Query 009575
Match_columns 532
No_of_seqs 155 out of 1734
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 14:46:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009575.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009575hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03167 Chaperonin-60 beta su 100.0 3E-108 6E-113 906.2 51.0 525 1-532 1-525 (600)
2 PRK12849 groEL chaperonin GroE 100.0 1E-101 3E-106 846.9 53.4 466 63-532 2-468 (542)
3 PRK12852 groEL chaperonin GroE 100.0 1E-101 3E-106 848.9 52.6 466 63-532 3-469 (545)
4 PRK00013 groEL chaperonin GroE 100.0 4E-101 8E-106 843.3 52.2 466 63-532 2-468 (542)
5 TIGR02348 GroEL chaperonin Gro 100.0 5E-101 1E-105 840.8 52.4 465 64-532 2-467 (524)
6 PRK12850 groEL chaperonin GroE 100.0 5E-101 1E-105 843.2 51.9 467 62-532 2-469 (544)
7 PTZ00114 Heat shock protein 60 100.0 7E-101 2E-105 844.5 52.3 467 63-532 14-484 (555)
8 CHL00093 groEL chaperonin GroE 100.0 9E-101 2E-105 839.8 51.2 466 63-532 2-470 (529)
9 cd03344 GroEL GroEL_like type 100.0 3E-100 7E-105 833.7 53.1 465 64-532 1-466 (520)
10 KOG0356 Mitochondrial chaperon 100.0 2E-101 3E-106 806.9 39.0 473 55-532 10-484 (550)
11 PRK14104 chaperonin GroEL; Pro 100.0 4E-100 8E-105 836.3 51.7 466 63-532 3-469 (546)
12 PRK12851 groEL chaperonin GroE 100.0 4E-100 9E-105 835.5 51.9 466 63-532 3-469 (541)
13 TIGR02339 thermosome_arch ther 100.0 1.1E-80 2.4E-85 681.7 43.0 402 65-532 10-461 (519)
14 cd03343 cpn60 cpn60 chaperonin 100.0 1.3E-80 2.8E-85 681.2 43.1 402 65-532 9-458 (517)
15 COG0459 GroL Chaperonin GroEL 100.0 2.3E-82 5E-87 688.4 27.6 440 63-532 3-456 (524)
16 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 7.1E-81 1.5E-85 677.2 38.3 392 72-532 11-424 (484)
17 cd03335 TCP1_alpha TCP-1 (CTT 100.0 5.3E-80 1.1E-84 677.3 43.0 402 72-532 7-459 (527)
18 TIGR02347 chap_CCT_zeta T-comp 100.0 1.3E-79 2.8E-84 673.2 44.1 397 72-532 15-467 (531)
19 TIGR02340 chap_CCT_alpha T-com 100.0 6.1E-80 1.3E-84 677.8 41.4 402 72-532 11-463 (536)
20 cd03338 TCP1_delta TCP-1 (CTT 100.0 1.3E-79 2.9E-84 672.8 41.9 404 72-532 7-457 (515)
21 cd03339 TCP1_epsilon TCP-1 (CT 100.0 2.5E-79 5.3E-84 671.9 42.8 402 65-532 17-468 (526)
22 cd03340 TCP1_eta TCP-1 (CTT or 100.0 1.5E-78 3.2E-83 665.3 43.9 400 72-532 15-460 (522)
23 TIGR02343 chap_CCT_epsi T-comp 100.0 1.4E-78 3E-83 665.9 43.0 397 72-532 26-472 (532)
24 TIGR02344 chap_CCT_gamma T-com 100.0 1.6E-78 3.5E-83 665.5 42.2 397 72-532 15-462 (525)
25 TIGR02342 chap_CCT_delta T-com 100.0 3.2E-78 6.9E-83 661.6 42.4 404 72-532 8-458 (517)
26 TIGR02345 chap_CCT_eta T-compl 100.0 2.6E-78 5.7E-83 662.9 41.0 398 72-532 17-461 (522)
27 cd03336 TCP1_beta TCP-1 (CTT o 100.0 1.6E-77 3.5E-82 656.0 44.5 396 72-532 12-455 (517)
28 PTZ00212 T-complex protein 1 s 100.0 2.4E-77 5.2E-82 656.6 43.8 396 72-532 21-467 (533)
29 TIGR02346 chap_CCT_theta T-com 100.0 1.8E-77 3.9E-82 657.0 38.6 396 72-532 17-459 (531)
30 cd03337 TCP1_gamma TCP-1 (CTT 100.0 2.3E-77 5E-82 649.4 39.0 380 72-532 15-421 (480)
31 cd00309 chaperonin_type_I_II c 100.0 3.8E-76 8.2E-81 638.2 42.4 385 65-532 2-407 (464)
32 cd03341 TCP1_theta TCP-1 (CTT 100.0 3.3E-76 7.2E-81 639.1 40.2 383 71-532 6-411 (472)
33 TIGR02341 chap_CCT_beta T-comp 100.0 1.3E-75 2.8E-80 640.7 44.9 396 72-532 13-456 (519)
34 KOG0361 Chaperonin complex com 100.0 1.1E-73 2.4E-78 573.1 28.8 400 72-532 19-464 (543)
35 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 5.8E-70 1.3E-74 591.5 37.8 383 85-532 1-426 (485)
36 KOG0363 Chaperonin complex com 100.0 1.2E-67 2.6E-72 526.6 29.2 396 72-532 17-460 (527)
37 KOG0358 Chaperonin complex com 100.0 8.7E-68 1.9E-72 529.8 26.3 403 72-532 25-475 (534)
38 KOG0362 Chaperonin complex com 100.0 1.8E-62 3.8E-67 506.5 34.7 398 70-532 23-462 (537)
39 KOG0360 Chaperonin complex com 100.0 1.9E-61 4E-66 495.9 26.0 401 72-532 18-469 (545)
40 KOG0364 Chaperonin complex com 100.0 2.1E-58 4.6E-63 469.5 19.9 390 77-530 23-460 (527)
41 KOG0359 Chaperonin complex com 100.0 1.3E-54 2.8E-59 441.3 18.9 395 73-531 17-457 (520)
42 KOG0357 Chaperonin complex com 100.0 5.2E-52 1.1E-56 411.5 17.3 316 58-532 15-336 (400)
43 cd03333 chaperonin_like chaper 100.0 1.8E-28 3.9E-33 238.8 21.0 191 204-470 3-209 (209)
44 cd03334 Fab1_TCP TCP-1 like do 99.9 3.3E-26 7.1E-31 230.4 21.1 199 215-471 19-254 (261)
45 KOG0230 Phosphatidylinositol-4 99.3 5.2E-11 1.1E-15 138.0 14.4 208 215-481 333-578 (1598)
46 COG0459 GroL Chaperonin GroEL 97.3 0.00037 8.1E-09 77.1 6.9 88 294-397 259-353 (524)
47 TIGR02345 chap_CCT_eta T-compl 58.5 3.1 6.7E-05 46.4 -0.2 62 304-366 246-316 (522)
48 smart00574 POX domain associat 42.7 1.8E+02 0.0039 26.8 8.6 59 420-491 69-128 (140)
49 COG1433 Uncharacterized conser 41.6 1.1E+02 0.0024 27.5 7.0 42 296-345 56-97 (121)
50 PF14681 UPRTase: Uracil phosp 32.8 3.1E+02 0.0068 26.6 9.4 75 273-347 116-202 (207)
51 PRK13600 putative ribosomal pr 28.8 2.4E+02 0.0053 23.6 6.7 54 296-360 20-74 (84)
52 PF01113 DapB_N: Dihydrodipico 24.6 1.9E+02 0.0042 25.4 5.8 42 282-325 70-111 (124)
53 PF07526 POX: Associated with 21.5 2.8E+02 0.0062 25.4 6.3 44 448-491 84-128 (140)
54 TIGR01166 cbiO cobalt transpor 21.1 89 0.0019 29.3 3.1 41 276-316 143-188 (190)
No 1
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=2.7e-108 Score=906.19 Aligned_cols=525 Identities=91% Similarity=1.231 Sum_probs=498.1
Q ss_pred CcccccccccccccccCCCcccchhcccccccccccccccccccccccccccccccccccccccccccCCcHHHHHHHHH
Q 009575 1 MASTFTAMSSISSMIAPNGRMTDKKLASSSNKLSSLASISSSSFGRRQSVALRRARTPKIYAAKDLHFNKDGYAMKKLQN 80 (532)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~f~~~~~~~~~~~~ 80 (532)
|||++.+.++.++..++... ++.+.++|...++..+|+++++.+.|++..++..++|+|.||.+.++|+.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ar~~l~~ 73 (600)
T PLN03167 1 MASTFTATSSVGSLAAPNGH-------KSDNRLSSFASISSSSFGRRQSVRLRRSRSPKVKAAKELHFNKDGSAIKKLQA 73 (600)
T ss_pred CcchhhhhhhhcCccccccc-------ccccccccccccccccccccccccccccCCchhhhcceeecCCcHHHHHHHHH
Confidence 88998888888888877544 45577788888888999766665556666665555899999932279999999
Q ss_pred HHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCcccchHHHHHHH
Q 009575 81 GVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG 160 (532)
Q Consensus 81 gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGTTt~vvLa~~ 160 (532)
|++.|+++|++||||+||||||++++|+|+|||||+||+|+|+++||++|+||+|++++|++||+++||||||++||+++
T Consensus 74 g~~~la~~vktTLGP~G~~kmi~~~~G~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~evGDGTTTvvVLa~~ 153 (600)
T PLN03167 74 GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG 153 (600)
T ss_pred HHHHHHHHHhccCCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCchhhHHHHHHHHHHHhhhhhhCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCchhHHHHHhhhcCChhhHhHHHHHHHHhhccCCceEEec
Q 009575 161 LIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE 240 (532)
Q Consensus 161 Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~~l~~va~ts~~~~~~is~li~eA~~~vg~~g~I~v~~ 240 (532)
||+++.+++++|+||..|++||++|.+.+++.|+++++|+++.+|.++|++|+++++.|++|++||+.+++++|.|.+++
T Consensus 154 LL~ea~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~s~~v~d~~L~~vA~tS~~~~~~i~~liaeAv~~Vg~~g~i~v~~ 233 (600)
T PLN03167 154 LIAEGVKVVAAGANPVQITRGIEKTAKALVKELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE 233 (600)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHhccCcHHHHHHHHHHHHHhccCCcEEecc
Confidence 99999999999999999999999999999999999999997658999999999999999999999999999999999999
Q ss_pred CCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHHHhcCCCeEEEcccccHHHH
Q 009575 241 GKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEAL 320 (532)
Q Consensus 241 G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i~~~g~~lvIia~~I~~~al 320 (532)
|++++|++++++|++|+++|.+|||++++++|+++++||+||++|++|++++++.++++.+.+.|+|+||++++|+++++
T Consensus 234 g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~~l~np~Ill~d~~i~~~~~l~~~le~i~~~g~~lvI~a~~I~~~aL 313 (600)
T PLN03167 234 GKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKITNARDLIGILEDAIRGGYPLLIIAEDIEQEAL 313 (600)
T ss_pred CCCccceeEEEEEEEecCCccCcccccCcCCCeEEEeCCEEEEEccccCCHHHHHHHHHHHHHhCcCEEEEcCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEeCceEEEEcCCCCh
Q 009575 321 ATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQ 400 (532)
Q Consensus 321 ~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~i~g~~~~ 400 (532)
++|+.|+++|.++|+|||+|+||+.++++|+|||++|||++++++.|++++++++++||+|++|++.++.|+++++.+++
T Consensus 314 ~~L~~nkl~g~~~i~aVk~p~~g~~~~~~L~dia~~tGa~~i~~~~~~~l~~~~~~~LG~a~~v~~~~~~t~iig~~~~~ 393 (600)
T PLN03167 314 ATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKVGKEVLGTAAKVVLTKDTTTIVGDGSTQ 393 (600)
T ss_pred HHHHHhhccccceEEEEEcccCCcchHHHHHHHHHhhCCEEecccccCCcccCCHHHCceeeEEEEecccceeeCCCccH
Confidence 99999999999999999999999999999999999999999999888889999999999999999999999999998999
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcCccccCchhh
Q 009575 401 DAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL 480 (532)
Q Consensus 401 ~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~gvVpGGGa~e 480 (532)
+.+++|+.+++.+++++.++|++++|++|+++|++++++|+|||+|+.+++|+||+++||+|++|+|+++|+|||||++|
T Consensus 394 ~~i~~r~~~i~~~~~~~~~~~~~~~l~~Ri~~l~g~~aiI~vgG~t~~~l~E~er~i~DAl~avk~ai~~gvVpGGGa~e 473 (600)
T PLN03167 394 EAVNKRVAQIKNLIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL 473 (600)
T ss_pred HHHHHHHHHHHhhhhccCCHHHHHHHHHHHhhcCCcEEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 481 LRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 481 l~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|+++.+|++++..+++.+|+.++++|++||+.||++||+|||+|+.+++.+|
T Consensus 474 l~ls~~L~~~~~~~~~~eq~~g~~~~~~Al~~p~r~La~NAG~d~~~vv~~L 525 (600)
T PLN03167 474 LRLASKVDAIKDTLENDEQKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKV 525 (600)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHhcchhhhhhcCCCCHHHHHHHH
Confidence 9999999999888889999889999999999999999999999999999874
No 2
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.4e-101 Score=846.90 Aligned_cols=466 Identities=59% Similarity=0.901 Sum_probs=453.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+|.|+|| +++++.+++|+..++++|++||||+||||||+++.|+++|||||+||+++|+++||.+|+||+|++++|++
T Consensus 2 ~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDGaTIlk~i~~~hp~~~~~a~ll~~~a~~ 79 (542)
T PRK12849 2 AKIIKFD--EEARRALERGVNKLADAVKVTLGPKGRNVVIDKSFGAPTITKDGVSIAKEIELEDPFENLGAQLVKEVASK 79 (542)
T ss_pred Cccccch--HHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCccHhHHHHHHHHHHHh
Confidence 6899999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhH
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~ 221 (532)
||+++||||||+++|+++||+++.+++++|+||..|++||++|++.+++.|+++++|+++. +|.++|+||+++++++++
T Consensus 80 qd~e~GDGTTtvviLageLL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~ 159 (542)
T PRK12849 80 TNDVAGDGTTTATVLAQALVQEGLKNVAAGANPMDLKRGIDKAVEAVVEELKALARPVSGSEEIAQVATISANGDEEIGE 159 (542)
T ss_pred cCCccCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHH
Q 009575 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (532)
Q Consensus 222 li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i 301 (532)
++++|+..++++|.+.+++|++++|++++++|++|+++|.+|+|.++.++|+++++||+|+++|++|++++++.++++++
T Consensus 160 lv~~Av~~v~~~g~i~i~~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~~~~~l~~i 239 (542)
T PRK12849 160 LIAEAMEKVGKDGVITVEESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEAVLEDPLILLTDKKISSLQDLLPLLEKV 239 (542)
T ss_pred HHHHHHHHhccCCcEeEEeCCCcceeEEEEEeEEEecCcccCcccccccCceEEeeCcEEEeecCCcCCHHHHHHHHHHH
Confidence 99999999999898889999999987699999999999999999999889999999999999999999999999999999
Q ss_pred HhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCcee
Q 009575 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (532)
Q Consensus 302 ~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~ 381 (532)
.+.|+||||++++|+++|+++|+.|+++|.++|+|||.|+|+++++++|+|||.+|||++++++.+.+++++++++||+|
T Consensus 240 ~~~~~~lvI~~~~I~~~al~~l~~~~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tGa~~v~~~~~~~~~~~~~~~LG~~ 319 (542)
T PRK12849 240 AQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGLKLEEVTLDDLGRA 319 (542)
T ss_pred HHhCCCEEEECCCCcHHHHHHHHHhhhhccccEEEEeCCCccchhHhHHHHHHHHhCCEEecccccCCcccCCHHHCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred eEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Q 009575 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (532)
Q Consensus 382 ~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl 461 (532)
+.|++++++++++.++++++.+..|++++++++++++++|++++|+||+++|+++++||+|||+|+.+++|++|+++||+
T Consensus 320 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~er~i~DAl 399 (542)
T PRK12849 320 KRVTITKDNTTIVDGAGDKEAIEARVAQIRRQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVELKERKDRVEDAL 399 (542)
T ss_pred eEEEEeeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++++++++|+|||||++|++++.+|.+++ +.++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 400 ~~~~~a~~~g~VpGGGa~e~~ls~~L~~~~-~~~g~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~vi~~L 468 (542)
T PRK12849 400 NATRAAVEEGIVPGGGVALLRAAKALDELA-GLNGDQA-AGVEIVRRALEAPLRQIAENAGLDGSVVVAKV 468 (542)
T ss_pred HHHHHHHHcCeecCCCHHHHHHHHHHHHhh-CCChHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 999999999999999999999999999988 7777776 89999999999999999999999999998764
No 3
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.5e-101 Score=848.85 Aligned_cols=466 Identities=55% Similarity=0.861 Sum_probs=451.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+|+|.|| +++|+.+++|++.|+++|++||||+||||||+++.|+++|||||+|||++|+++||++|+||+|++++|++
T Consensus 3 ~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~iTnDG~TIlk~i~~~~~~~~p~akll~e~a~~ 80 (545)
T PRK12852 3 AKDVKFS--GDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASK 80 (545)
T ss_pred cchhhcc--HHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCcccChHHHHHHHHHhh
Confidence 7999999 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhH
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~ 221 (532)
||+++||||||+++||++||+++.+++++|+||..|++||++|++.+++.|+++++|+++. ++.+||++|+++++.+++
T Consensus 81 q~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~ 160 (545)
T PRK12852 81 TNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVKDIEKRAKPVASSAEIAQVGTISANGDAAIGK 160 (545)
T ss_pred cCceecCCcchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHhhhcCChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHH
Q 009575 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (532)
Q Consensus 222 li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i 301 (532)
|+++|+.+++++|.|.++.|++..+.+++++|++|+++|.+|||++++++|+++++||+|+++|++|+++++++++|+.+
T Consensus 161 li~eA~~~vg~~g~i~v~~g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~~l~n~~Ili~d~~i~~~~~i~~~l~~i 240 (545)
T PRK12852 161 MIAQAMQKVGNEGVITVEENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTVELDDAYILLHEKKLSGLQAMLPVLEAV 240 (545)
T ss_pred HHHHHHHHhccCCceeeecCCCcceEEEEEEeEEecCCccCCccccccccceEEecCceEEEecCccCCHHHHHHHHHHH
Confidence 99999999999999999999988555599999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCcee
Q 009575 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (532)
Q Consensus 302 ~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~ 381 (532)
.+.|+||||++++|+++|+++|+.|+++|.++|+||++|+||+.++++|+|||++|||++++++.|++++++++++||+|
T Consensus 241 ~~~g~~lvI~~~~i~~~al~~l~~nk~~~~~~i~av~~~~~~~~r~~~l~~ia~~tGa~~i~~~~~~~l~~~~~~~lG~~ 320 (545)
T PRK12852 241 VQSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQLISEDLGIKLENVTLKMLGRA 320 (545)
T ss_pred HHhCcCEEEECCCCcHHHHHHHHHhcccccceEEEEecCCcccchHhHHHHHHHhcCCEEEecCcCCCcCCCCHHHCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred eEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Q 009575 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (532)
Q Consensus 382 ~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl 461 (532)
+.|++.++++++++++++++.++.|+++++.+++++.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++||+
T Consensus 321 ~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~R~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl 400 (545)
T PRK12852 321 KKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDAL 400 (545)
T ss_pred cEEEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++++++++|+|||||++|++++++|.+++.. ++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 401 ~a~~~a~~~g~VpGGGa~e~~~s~~L~~~~~~-~~~~q-~~i~~~a~AL~~ip~~La~NaG~d~~~vl~~l 469 (545)
T PRK12852 401 NATRAAVQEGIVPGGGVALLRAKKAVGRINND-NADVQ-AGINIVLKALEAPIRQIAENAGVEGSIVVGKI 469 (545)
T ss_pred HHHHHHHhcCCCcCchHHHHHHHHHHHHhhcC-CcHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 99999999999999999999999999998766 56655 89999999999999999999999999998764
No 4
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=3.9e-101 Score=843.33 Aligned_cols=466 Identities=63% Similarity=0.916 Sum_probs=449.2
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+|+|.|| .+++..+++|+..++++|++||||+||||||+++.|+++|||||+||||+|+++||++|+||+|++++|++
T Consensus 2 ~~~~~~~--~~a~~~~i~a~~~ia~~v~ttLGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~e~a~~ 79 (542)
T PRK00013 2 AKDIKFG--EDARRKLLRGVNKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDPFENMGAQLVKEVASK 79 (542)
T ss_pred Cchhhch--HHHHHHHHHHHHHHHHHhhccCCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCchhhHHHHHHHHHHHh
Confidence 6899999 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhH
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~ 221 (532)
||+++||||||+++|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|+++. +|.++|++|+++++.+++
T Consensus 80 qd~e~GDGTTtvviLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~~~~~~~l~~va~ts~~~~~~ls~ 159 (542)
T PRK00013 80 TNDVAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAAVEELKKISKPVEDKEEIAQVATISANGDEEIGK 159 (542)
T ss_pred cCcccCCccchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHH
Q 009575 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (532)
Q Consensus 222 li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i 301 (532)
++++|+..++++|.|.++.+....+.+++++|++|+++|.+|||.+++++|+++++||+||++|++|++++++.++++++
T Consensus 160 lv~~Av~~v~~~g~i~i~~~~~~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ilv~d~~i~~~~~l~~~l~~i 239 (542)
T PRK00013 160 LIAEAMEKVGKEGVITVEESKGFETELEVVEGMQFDRGYLSPYFVTDPEKMEAELENPYILITDKKISNIQDLLPVLEQV 239 (542)
T ss_pred HHHHHHHHhCcCCcEEEEEcCCCCceEEEEEeEEecCCcccccccccccCCeEEEecCEEEEEcCccCCHHHHHHHHHHH
Confidence 99999999998888888665544444499999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCcee
Q 009575 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (532)
Q Consensus 302 ~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~ 381 (532)
.+.|+||||++++|+++++++|+.|+++|+++|+|||.|+||+.++++|+|||.+||+++++++.|++++++++++||+|
T Consensus 240 ~~~g~~lvi~~~~I~~~al~~l~~~~~~g~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~ 319 (542)
T PRK00013 240 AQSGKPLLIIAEDVEGEALATLVVNKLRGTLKVVAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDATLEDLGQA 319 (542)
T ss_pred HHhCCCEEEECCCCcHHHHHHHHHcCCcccceEEEEecCCcccchhhhHHHHHHHcCCEEecccccCCcccCCHHHCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred eEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Q 009575 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (532)
Q Consensus 382 ~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl 461 (532)
+.|+++++++++|+++++++.+..|+++|+.++++++++|++|+|+||+++|+|+++||+|||+|+.+++|++|+++||+
T Consensus 320 ~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~g~~~tI~irG~t~~~l~E~er~i~Dal 399 (542)
T PRK00013 320 KKVVVTKDNTTIVDGAGDKEAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDAL 399 (542)
T ss_pred eEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++++++++|+|||||++|++++.+|+++ .+.++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 400 ~~vk~al~~g~VpGGGa~e~~~s~~L~~~-~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~vl~~l 468 (542)
T PRK00013 400 HATRAAVEEGIVPGGGVALLRAAPALEAL-KGLNGDEA-TGINIVLRALEAPLRQIAENAGLEGSVVVEKV 468 (542)
T ss_pred HHHHHHHHcCcccCcHHHHHHHHHHHHHh-cCCChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 99999999999999999999999999988 66777766 89999999999999999999999999998764
No 5
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=5.4e-101 Score=840.84 Aligned_cols=465 Identities=62% Similarity=0.910 Sum_probs=451.1
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhcc
Q 009575 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (532)
Q Consensus 64 k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~ 143 (532)
|++.|| ++++..+++|+..++++|++||||+||||||+++.|+++|||||+||+|+|+++||++|+||+|++++|++|
T Consensus 2 ~~~~~~--~~a~~~~~~~~~~la~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~akll~~~a~~q 79 (524)
T TIGR02348 2 KQIKFD--EEARKALLRGVDKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDKFENMGAQLVKEVASKT 79 (524)
T ss_pred cccccc--HHHHHHHHHHHHHHHHHhccCcCCCCCcEEEECCCCCeeEeccHHHHHHHccCCChhhHHHHHHHHHHHHcc
Confidence 789999 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhHH
Q 009575 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNM 222 (532)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~l 222 (532)
|+++||||||+++|+++||+++.+++++|+||..|++||++|.+.++++|+++++|+++. ++.++|++|++++++++++
T Consensus 80 d~e~GDGTTtvviLa~~Ll~~a~~li~~GihP~~Ii~G~~~A~~~~l~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~l 159 (524)
T TIGR02348 80 NDVAGDGTTTATVLAQAIVKEGLKNVAAGANPIELKRGIEKAVEAAVEELKKLSKPVKGKKEIAQVATISANNDEEIGSL 159 (524)
T ss_pred CceeCCCcchHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876 8999999999999999999
Q ss_pred HHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHHH
Q 009575 223 IAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAI 302 (532)
Q Consensus 223 i~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i~ 302 (532)
+++|+..++++|.|.++.|+..+|.+++++|++|+++|.+|+|.+++++++++++||+||++|++|++++++.++++.+.
T Consensus 160 v~~A~~~v~~~~~i~v~~g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~i~~~l~~i~ 239 (524)
T TIGR02348 160 IAEAMEKVGKDGVITVEESKSLETELEVVEGMQFDRGYISPYFVTDAEKMEVELENPYILITDKKISNIKDLLPLLEKVA 239 (524)
T ss_pred HHHHHHHhCcCCcEeeecCCCccccEEEEEeEEEcCCCCCcccccCccCCeEEeeCceeeeccCCcCCHHHHHHHHHHHH
Confidence 99999999999989998899887766999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceee
Q 009575 303 RGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNAS 382 (532)
Q Consensus 303 ~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~ 382 (532)
+.|+||||++++|+++|+++|+.|+++|+++|+|||+|+||+.++++|+|||++|||++++++.|++++++++++||+|+
T Consensus 240 ~~g~~lvi~~~~i~~~al~~l~~n~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~ 319 (524)
T TIGR02348 240 QSGKPLLIIAEDVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLEDIAILTGGQVISEELGLKLEEVTLDDLGKAK 319 (524)
T ss_pred HhCcCEEEECCCCChHHHHHHHHhhcccccceEEEECCCccchhhhhHHHHHHHhCCEEecccccCCcCcCCHHHCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred EEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Q 009575 383 KVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALN 462 (532)
Q Consensus 383 ~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~ 462 (532)
.|++.++++++++++++++.+..|+++++.++++++++|++++|+||+++|+|+++||+|||+|+.+++|++|+++||+|
T Consensus 320 ~v~~~~~~~~~i~~~~~~~~~~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~Dal~ 399 (524)
T TIGR02348 320 KVTVDKDNTTIVEGAGDKAAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKKLRVEDALN 399 (524)
T ss_pred EEEEeecEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 463 ATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 463 a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++|+++++|||||||++||+++.+|++ ..+.++.+| +++++|++||+.||++||+|||+|+.+++++|
T Consensus 400 ~~r~a~~~g~VpGGGa~e~~~s~~L~~-~~~~~~~~~-~~~~~~a~AL~~ip~~La~NaG~d~~~v~~~l 467 (524)
T TIGR02348 400 ATRAAVEEGIVPGGGVALLRAAAALEG-LKGDNEDEA-IGIDIVKRALEAPLRQIAENAGKDGAVVAEKV 467 (524)
T ss_pred HHHHHHhcCCccCCcHHHHHHHHHHHH-hccCChHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 999999999999999999999999998 666677666 89999999999999999999999999998764
No 6
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=5.2e-101 Score=843.25 Aligned_cols=467 Identities=57% Similarity=0.872 Sum_probs=450.8
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009575 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (532)
Q Consensus 62 ~~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~ 141 (532)
++|+|+|+ +++++.+++|++.|+++|++||||+||||||+++.|+++|||||+|||++|+++||++|+||+|++++|+
T Consensus 2 ~~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~G~~~ITnDG~tIlk~i~i~hp~~~~ga~ll~~~a~ 79 (544)
T PRK12850 2 AAKEIRFS--TDARDRLLRGVNILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVKEVAS 79 (544)
T ss_pred Ccceeccc--HHHHHHHHHHHHHHHHHHhCCcCCCCCCEEEECCCCCeeEeccHHHHHHHhcCCChhhhHHHHHHHHHHh
Confidence 37999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHh
Q 009575 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (532)
Q Consensus 142 ~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is 220 (532)
+||+++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|+++. +|.++|++|+++++.++
T Consensus 80 ~qd~e~GDGTTt~viLa~~LL~~a~~li~~GihP~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~ 159 (544)
T PRK12850 80 KTNDLAGDGTTTATVLAQAIVREGAKLVAAGMNPMDLKRGIDLAVAAVVDELKKIAKKVTSSKEIAQVATISANGDESIG 159 (544)
T ss_pred hhcchhcCCcchHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999999999999
Q ss_pred HHHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHH
Q 009575 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (532)
Q Consensus 221 ~li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~ 300 (532)
++++||+..++++|.|.++.+....+++++++|++|+++|.+|+|+++.++++.+++||+||++|++|++.+++.+++++
T Consensus 160 ~lv~eAv~~vg~~g~i~v~~~~~~g~~~~~v~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~l~~ 239 (544)
T PRK12850 160 EMIAEAMDKVGKEGVITVEEAKTLGTELDVVEGMQFDRGYLSPYFVTNPEKMRAELEDPYILLHEKKISNLQDLLPILEA 239 (544)
T ss_pred HHHHHHHHHhcccCceeeEEccccCcceEEEEeEEecCccCcCccccccccCeEEEeCCEEEEEecccCCHHHHHHHHHH
Confidence 99999999999988888877666666679999999999999999999988999999999999999999999999999999
Q ss_pred HHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCce
Q 009575 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (532)
Q Consensus 301 i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~ 380 (532)
+.+.|+||||++++|+++++++|+.|+++|.++++|||+|+||+.++++|+|||++|||++++++.|++++++++++||+
T Consensus 240 i~~~g~~lvI~~~~I~d~al~~l~~n~i~~~~~~~avk~p~~g~~~~~~le~ia~~tG~~~i~~~~~~~~~~~~~~~LG~ 319 (544)
T PRK12850 240 VVQSGRPLLIIAEDVEGEALATLVVNKLRGGLKSVAVKAPGFGDRRKAMLEDIAVLTGGQVISEDLGIKLENVTLDMLGR 319 (544)
T ss_pred HHHhCCCEEEECCCCChHHHHHHHHcCCcccceEEEEeCCCcCcccHHHHHHHHHHhCCEEeccccCCCcccCCHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988888899999999999
Q ss_pred eeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009575 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (532)
Q Consensus 381 ~~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DA 460 (532)
|++|++.++++++++++++++.+..|+++++++++++.+.|++++|+||++||+|+++||+|||+|+.+++|++|+++||
T Consensus 320 ~~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~DA 399 (544)
T PRK12850 320 AKRVLITKENTTIIDGAGDKKNIEARVKQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDA 399 (544)
T ss_pred CcEEEEEeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhcCCeEEEEECCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 461 l~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++++++++++|||||||++|++++..|+++ ...++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 400 l~~~k~a~~~g~VpGGGa~e~~~s~~L~~~-~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l 469 (544)
T PRK12850 400 LHATRAAVEEGIVPGGGVALLRARSALRGL-KGANADET-AGIDIVRRALEEPLRQIATNAGFEGSVVVGKV 469 (544)
T ss_pred HHHHHHHHhcCCccCCcHHHHHHHHHHHhc-cCCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 999999999999999999999999999988 56666666 89999999999999999999999999998764
No 7
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=7.3e-101 Score=844.45 Aligned_cols=467 Identities=53% Similarity=0.848 Sum_probs=452.1
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
++++.|+ ++++..+++|+..|+++|++||||+||||||++++|+|+|||||+||+|+|+++||.+|+||+|++++|++
T Consensus 14 ~~~~~~~--~~a~~~~i~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDG~TIlk~i~~~~p~~~~~a~ll~~~a~~ 91 (555)
T PTZ00114 14 GKEIRFG--DEARQSLLKGIERLADAVAVTLGPKGRNVIIEQEYGSPKITKDGVTVAKAIEFSDRFENVGAQLIRQVASK 91 (555)
T ss_pred hhhhhhH--HHHHHHHHHHHHHHHHHHhccCCCCCCcEEEECCCCCeEEeeChHHHHHhcCcCCcchhHHHHHHHHHHHh
Confidence 6788898 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhH
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~ 221 (532)
||+++||||||+||||++||+++.+++++|+||..|++||++|.+.+++.|+++++|+++. +|.++|+||+++++.+++
T Consensus 92 qd~evGDGTTtvvvLa~~LL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~ 171 (555)
T PTZ00114 92 TNDKAGDGTTTATILARAIFREGCKAVAAGLNPMDLKRGIDLAVKVVLESLKEQSRPVKTKEDILNVATISANGDVEIGS 171 (555)
T ss_pred hccccCCcccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHcCChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999866 899999999999999999
Q ss_pred HHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHH
Q 009575 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (532)
Q Consensus 222 li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i 301 (532)
+++||+.+++++|.|.+++|++++|++++++|++|+++|.+|+|++++++|+++++||+||++|++|++++++.++++++
T Consensus 172 li~eAv~~vg~~g~I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~L~~~~~i~~~le~i 251 (555)
T PTZ00114 172 LIADAMDKVGKDGTITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKVELENPLILVTDKKISSIQSILPILEHA 251 (555)
T ss_pred HHHHHHHHhCcCCcEEEcCCCCccceEEEEEEEEEeccccccccccccccCeEEecCCEEEEEcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecC-CCccccCCCCCCCce
Q 009575 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDE-VGLALDKVGKEVLGN 380 (532)
Q Consensus 302 ~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~-~~~~l~~~~~~~lG~ 380 (532)
.+.|+||||++++|+++|+++|..|+++|.++|+|||.|++|++++++|+|||++|||+++++. .+..++++++++||+
T Consensus 252 ~~~~~~llI~~~~i~~~al~~L~~n~~~g~~~i~avk~~~~g~~~~~~l~~la~~tG~~~i~~~~~~~~l~~~~~~~LG~ 331 (555)
T PTZ00114 252 VKNKRPLLIIAEDVEGEALQTLIINKLRGGLKVCAVKAPGFGDNRKDILQDIAVLTGATVVSEDNVGLKLDDFDPSMLGS 331 (555)
T ss_pred HHhCCCEEEECCCCcHHHHHHHHHhCCCCceEEEEEecCCCCcchHHHHHHHHHHhCCEEecccccccCcccCCHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999986 777788999999999
Q ss_pred eeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009575 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (532)
Q Consensus 381 ~~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DA 460 (532)
|++|+++++++++++++++++.|+.|+++++.++++..++|++++|+||+++|+++++||+|||+|+.+++|++|+++||
T Consensus 332 a~~v~~~~~~~~~~~~~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~i~G~t~~~l~E~~r~i~Da 411 (555)
T PTZ00114 332 AKKVTVTKDETVILTGGGDKAEIKERVELLRSQIERTTSEYDKEKLKERLAKLSGGVAVIKVGGASEVEVNEKKDRIEDA 411 (555)
T ss_pred CceEEEEeceEEEEeCCCcHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCccccCchhhhHHHHHHHHHhc--cCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKE--TLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 461 l~a~~~al~~gvVpGGGa~el~ls~~L~~~~~--~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+|++++++++|||||||++|++++.+|++++. ..++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 412 l~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~~~-~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l 484 (555)
T PTZ00114 412 LNATRAAVEEGIVPGGGVALLRASKLLDKLEEDNELTPDQR-TGVKIVRNALRLPTKQIAENAGVEGAVVVEKI 484 (555)
T ss_pred HHHHHHHHhcCcccCCcHHHHHHHHHHHHHhhccCCchHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 99999999999999999999999999998875 4666666 89999999999999999999999999998764
No 8
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=9.3e-101 Score=839.83 Aligned_cols=466 Identities=57% Similarity=0.887 Sum_probs=448.5
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+|+|.|+ +++|+.+++|++.++++|++||||+||||||+++.|+++|||||+||||+|+++||++++|++|++++|.+
T Consensus 2 ~~~~~~~--~~~~~~~~~g~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~a~~g~~li~~~a~~ 79 (529)
T CHL00093 2 SKKILYQ--DNARRALERGMDILAEAVSVTLGPKGRNVVLEKKYGSPQIVNDGVTIAKEIELEDHIENTGVALIRQAASK 79 (529)
T ss_pred CceeecC--HHHHHHHHHHHHHHHHHHhcccCCCCCcEEEECCCCCeeEeccHHHHHHHccCcCHHHHHHHHHHHHHHHh
Confidence 6899999 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhH
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~ 221 (532)
|++++||||||++||+++||+++.+++++|+||..|++||++|.+.+++.|+++++|+++. +|.+||++|+++++.|++
T Consensus 80 ~~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~d~~~L~~VA~ts~~~~~~l~~ 159 (529)
T CHL00093 80 TNDVAGDGTTTATVLAYAIVKQGMKNVAAGANPISLKRGIEKATQYVVSQIAEYARPVEDIQAITQVASISAGNDEEVGS 159 (529)
T ss_pred cCceecCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHhccChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCH-HHHHHHHHH
Q 009575 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA-RDLINVLED 300 (532)
Q Consensus 222 li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~-~el~~~le~ 300 (532)
|++||+.+++++|.|.++.|+..++.+++++|++|+++|.+|||++++++|+++++||+|+++|++|+.. .+++++++.
T Consensus 160 lv~eAv~~vg~~g~i~~~~g~~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~~l~n~~Ili~d~~le~~~~~i~~~l~~ 239 (529)
T CHL00093 160 MIADAIEKVGREGVISLEEGKSTVTELEITEGMRFEKGFISPYFVTDTERMEVVQENPYILLTDKKITLVQQDLLPILEQ 239 (529)
T ss_pred HHHHHHHHhccCCceeecCCCccceeeEEEeeEEecCccCcCccccCCccceEEecCceehhhcCCCCchHHHHHHHHHH
Confidence 9999999999999898877776666679999999999999999999999999999999999999999987 789999999
Q ss_pred HHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCce
Q 009575 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (532)
Q Consensus 301 i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~ 380 (532)
+.+.|.|+||++++|+++++++|+.|+.+|+++|+||+.|++|++++++|+|||++|||++++++.|++++++++++||+
T Consensus 240 i~~~~~~lvi~~~~i~~~al~~l~l~k~~g~~~i~avr~~~~~~~~k~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~ 319 (529)
T CHL00093 240 VTKTKRPLLIIAEDVEKEALATLVLNKLRGIVNVVAVRAPGFGDRRKAMLEDIAILTGGQVITEDAGLSLETIQLDLLGQ 319 (529)
T ss_pred HHhcCCCEEEEcCCCChHHHHHHHHhhhcccceEEEEecCCCCcchHHHHHHHHHhhCCEEecccccCCcCCCCHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred eeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009575 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (532)
Q Consensus 381 ~~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DA 460 (532)
|++|++.+++++++. .++++.+..||++++++++.++++||+++|+||+++|+|+++||+|||+|+.+++|++|+++||
T Consensus 320 ~~~v~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~eR~~~l~g~~~~I~irg~t~~~l~E~er~i~DA 398 (529)
T CHL00093 320 ARRIIVTKDSTTIIA-DGNEEQVKARCEQLRKQIEIADSSYEKEKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDA 398 (529)
T ss_pred ceEEEEecCEEEEEe-cCcHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHhcCCeEEEEeccCcHHHHHHHHHHHHHH
Confidence 999999999999998 5678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCccccCchhhhHHHHHHHHHhc-cCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKE-TLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 461 l~a~~~al~~gvVpGGGa~el~ls~~L~~~~~-~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+|++++++++|+|||||++||++|++|++++. +.++.+| +++++|++||+.||++||+|||+|+.+++.++
T Consensus 399 l~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~g~~~-~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l 470 (529)
T CHL00093 399 INATKAAVEEGIVPGGGATLVHLSENLKTWAKNNLKEDEL-IGALIVARAILAPLKRIAENAGKNGSVIIEKV 470 (529)
T ss_pred HHHHHHHHHcCcccCCcHHHHHHHHHHHHHhccCCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 99999999999999999999999999999876 6777766 89999999999999999999999999998764
No 9
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=3.1e-100 Score=833.66 Aligned_cols=465 Identities=63% Similarity=0.933 Sum_probs=451.8
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhcc
Q 009575 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (532)
Q Consensus 64 k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~ 143 (532)
|+|.|| .+++..+++|+..|+++|++||||+||+|||++++|+++|||||+||+|+|+++||.+|+||+|++++|++|
T Consensus 1 ~~~~~g--~~a~~~~i~~~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~a~ll~~~a~~q 78 (520)
T cd03344 1 KDIKFG--EEARKALLRGVNKLADAVKVTLGPKGRNVVIEKSFGSPKITKDGVTVAKEIELEDPFENMGAQLVKEVASKT 78 (520)
T ss_pred Ccccch--HHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEECCCCCeEEEecHHHHHHHcccCCcchhHHHHHHHHHHhhh
Confidence 578899 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhHH
Q 009575 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNM 222 (532)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~l 222 (532)
|+++||||||+++|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|+++. +|.++|+||++++++++++
T Consensus 79 d~e~GDGTTtvviLa~~Ll~~~~~li~~gi~p~~I~~G~~~a~~~~~~~L~~~~~~i~~~~~l~~va~ts~~~~~~l~~l 158 (520)
T cd03344 79 NDVAGDGTTTATVLARAIIKEGLKAVAAGANPMDLKRGIEKAVEAVVEELKKLSKPVKTKEEIAQVATISANGDEEIGEL 158 (520)
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876 8999999999999999999
Q ss_pred HHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHHH
Q 009575 223 IAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAI 302 (532)
Q Consensus 223 i~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i~ 302 (532)
+++|+..++++|.|.+++|++++|++++++|++|+++|.+|+|.+++++|+++++||+|+++|++|++++++.++++++.
T Consensus 159 v~~A~~~v~~~~~i~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~l~~~~~l~~~l~~i~ 238 (520)
T cd03344 159 IAEAMEKVGKDGVITVEEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENPYILLTDKKISSIQELLPILELVA 238 (520)
T ss_pred HHHHHHHhccCCcEEEEeCCCcceeEEEEeeEEecCCCCCCccccCcccCeEEeeCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 99999999998989989999999976999999999999999999998889999999999999999999999999999999
Q ss_pred hcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceee
Q 009575 303 RGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNAS 382 (532)
Q Consensus 303 ~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~ 382 (532)
+.|+||||++++|+++++++|..|+++|.++|+|||.|++|++++++|+|||.+|||++++.+++.+++++++++||+|+
T Consensus 239 ~~~~~lvi~~~~i~~~al~~l~~~~i~~~~~v~avk~~~~~~~~~~~l~~la~~tGa~~~~~~~~~~~~~~~~~~LG~~~ 318 (520)
T cd03344 239 KAGRPLLIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDVTLEDLGRAK 318 (520)
T ss_pred hhCCCEEEEcCCCCHHHHHHHHHcCCccCceEEEEeCCCCCcccHHHHHHHHHHhCCEEecccccCCcccCCHHHCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred EEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Q 009575 383 KVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALN 462 (532)
Q Consensus 383 ~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~ 462 (532)
.|++++++++++.++++++.++.|+++++++++++.++|++++|+||+++|+|+.|||+|||+|+.+++|++|+++||+|
T Consensus 319 ~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~~r~i~Dal~ 398 (520)
T cd03344 319 KVVVTKDDTTIIGGAGDKAAIKARIAQIRKQIEETTSDYDKEKLQERLAKLSGGVAVIKVGGATEVELKEKKDRVEDALN 398 (520)
T ss_pred EEEEeeceEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEEecCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 463 ATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 463 a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++++++++|+|||||++||+++++|.+++. .++.+| +++++|++||+.||++||+|||+|+.+++++|
T Consensus 399 ~~k~a~~~g~VpGGGa~e~~~s~~L~~~~~-~~~~~~-~~~~~~a~Al~~ip~~La~NaG~d~~~vi~~l 466 (520)
T cd03344 399 ATRAAVEEGIVPGGGVALLRASPALDKLKA-LNGDEK-LGIEIVRRALEAPLRQIAENAGVDGSVVVEKV 466 (520)
T ss_pred HHHHHHhcCCCcCCcHHHHHHHHHHHHhcc-CChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 999999999999999999999999999987 767766 89999999999999999999999999998864
No 10
>KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-101 Score=806.91 Aligned_cols=473 Identities=56% Similarity=0.840 Sum_probs=462.3
Q ss_pred ccccccccccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHH
Q 009575 55 ARTPKIYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAK 134 (532)
Q Consensus 55 ~~~~~~~~~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gak 134 (532)
.+.+| | +|+|+|| .++|+.+++|++.|+|+|.+||||+|||++|.+.+|+|+|||||+|++++++|+|+.+|+||+
T Consensus 10 ~~~~r-~-ak~i~fg--~~~r~~ll~Gv~~Ladav~~TlgpKgrnViieq~~gsPkvtkdgvTva~si~l~d~~~n~gak 85 (550)
T KOG0356|consen 10 TKCVR-Y-AKDIKFG--KDVRAKLLQGVDLLADAVAVTLGPKGRNVIIEQSWGSPKVTKDGVTVAKSIELKDKYENIGAK 85 (550)
T ss_pred ccccc-c-ccccccC--HHHHHHHHhhHHHHHHHhhhhccCCcceEEcccccCCCceecCCceeeccccccchhhhhccH
Confidence 33355 6 8999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhc
Q 009575 135 LVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSA 213 (532)
Q Consensus 135 Ll~e~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~ 213 (532)
|+++++.++|+.+||||||+++|++++..++.+-+.+|.+|++|++|+.++++.++++|+++++||+.. ++.+||++|+
T Consensus 86 lvq~va~~tN~~agdGtttatvlar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~eeIaqVAtiSA 165 (550)
T KOG0356|consen 86 LVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTPEEIAQVATISA 165 (550)
T ss_pred HHHHHHhhccCccccCcchHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999988 9999999999
Q ss_pred CChhhHhHHHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHH
Q 009575 214 GNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARD 293 (532)
Q Consensus 214 ~~~~~is~li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~e 293 (532)
|+|.++++|+.+|+.++|++|+|+++.|.+++|++++++||.||+||+||||++++++++++|++|++|+++++|+++++
T Consensus 166 ngD~~ig~li~~a~~kvG~~GVItv~~gkt~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll~~kki~~v~~ 245 (550)
T KOG0356|consen 166 NGDKEIGNLISDAMKKVGRKGVITVKDGKTLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLLSEKKISSVQS 245 (550)
T ss_pred CCcHHHHHHHHHHHHHhCcCCeEEeecCCccccchhhhhcccccccccCccccccchhhhhhhhhhhhhhhhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCC-ccccC
Q 009575 294 LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVG-LALDK 372 (532)
Q Consensus 294 l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~-~~l~~ 372 (532)
+.|.+|...+...||+|+++||+.++|.+|+.|++++.++|+|||+|+|||.++..+.||+.+||++++.++.+ +++++
T Consensus 246 ivp~LE~A~~~~~PLliIAeDi~~eaL~tLIlNkLk~glqV~AvKapgfGdnrk~~l~Diai~Tg~~v~~~e~~~l~le~ 325 (550)
T KOG0356|consen 246 IVPALELALAKRRPLLIIAEDIDGEALATLVLNKLKGGLQVVAVKAPGFGDNRKNLLKDIAILTGATVFGEELSTLNLED 325 (550)
T ss_pred HhHHHHHhhhccCceEEEehhcchhHHHHHHhhhhccceeEEEEecCCCcchHHHhhhHHHHHhhhhhhccchhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988 88999
Q ss_pred CCCCCCceeeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHH
Q 009575 373 VGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKE 452 (532)
Q Consensus 373 ~~~~~lG~~~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E 452 (532)
+++++||.|.++.+++++++++.+.++++++++||+||+..++.+.++||+++++||+++|++++++|.+||+||.|++|
T Consensus 326 ~~~~dLG~~~evvvtkd~t~ll~g~~~~~~v~~rIeqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~e 405 (550)
T KOG0356|consen 326 AKLEDLGEVGEVVVTKDDTMLLKGKGNKAQVEGRIEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNE 405 (550)
T ss_pred CchhhcCcceeEEEecCcceeeCCCCCHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 453 KKLRVEDALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 453 ~k~~i~DAl~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++++++|||||+++|+++|+|||||+++++|+..|+++.. .++.+++.|++++.+||..|.++|++|||.|+..+++|+
T Consensus 406 kk~rv~dalnat~aaveeGivpGGG~all~~~~~l~~lk~-~~~~~~k~G~eiv~~Al~~P~~~IakNAGvdg~~vv~Kv 484 (550)
T KOG0356|consen 406 KKDRVEDALNATRAAVEEGIVPGGGTALLRAIPVLDELKA-TNNFDQKVGVEIVKKALRLPAQTIAKNAGVDGSVVVEKV 484 (550)
T ss_pred hhhhHHHHHHHHHHHhhcCcccCCchHHHHhhhhhhhccc-ccchHhhhhHHHHHHHHhhhHHHHHHhcCCchHHHHHHH
Confidence 9999999999999999999999999999999999999876 677888899999999999999999999999999999875
No 11
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=3.6e-100 Score=836.34 Aligned_cols=466 Identities=53% Similarity=0.847 Sum_probs=450.2
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+|++.|| .++|+.+++|+..++++|++||||+||||||+++.|+|+|||||+||+|+|++++|++|+||+|++++|++
T Consensus 3 ~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~d~~~~pgakll~e~a~~ 80 (546)
T PRK14104 3 AKEVKFG--VDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASK 80 (546)
T ss_pred cceecch--HHHHHHHHHHHHHHHHHHhhccCCCCCceEEEcCCCCeeEeccHHHHHHHhcCCCcccChHHHHHHHHHHh
Confidence 6899999 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhH
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~ 221 (532)
||+++||||||+||||++||+++.+++++|+||..|++||++|.+.+++.|+++++|+++. ++.+||++|+++++.+++
T Consensus 81 qd~e~GDGTTTvvvLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~v~~~~~l~~va~~s~~~d~~i~~ 160 (546)
T PRK14104 81 SADAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIGK 160 (546)
T ss_pred hcccccCcccHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcCchHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHH
Q 009575 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (532)
Q Consensus 222 li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i 301 (532)
+++||+.+++++|.|.++.+++++|++++++|++|+++|.+|||+++++.++.++++|+||++|.+|+++++++++++.+
T Consensus 161 lv~~Av~~vg~~g~i~v~~~~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~i 240 (546)
T PRK14104 161 FLADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEKKLSSLNELLPLLEAV 240 (546)
T ss_pred HHHHHHHHhccCCceeeEecccccceEEEEEEEEEeCCCCCcchhcCcccCceeeeCcEEEEehhhhcCHHHHHHHHHHH
Confidence 99999999999999999888888766699999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCcee
Q 009575 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (532)
Q Consensus 302 ~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~ 381 (532)
.+.|+||||++++|+++|+++|..|+++|.++|+|||+|+||+.++++|+|||++|||++++++.|++++++++++||+|
T Consensus 241 ~~~g~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~av~~~~~g~~r~~~l~~ia~~tG~~~i~~~~~~~l~~~~~~~LG~a 320 (546)
T PRK14104 241 VQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLQMLGRA 320 (546)
T ss_pred HHhCcCEEEECCCCcHHHHHHHHhCcccceeeEEEEeccCCCcchHHHHHHHHHHhCCEEEecCCCCCcCcCCHHHCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred eEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Q 009575 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (532)
Q Consensus 382 ~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl 461 (532)
+++++++++++++++|++++.+++|+++|+.++++++++|++++|+||+++|+++++||+|||+|+.+++|++|+++||+
T Consensus 321 ~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r~i~Dal 400 (546)
T PRK14104 321 KKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 400 (546)
T ss_pred eEEEEcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++++++++|+|||||++|++++..|+++.. ..+. +++++++|++||+.||++||+|||+|+.+++.+|
T Consensus 401 ~a~~~ai~~g~VpGGGa~e~~~s~~L~~~~~-~~~~-~~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l 469 (546)
T PRK14104 401 HATRAAVEEGIVPGGGVALLRASEQLKGIKT-KNDD-QKTGVEIVRKALSAPARQIAINAGEDGSVIVGKI 469 (546)
T ss_pred HHHHHHHHcCcCcCchHHHHHHHHHHHHhhc-CChH-HHHHHHHHHHHHHhhHHHHHHhCCCCHHHHHHHH
Confidence 9999999999999999999999999998743 4444 4599999999999999999999999999998764
No 12
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=4.4e-100 Score=835.47 Aligned_cols=466 Identities=58% Similarity=0.881 Sum_probs=448.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+|.+.|+ +++++.+++|++.++++|++||||+||||||+++.|+++|||||+|||++|+++||++|+||+|++++|++
T Consensus 3 ~~~~~~~--~~a~~~~~~~~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~~~a~~ 80 (541)
T PRK12851 3 AKEVKFH--VEAREKMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPTITNDGVTIAKEIELEDKFENMGAQMVREVASK 80 (541)
T ss_pred cceeccc--HHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEECCCCCeeEecCHHHHHHHccCCCchhhHHHHHHHHHHHh
Confidence 6899999 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhH
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~ 221 (532)
||+++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++|+++. ++.++|++|+++++.|++
T Consensus 81 qd~e~GDGTTtvviLa~~LL~~a~~li~~Gihp~~I~~G~~~a~~~~~~~L~~~s~~~~~~~~l~~va~~s~~~~~~l~~ 160 (541)
T PRK12851 81 TNDVAGDGTTTATVLAQAIVREGAKAVAAGANPMDLKRGIDRAVAAVVEELKANARPVTTNAEIAQVATISANGDAEIGR 160 (541)
T ss_pred hhHhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999866 899999999999999999
Q ss_pred HHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHH
Q 009575 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (532)
Q Consensus 222 li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i 301 (532)
+++||+..++++|.|.++.+....+++++++|++|+++|.+|+|++++++|+++++||+||++|++|++.+++.++++.+
T Consensus 161 lv~~Av~~vg~~g~i~i~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~i 240 (541)
T PRK12851 161 LVAEAMEKVGNEGVITVEESKTAETELEVVEGMQFDRGYLSPYFVTDADKMEAELEDPYILIHEKKISNLQDLLPVLEAV 240 (541)
T ss_pred HHHHHHHHhcccCceEEEEccCCCcceEEEEEEEecCCccccccccCCCCCeEEecccEEEEEcCCcCcHHHHHHHHHHH
Confidence 99999999999888887665444445599999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCcee
Q 009575 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (532)
Q Consensus 302 ~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~ 381 (532)
.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||+.++++|+|||.+|||++++++.+++++++++++||+|
T Consensus 241 ~~~~~~lvi~~~~I~~~al~~l~~n~i~g~~~i~av~~p~~~~~~~~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~ 320 (541)
T PRK12851 241 VQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLENVTLEQLGRA 320 (541)
T ss_pred HHhCcCEEEECCCCChHHHHHHHHcCCcCceeEEEEecCccccccHhHHHHHHHHhCCEEeccCCCCCcCcCCHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred eEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Q 009575 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (532)
Q Consensus 382 ~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl 461 (532)
+.|++.+++|+++++++++++++.|+++++++++++.++|++++|++|+++|+|+++||+|||+|+.+++|++|+++||+
T Consensus 321 ~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~er~i~DAl 400 (541)
T PRK12851 321 KKVVVEKENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGASTEVEVKEKKDRVDDAL 400 (541)
T ss_pred cEEEEEcceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+++++++++|||||||++|++++.+|++++.. ++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 401 ~a~~~al~~g~VpGGGa~e~~~s~~L~~~~~~-~~~~~-~~~~~~a~AL~~ip~~La~NaG~d~~~vl~~l 469 (541)
T PRK12851 401 HATRAAVEEGIVPGGGVALLRAVKALDKLETA-NGDQR-TGVEIVRRALEAPVRQIAENAGAEGSVVVGKL 469 (541)
T ss_pred HHHHHHHHcCcccCchHHHHHHHHHHHHHhcC-CcHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 99999999999999999999999999998765 56665 89999999999999999999999999998764
No 13
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=1.1e-80 Score=681.67 Aligned_cols=402 Identities=25% Similarity=0.399 Sum_probs=367.8
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccc
Q 009575 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (532)
Q Consensus 65 ~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d 144 (532)
+..+| .+++..|+.||..+++++++||||+||||||+++.|+++|||||+||+|+|+++||+ |+|++++|++||
T Consensus 10 ~~~~~--~~~~~~ni~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~qd 83 (519)
T TIGR02339 10 QRTKG--RDAQRNNIAAAKAVAEAVKSTLGPRGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQD 83 (519)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeECCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHHHH
Confidence 34455 789999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc--h-hHHHHHhhhcCCh-----
Q 009575 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGNN----- 216 (532)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~~~----- 216 (532)
+++||||||+++|+++||+++.+++++|+||..|++||+.|.+.+++.|+++++|++. . .|.++|+|+++++
T Consensus 84 ~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~v~~~~~~~L~~ia~tsl~sk~~~~~ 163 (519)
T TIGR02339 84 AEVGDGTTTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATKISPEDRDLLKKVAETSLTGKASAEV 163 (519)
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcccHHHHHHHHHhhhccccccch
Confidence 9999999999999999999999999999999999999999999999999999999875 3 7999999998754
Q ss_pred --hhHhHHHHHHHHhhcc---CCc-------eEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009575 217 --YEVGNMIAEAMSKVGR---KGV-------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (532)
Q Consensus 217 --~~is~li~eA~~~vg~---~g~-------I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIl 282 (532)
+.|++|+++|+.++++ +|. |.+ .+|++++|| ++++|++|+++|.+| +|+.+++||+|+
T Consensus 164 ~~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~vi~~~~~~~-------~m~~~i~n~kIl 235 (519)
T TIGR02339 164 TKDKLANLVVEAVKQVAEKRGDGKYYVDLDNIKIEKKTGGSIDDT-ELVEGIVVDKEPVHP-------GMPKRVKNAKIA 235 (519)
T ss_pred hHHHHHHHHHHHHHHHhhhccCCCcccCHHHeEEEEccCcChhcc-eeEeeEEEecCCCCC-------CCccccCCCcEE
Confidence 8899999999999985 563 334 799999999 899999999999987 378889999999
Q ss_pred eeccc-------------CCCHHHHHHHHH-----------HHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEee
Q 009575 283 LVDKK-------------ITNARDLINVLE-----------DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (532)
Q Consensus 283 l~d~~-------------I~~~~el~~~le-----------~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk 338 (532)
+++++ |++++++.++++ .+++.|+||||++++|+++++++|.++ +|++|+
T Consensus 236 ll~~~Le~~~~~~~~~~~i~~~~~~~~~l~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~------gI~~v~ 309 (519)
T TIGR02339 236 LLDAPLEVEKTEIDAKIRITDPDQIKKFLDQEEAMLKEMVDKIADAGANVVFCQKGIDDLAQHYLAKA------GILAVR 309 (519)
T ss_pred EEeccccccccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCCccHHHHHHHHHC------CCEEEe
Confidence 99998 677777766655 899999999999999999999999765 345565
Q ss_pred CCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHH
Q 009575 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (532)
Q Consensus 339 ~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~g~~~~~~i~~r~~~i~~~l~ 415 (532)
++++++|+|||++|||++++ ++++++++.||+|++|++. ++++++|++|+++
T Consensus 310 -----~v~~~~L~rIa~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~--------------- 364 (519)
T TIGR02339 310 -----RVKKSDIEKLARATGAKIVS-----SIKEITESDLGYAGLVEERKVGDDKMTFVEGCKNP--------------- 364 (519)
T ss_pred -----cCCHHHHHHHHHHhCCEEeC-----chhhCChhhccCCceEEEEEECCeEEEEEEcCCCC---------------
Confidence 66799999999999999999 4888888999999999875 4889999988653
Q ss_pred hhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccC
Q 009575 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (532)
Q Consensus 416 ~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (532)
..+||+|||+|+.+++|.+|+++||++++++++++| +|||||++||+|+.+|++++.+.
T Consensus 365 --------------------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~ 424 (519)
T TIGR02339 365 --------------------KAVTILLRGGTEHVVDELERSIQDALHVVASALEDGKVVAGGGAVEIELALRLRSYARKI 424 (519)
T ss_pred --------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEeeCCCHHHHHHHHHHHHHhhcC
Confidence 489999999999999999999999999999999999 99999999999999999998778
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++.++ +++++|++||+.||++|++|||+|+.+++.+|
T Consensus 425 ~~~~~-~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l 461 (519)
T TIGR02339 425 GGREQ-LAIEAFADALEEIPRILAENAGLDPIDALVEL 461 (519)
T ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 78776 89999999999999999999999999998764
No 14
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=1.3e-80 Score=681.19 Aligned_cols=402 Identities=25% Similarity=0.385 Sum_probs=368.8
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccc
Q 009575 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (532)
Q Consensus 65 ~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d 144 (532)
+..+| .++++.|+.|+..|+++|++||||+||||||+++.|+++|||||+||+++|+++||. |+|++++|++||
T Consensus 9 ~~~~~--~~~~~~n~~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~ 82 (517)
T cd03343 9 QRTSG--RDAQRMNIAAAKAVAEAVRTTLGPKGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQD 82 (517)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHhCCCCCCCCCceeEcCCCCEEEEccHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 35566 789999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC--ch-hHHHHHhhhcCCh-----
Q 009575 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGNN----- 216 (532)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~~----- 216 (532)
+++||||||+++|+++|++++.+++++|+||..|++||++|.+.+++.|++++++++ +. .|.+||++|++++
T Consensus 83 ~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~va~ts~~sk~~~~~ 162 (517)
T cd03343 83 EEVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVDPDDKDTLRKIAKTSLTGKGAEAA 162 (517)
T ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhhcccchhhH
Confidence 999999999999999999999999999999999999999999999999999999996 44 8999999999864
Q ss_pred -hhHhHHHHHHHHhhccCCc---------eEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009575 217 -YEVGNMIAEAMSKVGRKGV---------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (532)
Q Consensus 217 -~~is~li~eA~~~vg~~g~---------I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~ 284 (532)
+.|++|+++|+.++++++. |.+ ++|++++|| ++++|++|+++|.+|+ |++.++||+|+++
T Consensus 163 ~~~l~~l~~~A~~~v~~~~~~~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~v~~~~~~~~~-------m~~~~~n~~Illl 234 (517)
T cd03343 163 KDKLADLVVDAVLQVAEKRDGKYVVDLDNIKIEKKTGGSVDDT-ELIRGIVIDKEVVHPG-------MPKRVENAKIALL 234 (517)
T ss_pred HHHHHHHHHHHHHHhhhccCCCccccHHHeeEEeecCcCHHHc-ceeeeEEEeccCCCCC-------CccccCCCcEEEE
Confidence 8999999999999987642 666 799999999 8999999999999997 4567899999999
Q ss_pred ccc-------------CCCHHHHHHH-----------HHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCC
Q 009575 285 DKK-------------ITNARDLINV-----------LEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (532)
Q Consensus 285 d~~-------------I~~~~el~~~-----------le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~ 340 (532)
+++ +++++++.++ ++.+.+.|+||||++++|+++++++|.++ +|++|+
T Consensus 235 ~~~Le~~k~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~l~~~------gI~~v~-- 306 (517)
T cd03343 235 DAPLEVKKTEIDAKIRITSPDQLQAFLEQEEAMLKEMVDKIADTGANVVFCQKGIDDLAQHYLAKA------GILAVR-- 306 (517)
T ss_pred eccccCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHC------CcEEEE--
Confidence 998 4777776554 55899999999999999999999999865 446676
Q ss_pred CCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 009575 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (532)
Q Consensus 341 ~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~ 417 (532)
++++++|+|||++|||++++ +++++++++||+|++|++. +++|+++++|+++
T Consensus 307 ---~v~~~~l~~Ia~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~----------------- 361 (517)
T cd03343 307 ---RVKKSDMEKLARATGAKIVT-----NIDDLTPEDLGEAELVEERKVGDDKMVFVEGCKNP----------------- 361 (517)
T ss_pred ---eCCHHHHHHHHHHhCCEEec-----chhhCChhhCCccceEEEEEECCeEEEEEEcCCCC-----------------
Confidence 66799999999999999998 5888999999999999864 7889999988763
Q ss_pred hhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCC
Q 009575 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDN 496 (532)
Q Consensus 418 ~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~ 496 (532)
..+||+|||+|+.+++|++|+++||++++++++++| +|||||++||+++.+|++++.+.++
T Consensus 362 ------------------~~~TI~lrG~t~~~l~e~~~~l~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~L~~~~~~~~~ 423 (517)
T cd03343 362 ------------------KAVTILLRGGTEHVVDELERALEDALRVVADALEDGKVVAGGGAVEIELAKRLREYARSVGG 423 (517)
T ss_pred ------------------ceEEEEEECCcHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCHHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999999999 9999999999999999998877778
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 497 DEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 497 ~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
.+| +++++|++||+.||++|++|||+|+.+++.++
T Consensus 424 ~~~-~~~~~~~~aL~~ip~~L~~NaG~d~~~~~~~l 458 (517)
T cd03343 424 REQ-LAVEAFADALEEIPRTLAENAGLDPIDTLVEL 458 (517)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 776 89999999999999999999999999998764
No 15
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-82 Score=688.39 Aligned_cols=440 Identities=46% Similarity=0.666 Sum_probs=396.9
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+++..|+ .++|..|+.|++.|+++|++||||+||||||+++.|+|.|||||+||||+|+++||. |||++++|.+
T Consensus 3 ~~~~~~~--~~a~~~~~~~~~~la~~vkttLGPkG~~k~l~~~~g~~~iTnDG~tIlkeielehp~----akll~eva~~ 76 (524)
T COG0459 3 GKERKFG--EDARRSNIRAARALADAVKTTLGPKGRNKMLVDSGGDITITNDGVTILKEIELEHPG----AKLLVEVAKK 76 (524)
T ss_pred ccccccc--HHHHHHHHHHHHHHHHHHHhccCCCcCceEEecCCCCEEEecCcceehhhhhccCch----hHHHHHHHHH
Confidence 6889999 999999999999999999999999999999999977999999999999999999998 9999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch--h----HHHHHhhhcCCh
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS--E----LADVAAVSAGNN 216 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~--~----l~~va~ts~~~~ 216 (532)
||+++||||||+|||+++||+++.+++++|+||+.|++||++|.+.++++|+++++++++. + ..++++.+++++
T Consensus 77 qd~e~GDGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~~~~~~~~~~~t~v~sk~~~~~ 156 (524)
T COG0459 77 QDDEAGDGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVSDSEEELKIAITSVASKSANSD 156 (524)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhhhhhhheeeeeeccCh
Confidence 9999999999999999999999999999999999999999999999999999999999865 2 223333345567
Q ss_pred hhHhHHHHHHHHhhcc-----CCceEEe-cCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCC
Q 009575 217 YEVGNMIAEAMSKVGR-----KGVVTLE-EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITN 290 (532)
Q Consensus 217 ~~is~li~eA~~~vg~-----~g~I~v~-~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~ 290 (532)
++|++|+++|+.+++. ++++.++ .|++.+|+ ++++||+|++||.+|||.++ +.++||+||++|++|+.
T Consensus 157 ~~i~~lv~~Av~~v~~~~~d~~~i~~vk~~gg~~~e~-~vveG~~~dkg~~s~~~~~~-----~~~e~~~Ili~d~~l~~ 230 (524)
T COG0459 157 EEIGELVVEAVEKVGKEQSDLDGIIIVKESGGSETEL-EVVEGMVFDKGYLSPYFMPD-----KRLENPKILLLDKKLEI 230 (524)
T ss_pred HHHHHHHHHHHHHhcccccccCCeEEEEecCCCccce-EEEeeEEecCCccCCCCCCc-----cccccceEEEEcccccc
Confidence 9999999999999999 7877764 55666666 99999999999999997543 67899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccc
Q 009575 291 ARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLAL 370 (532)
Q Consensus 291 ~~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l 370 (532)
.++.++ ++..++.+.|+++++++++++++..++.|.+++.+++++|+.|+|+|.++++|+|++++|++++.+++++
T Consensus 231 ~k~~l~-~e~~i~~~~~l~~i~e~ee~e~l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~Ilt~~~v~~~dl~--- 306 (524)
T COG0459 231 KKPELP-LEIVISSGKPLLIIAEDEEGEALATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIAILTGRRVKKEDLG--- 306 (524)
T ss_pred ccccCc-ceeEecCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhcceecceecchhhH---
Confidence 999988 8888888889999999999999999999999999999999999999999999999999999999998764
Q ss_pred cCCCCCCCceeeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHH
Q 009575 371 DKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENA-EQDYEREKLNERIAKLSGGVAVIQVGAQTETE 449 (532)
Q Consensus 371 ~~~~~~~lG~~~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~-~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~ 449 (532)
.....+|.|+.|.+.++.+....|.+. +.++++. .++|+++++++|.++ .+++|||+|||+|+.+
T Consensus 307 --~~l~~~~ga~~v~~~~d~t~~~~G~~~-----------~~~ve~~~~~~~~~~~~~~~~~~-~~~~~tI~vrgate~~ 372 (524)
T COG0459 307 --ERLAKLGGAKIVSVLKDLTTIVLGEGA-----------AGLVEETKTGDYDMEKLQERKAK-AGGVATILVRGATEVE 372 (524)
T ss_pred --HHHHHccCceEEeecccCceeecCccc-----------cceEEEeeccchhhhhhhhhhhc-CCCeEEEEECCccHhH
Confidence 156678899999988877776665420 2344454 788999999999999 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhh
Q 009575 450 LKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVV 528 (532)
Q Consensus 450 l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~v 528 (532)
++|++|+++|||+++++++++| +|||||++|+++++.|++++.+.++.++++++++|++||+.||++||+|||+||.++
T Consensus 373 ldE~er~i~DAL~~~~~ave~g~iV~GGGa~e~~~a~~L~~~~~~~~g~~e~~~i~~~a~Ale~ip~~La~NaG~d~~~v 452 (524)
T COG0459 373 LDEKERRIEDALNVVRAAVEEGKIVPGGGAAEIEAALRLREYAMTVEGGDEQLGIEAFARALEAPPRQLAENAGLDPIEV 452 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEeCCCHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999 999999999999999999854444434559999999999999999999999999999
Q ss_pred hccC
Q 009575 529 SEKV 532 (532)
Q Consensus 529 i~kl 532 (532)
+.+|
T Consensus 453 ~~~L 456 (524)
T COG0459 453 LSKL 456 (524)
T ss_pred HHHH
Confidence 9874
No 16
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=7.1e-81 Score=677.23 Aligned_cols=392 Identities=24% Similarity=0.387 Sum_probs=358.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+++..|+.++..|+++|++||||+||||||++++|+++|||||+|||++|+++||+ ++|+.++|++||+++||||
T Consensus 11 ~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----a~l~~~~a~~qd~~~GDGT 86 (484)
T cd03342 11 GQALAVNISAAKGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLSEMQIQHPT----ASMIARAATAQDDITGDGT 86 (484)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCceEEECCCCCEEEeccHHHHHHhccCcCHH----HHHHHHHHHHhhhHhCCCh
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC---ch-hHHHHHhhhcCCh------hhHhH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE---DS-ELADVAAVSAGNN------YEVGN 221 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~---~~-~l~~va~ts~~~~------~~is~ 221 (532)
||++||+++||+++.+++++|+||..|++||++|.+.+++.|++++++++ +. .+.+||++|++++ +.|++
T Consensus 87 Tt~vvLa~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~l~~va~ts~~sk~~~~~~~~l~~ 166 (484)
T cd03342 87 TSNVLLIGELLKQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVPVEIDTDRELLLSVARTSLRTKLHADLADQLTE 166 (484)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhCcccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997 44 8999999999864 89999
Q ss_pred HHHHHHHhhccCC-c-------eEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHH
Q 009575 222 MIAEAMSKVGRKG-V-------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARD 293 (532)
Q Consensus 222 li~eA~~~vg~~g-~-------I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~e 293 (532)
++++|+..+++++ . |...+|++++|+ ++++|++|+++|.+|+ |+++++||+|+++|++|+.++.
T Consensus 167 l~~~A~~~v~~~~~~~~~~~I~i~ki~ggs~~ds-~~i~G~~~~~~~~~~~-------m~~~~~n~~Ill~~~~le~~~~ 238 (484)
T cd03342 167 IVVDAVLAIYKPDEPIDLHMVEIMQMQHKSDSDT-KLIRGLVLDHGARHPD-------MPKRVENAYILTCNVSLEYEKT 238 (484)
T ss_pred HHHHHHHHHhhcCCccChhHeEEEEecCCChhhc-eEEeeEEEecCCCCCC-------CCccccCceEEEEeCCCCCCcc
Confidence 9999999999875 1 223589999999 8999999999999997 4677899999999999987654
Q ss_pred HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCC
Q 009575 294 LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKV 373 (532)
Q Consensus 294 l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~ 373 (532)
-.+ ...-.+|||++++|+++++++|.+| +|+||+ ++++++|+|||++|||++++ +++++
T Consensus 239 ~~~-----~~~~~~lvi~~~~I~~~al~~l~~~------~I~av~-----~~~~~~l~~ia~~tGa~ii~-----~l~~~ 297 (484)
T cd03342 239 EVN-----SGFFYSVVINQKGIDPPSLDMLAKE------GILALR-----RAKRRNMERLTLACGGVAMN-----SVDDL 297 (484)
T ss_pred ccC-----cEEEEEEEEeCCCccHHHHHHHHHC------CCeEEE-----eCCHHHHHHHHHHhCCEEec-----ccccC
Confidence 211 0112469999999999999999988 468888 45689999999999999999 58899
Q ss_pred CCCCCceeeEE---EEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHH
Q 009575 374 GKEVLGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETEL 450 (532)
Q Consensus 374 ~~~~lG~~~~v---~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l 450 (532)
++++||+|++| ++++++++++++++++ +.+||+|||+|+.++
T Consensus 298 ~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~-----------------------------------~~~tI~lrg~t~~~l 342 (484)
T cd03342 298 SPECLGYAGLVYERTLGEEKYTFIEGVKNP-----------------------------------KSCTILIKGPNDHTI 342 (484)
T ss_pred ChhhCcccceEEEEEECCeEEEEEECCCCC-----------------------------------cEEEEEEeCCCHHHH
Confidence 99999999999 5678899999988763 589999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhh
Q 009575 451 KEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVS 529 (532)
Q Consensus 451 ~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi 529 (532)
+|.+|+++||++++++++++| +||||||+||+|+.+|++++...++.+| +++++|++||+.||++||+|||+|+.+++
T Consensus 343 ~E~er~l~DAl~~vk~~~~~~~~vpGGGa~e~~ls~~L~~~~~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~~l 421 (484)
T cd03342 343 TQIKDAIRDGLRAVKNAIEDKCVVPGAGAFEVALYAHLKEFKKSVKGKAK-LGVQAFADALLVIPKTLAENSGLDVQETL 421 (484)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 999999999999999999999 9999999999999999999877778776 89999999999999999999999999998
Q ss_pred ccC
Q 009575 530 EKV 532 (532)
Q Consensus 530 ~kl 532 (532)
.+|
T Consensus 422 ~~l 424 (484)
T cd03342 422 VKL 424 (484)
T ss_pred HHH
Confidence 764
No 17
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=5.3e-80 Score=677.30 Aligned_cols=402 Identities=26% Similarity=0.348 Sum_probs=363.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+++..|++||..|+++|++||||+||||||+++.|+++|||||+||+++|+++||+ |+|++++|++||+++||||
T Consensus 7 ~~~~~~ni~a~~~l~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~q~~~~GDGT 82 (527)
T cd03335 7 QDVRTQNVTAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDKEVGDGT 82 (527)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeCcHHHHHHhccccChH----HHHHHHHHHHHHHHhCCCc
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHh-cccccC--ch-hHHHHHhhhcC------ChhhHhH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVE--DS-ELADVAAVSAG------NNYEVGN 221 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~-~s~~v~--~~-~l~~va~ts~~------~~~~is~ 221 (532)
||++||+++||+++.+++++|+||..|++||+.|.+.+++.|++ +++|++ +. .|.++|+|+++ +.+.|++
T Consensus 83 Tt~vvLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~ 162 (527)
T cd03335 83 TSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVDNLGKESLINVAKTSMSSKIIGADSDFFAN 162 (527)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhcccccchhHHHHHH
Confidence 99999999999999999999999999999999999999999996 899987 44 89999999987 3489999
Q ss_pred HHHHHHHhhcc---CCc-------e--EEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC
Q 009575 222 MIAEAMSKVGR---KGV-------V--TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (532)
Q Consensus 222 li~eA~~~vg~---~g~-------I--~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~ 289 (532)
++++|+..++. +|. | ...+|++++|+ ++++|++|+++|.+| +|+++++||+|++++++|+
T Consensus 163 l~~~A~~~v~~~~~~~~~~~~~~~I~i~~~~Ggs~~~s-~li~Givi~~~~~~~-------~m~~~i~n~kIlll~~~Le 234 (527)
T cd03335 163 MVVDAILAVKTTNEKGKTKYPIKAVNILKAHGKSAKES-YLVNGYALNCTRASQ-------GMPTRVKNAKIACLDFNLQ 234 (527)
T ss_pred HHHHHHHHhhcccccCCCccCHHHeEEEEecCcChhhc-ceeeeEEEecccCCC-------CCcccccCCcEEEEeccCC
Confidence 99999999952 232 2 24689999999 899999999999987 4788899999999999875
Q ss_pred C-------------HHH-----------HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCcc
Q 009575 290 N-------------ARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (532)
Q Consensus 290 ~-------------~~e-----------l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~ 345 (532)
. +.+ +.++++.+.+.|+||||++++|+++++++|.++ +|++++ ++
T Consensus 235 ~~~~~~~~~~~~~~~~~le~~~~~E~~~l~~~i~~i~~~g~~lvi~~k~I~d~al~~L~~~------~I~~v~-----~v 303 (527)
T cd03335 235 KTKMKLGVQVVVTDPEKLEKIRQRESDITKERIKKILAAGANVVLTTGGIDDMCLKYFVEA------GAMAVR-----RV 303 (527)
T ss_pred CCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHC------CcEEEE-----eC
Confidence 4 222 346788888999999999999999999999987 456666 67
Q ss_pred chhhHHHHHHHhCCeEeecCCCc-cccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHH
Q 009575 346 KSQYLDDIAILTGGTVIRDEVGL-ALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (532)
Q Consensus 346 ~k~~L~~ia~~tG~~ii~~~~~~-~l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~ 421 (532)
++++|+|||++|||+++++..++ ..+++++++||+|++|+ ++++++++|.++++
T Consensus 304 ~~~~lerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~~~---------------------- 361 (527)
T cd03335 304 KKEDLRRIAKATGATLVSTLANLEGEETFDPSYLGEAEEVVQERIGDDELILIKGTKK---------------------- 361 (527)
T ss_pred CHHHHHHHHHHhCCEEecChhhcCcccccCHhhCccCceEEEEEECCeEEEEEEcCCC----------------------
Confidence 79999999999999999975443 22456677999999999 67889999998865
Q ss_pred HHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHH
Q 009575 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (532)
Q Consensus 422 e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (532)
+++|||+|||+|+.+++|.+|+++||++++++++++| +|||||++||+|+.+|+++++..++.+|
T Consensus 362 -------------~~~~TIllrG~t~~~l~e~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~L~~~~~~~~~~~~- 427 (527)
T cd03335 362 -------------RSSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGSREQ- 427 (527)
T ss_pred -------------CCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhccCcHHH-
Confidence 3699999999999999999999999999999999999 9999999999999999999887877776
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 501 ~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+++++|++||+.||++||+|||+|+.+++.+|
T Consensus 428 ~~i~~~a~aL~~ip~~La~NaG~d~~~~~~~l 459 (527)
T cd03335 428 LAIAEFAEALLVIPKTLAVNAAKDATELVAKL 459 (527)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 89999999999999999999999999998764
No 18
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.3e-79 Score=673.23 Aligned_cols=397 Identities=23% Similarity=0.378 Sum_probs=360.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+++..|+.+|..|+++|+|||||+||||||+++.|+++|||||+||+++|+++||+ ++|+.++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~vkttlGP~G~~Kmi~~~~G~~~ITnDG~TIlk~i~i~hP~----a~ll~~~a~~qd~~~GDGT 90 (531)
T TIGR02347 15 DAALMMNINAARGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLNEMQIQHPT----ASMIARAATAQDDITGDGT 90 (531)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccceEEEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHHhhhhhcCcH
Confidence 779999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhccccc---Cch-hHHHHHhhhcCC------hhhHhH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV---EDS-ELADVAAVSAGN------NYEVGN 221 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v---~~~-~l~~va~ts~~~------~~~is~ 221 (532)
||++||+++||+++.+++++|+||..|++||+.|.+.+++.|+++++++ .+. .|.++|+|++++ +++|++
T Consensus 91 TtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~ 170 (531)
T TIGR02347 91 TSTVILIGELLKQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIKTEDEVDRELLLNVARTSLRTKLPIDLADQLTE 170 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhccccchhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999765 344 899999999864 889999
Q ss_pred HHHHHHHhhccCCc------eEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCH--
Q 009575 222 MIAEAMSKVGRKGV------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA-- 291 (532)
Q Consensus 222 li~eA~~~vg~~g~------I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~-- 291 (532)
++++|+..++++|. |.+ .+|++.+|+ ++++|++|+++|.+|+ |+++++||+|+++|++|+..
T Consensus 171 iv~~Av~~v~~~~~~i~~~~I~i~k~~g~s~~ds-~~v~Giv~~~~~~~~~-------~~~~~~n~~Ill~~~~le~~~~ 242 (531)
T TIGR02347 171 IVVDAVLAIKKDGEQIDLFMVEIMEMKHKSATDT-TLIRGLVLDHGARHPD-------MPRRVKNAYILTCNVSLEYEKT 242 (531)
T ss_pred HHHHHHHHHhhcCCCCChhHeEEEEecCCCcccc-EEEeeEEEecCcCCCC-------CceeccCceEEEEeCCCCCCcc
Confidence 99999999988753 333 578999999 8999999999999997 46688999999999987433
Q ss_pred -----------HH-----------HHHHHHHHHhcCC-------C---eEEEcccccHHHHHHHHHhhhcccceEEEeeC
Q 009575 292 -----------RD-----------LINVLEDAIRGAY-------P---ILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (532)
Q Consensus 292 -----------~e-----------l~~~le~i~~~g~-------~---lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~ 339 (532)
++ +...++++++.+. + ||+++++|++.++++|.++ +|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I~~~a~~~L~~~------~I~~i~- 315 (531)
T TIGR02347 243 EVNSGFFYSNAEQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGIDPPSLDLLAKE------GIMALR- 315 (531)
T ss_pred ccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCccHHHHHHHHHC------CceEEc-
Confidence 22 3445677777551 4 9999999999999999886 457776
Q ss_pred CCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEE---EEeCceEEEEcCCCChhhHHHHHHHHHHHHHh
Q 009575 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (532)
Q Consensus 340 ~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v---~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~ 416 (532)
++++++|+|||++|||++++ +++++++++||+|++| +++++++++|.+|+++
T Consensus 316 ----rv~~~~le~ia~~tGa~~i~-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~---------------- 370 (531)
T TIGR02347 316 ----RAKRRNMERLTLACGGEALN-----SVEDLTPECLGWAGLVYETSIGEEKYTFIEEVKNP---------------- 370 (531)
T ss_pred ----cCCHHHHHHHHHHhCCEEec-----ccccCCccccccceEEEEEEECCeEEEEEEcCCCC----------------
Confidence 56689999999999999998 5889999999999999 5788899999988763
Q ss_pred hhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCC
Q 009575 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (532)
Q Consensus 417 ~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~ 495 (532)
.+|||+|||+|+.+++|++|+++||++++++++++| +||||||+||+|+.+|++++.+.+
T Consensus 371 -------------------~~~TI~lrG~t~~~l~E~er~l~DAl~v~~~~~~~~~vvpGGGa~E~~ls~~l~~~~~~~~ 431 (531)
T TIGR02347 371 -------------------KSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIEDKCVVPGAGAFEIAAYCHLKEEKKSVK 431 (531)
T ss_pred -------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhcCC
Confidence 589999999999999999999999999999999999 999999999999999999987787
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 496 ~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 432 ~~~~-~~i~~fa~ALe~ip~~La~NaG~d~~~vl~~l 467 (531)
T TIGR02347 432 GKAK-LGVEAFANALLVIPKTLAENSGLDAQDTLVKL 467 (531)
T ss_pred CHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 8777 89999999999999999999999999998764
No 19
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=6.1e-80 Score=677.82 Aligned_cols=402 Identities=24% Similarity=0.348 Sum_probs=363.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.++++.|++||..|+++|++||||+||||||++++|+++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 11 ~~~~~~ni~~~~~l~~~vkttlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~qd~~~GDGT 86 (536)
T TIGR02340 11 QDVRTQNVTAAMAIANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDREVGDGT 86 (536)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeccHHHHHHHhcccChH----HHHHHHHHHHHHHHhCCCh
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhc-ccccC--ch-hHHHHHhhhcC------ChhhHhH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQM-SKEVE--DS-ELADVAAVSAG------NNYEVGN 221 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~-s~~v~--~~-~l~~va~ts~~------~~~~is~ 221 (532)
||++||+++||+++.+++++|+||..|++||+.|.+.+++.|+++ ++|++ +. ++.++|+|+++ +++.|++
T Consensus 87 Tt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~ 166 (536)
T TIGR02340 87 TSVVIIAAELLKRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSVSVDELGREALINVAKTSMSSKIIGLDSDFFSN 166 (536)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHHHHHHhccccchhhHHHHHH
Confidence 999999999999999999999999999999999999999999975 88987 44 89999999987 6789999
Q ss_pred HHHHHHHhhc---cCCc-------eEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC
Q 009575 222 MIAEAMSKVG---RKGV-------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (532)
Q Consensus 222 li~eA~~~vg---~~g~-------I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~ 289 (532)
++++|+..++ .+|. |.+ ++|++++|+ ++++|++|+++|.+| +|+++++||+|++++++|+
T Consensus 167 l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~G~s~~~s-~~i~Gi~i~~~~~~~-------~m~~~~~n~kIli~~~~L~ 238 (536)
T TIGR02340 167 IVVDAVLAVKMTNENGETKYPIKAVNILKAHGGSARES-YLVKGYALNCTRASQ-------QMPKRIKKAKIACLDFNLQ 238 (536)
T ss_pred HHHHHHHHHhcccccCccccchHHeEEEEecCCCcccc-EEEEEEEEecccCCC-------CCcceecCCcEEEEecCCC
Confidence 9999999996 2342 222 699999888 899999999999887 4788999999999999874
Q ss_pred CHH------------------------HHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCcc
Q 009575 290 NAR------------------------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (532)
Q Consensus 290 ~~~------------------------el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~ 345 (532)
..+ .+.+.++.+++.|++|||++++|++.++++|++++ +++++ ++
T Consensus 239 ~~~~~~~~~~~~~~~~~le~~~~~E~~~i~~~i~~I~~~g~~lvi~~k~I~~~a~~~L~k~~------I~~i~-----rv 307 (536)
T TIGR02340 239 KQKMALGVQIVVDDPAKLEGIRQREADITKERIKKILKAGANVVLTTGGIDDMCLKYFVEAG------AMGVR-----RC 307 (536)
T ss_pred CCcccCceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHCC------cEEEe-----cC
Confidence 432 12356788889999999999999999999999874 56665 66
Q ss_pred chhhHHHHHHHhCCeEeecCCCc-cccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHH
Q 009575 346 KSQYLDDIAILTGGTVIRDEVGL-ALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (532)
Q Consensus 346 ~k~~L~~ia~~tG~~ii~~~~~~-~l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~ 421 (532)
++++|+|||++|||+++++..++ ..+++++++||+|++|+ +++++|++|.+++++
T Consensus 308 ~~~~LerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~--------------------- 366 (536)
T TIGR02340 308 KKEDLKRIAKATGGTLVSTLADLEGEETFDASYLGFADEVVEERIADDECILIKGTKGR--------------------- 366 (536)
T ss_pred CHHHHHHHHHHhCCEEecchhhcCccccccccccccCceEEEEEECCeEEEEEEcCCCC---------------------
Confidence 79999999999999999976554 33456778899999999 788899999987653
Q ss_pred HHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHH
Q 009575 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (532)
Q Consensus 422 e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (532)
.+|||+|||+|+.+++|++|+++||++++++++++| +|||||++||+++.+|+++++..++.+|
T Consensus 367 --------------~~~TIlirG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vVpGGGa~e~~ls~~l~~~~~~~~~~~~- 431 (536)
T TIGR02340 367 --------------KSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGSREQ- 431 (536)
T ss_pred --------------CEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhcCCCEEECCCHHHHHHHHHHHHHhhhCCChhH-
Confidence 489999999999999999999999999999999999 9999999999999999998777777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 501 ~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+++++|++||+.||++||+|||+|+.+++.+|
T Consensus 432 ~~~~~fa~AL~~ip~~La~NaG~d~~~~l~~l 463 (536)
T TIGR02340 432 LAIAEFAEALLIIPKVLAVNAALDSTELVAKL 463 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 89999999999999999999999999998764
No 20
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.3e-79 Score=672.75 Aligned_cols=404 Identities=23% Similarity=0.316 Sum_probs=361.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.++++.|+.+|..++++|++||||+||||||++++|+++|||||+||+++|+++||+ |+|++++|++||+++||||
T Consensus 7 ~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hp~----a~ll~~~a~~q~~~~GDGT 82 (515)
T cd03338 7 ADVRLSNIQAAKAVADAIRTSLGPRGMDKMIQTGKGEVIITNDGATILKQMSVLHPA----AKMLVELSKAQDIEAGDGT 82 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeeCCCCCEEEECcHHHHHHhCcCcCHH----HHHHHHHHHHHHhHhcCCc
Confidence 568899999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC--ch-hHHHHHhhhcC------ChhhHhHH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAG------NNYEVGNM 222 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~------~~~~is~l 222 (532)
||++||+++|++++.++++.|+||..|++||++|.+.+++.|++++++++ +. +|.++|+||++ ++++|++|
T Consensus 83 tt~vvLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~~~~l~~va~ts~~sK~~~~~~~~ls~l 162 (515)
T cd03338 83 TSVVVLAGALLSACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIPVDLNDRESLIKSATTSLNSKVVSQYSSLLAPI 162 (515)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHhccccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999986 44 89999999998 57899999
Q ss_pred HHHHHHhhccCCc----------eEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC---
Q 009575 223 IAEAMSKVGRKGV----------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (532)
Q Consensus 223 i~eA~~~vg~~g~----------I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~--- 289 (532)
+++|+.++++++. |.+++|++++|| ++++|++|+++|.+|++ +|..++||++++++++|+
T Consensus 163 i~~A~~~v~~~~~~~~~d~~~i~i~~~~Ggs~~ds-~lv~Giv~~k~~~~~~~------~p~~i~n~ki~ll~~~le~~~ 235 (515)
T cd03338 163 AVDAVLKVIDPATATNVDLKDIRIVKKLGGTIEDT-ELVDGLVFTQKASKKAG------GPTRIEKAKIGLIQFCLSPPK 235 (515)
T ss_pred HHHHHHHhhcccccCcCCHHHeEEEEecCCChhhc-eeeeeEEEeccccCcCC------CCccccCCcEEEEeccccccc
Confidence 9999999998763 555799999999 99999999999999752 355678899988877642
Q ss_pred ----------CH-----------HHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchh
Q 009575 290 ----------NA-----------RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (532)
Q Consensus 290 ----------~~-----------~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~ 348 (532)
++ +++.++++.+++.|+||||++++|++++++.++.+.+++ .+|+||+ +++++
T Consensus 236 ~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~i~~~~v~~l~~~~l~~-~~I~av~-----~~~~~ 309 (515)
T cd03338 236 TDMDNNIVVNDYAQMDRILREERKYILNMCKKIKKSGCNVLLIQKSILRDAVSDLALHFLAK-LKIMVVK-----DIERE 309 (515)
T ss_pred cccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHHH-CCceEEe-----cCCHH
Confidence 22 345678999999999999999999544444444444443 4788888 67799
Q ss_pred hHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHH
Q 009575 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREK 425 (532)
Q Consensus 349 ~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~ 425 (532)
+|+|||++|||++++ +++++++++||+|+.|++. ++.++++.++.+
T Consensus 310 ~LerIa~~tGa~ii~-----sl~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~-------------------------- 358 (515)
T cd03338 310 EIEFICKTIGCKPVA-----SIDHFTEDKLGSADLVEEVSLGDGKIVKITGVKN-------------------------- 358 (515)
T ss_pred HHHHHHHHHCCEEec-----ccccCCHhhCCCCceEEEEEECCeEEEEEEecCC--------------------------
Confidence 999999999999999 5888999999999999863 557888887753
Q ss_pred HHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHH
Q 009575 426 LNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 504 (532)
Q Consensus 426 l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~ 504 (532)
++++|||+|||+|+.+++|++|+++||++++++++++| +|||||++||+|+.+|++++.+.++.+| ++++
T Consensus 359 --------~~~~~TIllrG~t~~~l~e~~r~i~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~~-~~~~ 429 (515)
T cd03338 359 --------PGKTVTILVRGSNKLVLDEAERSLHDALCVIRCLVKKRALIPGGGAPEIEIALQLSEWARTLTGVEQ-YCVR 429 (515)
T ss_pred --------CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECCCHHHHHHHHHHHHHhccCCcHHH-HHHH
Confidence 24689999999999999999999999999999999999 9999999999999999999877777776 8999
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 505 IVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 505 ~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+|++||+.||++|++|||+|+.+++.+|
T Consensus 430 ~~a~al~~ip~~L~~NaG~d~~~~~~~l 457 (515)
T cd03338 430 AFADALEVIPYTLAENAGLNPISIVTEL 457 (515)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 9999999999999999999999998764
No 21
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.5e-79 Score=671.88 Aligned_cols=402 Identities=24% Similarity=0.349 Sum_probs=364.1
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccc
Q 009575 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (532)
Q Consensus 65 ~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d 144 (532)
+..|| .++++.|+.|+..|++++++||||+||||||+++.|+++|||||+||+++|+++||+ |+|++++|++||
T Consensus 17 ~~~~~--~~~~~~ni~~~~~i~~~v~tslGP~G~~kmi~~~~G~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~q~ 90 (526)
T cd03339 17 KRLKG--LEAHKSHILAAKSVANILRTSLGPRGMDKILVSPDGEVTVTNDGATILEKMDVDHQI----AKLLVELSKSQD 90 (526)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEECCCCCEEEeCcHHHHHHHhcccCHH----HHHHHHHHHhhh
Confidence 57888 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc----h-hHHHHHhhhcCC----
Q 009575 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN---- 215 (532)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~----~-~l~~va~ts~~~---- 215 (532)
+++||||||+++|+++||+++.+++++|+||..|++||+.|.+.+++.|+++++|++. . .|.++|+||++.
T Consensus 91 ~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~ 170 (526)
T cd03339 91 DEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADKIEFSPDNKEPLIQTAMTSLGSKIVS 170 (526)
T ss_pred hhhcCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCcccHHHHHHHHHHhhcccchh
Confidence 9999999999999999999999999999999999999999999999999999999862 3 799999999874
Q ss_pred --hhhHhHHHHHHHHhhccC-------Cce--EEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009575 216 --NYEVGNMIAEAMSKVGRK-------GVV--TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (532)
Q Consensus 216 --~~~is~li~eA~~~vg~~-------g~I--~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~ 284 (532)
.+.|++++++|+..+.+. ..| ...+|++++|| ++++|++|+++|.+|+| +..++||||+++
T Consensus 171 ~~~~~~s~i~v~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS-~~v~Givi~~~~~~~~m-------~~~~~n~kI~ll 242 (526)
T cd03339 171 RCHRQFAEIAVDAVLSVADLERKDVNFELIKVEGKVGGRLEDT-KLVKGIVIDKDFSHPQM-------PKEVKDAKIAIL 242 (526)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCccchHHeEEEEecCcCHHHc-ceeeeEEEecccCCCCC-------CceecCCCEEEE
Confidence 478999999999988531 123 33699999999 89999999999999975 445678999988
Q ss_pred ccc-------------CCCHHH-----------HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCC
Q 009575 285 DKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (532)
Q Consensus 285 d~~-------------I~~~~e-----------l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~ 340 (532)
+++ ++++++ +.++++++.+.|+||||++++|+++++++|.+|+ |.||+.
T Consensus 243 ~~~le~~~~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~~- 315 (526)
T cd03339 243 TCPFEPPKPKTKHKLDITSVEDYKKLQEYEQKYFREMVEQVKDAGANLVICQWGFDDEANHLLLQNG------LPAVRW- 315 (526)
T ss_pred EecccCCccccceEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCHHHHHHHHHCC------CEEEEe-
Confidence 865 355555 6777999999999999999999999999999874 467775
Q ss_pred CCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---e--CceEEEEcCCCChhhHHHHHHHHHHHHH
Q 009575 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---T--KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (532)
Q Consensus 341 ~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~--~~~~~~i~g~~~~~~i~~r~~~i~~~l~ 415 (532)
+++++|+|||++|||++++ ++++++++.||+|+.|+. + +++++++++|+++
T Consensus 316 ----v~~~~LerIa~~tGa~ii~-----~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~i~g~~~~--------------- 371 (526)
T cd03339 316 ----VGGVEIELIAIATGGRIVP-----RFEDLSPEKLGKAGLVREISFGTTKDKMLVIEGCPNS--------------- 371 (526)
T ss_pred ----CCHHHHHHHHHHhCCEEec-----chhhCChhhcccCceEEEEEecCCCcEEEEEECCCCC---------------
Confidence 4578899999999999999 588999999999999973 3 4688999988753
Q ss_pred hhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccC
Q 009575 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (532)
Q Consensus 416 ~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (532)
+.+||+|||+|+.+++|.||+++||++++++++++| +|||||++||+++++|++++..+
T Consensus 372 --------------------~~~TIllrG~t~~~l~E~er~l~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~ 431 (526)
T cd03339 372 --------------------KAVTIFIRGGNKMIIEEAKRSLHDALCVVRNLIRDNRIVYGGGAAEISCSLAVEKAADKC 431 (526)
T ss_pred --------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhhCCCEEeCCCHHHHHHHHHHHHHhccC
Confidence 589999999999999999999999999999999999 99999999999999999998778
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++.+| +++++|++||+.||++|++|||+|+.+++.+|
T Consensus 432 ~~~~~-~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l 468 (526)
T cd03339 432 SGIEQ-YAMRAFADALESIPLALAENSGLNPIETLSEV 468 (526)
T ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 88776 89999999999999999999999999998764
No 22
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.5e-78 Score=665.34 Aligned_cols=400 Identities=22% Similarity=0.344 Sum_probs=365.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+++..|+.+|..|+++|++||||+||||||+++.|+++|||||+||+++|+++||+ |+|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~i~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~q~~~~GDGT 90 (522)
T cd03340 15 KGQLISNINACQAIADAVRTTLGPRGMDKLIVDGRGKVTISNDGATILKLLDIVHPA----AKTLVDIAKSQDAEVGDGT 90 (522)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEEEcCCCCEEEeccHHHHHHHccccCHH----HHHHHHHHHHhHhHhCCCh
Confidence 679999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc------h-hHHHHHhhhcC------Chhh
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED------S-ELADVAAVSAG------NNYE 218 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~------~-~l~~va~ts~~------~~~~ 218 (532)
||+|+|+++||+++.++++.|+||..|++||+.|.+.+++.|+++++++++ . .|.++|+++++ ++++
T Consensus 91 tt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ 170 (522)
T cd03340 91 TSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEEQRELLEKCAATALNSKLIASEKEF 170 (522)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCcccccccHHHHHHHHHHHhccCcchhHHHH
Confidence 999999999999999999999999999999999999999999999998864 3 69999999976 5799
Q ss_pred HhHHHHHHHHhhccCC---ceE--EecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccC-----
Q 009575 219 VGNMIAEAMSKVGRKG---VVT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI----- 288 (532)
Q Consensus 219 is~li~eA~~~vg~~g---~I~--v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I----- 288 (532)
|++++++|+.++++++ .|+ ..+|++++|| ++++|++|+++|.+|+|.+ |++.++||+|+++++++
T Consensus 171 l~~l~~~A~~~v~~~~~~~~I~i~~i~Ggs~~ds-~lv~Giv~~k~~~~~~~~~----~~~~~~n~kIll~~~~Le~~~~ 245 (522)
T cd03340 171 FAKMVVDAVLSLDDDLDLDMIGIKKVPGGSLEDS-QLVNGVAFKKTFSYAGFEQ----QPKKFKNPKILLLNVELELKAE 245 (522)
T ss_pred HHHHHHHHHHHhcccCChhHheEeeecCCChhhc-eeeeeEEEecccCcccccc----CCccccCCeEEEEeCCCCCCcc
Confidence 9999999999998865 333 2489999999 8999999999999998753 56779999999999984
Q ss_pred --------CCHHH-----------HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhh
Q 009575 289 --------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (532)
Q Consensus 289 --------~~~~e-----------l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~ 349 (532)
+++.+ +.+.++.+++.|+++|++++.|++.++++|.+++ |++++ ++++++
T Consensus 246 ~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~vvl~~~~i~d~a~~~l~~~~------I~~~~-----~v~~~~ 314 (522)
T cd03340 246 KDNAEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSGANVVLSKLPIGDLATQYFADRD------IFCAG-----RVPEED 314 (522)
T ss_pred ccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcHHHHHHHHHCC------cEEEE-----eCCHHH
Confidence 44443 4667888999999999999999999999999873 45555 567899
Q ss_pred HHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHH
Q 009575 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (532)
Q Consensus 350 L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l 426 (532)
|++||++|||++++ +++++++++||+|+.|+ ++++++++|.+|..+
T Consensus 315 l~rIa~~tGa~ii~-----~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~-------------------------- 363 (522)
T cd03340 315 LKRVAQATGGSIQT-----TVSNITDDVLGTCGLFEERQVGGERYNIFTGCPKA-------------------------- 363 (522)
T ss_pred HHHHHHHHCCEEee-----ccccCCccccccceEEEEEEECCEEEEEEECCCCC--------------------------
Confidence 99999999999999 48889999999999998 577899999988653
Q ss_pred HHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHH
Q 009575 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (532)
Q Consensus 427 ~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (532)
..+||++||+|+..++|.+|+++||++++++++++| +|||||++||+++.+|++++++.++++| +++++
T Consensus 364 ---------~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGG~~E~~ls~~l~~~~~~~~~~~~-~~~~~ 433 (522)
T cd03340 364 ---------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQQ-LVINA 433 (522)
T ss_pred ---------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHHH-HHHHH
Confidence 589999999999999999999999999999999998 9999999999999999999877777776 89999
Q ss_pred HHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 506 VKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 506 ~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++||+.||++|++|||+|+.+++.+|
T Consensus 434 fa~aL~~ip~~La~NaG~d~~~~l~~l 460 (522)
T cd03340 434 FAKALEIIPRQLCDNAGFDATDILNKL 460 (522)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 999999999999999999999998764
No 23
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.4e-78 Score=665.91 Aligned_cols=397 Identities=24% Similarity=0.380 Sum_probs=359.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+++..|+.||..|++++++||||+||||||+++.|+++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 26 ~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~G~~~ITnDG~tIlk~l~~~hP~----akll~~~a~~qd~~~GDGT 101 (532)
T TIGR02343 26 LEAIKSNIAAAKSVASILRTSLGPKGMDKMLQSPDGDITVTNDGATILSQMDVDNPI----AKLMVELSKSQDDEIGDGT 101 (532)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCCCCEEEeCcHHHHHHHccCCCHH----HHHHHHHHHHHHHHhcCCc
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc----h-hHHHHHhhhcCC------hhhHh
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN------NYEVG 220 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~----~-~l~~va~ts~~~------~~~is 220 (532)
||+++|+++||+++.+++++|+||..|++||+.|++.+++.|++++++++. . .|.++|+|+++. .+.|+
T Consensus 102 ttvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ls 181 (532)
T TIGR02343 102 TGVVVLAGALLEQAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEEISDDNNNKEPLIQAAKTSLGSKIVSKCHRRFA 181 (532)
T ss_pred ccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcCCCCHHHHHHHHHHhhccchhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999998853 3 799999998764 57899
Q ss_pred HHHHHHHHhhccC--C-----ce--EEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc----
Q 009575 221 NMIAEAMSKVGRK--G-----VV--TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK---- 287 (532)
Q Consensus 221 ~li~eA~~~vg~~--g-----~I--~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~---- 287 (532)
++++||+..+... + .| ...+|++++|| ++++|++|+++|.+|+ |+..++||||++++++
T Consensus 182 ~i~~~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds-~~v~Gi~i~~~~~~~~-------m~~~~~n~kI~l~~~~le~~ 253 (532)
T TIGR02343 182 EIAVDAVLMVADMERRDVDFDLIKVEGKVGGSLEDT-KLIKGIIIDKDFSHPQ-------MPKEVKDAKIAILTCPFEPP 253 (532)
T ss_pred HHHHHHHHhhhhcCCCcCCHHHeeEEEecCCCcccc-eeEeeEEEecCcCCCC-------CCeeecCCcEEEEEeecccc
Confidence 9999999988531 1 23 33699999999 9999999999999987 4556788999998875
Q ss_pred ---------CCCHHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccch
Q 009575 288 ---------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (532)
Q Consensus 288 ---------I~~~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k 347 (532)
+++++++ .++++++++.|+||||++++|+++++++|.+|+ +.+|+. +++
T Consensus 254 ~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~l~~i~~~g~~lvi~~~~I~~~al~~L~~~~------i~~v~~-----~~~ 322 (532)
T TIGR02343 254 KPKTKHKLDISSVEEYKKLQKYEQQKFAEMIDDIKKSGANIVICQWGFDDEANHLLLQND------LPAVRW-----VGG 322 (532)
T ss_pred ccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHHCC------cEEEEc-----CCH
Confidence 4556655 778999999999999999999999999999984 456764 457
Q ss_pred hhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eC--ceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHH
Q 009575 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TK--DTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYE 422 (532)
Q Consensus 348 ~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~--~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e 422 (532)
++|+|||++|||++++ +++++++++||+|++|+. +. ++++++.+|+++
T Consensus 323 ~~l~~Ia~~tGa~~i~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~i~~~~~~---------------------- 375 (532)
T TIGR02343 323 HELELIAIATGGRIVP-----RFEELSEDKLGKAGLVREISFGTTKDRMLVIEQCKNS---------------------- 375 (532)
T ss_pred HHHHHHHHHhCCEEec-----ccccCCHhHCcccceEEEEEecCCcceEEEEECCCCC----------------------
Confidence 8899999999999999 588999999999999983 33 578899988763
Q ss_pred HHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHH
Q 009575 423 REKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKV 501 (532)
Q Consensus 423 ~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~ 501 (532)
.++||+|||+|+.+++|.||+++||+++++++++++ +|||||++||+|+++|++++.++++.+| +
T Consensus 376 -------------~~~TIllrG~t~~~l~E~er~l~DAl~~v~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~ 441 (532)
T TIGR02343 376 -------------KAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLIKNSRIVYGGGAAEISCSLAVSQEADKYSGVEQ-Y 441 (532)
T ss_pred -------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhccCCcHHH-H
Confidence 489999999999999999999999999999999996 9999999999999999999888888876 8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 502 GADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 502 ~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++++|++||+.||++||+|||+|+.+++.++
T Consensus 442 ~i~~fa~ALe~ip~~La~NaG~d~~~~l~~l 472 (532)
T TIGR02343 442 AIRAFADALEEIPMALAENSGLDPIGTLSDL 472 (532)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 9999999999999999999999999998764
No 24
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.6e-78 Score=665.52 Aligned_cols=397 Identities=20% Similarity=0.295 Sum_probs=361.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+++..|+.+|..|+++|++||||+||||||+++.|+++|||||+|||++|+++||+ |+|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~----akll~~~a~~q~~~~GDGT 90 (525)
T TIGR02344 15 RKAQLSNIQAAKAVADIIRTTLGPRAMLKMLLDPMGGIVMTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGT 90 (525)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCceEEcCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHhhhhhccCCc
Confidence 779999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc--h-hHHHHHhhhcCC------hhhHhHH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGN------NYEVGNM 222 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~~------~~~is~l 222 (532)
||+|+|+++||+++.+++++|+||..|++||+.|.+.+++.|++++++++. . .+.++|+|+++. ++.|++|
T Consensus 91 tt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l 170 (525)
T TIGR02344 91 TSVIILAGEMLSVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIPVDVNDDAAMLKLIQSCIGTKFVSRWSDLMCDL 170 (525)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999873 3 799999887653 6899999
Q ss_pred HHHHHHhhccCC-----------ceEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC
Q 009575 223 IAEAMSKVGRKG-----------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (532)
Q Consensus 223 i~eA~~~vg~~g-----------~I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~ 289 (532)
+++|+..+++++ .|++ .+|++++|| ++++|++|++++.++ +|+.+++||+|++++++|+
T Consensus 171 ~~~Ai~~v~~~~~~~~~~~d~~~~I~i~ki~Gg~~~dS-~lv~Gvvi~k~~~~~-------~m~~~~~n~kIlll~~~Le 242 (525)
T TIGR02344 171 ALDAVRTVKRDLGNGRKEIDIKRYAKVEKIPGGDIEDS-CVLKGVMINKDVTHP-------KMRRYIENPRIVLLDCPLE 242 (525)
T ss_pred HHHHHHHhhccccCCCCccChhhceEEEEecCCChHhc-CcccceEEecccCCC-------CCccccCCCCEEEEecccc
Confidence 999999998753 1344 579999998 899999999997765 4788899999999999875
Q ss_pred C-------------HHHHHHH-----------HHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCcc
Q 009575 290 N-------------ARDLINV-----------LEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (532)
Q Consensus 290 ~-------------~~el~~~-----------le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~ 345 (532)
. ++++.++ ++++.+.|++|||+++.|++.++++|.++ +|+|++ ++
T Consensus 243 ~~~~~~~~~i~i~~~~~~~~~l~~E~~~l~~~v~~i~~~~~~vIi~~k~I~dla~~~l~~~------~I~av~-----~v 311 (525)
T TIGR02344 243 YKKGESQTNVEIMKEEDWNRILQMEEEYVQLMCEDIIAVKPDLVITEKGVSDLAQHYLLKA------NISAIR-----RV 311 (525)
T ss_pred cccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHC------CceEEe-----cC
Confidence 4 4565554 44888899999999999999999998875 567655 77
Q ss_pred chhhHHHHHHHhCCeEeecCCCccccCCCCCCCce-eeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHH
Q 009575 346 KSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (532)
Q Consensus 346 ~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~-~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~ 421 (532)
++++|+|||++|||++++ ++++++++++|+ |+.|++ +++++++|++|+++
T Consensus 312 ~~~~LerIa~~tGa~ii~-----~l~~l~~~~lG~~~~~v~~~~ig~~~~~~~~g~~~~--------------------- 365 (525)
T TIGR02344 312 RKTDNNRIARACGATIVN-----RPEELRESDVGTGCGLFEVKKIGDEYFTFFTECKDP--------------------- 365 (525)
T ss_pred CHHHHHHHHHHhCCeEec-----chhhCCHhhcCCcCCEEEEEEECCeEEEEEEcCCCC---------------------
Confidence 899999999999999999 588899999999 998886 56889999988753
Q ss_pred HHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHH
Q 009575 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (532)
Q Consensus 422 e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (532)
..|||+|||+|+.+++|.||+++||+++++++++++ +|||||++||+|+.+|++++.+.++.+|
T Consensus 366 --------------~~~TIlLrG~t~~~l~E~er~l~DAl~~vk~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~- 430 (525)
T TIGR02344 366 --------------KACTILLRGASKDVLNEIERNLQDAMAVARNVLLEPKLLPGGGATEMAVSVYLAKKASKLEGVQQ- 430 (525)
T ss_pred --------------CEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHHhcCCCHHH-
Confidence 489999999999999999999999999999999996 9999999999999999998888888776
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 501 ~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+++++|++||+.||++||+|||+|+.+++.+|
T Consensus 431 ~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l 462 (525)
T TIGR02344 431 WPYRAVADALEIIPRTLAQNCGVNVIRTLTEL 462 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 89999999999999999999999999998764
No 25
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3.2e-78 Score=661.59 Aligned_cols=404 Identities=22% Similarity=0.318 Sum_probs=357.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+++..|+.++..|+++|++||||+||||||+++.|+++|||||+|||++|+++||+ |+|++++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~ia~~~kttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~~~a~~qd~~~GDGT 83 (517)
T TIGR02342 8 TDVRTSNIVAAKAVADAIRTSLGPRGMDKMIQSGNGEVIITNDGATILKQMGVIHPA----AKMLVELSKAQDIEAGDGT 83 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEEcCCCCEEEeCCHHHHHHhccccChH----HHHHHHHHHHHHHHhCCCc
Confidence 668899999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC--ch-hHHHHHhhhcCC------hhhHhHH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN------NYEVGNM 222 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~------~~~is~l 222 (532)
||+++|+++||+++.+++++|+||..|++||++|.+.+++.|+++++|++ +. .|.++|+||++. .+.|+++
T Consensus 84 tt~viLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~l 163 (517)
T TIGR02342 84 TSVVILAGALLGACETLLERGIHPTTISESFQIAADEAIKILDEMSIPVDLSDREILIKSATTSLSSKVVSQYSSLLAPL 163 (517)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCccCHHHHHHHHHHHhccccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 44 799999999863 5778999
Q ss_pred HHHHHHhhccC---Cc-----eEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC---
Q 009575 223 IAEAMSKVGRK---GV-----VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (532)
Q Consensus 223 i~eA~~~vg~~---g~-----I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~--- 289 (532)
++||+..++++ |. |.+ ..|++++|+ ++++|++|+++|.++. +||+.++||+|++++++|+
T Consensus 164 ~~~a~~~v~~~~~~~~~~~~~i~i~k~~Ggs~~ds-~li~Givl~k~~~~~~------~mpk~i~n~kI~ll~~~Le~~~ 236 (517)
T TIGR02342 164 AVDAVLKVIDPENDKNVDLNDIKVVKKLGGTIDDT-ELIEGLVFTQKASRSA------GGPTRIEKAKIGLIQFQISPPK 236 (517)
T ss_pred HHHHHHHHhccccCCccCHHHeeEEeccCCChhhc-EEEeeEEEeccccccC------CCCccccCCcEEEEecCCCCCc
Confidence 99999999762 32 333 489999999 8999999999998742 4677789999999988753
Q ss_pred ----------CH-----------HHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchh
Q 009575 290 ----------NA-----------RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (532)
Q Consensus 290 ----------~~-----------~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~ 348 (532)
++ +++.++++++++.|+|||||+++|++++++.++.+.+++ .+|+||+ +++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~lvi~~~~I~~~~l~~l~~~~l~~-~~I~av~-----~v~~~ 310 (517)
T TIGR02342 237 TDMENQVIVNDYAQMDRVLKEERKYILNIVKKIKKTGCNVLLIQKSILRDAVNDLALHFLAK-MKIMVVK-----DIERE 310 (517)
T ss_pred ccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHhh-CCceEEe-----cCCHH
Confidence 22 235678999999999999999999444444444444433 4788888 67799
Q ss_pred hHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEE-E--eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHH
Q 009575 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV-L--TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREK 425 (532)
Q Consensus 349 ~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~-i--~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~ 425 (532)
+|+|||++|||++++ +++++++++||+|+.|+ + +++.++++.+++.
T Consensus 311 ~LerIa~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~-------------------------- 359 (517)
T TIGR02342 311 EVEFICKTIGCKPIA-----SIDHFTADKLGSAELVEEVTTDGGKIIKITGIQN-------------------------- 359 (517)
T ss_pred HHHHHHHHHCCEEEc-----chhhcCcccCcCCceEEEEEECCeEEEEEEccCC--------------------------
Confidence 999999999999999 48888999999999998 3 3556777877654
Q ss_pred HHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHH
Q 009575 426 LNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 504 (532)
Q Consensus 426 l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~ 504 (532)
+++++||+|||+|+.+++|.+|+++||+++++++++++ +|||||++||+++.+|++++.+.++.+| ++++
T Consensus 360 --------~~~~~tIllrG~t~~~l~E~er~i~DAl~~v~~~~~~~~~VpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i~ 430 (517)
T TIGR02342 360 --------AGKTVTVLLRGSNKLVIDEAERSLHDALCVIRSLVKKRGLIPGGGAPEIEIAIKLSKLARTMKGVES-YCVR 430 (517)
T ss_pred --------CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECcCHHHHHHHHHHHHHHhcCCcHHH-HHHH
Confidence 24799999999999999999999999999999999986 9999999999999999999877878776 8999
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 505 IVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 505 ~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+|++||+.||++||+|||+|+.+++.+|
T Consensus 431 ~~a~al~~ip~~La~NaG~d~~~~l~~l 458 (517)
T TIGR02342 431 AFADALEVIPYTLAENAGLNPIDVVTEL 458 (517)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 9999999999999999999999998764
No 26
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.6e-78 Score=662.93 Aligned_cols=398 Identities=21% Similarity=0.335 Sum_probs=361.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+++..|+.+|..|+++|++||||+||||||++++| ++|||||+|||++|+++||+ |+|++++|++||+++||||
T Consensus 17 ~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g-~~iTnDG~TIlk~i~~~hP~----a~ll~~~a~~q~~~~GDGT 91 (522)
T TIGR02345 17 KGQLISNINACVAIAEILKTTLGPRGMDKLIVGKNG-ATVSNDGATILKLLDIVHPA----AKTLVDIAKSQDSEVGDGT 91 (522)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCceEEECCCC-cEEeCcHHHHHHHhcccChH----HHHHHHHHHHHHHHhCCCc
Confidence 789999999999999999999999999999999999 99999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC-----ch-hHHHHHhhhcC------ChhhH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAG------NNYEV 219 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~-----~~-~l~~va~ts~~------~~~~i 219 (532)
||+|||+++||+++.+++++|+||..|++||+.|.+.+++.|+++++|++ +. .|.++|+|+++ ++++|
T Consensus 92 Tt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~l 171 (522)
T TIGR02345 92 TSVVILAGELLKEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVTIDEVKGEQREVLEKCAATALNSKLIAHEKEFF 171 (522)
T ss_pred hhHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCcccccHHHHHHHHHHHhccccccchHHHH
Confidence 99999999999999999999999999999999999999999999999997 33 79999999977 67999
Q ss_pred hHHHHHHHHhhccC-------CceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC---
Q 009575 220 GNMIAEAMSKVGRK-------GVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (532)
Q Consensus 220 s~li~eA~~~vg~~-------g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~--- 289 (532)
++++++|+.+++++ ++++ .+|++++|| ++++|++|+++|.+|+|.+ |+.+++||+|+++|++|+
T Consensus 172 ~~l~~~A~~~v~~~~~~~~~I~i~k-i~Ggs~~ds-~~v~Giv~~~~~~~~~~~~----~~~~~~n~kIll~~~~Le~~~ 245 (522)
T TIGR02345 172 SKMIVDAVLQLDIDDLDLKLIGVKK-VQGGSLQDS-VLVNGVAFKKTFSYAGFEQ----QPKKFANPKILLLNVELELKA 245 (522)
T ss_pred HHHHHHHHHHHhhccCChhHheEEe-ecCCCHHhc-ceecceEEecccCcccccc----CCceeccceEEEEecCcccCc
Confidence 99999999999875 2344 489999999 7999999999999998754 667899999999999863
Q ss_pred ----------CHHH-----------HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchh
Q 009575 290 ----------NARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (532)
Q Consensus 290 ----------~~~e-----------l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~ 348 (532)
++++ +.+.++.+++.|+++|+++++|++.++++|..+ +|++++ ++.++
T Consensus 246 ~~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~i~d~~~~~L~~~------~I~~~~-----~v~~~ 314 (522)
T TIGR02345 246 EKDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLPIGDLATQYFADH------NIFCAG-----RVSDE 314 (522)
T ss_pred cccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCccHHHHHHHHHC------CcEEEe-----cCCHH
Confidence 3333 245577788899999999999999999999886 445554 66789
Q ss_pred hHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHH
Q 009575 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREK 425 (532)
Q Consensus 349 ~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~ 425 (532)
++++|+++||+++++ +++++++++||+|+.++. +++++++|.||+++
T Consensus 315 dl~ria~~tga~ii~-----~~~~l~~~~LG~~~~ie~~~~~~~r~~~~~g~~~~------------------------- 364 (522)
T TIGR02345 315 DLKRVVKACGGSIQS-----TTSDLEADVLGTCALFEERQIGSERYNYFTGCPHA------------------------- 364 (522)
T ss_pred HHHHHHHHhCCeEEc-----chhhCChhhccCCceEEEEEECCeEEEEEEcCCCC-------------------------
Confidence 999999999999999 488888999999999985 46789999887653
Q ss_pred HHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHH
Q 009575 426 LNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 504 (532)
Q Consensus 426 l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~ 504 (532)
.+|||+|||+|+.+++|++|+++||+++++++++++ +|||||++||+++.+|++++.+.++.+| ++++
T Consensus 365 ----------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~~-~~i~ 433 (522)
T TIGR02345 365 ----------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRALKARKIVAGGGAIEMELSKILREHSKKIDGKQQ-LIIE 433 (522)
T ss_pred ----------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHHhhCCCHHH-HHHH
Confidence 589999999999999999999999999999999985 9999999999999999998777778776 8999
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 505 IVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 505 ~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+|++||+.||++||+|||+|+.+++.+|
T Consensus 434 ~~a~aL~~ip~~La~NaG~d~~~vl~~l 461 (522)
T TIGR02345 434 AFAKALEIIPRSLCENAGFDSIEILNKL 461 (522)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 9999999999999999999999998764
No 27
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.6e-77 Score=656.00 Aligned_cols=396 Identities=22% Similarity=0.343 Sum_probs=358.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecC--CCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK--YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~--~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GD 149 (532)
.++++.|+.|+..|+++|++||||+||||||+++ +|+++|||||+||+++|+++||. |+|++++|++||+++||
T Consensus 12 ~~a~~~n~~~~~~i~~~v~tslGP~G~~Kmi~~~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~qd~~~GD 87 (517)
T cd03336 12 ETARLSSFVGAIAIGDLVKTTLGPKGMDKILQSVGRSGGVTVTNDGATILKSIGVDNPA----AKVLVDISKVQDDEVGD 87 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEeecCCCCCCeEEeccHHHHHHHccCcChH----HHHHHHHHHHHHhHhCC
Confidence 7899999999999999999999999999999998 59999999999999999999997 99999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc-----h-hHHHHHhhhcC------Chh
Q 009575 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG------NNY 217 (532)
Q Consensus 150 GTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~------~~~ 217 (532)
||||+|||+++||+++.+++++|+||..|++||++|.+.+++.|+++++|+++ . .|.++|+|+++ +++
T Consensus 88 GTTtvvvLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~t~lssk~~~~~~~ 167 (517)
T cd03336 88 GTTSVTVLAAELLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVDHSSDEEAFREDLLNIARTTLSSKILTQDKE 167 (517)
T ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcccccchhHHHHHHHHHhhccccccchhHH
Confidence 99999999999999999999999999999999999999999999999999841 2 79999997754 468
Q ss_pred hHhHHHHHHHHhhccC---Cce--EEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC---
Q 009575 218 EVGNMIAEAMSKVGRK---GVV--TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (532)
Q Consensus 218 ~is~li~eA~~~vg~~---g~I--~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~--- 289 (532)
+|++|+++|+.++++. ..| ...+|++++|+ ++++|+++++++.+ .|+++++||+|+++|++|+
T Consensus 168 ~l~~l~~~A~~~v~~~~~~~~i~i~ki~G~s~~ds-~l~~G~v~~~~~~~--------~~~~~~~n~kIli~~~~le~~~ 238 (517)
T cd03336 168 HFAELAVDAVLRLKGSGNLDAIQIIKKLGGSLKDS-YLDEGFLLDKKIGV--------NQPKRIENAKILIANTPMDTDK 238 (517)
T ss_pred HHHHHHHHHHHHhhccCCccceeEEEccCCCccce-EEEeeEEEecccCC--------CCCCeeccccEEEEecCCCccc
Confidence 9999999999999642 223 33589999999 89999999998643 2577899999999999764
Q ss_pred -----------CHHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccch
Q 009575 290 -----------NARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (532)
Q Consensus 290 -----------~~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k 347 (532)
+++++ .+.++.+++.|++++++++.|++.++++|.++ +|+||+.|+ +
T Consensus 239 ~~~~~~~~~~~~~~~~~~l~~~E~~~~~~~v~~I~~~gv~~v~~~~~I~~~~~~~l~~~------~I~av~~v~-----~ 307 (517)
T cd03336 239 IKIFGAKVRVDSTAKVAEIEEAEKEKMKNKVEKILKHGINCFINRQLIYNYPEQLFADA------GIMAIEHAD-----F 307 (517)
T ss_pred ccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC------CcEEEecCC-----H
Confidence 45544 33578889999999999999999999999876 578999776 5
Q ss_pred hhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHH
Q 009575 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (532)
Q Consensus 348 ~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~ 424 (532)
++|+|||++|||++++ +++++++++||+|+.|+. +++++++|.+|+.
T Consensus 308 ~~L~rIa~~tGa~ii~-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~------------------------- 357 (517)
T cd03336 308 DGVERLALVTGGEIAS-----TFDHPELVKLGTCKLIEEIMIGEDKLIRFSGVAA------------------------- 357 (517)
T ss_pred HHHHHHHHHhCCEEec-----ccCCCCcccccccceEEEEEECCeEEEEEEccCC-------------------------
Confidence 6799999999999999 588899999999999974 5778999998865
Q ss_pred HHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHH
Q 009575 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (532)
Q Consensus 425 ~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (532)
++.|||+|||+|+.+++|.+|+++||++++++++++| +|||||++||+|+..|++++++.++.+| +++
T Consensus 358 ----------~~~~TI~lrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i 426 (517)
T cd03336 358 ----------GEACTIVLRGASQQILDEAERSLHDALCVLAQTVKDTRVVLGGGCSEMLMAKAVEELAKKTPGKKS-LAI 426 (517)
T ss_pred ----------CceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhhCCCHHH-HHH
Confidence 3689999999999999999999999999999999998 9999999999999999999888888777 899
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 504 DIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 504 ~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++|++||+.||++||+|||+|+.+++.+|
T Consensus 427 ~~~a~ALe~ip~~La~NaG~d~~~~l~~l 455 (517)
T cd03336 427 EAFAKALRQLPTIIADNAGYDSAELVAQL 455 (517)
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 99999999999999999999999998764
No 28
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=2.4e-77 Score=656.61 Aligned_cols=396 Identities=21% Similarity=0.352 Sum_probs=359.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecC-----CCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK-----YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDL 146 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~-----~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~ 146 (532)
++++..|+.|+..|+++|++||||+||||||+++ +|+++|||||+||+|+|+++||. |+|++++|++||++
T Consensus 21 ~~a~~~ni~a~~~i~~~vkttlGP~G~~Kmi~~~~~~~~~G~~~iTnDG~TIlk~i~~~hP~----akll~~~a~~qd~~ 96 (533)
T PTZ00212 21 ETARLQSFVGAIAVADLVKTTLGPKGMDKILQPMSEGPRSGNVTVTNDGATILKSVWLDNPA----AKILVDISKTQDEE 96 (533)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCccceEeecCCCcccCCCEEEeccHHHHHHhccCcCHH----HHHHHHHHHhhhhh
Confidence 7899999999999999999999999999999998 69999999999999999999997 99999999999999
Q ss_pred cCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc-----h-hHHHHHhhhcCC-----
Q 009575 147 AGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAGN----- 215 (532)
Q Consensus 147 ~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~~----- 215 (532)
+||||||+|+|+++||+++.+++++|+||..|++||++|++.+++.|+++++|+++ . +|.++|+|+++.
T Consensus 97 ~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~t~l~sk~~~~ 176 (533)
T PTZ00212 97 VGDGTTSVVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFDHGSDEEKFKEDLLNIARTTLSSKLLTV 176 (533)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCccchhhHHHHHHHHHHHhcccccch
Confidence 99999999999999999999999999999999999999999999999999999864 3 799999987653
Q ss_pred -hhhHhHHHHHHHHhhccC---Cc--eEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccC-
Q 009575 216 -NYEVGNMIAEAMSKVGRK---GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI- 288 (532)
Q Consensus 216 -~~~is~li~eA~~~vg~~---g~--I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I- 288 (532)
.+.|++++++|+..+.+. .. |...+|++++|| ++++|+++++++.+ .|+++++||+|+++|++|
T Consensus 177 ~~~~l~~i~~~av~~i~~~~~~~~I~i~ki~Ggsi~ds-~lv~G~v~~~~~~~--------~~~~~i~n~kIll~~~~Le 247 (533)
T PTZ00212 177 EKDHFAKLAVDAVLRLKGSGNLDYIQIIKKPGGTLRDS-YLEDGFILEKKIGV--------GQPKRLENCKILVANTPMD 247 (533)
T ss_pred hHHHHHHHHHHHHHHHhccCCccceEEEEecCcCcccc-EEEEeEEEecccCC--------CCCccccCCcEEEEeCCCC
Confidence 588999999999998542 22 344699999999 89999999998643 267889999999999986
Q ss_pred -------------CCHHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCc
Q 009575 289 -------------TNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGE 344 (532)
Q Consensus 289 -------------~~~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~ 344 (532)
++++++ .+.++.+++.|++++++++.|++.++++|.++ +|+||+ +
T Consensus 248 ~~k~~~~~~~~~i~~~~~~~~l~~~E~~~i~~~v~~Ii~~gv~vvv~~~~I~d~a~~~L~~~------~I~avr-----~ 316 (533)
T PTZ00212 248 TDKIKIYGAKVKVDSMEKVAEIEAAEKEKMKNKVDKILAHGCNVFINRQLIYNYPEQLFAEA------GIMAIE-----H 316 (533)
T ss_pred CCcccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC------CCEEEe-----c
Confidence 555544 23577888999999999999999999999887 568887 4
Q ss_pred cchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHH
Q 009575 345 RKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (532)
Q Consensus 345 ~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~ 421 (532)
+++++++|||++|||++++ +++++++++||+|++|+ ++++++++|.+|..
T Consensus 317 v~~~~l~rIa~~tGa~iis-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~---------------------- 369 (533)
T PTZ00212 317 ADFDGMERLAAALGAEIVS-----TFDTPEKVKLGHCDLIEEIMIGEDKLIRFSGCAK---------------------- 369 (533)
T ss_pred CCHHHHHHHHHHhCCEEee-----cCCCCCHHHccCCceEEEEEECCeEEEEEEccCC----------------------
Confidence 5578999999999999999 58889999999999998 67889999988754
Q ss_pred HHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHH
Q 009575 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (532)
Q Consensus 422 e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (532)
+++|||+|||+|+.+++|+||+++||++++++++++| +||||||+|++++.+|++++++..+.+|
T Consensus 370 -------------~~~~TI~lrG~t~~~l~E~er~i~DAl~vv~~~i~~~~vVpGGGa~e~~ls~~L~~~~~~~~~~~~- 435 (533)
T PTZ00212 370 -------------GEACTIVLRGASTHILDEAERSLHDALCVLSQTVKDTRVVLGGGCSEMLMANAVEELAKKVEGKKS- 435 (533)
T ss_pred -------------CCEEEEEEECCChhHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhhCCCHHH-
Confidence 4699999999999999999999999999999999998 9999999999999999999887878777
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 501 ~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+++++|++||+.||++||+|||+|+.+++.+|
T Consensus 436 ~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l 467 (533)
T PTZ00212 436 LAIEAFAKALRQIPTIIADNGGYDSAELVSKL 467 (533)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 89999999999999999999999999998764
No 29
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.8e-77 Score=656.98 Aligned_cols=396 Identities=23% Similarity=0.322 Sum_probs=355.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+++..|+.+|..|+++|++||||+||||||+++.|+++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 17 ~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~e~a~sqd~~~GDGT 92 (531)
T TIGR02346 17 EEAVIKNIEACKELSNITRTSLGPNGMNKMVINHLDKLFVTNDAATILRELEVQHPA----AKLLVMASEMQENEIGDGT 92 (531)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCcCCeEEEcCCCCEEEECcHHHHHHhccccCHH----HHHHHHHHHHHhhhhCCCh
Confidence 458999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhccc-ccCc---h-hHHHHHhhhcC-----ChhhHhH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSK-EVED---S-ELADVAAVSAG-----NNYEVGN 221 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~-~v~~---~-~l~~va~ts~~-----~~~~is~ 221 (532)
||+|||+++||+++.+++++|+||..|++||+.|++.+++.|+++++ ++++ . .+.++++++++ ++++|++
T Consensus 93 Tt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~tsl~sK~~~~~~~ls~ 172 (531)
T TIGR02346 93 NLVIVLAGELLDKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVWEVEDVRNKKELIKALKASISSKQYGNEDFLAQ 172 (531)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhccccCchHHHHHH
Confidence 99999999999999999999999999999999999999999999986 7744 3 79999888774 4899999
Q ss_pred HHHHHHHhhccCC--c-----eEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccC----
Q 009575 222 MIAEAMSKVGRKG--V-----VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI---- 288 (532)
Q Consensus 222 li~eA~~~vg~~g--~-----I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I---- 288 (532)
|+++|+.++++++ . |.+ .+|++++|+ ++++|++|++++. .+++.++||||+++++++
T Consensus 173 l~~~Ai~~v~~~~~~~~~~~~I~i~ki~G~s~~ds-~li~Gi~~~~~~~---------~~~k~i~n~kI~l~~~~l~~~~ 242 (531)
T TIGR02346 173 LVAKACSTVMPKNPENFNVDNIRVSKIMGGSISNS-EVLKGMVFNREAE---------GSVKRVKNAKVAVFSCPLDTAT 242 (531)
T ss_pred HHHHHHHHHhhcCCCcCChhHeeEEEecCCChhhc-eeEeeeEEeccCC---------CCceeccCCCEEEEecCcCCCc
Confidence 9999999998764 3 222 489999999 8999999999832 145678899999998874
Q ss_pred ---------CCHH-----------HHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchh
Q 009575 289 ---------TNAR-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (532)
Q Consensus 289 ---------~~~~-----------el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~ 348 (532)
++++ ++.++++++++.|+||||++++|++.++++|..+ +|+||++|++ .
T Consensus 243 ~~~~~~~~~~~~~~l~~~~~~e~~~i~~~l~~i~~~g~~lvi~~~~I~d~~~~~l~~~------~I~av~~~~~-----~ 311 (531)
T TIGR02346 243 TETKGTVLIHNAEELLNYSKGEENQIEAYIKAIADSGVNVIVTGGSVGDMALHYCEKY------NIMVLKIPSK-----F 311 (531)
T ss_pred ccCceEEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCCcCHHHHHHHHHC------CcEEEecCCH-----H
Confidence 3333 3567799999999999999999999999988754 6899998874 5
Q ss_pred hHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHH
Q 009575 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREK 425 (532)
Q Consensus 349 ~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~ 425 (532)
+|+|||.+|||++++ +++++++++||+|++|++ +++.+.++.++..
T Consensus 312 ~l~~Ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~~~~~-------------------------- 360 (531)
T TIGR02346 312 ELRRLCKTVGATPLA-----RLGAPQPEEIGYVDSVYVSEIGGQKVTVFKQENG-------------------------- 360 (531)
T ss_pred HHHHHHHHHCCEEec-----ccccCCHhHccccceEEEEEECCEEEEEEEccCC--------------------------
Confidence 889999999999998 488888999999999985 4567888887542
Q ss_pred HHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHH
Q 009575 426 LNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 504 (532)
Q Consensus 426 l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~ 504 (532)
.++++||+|||+|+.+++|++|+++||++++++++++| +||||||+||+|+.+|++++.+.++.+| ++++
T Consensus 361 --------~~~~~tI~lrG~t~~~l~E~er~i~DAl~~~k~ai~~~~vVpGGG~~e~~ls~~L~~~~~~~~~~~~-~~~~ 431 (531)
T TIGR02346 361 --------DSKISTIILRGSTKNLLDDIERAIDDGVNVIKALVKDNRFLPGAGATEIELALRLKKYANKLPGLDQ-YAIK 431 (531)
T ss_pred --------CCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHHH-HHHH
Confidence 25799999999999999999999999999999999999 9999999999999999999877778776 8999
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 505 IVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 505 ~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+|++||+.||++|++|||+|+.+++.+|
T Consensus 432 ~~a~aL~~ip~~L~~NaG~d~~~~~~~l 459 (531)
T TIGR02346 432 KFAEAFEIIPRTLAENAGLNPNEVIPKL 459 (531)
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 9999999999999999999999998764
No 30
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.3e-77 Score=649.41 Aligned_cols=380 Identities=21% Similarity=0.321 Sum_probs=349.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+++..|+.++..|++++++||||+||+|||+++.|+++|||||+||+++|+++||. |+|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~~~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~~~~GDGT 90 (480)
T cd03337 15 RKAQLGNIQAAKTVADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGT 90 (480)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCcCceEeEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHhHHHHhCCCc
Confidence 779999999999999999999999999999999999999999999999999999997 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC--ch-hHHHHHhhhcC------ChhhHhHH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAG------NNYEVGNM 222 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~------~~~~is~l 222 (532)
||+++|+++||+++.+++++|+||..|++||+.|.+.+++.|++++++++ +. .+.++++|+++ +++.|+++
T Consensus 91 tt~vvL~~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~~~ls~l 170 (480)
T cd03337 91 TSVIILAGEILAVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIPVDVNDRAQMLKIIKSCIGTKFVSRWSDLMCNL 170 (480)
T ss_pred chhHhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHhccCcchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 44 89999999987 57899999
Q ss_pred HHHHHHhhccC--C---------ceEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC
Q 009575 223 IAEAMSKVGRK--G---------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (532)
Q Consensus 223 i~eA~~~vg~~--g---------~I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~ 289 (532)
+++|+..++++ + .|++ .+|++++|| ++++|++|++++.+| +|+.+++||+|++++++|+
T Consensus 171 v~~Ai~~v~~~~~~~~~~id~~~~I~i~ki~Ggs~~ds-~li~Gvvi~k~~~~~-------~m~~~~~n~kIlll~~~Le 242 (480)
T cd03337 171 ALDAVKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDS-RVLDGVMLNKDVTHP-------KMRRRIENPRIVLLDCPLE 242 (480)
T ss_pred HHHHHHhhccccCCCCCcCChhhceEEEEecCCCHHhc-ccccceEEeccCCCC-------CCCcEecCCCEEEEecCcc
Confidence 99999999864 3 2333 579999998 899999999999886 4888999999999999987
Q ss_pred CHHHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCcc
Q 009575 290 NARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLA 369 (532)
Q Consensus 290 ~~~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~ 369 (532)
. |||++++|+++++++|.+| +|++|+ ++++++|+|||++|||++++ +
T Consensus 243 ~-----------------lvi~~k~I~d~al~~L~~~------~I~~v~-----~v~~~~L~rIa~~tGa~ii~-----~ 289 (480)
T cd03337 243 Y-----------------LVITEKGVSDLAQHYLVKA------GITALR-----RVRKTDNNRIARACGATIVN-----R 289 (480)
T ss_pred e-----------------EEEeCCCccHHHHHHHHHC------CcEEEE-----eCCHHHHHHHHHHHCCEEec-----c
Confidence 6 9999999999999999987 568887 56789999999999999999 4
Q ss_pred ccCCCCCCCcee-eEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCC
Q 009575 370 LDKVGKEVLGNA-SKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQ 445 (532)
Q Consensus 370 l~~~~~~~lG~~-~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~ 445 (532)
++++++++||+| +.++. ++++++++++|+++ +.+||+|||+
T Consensus 290 ~~~l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~-----------------------------------~~~TIllrG~ 334 (480)
T cd03337 290 PEELTESDVGTGAGLFEVKKIGDEYFTFITECKDP-----------------------------------KACTILLRGA 334 (480)
T ss_pred hhhCCHHHcCCcccEEEEEEeCCeEEEEEEcCCCC-----------------------------------CEEEEEEECC
Confidence 888889999995 44442 46788999988753 5899999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 009575 446 TETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVN 524 (532)
Q Consensus 446 te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d 524 (532)
|+.+++|.||+++||+++++++++++ +|||||++||+++.+|++++.+.++.+| +++++|++||+.||++||+|||+|
T Consensus 335 t~~~l~e~er~l~DAl~v~~~~~~~~~~vpGGGa~E~~ls~~l~~~~~~~~~~~~-~~~~~~a~al~~ip~~La~NaG~d 413 (480)
T cd03337 335 SKDVLNEVERNLQDAMAVARNIILNPKLVPGGGATEMAVSHALSEKAKSIEGVEQ-WPYKAVASALEVIPRTLAQNCGAN 413 (480)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999996 9999999999999999998888888877 899999999999999999999999
Q ss_pred hhhhhccC
Q 009575 525 GSVVSEKV 532 (532)
Q Consensus 525 ~~~vi~kl 532 (532)
+.+++.+|
T Consensus 414 ~~~~l~~l 421 (480)
T cd03337 414 VIRTLTEL 421 (480)
T ss_pred HHHHHHHH
Confidence 99998764
No 31
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=3.8e-76 Score=638.16 Aligned_cols=385 Identities=38% Similarity=0.553 Sum_probs=354.7
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccc
Q 009575 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (532)
Q Consensus 65 ~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d 144 (532)
+..++ ++++..+++|+..|++++++||||+||+|||+++.|+++|||||+||+|+|+++||. |+|+++++++||
T Consensus 2 ~~~~~--~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~hp~----a~ll~~~~~~~~ 75 (464)
T cd00309 2 EREFG--EEARLSNINAAKALADAVKTTLGPKGMDKMLVDSLGDPTITNDGATILKEIEVEHPA----AKLLVEVAKSQD 75 (464)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHhcccCCCcCcEEEEcCCCCeEEEccHHHHHHhccCcCHH----HHHHHHHHHHHH
Confidence 45666 899999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccc--cCch-hHHHHHhhhcC------C
Q 009575 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKE--VEDS-ELADVAAVSAG------N 215 (532)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~--v~~~-~l~~va~ts~~------~ 215 (532)
+++||||||+++|+++|++++.+++++|+||..|++||+.|++.+++.|++++++ +.+. ++.++|+|+++ +
T Consensus 76 ~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~ 155 (464)
T cd00309 76 DEVGDGTTTVVVLAGELLKEAEKLLAAGIHPTEIIRGYEKAVEKALEILKEIAVPIDVEDREELLKVATTSLNSKLVSGG 155 (464)
T ss_pred hHhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCccCCCCHHHHHHHhHhcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999 4444 89999999998 7
Q ss_pred hhhHhHHHHHHHHhhcc------CCceEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc
Q 009575 216 NYEVGNMIAEAMSKVGR------KGVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK 287 (532)
Q Consensus 216 ~~~is~li~eA~~~vg~------~g~I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~ 287 (532)
++.|++++++|+.++++ .+.|++ .+|++++|| ++++|++|+++|.+|+| +++++||+|++++++
T Consensus 156 ~~~l~~l~~~Ai~~v~~~~~~~~~~~I~i~k~~gg~~~ds-~li~Gi~~~~~~~~~~m-------~~~~~n~~Ili~~~~ 227 (464)
T cd00309 156 DDFLGELVVDAVLKVGKENGDVDLGVIRVEKKKGGSLEDS-ELVVGMVFDKGYLSPYM-------PKRLENAKILLLDCK 227 (464)
T ss_pred hHHHHHHHHHHHHHhccccCccccceEEEEecCCCCcccc-eeeeeEEEecCCCCCCC-------ceeecCceEEEEecC
Confidence 99999999999999998 566666 489999999 89999999999999974 678999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCC
Q 009575 288 ITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVG 367 (532)
Q Consensus 288 I~~~~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~ 367 (532)
|+. |||+.++|+++++++|.++ +|++|+. +++++|+|||++||++++++
T Consensus 228 Le~-----------------lIi~~~~I~~~al~~L~~~------~I~~v~~-----~~~~~L~~Ia~~tGa~ii~~--- 276 (464)
T cd00309 228 LEY-----------------VVIAEKGIDDEALHYLAKL------GIMAVRR-----VRKEDLERIAKATGATIVSR--- 276 (464)
T ss_pred cce-----------------EEecCCCcCHHHHHHHHHC------CeEEEEe-----CCHHHHHHHHHHhCCEEecc---
Confidence 887 7787778999999999875 6788884 56899999999999999984
Q ss_pred ccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCC
Q 009575 368 LALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGA 444 (532)
Q Consensus 368 ~~l~~~~~~~lG~~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G 444 (532)
+++++++.+|+|+.|++ +++++++|.++.. +.+|||+|||
T Consensus 277 --~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~-----------------------------------~~~~TIllrG 319 (464)
T cd00309 277 --LEDLTPEDLGTAGLVEETKIGDEKYTFIEGCKG-----------------------------------GKVATILLRG 319 (464)
T ss_pred --cccCCcccCccccEEEEEEEcCeeEEEEEecCC-----------------------------------CCEEEEEEeC
Confidence 78888999999999986 4567888887654 3689999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 009575 445 QTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGV 523 (532)
Q Consensus 445 ~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~ 523 (532)
+|+.+++|+||+++||+++++++++++ +|||||++||+++++|++++.+.++.+| +++++|++||+.||++|++|||+
T Consensus 320 ~t~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGGa~E~~ls~~L~~~~~~~~~~~~-~~~~~~a~aL~~ip~~L~~NaG~ 398 (464)
T cd00309 320 ATEVELDEAERSLHDALCAVRAAVEDGGIVPGGGAAEIELSKALEELAKTLPGKEQ-LGIEAFADALEVIPRTLAENAGL 398 (464)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCcHHHHHHHHHHHHHhcccchHHH-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999996 9999999999999999999877777766 89999999999999999999999
Q ss_pred ChhhhhccC
Q 009575 524 NGSVVSEKV 532 (532)
Q Consensus 524 d~~~vi~kl 532 (532)
|+.+++.+|
T Consensus 399 d~~~~~~~l 407 (464)
T cd00309 399 DPIEVVTKL 407 (464)
T ss_pred CHHHHHHHH
Confidence 999998764
No 32
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=3.3e-76 Score=639.09 Aligned_cols=383 Identities=22% Similarity=0.294 Sum_probs=347.4
Q ss_pred cHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCcc
Q 009575 71 DGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDG 150 (532)
Q Consensus 71 ~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDG 150 (532)
.++++..|+.++..|+++|++||||+||||||++++|+++|||||+||+++|+++||+ |+|++++|++||+++|||
T Consensus 6 ~~~~~~~ni~a~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~~~~~~GDG 81 (472)
T cd03341 6 LEEAVLRNIEACKELSQITRTSYGPNGMNKMVINHLEKLFVTSDAATILRELEVQHPA----AKLLVMASQMQEEEIGDG 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEEcCCCCEEEeCcHHHHHHhccccCHH----HHHHHHHHHHHhhhhCCC
Confidence 3778999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccc-cCc---h-hHHHHHhhhc-----CChhhHh
Q 009575 151 TTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKE-VED---S-ELADVAAVSA-----GNNYEVG 220 (532)
Q Consensus 151 TTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~-v~~---~-~l~~va~ts~-----~~~~~is 220 (532)
|||+++|+++||+++.+++++|+||..|++||+.|.+.+++.|++++++ +++ . .+.+++++++ +++++|+
T Consensus 82 TTt~vvL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l~ 161 (472)
T cd03341 82 TNLVVVLAGELLEKAEELLRMGLHPSEIIEGYEKALKKALEILEELVVYKIEDLRNKEEVSKALKTAIASKQYGNEDFLS 161 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHhcccccchHHHHH
Confidence 9999999999999999999999999999999999999999999999876 543 2 5778888774 4578999
Q ss_pred HHHHHHHHhhccC--Cce-------EEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCH
Q 009575 221 NMIAEAMSKVGRK--GVV-------TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA 291 (532)
Q Consensus 221 ~li~eA~~~vg~~--g~I-------~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~ 291 (532)
+|+++|+.+++++ |.+ ...+|++++|| ++++|++|++.+. .++++++||+|++++++|+.
T Consensus 162 ~l~~~a~~~~~~~~~~~~~~~~i~i~ki~Gg~~~ds-~lv~Giv~~~~~~---------~~~~~~~n~~Ili~~~~Le~- 230 (472)
T cd03341 162 PLVAEACISVLPENIGNFNVDNIRVVKILGGSLEDS-KVVRGMVFKREPE---------GSVKRVKKAKVAVFSCPFDI- 230 (472)
T ss_pred HHHHHHHHHHhhccCCcCChhHeEEEEecCCCcccc-eEEeeEEEccccC---------CCceeccCCcEEEEeccccC-
Confidence 9999999999875 432 23489999999 9999999987531 24578999999999999887
Q ss_pred HHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCcccc
Q 009575 292 RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALD 371 (532)
Q Consensus 292 ~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~ 371 (532)
|+||||++++|+++++++|.++ +|+||++|+ +++|+|||++|||+++++ ++
T Consensus 231 -------------g~~lvi~~~~I~d~al~~l~~~------~I~av~~~~-----~~~Le~Ia~~tGa~ii~~-----~~ 281 (472)
T cd03341 231 -------------GVNVIVAGGSVGDLALHYCNKY------GIMVIKINS-----KFELRRLCRTVGATPLPR-----LG 281 (472)
T ss_pred -------------CCeEEEECCCCCHHHHHHHHHC------CeEEEEeCC-----HHHHHHHHHHhCCEEecc-----cc
Confidence 8999999999999999997653 789999877 788999999999999984 78
Q ss_pred CCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHH
Q 009575 372 KVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTET 448 (532)
Q Consensus 372 ~~~~~~lG~~~~v~i~---~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~ 448 (532)
+++++++|+|++|++. ++++++|.++++. ++++||+|||+|+.
T Consensus 282 ~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------------------~~~~TI~lrG~t~~ 327 (472)
T cd03341 282 APTPEEIGYCDSVYVEEIGDTKVVVFRQNKED----------------------------------SKIATIVLRGATQN 327 (472)
T ss_pred cCCHhHCCCceEEEEEEECCeeEEEEEccCCC----------------------------------CCeEEEEEECCCHH
Confidence 8889999999999875 4889999887541 46899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhh
Q 009575 449 ELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSV 527 (532)
Q Consensus 449 ~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~ 527 (532)
+++|+||+++||++++++++++| +|||||++||+++.+|++++.+.++.++ +++++|++||+.||++|++|||+||.+
T Consensus 328 ~l~E~er~i~DAl~~~~~ai~~~~vVpGGG~~e~~ls~~l~~~~~~~~~~~~-~~~~~~a~al~~ip~~L~~NaG~d~~~ 406 (472)
T cd03341 328 ILDDVERAIDDGVNVFKSLTKDGRFVPGAGATEIELAKKLKEYGEKTPGLEQ-YAIKKFAEAFEVVPRTLAENAGLDATE 406 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEeCcCHHHHHHHHHHHHHhhccCCHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHH
Confidence 99999999999999999999999 9999999999999999998877777766 899999999999999999999999999
Q ss_pred hhccC
Q 009575 528 VSEKV 532 (532)
Q Consensus 528 vi~kl 532 (532)
++.+|
T Consensus 407 ~~~~l 411 (472)
T cd03341 407 VLSEL 411 (472)
T ss_pred HHHHH
Confidence 98764
No 33
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.3e-75 Score=640.74 Aligned_cols=396 Identities=23% Similarity=0.348 Sum_probs=356.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCC--CCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKY--GAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~--g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GD 149 (532)
.+++..|+.|+..|+++|++||||+||||||+++. |+++|||||+|||++|+++||. |+|++++|++||+++||
T Consensus 13 ~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~~~G~~~iTnDG~tIlk~l~i~hP~----akll~~~a~~qd~~~GD 88 (519)
T TIGR02341 13 ENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSGSSESGIMVTNDGATILKSIGVDNPA----AKVLVDMSKVQDDEVGD 88 (519)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEEeccCCCCCeEEeccHHHHHHHccCcChH----HHHHHHHHHHhHhhhCC
Confidence 77999999999999999999999999999999985 9999999999999999999997 99999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc-----h-hHHHHHhhhcCC------hh
Q 009575 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAGN------NY 217 (532)
Q Consensus 150 GTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~~------~~ 217 (532)
||||+|||+++||+++.+++++|+||..|++||+.|.+.+++.|+++++|+++ . +|.++|+|+++. .+
T Consensus 89 GTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~L~~ia~t~l~ski~~~~~~ 168 (519)
T TIGR02341 89 GTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSIDNGSDKTKFRDDLLNIARTTLSSKILSQHKD 168 (519)
T ss_pred chhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHHHHHHHhhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999853 2 789999988763 47
Q ss_pred hHhHHHHHHHHhhccC---CceEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCC--
Q 009575 218 EVGNMIAEAMSKVGRK---GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITN-- 290 (532)
Q Consensus 218 ~is~li~eA~~~vg~~---g~I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~-- 290 (532)
.|++++++|+..+.+. ..|.+ .+|++++|+ ++++|+++++++.+ .|+++++||+|+++|++|+.
T Consensus 169 ~~s~l~~~av~~i~~~~~~~~i~i~k~~G~s~~~s-~l~~G~v~~~~~~~--------~~~~~~~n~~Ili~~~~Le~~~ 239 (519)
T TIGR02341 169 HFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSLNDS-YLDEGFLLEKKIGV--------NQPKRIENAKILIANTPMDTDK 239 (519)
T ss_pred HHHHHHHHHHHHhccCCChhheEEEEccCCCcccc-eEEeeEEEeccCCC--------CCceeeccccEEEEecCCCCCc
Confidence 8999999999998432 23554 389999999 89999999998543 25778999999999998753
Q ss_pred ------------HHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccch
Q 009575 291 ------------ARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (532)
Q Consensus 291 ------------~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k 347 (532)
++++ .++++.+++.|++++++++.|++.++++|..+ +|++|+.|+ +
T Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~I~~~g~~~v~~~~~I~~~~~~~l~~~------~I~~v~~~~-----~ 308 (519)
T TIGR02341 240 VKVFGSRVRVDSTAKVAELEAAEKEKMKEKVEKILKHNINCFINRQLIYNYPEQLFADA------GVMAIEHAD-----F 308 (519)
T ss_pred cccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCcCCHHHHHHHHHC------CcEEEecCC-----H
Confidence 3333 23477889999999999999999999998776 678998776 5
Q ss_pred hhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHH
Q 009575 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (532)
Q Consensus 348 ~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~ 424 (532)
.+|+|||++|||++++ +++++++++||+|+.|+. +++++++|.+|++
T Consensus 309 ~~l~~ia~~tGa~ii~-----~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~------------------------- 358 (519)
T TIGR02341 309 EGIERLALVTGGEIVS-----TFDHPELVKLGSCDLIEEIMIGEDKLLKFSGVKL------------------------- 358 (519)
T ss_pred HHHHHHHHHhCCEEec-----ccccCCccccccCceEEEEEECCEEEEEEEcCCC-------------------------
Confidence 6899999999999999 588889999999999974 5778999998865
Q ss_pred HHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHH
Q 009575 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (532)
Q Consensus 425 ~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (532)
+++|||+|||+|+.+++|.+|+++||+++++++++++ +||||||+||+|++.|++++++.++.+| +++
T Consensus 359 ----------~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i 427 (519)
T TIGR02341 359 ----------GEACTIVLRGATQQILDESERSLHDALCVLSQTVKESRTVLGGGCSEMLMSKAVAVEAQKVPGKEA-LAV 427 (519)
T ss_pred ----------CCEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhcCCChHH-HHH
Confidence 3689999999999999999999999999999999996 9999999999999999998877778777 899
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 504 DIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 504 ~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++|++||+.||++||+|||+|+.+++.+|
T Consensus 428 ~~~a~Ale~ip~~La~NaG~d~~~~l~~l 456 (519)
T TIGR02341 428 EAFARALRQLPTIIADNAGFDSAELVAQL 456 (519)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 99999999999999999999999998764
No 34
>KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-73 Score=573.15 Aligned_cols=400 Identities=21% Similarity=0.339 Sum_probs=366.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.-..-.|+.+|..+++.+++||||+||||+|++..|+.+|+|||+||+|-+++-||+ ||.|+++|++||.++||||
T Consensus 19 k~QlvSNInaC~~v~e~~rtTLGP~GmDkLivd~~g~~tIsNDGATIlKlldivhPa----aktlVdia~sQDaEVGDGT 94 (543)
T KOG0361|consen 19 KGQLVSNINACTAVAEALRTTLGPRGMDKLIVDSKGKTTISNDGATILKLLDIVHPA----AKTLVDIARSQDAEVGDGT 94 (543)
T ss_pred chhhhhchHHHHHHHHHHHhccCccccceeeecCCCcEEEecCcHHHHHHHhhcChh----HHHHHHHHhhccccccCCc
Confidence 446678999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-------hHHHHHhhhcC------Chhh
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-------ELADVAAVSAG------NNYE 218 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-------~l~~va~ts~~------~~~~ 218 (532)
||||+||+|+|+++..+++.|+||..|+++|++|...+++.|+++++.++.. .|++.|.|+++ ..++
T Consensus 95 TSVv~la~E~lk~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~~~~~r~lL~KcA~T~lsSKlI~~ek~f 174 (543)
T KOG0361|consen 95 TSVVLLAAEFLKEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSSKTELRELLEKCAATALSSKLIRQEKEF 174 (543)
T ss_pred eeEeeeHHHHHHhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccchhhHHHHHHHHHHHHhhhhhhhhhHHH
Confidence 9999999999999999999999999999999999999999999999988732 57788888764 4799
Q ss_pred HhHHHHHHHHhhccC---Cc--eEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccC-----
Q 009575 219 VGNMIAEAMSKVGRK---GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI----- 288 (532)
Q Consensus 219 is~li~eA~~~vg~~---g~--I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I----- 288 (532)
|++|++||+..+..+ .. |++.+|++++|| .+++|+-|.+.|....| +.+|+.|.||||+++|..+
T Consensus 175 F~~MvVDAV~~ld~~l~~~mIGIKKV~GG~~~dS-~lv~GVAFkKtFsYAGf----EqqPKk~~NpkIl~LnvELElKaE 249 (543)
T KOG0361|consen 175 FAKMVVDAVLTLDNDLDLNMIGIKKVPGGAMEDS-LLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNVELELKAE 249 (543)
T ss_pred HHHHHHHHHHhhccccchhhcceeecCCCccchh-hhccceeeeehccccch----hhCccccCCceEEEEeeeeeeccc
Confidence 999999999999854 22 666899999999 79999999999877766 6788999999999998753
Q ss_pred --------CCHHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhh
Q 009575 289 --------TNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (532)
Q Consensus 289 --------~~~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~ 349 (532)
++++++ .+.|+++..+|.++|+..-.|.|.|.++|+...+ .+.|+++.++
T Consensus 250 kdNAEiRv~~v~eyQ~iVDAEW~Ii~~KL~ki~~sGAnVVLSkLpIGD~ATQyFAdrdi-----------FCAGRV~~eD 318 (543)
T KOG0361|consen 250 KDNAEIRVDNVEEYQAIVDAEWNIIYDKLDKIHESGANVVLSKLPIGDLATQYFADRDI-----------FCAGRVPEED 318 (543)
T ss_pred ccCceeecCCHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEecccchHHHHHHhhccCc-----------eecCcCCHHH
Confidence 445544 4568899999999999999999999999988654 5778999999
Q ss_pred HHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHH
Q 009575 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (532)
Q Consensus 350 L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l 426 (532)
|.|+..+|||++.+ +..++.++.||.|..++ ++.++|-+|+||+..
T Consensus 319 l~Rv~~acGGsi~t-----t~~~i~~~~LG~C~~FeE~QvG~eRyN~Fegcp~a-------------------------- 367 (543)
T KOG0361|consen 319 LNRVMQACGGSIQT-----TVSDIKEEVLGTCALFEERQVGGERYNLFEGCPKA-------------------------- 367 (543)
T ss_pred HHHHHHhcCcchhh-----hhhhcchhhcchhhhHHHHhhcchhhhhhcCCCcc--------------------------
Confidence 99999999999998 57889999999999997 688999999999863
Q ss_pred HHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHH
Q 009575 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (532)
Q Consensus 427 ~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (532)
..||+++||+-++.++|.+|++|||++++|.|+++. ||+|||+.||++|++|++++.++.+++| +.+.+
T Consensus 368 ---------ktcTliLRGgaeqfieE~eRSlHDAImIVrralkn~~vVaGGGaiEMElSk~lRd~S~ti~gK~q-~~i~A 437 (543)
T KOG0361|consen 368 ---------KTCTLILRGGAEQFIEETERSLHDAIMIVRRALKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQQ-LFINA 437 (543)
T ss_pred ---------ceeEEEEeccHHHHHHHHhhhhhhHHHHHHHHhccCcEeeCCceeeehHHHHHHHhhcccCcHHH-HHHHH
Confidence 589999999999999999999999999999999998 9999999999999999999999999887 78999
Q ss_pred HHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 506 VKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 506 ~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++|||.||++||+|||+|..++++||
T Consensus 438 ~akalEvIPrqLc~NaGfDa~~ilnkL 464 (543)
T KOG0361|consen 438 YAKALEVIPRQLCDNAGFDATNILNKL 464 (543)
T ss_pred HHHHHHHhHHHHhhhcCCcHHHHHHHH
Confidence 999999999999999999999999875
No 35
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=5.8e-70 Score=591.45 Aligned_cols=383 Identities=30% Similarity=0.480 Sum_probs=346.6
Q ss_pred HHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCcccchHHHHHHHHHHH
Q 009575 85 LADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAE 164 (532)
Q Consensus 85 la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGTTt~vvLa~~Ll~~ 164 (532)
|+++|++||||+||+|||++..|+++|||||+||+++++++||+ ++|+++++++|++++||||||+++|+++||++
T Consensus 1 l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~~P~----~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~ 76 (485)
T PF00118_consen 1 LADIVKSSLGPKGRDKLIVNDSGKIIITNDGATILKSLKINHPI----AKLLVEASKSQDEEVGDGTTSVVLLACELLRN 76 (485)
T ss_dssp HHHHHGCCSSTTS-EEEEEESSSSEEEESSHHHHHHHSTBSSHH----HHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHH
T ss_pred ChhhcccCcCCCCCeEEEEcCCCCeEEEechhHHHHHhhhccch----hhhHHHhHHHHHhhhccccceeeecccchhhh
Confidence 68999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch--hHHHHHhhhcCCh------hhHhHHHHHHHHhhc-----
Q 009575 165 GVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS--ELADVAAVSAGNN------YEVGNMIAEAMSKVG----- 231 (532)
Q Consensus 165 ~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~--~l~~va~ts~~~~------~~is~li~eA~~~vg----- 231 (532)
+.+++++|+||..|++||+.+.+.+++.|++++++++.+ .++++++++++++ +.|++++++|+..+.
T Consensus 77 ~~~li~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~~~~~~~~l~~i~~t~l~~k~~~~~~~~l~~li~~a~~~~~~~~~~ 156 (485)
T PF00118_consen 77 ALKLIKKGIHPQEIIRGLQEALKIILEYLEKISIPINNDDESLLNIAKTSLNSKISSSWSDHLSKLIVDAIKSIKSNFDL 156 (485)
T ss_dssp HHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHSEESTSTSHHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHHHTTTHHG
T ss_pred hhhhhhccccccchhhhhhhhhhhhhhhhhhhhccccccchhhhhhhcccccccccccchhhhhhhHHHHHHhhcccccc
Confidence 999999999999999999999999999999999998864 8999999998876 999999999994432
Q ss_pred -cCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHH-----------------
Q 009575 232 -RKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARD----------------- 293 (532)
Q Consensus 232 -~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~e----------------- 293 (532)
..++++ .+|++++|| ++++|++|+++|.+| +|+.+++||+|++++++|+..+.
T Consensus 157 ~~i~i~~-i~g~~~~dS-~li~Giv~~~~~~~~-------~~~~~~~~~~Ill~~~~L~~~~~~~~~~~~~~~~~~~~~~ 227 (485)
T PF00118_consen 157 DNIKIIK-IPGGSISDS-ELINGIVLDKGFSSP-------NMPKKIENPKILLLNCPLEYSKSFKSEIRITSPEQLDELS 227 (485)
T ss_dssp GGEEEEE-EESSSSGGE-EEESEEEESSSBSST-------TSBSEEESEEEEEESSEBSSCCHSTEEEEESSTHHHHHHH
T ss_pred cchhhhh-hcccccccc-ccccceeeecccccc-------ccccccccceEEeeecccccccccccccchhhHHHHHHHH
Confidence 223333 588888999 899999999999887 47778899999999999876665
Q ss_pred ------HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCC
Q 009575 294 ------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVG 367 (532)
Q Consensus 294 ------l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~ 367 (532)
+.++++++.+.|+++||++++|++.++++|..+++ .++ .++++++|++|+.+||++++++
T Consensus 228 ~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I------~~i-----~~v~~~~l~~i~~~tg~~ii~~--- 293 (485)
T PF00118_consen 228 KQEKKYLKKILEKIINLGVNLIISQKSIDDEALQYLNKNGI------LVI-----RRVSKEDLERIARATGASIISS--- 293 (485)
T ss_dssp HHHHHHHHHHHHHHHTTTSSEEEESSEBTHHHHHHHHHCTH------EEE-----SSEHHHHHHHHHHHHTSBEBSS---
T ss_pred hhhhhhhccccceEeeeccceeeeecccccccchhhhhhhh------hcc-----ccchHHHHHhhhcccCCcEecc---
Confidence 88899999999999999999999999999998865 333 3668999999999999999994
Q ss_pred ccccCCCCCCCceeeEE---EEeCceEEEEcC--CCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEe
Q 009575 368 LALDKVGKEVLGNASKV---VLTKDTTTIVGD--GSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQV 442 (532)
Q Consensus 368 ~~l~~~~~~~lG~~~~v---~i~~~~~~~i~g--~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v 442 (532)
+++++++.+|+|+.+ ++++++++++.+ +. .+..+||+|
T Consensus 294 --~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-----------------------------------~~~~~Till 336 (485)
T PF00118_consen 294 --LDDLSDEDLGFCKSVEEREIGNKKYIFIEGIGCL-----------------------------------SSKICTILL 336 (485)
T ss_dssp --CGGSTGGGSEEEEEEEEEEETSSEEEEEEEHSES-----------------------------------SSSEEEEEE
T ss_pred --cccccchhhhhhhhhhhccccccccccccccccc-----------------------------------ccCceEEEe
Confidence 688888889999999 577899999983 32 357999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHc
Q 009575 443 GAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNA 521 (532)
Q Consensus 443 ~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NA 521 (532)
||+|+.+++|++++++||+++++++++++ +|||||++|++|+++|++++.+.++.++ +++++|++||+.||++|++||
T Consensus 337 ~g~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~~-~~~~~~a~aL~~ip~~L~~Na 415 (485)
T PF00118_consen 337 RGPTEFELEERERSIHDALKVLRSALKDGGVVPGGGATELHLSKALRKYAKSLSGKEQ-LAIEAFADALESIPKTLAQNA 415 (485)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHHHHHHSSEEEETTTHHHHHHHHHHHHHHHCSSSHHH-HHHHHHHHHTTHHHHHHHHHT
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhccCCceeecCcchhhhhhhhHHHhhhcccCchh-hhHHHHHHHHHHhhhhhhhcc
Confidence 99999999999999999999999999987 9999999999999999999888777765 899999999999999999999
Q ss_pred CCChhhhhccC
Q 009575 522 GVNGSVVSEKV 532 (532)
Q Consensus 522 G~d~~~vi~kl 532 (532)
|+|+.++++++
T Consensus 416 G~~~~~~~~~l 426 (485)
T PF00118_consen 416 GLDSSEVISKL 426 (485)
T ss_dssp TSTHHHHHHHH
T ss_pred CCCceeeehhh
Confidence 99999998764
No 36
>KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-67 Score=526.65 Aligned_cols=396 Identities=23% Similarity=0.363 Sum_probs=356.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecC--CCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK--YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~--~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GD 149 (532)
+.+|...+.|...+.|+|+|||||+||+||+.+. .|.+.|||||+||||+|.+++|+ ||+|++.+.-||+++||
T Consensus 17 e~ArlssfvGaiaigDlvKsTLGPKGMdKiL~s~~~~~~v~VTNDGAtILksi~vDnpa----AkvLv~~S~vQD~EvGD 92 (527)
T KOG0363|consen 17 ENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSTGRAGTVMVTNDGATILKSIGVDNPA----AKVLVDISKVQDDEVGD 92 (527)
T ss_pred hhHHHHHHHHHHHHHHHHHhccCcchHHHHHhccCCCCceEEecchHHHHHhcCCCCch----hhheeccccccccccCC
Confidence 7899999999999999999999999999999863 46799999999999999999999 99999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch------hHHHHHhhhcC------Chh
Q 009575 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS------ELADVAAVSAG------NNY 217 (532)
Q Consensus 150 GTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~------~l~~va~ts~~------~~~ 217 (532)
|||||+||+++||+|+.+|+.+.+||..|+.||+.|...+++.|.+.+++-..+ +|.++|+|.+. ..+
T Consensus 93 GTTSV~vlaaeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kfr~DLl~iarTTL~SKiLsq~ke 172 (527)
T KOG0363|consen 93 GTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKFREDLLKIARTTLSSKILSQDKE 172 (527)
T ss_pred CceehHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999999999999999999999999999999999988765422 89999998764 469
Q ss_pred hHhHHHHHHHHhhccCCc-----eEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC---
Q 009575 218 EVGNMIAEAMSKVGRKGV-----VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (532)
Q Consensus 218 ~is~li~eA~~~vg~~g~-----I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~--- 289 (532)
+|++|.++|+.++...+. |.++.|++++|| .+-+|+.+++.+-. .+|+.++||+||+-+.+++
T Consensus 173 hFaelavdAV~rLkGs~nL~~IqIIK~~Gg~l~dS-fLDeGFlL~K~igv--------~qpkriena~iLIANT~mDtDK 243 (527)
T KOG0363|consen 173 HFAELAVDAVLRLKGSTNLEAIQIIKKLGGKLEDS-FLDEGFLLDKKIGV--------NQPKRIENAKILIANTPMDTDK 243 (527)
T ss_pred HHHHHHHHHHHHhcCCCCccceeeehhcCCccccc-cccccceeccccCC--------CCcccccccceEEecCCCcccc
Confidence 999999999999865432 444799999999 79999999986432 3677899999999887632
Q ss_pred -----------CH-----------HHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccch
Q 009575 290 -----------NA-----------RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (532)
Q Consensus 290 -----------~~-----------~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k 347 (532)
+. +.+...++++.++|+|++|-.+-|.++..++|... +|++|....|
T Consensus 244 vKvfGarvrVds~~klaelE~AEkeKmK~KV~kI~~hgiN~FiNRQLiYnyPeqLf~da------gi~aIEHADF----- 312 (527)
T KOG0363|consen 244 VKVFGARVRVDSTAKLAELEKAEKEKMKEKVEKILKHGINVFINRQLIYNYPEQLFADA------GIMAIEHADF----- 312 (527)
T ss_pred eeeecceEeecchhHHHHHHHHHHHHHHHHHHHHHhcCCcEEeehhHhhcCHHHHHhhc------Ccceeecccc-----
Confidence 21 13567899999999999999999999999988765 5788887776
Q ss_pred hhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHH
Q 009575 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (532)
Q Consensus 348 ~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~ 424 (532)
+-+||++.+|||.+++ ++++++...||+|+.++ ++++.++.|+|+.-
T Consensus 313 dGiERLalvtGGeI~S-----TFd~p~~~klG~C~~IeeimiGed~li~FSGv~~------------------------- 362 (527)
T KOG0363|consen 313 DGIERLALVTGGEIVS-----TFDNPELVKLGECDLIEEIMIGEDKLIKFSGVKL------------------------- 362 (527)
T ss_pred hhHHHHhhcccceeee-----ccCCcchhccccchhhHHHhcCccceeeeccccc-------------------------
Confidence 5679999999999999 69999999999999996 68999999999864
Q ss_pred HHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHH
Q 009575 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (532)
Q Consensus 425 ~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (532)
|..|||++||+|++.+||.+|++|||||++...+++. +|.||||.||.+++.+.+++...++++. +++
T Consensus 363 ----------GeActIVlrGat~q~LDEaeRslHDALcVLaqtv~esrvv~GgG~sEm~Ma~av~~~A~~~pGkea-~Ai 431 (527)
T KOG0363|consen 363 ----------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKESRVVLGGGCSEMLMAKAVDKEAQETPGKEA-LAI 431 (527)
T ss_pred ----------ccceEEEEecccHHHHHHHHHHHHHHHHHHHHHhccceeeecCCcHHHHHHHHHHHHHhhCCchhh-HHH
Confidence 4589999999999999999999999999999999998 9999999999999999999999999887 899
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 504 DIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 504 ~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++|++||.++|.+||.|||||+.+++.+|
T Consensus 432 eAfarAL~qlPtiiaDNaG~dsaelva~L 460 (527)
T KOG0363|consen 432 EAFARALRQLPTIIADNAGYDSAELVAQL 460 (527)
T ss_pred HHHHHHHHhcchhhhccCCCCHHHHHHHH
Confidence 99999999999999999999999998754
No 37
>KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.7e-68 Score=529.84 Aligned_cols=403 Identities=23% Similarity=0.337 Sum_probs=354.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+.|..|+++.+.++|+++|||||+||||||....|+++|||||+||||.|++-||+ |+||++++..||.++||||
T Consensus 25 ~~vR~sni~Aa~avadairTSLGPkGmDKMIq~~~gev~iTNDGaTILk~m~vlhP~----akmLvelS~aQD~eaGDGT 100 (534)
T KOG0358|consen 25 EQVRFSNIQAARAVADAIRTSLGPKGMDKMIQTGKGEVIITNDGATILKQMNVLHPA----AKMLVELSAAQDSEAGDGT 100 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccchhhHhhcCCCcEEEecChHHHHHHHhhhChH----HHHHHHhhhhccccccCCc
Confidence 678999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC--ch-hHHHHHhhhcC------ChhhHhHH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAG------NNYEVGNM 222 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~------~~~~is~l 222 (532)
||||+||++||+.+.+|+++|+||..|...|+.|.+..+++|++++.|++ +. .|.+.|+||+| +...++.|
T Consensus 101 TsVVilaGaLL~~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~velsdre~Li~~atTsLnSKvvSq~s~llapm 180 (534)
T KOG0358|consen 101 TSVVILAGALLEAAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPVELSDRESLIKSATTSLNSKVVSQYSSLLAPM 180 (534)
T ss_pred eEEEEehhhHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCcccCcHHHHHHHHHhHhhHHHHHhhccccchH
Confidence 99999999999999999999999999999999999999999999998876 34 58889999986 46789999
Q ss_pred HHHHHHhhcc-C-------CceEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC---
Q 009575 223 IAEAMSKVGR-K-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (532)
Q Consensus 223 i~eA~~~vg~-~-------g~I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~--- 289 (532)
.+||+.++-. . ..|++ +.|++++|+ ++++|++|+...... ..|..++++||-+..+.|+
T Consensus 181 AVdAV~kv~dp~~~~nvdlkdIkivkklGgtvdDt-e~i~glvl~~~~~~~-------~gptriekAkIglIQF~iS~PK 252 (534)
T KOG0358|consen 181 AVDAVLKVIDPENATNVDLKDIKIVKKLGGTVDDT-ELIKGLVLTQKASKS-------AGPTRIEKAKIGLIQFQISPPK 252 (534)
T ss_pred HHHHHHhccCcccccccchhhhhhHHhhCCccchh-hhhcceEEeeecccC-------CCcchhhhceeeEEEEEecCCC
Confidence 9999999854 2 12443 699999999 999999999764331 1456678889888776543
Q ss_pred ----------CHH-----------HHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchh
Q 009575 290 ----------NAR-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (532)
Q Consensus 290 ----------~~~-----------el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~ 348 (532)
++. .++++++++++.|++++++++.|=.++++-|..+.+ ..++|++|| ++.++
T Consensus 253 tdmen~iiv~DyaqMdrilkeER~YiL~mcKkIKk~gcnvLliQKSILRdavsDLAlHfL-~klkimvik-----dieRe 326 (534)
T KOG0358|consen 253 TDMENQIIVNDYAQMDRILKEERQYILNMCKKIKKAGCNVLLIQKSILRDAVSDLALHFL-AKLKIMVIK-----DIERE 326 (534)
T ss_pred CCcccceEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEeHHHHHHHHHHHHHHHH-HhCcEEEEc-----cccHh
Confidence 332 257789999999999999999886666555554444 236899998 77899
Q ss_pred hHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE----eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHH
Q 009575 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL----TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (532)
Q Consensus 349 ~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i----~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~ 424 (532)
+++.+++.+|++++. +++.++++.||+++-++. ++.+++-+.|..+.
T Consensus 327 diefick~l~c~Pia-----~id~f~~d~Lg~adlveE~~~~G~gkivk~tg~~n~------------------------ 377 (534)
T KOG0358|consen 327 DIEFICKTLGCKPIA-----DIDHFTADKLGSADLVEETDSSGEGKIVKITGIQNA------------------------ 377 (534)
T ss_pred hHHHHHhhcCCeecc-----hhhhcChhhcCcchhhhhcccCCCccEEEEEEeecC------------------------
Confidence 999999999999999 499999999999999974 34467777776542
Q ss_pred HHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHH
Q 009575 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (532)
Q Consensus 425 ~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (532)
|..++|++||.+...++|.+|++|||||++|+.++.. ++||||+-||.++..|.++++++.+.+. +..
T Consensus 378 ----------g~tvsil~RGsn~lvleEaeRSlhDALCVirCLvk~r~li~GGGapEieia~~L~~~a~t~eG~~~-yc~ 446 (534)
T KOG0358|consen 378 ----------GRTVSILLRGSNKLVLEEAERSLHDALCVIRCLVKKRALIAGGGAPEIEIALRLSALARTLEGVEA-YCW 446 (534)
T ss_pred ----------CCceEEEEecCchhhhHHHhhhhhhhhHHHHhhhhccceecCCCCcchHHHHHHHHHHhhhccchh-HHH
Confidence 5789999999999999999999999999999999997 9999999999999999999999999987 799
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 504 DIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 504 ~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+.|++|||.+|.|||+|||++|..++.+|
T Consensus 447 rafA~AlEvIP~tLAeNAGLnpI~~VtEL 475 (534)
T KOG0358|consen 447 RAFADALEVIPYTLAENAGLNPIATVTEL 475 (534)
T ss_pred HHHHHHHhcccHhHHhhCCCChhhHHHHH
Confidence 99999999999999999999999988753
No 38
>KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-62 Score=506.52 Aligned_cols=398 Identities=24% Similarity=0.325 Sum_probs=350.1
Q ss_pred CcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCc
Q 009575 70 KDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (532)
Q Consensus 70 ~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GD 149 (532)
..+++.-.++++|++++++++|+|||+||||||+|+.|+..+|||.+||+|+++++||+ ||||+++++.|+++.||
T Consensus 23 ~~e~~v~~ni~a~~ela~~~rs~yGpng~nK~vvnh~~k~~~TndaatIlrelev~HPa----akllv~a~~~q~~~iGD 98 (537)
T KOG0362|consen 23 GEEEAVIRNIAAVRELANVIRSAYGPNGRNKMVVNHLGKTFVTNDAATILRELEVEHPA----AKLLVEATQMQEEEIGD 98 (537)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceeeecccceEEEcCChHHHHHHhhccCcH----HHHHHHHHHHHHHhhCC
Confidence 34778889999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhccc-ccCch-hHHHHHhhh-----cCChhhHhHH
Q 009575 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSK-EVEDS-ELADVAAVS-----AGNNYEVGNM 222 (532)
Q Consensus 150 GTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~-~v~~~-~l~~va~ts-----~~~~~~is~l 222 (532)
||+++|+|+++||+++.++|..|++|.+|+.||+.|.+.+++.|.++.. .+.+. +...+++++ +.++++++++
T Consensus 99 gtnfvvvla~~LLe~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~~~d~~d~~~~~rs~i~skq~~~ed~l~~l 178 (537)
T KOG0362|consen 99 GTNFVVVLAGALLEQAEELIRMGLTPAEISEGYETATKEALEILPELVVQSIGDLEDKEWALRSVIMSKQYGNEDFLTKL 178 (537)
T ss_pred CceEeehhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHhcccccChHHHHHHHHHHhhcchHHHHHHH
Confidence 9999999999999999999999999999999999999999999998743 22222 222444443 3568999999
Q ss_pred HHHHHHhhccCC-----ceE--EecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc--------
Q 009575 223 IAEAMSKVGRKG-----VVT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------- 287 (532)
Q Consensus 223 i~eA~~~vg~~g-----~I~--v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~-------- 287 (532)
+++|+..+.|.+ .|. +..|++++|| .++.||+|.+.. ++.+..-+.++|.++.||
T Consensus 179 Va~ac~si~p~~~FnvdnIrVcKi~Gg~l~~S-~Vv~GmVfkr~~---------eG~v~~ak~arvAvf~cP~d~~~TEt 248 (537)
T KOG0362|consen 179 VAKACVSILPLMSFNVDNIRVCKILGGGLEDS-CVVCGMVFKRDP---------EGEVKSAKDARVAVFACPFDIAQTET 248 (537)
T ss_pred HHHHHHhhcccccccccceEEEEEecCCcccc-eeeEEEEecccc---------CCcccccccceeEEEecCCCcccccC
Confidence 999999998873 222 2599999999 899999999862 334455678899999998
Q ss_pred -----CCCHHHHHH-----------HHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHH
Q 009575 288 -----ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLD 351 (532)
Q Consensus 288 -----I~~~~el~~-----------~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~ 351 (532)
|++++|+.+ .++.+...|++++++...+++.+|+++ |+ .+|++++.++ +.+|.
T Consensus 249 kgTvLi~~A~el~~FSKgEe~lle~~vk~Ia~~gvkViV~~g~V~em~Lhfl--nk----y~ImVlqi~S-----k~eLr 317 (537)
T KOG0362|consen 249 KGTVLLKNAKELLNFSKGEEALLEEQVKAIADAGVKVIVSGGKVDEMTLHFL--NK----YKIMVLQINS-----KFDLR 317 (537)
T ss_pred cceeeecCcHhhhhhccccHHHHHHHHHHHHhcCCeEEEecCccchhhhhhh--cc----ccEEEEEecc-----HhhHH
Confidence 677777654 467788899999999999999998875 44 3789999887 89999
Q ss_pred HHHHHhCCeEeecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 009575 352 DIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNE 428 (532)
Q Consensus 352 ~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~e 428 (532)
++++..||++++ ++..+.++.+|+|++|. +++..+++|.....
T Consensus 318 rlcrtvGA~~l~-----rl~~P~~~~lG~~d~V~~~EiG~~~v~vF~~e~~----------------------------- 363 (537)
T KOG0362|consen 318 RLCRTVGATALP-----RLFPPAPEELGYCDSVSTQEIGDTLVVVFRWEST----------------------------- 363 (537)
T ss_pred HHHHHcCCccch-----hccCCCCccccccceeeeeecCCceEEEEeeccC-----------------------------
Confidence 999999999999 58889999999999996 46777777764321
Q ss_pred HHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHH
Q 009575 429 RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVK 507 (532)
Q Consensus 429 R~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a 507 (532)
.+.++||+|||+|+..+|+.||.++|++++.+..++++ ++||+|++|++|++.|.++++++++.+| ++++.|+
T Consensus 364 -----~~~~~TvVLRgst~s~LDd~ERAVddgV~tyK~l~~d~rLlpGagatEieLak~i~~~g~~~~Gl~q-~Aik~fa 437 (537)
T KOG0362|consen 364 -----GTRVATVVLRGATQSILDDAERAVDDGVNTYKALCSDSRLLPGAGATEIELAKQISSRGATLPGLKQ-LAIKKFA 437 (537)
T ss_pred -----CCceeEEEEcccchhhHHHHHHHHHHhHHHhhhhccCCccccCCchhHHHHHHHHHHhcccCCCcch-hHHHHHH
Confidence 13689999999999999999999999999999999998 9999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHHHHcCCChhhhhccC
Q 009575 508 RALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 508 ~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+||+.+|++|++|||+++.+|+.++
T Consensus 438 ~Ale~~PktlaEnagl~~~evia~l 462 (537)
T KOG0362|consen 438 EALEVLPKTLAENAGLAVTEVIAKL 462 (537)
T ss_pred HHhccccHhHHHhcCCcHHHHHHHH
Confidence 9999999999999999999999764
No 39
>KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-61 Score=495.94 Aligned_cols=401 Identities=23% Similarity=0.314 Sum_probs=354.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
..+|..|..+...++++|++||||-|+|||+++.+|.+.+||||+|||+.+.++||+ +|+|++.++.||+++||||
T Consensus 18 ~~vr~qnv~a~~~i~nivkss~GPvGldKmlvdd~Gdvt~TndgAtiL~~l~V~HPa----~KiLvelaq~qd~evgDgt 93 (545)
T KOG0360|consen 18 ERVRTQNVMAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILSLLEVEHPA----AKVLVELAQLQDEEVGDGT 93 (545)
T ss_pred hhhhhhhhHHHHHHHHHHHhccCccchhhhccccccceEEeccHHHHHHhhhhcchH----HHHHHHHHHhccccccCCc
Confidence 668888999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHh-cccccCch---hHHHHHhhhcC------ChhhHhH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVEDS---ELADVAAVSAG------NNYEVGN 221 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~-~s~~v~~~---~l~~va~ts~~------~~~~is~ 221 (532)
|+|++++++||+.+.+|+..++||..|+.||+.|+..+++++.+ ++.|++.- -|.++++++++ ..++|++
T Consensus 94 tsvviia~eLl~~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~vd~lg~~~Lin~~ktsmsSK~i~~ds~~f~~ 173 (545)
T KOG0360|consen 94 TSVVIIAAELLKNADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPVDSLGTQILINLAKTSMSSKIIGMDSDFFTE 173 (545)
T ss_pred eEEEEEEHHhhhhHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeehhhcchHHHHHHHHhhhcceecccchHHHHH
Confidence 99999999999999999999999999999999999999999976 57777754 78899998864 3689999
Q ss_pred HHHHHHHhhcc---CC---------ceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccC-
Q 009575 222 MIAEAMSKVGR---KG---------VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI- 288 (532)
Q Consensus 222 li~eA~~~vg~---~g---------~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I- 288 (532)
++++|+..+.- +| .|-+-.|.+..|| .++.|+.+.....+. .|+..+.|+||+++|+.+
T Consensus 174 ~Vvda~l~v~~~~~~ge~~ypi~~vnILkahG~s~~eS-~l~~GyaLnc~~asq-------~m~~~i~~~Kiacld~~Lq 245 (545)
T KOG0360|consen 174 MVVDALLAVKILDINGEPHYPINSVNILKAHGKSQIES-MLLPGYALNCSVASQ-------MMPLRIKNAKIACLDFTLQ 245 (545)
T ss_pred HHHHHHHHHhhcccCCceeccccceeEEecCCccchhh-eeecceeeeccHhhh-------ccccccccceeeeEecccc
Confidence 99999998742 23 1333599999999 699999999876653 478888999999999863
Q ss_pred ------------CCHHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCcc
Q 009575 289 ------------TNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (532)
Q Consensus 289 ------------~~~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~ 345 (532)
++++++ +..++++...|+|+|+++++|||.++.+|++.. ++||+ +.
T Consensus 246 k~km~lGv~vvv~dp~kle~ir~~e~~itkeRi~kIl~~ganvVLtt~gIddmc~K~~veag------amAVr-----R~ 314 (545)
T KOG0360|consen 246 KTKMKLGVQVVVDDPEKLEQIRQREQDITKERIKKILATGANVVLTTGGIDDMCLKYFVEAG------AMAVR-----RC 314 (545)
T ss_pred cccccccceEEEcChHHHHHHHHHHhHhHHHHHHHHHhcCCcEEEEcCCccHHHHHHHHHcc------hhhhH-----HH
Confidence 555543 234778999999999999999999999999873 46554 78
Q ss_pred chhhHHHHHHHhCCeEeecCCCccc-cCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHH
Q 009575 346 KSQYLDDIAILTGGTVIRDEVGLAL-DKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (532)
Q Consensus 346 ~k~~L~~ia~~tG~~ii~~~~~~~l-~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~ 421 (532)
++++|++|+++||++++++.-++.- +.+.+..+|+|++|. +++|.++++.+.+-
T Consensus 315 ~k~dlk~iakatGat~~sSla~l~geetf~~~~lG~a~evvqeri~dde~ilikg~ka---------------------- 372 (545)
T KOG0360|consen 315 KKEDLKRIAKATGATLLSSLANLEGEETFEPASLGSADEVVQERIGDDELILIKGTKA---------------------- 372 (545)
T ss_pred HHHHHHHHHHhhCCeeeehhhccccccccChhhccchhHHHHHhcccceeEEeccCcc----------------------
Confidence 8999999999999999997443332 346789999999996 57889999987542
Q ss_pred HHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHH
Q 009575 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (532)
Q Consensus 422 e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (532)
..|+|++||++++.+||.+|.+|||+++++..++++ +||||||+|.+|+-+|+.++.+..++||
T Consensus 373 --------------~~aSiILrgaNd~~~DEmers~hdaL~VlkrtLes~~vvpGGG~vE~aLs~yle~~a~s~~srE~- 437 (545)
T KOG0360|consen 373 --------------TSASIILRGANDFMLDEMERSLHDALCVLKRTLESKSVVPGGGAVETALSIYLENFATSVGSREQ- 437 (545)
T ss_pred --------------ceeeEEEecCCcccHhhhccchhhHHHHHHHHhccCccccCccHHHHHHHHHHHhhcccCccHHH-
Confidence 379999999999999999999999999999999999 9999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 501 ~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+++--|+.||..+|++|+-||+.|+.+++.++
T Consensus 438 laiaefa~all~ipktla~naa~Dstelvt~l 469 (545)
T KOG0360|consen 438 LAIAEFAAALLSIPKTLAVNAAKDSTELVTKL 469 (545)
T ss_pred HHHHHHHHHHhcchHHHhhhhccccccccccc
Confidence 67888999999999999999999999998875
No 40
>KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-58 Score=469.51 Aligned_cols=390 Identities=19% Similarity=0.280 Sum_probs=353.3
Q ss_pred HHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCcccchHHH
Q 009575 77 KLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVV 156 (532)
Q Consensus 77 ~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGTTt~vv 156 (532)
.|+++.++++|.+++||||+.|-||+.++.|.+..||||..|+++|++.||. |+-+.+++.+||+++|||||||++
T Consensus 23 ~ni~aak~iadvirtclgp~am~kmlld~~g~i~~tndg~ailrei~Vahpa----aksmiel~rtqdeevgdgttsvi~ 98 (527)
T KOG0364|consen 23 GNIQAAKAIADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGTTSVII 98 (527)
T ss_pred cchhhHHHHHHHHHHhcChHHHHHHhhccCCceEEecCcHHHHHHHhhcCcc----hhhHhhhhhcccccccCCceeeee
Confidence 4677899999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch---hHHHHHhhhcC------ChhhHhHHHHHHH
Q 009575 157 LAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS---ELADVAAVSAG------NNYEVGNMIAEAM 227 (532)
Q Consensus 157 La~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~---~l~~va~ts~~------~~~~is~li~eA~ 227 (532)
|++|+|.++..+++.|+||+.+++.|.+|++.++..++++++|++.+ .++++..++.+ |.+.++++..+|+
T Consensus 99 lagE~L~~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~d~~~~~km~~vi~~~v~tk~~~~~~~~~~~lal~av 178 (527)
T KOG0364|consen 99 LAGEMLNVAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPVDVKDQAKMLRVINSSVGTKFNSRWSDLICNLALDAV 178 (527)
T ss_pred ehHHHhhhcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccCCcccHHHHHhhhhhhhhhhhhhhhcchhhhHHHHHH
Confidence 99999999999999999999999999999999999999998887744 77777776643 5788999999999
Q ss_pred HhhccC-Cc-------eE--EecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCH------
Q 009575 228 SKVGRK-GV-------VT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA------ 291 (532)
Q Consensus 228 ~~vg~~-g~-------I~--v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~------ 291 (532)
.+|+.+ |. ++ +.+|+.++|| ++++|+.+.+...||. |...++||+|+++|+++..-
T Consensus 179 k~V~~~~g~e~dik~y~kveKvpgg~l~~s-~vl~Gv~~nkdv~Hpk-------mrr~IenprivLlD~~LeykkGeSqt 250 (527)
T KOG0364|consen 179 KTVGVENGREIDIKRYAKVEKVPGGLLEDS-CVLKGVMINKDVTHPK-------MRRAIENPRIVLLDCPLEYKKGESQT 250 (527)
T ss_pred HHhhhccCceechhhhccccccCccccccc-ceecceeeccccCcHH-------HHHHhhcCcEEEecCCccCCCCcccc
Confidence 999875 32 22 3699999999 8999999999999984 77789999999999986321
Q ss_pred ------------------HHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHH
Q 009575 292 ------------------RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDI 353 (532)
Q Consensus 292 ------------------~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~i 353 (532)
+++..+++.+....++|||+.+++++.|.++|.++++ .++++.+|.+-.+|
T Consensus 251 nve~~~eed~~r~Lqieee~v~~mc~~Ii~v~pDlVitekG~sdla~hyl~k~~i-----------T~~rr~rKtDn~ri 319 (527)
T KOG0364|consen 251 NVEIVKEEDFTRILQIEEEQVQAMCEVIIAVKPDLVITEKGVSDLAQHYLLKANI-----------TAIRRLRKTDNNRI 319 (527)
T ss_pred ceeeeechhHHHHHHhhHHHHHHHHHHHHeecccEEEeccchhHHHHHHHHhcCc-----------hhhhhhhccccchh
Confidence 2345678888999999999999999999999998865 56678999999999
Q ss_pred HHHhCCeEeecCCCccccCCCCCCCce-eeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 009575 354 AILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNER 429 (532)
Q Consensus 354 a~~tG~~ii~~~~~~~l~~~~~~~lG~-~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR 429 (532)
+++||+++++ +++++...+.|+ |+-+++ ++++|+||..|.++
T Consensus 320 a~acga~iv~-----rpedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck~p----------------------------- 365 (527)
T KOG0364|consen 320 ARACGARIVN-----RPEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCKEP----------------------------- 365 (527)
T ss_pred hhhcCceecc-----ChhhCchhccCcccceeeeeccCchhhhhhhhcCCC-----------------------------
Confidence 9999999998 589999999997 778875 67899999999876
Q ss_pred HhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHH
Q 009575 430 IAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKR 508 (532)
Q Consensus 430 ~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~ 508 (532)
+.|||++||+|...++|.+|.+.||+.+.|+.+-++ ++|||||+||.+|+.|.+.+...++.++ -.+.+++.
T Consensus 366 ------kaCtillrg~skdil~e~ernlqda~~varn~ii~PklvPGGGAtEMAvs~~L~qksa~~~GVek-wPY~Ava~ 438 (527)
T KOG0364|consen 366 ------KACTILLRGPSKDILNEVERNLQDAMGVARNVIINPKLVPGGGATEMAVSHELRQKSALMTGVEK-WPYGAVAG 438 (527)
T ss_pred ------cceEEEeccCchhHHHHHHHHhhhHHHHHHHhccCCcccCCccHHHHHHHHHHHHHHhhccchhc-cchhhhhc
Confidence 589999999999999999999999999999999999 9999999999999999998888888877 78999999
Q ss_pred HHHHHHHHHHHHcCCChhhhhc
Q 009575 509 ALCYPLKLIAKNAGVNGSVVSE 530 (532)
Q Consensus 509 AL~~~p~~La~NAG~d~~~vi~ 530 (532)
||+.+|++|++|+|.++..++.
T Consensus 439 AlEviPrtliqncGan~Ir~lT 460 (527)
T KOG0364|consen 439 ALEVIPRTLIQNCGANPIRALT 460 (527)
T ss_pred CceeccHHHHhhcCccHHHHHH
Confidence 9999999999999999987764
No 41
>KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-54 Score=441.29 Aligned_cols=395 Identities=23% Similarity=0.367 Sum_probs=347.2
Q ss_pred HHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCcccc
Q 009575 73 YAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTT 152 (532)
Q Consensus 73 ~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGTT 152 (532)
.+...++.+...+.+.+++.+||+|..||+++..|++++|+||.+.+++|+++||- |-++..++..||+..|||||
T Consensus 17 aal~iNis~AigLqsV~~snlgPkgt~KmlvsgagdIklakdgnvLl~emQiqhPT----a~lIakaatAqdd~tGDGtt 92 (520)
T KOG0359|consen 17 AALALNISAAIGLQSVLVLNLGPKGTEKMLVSGAGDIKLAKDGNVLLKEMQIQHPT----ASLIAKVATAQDDITGDGTT 92 (520)
T ss_pred cceeeccccccceeeeehhccCchhHHHhccCCccceEEEecchhhHHHHhhcCch----HHHHHHHHHHhhcccCCCcc
Confidence 45667778888899999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCchhHHHHHhhhcCC------hhhHhHHHHHH
Q 009575 153 TSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGN------NYEVGNMIAEA 226 (532)
Q Consensus 153 t~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~~l~~va~ts~~~------~~~is~li~eA 226 (532)
|+|+|.++|++++..++..|+||..|..||+.|.+.++++|++.+.+++...|..|++++++. -+.+++++++|
T Consensus 93 S~VlligEllkqa~~~i~eGlhprii~~gfe~a~~~~l~~L~k~~~~~~~~~L~~va~tsl~Tkv~~~la~~lt~~vv~a 172 (520)
T KOG0359|consen 93 SVVLLIGELLKQADRYISEGLHPRIITEGFEAAKNKALEFLEKVSREVDRETLKDVARTSLRTKVHAELADVLTPIVVDS 172 (520)
T ss_pred eEEEeeHHHHHHHHHHhhcCCCcchhhhHHHHHHHHHHhhhhccccchhHHHHHHHHHHhhcCcccHHHHhHhHHHHHhh
Confidence 999999999999999999999999999999999999999999888888766899999999875 37788899999
Q ss_pred HHhhcc-CCceE-----E--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC---------
Q 009575 227 MSKVGR-KGVVT-----L--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--------- 289 (532)
Q Consensus 227 ~~~vg~-~g~I~-----v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~--------- 289 (532)
+..+.+ ++.|. + -+-.+..|+ .+++|.++|+|-.||. ||+.++|+.||++|..++
T Consensus 173 Vl~i~~~~~~idl~mveim~mq~~s~~dT-~~v~glvLdhg~rHpd-------mp~~~e~a~iL~~NvSLEYEK~Einsg 244 (520)
T KOG0359|consen 173 VLCIRRQEEPIDLFMVEIMEMQHKSLHDT-SLVQGLVLDHGARHPD-------MPRRVEDAYILICNVSLEYEKPEINSG 244 (520)
T ss_pred heeeccCCCCcchhHHHhhhhccCchhhh-HHhhhhhccCCCCCcc-------cccchhceEEEEeeccccccccccccc
Confidence 998873 33221 1 244566777 6999999999999984 888899999999998653
Q ss_pred ----CHHH-----------HHHHHHHHHhcCC---C-eEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhH
Q 009575 290 ----NARD-----------LINVLEDAIRGAY---P-ILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYL 350 (532)
Q Consensus 290 ----~~~e-----------l~~~le~i~~~g~---~-lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L 350 (532)
+++| +.+.+.+++..+. . +||.+++|||..|+.|.++.+ + +.++-++..|
T Consensus 245 ffYsta~ere~L~~~eR~Fi~~r~~kiielk~~vc~fvvinqkGidp~sld~~a~~gI------l-----aLRRAKRRNm 313 (520)
T KOG0359|consen 245 FFYSTAEEREVLVLAERKFIDQRVRKIIELKRKVCEFVVINQKGIDPTSLDSLAKSGI------L-----ALRRAKRRNM 313 (520)
T ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcceEEEecccCCCCCcchhhhhcch------H-----HHHHHhhhhH
Confidence 2221 1223455555443 2 446678999999999988743 4 4457789999
Q ss_pred HHHHHHhCCeEeecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHH
Q 009575 351 DDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLN 427 (532)
Q Consensus 351 ~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~ 427 (532)
||+..+|||..+. ++++++|+.||+|+.|+ +++++|+|+++|.++
T Consensus 314 ERL~lacGG~a~n-----svddLtp~~LG~aglVye~tlGEEkfTFIE~~~~p--------------------------- 361 (520)
T KOG0359|consen 314 ERLVLACGGEAVN-----SVDDLTPDYLGYAGLVYEYTLGEEKFTFIEKCNNP--------------------------- 361 (520)
T ss_pred HHHHHhhccceec-----ccccCChhhccccceeEEeeccceeeEeeecCCCC---------------------------
Confidence 9999999999998 59999999999999997 579999999999886
Q ss_pred HHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHH
Q 009575 428 ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIV 506 (532)
Q Consensus 428 eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~ 506 (532)
+.|||+++||+.+.+.+.|++++|++++++++++++ ++||+|++|+.+..+|+...++.+++.+ +|+++|
T Consensus 362 --------~S~TiLikgpnkht~tQikdairdglrav~ntl~d~~~i~Gaga~~va~~~~lr~~k~~vkgra~-~g~~af 432 (520)
T KOG0359|consen 362 --------SSVTILIKGPNKHTITQIKDAIRDGLRAVKNTLEDKCGIPGAGAFEVALGRHLRESKKSVKGRAY-LGVKAF 432 (520)
T ss_pred --------cceEEEEeCCccchHHHHHHHHhhHHHHHHHHhhhcccccCchHHHHHHHHHHHHhhhccCchhh-hhHHHH
Confidence 589999999999999999999999999999999998 9999999999999999988888889887 899999
Q ss_pred HHHHHHHHHHHHHHcCCChhhhhcc
Q 009575 507 KRALCYPLKLIAKNAGVNGSVVSEK 531 (532)
Q Consensus 507 a~AL~~~p~~La~NAG~d~~~vi~k 531 (532)
++||..+|++|++|+|+|+.+.+.+
T Consensus 433 a~all~ipk~La~nsg~D~qe~l~~ 457 (520)
T KOG0359|consen 433 ANALLVIPKTLAKNSGLDEQETLVS 457 (520)
T ss_pred HhhhhhhhHHHHHhcCCchHHHHHH
Confidence 9999999999999999999998765
No 42
>KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.2e-52 Score=411.53 Aligned_cols=316 Identities=26% Similarity=0.332 Sum_probs=291.6
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHH
Q 009575 58 PKIYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVR 137 (532)
Q Consensus 58 ~~~~~~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~ 137 (532)
+|-.-.|...|| .++.+.++-+..++++++++++||+|++|++..+.|++.+|||| .|++ ++|+.
T Consensus 15 LrDQd~~~Ri~G--~ea~Ks~I~agkaVA~~lrtSLGPkGlDK~l~~pdgditvtndg---------d~~I----akLmv 79 (400)
T KOG0357|consen 15 LRDQERKDRLFG--LDAVKSHIGAAKAVARILRTSLGPKGLDKMLVSPDGDITVTNDG---------VHQI----AKLIV 79 (400)
T ss_pred eeeccCCchhhH--HHHhhhhhHHHHHHHHHHHhhcCccccccccccCCCCceeeecc---------chHH----HHHHH
Confidence 333335677788 89999999999999999999999999999999999999999999 6787 99999
Q ss_pred HHHhccccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCchhHHHHHhhhcCChh
Q 009575 138 QAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGNNY 217 (532)
Q Consensus 138 e~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~~l~~va~ts~~~~~ 217 (532)
+.++.|+.+.|||||.+++|++.+++++..++..|+||..|..||.++...+++.|.+.+.+++
T Consensus 80 ~LS~sqd~eIgdGtTgVvvLa~alleqa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~e---------------- 143 (400)
T KOG0357|consen 80 ILSKSQDDEIGDGTTGVVVLAGALLEQAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPFE---------------- 143 (400)
T ss_pred HhcccchhhhccCCcccEEecccchHhHHhhcccccchhHHHHhhhhHHHhhhhhhhhhccccc----------------
Confidence 9999999999999999999999999999999999999999999999999999999887665532
Q ss_pred hHhHHHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHH
Q 009575 218 EVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINV 297 (532)
Q Consensus 218 ~is~li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~ 297 (532)
+..+
T Consensus 144 ----------------------------------------------------------------------------f~em 147 (400)
T KOG0357|consen 144 ----------------------------------------------------------------------------FEEM 147 (400)
T ss_pred ----------------------------------------------------------------------------HHHH
Confidence 3456
Q ss_pred HHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCC
Q 009575 298 LEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEV 377 (532)
Q Consensus 298 le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~ 377 (532)
++++++.|.+++||+|++||||.++|..|.+ |..+|+.-.++|-||+.|||++++ ++++++++.
T Consensus 148 i~~vK~~ga~l~icqwgfddeanhll~~n~l-----------pavrwVGGpEiEliAiaT~grIVp-----rF~eL~~~k 211 (400)
T KOG0357|consen 148 IQQIKETGANLAICQWGFDDEANHLLLQNNL-----------PAVRWVGGPEIELIAIATGGRIVP-----RFSELTAEK 211 (400)
T ss_pred HHHHHhhCCcEEEEecccCchhhhHHhhcCC-----------CceeecCCcceEEEEeecCCeeec-----cHhhhCHhh
Confidence 7888999999999999999999999999976 777788889999999999999999 599999999
Q ss_pred CceeeEEEE-----eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHH
Q 009575 378 LGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKE 452 (532)
Q Consensus 378 lG~~~~v~i-----~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E 452 (532)
||+|+.|+- ++|++.+++.|++. +.+||.|||.+...++|
T Consensus 212 LG~aglVrE~sfgttkdkmlviEqc~ns-----------------------------------kaVTifvRg~Nkmii~E 256 (400)
T KOG0357|consen 212 LGFAGLVREISFGTTKDKMLVIEQCKNS-----------------------------------KAVTIFVRGGNKMIIEE 256 (400)
T ss_pred ccccceEEEEecccccceEEEEEecCCC-----------------------------------ceEEEEEecCcceeHHH
Confidence 999999962 48899999999874 58999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhcc
Q 009575 453 KKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEK 531 (532)
Q Consensus 453 ~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~k 531 (532)
.||++|||||++|+.+++. +|+|||++|+.||-.+.+.+.++++.|| +++.+|++||++||..||+|+|++|.+.+++
T Consensus 257 akrslhdalCvirnlird~rivYgGGaaEiscslav~~ead~~~g~eq-ya~rafa~ale~ipmalaensgl~pi~~ls~ 335 (400)
T KOG0357|consen 257 AKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKIPGIEQ-YAFRAFADALESIPMALAENSGLDPIETLSD 335 (400)
T ss_pred HHHHhhhhHHHHHHHhhcCeeEecCchHHhhhhhHhhHhhccCCcHHH-HHHHHHHHHHhhcchhhhhccCCCchhhhhH
Confidence 9999999999999999998 9999999999999999999999999998 7999999999999999999999999988765
Q ss_pred C
Q 009575 532 V 532 (532)
Q Consensus 532 l 532 (532)
+
T Consensus 336 ~ 336 (400)
T KOG0357|consen 336 V 336 (400)
T ss_pred h
Confidence 3
No 43
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=99.96 E-value=1.8e-28 Score=238.80 Aligned_cols=191 Identities=37% Similarity=0.488 Sum_probs=168.8
Q ss_pred hHHHHHhhhcC-----ChhhHhHHHHHHHHhhcc------CCceEE--ecCCCccceeeEEeeeEEeecccCCccccCcc
Q 009575 204 ELADVAAVSAG-----NNYEVGNMIAEAMSKVGR------KGVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSE 270 (532)
Q Consensus 204 ~l~~va~ts~~-----~~~~is~li~eA~~~vg~------~g~I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~ 270 (532)
.|.++|+|+++ +++.+++++++|+..+++ .+.|.+ .+|++++|| ++++|++|+++|.+|+
T Consensus 3 ~l~~ia~ts~~sk~~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds-~li~Gv~~~~~~~~~~------ 75 (209)
T cd03333 3 LLLQVATTSLNSKLSSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDS-ELVVGVVFDKGYASPY------ 75 (209)
T ss_pred HHHHHHHHHhccchhhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhc-eeEeeEEEeccccCCC------
Confidence 47889999998 899999999999999988 345554 699999999 8999999999999986
Q ss_pred cCeeeccceeEeeecccCCCHHHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhH
Q 009575 271 KMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYL 350 (532)
Q Consensus 271 ~~~~~~~npkIll~d~~I~~~~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L 350 (532)
|+.+++||+|++++++|+. +|+++++|+++++++|..+ +|+||+. +++++|
T Consensus 76 -m~~~~~n~~Ill~~~~le~-----------------vii~~~~I~~~al~~l~~~------~I~~v~~-----~~~~~l 126 (209)
T cd03333 76 -MPKRLENAKILLLDCPLEY-----------------VVIAEKGIDDLALHYLAKA------GIMAVRR-----VKKEDL 126 (209)
T ss_pred -CCeEcCCCcEEEEeCCeeE-----------------EEEecCcccHHHHHHHHHC------CCEEEEe-----CCHHHH
Confidence 5778999999999999887 8888888999999999885 5688874 668999
Q ss_pred HHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHH
Q 009575 351 DDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLN 427 (532)
Q Consensus 351 ~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~ 427 (532)
+|||.+|||+++++ +++++++.||+|+++++. ++.+++|.+|..
T Consensus 127 ~~ia~~tga~ii~~-----~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~---------------------------- 173 (209)
T cd03333 127 ERIARATGATIVSS-----LEDLTPEDLGTAELVEETKIGEEKLTFIEGCKG---------------------------- 173 (209)
T ss_pred HHHHHHHCCEEecc-----cccCChhhceeeeEEEEEEECCeEEEEEEcCCC----------------------------
Confidence 99999999999994 788889999999999874 456888887754
Q ss_pred HHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHc
Q 009575 428 ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEE 470 (532)
Q Consensus 428 eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~ 470 (532)
+..|||+|||+|+.+++|.||+++||++++++++++
T Consensus 174 -------~~~~tIllrG~t~~~l~e~kr~l~dal~~~~~~~~~ 209 (209)
T cd03333 174 -------GKAATILLRGATEVELDEVKRSLHDALCAVRAAVEE 209 (209)
T ss_pred -------CCEEEEEEECCCHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 368999999999999999999999999999999874
No 44
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=99.94 E-value=3.3e-26 Score=230.36 Aligned_cols=199 Identities=20% Similarity=0.189 Sum_probs=168.6
Q ss_pred ChhhHhHHHHHHHHhhccC---C-------ceEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009575 215 NNYEVGNMIAEAMSKVGRK---G-------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (532)
Q Consensus 215 ~~~~is~li~eA~~~vg~~---g-------~I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIl 282 (532)
|.++|++++++|+..+.++ + .|++ .+|++++|| ++++|++|++++.++ .||.+++||+|+
T Consensus 19 ~~~~ls~l~v~Av~~v~~~~~~~~~~di~~~I~I~ki~Ggs~~dS-~li~Gvvi~k~~~~~-------~m~~~i~n~kIl 90 (261)
T cd03334 19 WLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIPGGSPSDS-EVVDGVVFTKNVAHK-------RMPSKIKNPRIL 90 (261)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCccChhHceEEEEecCCCHHHc-EEEeeEEEeCCCCCc-------cCCcccCCCcEE
Confidence 5789999999999998632 1 2443 699999999 899999999998775 478889999999
Q ss_pred eecccCCCH------H-----------HHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCcc
Q 009575 283 LVDKKITNA------R-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (532)
Q Consensus 283 l~d~~I~~~------~-----------el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~ 345 (532)
+++++|+.. . .+.+.+++++..|+++||++++|++.++++|.++ +|++|+ ++
T Consensus 91 ll~~~Le~~~~~~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nvIl~~k~I~~~a~~~l~k~------gI~~v~-----~v 159 (261)
T cd03334 91 LLQGPLEYQRVENKLLSLDPVILQEKEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEA------GITLVL-----NV 159 (261)
T ss_pred EEeeeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccCHHHHHHHHHC------CCEEEE-----ec
Confidence 999987432 1 2456789999999999999999999999999887 456666 56
Q ss_pred chhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eC-----ceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 009575 346 KSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TK-----DTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (532)
Q Consensus 346 ~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~-----~~~~~i~g~~~~~~i~~r~~~i~~~l~~~ 417 (532)
++++|++||++|||+++++ -.+.++++.||+|+.|++ ++ +.+++|.+|+.+
T Consensus 160 ~~~dl~rIa~~tGa~ii~~----i~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~~----------------- 218 (261)
T cd03334 160 KPSVLERISRCTGADIISS----MDDLLTSPKLGTCESFRVRTYVEEHGRSKTLMFFEGCPKE----------------- 218 (261)
T ss_pred CHHHHHHHHHHhCCEEecC----hhhhcCcccCcCcceEEEEEecCcCCCceeEEEEecCCCC-----------------
Confidence 7899999999999999994 034788899999999985 33 589999988753
Q ss_pred hhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC
Q 009575 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 471 (532)
Q Consensus 418 ~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g 471 (532)
..+||+|||+|+..++|.||.++||+++++++..++
T Consensus 219 ------------------~~~TIlLRG~t~~~lde~eR~i~Dal~v~~~~~le~ 254 (261)
T cd03334 219 ------------------LGCTILLRGGDLEELKKVKRVVEFMVFAAYHLKLET 254 (261)
T ss_pred ------------------ceeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 589999999999999999999999999999998875
No 45
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=99.25 E-value=5.2e-11 Score=138.02 Aligned_cols=208 Identities=18% Similarity=0.203 Sum_probs=167.8
Q ss_pred ChhhHhHHHHHHHHhhccC----------Cc--eEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009575 215 NNYEVGNMIAEAMSKVGRK----------GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (532)
Q Consensus 215 ~~~~is~li~eA~~~vg~~----------g~--I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIl 282 (532)
|.+.+..|+.+|...+.++ +. ++.+.||+..|| +++.|++|.+...+ +.|..++++|+|+
T Consensus 333 W~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~~dS-~vi~Gvv~sKn~~~-------k~M~~~~e~pril 404 (1598)
T KOG0230|consen 333 WLDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSRVDS-EVIKGVVCSKNVAH-------KRMATKYENPRIL 404 (1598)
T ss_pred HHHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCcccc-eeeeEEEeecchhh-------hhhhhhccCCceE
Confidence 4678999999999998875 23 444789999999 89999999997665 4578889999999
Q ss_pred eecccCC---------CHH--------HHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCcc
Q 009575 283 LVDKKIT---------NAR--------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (532)
Q Consensus 283 l~d~~I~---------~~~--------el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~ 345 (532)
++.++|. +++ .+...+.++...+.+++++.++|++.|..+|... |+.-+. ++
T Consensus 405 ll~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~vllVeksVS~~aqe~L~~k---~I~lvl--------nv 473 (1598)
T KOG0230|consen 405 LLGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPDVLLVEKSVSRIAQELLLDK---GISLVL--------NV 473 (1598)
T ss_pred EEecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCCeEEEechHHHHHHHHhhcc---CeEEEE--------ec
Confidence 9988642 222 2455677888889999999999999999998764 443333 66
Q ss_pred chhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEe--------CceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 009575 346 KSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT--------KDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (532)
Q Consensus 346 ~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~--------~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~ 417 (532)
++..|+||+++||+.|++ +++.++...||+|..+++. .+.++||+||..+
T Consensus 474 K~s~leRIsR~tga~I~~-----siDslt~~klg~C~~F~v~~~~e~hk~sKTlmffegc~~~----------------- 531 (1598)
T KOG0230|consen 474 KRSLLERISRCTGADIVP-----SVDSLTSQKLGYCELFRVENYVEEHKPSKTLMFFEGCPKP----------------- 531 (1598)
T ss_pred cHHHHHHHHHHhcCceec-----chhhhhccccCCCccHhhhhhhhcccchhhhHHhhcCCCC-----------------
Confidence 789999999999999998 5888999999999999863 2457788888764
Q ss_pred hhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHc-CccccCchhhh
Q 009575 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEE-GIVVGGGCTLL 481 (532)
Q Consensus 418 ~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~-gvVpGGGa~el 481 (532)
..|||++||.+..++.+.|+-++-++-|+.+..=+ .++.--|+...
T Consensus 532 ------------------lG~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~asi~ 578 (1598)
T KOG0230|consen 532 ------------------LGCTILLRGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGASIS 578 (1598)
T ss_pred ------------------CCceEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCccc
Confidence 36899999999999999999999999998776444 47777776544
No 46
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=97.33 E-value=0.00037 Score=77.10 Aligned_cols=88 Identities=23% Similarity=0.242 Sum_probs=70.8
Q ss_pred HHHHHHHHHhcCCC-eEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhH-HHHHHHhCCeEeecCCCcccc
Q 009575 294 LINVLEDAIRGAYP-ILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYL-DDIAILTGGTVIRDEVGLALD 371 (532)
Q Consensus 294 l~~~le~i~~~g~~-lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L-~~ia~~tG~~ii~~~~~~~l~ 371 (532)
+..+++.+.+.|.+ +++++++|+|.++++|..+. |. ..|++.++++ ++|+.+|||++++ .++
T Consensus 259 l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~------Il-----t~~~v~~~dl~~~l~~~~ga~~v~-----~~~ 322 (524)
T COG0459 259 LATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIA------IL-----TGRRVKKEDLGERLAKLGGAKIVS-----VLK 322 (524)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhc------ce-----ecceecchhhHHHHHHccCceEEe-----ecc
Confidence 34567788899999 88999999999999998874 34 4456778899 7999999999999 588
Q ss_pred CCCCCCCce--eeEEEE---eCceEEEEcCC
Q 009575 372 KVGKEVLGN--ASKVVL---TKDTTTIVGDG 397 (532)
Q Consensus 372 ~~~~~~lG~--~~~v~i---~~~~~~~i~g~ 397 (532)
++++..+|. |+.|+. ++++++++.++
T Consensus 323 d~t~~~~G~~~~~~ve~~~~~~~~~~~~~~~ 353 (524)
T COG0459 323 DLTTIVLGEGAAGLVEETKTGDYDMEKLQER 353 (524)
T ss_pred cCceeecCccccceEEEeeccchhhhhhhhh
Confidence 999999999 999974 34455555543
No 47
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=58.48 E-value=3.1 Score=46.42 Aligned_cols=62 Identities=26% Similarity=0.415 Sum_probs=51.9
Q ss_pred cCCCeEEEcccccH-----HHHHHHHHhhhcccc----eEEEeeCCCCCccchhhHHHHHHHhCCeEeecCC
Q 009575 304 GAYPILIIAEDIEQ-----EALATLVVNKLRGAL----KIAALKAPGFGERKSQYLDDIAILTGGTVIRDEV 366 (532)
Q Consensus 304 ~g~~lvIia~~I~~-----~al~~L~~n~~~g~~----~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~ 366 (532)
...++.|..+++++ +++..+..+++++++ ++++++.| +++...++|++.+++++.++..+++
T Consensus 246 ~~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~-i~d~~~~~L~~~~I~~~~~v~~~dl 316 (522)
T TIGR02345 246 EKDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLP-IGDLATQYFADHNIFCAGRVSDEDL 316 (522)
T ss_pred cccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCC-ccHHHHHHHHHCCcEEEecCCHHHH
Confidence 34578888888888 888888888888755 89999988 9999999999999999998877643
No 48
>smart00574 POX domain associated with HOX domains.
Probab=42.71 E-value=1.8e+02 Score=26.77 Aligned_cols=59 Identities=22% Similarity=0.213 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHh
Q 009575 420 DYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (532)
Q Consensus 420 ~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~ 491 (532)
..|+..++.+.++|- ..++|.+++++--..-++..+..= .|+|+|++-.+.+-+|+..+
T Consensus 69 ~~~r~e~q~kk~kLl-------------~mL~eVd~RY~qY~~qmq~v~ssFe~vaG~g~a~~yt~lAl~a~S 128 (140)
T smart00574 69 TAERQELQRKKAKLL-------------SMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTIS 128 (140)
T ss_pred hhHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 455666666666652 456777777776666666666653 78999999988888887765
No 49
>COG1433 Uncharacterized conserved protein [Function unknown]
Probab=41.59 E-value=1.1e+02 Score=27.46 Aligned_cols=42 Identities=24% Similarity=0.346 Sum_probs=30.7
Q ss_pred HHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCcc
Q 009575 296 NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (532)
Q Consensus 296 ~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~ 345 (532)
.+.+.+++.|+++||+. .|.+.+++.|... .|-+++.++ +.+
T Consensus 56 ~~a~~l~~~gvdvvi~~-~iG~~a~~~l~~~------GIkv~~~~~-~~V 97 (121)
T COG1433 56 RIAELLVDEGVDVVIAS-NIGPNAYNALKAA------GIKVYVAPG-GTV 97 (121)
T ss_pred HHHHHHHHcCCCEEEEC-ccCHHHHHHHHHc------CcEEEecCC-CCH
Confidence 35788889999999976 7888888888664 344566666 444
No 50
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=32.77 E-value=3.1e+02 Score=26.56 Aligned_cols=75 Identities=23% Similarity=0.305 Sum_probs=50.8
Q ss_pred eeeccceeEeeecccCCCHHHHHHHHHHHHhcCC---CeEEEcccccHHHHHHHHHhhhcccceEEEee---------CC
Q 009575 273 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAY---PILIIAEDIEQEALATLVVNKLRGALKIAALK---------AP 340 (532)
Q Consensus 273 ~~~~~npkIll~d~~I~~~~el~~~le~i~~~g~---~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk---------~~ 340 (532)
|..+++..++++|--+.+-..+...++.+.+.|+ ++++++--.+++.+..+..+.-+=.+-+++|. .|
T Consensus 116 P~~i~~~~VillDpmlaTG~s~~~ai~~L~~~G~~~~~I~~v~~ias~~Gl~~l~~~~P~v~I~ta~iD~~L~~~~~i~P 195 (207)
T PF14681_consen 116 PEDIENRKVILLDPMLATGGSAIAAIEILKEHGVPEENIIIVSVIASPEGLERLLKAFPDVRIYTAAIDPELNENGYIVP 195 (207)
T ss_dssp -TTGTTSEEEEEESEESSSHHHHHHHHHHHHTTG-GGEEEEEEEEEEHHHHHHHHHHSTTSEEEEEEEESEEETTSEEES
T ss_pred CCCccCCEEEEEeccccchhhHHHHHHHHHHcCCCcceEEEEEEEecHHHHHHHHHhCCCeEEEEEEEccccCCCCCccC
Confidence 3345677899999888888889999999999886 46666655677888888776553233344443 57
Q ss_pred CCCccch
Q 009575 341 GFGERKS 347 (532)
Q Consensus 341 ~~g~~~k 347 (532)
|+||...
T Consensus 196 GlGD~Gd 202 (207)
T PF14681_consen 196 GLGDAGD 202 (207)
T ss_dssp S-S-HHH
T ss_pred CCCChHh
Confidence 7777643
No 51
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=28.82 E-value=2.4e+02 Score=23.60 Aligned_cols=54 Identities=17% Similarity=0.207 Sum_probs=32.8
Q ss_pred HHHHHHHhcCCCeEEEcccccHHHHHHHHHh-hhcccceEEEeeCCCCCccchhhHHHHHHHhCCe
Q 009575 296 NVLEDAIRGAYPILIIAEDIEQEALATLVVN-KLRGALKIAALKAPGFGERKSQYLDDIAILTGGT 360 (532)
Q Consensus 296 ~~le~i~~~g~~lvIia~~I~~~al~~L~~n-~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ 360 (532)
+.++.+.+....+|++++|+++....-|..- .-++ +.++ ..| .+++|.++||-.
T Consensus 20 qt~Kai~kg~~~~v~iA~Da~~~vv~~l~~lceek~-Ip~v--~V~--------s~~~LGkAcgi~ 74 (84)
T PRK13600 20 ETLKALKKDQVTSLIIAEDVEVYLMTRVLSQINQKN-IPVS--FFK--------SKHALGKHVGIN 74 (84)
T ss_pred HHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHcC-CCEE--EEC--------CHHHHHHHhCCC
Confidence 3455565666789999999998766644311 1112 2333 222 367888888865
No 52
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=24.56 E-value=1.9e+02 Score=25.43 Aligned_cols=42 Identities=24% Similarity=0.369 Sum_probs=31.0
Q ss_pred eeecccCCCHHHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHH
Q 009575 282 LLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVV 325 (532)
Q Consensus 282 ll~d~~I~~~~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~ 325 (532)
.++|+ ++++...+.++...+.|+|+|+..-+.+++-+..+..
T Consensus 70 VvIDf--T~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~ 111 (124)
T PF01113_consen 70 VVIDF--TNPDAVYDNLEYALKHGVPLVIGTTGFSDEQIDELEE 111 (124)
T ss_dssp EEEEE--S-HHHHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHH
T ss_pred EEEEc--CChHHhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHH
Confidence 34454 3788888889999999999999999998877776655
No 53
>PF07526 POX: Associated with HOX; InterPro: IPR006563 This domain in found exclusively in plant proteins, associated with HOX domains which may suggest these proteins are homeodomain transcription factors.
Probab=21.54 E-value=2.8e+02 Score=25.44 Aligned_cols=44 Identities=20% Similarity=0.178 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHh
Q 009575 448 TELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (532)
Q Consensus 448 ~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~ 491 (532)
..++|..++++--..-++..+..= -|.|.|++-.+.+-+|+..+
T Consensus 84 ~mL~eVd~RY~qY~~Qmq~VvssFe~vaG~gaA~~YtalAlqamS 128 (140)
T PF07526_consen 84 SMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAAPYTALALQAMS 128 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHHHHHHHH
Confidence 345555555555555555554442 58899999999888888776
No 54
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=21.14 E-value=89 Score=29.34 Aligned_cols=41 Identities=15% Similarity=0.310 Sum_probs=30.4
Q ss_pred ccceeEeeecccCCC-----HHHHHHHHHHHHhcCCCeEEEccccc
Q 009575 276 YENCKLLLVDKKITN-----ARDLINVLEDAIRGAYPILIIAEDIE 316 (532)
Q Consensus 276 ~~npkIll~d~~I~~-----~~el~~~le~i~~~g~~lvIia~~I~ 316 (532)
+.+|+++++|.|-+. .+.+.+++..+.+.|..+|++.-+.+
T Consensus 143 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 143 AMRPDVLLLDEPTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 468999999998543 35677778777777888888776643
Done!