Query 009575
Match_columns 532
No_of_seqs 155 out of 1734
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 08:16:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009575.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009575hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 3E-112 1E-116 929.3 44.9 466 63-532 2-468 (547)
2 1we3_A CPN60(groel); chaperoni 100.0 5E-111 2E-115 920.9 48.5 466 63-532 2-468 (543)
3 3rtk_A 60 kDa chaperonin 2; he 100.0 2E-112 6E-117 929.9 36.4 464 63-532 2-466 (546)
4 1iok_A Chaperonin 60; chaperon 100.0 6E-112 2E-116 927.9 37.9 466 63-532 3-469 (545)
5 3p9d_C T-complex protein 1 sub 100.0 2.5E-92 8.4E-97 777.9 33.6 433 64-532 12-527 (590)
6 3p9d_A T-complex protein 1 sub 100.0 4.5E-90 1.5E-94 758.4 34.4 409 63-532 16-477 (559)
7 3ko1_A Chaperonin; 9-fold symm 100.0 2E-88 6.9E-93 744.0 43.5 404 63-532 22-473 (553)
8 3iyg_B T-complex protein 1 sub 100.0 3.4E-88 1.2E-92 737.4 44.7 402 64-532 3-452 (513)
9 1q3q_A Thermosome alpha subuni 100.0 2.6E-88 9E-93 743.2 41.5 404 63-532 15-466 (548)
10 3iyg_H T-complex protein 1 sub 100.0 6.2E-88 2.1E-92 735.3 43.8 400 72-532 10-455 (515)
11 3ruv_A Chaperonin, CPN; double 100.0 3.6E-88 1.2E-92 741.5 42.1 403 64-532 12-459 (543)
12 1a6d_B Thermosome (beta subuni 100.0 7.4E-88 2.5E-92 739.3 43.1 404 63-532 13-464 (543)
13 1a6d_A Thermosome (alpha subun 100.0 4.6E-88 1.6E-92 740.9 40.3 403 63-532 14-463 (545)
14 3p9d_D T-complex protein 1 sub 100.0 6.9E-89 2.4E-93 744.9 31.9 408 63-532 11-469 (528)
15 3iyg_A T-complex protein 1 sub 100.0 4.3E-87 1.5E-91 731.2 42.9 408 64-532 3-461 (529)
16 3iyg_E T-complex protein 1 sub 100.0 1E-86 3.5E-91 726.4 43.3 403 64-532 3-455 (515)
17 3iyg_D T-complex protein 1 sub 100.0 1.5E-86 5.1E-91 725.3 42.8 402 65-532 5-459 (518)
18 3p9d_B T-complex protein 1 sub 100.0 5.9E-88 2E-92 738.1 28.8 403 63-532 9-459 (527)
19 3p9d_G T-complex protein 1 sub 100.0 7.7E-88 2.6E-92 739.4 29.7 405 64-532 17-468 (550)
20 3p9d_E T-complex protein 1 sub 100.0 1.3E-86 4.3E-91 731.4 36.8 410 63-532 37-498 (562)
21 3iyg_Q T-complex protein 1 sub 100.0 1.4E-85 4.8E-90 717.0 42.7 396 72-532 10-451 (512)
22 3iyg_G T-complex protein 1 sub 100.0 3.1E-85 1E-89 714.5 43.3 397 72-532 8-454 (515)
23 3iyg_Z T-complex protein 1 sub 100.0 3.7E-84 1.3E-88 705.9 39.6 400 66-532 5-458 (517)
24 3p9d_H T-complex protein 1 sub 100.0 1.2E-84 4.1E-89 716.5 35.8 397 72-532 25-478 (568)
25 3p9d_F T-complex protein 1 sub 100.0 5.2E-84 1.8E-88 709.3 28.4 402 65-532 11-473 (546)
26 3aq1_B Thermosome subunit; gro 100.0 1.2E-78 3.9E-83 660.5 34.7 368 101-532 1-417 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 5.2E-51 1.8E-55 382.0 15.8 193 248-440 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 1.4E-49 4.8E-54 373.0 16.8 189 251-439 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 4.6E-38 1.6E-42 281.8 14.6 144 253-396 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 4.7E-22 1.6E-26 188.0 13.9 146 244-448 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 1.1E-18 3.7E-23 161.9 13.5 127 251-400 1-154 (159)
32 3s6g_A N-acetylglutamate kinas 25.1 1.9E+02 0.0064 30.4 8.5 52 429-483 48-104 (460)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=3.4e-112 Score=929.27 Aligned_cols=466 Identities=56% Similarity=0.844 Sum_probs=456.1
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+|+|.|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+||+||||++++|++
T Consensus 2 ~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~ 79 (547)
T 1kp8_A 2 AKDVKFG--NDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASK 79 (547)
T ss_dssp CEEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHH
T ss_pred Ccccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHh
Confidence 7999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhH
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~ 221 (532)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. +|.++|++|++++++|++
T Consensus 80 qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~ 159 (547)
T 1kp8_A 80 ANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGK 159 (547)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHH
T ss_pred hccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999877 999999999999999999
Q ss_pred HHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHH
Q 009575 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (532)
Q Consensus 222 li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i 301 (532)
|++||+.+++++|+|++++|++++||+++++||+|+++|.||||++++++|+++++||+||++|++|+++++++++++++
T Consensus 160 liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i 239 (547)
T 1kp8_A 160 LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV 239 (547)
T ss_dssp HHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHH
T ss_pred HHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCcee
Q 009575 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (532)
Q Consensus 302 ~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~ 381 (532)
.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||++++++.|++++++++++||+|
T Consensus 240 ~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a 319 (547)
T 1kp8_A 240 AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQA 319 (547)
T ss_dssp HGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEE
T ss_pred HhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Q 009575 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (532)
Q Consensus 382 ~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl 461 (532)
++|++++++|++|+||++++.+++|++||+.+++.++++|+||+|+||+++|+|++|||+|||+|+.+++|+||+++|||
T Consensus 320 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl 399 (547)
T 1kp8_A 320 KRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL 399 (547)
T ss_dssp EEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred eEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++|+++++|+|||||++|++++.+|++++. .++. +++++++|++||+.||++||+|||+|+.+++.+|
T Consensus 400 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~-~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l 468 (547)
T 1kp8_A 400 HATRAAVEEGVVAGGGVALIRVASKLADLRG-QNAD-QNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTV 468 (547)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSHH-HHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCch-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 9999999999999999999999999998875 5454 4599999999999999999999999999999874
No 2
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=4.7e-111 Score=920.93 Aligned_cols=466 Identities=56% Similarity=0.862 Sum_probs=456.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+|+|.|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+||+||||++++|++
T Consensus 2 ~k~~~~g--~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~ 79 (543)
T 1we3_A 2 AKILVFD--EAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASK 79 (543)
T ss_dssp CEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHH
T ss_pred Ccccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHh
Confidence 7999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhH
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~ 221 (532)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. +|.+||++|++ +++|++
T Consensus 80 qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~ 158 (543)
T 1we3_A 80 TNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGK 158 (543)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHH
T ss_pred hheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999877 99999999998 899999
Q ss_pred HHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHH
Q 009575 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (532)
Q Consensus 222 li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i 301 (532)
|++||+.+++++|+|++++|++++|++++++||+|+++|.||||++++++|+++++||+||++|++|+++++++++++++
T Consensus 159 li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i 238 (543)
T 1we3_A 159 LIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQV 238 (543)
T ss_dssp HHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCcee
Q 009575 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (532)
Q Consensus 302 ~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~ 381 (532)
.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||++++++.|++++++++++||+|
T Consensus 239 ~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a 318 (543)
T 1we3_A 239 AQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRA 318 (543)
T ss_dssp HTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEE
T ss_pred HhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Q 009575 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (532)
Q Consensus 382 ~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl 461 (532)
+.|+++++++++|+||++++.+++|++||+.++++++++|++|+|+||+++|+|++|||+|||+|+.+++|+||+++|||
T Consensus 319 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl 398 (543)
T 1we3_A 319 ERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDAL 398 (543)
T ss_dssp EEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++|+++++|+|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 399 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l 468 (543)
T 1we3_A 399 NATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEA-TGAKIVRRALEEPARQIAENAGYEGSVIVQQI 468 (543)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHH-HHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 99999999999999999999999999999876666655 89999999999999999999999999998864
No 3
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.7e-112 Score=929.94 Aligned_cols=464 Identities=57% Similarity=0.851 Sum_probs=386.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+|+|.|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||++|+||||++++|++
T Consensus 2 ~k~~~~~--~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~ 79 (546)
T 3rtk_A 2 AKTIAYD--EEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKK 79 (546)
T ss_dssp -------------------------------------------------------------CCCHHHHHHHHHHHHHHTS
T ss_pred Cceeecc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHh
Confidence 7999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhH
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~ 221 (532)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. +|.+||++|++ +++|++
T Consensus 80 qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~ 158 (546)
T 3rtk_A 80 TDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGD 158 (546)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHH
T ss_pred hhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999977 99999999998 889999
Q ss_pred HHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHH
Q 009575 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (532)
Q Consensus 222 li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i 301 (532)
|++||+.+++++|+|+++.+....+.+++++||+|+++|.||||++++++|+++++||+|+++|++|+++++++++++++
T Consensus 159 liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I 238 (546)
T 3rtk_A 159 LIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKV 238 (546)
T ss_dssp HHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHH
T ss_pred HHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHH
Confidence 99999999999999999888776555599999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCcee
Q 009575 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (532)
Q Consensus 302 ~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~ 381 (532)
.+.|+|||||+++|+++|+++|+.|+++|+++|+|||+|+||+.++++|+|||++|||++++++.|++++++++++||+|
T Consensus 239 ~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a 318 (546)
T 3rtk_A 239 IGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKA 318 (546)
T ss_dssp HTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEE
T ss_pred HhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Q 009575 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (532)
Q Consensus 382 ~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl 461 (532)
++|+++++++++|+||++++.++.|++||+.++++++++||+|+|+||+++|+|++|||+|||+|+.+++|+||+++|||
T Consensus 319 ~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl 398 (546)
T 3rtk_A 319 RKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAV 398 (546)
T ss_dssp EEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHH
T ss_pred EEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++|+++++|+|||||++|++++.+|++++ +++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 399 ~a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l 466 (546)
T 3rtk_A 399 RNAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGDEA-TGANIVKVALEAPLKQIAFNSGLEPGVVAEKV 466 (546)
T ss_dssp HHHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTTHH-HHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHH
T ss_pred HHHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999999999999999887 666665 89999999999999999999999999998764
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=5.6e-112 Score=927.93 Aligned_cols=466 Identities=54% Similarity=0.847 Sum_probs=413.6
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+|+|.|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+||+||||++++|++
T Consensus 3 ~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~ 80 (545)
T 1iok_A 3 AKEVKFN--SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASR 80 (545)
T ss_dssp CEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHH
T ss_pred chhhhcc--HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHh
Confidence 7999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCch-hHHHHHhhhcCChhhHhH
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~is~ 221 (532)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. +|.+||++|++++++|++
T Consensus 81 qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~ 160 (545)
T 1iok_A 81 TNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQ 160 (545)
T ss_dssp GGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHH
T ss_pred hccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhccCCceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHH
Q 009575 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (532)
Q Consensus 222 li~eA~~~vg~~g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i 301 (532)
|++||+.+++++|+|++++|++++||+++++||+|+++|.||||++++++|+++++||+||++|++|+++++++++++++
T Consensus 161 li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i 240 (545)
T 1iok_A 161 QIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESV 240 (545)
T ss_dssp HHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC--------
T ss_pred HHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCcee
Q 009575 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (532)
Q Consensus 302 ~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~ 381 (532)
.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||+++++++|++++++++++||+|
T Consensus 241 ~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a 320 (545)
T 1iok_A 241 IQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRA 320 (545)
T ss_dssp ---CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEE
T ss_pred HhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Q 009575 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (532)
Q Consensus 382 ~~v~i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl 461 (532)
++|++++++|++|+||++++.+++|++||+.+++.++++|+||+|+||+++|+|++|||+|||+|+.+++|+||+++|||
T Consensus 321 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl 400 (545)
T 1iok_A 321 KKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDAL 400 (545)
T ss_dssp EEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred cEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++|+++++|+|||||++|++++++|++++. .++. +++++++|++||+.||++||+|||+|+.+++.+|
T Consensus 401 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l 469 (545)
T 1iok_A 401 NATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANSD-QDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKV 469 (545)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSHH-HHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCch-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 9999999999999999999999999998875 5554 4599999999999999999999999999998864
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.5e-92 Score=777.87 Aligned_cols=433 Identities=19% Similarity=0.279 Sum_probs=370.6
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhcc
Q 009575 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (532)
Q Consensus 64 k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~ 143 (532)
.+..+| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 12 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Akll~e~a~~q 85 (590)
T 3p9d_C 12 QERTTG--RQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AKSMLELSRTQ 85 (590)
T ss_dssp CCBCTT--HHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HHTHHHHTTTH
T ss_pred cchhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HHHHHHHHHhh
Confidence 456788 899999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHHHH-HHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc--h-hHHHHHhhhcC-----
Q 009575 144 NDLAGDGTTTSVVLAQGLIAEGVKV-VAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG----- 214 (532)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~l-i~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~----- 214 (532)
|+++||||||+||||++||+++.++ +++|+||+.|++||++|++.++++|+++++|++. . +|.++|+||++
T Consensus 86 d~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~ 165 (590)
T 3p9d_C 86 DEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVI 165 (590)
T ss_dssp HHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTG
T ss_pred hhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999 9999999999999999999999999999999875 3 89999998864
Q ss_pred -ChhhHhHHHHHHHHhhccCCc----------------eEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeee
Q 009575 215 -NNYEVGNMIAEAMSKVGRKGV----------------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVE 275 (532)
Q Consensus 215 -~~~~is~li~eA~~~vg~~g~----------------I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~ 275 (532)
++++|++|++||+.+++++|. |++ .+|++++|+ ++++||+|++++.+| +|+++
T Consensus 166 ~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~-------~m~~~ 237 (590)
T 3p9d_C 166 HWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHP-------KMSRH 237 (590)
T ss_dssp GGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCT-------TSCSC
T ss_pred ccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCC-------CCcce
Confidence 579999999999999998653 333 469999999 899999999998776 48889
Q ss_pred ccceeEeeeccc-------------CCCHHHHHHHH-----------HHHHhcCCCeEEEcccccHHHHHHHHHhhhccc
Q 009575 276 YENCKLLLVDKK-------------ITNARDLINVL-----------EDAIRGAYPILIIAEDIEQEALATLVVNKLRGA 331 (532)
Q Consensus 276 ~~npkIll~d~~-------------I~~~~el~~~l-----------e~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~ 331 (532)
++||+|+++|++ |++++++.+++ +++++.|++|||++++|+++|+++|+++++
T Consensus 238 ~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I--- 314 (590)
T 3p9d_C 238 IENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGC--- 314 (590)
T ss_dssp EESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTC---
T ss_pred eeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccc---
Confidence 999999999995 35566665544 688899999999888999999999998743
Q ss_pred ceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCce-eeEEE---EeCceEEEEcCCCChhh-----
Q 009575 332 LKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVV---LTKDTTTIVGDGSTQDA----- 402 (532)
Q Consensus 332 ~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~-~~~v~---i~~~~~~~i~g~~~~~~----- 402 (532)
+.|+++++.+|+|||++|||++++ +++++++++||+ |+.|+ +++++|++|.||+++..
T Consensus 315 --------~av~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~ 381 (590)
T 3p9d_C 315 --------SVLRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWS 381 (590)
T ss_dssp --------CCCCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEECEEECC-----------
T ss_pred --------eeeccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCcccccccc
Confidence 467899999999999999999998 589999999999 99997 57899999999998888
Q ss_pred ---------------------HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Q 009575 403 ---------------------VSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (532)
Q Consensus 403 ---------------------i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl 461 (532)
+++|++||+.+++.++++|+++ +++|+|++|||+|||+|+.+++|+||+++|||
T Consensus 382 ~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl 456 (590)
T 3p9d_C 382 HPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDILNEIDRNLQDAM 456 (590)
T ss_dssp ---------------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHH
T ss_pred ccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999966 47899999999999999999999999999999
Q ss_pred HHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 462 NATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 462 ~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++|+++++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+||.+++.+|
T Consensus 457 ~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l 527 (590)
T 3p9d_C 457 AVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQ-WPYQAVADAMECIPRTLIQNAGGDPIRLLSQL 527 (590)
T ss_dssp HHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTH-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 9999999995 9999999999999999999888888776 89999999999999999999999999998764
No 6
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=4.5e-90 Score=758.40 Aligned_cols=409 Identities=22% Similarity=0.333 Sum_probs=379.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
+|++.|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 16 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 89 (559)
T 3p9d_A 16 GGEKISG--DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQ 89 (559)
T ss_dssp SCEEEET--HHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHH
T ss_pred cccccch--HHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHH
Confidence 6999999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHh-cccccCc--h-hHHHHHhhhcCC---
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVED--S-ELADVAAVSAGN--- 215 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~-~s~~v~~--~-~l~~va~ts~~~--- 215 (532)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ +++|++. . +|.++|+||+++
T Consensus 90 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~ 169 (559)
T 3p9d_A 90 QDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKII 169 (559)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGG
T ss_pred HHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999 9999985 3 899999999875
Q ss_pred ---hhhHhHHHHHHHHhhcc-----CCc-----eEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeecc--c
Q 009575 216 ---NYEVGNMIAEAMSKVGR-----KGV-----VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE--N 278 (532)
Q Consensus 216 ---~~~is~li~eA~~~vg~-----~g~-----I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~--n 278 (532)
+++|++|++||+.++++ +|. |++ .+|++++|| ++++||+|+++|.||+ |+++++ |
T Consensus 170 ~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ie~~n 241 (559)
T 3p9d_A 170 GADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQA-------MPKRIAGGN 241 (559)
T ss_dssp GTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTT-------SCSEECSSS
T ss_pred cchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCC-------cceeeccCC
Confidence 89999999999999984 244 433 359999998 8999999999999997 456788 9
Q ss_pred eeEeeecccC-------------CCHHH-----------HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceE
Q 009575 279 CKLLLVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKI 334 (532)
Q Consensus 279 pkIll~d~~I-------------~~~~e-----------l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i 334 (532)
|+|+++|++| +++++ +.++++++.+.|+||||++++|+++|+++|++|++
T Consensus 242 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I------ 315 (559)
T 3p9d_A 242 VKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKI------ 315 (559)
T ss_dssp BCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTC------
T ss_pred ceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCC------
Confidence 9999999987 34444 67889999999999999999999999999999853
Q ss_pred EEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccc-cCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHH
Q 009575 335 AALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLAL-DKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQI 410 (532)
Q Consensus 335 ~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l-~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i 410 (532)
+|| +++++++|+|||++|||+++++..++.+ +++++++||+|+.|+ +++++|++|.||++
T Consensus 316 ~av-----~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------- 379 (559)
T 3p9d_A 316 MGV-----RRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK----------- 379 (559)
T ss_dssp EEE-----SSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS-----------
T ss_pred ceE-----ccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC-----------
Confidence 555 4788999999999999999998777665 889999999999998 58999999999876
Q ss_pred HHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHH
Q 009575 411 RTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDA 489 (532)
Q Consensus 411 ~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~ 489 (532)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++
T Consensus 380 ------------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~ 435 (559)
T 3p9d_A 380 ------------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDN 435 (559)
T ss_dssp ------------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHH
T ss_pred ------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999 999999999999999999
Q ss_pred HhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 490 IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 490 ~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 436 ~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l 477 (559)
T 3p9d_A 436 FATTVGSREQ-LAIAEFAAALLIIPKTLAVNAAKDSSELVAKL 477 (559)
T ss_dssp HHTTSCTTHH-HHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHH
T ss_pred HhcccChHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 9888888776 89999999999999999999999999998764
No 7
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2e-88 Score=743.98 Aligned_cols=404 Identities=22% Similarity=0.380 Sum_probs=371.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
..+..|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 22 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 95 (553)
T 3ko1_A 22 GSSRTYG--KEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPA----AKLLVQIAKG 95 (553)
T ss_dssp ------C--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHH----HHHHHHHHHT
T ss_pred Ccccchh--HHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChh----HHHHHHHhhC
Confidence 3567788 899999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC--ch-hHHHHHhhhcCC----
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~---- 215 (532)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 96 qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~ 175 (553)
T 3ko1_A 96 QDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVA 175 (553)
T ss_dssp CSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCC
T ss_pred CcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999987 45 899999999875
Q ss_pred --hhhHhHHHHHHHHhhccC--Cc-------eEEe--cCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009575 216 --NYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (532)
Q Consensus 216 --~~~is~li~eA~~~vg~~--g~-------I~v~--~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIl 282 (532)
+++|++|++||+.+++++ |+ |+++ +|++++|+ ++++||+|+++|.||+ |+++++||+|+
T Consensus 176 ~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIl 247 (553)
T 3ko1_A 176 GAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPG-------MPKRLENAKIA 247 (553)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTT-------SCSCCBSCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCC-------CccccccceEE
Confidence 799999999999999986 76 7774 78899999 8999999999999997 46679999999
Q ss_pred eeccc-------------CCCHHH-----------HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEee
Q 009575 283 LVDKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (532)
Q Consensus 283 l~d~~-------------I~~~~e-----------l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk 338 (532)
++|++ |+++++ +.++++++.+.|+||||++++|+++++++|.++ +|++|+
T Consensus 248 l~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~------gI~~v~ 321 (553)
T 3ko1_A 248 LIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKK------GVLAVR 321 (553)
T ss_dssp EECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHH------TCEEEC
T ss_pred EecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhc------chhhhh
Confidence 99994 677776 466789999999999999999999999999865 345665
Q ss_pred CCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHH
Q 009575 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (532)
Q Consensus 339 ~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~g~~~~~~i~~r~~~i~~~l~ 415 (532)
++++++|+|||++|||++++ +++++++++||+|+.|++. +++|+||.||+++
T Consensus 322 -----~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~--------------- 376 (553)
T 3ko1_A 322 -----RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP--------------- 376 (553)
T ss_dssp -----CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS---------------
T ss_pred -----hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCC---------------
Confidence 66799999999999999999 5899999999999999964 8899999999864
Q ss_pred hhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccC
Q 009575 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (532)
Q Consensus 416 ~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (532)
..+||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++
T Consensus 377 --------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 436 (553)
T 3ko1_A 377 --------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQV 436 (553)
T ss_dssp --------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHH
T ss_pred --------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhcccc
Confidence 589999999999999999999999999999999999 99999999999999999998888
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 437 ~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 473 (553)
T 3ko1_A 437 GGKEQ-LAVEAYANALESLVSILIENAGFDPIDLLMKL 473 (553)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred CChhH-hHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHH
Confidence 88777 89999999999999999999999999998764
No 8
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=3.4e-88 Score=737.40 Aligned_cols=402 Identities=22% Similarity=0.315 Sum_probs=373.6
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCC--CCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009575 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKY--GAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (532)
Q Consensus 64 k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~--g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~ 141 (532)
.+-.|| .++|..|+.|++.|+++|++||||+||||||++++ |+|+|||||+||||+|+++||. |||++++|+
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~ 76 (513)
T 3iyg_B 3 ADEERA--ETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSR 76 (513)
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHH
Confidence 455688 99999999999999999999999999999999999 9999999999999999999997 999999999
Q ss_pred ccccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC-----ch-hHHHHHhhhcC-
Q 009575 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAG- 214 (532)
Q Consensus 142 ~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~-----~~-~l~~va~ts~~- 214 (532)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||++
T Consensus 77 ~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslss 156 (513)
T 3iyg_B 77 VQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSS 156 (513)
T ss_pred HhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999987 34 89999998864
Q ss_pred -----ChhhHhHHHHHHHHhhccC---CceEEe--cCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009575 215 -----NNYEVGNMIAEAMSKVGRK---GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (532)
Q Consensus 215 -----~~~~is~li~eA~~~vg~~---g~I~v~--~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~ 284 (532)
++++|++|++||+.+++++ ++|+++ +|++++|| ++++||+|+++|.+| |+++++||+|+++
T Consensus 157 K~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~ 227 (513)
T 3iyg_B 157 KLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIA 227 (513)
T ss_pred cccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEE
Confidence 5789999999999999987 778774 69999999 999999999999886 6788999999999
Q ss_pred cc--------------cCCCHHHHHH-----------HHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeC
Q 009575 285 DK--------------KITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (532)
Q Consensus 285 d~--------------~I~~~~el~~-----------~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~ 339 (532)
|+ +|++++++.+ +++++++.|+||||++++|+++++++|..+ +|+||+.
T Consensus 228 ~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~ 301 (513)
T 3iyg_B 228 NTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEH 301 (513)
T ss_pred cCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEec
Confidence 98 3667777654 689999999999999999999999999875 6799998
Q ss_pred CCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHh
Q 009575 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (532)
Q Consensus 340 ~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~ 416 (532)
|+ +.+|+|||++|||++++ +++++++++||+|++|+ ++++++++|.||++
T Consensus 302 ~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------- 354 (513)
T 3iyg_B 302 AD-----FVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL----------------- 354 (513)
T ss_pred CC-----HHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCC-----------------
Confidence 87 47899999999999999 58999999999999998 67889999999875
Q ss_pred hhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCC
Q 009575 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (532)
Q Consensus 417 ~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~ 495 (532)
+++|||+|||+|+.+++|+||+++||||++|++++++ +|||||++|++++++|++++.+++
T Consensus 355 ------------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~ 416 (513)
T 3iyg_B 355 ------------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTP 416 (513)
T ss_pred ------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccC
Confidence 4699999999999999999999999999999999995 999999999999999999988888
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 496 ~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 417 g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 452 (513)
T 3iyg_B 417 GKEA-VAMESYAKALRMLPTIIADNAGYDSADLVAQL 452 (513)
T ss_pred cHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 8776 89999999999999999999999999998764
No 9
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.6e-88 Score=743.25 Aligned_cols=404 Identities=24% Similarity=0.367 Sum_probs=378.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
.+++.|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 15 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 88 (548)
T 1q3q_A 15 GTQRYVG--RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AKMMVEVAKT 88 (548)
T ss_dssp TCEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHH
T ss_pred Ccceech--HHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 5778999 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc--h-hHHHHHhhhc------
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSA------ 213 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~------ 213 (532)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. . +|.++|+||+
T Consensus 89 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~ 168 (548)
T 1q3q_A 89 QDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAE 168 (548)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 4 8999999875
Q ss_pred CChhhHhHHHHHHHHhhccC--C-------ceEEe--cCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009575 214 GNNYEVGNMIAEAMSKVGRK--G-------VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (532)
Q Consensus 214 ~~~~~is~li~eA~~~vg~~--g-------~I~v~--~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIl 282 (532)
+++++|++|++||+.+++++ | +|+++ +|++++|| ++++||+|+++|.||+| +++++||+|+
T Consensus 169 ~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 240 (548)
T 1q3q_A 169 SHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM-------PKRVENAKIA 240 (548)
T ss_dssp GGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS-------CSEESSEEEE
T ss_pred cchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCCC-------cceecCCEEE
Confidence 35799999999999999876 4 68876 99999999 99999999999999985 4678999999
Q ss_pred eeccc-------------CCCHHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEee
Q 009575 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (532)
Q Consensus 283 l~d~~-------------I~~~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk 338 (532)
++|++ |++++++ .++++++.+.|+||||++++|+++|+++|++|+ |+||+
T Consensus 241 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~ 314 (548)
T 1q3q_A 241 LINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVR 314 (548)
T ss_dssp EECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEEC
T ss_pred EEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEc
Confidence 99998 7788875 788999999999999999999999999999984 57764
Q ss_pred CCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHH
Q 009575 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (532)
Q Consensus 339 ~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~g~~~~~~i~~r~~~i~~~l~ 415 (532)
++++++|+|||++|||++++ +++++++++||+|+.|++. +++|++|.||++
T Consensus 315 -----~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 368 (548)
T 1q3q_A 315 -----RVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKN---------------- 368 (548)
T ss_dssp -----SCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSS----------------
T ss_pred -----cCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC----------------
Confidence 78899999999999999998 5899999999999999864 889999999876
Q ss_pred hhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccC
Q 009575 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (532)
Q Consensus 416 ~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (532)
+++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++++|++++.++
T Consensus 369 -------------------~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~ 429 (548)
T 1q3q_A 369 -------------------PKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQV 429 (548)
T ss_dssp -------------------CSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhc
Confidence 3689999999999999999999999999999999999 99999999999999999998777
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 430 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 466 (548)
T 1q3q_A 430 GGKEA-LAIENFADALKIIPKTLAENAGLDTVEMLVKV 466 (548)
T ss_dssp CHHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCcHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 67665 89999999999999999999999999998764
No 10
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.2e-88 Score=735.34 Aligned_cols=400 Identities=20% Similarity=0.307 Sum_probs=368.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.+++..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (515)
T 3iyg_H 10 IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDAEVGDGT 85 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhceeCcch
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC--c----h-hHHHHHhhhcC------Chhh
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--D----S-ELADVAAVSAG------NNYE 218 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~----~-~l~~va~ts~~------~~~~ 218 (532)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ + . .|.++|+||++ ++++
T Consensus 86 TtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~ 165 (515)
T 3iyg_H 86 TSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAF 165 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHH
Confidence 99999999999999999999999999999999999999999999999985 4 3 56999999874 6799
Q ss_pred HhHHHHHHHHhhccC---CceEEe--cCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc------
Q 009575 219 VGNMIAEAMSKVGRK---GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (532)
Q Consensus 219 is~li~eA~~~vg~~---g~I~v~--~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~------ 287 (532)
|++|++||+.+++.+ ++|+++ +|++++|+ ++++||+|+++|.||||+++ |.+++||+|+++|++
T Consensus 166 i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~~----p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 166 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEMQ----PKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred HHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCcccccC----CccccccEEEEEccccccccc
Confidence 999999999999876 777774 68899999 99999999999999999754 457999999999995
Q ss_pred -------CCCHHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhh
Q 009575 288 -------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (532)
Q Consensus 288 -------I~~~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~ 349 (532)
|++++++ .++++++.+.|+||||++++|++.++++|.++ |+ + .++++++++
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~---gI---~-----~v~~~~k~~ 309 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR---DM---F-----CAGRVPEED 309 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc---CC---c-----ccccccHHH
Confidence 6777776 56799999999999999999999888888643 33 3 456889999
Q ss_pred HHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHH
Q 009575 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (532)
Q Consensus 350 L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l 426 (532)
|+|||++|||++++ +++++++++||+|+.|++. ++++++|.||+++
T Consensus 310 leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------------------------- 358 (515)
T 3iyg_H 310 LKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA-------------------------- 358 (515)
T ss_pred HHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC--------------------------
Confidence 99999999999999 5899999999999999864 7899999998763
Q ss_pred HHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHH
Q 009575 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (532)
Q Consensus 427 ~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (532)
..|||+|||+|+.+++|+||+++||||++|++++++ +|||||++|++++.+|++++.++++.+| +++++
T Consensus 359 ---------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 428 (515)
T 3iyg_H 359 ---------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQ-LLIGA 428 (515)
T ss_pred ---------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHH-HHHHH
Confidence 589999999999999999999999999999999985 9999999999999999999888888777 89999
Q ss_pred HHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 506 VKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 506 ~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++||+.||++||+|||+|+.+++.+|
T Consensus 429 ~a~ALe~ip~~La~NaG~d~~~~v~~l 455 (515)
T 3iyg_H 429 YAKALEIIPRQLCDNAGFDATNILNKL 455 (515)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 999999999999999999999998764
No 11
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=3.6e-88 Score=741.47 Aligned_cols=403 Identities=26% Similarity=0.380 Sum_probs=373.8
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhcc
Q 009575 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (532)
Q Consensus 64 k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~ 143 (532)
.+..+| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++|
T Consensus 12 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 85 (543)
T 3ruv_A 12 MKRYMG--RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLIEVAKTQ 85 (543)
T ss_dssp EEEEET--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHHHHHHHH
T ss_pred cchhcc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHH
Confidence 456677 899999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC--ch-hHHHHHhhhcCC-----
Q 009575 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN----- 215 (532)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~----- 215 (532)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 86 d~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~ 165 (543)
T 3ruv_A 86 EKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEK 165 (543)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGG
T ss_pred HhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccch
Confidence 9999999999999999999999999999999999999999999999999999999988 45 899999999864
Q ss_pred -hhhHhHHHHHHHHhhccC-Cc-----eEEe--cCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecc
Q 009575 216 -NYEVGNMIAEAMSKVGRK-GV-----VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK 286 (532)
Q Consensus 216 -~~~is~li~eA~~~vg~~-g~-----I~v~--~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~ 286 (532)
+++|++|++||+.+++++ |. |+++ +|++++|+ ++++||+|+++|.||| |+++++||+|+++|+
T Consensus 166 ~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~~n~kIll~~~ 237 (543)
T 3ruv_A 166 AKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQ-------MPKKVTDAKIALLNC 237 (543)
T ss_dssp CCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTT-------SCSEEEEEEEEEESS
T ss_pred hHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCcc-------ccccccCcEEEEEcc
Confidence 799999999999999987 75 7764 78899999 8999999999999997 467899999999999
Q ss_pred c-------------CCCHHH-----------HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCC
Q 009575 287 K-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGF 342 (532)
Q Consensus 287 ~-------------I~~~~e-----------l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~ 342 (532)
+ |+++++ +.++++++++.|+||||++++|+++++++|+++ +|++|+
T Consensus 238 ~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~~v~---- 307 (543)
T 3ruv_A 238 AIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE------GIVAAR---- 307 (543)
T ss_dssp CBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT------TCEEEC----
T ss_pred cccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc------CcEEEe----
Confidence 5 566665 567789999999999999999999999999864 346665
Q ss_pred CccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhh
Q 009575 343 GERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQ 419 (532)
Q Consensus 343 g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~ 419 (532)
++++++|+|||++|||++++ +++++++++||+|+.|++. +++|++|.+|+++
T Consensus 308 -~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------------- 362 (543)
T 3ruv_A 308 -RVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHP------------------- 362 (543)
T ss_dssp -SCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC-------------------
T ss_pred -eCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCC-------------------
Confidence 66799999999999999999 5899999999999999864 8899999999864
Q ss_pred HHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChh
Q 009575 420 DYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDE 498 (532)
Q Consensus 420 ~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~e 498 (532)
..+||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++++.+
T Consensus 363 ----------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~e 426 (543)
T 3ruv_A 363 ----------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGRE 426 (543)
T ss_dssp ----------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTH
T ss_pred ----------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHH
Confidence 479999999999999999999999999999999999 999999999999999999998888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 499 EKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 499 q~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 427 q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 459 (543)
T 3ruv_A 427 Q-LAVRAFADALEVIPRTLAENAGLDAIEILVKV 459 (543)
T ss_dssp H-HHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 7 89999999999999999999999999998764
No 12
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=7.4e-88 Score=739.35 Aligned_cols=404 Identities=23% Similarity=0.363 Sum_probs=372.5
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
..++.|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 13 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 86 (543)
T 1a6d_B 13 GTKRESG--KDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----AKMMVEVSKT 86 (543)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----HHHHHHHHTC
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 3568899 899999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc--h-hHHHHHhhhc------
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSA------ 213 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~------ 213 (532)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. . +|.++|+||+
T Consensus 87 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~ 166 (543)
T 1a6d_B 87 QDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSAS 166 (543)
T ss_dssp TTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999974 3 8999999774
Q ss_pred CChhhHhHHHHHHHHhhccC--Cc-------eEEe--cCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009575 214 GNNYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (532)
Q Consensus 214 ~~~~~is~li~eA~~~vg~~--g~-------I~v~--~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIl 282 (532)
+++++|++|++||+.+++++ |. |+++ +|++++|| ++++||+|+++|.||+| +++++||+|+
T Consensus 167 ~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 238 (543)
T 1a6d_B 167 VAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGM-------PDVVKDAKIA 238 (543)
T ss_dssp GGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCCC-------cceecCCeEE
Confidence 35799999999999999986 63 7775 99999999 99999999999999985 5678999999
Q ss_pred eeccc-------------CCCHHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEee
Q 009575 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (532)
Q Consensus 283 l~d~~-------------I~~~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk 338 (532)
++|++ |++++++ .++++++.+.|+||||++++|+++|+++|++|+ |+||+
T Consensus 239 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~ 312 (543)
T 1a6d_B 239 LLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAVR 312 (543)
T ss_dssp EESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEEC
T ss_pred EEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEec
Confidence 99998 7777775 788999999999999999999999999999984 57774
Q ss_pred CCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHH
Q 009575 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (532)
Q Consensus 339 ~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~ 415 (532)
++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|.||++
T Consensus 313 -----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 366 (543)
T 1a6d_B 313 -----RVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKN---------------- 366 (543)
T ss_dssp -----SCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESS----------------
T ss_pred -----cCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC----------------
Confidence 78899999999999999998 589999999999999986 4889999999876
Q ss_pred hhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccC
Q 009575 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (532)
Q Consensus 416 ~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (532)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++
T Consensus 367 -------------------~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~ 427 (543)
T 1a6d_B 367 -------------------PKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKI 427 (543)
T ss_dssp -------------------SSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHT
T ss_pred -------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhc
Confidence 3689999999999999999999999999999999999 99999999999999999999888
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 428 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 464 (543)
T 1a6d_B 428 GGRQQ-LAIEKFADAIEEIPRALAENAGLDPIDILLKL 464 (543)
T ss_dssp CSSHH-HHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHH
T ss_pred CChHH-HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 88776 89999999999999999999999999998764
No 13
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=4.6e-88 Score=740.86 Aligned_cols=403 Identities=23% Similarity=0.362 Sum_probs=374.8
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
..++.|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 14 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 87 (545)
T 1a6d_A 14 GTQREQG--KNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----AKMIVEVSKA 87 (545)
T ss_dssp ---CEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----HHHHHGGGGC
T ss_pred cchhhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----HHHHHHHHHh
Confidence 3568888 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC-ch-hHHHHHhhhc------C
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSA------G 214 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~-~~-~l~~va~ts~------~ 214 (532)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++| + +. +|.++|+||+ +
T Consensus 88 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~ 166 (545)
T 1a6d_A 88 QDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGL 166 (545)
T ss_dssp TTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCS
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999 7 45 8999999875 4
Q ss_pred ChhhHhHHHHHHHHhhccC---------CceEEe--cCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEee
Q 009575 215 NNYEVGNMIAEAMSKVGRK---------GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (532)
Q Consensus 215 ~~~~is~li~eA~~~vg~~---------g~I~v~--~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll 283 (532)
++++|++|++||+.+++++ ++|+++ +|++++|| ++++||+|+++|.||+| +++++||+|++
T Consensus 167 ~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll 238 (545)
T 1a6d_A 167 SNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM-------PDVVKNAKIAL 238 (545)
T ss_dssp THHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTTS-------CSEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCCC-------cceecCCEEEE
Confidence 6799999999999999876 378886 99999999 99999999999999985 46789999999
Q ss_pred eccc-------------CCCHHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeC
Q 009575 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (532)
Q Consensus 284 ~d~~-------------I~~~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~ 339 (532)
+|++ |++++++ .++++++.+.|+||||++++|+++|+++|++|+ |+||+
T Consensus 239 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~- 311 (545)
T 1a6d_A 239 IDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR- 311 (545)
T ss_dssp ECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC-
T ss_pred EecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec-
Confidence 9998 6777765 788999999999999999999999999999984 57774
Q ss_pred CCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHh
Q 009575 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (532)
Q Consensus 340 ~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~g~~~~~~i~~r~~~i~~~l~~ 416 (532)
++++++|+|||++|||++++ +++++++++||+|+.|++. +++|++|.+|++
T Consensus 312 ----~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------- 365 (545)
T 1a6d_A 312 ----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN----------------- 365 (545)
T ss_dssp ----SCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESC-----------------
T ss_pred ----cCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC-----------------
Confidence 78899999999999999998 5899999999999999864 789999999876
Q ss_pred hhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCC
Q 009575 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (532)
Q Consensus 417 ~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~ 495 (532)
+++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++++|++++.+++
T Consensus 366 ------------------~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~ 427 (545)
T 1a6d_A 366 ------------------PKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVG 427 (545)
T ss_dssp ------------------SSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSC
T ss_pred ------------------CceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccC
Confidence 3699999999999999999999999999999999999 999999999999999999988777
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 496 ~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 428 g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 463 (545)
T 1a6d_A 428 GREQ-LAIEAFAKALEIIPRTLAENAGIDPINTLIKL 463 (545)
T ss_dssp HHHH-HHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHH
T ss_pred ccHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 7665 89999999999999999999999999998764
No 14
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=6.9e-89 Score=744.86 Aligned_cols=408 Identities=21% Similarity=0.307 Sum_probs=374.9
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
.|+..|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~ 84 (528)
T 3p9d_D 11 FKNKEKP--QEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAA 84 (528)
T ss_dssp SCBCCCH--HHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHH
T ss_pred cchhcch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHH
Confidence 5888999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC--ch-hHHHHHhhhcCC----
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~---- 215 (532)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~ 164 (528)
T 3p9d_D 85 QDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVS 164 (528)
T ss_dssp HHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCS
T ss_pred hhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999998 45 899999999874
Q ss_pred --hhhHhHHHHHHHHhhcc--CCceEE-------ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009575 216 --NYEVGNMIAEAMSKVGR--KGVVTL-------EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (532)
Q Consensus 216 --~~~is~li~eA~~~vg~--~g~I~v-------~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~ 284 (532)
+++|++|++||+.++++ +|.|.+ .+|++++|| ++++||+|+++|.||+| |+++++||+|+++
T Consensus 165 ~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~ 237 (528)
T 3p9d_D 165 QYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLI 237 (528)
T ss_dssp TTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEE
T ss_pred hhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEE
Confidence 79999999999999987 454433 359999999 99999999999999986 7889999999999
Q ss_pred cccCC-------------CHHH-----------HHHHHHHHHhcCCCeEEEcccc-----cHHHHHHHHHhhhcccceEE
Q 009575 285 DKKIT-------------NARD-----------LINVLEDAIRGAYPILIIAEDI-----EQEALATLVVNKLRGALKIA 335 (532)
Q Consensus 285 d~~I~-------------~~~e-----------l~~~le~i~~~g~~lvIia~~I-----~~~al~~L~~n~~~g~~~i~ 335 (532)
|++|+ ++++ +.++++++.+.|+||||++++| +++++++|.+| +|+
T Consensus 238 ~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~------~I~ 311 (528)
T 3p9d_D 238 QFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKL------NIM 311 (528)
T ss_dssp CCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTT------SCC
T ss_pred eccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHc------CcE
Confidence 99875 4443 6888999999999999999999 99999999876 467
Q ss_pred EeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHH
Q 009575 336 ALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRT 412 (532)
Q Consensus 336 aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~ 412 (532)
||+ ++++++|+|||++|||+++++ ++++++++||+|+.|++ +++++++|.+|....
T Consensus 312 av~-----~~~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~----------- 370 (528)
T 3p9d_D 312 VVK-----DIEREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN----------- 370 (528)
T ss_dssp EEE-----CCCTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-----------
T ss_pred EEE-----eCCHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-----------
Confidence 777 667899999999999999994 78899999999999984 567888898876210
Q ss_pred HHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHh
Q 009575 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (532)
Q Consensus 413 ~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~ 491 (532)
.+++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++.+|++++
T Consensus 371 ---------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~ 429 (528)
T 3p9d_D 371 ---------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEA 429 (528)
T ss_dssp ---------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCC
T ss_pred ---------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHh
Confidence 15799999999999999999999999999999999999 99999999999999999998
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 492 ~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
.++++.+| +++++|++||+.||++||+|||+||.+++.+|
T Consensus 430 ~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l 469 (528)
T 3p9d_D 430 RSMEGVQA-FIWQEFASALEVIPTTLAENAGLNSIKVVTEL 469 (528)
T ss_dssp TTSCHHHH-TTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHH
T ss_pred hccChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 77777666 89999999999999999999999999998764
No 15
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.3e-87 Score=731.20 Aligned_cols=408 Identities=22% Similarity=0.302 Sum_probs=373.1
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhcc
Q 009575 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (532)
Q Consensus 64 k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~ 143 (532)
.+-.|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++|
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~q 76 (529)
T 3iyg_A 3 GDRSTG--EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQ 76 (529)
T ss_pred cchhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHh
Confidence 345677 899999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHh-cccccC--ch-hHHHHHhhhcC-----
Q 009575 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVE--DS-ELADVAAVSAG----- 214 (532)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~-~s~~v~--~~-~l~~va~ts~~----- 214 (532)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++ +. +|.++|+||++
T Consensus 77 d~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~ 156 (529)
T 3iyg_A 77 DKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIG 156 (529)
T ss_pred hhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCccc
Confidence 9999999999999999999999999999999999999999999999999999 999987 44 89999999975
Q ss_pred -ChhhHhHHHHHHHHhhc---cCC-----c--eEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeE
Q 009575 215 -NNYEVGNMIAEAMSKVG---RKG-----V--VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKL 281 (532)
Q Consensus 215 -~~~~is~li~eA~~~vg---~~g-----~--I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkI 281 (532)
++++|++|++||+.+++ ++| + |++ .+|++++|| ++++||+|+++|.||+ |+..++||||
T Consensus 157 ~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kI 228 (529)
T 3iyg_A 157 INGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQG-------MPKRIVNAKI 228 (529)
T ss_pred ccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCccccc-------CCcccCCceE
Confidence 57999999999999998 344 2 554 589999999 8999999999999997 4557899999
Q ss_pred eeecccC-------------CCHHH-----------HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEe
Q 009575 282 LLVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAAL 337 (532)
Q Consensus 282 ll~d~~I-------------~~~~e-----------l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aV 337 (532)
+++|+++ +++++ +.++++++++.|+||||++++|+++++++|++|+ |+||
T Consensus 229 lll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av 302 (529)
T 3iyg_A 229 ACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAV 302 (529)
T ss_pred EEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Ccee
Confidence 9999975 34433 5678899999999999999999999999999984 5666
Q ss_pred eCCCCCccchhhHHHHHHHhCCeEeecCCCcc-ccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHH
Q 009575 338 KAPGFGERKSQYLDDIAILTGGTVIRDEVGLA-LDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTL 413 (532)
Q Consensus 338 k~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~-l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~ 413 (532)
+ ++++++|+|||++|||+++++..+++ .+++++++||+|+.|+ ++++++++|.||+++
T Consensus 303 ~-----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------------- 364 (529)
T 3iyg_A 303 R-----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR------------- 364 (529)
T ss_pred c-----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC-------------
Confidence 6 67899999999999999999765554 3557789999999998 789999999998763
Q ss_pred HHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhc
Q 009575 414 IENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKE 492 (532)
Q Consensus 414 l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~ 492 (532)
++|||+|||+|+.+++|.||+++||+|++|+++++| +||||||+||+++.+|++++.
T Consensus 365 ----------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~ 422 (529)
T 3iyg_A 365 ----------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYAT 422 (529)
T ss_pred ----------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhh
Confidence 589999999999999999999999999999999999 999999999999999999998
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 493 TLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 493 ~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 423 ~~~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l 461 (529)
T 3iyg_A 423 SMGSREQ-LAIAEFARSLLVIPNTLAVNAAQDSTDLVAKL 461 (529)
T ss_pred hcCChHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 8888887 89999999999999999999999999998764
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-86 Score=726.38 Aligned_cols=403 Identities=22% Similarity=0.338 Sum_probs=368.1
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhcc
Q 009575 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (532)
Q Consensus 64 k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~ 143 (532)
++-.|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~q 76 (515)
T 3iyg_E 3 KSRLMG--LEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQ 76 (515)
T ss_pred chhhch--HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHh
Confidence 445688 999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc----h-hHHHHHhhhcCC---
Q 009575 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN--- 215 (532)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~----~-~l~~va~ts~~~--- 215 (532)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. . +|.++|+||+++
T Consensus 77 d~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i 156 (515)
T 3iyg_E 77 DDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVV 156 (515)
T ss_pred hhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccch
Confidence 99999999999999999999999999999999999999999999999999999998854 3 899999999875
Q ss_pred ---hhhHhHHHHHHHHhhccC-------CceEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEee
Q 009575 216 ---NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (532)
Q Consensus 216 ---~~~is~li~eA~~~vg~~-------g~I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll 283 (532)
.+.|+++++||+..+.+. +.|++ .+|++++|+ ++++||+|+++|.||||++ .++||+|++
T Consensus 157 ~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m~~-------~~~~~kIal 228 (515)
T 3iyg_E 157 NSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQMPK-------QVEDAKIAI 228 (515)
T ss_pred hHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEecccccccccc-------cCCCceEEE
Confidence 578999999999998652 34555 579999999 9999999999999998654 467888888
Q ss_pred eccc-------------CCCHHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeC
Q 009575 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (532)
Q Consensus 284 ~d~~-------------I~~~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~ 339 (532)
++++ |++++++ .++++++.+.|+||||++++|+++|+++|++|++ .+++
T Consensus 229 l~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I------~~v~- 301 (515)
T 3iyg_E 229 LTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDL------PAVR- 301 (515)
T ss_pred EcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCC------EEEe-
Confidence 7775 4566665 6789999999999999999999999999999854 5555
Q ss_pred CCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE-----eCceEEEEcCCCChhhHHHHHHHHHHHH
Q 009575 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIRTLI 414 (532)
Q Consensus 340 ~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i-----~~~~~~~i~g~~~~~~i~~r~~~i~~~l 414 (532)
++++++|+|||++|||++++ +++++++++||+|++|++ +++++++|.||+++
T Consensus 302 ----~v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~-------------- 358 (515)
T 3iyg_E 302 ----WVGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS-------------- 358 (515)
T ss_pred ----ccCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC--------------
Confidence 44589999999999999999 589999999999999987 45899999999863
Q ss_pred HhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhcc
Q 009575 415 ENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKET 493 (532)
Q Consensus 415 ~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~ 493 (532)
..|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+
T Consensus 359 ---------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~ 417 (515)
T 3iyg_E 359 ---------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADK 417 (515)
T ss_pred ---------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhcc
Confidence 478999999999999999999999999999999999 9999999999999999999888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 494 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 494 ~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 418 ~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 455 (515)
T 3iyg_E 418 CPTLEQ-YAMRAFADALEVIPMALAENSGMNPIQTMTEV 455 (515)
T ss_pred CCcHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 888777 89999999999999999999999999998764
No 17
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-86 Score=725.27 Aligned_cols=402 Identities=22% Similarity=0.308 Sum_probs=367.9
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccc
Q 009575 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (532)
Q Consensus 65 ~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d 144 (532)
+-.+| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++||
T Consensus 5 ~~~~g--~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd 78 (518)
T 3iyg_D 5 DRDKP--AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQD 78 (518)
T ss_pred cchhh--HHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhh
Confidence 33456 789999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC--ch-hHHHHHhhhcCCh-----
Q 009575 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGNN----- 216 (532)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~~----- 216 (532)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||++++
T Consensus 79 ~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~ 158 (518)
T 3iyg_D 79 IEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQY 158 (518)
T ss_pred hhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhh
Confidence 999999999999999999999999999999999999999999999999999999998 44 8999999999874
Q ss_pred -hhHhHHHHHHHHhhcc---CCc-----eEEe--cCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeec
Q 009575 217 -YEVGNMIAEAMSKVGR---KGV-----VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD 285 (532)
Q Consensus 217 -~~is~li~eA~~~vg~---~g~-----I~v~--~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d 285 (532)
++|++|++||+.++++ +|. |+++ +|+++.|+ ++++||+|+++|.| . ||..++||+|++++
T Consensus 159 ~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~ 229 (518)
T 3iyg_D 159 SSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQ 229 (518)
T ss_pred HHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEE
Confidence 8999999999999985 554 6664 78999999 89999999999987 2 45567889999888
Q ss_pred ccC-------------CCHH-----------HHHHHHHHHHhcCCCeEEE-----cccccHHHHHHHHHhhhcccceEEE
Q 009575 286 KKI-------------TNAR-----------DLINVLEDAIRGAYPILII-----AEDIEQEALATLVVNKLRGALKIAA 336 (532)
Q Consensus 286 ~~I-------------~~~~-----------el~~~le~i~~~g~~lvIi-----a~~I~~~al~~L~~n~~~g~~~i~a 336 (532)
+++ ++++ ++.++++++.+.|+||||+ +++|+++|+++|+++ +|+|
T Consensus 230 ~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~a 303 (518)
T 3iyg_D 230 FCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMV 303 (518)
T ss_pred eeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEE
Confidence 864 4454 3678899999999999999 899999999999987 5799
Q ss_pred eeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eC-ceEEEEcCCCChhhHHHHHHHHHH
Q 009575 337 LKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TK-DTTTIVGDGSTQDAVSKRVAQIRT 412 (532)
Q Consensus 337 Vk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~-~~~~~i~g~~~~~~i~~r~~~i~~ 412 (532)
|+.|+ +.+|+|||++|||++++ +++++++++||+|+.|++ ++ +++++|++|++
T Consensus 304 v~~~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~------------- 360 (518)
T 3iyg_D 304 VKDIE-----REDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS------------- 360 (518)
T ss_pred EecCC-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC-------------
Confidence 99887 47899999999999999 489999999999999986 34 68899999864
Q ss_pred HHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHh
Q 009575 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (532)
Q Consensus 413 ~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~ 491 (532)
++++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++.+|++++
T Consensus 361 ---------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~ 419 (518)
T 3iyg_D 361 ---------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYS 419 (518)
T ss_pred ---------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHh
Confidence 25799999999999999999999999999999999999 99999999999999999998
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 492 ~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
.++++.+| +++++|++||+.||++||+|||+||.+++.+|
T Consensus 420 ~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 459 (518)
T 3iyg_D 420 RTLSGMES-YCIRAFADAMEVIPSTLAENAGLNPISTVTEL 459 (518)
T ss_pred hcCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 88888776 89999999999999999999999999998764
No 18
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=5.9e-88 Score=738.06 Aligned_cols=403 Identities=23% Similarity=0.335 Sum_probs=371.6
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeec-CCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLES-KYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~-~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~ 141 (532)
.+++.|| .++|..|+.|++.|+++|++||||+||||||++ ++|+|+|||||+||||+|+++||. |||++++|+
T Consensus 9 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~ 82 (527)
T 3p9d_B 9 QVTEERA--ENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISK 82 (527)
T ss_dssp CEEEEES--HHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHH
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHH
Confidence 5789999 999999999999999999999999999999999 899999999999999999999997 999999999
Q ss_pred ccccccCcccchHHHHHHHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHhcccccCc-----h-hHHHHHhhhcC
Q 009575 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAA-GANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG 214 (532)
Q Consensus 142 ~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~-Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~ 214 (532)
+||+++||||||+||||++||+++.+++++ |+||+.|++||++|++.++++|+++++++++ . +|.+||+||++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccc
Confidence 999999999999999999999999999999 9999999999999999999999999999875 4 89999999987
Q ss_pred C------hhhHhHHHHHHHHhhccCC---ceEEe--cCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEee
Q 009575 215 N------NYEVGNMIAEAMSKVGRKG---VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (532)
Q Consensus 215 ~------~~~is~li~eA~~~vg~~g---~I~v~--~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll 283 (532)
+ +++|++|++||+.+++++| +|+++ +|++++|+ ++++||+|+++|.||| |..++||+|++
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~~~~n~kIll 233 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PKRIENAKILI 233 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CSCCSSCEEEE
T ss_pred cCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC--------CeeeecceEEE
Confidence 5 7899999999999999987 77775 69999999 9999999999999996 23468999999
Q ss_pred ecccC--------------CCHHHH-----------HHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEee
Q 009575 284 VDKKI--------------TNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (532)
Q Consensus 284 ~d~~I--------------~~~~el-----------~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk 338 (532)
++++| ++++++ .+.++++++.|+||||++++|+++++++|.++ +|++|+
T Consensus 234 l~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~------~i~av~ 307 (527)
T 3p9d_B 234 ANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDL------GINSIE 307 (527)
T ss_dssp ECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHT------CBCCCC
T ss_pred eccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHC------CCEEEe
Confidence 88763 455554 57889999999999999999999999999987 467887
Q ss_pred CCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHH
Q 009575 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (532)
Q Consensus 339 ~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~ 415 (532)
.|+ +.+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|.||++
T Consensus 308 ~~~-----~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 361 (527)
T 3p9d_B 308 HAD-----FEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA---------------- 361 (527)
T ss_dssp CCH-----HHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC----------------
T ss_pred cCC-----HHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCC----------------
Confidence 655 67899999999999999 48899999999999998 57889999999875
Q ss_pred hhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccC
Q 009575 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (532)
Q Consensus 416 ~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (532)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++
T Consensus 362 -------------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 422 (527)
T 3p9d_B 362 -------------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNI 422 (527)
T ss_dssp -------------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhcc
Confidence 4799999999999999999999999999999999999 99999999999999999998877
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 423 ~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l 459 (527)
T 3p9d_B 423 DGKKS-LAVEAFARALRQLPTILADNAGFDSSELVSKL 459 (527)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHH
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 78776 89999999999999999999999999998764
No 19
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=7.7e-88 Score=739.43 Aligned_cols=405 Identities=19% Similarity=0.291 Sum_probs=370.9
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhcc
Q 009575 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (532)
Q Consensus 64 k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~ 143 (532)
.+-.+| .+++..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++|
T Consensus 17 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~q 90 (550)
T 3p9d_G 17 TDASQG--KGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTLVDISRAQ 90 (550)
T ss_dssp CCEEES--HHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHHHHHHHHH
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHh
Confidence 456678 899999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc-----h-hHHHHHhhhcC---
Q 009575 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG--- 214 (532)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~--- 214 (532)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. . +|.++|+||++
T Consensus 91 d~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~ 170 (550)
T 3p9d_G 91 DAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKL 170 (550)
T ss_dssp HTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTT
T ss_pred hhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999863 4 79999999864
Q ss_pred ---ChhhHhHHHHHHHHhhcc-C------CceEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009575 215 ---NNYEVGNMIAEAMSKVGR-K------GVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (532)
Q Consensus 215 ---~~~~is~li~eA~~~vg~-~------g~I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~ 284 (532)
++++|++|++||+.++++ + +++++ +|++++|| ++++||+|+++|.||||.+ |+..++||+|+++
T Consensus 171 ~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll~ 244 (550)
T 3p9d_G 171 IHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILSL 244 (550)
T ss_dssp TGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEEE
T ss_pred ccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEEeeEEEecccccccccc----CcccccCceEEEe
Confidence 589999999999999995 3 56665 59999999 9999999999999999975 5556999999999
Q ss_pred ccc-------------CCCHHHHH-----------HHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCC
Q 009575 285 DKK-------------ITNARDLI-----------NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (532)
Q Consensus 285 d~~-------------I~~~~el~-----------~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~ 340 (532)
|++ |++++++. ++++++++.|++|||++++|++.++++|.++ +|++
T Consensus 245 ~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~------gI~~---- 314 (550)
T 3p9d_G 245 NVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADR------NIFC---- 314 (550)
T ss_dssp CSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGG------TCEE----
T ss_pred ccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHc------CCcc----
Confidence 998 45665554 4688899999999999999999998887654 3344
Q ss_pred CCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 009575 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (532)
Q Consensus 341 ~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~ 417 (532)
++++++++|++||++|||++++ +++++++++||+|+.|++ +++++++|.||+++
T Consensus 315 -v~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~----------------- 371 (550)
T 3p9d_G 315 -AGRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA----------------- 371 (550)
T ss_dssp -EECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC-----------------
T ss_pred -ccCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC-----------------
Confidence 4578899999999999999999 589999999999999986 68899999998753
Q ss_pred hhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCC
Q 009575 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDN 496 (532)
Q Consensus 418 ~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~ 496 (532)
++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++++
T Consensus 372 ------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g 433 (550)
T 3p9d_G 372 ------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAG 433 (550)
T ss_dssp ------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCS
T ss_pred ------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCCh
Confidence 689999999999999999999999999999999999 9999999999999999999888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 497 DEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 497 ~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 434 ~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l 468 (550)
T 3p9d_G 434 KQQ-MIINAFAKALEVIPRQLCENAGFDAIEILNKL 468 (550)
T ss_dssp TTH-HHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 877 89999999999999999999999999998764
No 20
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.3e-86 Score=731.43 Aligned_cols=410 Identities=23% Similarity=0.349 Sum_probs=370.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhc
Q 009575 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (532)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~ 142 (532)
.++..|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 37 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 110 (562)
T 3p9d_E 37 NKKRQHG--LEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI----AKLLVQLSKS 110 (562)
T ss_dssp CCSCSHH--HHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHH
T ss_pred cceecch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH----HHHHHHHHHH
Confidence 3678899 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc-------hhHHHHHhhhcCC
Q 009575 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-------SELADVAAVSAGN 215 (532)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-------~~l~~va~ts~~~ 215 (532)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. ++|.++|+||+++
T Consensus 111 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~s 190 (562)
T 3p9d_E 111 QDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGS 190 (562)
T ss_dssp HHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSS
T ss_pred HHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999998864 2699999999864
Q ss_pred ------hhhHhHHHHHHHHhhccC-------CceEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeecccee
Q 009575 216 ------NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCK 280 (532)
Q Consensus 216 ------~~~is~li~eA~~~vg~~-------g~I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npk 280 (532)
.++|+++++||+..+.+. +.|++ .+|++++|| ++++||+|+++|.||+|+++.. .+..++||+
T Consensus 191 K~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~k 268 (562)
T 3p9d_E 191 KIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL-PKEGSDGVK 268 (562)
T ss_dssp STTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC------TTCSSCE
T ss_pred chhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-cccccccce
Confidence 578999999999998752 34554 579999999 9999999999999999876432 122347999
Q ss_pred Eeeeccc-------------CCCHHH-----------HHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEE
Q 009575 281 LLLVDKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAA 336 (532)
Q Consensus 281 Ill~d~~-------------I~~~~e-----------l~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~a 336 (532)
|++++++ |+++++ +.++++++++.|+||||++++|+++++++|++|++ .+
T Consensus 269 Iall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I------~~ 342 (562)
T 3p9d_E 269 LAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDL------PA 342 (562)
T ss_dssp ECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTC------CC
T ss_pred EEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCC------EE
Confidence 9998876 345555 57889999999999999999999999999999865 45
Q ss_pred eeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE-----eCceEEEEcCCCChhhHHHHHHHHH
Q 009575 337 LKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIR 411 (532)
Q Consensus 337 Vk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i-----~~~~~~~i~g~~~~~~i~~r~~~i~ 411 (532)
|+ ++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|.||+++
T Consensus 343 v~-----~v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~----------- 401 (562)
T 3p9d_E 343 VR-----WVGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET----------- 401 (562)
T ss_dssp EE-----CCCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC-----------
T ss_pred Ee-----ccCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC-----------
Confidence 55 44689999999999999999 589999999999999997 36899999999863
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHH
Q 009575 412 TLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAI 490 (532)
Q Consensus 412 ~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~ 490 (532)
..|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++++|+++
T Consensus 402 ------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~ 457 (562)
T 3p9d_E 402 ------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEE 457 (562)
T ss_dssp ------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHH
T ss_pred ------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999 9999999999999999999
Q ss_pred hccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 491 KETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 491 ~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
+.++++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 458 ~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l 498 (562)
T 3p9d_E 458 ADKQRGIDQ-YAFRGFAQALDTIPMTLAENSGLDPIGTLSTL 498 (562)
T ss_dssp HHTTCTTHH-HHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHH
T ss_pred hccCccHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 888888777 89999999999999999999999999998764
No 21
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-85 Score=717.03 Aligned_cols=396 Identities=20% Similarity=0.287 Sum_probs=361.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
+++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (512)
T 3iyg_Q 10 EEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQEQEVGDGT 85 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 589999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhc----ccccCch-hHHHHHhhhcCC-----hhhHhH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQM----SKEVEDS-ELADVAAVSAGN-----NYEVGN 221 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~----s~~v~~~-~l~~va~ts~~~-----~~~is~ 221 (532)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++ ++++++. +|.++|+||+++ +++|++
T Consensus 86 TtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 165 (512)
T 3iyg_Q 86 NFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAK 165 (512)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHH
Confidence 999999999999999999999999999999999999999999998 5666666 899999999886 799999
Q ss_pred HHHHHHHhhccC-CceEE-------ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc------
Q 009575 222 MIAEAMSKVGRK-GVVTL-------EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (532)
Q Consensus 222 li~eA~~~vg~~-g~I~v-------~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~------ 287 (532)
|++||+.+++++ |.|.+ .+|+++.|+ ++++||+|+++|.+ |+..++||+|++++++
T Consensus 166 livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~~le~~~~ 235 (512)
T 3iyg_Q 166 LIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYSCPFDGMIT 235 (512)
T ss_pred HHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEecccccccc
Confidence 999999999986 44433 369999888 99999999999865 3445788999988876
Q ss_pred -------CCCHHHHHHH-------HH----HHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhh
Q 009575 288 -------ITNARDLINV-------LE----DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (532)
Q Consensus 288 -------I~~~~el~~~-------le----~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~ 349 (532)
|++++++.++ ++ ++++.|+||||++++|++.++++|.++ +|+||+.|+ +.+
T Consensus 236 e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~-----~~d 304 (512)
T 3iyg_Q 236 ETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNS-----KWD 304 (512)
T ss_pred cccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCC-----HHH
Confidence 4667777665 44 889999999999999999999988653 689999887 467
Q ss_pred HHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHH
Q 009575 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (532)
Q Consensus 350 L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l 426 (532)
|+|||++|||++++ +++++++++||+|++|++ +++++++|.+|+.
T Consensus 305 le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~--------------------------- 352 (512)
T 3iyg_Q 305 LRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE--------------------------- 352 (512)
T ss_pred HHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC---------------------------
Confidence 99999999999999 589999999999999986 4668999998753
Q ss_pred HHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHH
Q 009575 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (532)
Q Consensus 427 ~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (532)
++++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++++.+| +++++
T Consensus 353 -------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 424 (512)
T 3iyg_Q 353 -------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQ-YAIKK 424 (512)
T ss_pred -------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHH-HHHHH
Confidence 35799999999999999999999999999999999999 9999999999999999999888888777 89999
Q ss_pred HHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 506 VKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 506 ~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++||+.||++||+|||+||.+++.+|
T Consensus 425 ~a~ALe~ip~~La~NaG~d~~~~v~~l 451 (512)
T 3iyg_Q 425 FAEAFEAIPRALAENSGVKANEVISKL 451 (512)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 999999999999999999999999764
No 22
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.1e-85 Score=714.48 Aligned_cols=397 Identities=20% Similarity=0.309 Sum_probs=365.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
.++|..|+.|++.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 83 (515)
T 3iyg_G 8 RKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEEVGDGT 83 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccCc--h-hHHHHHhhhcCC------hhhHhHH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGN------NYEVGNM 222 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~~------~~~is~l 222 (532)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. . +|.++|+||+++ .++++++
T Consensus 84 TtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i 163 (515)
T 3iyg_G 84 TSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNI 163 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999875 3 899999999863 4678899
Q ss_pred HHHHHHhhccC--C--------ceEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecc----
Q 009575 223 IAEAMSKVGRK--G--------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK---- 286 (532)
Q Consensus 223 i~eA~~~vg~~--g--------~I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~---- 286 (532)
++||+..+.++ + +|++ .+|++++|| ++++||+|+++|.||. |+++++||+|+++|+
T Consensus 164 ~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 164 ALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred HHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccc
Confidence 99999998732 2 1444 589999999 8999999999999984 778899999999999
Q ss_pred ---------cCCCHHHHHHHHH-----------HHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccc
Q 009575 287 ---------KITNARDLINVLE-----------DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERK 346 (532)
Q Consensus 287 ---------~I~~~~el~~~le-----------~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~ 346 (532)
+|++++++.++++ ++.+.|++|||++++|++.++++|.++ +|+|| ++++
T Consensus 236 ~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av-----~~~~ 304 (515)
T 3iyg_G 236 KKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA------NITAI-----RRVR 304 (515)
T ss_pred cccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC------Cceee-----ccCC
Confidence 4678888877766 899999999999999999999999875 45554 6889
Q ss_pred hhhHHHHHHHhCCeEeecCCCccccCCCCCCCce-eeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHH
Q 009575 347 SQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYE 422 (532)
Q Consensus 347 k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~-~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e 422 (532)
+++|+|||++|||++++ +++++++++||+ |+.|++ ++++++||.||+++
T Consensus 305 k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~---------------------- 357 (515)
T 3iyg_G 305 KTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP---------------------- 357 (515)
T ss_pred HHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCC----------------------
Confidence 99999999999999999 589999999999 999985 46789999999864
Q ss_pred HHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHH
Q 009575 423 REKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKV 501 (532)
Q Consensus 423 ~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~ 501 (532)
..|||+|||+|+.+++|+||+++||||++|++++++ +|||||++|++++.+|++++.++++.+| +
T Consensus 358 -------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq-~ 423 (515)
T 3iyg_G 358 -------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQ-W 423 (515)
T ss_pred -------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHH-H
Confidence 589999999999999999999999999999999776 9999999999999999999888888887 8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 502 GADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 502 ~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++++|++||+.||++||+|||+||.+++.+|
T Consensus 424 ~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l 454 (515)
T 3iyg_G 424 PYRAVAQALEVIPRTLIQNCGASTIRLLTSL 454 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 9999999999999999999999999998764
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.7e-84 Score=705.90 Aligned_cols=400 Identities=23% Similarity=0.371 Sum_probs=359.3
Q ss_pred cccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhcccc
Q 009575 66 LHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTND 145 (532)
Q Consensus 66 i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~ 145 (532)
+..| .+++..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||+
T Consensus 5 ~~~~--~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~ 78 (517)
T 3iyg_Z 5 VARA--QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDD 78 (517)
T ss_pred hhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 3455 889999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC-ch-hHHHHHhhhcCC------hh
Q 009575 146 LAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSAGN------NY 217 (532)
Q Consensus 146 ~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~-~~-~l~~va~ts~~~------~~ 217 (532)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++ .+
T Consensus 79 e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d 158 (517)
T 3iyg_Z 79 ITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELAD 158 (517)
T ss_pred HhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999987 55 899999999864 58
Q ss_pred hHhHHHHHHHHhhccCC------c--eEEecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccC-
Q 009575 218 EVGNMIAEAMSKVGRKG------V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI- 288 (532)
Q Consensus 218 ~is~li~eA~~~vg~~g------~--I~v~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I- 288 (532)
.|+++++||+..+.+.+ . |...+|++.+|| ++++||+|+++|.||+ |+++++||+|+++|++|
T Consensus 159 ~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le 230 (517)
T 3iyg_Z 159 VLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLE 230 (517)
T ss_pred HHHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEeccccc
Confidence 89999999999886532 2 333689999999 8999999999999996 77889999999999986
Q ss_pred ------------CCHHHH-----------HHHHHHHHhcCCC--------e-EEEcccccHHHHHHHHHhhhcccceEEE
Q 009575 289 ------------TNARDL-----------INVLEDAIRGAYP--------I-LIIAEDIEQEALATLVVNKLRGALKIAA 336 (532)
Q Consensus 289 ------------~~~~el-----------~~~le~i~~~g~~--------l-vIia~~I~~~al~~L~~n~~~g~~~i~a 336 (532)
++++++ .+.++++...+.+ + ||++++|+++++++|.++ +|++
T Consensus 231 ~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~ 304 (517)
T 3iyg_Z 231 YEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIA 304 (517)
T ss_pred ccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEE
Confidence 344443 2345666555544 3 566799999999999886 3566
Q ss_pred eeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCC-CceeeEE---EEeCceEEEEcCCCChhhHHHHHHHHHH
Q 009575 337 LKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEV-LGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRT 412 (532)
Q Consensus 337 Vk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~-lG~~~~v---~i~~~~~~~i~g~~~~~~i~~r~~~i~~ 412 (532)
|+ ++++++|+|||++|||++++ +++++++++ ||+|+ | .++++++++|.+|+++
T Consensus 305 v~-----~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~------------ 361 (517)
T 3iyg_Z 305 LR-----RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNP------------ 361 (517)
T ss_pred EE-----ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCc------------
Confidence 66 45689999999999999999 589999999 99999 9 5688999999999864
Q ss_pred HHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHh
Q 009575 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (532)
Q Consensus 413 ~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~ 491 (532)
..|||+|||+|+.+++|+||+++||||++|+++++| +|||||++||+++++|++++
T Consensus 362 -----------------------~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~ 418 (517)
T 3iyg_Z 362 -----------------------RSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYK 418 (517)
T ss_pred -----------------------hhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHh
Confidence 368999999999999999999999999999999999 99999999999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 492 ~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
.++++.+| +++++|++||+.+|+|||+|||+||.+++.+|
T Consensus 419 ~~~~g~eq-~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l 458 (517)
T 3iyg_Z 419 PSVKGRAQ-LGVQAFADALLIIPKVLAQNSGFDLQETLVKV 458 (517)
T ss_pred ccCCHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 88877776 89999999999999999999999999998864
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.2e-84 Score=716.54 Aligned_cols=397 Identities=21% Similarity=0.288 Sum_probs=364.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCccc
Q 009575 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (532)
Q Consensus 72 ~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGT 151 (532)
+++|..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ ||||+++|++||+++||||
T Consensus 25 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 100 (568)
T 3p9d_H 25 DGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA----VKVLVMATEQQKIDMGDGT 100 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH----HHHHHHHHHHHHTTSSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHhhhceeCCCc
Confidence 579999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhccccc----Cch-hHHHHHhhhcC-----ChhhHhH
Q 009575 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV----EDS-ELADVAAVSAG-----NNYEVGN 221 (532)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v----~~~-~l~~va~ts~~-----~~~~is~ 221 (532)
||+||||++||+++.+++++|+||+.|++||++|++.++++|++++.++ ++. +|.++|+||++ ++++|++
T Consensus 101 TtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 180 (568)
T 3p9d_H 101 NLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSE 180 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHH
T ss_pred eehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999876 344 89999999864 4689999
Q ss_pred HHHHHHHhhccC-----C-------ceEEe--cCCCccceeeEEeeeEEeecccCCccccCcccCeeecc---ceeEeee
Q 009575 222 MIAEAMSKVGRK-----G-------VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE---NCKLLLV 284 (532)
Q Consensus 222 li~eA~~~vg~~-----g-------~I~v~--~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~---npkIll~ 284 (532)
|++||+.+++++ | .|+++ +|++++|| ++++||+|+++|. +|+++++ ||||+++
T Consensus 181 livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll 250 (568)
T 3p9d_H 181 LVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKKHKVAVF 250 (568)
T ss_dssp HHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSSCEEEEE
T ss_pred HHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCcceEEEE
Confidence 999999999874 3 46664 69999999 8999999999873 3777888 9999999
Q ss_pred ccc-------------CCCHHHHHH-----------HHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCC
Q 009575 285 DKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (532)
Q Consensus 285 d~~-------------I~~~~el~~-----------~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~ 340 (532)
|++ |++++++.+ +++++.+.|+||||++++|+++++++|.++ +|+||+.|
T Consensus 251 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v 324 (568)
T 3p9d_H 251 TCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRY------GILVLKVP 324 (568)
T ss_dssp CSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCC
T ss_pred ccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC------CeEEEecC
Confidence 998 667777654 788999999999999999999999999987 46899877
Q ss_pred CCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 009575 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (532)
Q Consensus 341 ~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~ 417 (532)
+ +.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|.+|+.
T Consensus 325 ~-----~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------ 376 (568)
T 3p9d_H 325 S-----KFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQG------------------ 376 (568)
T ss_dssp C-----HHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEECBCCCCCSS------------------
T ss_pred C-----HHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCceEEEEecCCC------------------
Confidence 5 78999999999999999 488999999999999975 5689999999862
Q ss_pred hhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHH--cC-ccccCchhhhHHHHHHHHHhccC
Q 009575 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVE--EG-IVVGGGCTLLRLSSKVDAIKETL 494 (532)
Q Consensus 418 ~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~--~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (532)
|++++|||+|||+|+.+++|+||+++||||++|++++ ++ +|||||++||+|+++|++++.++
T Consensus 377 ---------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~ 441 (568)
T 3p9d_H 377 ---------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERT 441 (568)
T ss_dssp ---------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTC
T ss_pred ---------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccC
Confidence 2357999999999999999999999999999999999 65 99999999999999999999888
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 442 ~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l 478 (568)
T 3p9d_H 442 PGLLQ-LAIKQFAVAFEVVPRTLAETAGLDVNEVLPNL 478 (568)
T ss_dssp CSTHH-HHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHH
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 88877 89999999999999999999999999998764
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=5.2e-84 Score=709.30 Aligned_cols=402 Identities=23% Similarity=0.337 Sum_probs=358.5
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccc
Q 009575 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (532)
Q Consensus 65 ~i~f~~~~~~~~~~~~gv~~la~~v~stlGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d 144 (532)
+...| .+++..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 11 ~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd 84 (546)
T 3p9d_F 11 ESLRR--DAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQD 84 (546)
T ss_dssp EEEEH--HHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHH
T ss_pred chhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 44556 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhcccccC----ch-hHHHHHhhhcCC----
Q 009575 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE----DS-ELADVAAVSAGN---- 215 (532)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~----~~-~l~~va~ts~~~---- 215 (532)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 85 ~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~ 164 (546)
T 3p9d_F 85 EITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDA 164 (546)
T ss_dssp HHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHH
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcch
Confidence 999999999999999999999999999999999999999999999999999999985 34 899999999874
Q ss_pred --hhhHhHHHHHHHHhhccC-------CceEE--ecCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009575 216 --NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (532)
Q Consensus 216 --~~~is~li~eA~~~vg~~-------g~I~v--~~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~ 284 (532)
.+.|+++++||+..+.+. ..|.+ .+|++.+|| ++++||+|+++|.||+ |+++++||+|+++
T Consensus 165 ~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~ 236 (546)
T 3p9d_F 165 DLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLIL 236 (546)
T ss_dssp HHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEE
T ss_pred hHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEe
Confidence 578999999999998642 23444 579999999 8999999999999984 7889999999999
Q ss_pred cccCC-------------CHHH-----------HHHHHHHHHhc---------CCC-eEEEcccccHHHHHHHHHhhhcc
Q 009575 285 DKKIT-------------NARD-----------LINVLEDAIRG---------AYP-ILIIAEDIEQEALATLVVNKLRG 330 (532)
Q Consensus 285 d~~I~-------------~~~e-----------l~~~le~i~~~---------g~~-lvIia~~I~~~al~~L~~n~~~g 330 (532)
|++|+ ++++ +.+.++.+... |.| |||++++|+++|+++|++|+
T Consensus 237 ~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g--- 313 (546)
T 3p9d_F 237 NVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN--- 313 (546)
T ss_dssp CCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT---
T ss_pred cCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC---
Confidence 98763 2222 22345666543 455 66777899999999999884
Q ss_pred cceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHH
Q 009575 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRV 407 (532)
Q Consensus 331 ~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~g~~~~~~i~~r~ 407 (532)
|++|+ ++++++|+|||++|||++++ +++++++++||+|+.|+ +++++|+||.||+++
T Consensus 314 ---I~~vr-----~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------- 373 (546)
T 3p9d_F 314 ---ILALR-----RAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP------- 373 (546)
T ss_dssp ---CEEEC-----CCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC-------
T ss_pred ---CeeEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCC-------
Confidence 46666 56789999999999999999 58999999999999994 688999999999874
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHH
Q 009575 408 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSK 486 (532)
Q Consensus 408 ~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~ 486 (532)
..|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+
T Consensus 374 ----------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~ 425 (546)
T 3p9d_F 374 ----------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRY 425 (546)
T ss_dssp ----------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHH
T ss_pred ----------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHH
Confidence 479999999999999999999999999999999999 999999999999999
Q ss_pred HHH---HhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhccC
Q 009575 487 VDA---IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV 532 (532)
Q Consensus 487 L~~---~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~kl 532 (532)
|++ ++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|
T Consensus 426 L~~~~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 473 (546)
T 3p9d_F 426 LRSANMNKLGAKGKTK-TGIEAFAEALLVIPKTLVKNSGFDPLDVLAMV 473 (546)
T ss_dssp HHHHHTTTTTTTSHHH-HHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH
T ss_pred HHhhhhhhhcCchHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 999 4777878776 89999999999999999999999999998764
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.2e-78 Score=660.52 Aligned_cols=368 Identities=23% Similarity=0.364 Sum_probs=296.9
Q ss_pred EeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhccccccCcccchHHHHHHHHHHHHHHHHHcCCCchhHHH
Q 009575 101 VLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 180 (532)
Q Consensus 101 ~I~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~e~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~ 180 (532)
||++++|+|+|||||+||||+|+++||+ ||||+++|++||+++||||||+||||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6888899999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCc--h-hHHHHHhhhc------CChhhHhHHHHHHHHhhccC--Cc--------eEEe--
Q 009575 181 GIEKTSKALVSELKQMSKEVED--S-ELADVAAVSA------GNNYEVGNMIAEAMSKVGRK--GV--------VTLE-- 239 (532)
Q Consensus 181 G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~------~~~~~is~li~eA~~~vg~~--g~--------I~v~-- 239 (532)
||++|++.++++|+++++|++. . +|.++|+||+ +++++|++|++||+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 9999999999999999999874 4 8999999874 46899999999999999876 53 5665
Q ss_pred cCCCccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc-------------CCCHHHH-----------H
Q 009575 240 EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDL-----------I 295 (532)
Q Consensus 240 ~G~~~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~-------------I~~~~el-----------~ 295 (532)
+|++++|| ++++||+|+++|.||+| +++++||+|+++|++ |++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999999 99999999999999974 667999999999998 6677765 8
Q ss_pred HHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCC
Q 009575 296 NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGK 375 (532)
Q Consensus 296 ~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~ 375 (532)
++++++.+.|+||||++++|+++|+++|++|+ |+||+ ++++++|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 89999999999999999999999999999974 57774 78899999999999999998 5899999
Q ss_pred CCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHHHHHH
Q 009575 376 EVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKE 452 (532)
Q Consensus 376 ~~lG~~~~v~i~---~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~~l~E 452 (532)
++||+|+.|++. +++|++|.||++ +++|||+|||+|+.+++|
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~t~~~l~E 337 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQN-----------------------------------SKAVTVLLHGGTEHVVDS 337 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETT-----------------------------------CCCEEEEEEESSHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCC-----------------------------------CceEEEEecCCcHHHHHH
Confidence 999999999974 889999999875 469999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcC-ccccCchhhhHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhcc
Q 009575 453 KKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEK 531 (532)
Q Consensus 453 ~k~~i~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~~p~~La~NAG~d~~~vi~k 531 (532)
+||+++||+|++|+++++| +|||||++|++++++|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+
T Consensus 338 ~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~ 416 (500)
T 3aq1_B 338 LDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQ-LAVSKFAEALEVIPVALAENAGLDPIDIMVE 416 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999999999999 9999999999999999999988888776 8999999999999999999999999999886
Q ss_pred C
Q 009575 532 V 532 (532)
Q Consensus 532 l 532 (532)
|
T Consensus 417 l 417 (500)
T 3aq1_B 417 L 417 (500)
T ss_dssp H
T ss_pred H
Confidence 4
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.2e-51 Score=381.98 Aligned_cols=193 Identities=48% Similarity=0.801 Sum_probs=189.8
Q ss_pred eeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhh
Q 009575 248 LYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNK 327 (532)
Q Consensus 248 ~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~ 327 (532)
+++++||.|||||+||||+|++++|.++++||+||++|++|+++++++|+||.+.+.|.||+|+++||+++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEeCceEEEEcCCCChhhHHHHH
Q 009575 328 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRV 407 (532)
Q Consensus 328 ~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~i~g~~~~~~i~~r~ 407 (532)
+||.++|||||+|+||+.++..|+|||++|||++++++.|+++++++.++||+|++|++++++|+++.|.++++.|++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEE
Q 009575 408 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVI 440 (532)
Q Consensus 408 ~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI 440 (532)
+||+.++++++++||||+|+||+|+|+|++|+|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999999865
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=1.4e-49 Score=372.99 Aligned_cols=189 Identities=57% Similarity=0.892 Sum_probs=185.9
Q ss_pred EeeeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcc
Q 009575 251 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRG 330 (532)
Q Consensus 251 i~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g 330 (532)
-+||.|||||+||||+|++++|.++++||+||++|++|+++++++|+||.+.+.+.||+|+++||++|||++|+.|++||
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEeCceEEEEcCCCChhhHHHHHHHH
Q 009575 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQI 410 (532)
Q Consensus 331 ~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~i~g~~~~~~i~~r~~~i 410 (532)
.++|||||+|+||+.++..|+|||++|||++++++.|+++++++.++||+|++|++++++|+++.|.++++.|++||+||
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhhhcCCeEE
Q 009575 411 RTLIENAEQDYEREKLNERIAKLSGGVAV 439 (532)
Q Consensus 411 ~~~l~~~~~~~e~~~l~eR~a~lsg~~~t 439 (532)
+.++++++++||||+|+||+|+|+|++|+
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999999999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=4.6e-38 Score=281.83 Aligned_cols=144 Identities=56% Similarity=0.922 Sum_probs=142.1
Q ss_pred eeEEeecccCCccccCcccCeeeccceeEeeecccCCCHHHHHHHHHHHHhcCCCeEEEcccccHHHHHHHHHhhhcccc
Q 009575 253 GMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGAL 332 (532)
Q Consensus 253 G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~~~~el~~~le~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~ 332 (532)
||.|||||+||||+|++++|.++++||+||++|++|+++++++|+||++.+.|.||+|+++||++|||++|+.|++||.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEEEeCceEEEEcC
Q 009575 333 KIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGD 396 (532)
Q Consensus 333 ~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~i~g 396 (532)
+|||||+|+||+.|+..|+|||++|||++++++.|+++++++.++||+|++|++++++|+++.|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999975
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.87 E-value=4.7e-22 Score=187.96 Aligned_cols=146 Identities=17% Similarity=0.291 Sum_probs=120.8
Q ss_pred ccceeeEEeeeEEeecccCCccccCcccCeeeccceeEeeecccCC-------------CHHH-----------HHHHHH
Q 009575 244 AENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT-------------NARD-----------LINVLE 299 (532)
Q Consensus 244 ~~ds~~vi~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~-------------~~~e-----------l~~~le 299 (532)
++|| ++++|++|++++.+| +||+.++||||++++++|+ ++++ +.+.++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHP-------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSST-------TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCC-------CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 4688 899999999998876 4788899999999999753 2222 356788
Q ss_pred HHHhcCCCeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCc
Q 009575 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (532)
Q Consensus 300 ~i~~~g~~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG 379 (532)
++++.|++|||++++|++.|+++|.+++ |+||+ ++++++|++||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~g------I~~vr-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRAN------VTAIR-----RVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----CCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHCC------CEEEe-----cCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 9999999999999999999999999874 46665 67899999999999999999 58999999999
Q ss_pred e-eeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhcCCeEEEEeCCCCHH
Q 009575 380 N-ASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTET 448 (532)
Q Consensus 380 ~-~~~v~---i~~~~~~~i~g~~~~~~i~~r~~~i~~~l~~~~~~~e~~~l~eR~a~lsg~~~tI~v~G~te~ 448 (532)
+ |+.|+ ++++++++|+||+++ ..|||+|||++..
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred CcccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 9 99998 468899999998763 5899999999853
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.78 E-value=1.1e-18 Score=161.94 Aligned_cols=127 Identities=22% Similarity=0.358 Sum_probs=108.9
Q ss_pred EeeeEEeecccCCccccCcccCeeeccceeEeeecccCC-------------CHHH-----------HHHHHHHHHhcCC
Q 009575 251 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT-------------NARD-----------LINVLEDAIRGAY 306 (532)
Q Consensus 251 i~G~~~~~~~~sp~f~~~~~~~~~~~~npkIll~d~~I~-------------~~~e-----------l~~~le~i~~~g~ 306 (532)
++|++|++++.+| +||+.++||||++++++|+ ++++ +.+.++++++.|+
T Consensus 1 i~Gvv~~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHS-------KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCT-------TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCC-------CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 4799999998886 4788899999999999854 3333 3557889999999
Q ss_pred CeEEEcccccHHHHHHHHHhhhcccceEEEeeCCCCCccchhhHHHHHHHhCCeEeecCCCccccCCCCCCCceeeEEE-
Q 009575 307 PILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV- 385 (532)
Q Consensus 307 ~lvIia~~I~~~al~~L~~n~~~g~~~i~aVk~~~~g~~~k~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~- 385 (532)
+|||++++|++.|+++|.+++ |+||+ ++++++|++||++|||++++ ++++++++.||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~g------I~~v~-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCC------CEEEc-----cCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 999999999999999999874 46665 67899999999999999999 58999999999999998
Q ss_pred --EeCceEEEEcCCCCh
Q 009575 386 --LTKDTTTIVGDGSTQ 400 (532)
Q Consensus 386 --i~~~~~~~i~g~~~~ 400 (532)
++++++++|.||++.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 468899999999863
No 32
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=25.14 E-value=1.9e+02 Score=30.40 Aligned_cols=52 Identities=27% Similarity=0.342 Sum_probs=29.1
Q ss_pred HHhhhcC----CeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCchhhhHH
Q 009575 429 RIAKLSG----GVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRL 483 (532)
Q Consensus 429 R~a~lsg----~~~tI~v~G~te~~l~E~k~~i~DAl~a~~~al~~g-vVpGGGa~el~l 483 (532)
.|.+++| ...+|++||. .+++.-.++-.-+..++..=-.. +|.|||..-=.+
T Consensus 48 yi~~f~~~~~~~~iViK~GGs---v~~~~l~~~a~dI~~l~~~G~~~VvVHGgG~~i~~~ 104 (460)
T 3s6g_A 48 YLHRFSGIDQERFAVIKVGGA---VIQDDLPGLASALAFLQTVGLTPVVVHGGGPQLDAA 104 (460)
T ss_dssp HHHHTSSSCGGGSEEEEECHH---HHHHCHHHHHHHHHHHHHHTCCCEEEECCHHHHHHH
T ss_pred HHHHHhCCCCCCEEEEEEChH---HhhhHHHHHHHHHHHHHHCCCcEEEEECCChHHHHH
Confidence 3566776 7899999995 33332233333333332221123 889998755444
Done!