BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009574
(532 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53383|MRP_SYNY3 Protein mrp homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=mrp PE=3 SV=1
Length = 353
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 198/327 (60%), Gaps = 14/327 (4%)
Query: 85 VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRANEVV 144
VL L + DP+ +V ++D+ I A G VSF L LTTPACP+++ + + V
Sbjct: 7 VLTVLRPVQDPELQKSLVELNMIRDVAI--AGGTVSFTLVLTTPACPLREFIVEDCEKAV 64
Query: 145 LAIPWVNKVNVTMSAQPARPIFAEQLP--EGLQKISNIVAVSSCKGGVGKSTVAVNLAYT 202
+P V KV V ++A+ + + LP + + ++ NI+A+SS KGGVGKSTVAVN+A
Sbjct: 65 KTLPGVEKVEVKVTAETPQ---QKSLPDRQSVGQVKNIIAISSGKGGVGKSTVAVNVAVA 121
Query: 203 LAGMGARVGIFDADVYGPSLPTMVSPENRLLEM--NPEKRTIIPTEYLGVKLVSFGF--S 258
LA GA VG+ DAD+YGP+ PTM+ +++ +P+ + P G+K+VS GF
Sbjct: 122 LAQTGAAVGLLDADIYGPNAPTMLGLSGAAVQVQNSPQGEVLEPVFNHGIKMVSMGFLID 181
Query: 259 GQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTT 318
I RGPM++G+I Q L WG LDYL++DMPPGTGD QLTL Q VP+ AVIVTT
Sbjct: 182 PDQPVIWRGPMLNGIIRQFLYQVNWGALDYLIVDMPPGTGDAQLTLTQSVPMAGAVIVTT 241
Query: 319 PQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHF---DADGKRYYPFGRGSGSQVVQQFGI 375
PQ ++ +D +G++MF ++ V + +VENM +F D ++Y FG G G + ++ +
Sbjct: 242 PQTVSLLDARRGLKMFQQMGVNVLGIVENMSYFIPPDLPDRQYDLFGSGGGEKASKELNV 301
Query: 376 PHLFDLPIRPTLSASGDSGMPEVAADP 402
P L +P+ L GD G+P V + P
Sbjct: 302 PLLGCVPLEIGLREGGDKGVPIVVSQP 328
>sp|Q9ZMM5|MRP_HELPJ Protein mrp homolog OS=Helicobacter pylori (strain J99) GN=mrp PE=3
SV=1
Length = 368
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 196/338 (57%), Gaps = 9/338 (2%)
Query: 82 ENDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRAN 141
+ DVL AL II P+F DIVS GFVK++ +++ ++ +E+ + + + + +
Sbjct: 4 QEDVLNALKTIIYPNFEKDIVSFGFVKNITLHD--NQLGLLIEIPSSSEETSAILRENIS 61
Query: 142 EVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQK-ISNIVAVSSCKGGVGKSTVAVNLA 200
+ + V +N+ + P +P + + L K I ++V +SS KGGVGKST +VNL+
Sbjct: 62 KA-MQEKGVKALNLDIKT-PPKPQAPKPTTKNLAKNIKHVVMISSGKGGVGKSTTSVNLS 119
Query: 201 YTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF-SG 259
LA + +VG+ DADVYGP++P M+ +N + M+P + +IP + GV ++S G
Sbjct: 120 IALANLNQKVGLLDADVYGPNIPRMMGLQNADVIMDPSGKKLIPLKAFGVSVMSMGLLYD 179
Query: 260 QGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTT 318
+G++++ RGPM+ I Q+L+ WG+LD LV+DMPPGTGD QLTL Q VPL+A + VTT
Sbjct: 180 EGQSLIWRGPMLMRAIEQMLSDIIWGDLDVLVVDMPPGTGDAQLTLAQAVPLSAGITVTT 239
Query: 319 PQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIP 376
PQ ++ D + + MF KL +P +VENM F + K FG S S +++ +
Sbjct: 240 PQIVSLDDAKRSLDMFKKLHIPIAGIVENMGSFVCEHCKKESEIFGSNSMSGLLEAYNTQ 299
Query: 377 HLFDLPIRPTLSASGDSGMPEVAADPCGEVANTFQDLG 414
L LP+ P + GD G P V + P A F+ +
Sbjct: 300 ILAKLPLEPKVRLGGDKGEPIVISHPTSVSAKIFEKMA 337
>sp|Q9RVM9|MRP_DEIRA Protein mrp homolog OS=Deinococcus radiodurans (strain ATCC 13939 /
DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=mrp PE=3 SV=1
Length = 350
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 142/351 (40%), Positives = 202/351 (57%), Gaps = 27/351 (7%)
Query: 83 ND-VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRAN 141
ND +L+ALS + DP+ D+VS G ++ +++ + +V ++ LTTPACP+K E
Sbjct: 2 NDALLRALSTVNDPELHRDLVSLGMIERAELSGDVAQV--KVNLTTPACPLKGQIELDVR 59
Query: 142 EVVLAIPWVNKVNVTMSA------QPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTV 195
+L +P V V + A QPA P + ++V V S KGGVGKS+V
Sbjct: 60 SALLQVPGVRDVQIEFGAMVRAATQPALP-----------GVKHVVLVGSGKGGVGKSSV 108
Query: 196 AVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSF 255
AVNLA +LA GARVG+ DADVYGPS+ M+ + N E R + P E GV+ +S
Sbjct: 109 AVNLAASLARDGARVGLLDADVYGPSVAHMLGQGQARVTAN-EDRKMRPIEAHGVRFISM 167
Query: 256 G-FSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAA 313
S G+A++ RGPM+ I Q L + WGELDYL++D+PPGTGD+QL+L Q V +T A
Sbjct: 168 ANLSPAGQALVWRGPMLHSAIQQFLKDSAWGELDYLIVDLPPGTGDVQLSLTQTVQVTGA 227
Query: 314 VIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDA--DGKRYYPFGRGSGSQVVQ 371
VIVTTPQ +A ID A+ + MF K VP + VVENM +F A G Y FGRG ++ +
Sbjct: 228 VIVTTPQDVALIDAARAIDMFRKASVPVLGVVENMSYFVAPDTGLTYDIFGRGGSRKLGE 287
Query: 372 QFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVANTFQDLGVCVVQQCA 422
Q+ P L ++P+ + D+G P + A P A + + + Q +
Sbjct: 288 QY--PLLGEIPLDVEVRKDADAGAPAILAHPESVAAQALRAVARTLAGQIS 336
>sp|O24999|MRP_HELPY Protein mrp homolog OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=mrp PE=3 SV=2
Length = 368
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 197/338 (58%), Gaps = 9/338 (2%)
Query: 82 ENDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRAN 141
+ DVL AL II P+F DIVS GFVK++ +++ ++ +E+ + + + + +
Sbjct: 4 QEDVLNALKTIIYPNFEKDIVSFGFVKNITLHD--DQLGLLIEIPSSSEETSAILRENIS 61
Query: 142 EVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQK-ISNIVAVSSCKGGVGKSTVAVNLA 200
+ + V +N+ + P +P + + L K I ++V +SS KGGVGKST +VNL+
Sbjct: 62 KA-MQEKGVKALNLDIKT-PPKPQAPKPTTKNLAKNIKHVVMISSGKGGVGKSTTSVNLS 119
Query: 201 YTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF-SG 259
LA + +VG+ DADVYGP++P M+ ++ + M+P + +IP + GV ++S G
Sbjct: 120 IALANLNQKVGLLDADVYGPNIPRMMGLQSADVIMDPSGKKLIPLKAFGVSVMSMGLLYD 179
Query: 260 QGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTT 318
+G++++ RGPM+ I Q+L+ WG+LD LV+DMPPGTGD QLTL Q VPL+A + VTT
Sbjct: 180 EGQSLIWRGPMLMRAIEQMLSDIIWGDLDVLVVDMPPGTGDAQLTLAQAVPLSAGITVTT 239
Query: 319 PQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIP 376
PQ ++ D + + MF KL +P +VENM F + K FG S S++++ +
Sbjct: 240 PQIVSLDDAKRSLDMFKKLHIPIAGIVENMGSFVCEHCKKESEIFGSNSMSELLEAYHTQ 299
Query: 377 HLFDLPIRPTLSASGDSGMPEVAADPCGEVANTFQDLG 414
L LP+ P + GD G P V + P A F+ +
Sbjct: 300 ILAKLPLEPKVRLGGDRGEPIVISHPNSVSAKIFEKMA 337
>sp|P45135|MRP_HAEIN Protein mrp homolog OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=mrp PE=3 SV=2
Length = 370
Score = 208 bits (529), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 180/326 (55%), Gaps = 12/326 (3%)
Query: 95 PDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPAC--PIKDMFEQRANEVVLAIPWVNK 152
P D++ +K ++ G + R+EL P + +Q ++ +L
Sbjct: 27 PTLQKDLIVLNTLKKVE----KGGDTLRIELQLPFAWNSGAEQLKQAVSDALLKATDCKL 82
Query: 153 VNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGI 212
+ ++ Q A A P ++ + NI+AVSS KGGVGKS+V+VNLA L GARVGI
Sbjct: 83 IKWAVAYQIATLKRANNQP-AVKGVKNIIAVSSGKGGVGKSSVSVNLALALQAQGARVGI 141
Query: 213 FDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMV 270
DAD+YGPS+P M+ ++ +P+ + I P + G+ S GF + I RGPM
Sbjct: 142 LDADIYGPSIPHMLGAADQR-PTSPDNQHITPIKAHGLSANSIGFLMNEDSATIWRGPMA 200
Query: 271 SGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKG 330
S ++QLL T W LDYLVIDMPPGTGDIQLTL Q +P+T AV+VTTPQ +A +D KG
Sbjct: 201 SSALSQLLNETLWDSLDYLVIDMPPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAVKG 260
Query: 331 VRMFSKLKVPCIAVVENMC-HFDAD-GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLS 388
+ MF ++ VP + +VENM H ++ G FG G ++ +++ + L LP+ +
Sbjct: 261 ISMFERVSVPVLGIVENMSMHICSECGHHEAIFGTGGAEKMAEKYNVKVLAQLPLHIRIR 320
Query: 389 ASGDSGMPEVAADPCGEVANTFQDLG 414
D+G P V P E++ F L
Sbjct: 321 EDLDAGNPTVVRVPENEISQAFLQLA 346
>sp|P72190|YCAB_PSEFR Uncharacterized ATP-binding protein in capB 3'region OS=Pseudomonas
fragi PE=3 SV=1
Length = 287
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 122/251 (48%), Positives = 155/251 (61%), Gaps = 5/251 (1%)
Query: 169 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSP 228
Q+P GL + NIVAV+S KGGVGKST A NLA LA GARVGI DAD+YGPS M
Sbjct: 31 QIP-GLANVKNIVAVASGKGGVGKSTTAANLALALAREGARVGILDADIYGPSQGVMFGI 89
Query: 229 ENRLLEMNPEKRTIIPTEYLGVKLVSFGFSGQGRAIM--RGPMVSGVINQLLTTTEWGEL 286
+++ +P E GV+++S F M RGPMVSG + QL+T T W +L
Sbjct: 90 AEGTRPKIRDQKWFVPIEAHGVEVMSMAFLTDDNTPMVWRGPMVSGALLQLVTQTAWNDL 149
Query: 287 DYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 346
DYLVIDMPPGTGDIQLTL Q VP+ +VIVTTPQ LA +D KGV MF K+ +P + VVE
Sbjct: 150 DYLVIDMPPGTGDIQLTLAQKVPVAGSVIVTTPQDLALLDARKGVEMFRKVNIPVLGVVE 209
Query: 347 NMC-HFDAD-GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCG 404
NM H ++ G + FG G G ++ Q+G+ L LP+ + D+G P ADP
Sbjct: 210 NMAVHICSNCGHAEHLFGEGGGEKLATQYGVEVLASLPLAMEIREQADNGKPTAIADPNS 269
Query: 405 EVANTFQDLGV 415
+A +Q+L V
Sbjct: 270 PIALIYQELAV 280
>sp|Q54F15|NUBPL_DICDI Iron-sulfur protein NUBPL OS=Dictyostelium discoideum GN=nubpl PE=3
SV=1
Length = 323
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 150/257 (58%), Gaps = 4/257 (1%)
Query: 174 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 233
++ I NI+AVSS KGGVGKST AVN+A L+ VG+ D DV+GPS+P M+ +N
Sbjct: 53 IEGIKNIIAVSSAKGGVGKSTCAVNIALGLSSHNLSVGLLDVDVFGPSIPLMMDLKNHEK 112
Query: 234 EMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVI 291
E +IP + G+K +S GF + I RGPMV + +LL T+WG LD LV
Sbjct: 113 PFTNELNQMIPLQNYGIKCMSMGFLVNEDDPIIWRGPMVGSALEKLLRQTDWGHLDVLVC 172
Query: 292 DMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHF 351
D+PPGTGD LT+CQ VPLT AVIV+TPQ +A DV +GV MF K++VP + +VENM +F
Sbjct: 173 DLPPGTGDAILTMCQRVPLTGAVIVSTPQDVALADVVRGVNMFKKVEVPILGLVENMSYF 232
Query: 352 DAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVANT 409
+ + + FG ++ GI L D+PI + + DSG P P A
Sbjct: 233 NCPHCNESTHIFGNEGAKNTAKKMGINFLGDVPIHLQIRETSDSGKPITVTQPDSPQAKN 292
Query: 410 FQDLGVCVVQQCAKIRQ 426
++D+ +++Q I
Sbjct: 293 YKDISKEIIKQLEIINN 309
>sp|P0AF08|MRP_ECOLI Protein mrp OS=Escherichia coli (strain K12) GN=mrp PE=3 SV=1
Length = 369
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 154/252 (61%), Gaps = 5/252 (1%)
Query: 173 GLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRL 232
G+ + NI+AVSS KGGVGKS+ AVNLA LA GA+VGI DAD+YGPS+PTM+ EN+
Sbjct: 102 GINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQR 161
Query: 233 LEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLV 290
+P+ + P G+ S G+ + + RGPM S + Q+L T W +LDYLV
Sbjct: 162 -PTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLV 220
Query: 291 IDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENM-C 349
+DMPPGTGDIQLTL Q +P+T AV+VTTPQ +A ID KG+ MF K++VP + +VENM
Sbjct: 221 LDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSV 280
Query: 350 HFDADGKRYYP-FGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVAN 408
H ++ + P FG G ++ +++ L +P+ +L D G P V + P E
Sbjct: 281 HICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTA 340
Query: 409 TFQDLGVCVVQQ 420
++ L V Q
Sbjct: 341 IYRQLADRVAAQ 352
>sp|P0AF09|MRP_ECOL6 Protein mrp OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=mrp PE=3 SV=1
Length = 369
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 154/252 (61%), Gaps = 5/252 (1%)
Query: 173 GLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRL 232
G+ + NI+AVSS KGGVGKS+ AVNLA LA GA+VGI DAD+YGPS+PTM+ EN+
Sbjct: 102 GINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQR 161
Query: 233 LEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLV 290
+P+ + P G+ S G+ + + RGPM S + Q+L T W +LDYLV
Sbjct: 162 -PTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLV 220
Query: 291 IDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENM-C 349
+DMPPGTGDIQLTL Q +P+T AV+VTTPQ +A ID KG+ MF K++VP + +VENM
Sbjct: 221 LDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSV 280
Query: 350 HFDADGKRYYP-FGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVAN 408
H ++ + P FG G ++ +++ L +P+ +L D G P V + P E
Sbjct: 281 HICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTA 340
Query: 409 TFQDLGVCVVQQ 420
++ L V Q
Sbjct: 341 IYRQLADRVAAQ 352
>sp|O66946|MRP_AQUAE Protein mrp homolog OS=Aquifex aeolicus (strain VF5) GN=mrp PE=3
SV=1
Length = 364
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 202/364 (55%), Gaps = 33/364 (9%)
Query: 81 AENDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRA 140
A DV++AL + D G + VKD+++ +G V + P ++D+ +
Sbjct: 2 AVQDVIEALKKETLEDVGINQNLAQLVKDIKM---VGNV-LTIVFEPPKQGLEDIIRAKV 57
Query: 141 NEVVLAIPWVNKVNVTMSAQPAR--------------------PIFAEQLPEGLQKISNI 180
+ + +P V K++V A+ P+F + G + +I
Sbjct: 58 IDALGNLPEVQKIDVKFVKPQAQIPVKQQAPQQQQTPPPQTQQPMFTRKKVPG---VKHI 114
Query: 181 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKR 240
+AV S KGGVGKSTVA NLA L+ +G +VG+ DADVYGPS+PT+ + + ++ +R
Sbjct: 115 IAVGSGKGGVGKSTVAANLAVALSQLGYKVGLLDADVYGPSVPTLFGLKGERVTVDQFQR 174
Query: 241 TIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGT 297
IIP E G+K++S GF S I RGPM+ + + L +T+WG LD+LV+D+PPGT
Sbjct: 175 -IIPVEKYGLKILSIGFMLPSEDTPIIWRGPMLMKALTEFLFSTKWGNLDFLVMDLPPGT 233
Query: 298 GDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHF--DADG 355
GD+Q+TL Q V LT AV+VTTPQ +A DV K V MF ++ +P + V+ENM +F +D
Sbjct: 234 GDVQITLAQNVELTGAVVVTTPQDVALADVKKAVSMFREVNIPVLGVIENMAYFICPSDK 293
Query: 356 KRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVANTFQDLGV 415
++YY FG+G ++ +G+ L +PI P ++ D G P V + P EVA F +
Sbjct: 294 QKYYIFGKGKVAEFANAYGLKILGSIPIDPEVAEKSDKGEPIVISHPDSEVAKAFLSIAK 353
Query: 416 CVVQ 419
+ Q
Sbjct: 354 VLSQ 357
>sp|P53382|MRP_MYCLE Protein mrp homolog OS=Mycobacterium leprae (strain TN) GN=mrp PE=3
SV=2
Length = 383
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 190/357 (53%), Gaps = 39/357 (10%)
Query: 74 SAVSTGTAENDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIK 133
SAVST AL+++IDP+ I G VK++ I E G V + LT +CP K
Sbjct: 13 SAVST---------ALAKVIDPELQRPITELGMVKNIDI-EPGGNVQVGIYLTIASCPKK 62
Query: 134 DMFEQRANEVVLAIPWVNKVNVTMS--AQPARPIFAEQLPEGLQK----------ISNIV 181
+R + + +P V V++ + R ++L ++ ++ +
Sbjct: 63 SEISKRVTKAIADVPGTAAVEVSLDVMSDEQRTKLRKKLRGDAREPMIPFAQPNSLTRVY 122
Query: 182 AVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT 241
V+S KGGVGKSTV VNLA +A G VG+ DAD++G S+P M+ R +++ +
Sbjct: 123 TVASGKGGVGKSTVTVNLATAIAARGLAVGVLDADIHGHSIPRMMGSNQRPIQL---ESM 179
Query: 242 IIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 299
I+P VK++S G +G I RGPM+ + Q L+ WG+LD L++D+PPGTGD
Sbjct: 180 ILPPIVHEVKVISIGQFTEGNTPVIWRGPMLHRALQQFLSDVYWGDLDVLMLDLPPGTGD 239
Query: 300 IQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS-KLKVPCIAVVENMCHFDA-DGKR 357
I +++ Q++P ++VTTPQ LA +VA+ + + + + VVENM DG R
Sbjct: 240 IAISVAQLIPNAEILVVTTPQ-LAAAEVAERAGSIALQTRQRIVGVVENMSGLMMPDGSR 298
Query: 358 YYPFGRGSGSQVVQQFG------IPHLFDLPIRPTLSASGDSGMPEV--AAD-PCGE 405
FG G G QV ++ +P L +P+ P L A+GDSG+P V A+D P G+
Sbjct: 299 LQVFGEGGGQQVAERLSRAVGTDVPLLGQIPLDPALVAAGDSGIPIVLNASDSPVGK 355
>sp|Q57731|Y283_METJA Uncharacterized ATP-binding protein MJ0283 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0283 PE=3 SV=1
Length = 290
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 144/248 (58%), Gaps = 10/248 (4%)
Query: 163 RPIFAEQ---LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYG 219
+ + A+Q + E + KI + + + S KGGVGKSTV VNLA L MG +VG+ DAD++G
Sbjct: 21 KKLLAQQDAKIRENMSKIKHKIVILSGKGGVGKSTVTVNLAAALNLMGKKVGVLDADIHG 80
Query: 220 PSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQ 276
P++P M+ EN P I T+ G+K +S G+ + I RGP VSG I Q
Sbjct: 81 PNIPKMLGVENTQPMAGPAGIFPIVTKD-GIKTMSIGYLLPDDKTPVIWRGPKVSGAIRQ 139
Query: 277 LLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVP-LTAAVIVTTPQKLAFIDVAKGVRMFS 335
L+ WGELDYL+ID PPGTGD QLT+ Q +P + A+IVTTP++++ +DV K + M
Sbjct: 140 FLSDVVWGELDYLLIDTPPGTGDEQLTIMQSIPDIDGAIIVTTPEEVSVLDVKKSIMMAK 199
Query: 336 KLKVPCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDS 393
L +P I ++ENM F K FGRG G + ++ G+ L +P+ + D
Sbjct: 200 MLNIPIIGIIENMSGFVCPYCNKVVDIFGRGGGEKAAKELGVEFLGRIPLDIKAREASDK 259
Query: 394 GMPEVAAD 401
G+P V D
Sbjct: 260 GIPMVLLD 267
>sp|Q1RHB0|MRP_RICBR Protein mrp homolog OS=Rickettsia bellii (strain RML369-C) GN=mrp
PE=3 SV=1
Length = 318
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 156/277 (56%), Gaps = 38/277 (13%)
Query: 132 IKDMFEQRANEVVLAIPWVNKVNV------TMSAQPARPIFAEQLPEGLQKISNIVAVSS 185
IK+ ++ NE+V + K+ + T+ +P +P + E ++KI + V+S
Sbjct: 55 IKNTAIKKLNEIV----GIGKITIVFTESKTVEKKPQKP---KHFVENVKKI---ILVAS 104
Query: 186 CKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT---- 241
KGGVGKST++ +A L+ RVGI DAD+YGPS+P + +N +T
Sbjct: 105 GKGGVGKSTISALIAQQLSLENHRVGIVDADIYGPSIP-------HIFGINEVPQTVGGR 157
Query: 242 IIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 299
IIP ++++S GF + + I RGPM S I QLL+ T+W LDYL+IDMPPGTGD
Sbjct: 158 IIPVRAKNIEVISIGFFVKNYSAIIWRGPMASKTIYQLLSVTKWDNLDYLIIDMPPGTGD 217
Query: 300 IQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDADGKRYY 359
I L++ + L VIVTTPQK++ IDV + + ++ KL +P I ++ENM
Sbjct: 218 IHLSMLENYHLNGVVIVTTPQKMSEIDVVRSIDLYQKLNLPIIGIIENMSDL-------- 269
Query: 360 PFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMP 396
F SGS + Q++ IP + +P+ P ++ + D +P
Sbjct: 270 -FDGNSGSHLSQKYNIPLIAQIPVIPKIANACDKSLP 305
>sp|Q4UKB5|MRP_RICFE Protein mrp homolog OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=mrp PE=3 SV=1
Length = 318
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 153/282 (54%), Gaps = 22/282 (7%)
Query: 117 GEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQK 176
+ F ++++ + + +A + + I +NK+ + + A++ ++
Sbjct: 36 NNIGFSIDISGKNKLEAEELKAKAIDKLNEISEINKITIVFTESKPMEKKAQKPKHFVEN 95
Query: 177 ISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMN 236
+ I+ V+S KGGVGKST++ +A L+ RVGI DAD+YGPS+P + +N
Sbjct: 96 VKKIILVASGKGGVGKSTISALIAQQLSLENYRVGIVDADIYGPSIP-------HIFGIN 148
Query: 237 PEKRT----IIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLV 290
+T IIP ++++S GF I RGPM S I QLL+ T+W LDYL+
Sbjct: 149 EVPKTKDGRIIPITVKSIQVISIGFFVKDHSAIIWRGPMASKTIYQLLSVTKWDNLDYLI 208
Query: 291 IDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCH 350
IDMPPGTGDI L++ + L +IVTTPQK++ IDV + + ++ KL +P + ++ENM
Sbjct: 209 IDMPPGTGDIHLSMLENYHLDGVIIVTTPQKISEIDVIRSIDLYQKLNLPILGIIENMS- 267
Query: 351 FDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGD 392
Y F SG + Q++ IP + +PI P ++ + D
Sbjct: 268 --------YMFESNSGGHLSQKYNIPLIAQIPIMPQIADACD 301
>sp|O58667|Y949_PYRHO Uncharacterized ATP-binding protein PH0949 OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=PH0949 PE=3 SV=1
Length = 295
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 150/260 (57%), Gaps = 18/260 (6%)
Query: 181 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKR 240
+AV S KGGVGKSTVAVNL LA MG VGI DAD++GP++ M+ + E+ EK
Sbjct: 33 IAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMLGVDKE--EVYAEKF 90
Query: 241 -----TIIP--TEYLG----VKLVSFGFS--GQGRAIMRGPMVSGVINQLLTTTEWGELD 287
+IP T+++G +K++S G I RGP+V+ I QLL +WG LD
Sbjct: 91 DDGHFEMIPPTTDFMGQVTPIKVMSMGMMVPEDQPVIWRGPLVTKAIKQLLGDVKWGSLD 150
Query: 288 YLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVEN 347
+++ID PPGTGD LT+ Q + L AA+IVTTPQ++A +D K V M K++VP +AVVEN
Sbjct: 151 FMIIDFPPGTGDEILTVVQSIKLDAAIIVTTPQEVALLDTGKAVNMMKKMEVPYVAVVEN 210
Query: 348 MCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGE 405
M + G + FG G G ++ Q+ G+ L +PI + D G+P V +
Sbjct: 211 MSYLICPHCGNKIDIFGEGGGEKLAQKEGVDFLGKIPIDLKAREASDLGIPIVLYEDT-P 269
Query: 406 VANTFQDLGVCVVQQCAKIR 425
A F +L +V + +I+
Sbjct: 270 AAKAFMELAEKLVNKLKEIK 289
>sp|Q92JA4|MRP_RICCN Protein mrp homolog OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=mrp PE=3 SV=1
Length = 319
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 162/303 (53%), Gaps = 25/303 (8%)
Query: 94 DPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKV 153
D F +++S +K I ++ ++S + +L +K + + NE I VNK+
Sbjct: 20 DGTFLNEVISDIIIKGNNIGFSI-DISGKNKLEAEEIRLKAI--NKLNE----ISEVNKI 72
Query: 154 NVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIF 213
+ + ++ ++ + I+ V+S KGGVGKST++ +A L+ RVGI
Sbjct: 73 TIVFTESKPMEKKVQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLANYRVGIV 132
Query: 214 DADVYGPSLPTMVSPENRLLEMNPEKR--TIIPTEYLGVKLVSFGF--SGQGRAIMRGPM 269
DAD+YGPS+P + + P+ + IIP ++++S GF I RGPM
Sbjct: 133 DADIYGPSIPHIFG-----INEVPQTKDGRIIPVLAQSIEIISIGFFVKDHSAIIWRGPM 187
Query: 270 VSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAK 329
S I QLL+ T+W LDYL+IDMPPGTGDI L++ + L +IVTTPQK++ IDV +
Sbjct: 188 ASKTIYQLLSVTKWDNLDYLIIDMPPGTGDIHLSILENYHLDGVIIVTTPQKISEIDVIR 247
Query: 330 GVRMFSKLKVPCIAVVENMCHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSA 389
+ ++ KL +P + ++ENM Y SG + Q++ IP + +PI P ++
Sbjct: 248 SIDLYQKLNLPILGIIENMS---------YMLKNNSGGHLSQKYNIPLIAQMPITPQIAE 298
Query: 390 SGD 392
+ D
Sbjct: 299 ACD 301
>sp|Q8TB37|NUBPL_HUMAN Iron-sulfur protein NUBPL OS=Homo sapiens GN=NUBPL PE=1 SV=3
Length = 319
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 155/267 (58%), Gaps = 16/267 (5%)
Query: 165 IFAEQLPEG--LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR--VGIFDADVYGP 220
I + LP+ ++ + ++ V+S KGGVGKST AVNLA LA + +G+ D DVYGP
Sbjct: 52 IMSRGLPKQKPIEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGP 111
Query: 221 SLPTMVSPENRLLEMNPE---KRTIIPTEYLGVKLVSFGFSGQGR--AIMRGPMVSGVIN 275
S+P M++ L+ NPE + P G+ +S GF + + RG MV I
Sbjct: 112 SVPKMMN-----LKGNPELSQSNLMRPLLNYGIACMSMGFLVEESEPVVWRGLMVMSAIE 166
Query: 276 QLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS 335
+LL +WG+LDYLV+DMPPGTGD+QL++ Q +P+T AVIV+TPQ +A +D KG MF
Sbjct: 167 KLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHKGAEMFR 226
Query: 336 KLKVPCIAVVENMCHFDADGKRY--YPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDS 393
++ VP + +V+NM F ++ + FG ++ Q G+ L D+P+ + + D+
Sbjct: 227 RVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDT 286
Query: 394 GMPEVAADPCGEVANTFQDLGVCVVQQ 420
G P V + P + A + + V VV++
Sbjct: 287 GQPIVFSQPESDEAKAYLRIAVEVVRR 313
>sp|Q9CWD8|NUBPL_MOUSE Iron-sulfur protein NUBPL OS=Mus musculus GN=Nubpl PE=2 SV=2
Length = 319
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 153/267 (57%), Gaps = 16/267 (5%)
Query: 165 IFAEQLPEG--LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR--VGIFDADVYGP 220
I + LP+ ++ + ++ V+S KGGVGKST AVNLA LA + VG+ D DVYGP
Sbjct: 52 IMSRGLPKQKPIEGVREVIVVASGKGGVGKSTTAVNLALALAANDSSKAVGLLDVDVYGP 111
Query: 221 SLPTMVSPENRLLEMNPE---KRTIIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVIN 275
S+P M++ L NPE + P G+ +S GF + A + RG MV I
Sbjct: 112 SIPKMMN-----LRGNPELSPNNLMRPLLNYGIACMSMGFLVEETAPLVWRGLMVMSAIE 166
Query: 276 QLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS 335
+LL +WG+LDYLV+DMPPGTGD+QL++ Q +P++ AVIV+TPQ +A +D KG MF
Sbjct: 167 KLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPISGAVIVSTPQDIALMDAHKGAEMFR 226
Query: 336 KLKVPCIAVVENMCHFDADGKRY--YPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDS 393
K+ VP + +V+NM F ++ + FG ++ Q + L D+P+ ++ + D
Sbjct: 227 KVNVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLDLDVLGDVPLHLSIREASDM 286
Query: 394 GMPEVAADPCGEVANTFQDLGVCVVQQ 420
G P V + P + A + + VV++
Sbjct: 287 GQPVVFSQPGSDEAKAYLHIASEVVRR 313
>sp|P50863|SALA_BACSU Protein mrp homolog SalA OS=Bacillus subtilis (strain 168) GN=salA
PE=2 SV=1
Length = 352
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 168/316 (53%), Gaps = 19/316 (6%)
Query: 82 ENDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRAN 141
E++V K + ++ +P + VK+++I +S ++ L + +Q
Sbjct: 4 EDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIV 63
Query: 142 EVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQK----ISN---IVAVSSCKGGVGKST 194
V L V + P + + P +K + N +AV+S KGGVGKST
Sbjct: 64 NV-LKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKST 122
Query: 195 VAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNP--EKRTIIPTEYLGVKL 252
V+VNLA +LA +G +VG+ DAD+YG S+P M+ + + P E ++P E GVK+
Sbjct: 123 VSVNLAISLARLGKKVGLIDADIYGFSVPDMMG-----ITVRPTIEGEKLLPVERFGVKV 177
Query: 253 VSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPL 310
+S GF + A + RGPM+ ++N EWGE+DY+V+D+PPGTGD+ L + ++P
Sbjct: 178 MSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPPGTGDVALDVHTMLPS 237
Query: 311 TAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDA--DGKRYYPFGRGSGSQ 368
+IV+TP A A+ M K + V+ENM ++++ G+R Y FG+G G +
Sbjct: 238 CKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGEREYVFGKGGGDK 297
Query: 369 VVQQFGIPHLFDLPIR 384
+ ++ +P L +P++
Sbjct: 298 LAEELNVPLLGRIPLK 313
>sp|Q6CE48|IND1_YARLI Iron-sulfur protein IND1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=IND1 PE=1 SV=1
Length = 312
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 150/264 (56%), Gaps = 16/264 (6%)
Query: 139 RANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVN 198
R++E L IP + ++ P P + PE + + + VSS KGGVGKSTV+VN
Sbjct: 34 RSHENPLGIPK------SPASAPRIPRKTTRRPEPIAGVKKTIVVSSAKGGVGKSTVSVN 87
Query: 199 LAYTLAGMGARVGIFDADVYGPSLPTM--VSPENRLLEMNPEKRTIIPTEYLGVKLVSFG 256
A +LA G RVG+ D D++GPS+PTM +S E R+ + +IP G++++S G
Sbjct: 88 TALSLAKRGLRVGLLDVDIFGPSIPTMFGLSGEPRMTH----EGKLIPMSKFGIQVMSMG 143
Query: 257 F-SGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAV 314
F +A+ RG +V + QLL +WG LD LV+D+PPGTGD+QLT+ Q V + A+
Sbjct: 144 FLVDPNKAVAWRGLLVQKALEQLLQDVDWGTLDVLVMDLPPGTGDVQLTIAQTVKIDGAI 203
Query: 315 IVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDADGKRY--YPFGRGSGSQVVQQ 372
IV+TPQ +A +DV +G+ +F K + +V+NM F + + FG +
Sbjct: 204 IVSTPQDVALVDVVRGLDLFEKTYTKVLGLVQNMSVFVCPNCNHETHIFGVDGAVSKAKS 263
Query: 373 FGIPHLFDLPIRPTLSASGDSGMP 396
G+ L ++P+ P + + D G+P
Sbjct: 264 RGLGVLGNVPLDPQICSQSDKGVP 287
>sp|Q9V0D9|Y851_PYRAB Uncharacterized ATP-binding protein PYRAB08510 OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB08510 PE=3 SV=1
Length = 295
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 137/233 (58%), Gaps = 17/233 (7%)
Query: 181 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKR 240
VAV S KGGVGKSTVAVNL LA MG VGI DAD++GP++ M+ E E+ EK
Sbjct: 33 VAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMLGVEKE--EIYAEKF 90
Query: 241 -----TIIP--TEYLG----VKLVSFGFS--GQGRAIMRGPMVSGVINQLLTTTEWGELD 287
+IP +++G +K++S G I RG +V+ I QLL +WG LD
Sbjct: 91 DDGHFEMIPPMADFMGQVTPIKVMSMGMMVPEDQPIIWRGALVTKAIKQLLGDVKWGSLD 150
Query: 288 YLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVEN 347
+++ID PPGTGD LT+ Q + L AA+IVTTPQ++A +D K V M K++VP IAVVEN
Sbjct: 151 FMIIDFPPGTGDEILTVVQSIQLDAAIIVTTPQEVALLDTGKAVNMMKKMEVPYIAVVEN 210
Query: 348 MCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEV 398
M + G + FG G G ++ ++ G+ L +PI + D G+P V
Sbjct: 211 MSYLICPHCGNKIDIFGEGGGEKLAEKEGVDFLGKIPIDLKAREASDLGIPIV 263
>sp|P53381|MRP_CLOPE Protein mrp homolog OS=Clostridium perfringens (strain 13 / Type A)
GN=mrp PE=3 SV=2
Length = 284
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 14/247 (5%)
Query: 169 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSP 228
+L I N++ V S KGGVGKSTV LA LA G +VG+ DAD+ GPS+P
Sbjct: 29 KLGTNYGNIKNVIGVISGKGGVGKSTVTGILATQLAKKGYKVGVLDADITGPSMPRFFGI 88
Query: 229 ENR---LLEMNPEKRTI----IPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLL 278
+ ++ M+ E + + + TE LG+K++S + I RGPMV+GV+NQ+
Sbjct: 89 NEKRADIVAMDSEGKQVKFVPVKTE-LGIKVISMNLLMEVEDDPVIWRGPMVTGVLNQMF 147
Query: 279 TTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLK 338
T+W ELDYL+IDMPPGT DI LT+ Q P+ VIV+TPQ + + V K V M K+
Sbjct: 148 KDTDWEELDYLLIDMPPGTSDITLTVMQTFPIKELVIVSTPQDMVSMIVKKLVTMAHKMN 207
Query: 339 VPCIAVVENMCHFDAD-GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPE 397
V VVENM + + + GK+ F + S + + G+P + +LPI L+ + ++G E
Sbjct: 208 VCVRGVVENMAYIECECGKKMRVFSKKSSEEHAEYLGLPLIGELPINLDLTEALENGKAE 267
Query: 398 --VAADP 402
VA +P
Sbjct: 268 EYVAENP 274
>sp|Q8U1R0|Y1145_PYRFU Uncharacterized ATP-binding protein PF1145 OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1145 PE=3 SV=1
Length = 295
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 146/260 (56%), Gaps = 18/260 (6%)
Query: 181 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEK- 239
+AV S KGGVGKSTVAVNL LA MG VGI DAD++GP++ M N ++ EK
Sbjct: 33 IAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMFGIGNT--DIYAEKF 90
Query: 240 -----RTIIPT-EYLG----VKLVSFGFS--GQGRAIMRGPMVSGVINQLLTTTEWGELD 287
I PT +++G +K++S G I RG +V+ I QLL WGELD
Sbjct: 91 EDGHFEMIPPTVDFMGQVTPIKVMSMGMMVPEDQPIIWRGSLVTKAIKQLLGDVMWGELD 150
Query: 288 YLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVEN 347
+++ID PPGTGD LT+ Q + L AA++VTTPQ++A +D K V M K++VP IAV+EN
Sbjct: 151 FMIIDFPPGTGDEILTVVQSIQLDAAIVVTTPQEVALLDTGKAVNMMKKMEVPYIAVIEN 210
Query: 348 MCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGE 405
M + G + FG G G ++ ++ G+ L +PI + D G+P V
Sbjct: 211 MSYLICPHCGNKIDIFGEGGGEKLAEKEGVDFLGKVPIDLKAREASDLGIPIVLYGDT-P 269
Query: 406 VANTFQDLGVCVVQQCAKIR 425
A F ++ +V + +I+
Sbjct: 270 AAKAFMEIAEKLVNKLKEIK 289
>sp|Q68XP6|MRP_RICTY Protein mrp homolog OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=mrp PE=3 SV=1
Length = 318
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 149/297 (50%), Gaps = 37/297 (12%)
Query: 103 SCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPA 162
+ GF D+ L RL+ IKD VN + + + +
Sbjct: 37 NIGFSIDISGKNKLEAEEIRLKAINELNNIKD---------------VNNITIVFTQKKT 81
Query: 163 RPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSL 222
A++ ++ + I+ V+S KGGVGKST++ +A L+ +VGI DAD+YGPS+
Sbjct: 82 IDKKAQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLENYQVGIVDADIYGPSI 141
Query: 223 PTMVSPENRLLEMNPEKRT----IIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQ 276
P + +N +T IIP ++++S GF I RGPM S +I Q
Sbjct: 142 P-------HIFGINEIPKTVEGRIIPILAQNIQIISIGFFVKAHSAIIYRGPMASKIIYQ 194
Query: 277 LLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSK 336
LL+ T W LDYL+IDMPPGTGDI L++ + L ++VTTPQK++ IDV + + ++ K
Sbjct: 195 LLSNTRWNNLDYLIIDMPPGTGDIHLSMLENYHLDGVIVVTTPQKISEIDVIRSIDLYRK 254
Query: 337 LKVPCIAVVENMCHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDS 393
L +P + ++ENM Y + +++ IP + +PI P ++ + D
Sbjct: 255 LGLPILGIIENMI---------YMLESDRCGHLSKKYNIPLIAKIPIIPQIANACDK 302
>sp|Q9ZE27|MRP_RICPR Protein mrp homolog OS=Rickettsia prowazekii (strain Madrid E)
GN=mrp PE=3 SV=1
Length = 318
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 139/250 (55%), Gaps = 16/250 (6%)
Query: 147 IPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGM 206
I VNK+ + + A++ ++ + I+ V+S KGGVGKST++ +A L+
Sbjct: 66 IKEVNKITIVFTQSKTIDKKAQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLE 125
Query: 207 GARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAI 264
RVGI DAD+YGPS+P + + E R I+P ++++S GF I
Sbjct: 126 NYRVGIVDADIYGPSIPHIFGING--IPKTVEGR-IVPILAQNIQIISIGFFVKAHSAII 182
Query: 265 MRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAF 324
RGPM S +I QLL+ T W LDYL+IDMPPGTGDI L++ + L ++VTT QK++
Sbjct: 183 YRGPMASKIIYQLLSNTRWNNLDYLIIDMPPGTGDIHLSIIENYHLDGVIVVTTQQKISE 242
Query: 325 IDVAKGVRMFSKLKVPCIAVVENMCH-FDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPI 383
IDV + + ++ KL +P + ++ENM + ++D Y +++ IP + +PI
Sbjct: 243 IDVIRSIDLYRKLGLPILGIIENMIYMLESDHCGYLS----------KKYHIPLIAQIPI 292
Query: 384 RPTLSASGDS 393
P ++ + D
Sbjct: 293 MPQIANACDK 302
>sp|P65441|MRP_MYCTU Protein mrp homolog OS=Mycobacterium tuberculosis GN=mrp PE=3 SV=1
Length = 381
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 181/362 (50%), Gaps = 31/362 (8%)
Query: 78 TGTAEND----VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIK 133
+GT + D + AL ++IDP+ I G VK + G V + LT CP K
Sbjct: 2 SGTRDGDLNAAIRTALGKVIDPELRRPITELGMVKSIDTGPD-GSVHVEIYLTIAGCPKK 60
Query: 134 DMFEQRANEVVLAIPWVNKVNVTMS--AQPARPIFAEQLPEGLQK----------ISNIV 181
+R V +P + V V++ + R +QL ++ ++ +
Sbjct: 61 SEITERVTRAVADVPGTSAVRVSLDVMSDEQRTELRKQLRGDTREPVIPFAQPDSLTRVY 120
Query: 182 AVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT 241
AV+S KGGVGKSTV VNLA +A G +G+ DAD++G S+P M+ +R ++ +
Sbjct: 121 AVASGKGGVGKSTVTVNLAAAMAVRGLSIGVLDADIHGHSIPRMMGTTDRPTQV---ESM 177
Query: 242 IIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 299
I+P VK++S QG + RGPM+ + Q L WG+LD L++D+PPGTGD
Sbjct: 178 ILPPIAHQVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGTGD 237
Query: 300 IQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS-KLKVPCIAVVENMCHFDA-DGKR 357
+ +++ Q++P ++VTTPQ LA +VA+ + + + + VVENM DG
Sbjct: 238 VAISVAQLIPNAELLVVTTPQ-LAAAEVAERAGSIALQTRQRIVGVVENMSGLTLPDGTT 296
Query: 358 YYPFGRGSGSQVVQQFG------IPHLFDLPIRPTLSASGDSGMPEVAADPCGEVANTFQ 411
FG G G V ++ +P L +P+ P L A+GDSG+P V + P +
Sbjct: 297 MQVFGEGGGRLVAERLSRAVGADVPLLGQIPLDPALVAAGDSGVPLVLSSPDSAIGKELH 356
Query: 412 DL 413
+
Sbjct: 357 SI 358
>sp|P65442|MRP_MYCBO Protein mrp homolog OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=mrp PE=3 SV=1
Length = 381
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 181/362 (50%), Gaps = 31/362 (8%)
Query: 78 TGTAEND----VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIK 133
+GT + D + AL ++IDP+ I G VK + G V + LT CP K
Sbjct: 2 SGTRDGDLNAAIRTALGKVIDPELRRPITELGMVKSIDTGPD-GSVHVEIYLTIAGCPKK 60
Query: 134 DMFEQRANEVVLAIPWVNKVNVTMS--AQPARPIFAEQLPEGLQK----------ISNIV 181
+R V +P + V V++ + R +QL ++ ++ +
Sbjct: 61 SEITERVTRAVADVPGTSAVRVSLDVMSDEQRTELRKQLRGDTREPVIPFAQPDSLTRVY 120
Query: 182 AVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT 241
AV+S KGGVGKSTV VNLA +A G +G+ DAD++G S+P M+ +R ++ +
Sbjct: 121 AVASGKGGVGKSTVTVNLAAAMAVRGLSIGVLDADIHGHSIPRMMGTTDRPTQV---ESM 177
Query: 242 IIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 299
I+P VK++S QG + RGPM+ + Q L WG+LD L++D+PPGTGD
Sbjct: 178 ILPPIAHQVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGTGD 237
Query: 300 IQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS-KLKVPCIAVVENMCHFDA-DGKR 357
+ +++ Q++P ++VTTPQ LA +VA+ + + + + VVENM DG
Sbjct: 238 VAISVAQLIPNAELLVVTTPQ-LAAAEVAERAGSIALQTRQRIVGVVENMSGLTLPDGTT 296
Query: 358 YYPFGRGSGSQVVQQFG------IPHLFDLPIRPTLSASGDSGMPEVAADPCGEVANTFQ 411
FG G G V ++ +P L +P+ P L A+GDSG+P V + P +
Sbjct: 297 MQVFGEGGGRLVAERLSRAVGADVPLLGQIPLDPALVAAGDSGVPLVLSSPDSAIGKELH 356
Query: 412 DL 413
+
Sbjct: 357 SI 358
>sp|Q6CQV4|CFD1_KLULA Cytosolic Fe-S cluster assembly factor CFD1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=CFD1 PE=3 SV=1
Length = 283
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 128/230 (55%), Gaps = 13/230 (5%)
Query: 170 LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPE 229
+PE L+ I +I+ V S KGGVGKS+V A TL G +VG+ D D+ GPSLP M E
Sbjct: 10 MPESLKDIKHIILVLSGKGGVGKSSVTTQTALTLCLKGYKVGVLDIDLTGPSLPRMFGLE 69
Query: 230 NRLLEMNPEKRTI---IPTEYLG-VKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTE 282
N+ + K I +PT G +KL+S GF R + RGP S +I Q + +
Sbjct: 70 NKQV-YQASKGWIPVSVPTTSGGELKLMSLGFLLDDRGNSVVWRGPKKSAMIKQFIKDVD 128
Query: 283 WGELDYLVIDMPPGTGDIQLTLCQVVPLTA---AVIVTTPQKLAFIDVAKGVRMFSKLKV 339
WG+LDYL+ID PPGT D +++ + + A A+IVTTPQ +A DV K + K+
Sbjct: 129 WGDLDYLIIDTPPGTSDEHISIAEELRWAAPDGAIIVTTPQGVATADVRKEINFCKKVNF 188
Query: 340 PCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTL 387
+ V+ENM F + F RG G ++ ++ +P+L ++PI PT
Sbjct: 189 NILGVIENMSGFICPHCAECTDIFSRGGGFKLASEYNVPYLGNIPIDPTF 238
>sp|A7SE07|NUBP2_NEMVE Cytosolic Fe-S cluster assembly factor NUBP2 homolog
OS=Nematostella vectensis GN=v1g229988 PE=3 SV=1
Length = 270
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 9/234 (3%)
Query: 170 LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPE 229
+P+GL+ + +I+ V S KGGVGKSTVA L++ L G +VG+ D D+ GPS+P M++ E
Sbjct: 5 VPQGLRSVKHIILVLSGKGGVGKSTVATQLSWALYNQGNKVGLLDIDLCGPSIPRMMNVE 64
Query: 230 NRLLEMNPEKRTII---PTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGE 285
N + + + P + LGV + F + A++ RGP + +I Q L+ WG+
Sbjct: 65 NNDVHQCSDGWVPVYTGPDQRLGVMSIGFLLHSKEDAVVWRGPKKNAMIKQFLSDVCWGD 124
Query: 286 LDYLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLKVPCI 342
+DYL+ID PPGT D +T+ + + A++VTTPQ +A DV + + K K+P +
Sbjct: 125 IDYLIIDTPPGTSDEHITVVENLKTCHPDGAILVTTPQGVAISDVRREITFCKKTKIPVL 184
Query: 343 AVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 394
+VENM F + F +G G + ++ +P L +P+ P L+ + + G
Sbjct: 185 GIVENMSGFVCPHCSECTNVFSKGGGEALAKECEVPFLGCIPLDPNLTMNIEDG 238
>sp|P40558|CFD1_YEAST Cytosolic Fe-S cluster assembly factor CFD1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CFD1 PE=1
SV=1
Length = 293
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 18/276 (6%)
Query: 174 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 233
L I +I+ + S KGGVGKS+V A TL MG +VG+ D D+ GPSLP M EN +
Sbjct: 13 LAGIKHIILILSGKGGVGKSSVTTQTALTLCSMGFKVGVLDIDLTGPSLPRMFGLENESI 72
Query: 234 EMNPE--KRTIIPTEYLG-VKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELD 287
PE + + T G + ++S GF R I RGP + +I Q ++ WGELD
Sbjct: 73 YQGPEGWQPVKVETNSTGSLSVISLGFLLGDRGNSVIWRGPKKTSMIKQFISDVAWGELD 132
Query: 288 YLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAV 344
YL+ID PPGT D +++ + + + ++VTTPQ +A DV K + K+ + + +
Sbjct: 133 YLLIDTPPGTSDEHISIAEELRYSKPDGGIVVTTPQSVATADVKKEINFCKKVDLKILGI 192
Query: 345 VENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADP 402
+ENM F + F G G ++ +QF +P+L ++PI P M E
Sbjct: 193 IENMSGFVCPHCAECTNIFSSGGGKRLSEQFSVPYLGNVPIDPKFVE-----MIENQVSS 247
Query: 403 CGEVANTFQDLGVCVV--QQCAKIRQQVSTAVIYDK 436
+ +++ +C + + K+R+Q +T + DK
Sbjct: 248 KKTLVEMYRESSLCPIFEEIMKKLRKQDTTTPVVDK 283
>sp|Q6FPP7|CFD1_CANGA Cytosolic Fe-S cluster assembly factor CFD1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=CFD1 PE=3 SV=1
Length = 285
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 123/225 (54%), Gaps = 15/225 (6%)
Query: 174 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 233
L I +I+ V S KGGVGKS+V A TL GMG VG+ D D+ GPSLP M E+ +
Sbjct: 18 LSLIKHILLVLSGKGGVGKSSVTTQTALTLCGMGYNVGVLDIDLTGPSLPRMFGIEDSSI 77
Query: 234 EMNPEKRTIIPTEYLG---VKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELD 287
+ + IP E G + +VS GF R + RGP + +I Q + WGELD
Sbjct: 78 YQSADGWMPIPVETNGKGKLCVVSLGFLLGSRGTSVVWRGPKKTSMIRQFIKDVTWGELD 137
Query: 288 YLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAV 344
YL+ID PPGT D +++ + + T A++VTTPQ +A DV K + K+ + + V
Sbjct: 138 YLLIDTPPGTSDEHISIAEELRFTNPDGAIVVTTPQGVATADVKKEINFCRKVNLRILGV 197
Query: 345 VENM----CHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRP 385
+ENM C + + F +G G + +QF +P+L ++PI P
Sbjct: 198 IENMSGFVCPYCTECTNI--FSKGGGESLAKQFDVPYLGNIPIDP 240
>sp|Q93459|NUBP1_CAEEL Cytosolic Fe-S cluster assembly factor NUBP1 homolog
OS=Caenorhabditis elegans GN=F10G8.6 PE=3 SV=2
Length = 313
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 138/256 (53%), Gaps = 11/256 (4%)
Query: 169 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMVS 227
++ + +I + + + S KGGVGKST+ NLA LA ++ V I D D+ GPS P M+
Sbjct: 49 KIQDRFSRIKHKILILSGKGGVGKSTLTSNLARALASDPSKQVAILDVDICGPSQPRMMG 108
Query: 228 PENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGE 285
E+ + + + T + + L + ++F + A++ RG +G+I Q L +WGE
Sbjct: 109 VEDEEVHNSADGWTPVGIQPNLTLMSIAFLLGDKNDAVIWRGARKNGMIKQFLKDVDWGE 168
Query: 286 LDYLVIDMPPGTGDIQLTLCQVV----PLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 341
+DYL+ID PPGT D ++L Q + PL A+IV+TPQ+++ +DV K V K KVP
Sbjct: 169 VDYLLIDTPPGTSDEHISLVQFLLQAGPLDGALIVSTPQEVSLLDVRKEVSFCVKTKVPI 228
Query: 342 IAVVENMCHF----DADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPE 397
+ VVENM F A +P G Q+ + + L LP+ P L+ + D+G
Sbjct: 229 LGVVENMARFVCPNCAHTTLLFPTSTGGAEQMCKDSNLELLAQLPLEPALAKALDNGEDF 288
Query: 398 VAADPCGEVANTFQDL 413
+P +A +F DL
Sbjct: 289 FETNPDSTLAKSFLDL 304
>sp|Q7QGS3|NUBP2_ANOGA Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Anopheles
gambiae GN=AGAP010873 PE=3 SV=4
Length = 259
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 129/249 (51%), Gaps = 9/249 (3%)
Query: 174 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 233
L K+ +I+ V S KGGVGKSTV+ LA TLA +VG+ D D+ GPS+P ++ E+R +
Sbjct: 2 LDKVKHIILVLSGKGGVGKSTVSTQLALTLAEADHKVGLLDIDLCGPSVPYLLGLEDRDV 61
Query: 234 EMNPEKRT-IIPTEYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 289
E + + + ++S GF + R+ I RGP + +I Q L W ELDYL
Sbjct: 62 HQCDEGWVPVYTSAEKRLAVMSIGFLLKNRSDAVIWRGPKKTAMIKQFLEDVNWDELDYL 121
Query: 290 VIDMPPGTGDIQLTLCQ---VVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 346
+ID PPGT D +T+ + V A+IVTTPQ++A DV K V K +P + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLKTVRTEGAIIVTTPQEMALEDVRKEVTFCKKTGIPILGIVE 181
Query: 347 NMCHFDADG--KRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCG 404
NM F + F G G + + +PHL LPI P + +G V P
Sbjct: 182 NMSGFVCPNCSECTNIFSSGGGHSLAELAKVPHLGTLPIDPRVGELAGTGKACVKELPDC 241
Query: 405 EVANTFQDL 413
+ ++L
Sbjct: 242 TTSEVLREL 250
>sp|A8WWQ7|NUBP1_CAEBR Cytosolic Fe-S cluster assembly factor NUBP1 homolog
OS=Caenorhabditis briggsae GN=CBG03788 PE=3 SV=1
Length = 313
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 11/256 (4%)
Query: 169 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMVS 227
++ + +I + + + S KGGVGKST+ NLA LA ++ V I D D+ GPS P M+
Sbjct: 49 KIQDRFSRIKHKILILSGKGGVGKSTLTSNLARALASDPSKQVAILDVDICGPSQPRMMG 108
Query: 228 PENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGE 285
E+ + + + T + + L + ++F + A++ RG +G+I Q L +WGE
Sbjct: 109 VEDEEVHNSADGWTPVGIQPNLTLMSIAFLIGDKNDAVIWRGARKNGMIKQFLKDVDWGE 168
Query: 286 LDYLVIDMPPGTGDIQLTLCQVV----PLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 341
+DYL+ID PPGT D ++L Q + PL A+IV+TPQ+++ +DV K V K KVP
Sbjct: 169 VDYLLIDTPPGTSDEHISLVQFLLQAGPLDGALIVSTPQEVSLLDVRKEVSFCIKTKVPI 228
Query: 342 IAVVENMCHF----DADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPE 397
+ VVENM F A +P G ++ + + L LP+ P L+ + D+G
Sbjct: 229 LGVVENMARFVCPNCAHTTLLFPTSTGGAEKMCEDSNLELLAQLPLEPALAEALDNGEDF 288
Query: 398 VAADPCGEVANTFQDL 413
+P +A +F DL
Sbjct: 289 FETNPDSTLAKSFMDL 304
>sp|Q8T2F3|NUBP1_DICDI Cytosolic Fe-S cluster assembly factor NUBP1 homolog
OS=Dictyostelium discoideum GN=nubp1 PE=3 SV=1
Length = 315
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 133/254 (52%), Gaps = 12/254 (4%)
Query: 169 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMVS 227
++ E ++ + N + V S KGGVGKST + L++ L+ VG+ D D+ GPS+P ++
Sbjct: 49 EIEERMKTVKNKILVLSGKGGVGKSTFSSQLSFALSMDEKVEVGLLDIDICGPSIPKIMG 108
Query: 228 PENRLLEMNPEK-RTIIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGE 285
E + ++ + + + L V V F + A++ RGP +G+I Q L W +
Sbjct: 109 LEGENIHISGQGWDPVYVQDNLAVMSVGFLLEKEEDAVIWRGPKKNGIIKQFLKDVYWND 168
Query: 286 LDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCI 342
LDYLVID PPGT D L++ Q + L+ AVIVT+PQ +A IDV K + K+ VP I
Sbjct: 169 LDYLVIDTPPGTSDEHLSIVQYLKTSNLSGAVIVTSPQDVALIDVRKEINFCKKVGVPII 228
Query: 343 AVVENMCHF-----DADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPE 397
VVENM F + + + + P G ++ Q +P L +PI P ++ S D G
Sbjct: 229 GVVENMSGFVCPKCNKESQIFIPT-TGGAEKMSQDMNVPFLGRIPIDPLIARSCDEGKSY 287
Query: 398 VAADPCGEVANTFQ 411
+ P E +
Sbjct: 288 LITHPNSEATKQYN 301
>sp|Q75AC3|CFD1_ASHGO Cytosolic Fe-S cluster assembly factor CFD1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=CFD1 PE=3 SV=2
Length = 281
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 122/231 (52%), Gaps = 16/231 (6%)
Query: 171 PEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPEN 230
PE L++I +IV V S KGGVGKS+V L LA G +VGI D D+ GPSLP MV E
Sbjct: 9 PESLREIEHIVLVLSGKGGVGKSSVTTQLGMALACRGLKVGILDIDLTGPSLPRMVGMEG 68
Query: 231 RLLEMNPEKRTIIPT------EYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTT 281
+ + P R IP E ++++S GF R + RGP + +I Q ++
Sbjct: 69 KSVLQGP--RGWIPVDVPTGMEQGCLRVMSLGFLLDDRGDSVVWRGPKKTAMIKQFISDV 126
Query: 282 EWGELDYLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLK 338
WG LDYL+ID PPGT D +++ + + A+IV+TPQK+A DV K + K+
Sbjct: 127 YWGALDYLLIDTPPGTSDEHISIAEELRGARPDGAIIVSTPQKVAVADVKKEINFCRKVN 186
Query: 339 VPCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTL 387
+ VVENM F + F RG G + + G+P L +PI P
Sbjct: 187 FKLLGVVENMSGFVCPHCSECTNIFARGGGESLALESGVPFLGTVPIDPAF 237
>sp|B4IYG8|NUBP2_DROGR Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
grimshawi GN=GH14587 PE=3 SV=1
Length = 264
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 126/237 (53%), Gaps = 12/237 (5%)
Query: 174 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-L 232
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E R +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPYLLGLEGRDI 61
Query: 233 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 289
+ + I E + ++S GF + R I RGP + +I Q L+ +W ELDYL
Sbjct: 62 FQCDDGWVPIYTDESKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIKQFLSDVKWDELDYL 121
Query: 290 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 346
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLREVPCNGAIIVTTPQGVALDDVRKEITFCKKTGIKLLGIVE 181
Query: 347 NMCHFDADG--KRYYPFGRGSGSQVVQQFGIPHLFDLPIRP---TLSASGDSGMPEV 398
NM F + F G+++ +PHL LPI P L+ S S + E+
Sbjct: 182 NMSGFVCPHCTECTNIFSSNGGAELANLAQVPHLGTLPIDPRVGVLAGSTASALDEL 238
>sp|Q5I0L4|NUBP1_RAT Cytosolic Fe-S cluster assembly factor NUBP1 OS=Rattus norvegicus
GN=Nubp1 PE=2 SV=1
Length = 320
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 131/237 (55%), Gaps = 10/237 (4%)
Query: 168 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMG-ARVGIFDADVYGPSLPTMV 226
E++ E ++ + + + V S KGGVGKST + +LA+ LA G +V + D D+ GPS+P ++
Sbjct: 44 EEIREKMKTVRHRILVLSGKGGVGKSTFSAHLAHGLAEDGDTQVALLDIDICGPSIPKIM 103
Query: 227 SPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 284
E + + + + E LGV V F S A++ RGP +G+I Q L +WG
Sbjct: 104 GLEGEQVHQSGSGWSPVYVEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 163
Query: 285 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 341
++DYLVID PPGT D L++ Q + + AVI+TTPQ++A DV K + K+K+P
Sbjct: 164 DVDYLVIDTPPGTSDEHLSVVQYLAAAHIDGAVILTTPQEVALQDVRKEISFCHKVKLPI 223
Query: 342 IAVVENMCHFDA-DGKR---YYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 394
I VVENM F KR +P G + Q IP L +P+ P + S D G
Sbjct: 224 IGVVENMSGFICPKCKRESQIFPPTTGGAEAMCQALKIPLLGKVPLDPHIGKSCDKG 280
>sp|Q24K00|NUBP1_BOVIN Cytosolic Fe-S cluster assembly factor NUBP1 OS=Bos taurus GN=NUBP1
PE=2 SV=1
Length = 320
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 129/237 (54%), Gaps = 10/237 (4%)
Query: 168 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMV 226
E++ E ++ + + + V S KGGVGKST + +LA+ LA +V + D D+ GPS+P ++
Sbjct: 44 EEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHGLAEDENTQVALLDIDICGPSIPKIM 103
Query: 227 SPENRLLEMNPEKRT-IIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 284
E + + + + + LGV V F S A++ RGP +G+I Q L +WG
Sbjct: 104 GLEGEQVHQSGSGWSPVFLEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 163
Query: 285 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 341
E+DYL++D PPGT D L++ Q + + AVI+TTPQ+++ DV K + K+K+P
Sbjct: 164 EVDYLIVDTPPGTSDEHLSVVQYLTAAHIDGAVIITTPQEVSLQDVRKEISFCHKVKLPI 223
Query: 342 IAVVENMCHFDA----DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 394
I VVENM F + +P G + Q IP L +P+ P + S D G
Sbjct: 224 IGVVENMSGFICPKCQKESQIFPPTTGGAEAMCQDLKIPLLGKVPLDPRIGKSCDKG 280
>sp|A7RUD5|NUBP1_NEMVE Cytosolic Fe-S cluster assembly factor NUBP1 homolog
OS=Nematostella vectensis GN=v1g236650 PE=3 SV=1
Length = 318
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 149/285 (52%), Gaps = 11/285 (3%)
Query: 154 NVTMSAQPARPI-FAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VG 211
+ S++PA P ++ E L + + + V S KGGVGKST +LA+ LA R V
Sbjct: 33 QICASSKPAPPDPDLGKIKERLSSVKHKILVLSGKGGVGKSTFTAHLAHGLAADEDRQVA 92
Query: 212 IFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPM 269
+ D D+ GPS+PT+ + + + + + E LGV V F + A++ RGP
Sbjct: 93 VLDIDICGPSIPTVFGLQGEQVHQSGSGWSPVYVEDNLGVMSVGFLLAKPTDAVIWRGPK 152
Query: 270 VSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFID 326
+G+I Q L +WG+ D+LV+D PPGT D L++ Q + T AV+VTTPQ+++ +D
Sbjct: 153 KNGLIKQFLRDVDWGDADFLVVDTPPGTSDEHLSIIQYLNQTEVDGAVVVTTPQEVSLLD 212
Query: 327 VAKGVRMFSKLKVPCIAVVENM----CHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLP 382
V K + K+++P I VVENM C + +P G ++ + +P L +P
Sbjct: 213 VRKEISFCKKVRLPVIGVVENMSVFVCPNCKKESQIFPPTTGGAEKMAVEMKVPFLGRIP 272
Query: 383 IRPTLSASGDSGMPEVAADPCGEVANTFQDLGVCVVQQCAKIRQQ 427
+ P + + D G ++ P ++++D+ +V+ C + Q
Sbjct: 273 LDPRIGRACDEGKSFLSEIPDSPATSSYKDIIEKIVKYCVASQHQ 317
>sp|B3RPX4|NUBP2_TRIAD Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Trichoplax
adhaerens GN=TRIADDRAFT_53697 PE=3 SV=1
Length = 265
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 127/230 (55%), Gaps = 13/230 (5%)
Query: 176 KISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEM 235
KI ++V + S KGGVGKSTVA +A LA G +VGI D D+ GPS+P ++ E++ ++
Sbjct: 12 KIKSVVLILSGKGGVGKSTVASQIALELANGGNKVGILDVDLCGPSIPRVLGLEDK--DV 69
Query: 236 NPEKRTIIP-----TEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYL 289
+ IP E L V + F A++ RGP + +I Q L+ WG+LDYL
Sbjct: 70 HQCADGWIPVYADKNEKLAVMSIGFLLRNSKDAVVWRGPKKNAMIKQFLSDVVWGDLDYL 129
Query: 290 VIDMPPGTGDIQLTLCQVV---PLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 346
+ID PPGT D +T+ + V LT AV+VTTPQ +A DV + + K+ +P + +VE
Sbjct: 130 IIDTPPGTSDEHITVAENVRGLNLTGAVMVTTPQAVALGDVRREITFCKKVGIPIVGIVE 189
Query: 347 NMCHFDADG--KRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 394
NM + + F +G G + Q +P L LP+ P L+ S + G
Sbjct: 190 NMSGYTCPNCSECTNIFSKGGGEALAQLTQVPFLGCLPLDPKLTMSIEDG 239
>sp|Q5EB25|NUBP1_XENTR Cytosolic Fe-S cluster assembly factor nubp1 OS=Xenopus tropicalis
GN=nubp1 PE=2 SV=1
Length = 320
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 129/237 (54%), Gaps = 10/237 (4%)
Query: 168 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMV 226
E++ E L + + + V S KGGVGKST + +LA+ LA ++ V + D D+ GPS+P M+
Sbjct: 48 EEIKEKLSSVKHKILVLSGKGGVGKSTFSAHLAHGLAQDESKEVALLDVDICGPSIPKMM 107
Query: 227 SPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 284
E + + + + E L V V F S A++ RGP +G+I Q L +WG
Sbjct: 108 GLEGEQVHQSGSGWSPVYVEDNLAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 167
Query: 285 ELDYLVIDMPPGTGDIQLTLCQ---VVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 341
E+DYL+ID PPGT D L++ Q V + AVI+TTPQ+++ DV K + K+K+P
Sbjct: 168 EVDYLIIDTPPGTSDEHLSVVQYLSVAGIDGAVIITTPQEVSLQDVRKEINFCHKVKLPI 227
Query: 342 IAVVENMCHFDA----DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 394
I VVENM F + + +P G ++ + L +P+ P + S D+G
Sbjct: 228 IGVVENMSGFICPKCKNESQIFPPTTGGAEKMCTDLNVSLLGKVPLDPNIGKSCDTG 284
>sp|Q6P298|NUBP1_DANRE Cytosolic Fe-S cluster assembly factor nubp1 OS=Danio rerio
GN=nubp1 PE=2 SV=2
Length = 321
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 140/265 (52%), Gaps = 10/265 (3%)
Query: 168 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMV 226
E++ + + + + + V S KGGVGKST + +L++ LA ++ V + D D+ GPS+P ++
Sbjct: 48 EEIKQKMTSVKHKILVLSGKGGVGKSTFSAHLSHALASDSSKEVALLDVDICGPSIPKIM 107
Query: 227 SPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 284
E + + + + E L V + F S A++ RGP +G+I Q L +WG
Sbjct: 108 GLEGEQVHQSGSGWSPVYVEDNLAVMSIGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 167
Query: 285 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 341
E+DYL++D PPGT D L++ Q + + AVI+TTPQ+++ DV K +R K+ +P
Sbjct: 168 EVDYLIVDTPPGTSDEHLSIVQYLSGAGIDGAVIITTPQEVSLQDVRKEIRFCKKVNLPI 227
Query: 342 IAVVENMCHFDA----DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPE 397
+ V+ENM F + + +P G ++ ++ +P L +P+ P + S D G
Sbjct: 228 LGVIENMSGFVCPKCKNTSQIFPPTTGGAQRMCEELNLPLLGRIPLDPRIGKSCDEGKSF 287
Query: 398 VAADPCGEVANTFQDLGVCVVQQCA 422
+ P A +Q + + CA
Sbjct: 288 LTEVPDSPAAAAYQSIVQKIRDYCA 312
>sp|Q9R060|NUBP1_MOUSE Cytosolic Fe-S cluster assembly factor NUBP1 OS=Mus musculus
GN=Nubp1 PE=1 SV=1
Length = 320
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 130/237 (54%), Gaps = 10/237 (4%)
Query: 168 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMG-ARVGIFDADVYGPSLPTMV 226
E++ E ++ + + + V S KGGVGKST + +LA+ LA G +V + D D+ GPS+P ++
Sbjct: 44 EEIREKMKTVRHKLLVLSGKGGVGKSTFSAHLAHGLAEDGDTQVALLDIDICGPSIPKIM 103
Query: 227 SPENRLLEMNPEKRT-IIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 284
E + + + + + LGV V F S A++ RGP +G+I Q L +WG
Sbjct: 104 GLEGEQVHQSGSGWSPVYVDDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 163
Query: 285 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 341
++DYL++D PPGT D L++ Q + + AVI+TTPQ++A DV K + K+K+P
Sbjct: 164 DVDYLIVDTPPGTSDEHLSVVQYLAAAHIDGAVILTTPQEVALQDVRKEISFCHKVKLPI 223
Query: 342 IAVVENMCHFDA----DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 394
I VVENM F + +P G + Q IP L +P+ P + S D G
Sbjct: 224 IGVVENMSGFICPKCKKESQIFPPTTGGAEAMCQDLRIPLLGKVPLDPHIGKSCDKG 280
>sp|Q5I050|NUP1B_XENLA Cytosolic Fe-S cluster assembly factor nubp1-B OS=Xenopus laevis
GN=nubp1-b PE=2 SV=1
Length = 315
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 128/237 (54%), Gaps = 10/237 (4%)
Query: 168 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMV 226
E++ E + + + + V S KGGVGKST + +LA+ LA G V + D D+ GPS+P M+
Sbjct: 48 EEIKEKMSLVKHKILVLSGKGGVGKSTFSAHLAHGLAQDEGKEVALLDVDICGPSIPRMM 107
Query: 227 SPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 284
E + + + + E L V V F S A++ RGP +G+I Q L +WG
Sbjct: 108 GLEGEQVHQSGSGWSPVYVEDNLAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 167
Query: 285 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 341
E+DYL++D PPGT D L++ Q + + AVIVTTPQ+++ DV K + K+K+P
Sbjct: 168 EVDYLIVDTPPGTSDEHLSVVQYLSAAGIDGAVIVTTPQEVSLQDVRKEINFCRKVKLPI 227
Query: 342 IAVVENMCHFDA----DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 394
I VVENM F + + +P G ++ + L +P+ P + S D+G
Sbjct: 228 IGVVENMSGFICPKCENESQIFPPTTGGAEKMCTDLNVSLLGKVPLDPNIGKSCDTG 284
>sp|B0XDJ0|NUBP2_CULQU Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Culex
quinquefasciatus GN=CPIJ017390 PE=3 SV=1
Length = 257
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 126/240 (52%), Gaps = 13/240 (5%)
Query: 174 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 233
L KI +I+ V S KGGVGKSTV+ LA TLA G +VG+ D D+ GPS+P ++ E
Sbjct: 2 LDKIKHIILVLSGKGGVGKSTVSTQLALTLAESGHKVGLLDIDLCGPSVPFLLGLEGH-- 59
Query: 234 EMNPEKRTIIPT-----EYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELD 287
+++ ++ +P + L V + F + A++ RGP + +I Q L W ELD
Sbjct: 60 DVHQCEQGWVPVFSGADQRLAVMSIGFLLKNRDEAVIWRGPKKTAMIKQFLEDVAWDELD 119
Query: 288 YLVIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAV 344
YLVID PPGT D +T+ + V A+IVTTPQ++A DV K V K + + +
Sbjct: 120 YLVIDTPPGTSDEHITVMECLKGVNADGAIIVTTPQEMALEDVRKEVTFCKKTGIAILGI 179
Query: 345 VENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADP 402
VENM F + F G G + + +PHL LPI P + A +G V P
Sbjct: 180 VENMSGFVCPNCAECTKIFSSGGGVALAELAQVPHLGTLPIDPRVGALAGTGKACVTELP 239
>sp|Q29DB7|NUBP2_DROPS Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA18483 PE=3 SV=2
Length = 258
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 126/245 (51%), Gaps = 12/245 (4%)
Query: 174 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 233
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E +
Sbjct: 2 LDKVKNVIIVLSGKGGVGKSTVSTQLALALRHSGHKVGLLDIDLCGPSVPFLLGLEGSNI 61
Query: 234 EMNPEKRTIIPTE-YLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 289
E I T+ + ++S GF + R I RGP + +I Q LT +W ELDYL
Sbjct: 62 YQCDEGWVPIYTDASKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIRQFLTDVKWEELDYL 121
Query: 290 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 346
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECMREVPCNGAIIVTTPQSVALDDVRKEITFCKKTGIKLLGIVE 181
Query: 347 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRP---TLSASGDSGMPEVAAD 401
NM F F G ++ IPHL LPI P L+ S S + E+
Sbjct: 182 NMSGFVCPNCTNCTNIFSSNGGVELAHLVQIPHLGTLPIDPRVGVLAGSTASVLDELPDS 241
Query: 402 PCGEV 406
P +V
Sbjct: 242 PTAQV 246
>sp|Q3KQF0|NUP1A_XENLA Cytosolic Fe-S cluster assembly factor nubp1-A OS=Xenopus laevis
GN=nubp1-a PE=2 SV=1
Length = 315
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 12/275 (4%)
Query: 130 CPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGG 189
CP D E + P + +A P I E++ E + + + + V S KGG
Sbjct: 12 CPGTDSTEAGKSSACQGCPNQSICASGAAAGPDPAI--EEIKEKMSLVKHKILVLSGKGG 69
Query: 190 VGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-Y 247
VGKST + +LA+ LA G V + D D+ GPS+P M+ E + + + + E
Sbjct: 70 VGKSTFSAHLAHGLAQDEGKEVALLDVDICGPSIPKMMGLEGEQVHQSGSGWSPVYVEDN 129
Query: 248 LGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 306
L V V F S A++ RGP +G+I Q L +WG++DYL++D PPGT D L++ Q
Sbjct: 130 LAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGDVDYLIVDTPPGTSDEHLSVVQ 189
Query: 307 VVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDA----DGKRYY 359
+ + AVI+TTPQ+++ DV K + K+K+P I VVENM F + + +
Sbjct: 190 YLSAAGIDGAVIITTPQEVSLQDVRKEINFCRKVKLPIIGVVENMSGFICPKCKNESQIF 249
Query: 360 PFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 394
P G ++ + L +P+ P + S D+G
Sbjct: 250 PPTTGGAEKMCTDLSVSLLGKVPLDPNIGKSCDTG 284
>sp|B3M9R3|NUBP2_DROAN Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
ananassae GN=GF10354 PE=3 SV=1
Length = 261
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 118/221 (53%), Gaps = 9/221 (4%)
Query: 174 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPE-NRL 232
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E + +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRQTGHKVGLLDIDLCGPSVPYLLGLEGSDI 61
Query: 233 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 289
+ + I E + ++S GF + R I RGP + +I Q LT +W ELDYL
Sbjct: 62 FQCDEGWVPIYTDESQTLAVMSIGFLLKNRTDPVIWRGPKKTMMIRQFLTDVKWDELDYL 121
Query: 290 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 346
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLREVPCNGAIIVTTPQGVALDDVRKEITFCKKTGIKLLGIVE 181
Query: 347 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRP 385
NM F F G ++ + IPHL LPI P
Sbjct: 182 NMSGFVCPHCTSCTNIFSSNGGVELAKYAQIPHLGTLPIDP 222
>sp|B4KY56|NUBP2_DROMO Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
mojavensis GN=GI13405 PE=3 SV=1
Length = 264
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 133/252 (52%), Gaps = 18/252 (7%)
Query: 174 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-L 232
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E R +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPHLLGLEGRDI 61
Query: 233 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYL 289
+ + I E + ++S GF + R I RGP + +I Q LT +W +LDYL
Sbjct: 62 YQCDDGWVPIYTDESKTLAVMSIGFLLKNRNDPVIWRGPKKTMMIKQFLTDVKWEDLDYL 121
Query: 290 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 346
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECMREVPCNGAIIVTTPQGVALDDVRKELTFCKKTGIKVLGIVE 181
Query: 347 NM----CHFDADGKRYY-PFGRGSGSQVVQQFGIPHLFDLPIRP---TLSASGDSGMPEV 398
NM C +D + FG G+++ Q +P L LPI P L+ S S + E+
Sbjct: 182 NMSGFVCPHCSDCTNIFSSFG---GAELAQLAQVPLLGTLPIDPRVGVLAGSTASVLNEL 238
Query: 399 AADPCGEVANTF 410
A +V +
Sbjct: 239 ADSSTAQVLRSI 250
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,613,838
Number of Sequences: 539616
Number of extensions: 8702970
Number of successful extensions: 22142
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 21528
Number of HSP's gapped (non-prelim): 268
length of query: 532
length of database: 191,569,459
effective HSP length: 122
effective length of query: 410
effective length of database: 125,736,307
effective search space: 51551885870
effective search space used: 51551885870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)