERMAASL 152
Query: 213 AEEAAAAAKAAAAAASDVAKASQELLNSKNEERRYFSELMN----------LLDVQ-LQE 261
+E + + A+ + +A QELL + ++ + + + +L+ Q + E
Sbjct: 153 SELSGSVAQTVTQVQTTLASV-QELLRQQQQKVQELAHELAAAKATTSTNWILESQNINE 211
Query: 262 MKSMSNSIRKL 272
+KS NS++ L
Sbjct: 212 LKSEINSLKGL 222
>sp|Q9R0A0|PEX14_MOUSE Peroxisomal membrane protein PEX14 OS=Mus musculus GN=Pex14 PE=1
SV=1
Length = 376
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 115/260 (44%), Gaps = 64/260 (24%)
Query: 35 EAAEQPI--SSPSVFVNSEPMREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEI 92
E AEQP SSP N P RE + AVKFL + +VR SP+ RR+FL+KKGLT EEI
Sbjct: 5 EQAEQPNQPSSPPGSENVVP-REPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTDEEI 63
Query: 93 DEAFRRVPDPPPSAQATSANQVGQVKSSSSNIQSQAPTQALQPQPAGAAPTAVSPVSTTM 152
D AF+ Q+ T A +P P G A T V PV
Sbjct: 64 DLAFQ-----------------------------QSGTAADEPSPLGPA-TPVVPVQPPH 93
Query: 153 M---------SRFHWYHAVLAVGLLAASGAGTAVFFKKSLIPRLKSWIRKVVLEEEDDSE 203
+ SR+ Y A LA+ ++A G +K+ L+P ++L +D +
Sbjct: 94 LTPQPYSPRGSRWRDYGA-LAI-IMAGIAFGFHQLYKRYLLP--------LILGGREDRK 143
Query: 204 NKSIAKPSLAEEAAAAAKAAAAAASDVAKASQELLNSKNEERRYFSELMN---------- 253
SL+E + A+ + +A QELL + ++ + + +
Sbjct: 144 QLERMAASLSELSGTVAQTVTQVQTTLASV-QELLRQQQQKVQELAHELATAKATTSTNW 202
Query: 254 LLDVQ-LQEMKSMSNSIRKL 272
+L+ Q + E+KS NS++ L
Sbjct: 203 ILESQNINELKSEINSLKGL 222
>sp|O75381|PEX14_HUMAN Peroxisomal membrane protein PEX14 OS=Homo sapiens GN=PEX14 PE=1
SV=1
Length = 377
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 46/251 (18%)
Query: 35 EAAEQPISSPSVFVNSEPM--REEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEI 92
E AEQP S PS SE + RE + AVKFL + +VR SP+ RR+FL+KKGLT EEI
Sbjct: 5 EQAEQP-SQPSSTPGSENVLPREPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTDEEI 63
Query: 93 DEAFRRVPDPPPSAQATSANQVGQVKSSSSNIQSQAPTQALQP-QPAGAAPTAVSPVSTT 151
D AF++ T+A++ + ++ + Q P QP PAG
Sbjct: 64 DMAFQQ--------SGTAADEPSSLGPATQVVPVQPPHLISQPYSPAG------------ 103
Query: 152 MMSRFHWYHAVLAVGLLAASGAGTAVFFKKSLIPRLKSWIRKVVLEEEDDSENKSIAKPS 211
SR+ Y A LA+ ++A G +KK L+P ++L +D + +
Sbjct: 104 --SRWRDYGA-LAI-IMAGIAFGFHQLYKKYLLP--------LILGGREDRKQLERMEAG 151
Query: 212 LAEEAAAAAKAAAAAASDVAKASQELLNSKNEERRYFSELMN---------LLDVQ-LQE 261
L+E + + A+ + +A + L+ + + + EL +L+ Q + E
Sbjct: 152 LSELSGSVAQTVTQLQTTLASVQELLIQQQQKIQELAHELAAAKATTSTNWILESQNINE 211
Query: 262 MKSMSNSIRKL 272
+KS NS++ L
Sbjct: 212 LKSEINSLKGL 222
>sp|Q9Z2Z3|PEX14_CRILO Peroxisomal membrane protein PEX14 OS=Cricetulus longicaudatus
GN=PEX14 PE=2 SV=1
Length = 377
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 51/234 (21%)
Query: 54 REEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRR----VPDPPPSAQAT 109
RE + AVKFL + +VR SP+ RR+FL+KKGLT +EID AF++ +PP AT
Sbjct: 25 REPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTDDEIDLAFQQSGTATEEPPSLGLAT 84
Query: 110 SANQVGQVKSSSSNIQSQAPTQALQPQPAGAAPTAVSPVSTTMMSRFHWYHAVLAVGLLA 169
V Q P QP G+ SR+ Y A LA+ ++A
Sbjct: 85 PVAPV------------QTPHLIAQPCSPGS-------------SRWRDYGA-LAI-IMA 117
Query: 170 ASGAGTAVFFKKSLIPRLKSWIRKVVLEEEDDSENKSIAKPSLAEEAAAAAKAAAAAASD 229
G +KK L+P ++L +D + SL+E + + A+ +
Sbjct: 118 GIAFGFHQLYKKYLLP--------LILGGREDRKQLERMASSLSELSGSVAQTVTQVQTT 169
Query: 230 VAKASQELLNSKNEERRYFSELMN----------LLDVQ-LQEMKSMSNSIRKL 272
+A QELL + ++ + + + +L+ Q + E+KS NS++ L
Sbjct: 170 LASV-QELLRQQQQKVQELAHELAAAKATTSTNWILESQNINELKSEINSLKGL 222
>sp|Q54C55|PEX14_DICDI Peroxisomal membrane protein PEX14 OS=Dictyostelium discoideum
GN=pex14 PE=3 SV=1
Length = 748
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 45 SVFVNSEPMREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDPPP 104
S+ S RE+ V+ AV FL++P V+ + + + ++LEKKGLT +E+ EA +RV
Sbjct: 133 SILSPSSNFREDMVKKAVLFLNNPNVKNTALARKVAYLEKKGLTSDEVKEALKRVETGNI 192
Query: 105 SAQATSANQVGQVKSSS 121
+ +T+ + + Q S S
Sbjct: 193 NGSSTNNSNITQSNSIS 209
>sp|O60065|PEX14_SCHPO Peroxisomal membrane protein pex14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pex14 PE=3 SV=1
Length = 286
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 53 MREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDP 102
MRE+ ++N+V+FL V +P + + FL+ KGLT EEI EAF+ +P
Sbjct: 1 MREDLLRNSVEFLREKTVLDAPDVKKIEFLKSKGLTAEEIQEAFKLAKNP 50
>sp|Q9HG09|PEX14_PICPA Peroxisomal membrane protein PEX14 OS=Komagataella pastoris
GN=PEX14 PE=1 SV=1
Length = 425
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 53 MREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRR 98
+REE V +AV+FL +P++ SP+ + F+E KGL + E+ EA R
Sbjct: 4 IREEMVTSAVEFLKNPQIADSPLAKKIEFIESKGLNEAEVKEALLR 49
>sp|P78723|PEX14_PICAN Peroxisomal membrane protein PER10 OS=Pichia angusta GN=PEX14
PE=3 SV=1
Length = 351
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 54 REEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRR 98
R E V +AV+FL + SP+ + FLE KGLT++EI+EA ++
Sbjct: 10 RAELVSSAVEFLLDQSIADSPLAKKVEFLESKGLTQQEIEEALQK 54
>sp|P53112|PEX14_YEAST Peroxisomal membrane protein PEX14 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PEX14 PE=1 SV=1
Length = 341
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 54 REEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDPPPSAQATSANQ 113
R+ +AV FL ++ +P++ + FL+ KGLT++EI+ A + P ++
Sbjct: 9 RKALFDSAVSFLKDESIKDAPLLKKIEFLKSKGLTEKEIEIAMKE-----PKKDGIVGDE 63
Query: 114 VGQVKSSSSNIQSQ 127
V + S+ N SQ
Sbjct: 64 VSKKIGSTENRASQ 77
>sp|Q72H75|GATB_THET2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 /
DSM 7039) GN=gatB PE=3 SV=1
Length = 469
Score = 32.7 bits (73), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 385 GQVIQSQVSAEGLN-FKVQDNGLNHQSDDDSSVPWWQRKNVKITEVGEDEIKAGPYSVRT 443
G+ + ++V + LN FK L ++ + + + + VK +G +E Y +RT
Sbjct: 197 GEPLGTKVEIKNLNSFKSVQRALEYEIRRQTEI-LRRGEKVKQATMGFEEGSGKTYPMRT 255
Query: 444 NEPPVQRTWVP-PQPPPVVMP-EAAEAIRRPKPSGPTEQSTSHQ 485
E + P P PPVV+P + E +RR P P E+ ++
Sbjct: 256 KEEEADYRYFPEPDLPPVVIPRDWLEEVRRSLPELPWEKEARYR 299
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.122 0.343
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,876,253
Number of Sequences: 539616
Number of extensions: 8850927
Number of successful extensions: 44871
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 320
Number of HSP's that attempted gapping in prelim test: 43732
Number of HSP's gapped (non-prelim): 1478
length of query: 532
length of database: 191,569,459
effective HSP length: 122
effective length of query: 410
effective length of database: 125,736,307
effective search space: 51551885870
effective search space used: 51551885870
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 64 (29.3 bits)