Query 009581
Match_columns 531
No_of_seqs 463 out of 1815
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 08:24:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009581.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009581hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ics_A Coenzyme A-disulfide re 100.0 1.5E-29 5.3E-34 275.1 6.6 243 91-395 311-581 (588)
2 3ntd_A FAD-dependent pyridine 100.0 1.2E-29 4.2E-34 273.3 5.6 250 91-396 296-565 (565)
3 3iwh_A Rhodanese-like domain p 99.9 1E-23 3.6E-28 182.7 9.5 101 270-401 2-102 (103)
4 3foj_A Uncharacterized protein 99.9 3.4E-23 1.2E-27 176.5 9.4 99 270-399 2-100 (100)
5 3eme_A Rhodanese-like domain p 99.9 5.3E-23 1.8E-27 175.9 9.5 101 270-401 2-102 (103)
6 3gk5_A Uncharacterized rhodane 99.9 2.3E-22 7.8E-27 174.3 8.5 103 269-405 3-105 (108)
7 3hix_A ALR3790 protein; rhodan 99.8 8.4E-22 2.9E-26 169.9 7.5 102 276-406 2-104 (106)
8 3d1p_A Putative thiosulfate su 99.8 1.1E-21 3.8E-26 176.1 8.3 115 270-401 23-138 (139)
9 2hhg_A Hypothetical protein RP 99.8 3.2E-21 1.1E-25 172.6 11.2 114 269-404 21-136 (139)
10 1gmx_A GLPE protein; transfera 99.8 1.2E-21 4.2E-26 168.8 8.1 101 270-402 5-105 (108)
11 1qxn_A SUD, sulfide dehydrogen 99.8 2.3E-21 7.8E-26 175.1 9.3 109 269-405 22-133 (137)
12 3ilm_A ALR3790 protein; rhodan 99.8 2.9E-21 9.8E-26 175.6 9.4 105 272-405 2-107 (141)
13 1e0c_A Rhodanese, sulfurtransf 99.8 1.2E-20 4.1E-25 186.3 14.2 115 271-401 148-271 (271)
14 3nhv_A BH2092 protein; alpha-b 99.8 5E-21 1.7E-25 174.4 9.3 108 270-408 16-127 (144)
15 1tq1_A AT5G66040, senescence-a 99.8 5.3E-21 1.8E-25 170.4 9.3 112 269-400 17-128 (129)
16 1e0c_A Rhodanese, sulfurtransf 99.8 3.5E-20 1.2E-24 183.0 12.7 123 269-406 8-134 (271)
17 3flh_A Uncharacterized protein 99.8 1.5E-20 5.2E-25 166.4 8.0 102 270-402 15-120 (124)
18 2wlr_A Putative thiosulfate su 99.8 8.7E-20 3E-24 192.4 15.1 207 161-403 6-252 (423)
19 1urh_A 3-mercaptopyruvate sulf 99.8 1.6E-20 5.4E-25 186.6 7.1 113 272-401 154-278 (280)
20 1wv9_A Rhodanese homolog TT165 99.8 1.2E-20 4E-25 159.0 4.4 93 270-396 2-94 (94)
21 1rhs_A Sulfur-substituted rhod 99.8 4.2E-20 1.4E-24 185.6 8.5 116 271-402 161-289 (296)
22 1urh_A 3-mercaptopyruvate sulf 99.8 7.5E-20 2.6E-24 181.7 9.6 122 270-406 4-139 (280)
23 1uar_A Rhodanese; sulfurtransf 99.8 2.6E-19 9E-24 178.0 13.2 116 272-402 148-283 (285)
24 3olh_A MST, 3-mercaptopyruvate 99.8 2.9E-20 9.9E-25 188.2 6.4 112 272-399 177-299 (302)
25 3i2v_A Adenylyltransferase and 99.8 5.6E-20 1.9E-24 161.0 7.3 115 271-398 2-122 (127)
26 3aay_A Putative thiosulfate su 99.8 2.1E-19 7.3E-24 177.9 11.8 113 272-402 146-276 (277)
27 2fsx_A RV0390, COG0607: rhodan 99.8 3.8E-20 1.3E-24 168.3 5.6 119 268-403 3-141 (148)
28 3hzu_A Thiosulfate sulfurtrans 99.8 2E-19 6.9E-24 183.4 10.9 120 271-405 41-163 (318)
29 2k0z_A Uncharacterized protein 99.8 5.9E-20 2E-24 159.4 5.3 99 271-403 6-104 (110)
30 1vee_A Proline-rich protein fa 99.8 1.4E-19 4.7E-24 162.3 7.4 115 268-404 3-127 (134)
31 1rhs_A Sulfur-substituted rhod 99.8 4E-19 1.4E-23 178.4 11.1 125 268-406 6-147 (296)
32 1t3k_A Arath CDC25, dual-speci 99.8 1.2E-19 4.3E-24 166.6 5.5 108 270-404 28-144 (152)
33 3hzu_A Thiosulfate sulfurtrans 99.8 2.5E-18 8.5E-23 175.4 13.4 112 272-403 181-310 (318)
34 3olh_A MST, 3-mercaptopyruvate 99.8 1.4E-18 4.6E-23 176.0 10.8 124 269-406 21-162 (302)
35 3aay_A Putative thiosulfate su 99.8 8.1E-19 2.8E-23 173.8 8.7 120 271-405 7-129 (277)
36 3g5j_A Putative ATP/GTP bindin 99.8 8.5E-19 2.9E-23 154.3 7.4 108 270-395 5-130 (134)
37 3tp9_A Beta-lactamase and rhod 99.8 1E-18 3.5E-23 186.1 9.5 100 271-401 375-474 (474)
38 2jtq_A Phage shock protein E; 99.7 6.4E-19 2.2E-23 145.5 5.6 84 286-401 1-84 (85)
39 1uar_A Rhodanese; sulfurtransf 99.7 7.3E-19 2.5E-23 174.8 6.8 120 271-405 9-131 (285)
40 2vsw_A Dual specificity protei 99.7 5.8E-18 2E-22 153.9 6.8 125 270-406 4-138 (153)
41 2ouc_A Dual specificity protei 99.7 1.5E-17 5.1E-22 147.5 8.3 120 271-402 2-139 (142)
42 1c25_A CDC25A; hydrolase, cell 99.7 1.3E-17 4.4E-22 153.1 7.8 108 270-402 23-148 (161)
43 1okg_A Possible 3-mercaptopyru 99.7 6.8E-18 2.3E-22 176.3 6.2 117 270-404 14-146 (373)
44 1yt8_A Thiosulfate sulfurtrans 99.7 3E-17 1E-21 178.3 10.9 109 270-406 7-115 (539)
45 1yt8_A Thiosulfate sulfurtrans 99.7 2.2E-17 7.4E-22 179.5 9.7 197 160-405 266-481 (539)
46 2j6p_A SB(V)-AS(V) reductase; 99.7 5.9E-17 2E-21 148.4 8.8 107 270-401 5-122 (152)
47 2a2k_A M-phase inducer phospha 99.7 4.5E-17 1.5E-21 151.6 7.9 109 270-402 24-150 (175)
48 2wlr_A Putative thiosulfate su 99.7 4.3E-17 1.5E-21 171.9 8.5 121 272-408 274-413 (423)
49 1qb0_A Protein (M-phase induce 99.7 7.3E-17 2.5E-21 155.6 8.6 106 270-402 44-170 (211)
50 2eg4_A Probable thiosulfate su 99.7 1.6E-16 5.4E-21 153.8 9.8 90 286-401 131-230 (230)
51 4f67_A UPF0176 protein LPG2838 99.7 2.1E-16 7.2E-21 158.5 10.4 102 270-396 122-223 (265)
52 3utn_X Thiosulfate sulfurtrans 99.6 7.2E-16 2.4E-20 158.9 12.6 160 228-397 101-318 (327)
53 3f4a_A Uncharacterized protein 99.6 3E-16 1E-20 146.9 8.5 116 270-402 31-159 (169)
54 1hzm_A Dual specificity protei 99.6 1.5E-16 5.1E-21 144.3 4.2 108 270-395 16-142 (154)
55 3op3_A M-phase inducer phospha 99.6 3.9E-16 1.3E-20 152.2 7.2 107 270-401 57-182 (216)
56 1okg_A Possible 3-mercaptopyru 99.6 1.6E-16 5.5E-21 165.9 4.3 104 285-402 173-295 (373)
57 3tg1_B Dual specificity protei 99.6 2.6E-15 8.7E-20 138.0 8.4 107 270-395 11-142 (158)
58 2eg4_A Probable thiosulfate su 99.6 2.3E-15 7.8E-20 145.7 5.8 101 283-405 3-107 (230)
59 3utn_X Thiosulfate sulfurtrans 99.5 7.6E-15 2.6E-19 151.2 9.2 120 270-404 28-163 (327)
60 1whb_A KIAA0055; deubiqutinati 99.5 2.3E-14 8E-19 131.6 9.9 117 269-404 14-149 (157)
61 2gwf_A Ubiquitin carboxyl-term 99.5 3.1E-14 1.1E-18 131.3 8.5 115 269-402 19-152 (157)
62 3r2u_A Metallo-beta-lactamase 99.5 2.6E-15 8.9E-20 160.4 1.0 123 237-394 333-465 (466)
63 3tp9_A Beta-lactamase and rhod 99.4 1.2E-13 4.1E-18 147.0 7.8 122 269-431 272-394 (474)
64 3r2u_A Metallo-beta-lactamase 98.9 8.9E-10 3E-14 117.7 6.4 79 285-393 295-375 (466)
65 3iwa_A FAD-dependent pyridine 98.7 2.8E-09 9.7E-14 112.6 0.1 106 91-215 287-401 (472)
66 4eqs_A Coenzyme A disulfide re 98.6 4.1E-09 1.4E-13 111.1 -1.5 110 91-225 269-387 (437)
67 3kd9_A Coenzyme A disulfide re 98.5 1.2E-08 4.1E-13 107.1 -1.1 111 91-225 273-392 (449)
68 3oc4_A Oxidoreductase, pyridin 98.0 3.4E-07 1.2E-11 96.2 -2.0 104 91-215 272-384 (452)
69 3cgb_A Pyridine nucleotide-dis 97.9 1.3E-06 4.5E-11 92.7 -1.0 106 91-215 311-425 (480)
70 3urh_A Dihydrolipoyl dehydroge 97.8 2.4E-06 8.3E-11 90.7 -0.6 106 91-225 331-440 (491)
71 3l8k_A Dihydrolipoyl dehydroge 97.8 2.8E-06 9.5E-11 89.8 -0.9 108 91-225 301-413 (466)
72 3lad_A Dihydrolipoamide dehydr 97.8 2.5E-06 8.5E-11 90.0 -1.4 106 91-225 311-420 (476)
73 2cdu_A NADPH oxidase; flavoenz 97.7 2.2E-06 7.5E-11 89.9 -2.0 106 91-215 275-389 (452)
74 1nhp_A NADH peroxidase; oxidor 97.7 2.8E-06 9.5E-11 89.0 -1.8 111 91-225 274-393 (447)
75 4dna_A Probable glutathione re 97.7 6.6E-06 2.3E-10 86.7 0.0 109 91-225 299-409 (463)
76 2bc0_A NADH oxidase; flavoprot 97.6 5.6E-06 1.9E-10 88.1 -1.1 106 91-215 319-434 (490)
77 1mo9_A ORF3; nucleotide bindin 97.5 1.1E-05 3.7E-10 86.8 -0.7 117 91-225 346-471 (523)
78 3o0h_A Glutathione reductase; 97.5 1.2E-05 4.1E-10 85.3 -0.9 109 91-225 319-429 (484)
79 1ojt_A Surface protein; redox- 97.4 1.5E-05 5.3E-10 84.4 -0.9 106 91-225 317-426 (482)
80 3dk9_A Grase, GR, glutathione 97.4 2.1E-05 7.2E-10 83.0 -0.9 110 91-225 324-437 (478)
81 3qfa_A Thioredoxin reductase 1 97.3 2.9E-05 1E-09 83.4 -1.0 110 91-225 347-462 (519)
82 3ic9_A Dihydrolipoamide dehydr 97.2 3.2E-05 1.1E-09 82.4 -1.3 109 91-225 306-422 (492)
83 1onf_A GR, grase, glutathione 97.0 8.3E-05 2.8E-09 79.3 -0.7 94 111-225 354-455 (500)
84 2qae_A Lipoamide, dihydrolipoy 96.9 0.0001 3.6E-09 77.5 -0.8 109 91-225 307-417 (468)
85 1ebd_A E3BD, dihydrolipoamide 96.9 0.00012 4E-09 76.9 -0.7 108 91-225 301-410 (455)
86 2eq6_A Pyruvate dehydrogenase 96.9 0.00012 4.1E-09 77.2 -0.9 108 91-225 302-410 (464)
87 1dxl_A Dihydrolipoamide dehydr 96.9 0.00011 3.8E-09 77.1 -1.4 108 91-225 310-419 (470)
88 2a8x_A Dihydrolipoyl dehydroge 96.8 0.00013 4.4E-09 76.7 -1.3 107 91-225 302-413 (464)
89 1xdi_A RV3303C-LPDA; reductase 96.8 0.00017 5.7E-09 76.8 -0.7 102 91-215 310-415 (499)
90 3dgh_A TRXR-1, thioredoxin red 96.8 0.00021 7.3E-09 75.6 0.0 64 91-159 319-385 (483)
91 1zmd_A Dihydrolipoyl dehydroge 96.7 0.00017 5.8E-09 76.0 -1.2 108 91-225 313-422 (474)
92 3dgz_A Thioredoxin reductase 2 96.7 0.00018 6.3E-09 76.2 -1.0 102 91-225 319-434 (488)
93 1zk7_A HGII, reductase, mercur 96.7 0.00016 5.5E-09 76.1 -1.6 107 91-225 302-411 (467)
94 4b1b_A TRXR, thioredoxin reduc 96.6 0.00023 8E-09 77.6 -0.8 68 91-163 351-421 (542)
95 2wpf_A Trypanothione reductase 96.6 0.00027 9.2E-09 75.5 -1.0 108 91-225 323-434 (495)
96 2hqm_A GR, grase, glutathione 96.5 0.00048 1.6E-08 73.0 0.8 108 91-225 315-430 (479)
97 2f46_A Hypothetical protein; s 96.5 0.0032 1.1E-07 57.1 6.1 104 271-401 29-146 (156)
98 1v59_A Dihydrolipoamide dehydr 96.4 0.00037 1.3E-08 73.4 -1.1 101 91-215 318-422 (478)
99 1ges_A Glutathione reductase; 96.3 0.00054 1.9E-08 72.0 -0.7 109 91-225 296-409 (450)
100 1fec_A Trypanothione reductase 96.3 0.0005 1.7E-08 73.2 -0.9 67 91-163 319-388 (490)
101 1lvl_A Dihydrolipoamide dehydr 96.3 0.0013 4.5E-08 69.2 2.1 103 91-215 298-402 (458)
102 2r9z_A Glutathione amide reduc 96.0 0.0011 3.6E-08 70.1 -0.2 108 91-225 295-407 (463)
103 2yqu_A 2-oxoglutarate dehydrog 95.6 0.0029 9.8E-08 66.2 1.3 103 91-215 295-399 (455)
104 2x8g_A Thioredoxin glutathione 94.3 0.0095 3.2E-07 64.7 0.7 64 91-159 426-492 (598)
105 3klj_A NAD(FAD)-dependent dehy 93.8 0.025 8.5E-07 58.4 2.6 62 91-154 258-322 (385)
106 1xhc_A NADH oxidase /nitrite r 93.0 0.034 1.2E-06 56.8 2.1 62 91-154 261-325 (367)
107 2gqw_A Ferredoxin reductase; f 86.1 0.27 9.3E-06 50.6 2.1 58 91-151 266-333 (408)
108 1q1r_A Putidaredoxin reductase 84.8 0.33 1.1E-05 50.5 2.0 60 91-153 277-345 (431)
109 2r0b_A Serine/threonine/tyrosi 77.9 7.5 0.00026 34.0 8.1 28 353-380 89-119 (154)
110 2nt2_A Protein phosphatase sli 76.3 5.6 0.00019 34.6 6.7 27 353-379 80-109 (145)
111 3rgo_A Protein-tyrosine phosph 76.1 3.1 0.00011 36.3 5.0 28 353-380 88-118 (157)
112 3lxd_A FAD-dependent pyridine 75.9 1.2 4.1E-05 45.6 2.6 43 91-135 278-327 (415)
113 2e0t_A Dual specificity phosph 74.9 4.3 0.00015 35.5 5.6 28 353-380 84-114 (151)
114 2v3a_A Rubredoxin reductase; a 74.6 1.3 4.3E-05 44.9 2.3 42 91-134 270-311 (384)
115 4erc_A Dual specificity protei 72.6 9.8 0.00033 32.8 7.3 27 353-379 87-116 (150)
116 1m6i_A Programmed cell death p 72.3 1.3 4.5E-05 46.8 1.9 43 90-134 310-357 (493)
117 3ef6_A Toluene 1,2-dioxygenase 72.2 1.6 5.3E-05 44.9 2.3 42 91-135 268-315 (410)
118 3fg2_P Putative rubredoxin red 71.9 1.5 5E-05 44.8 2.0 43 91-135 268-316 (404)
119 1xri_A AT1G05000; structural g 68.9 3.2 0.00011 36.3 3.3 28 353-380 91-120 (151)
120 2hcm_A Dual specificity protei 68.9 15 0.00052 32.5 7.9 27 353-379 88-117 (164)
121 1v8c_A MOAD related protein; r 67.6 0.85 2.9E-05 42.4 -0.8 27 287-325 122-148 (168)
122 1ywf_A Phosphotyrosine protein 61.5 29 0.00099 34.5 9.1 27 354-380 173-201 (296)
123 3s4e_A Dual specificity protei 61.0 28 0.00094 30.1 7.9 28 353-380 80-110 (144)
124 4gcm_A TRXR, thioredoxin reduc 59.8 3.3 0.00011 40.0 1.8 38 86-127 263-303 (312)
125 2j16_A SDP-1, tyrosine-protein 59.0 16 0.00056 33.8 6.3 27 353-379 116-145 (182)
126 1wrm_A Dual specificity phosph 58.1 15 0.00053 32.6 5.8 27 353-379 82-111 (165)
127 1yz4_A DUSP15, dual specificit 57.5 18 0.00063 31.8 6.2 28 353-380 83-113 (160)
128 2g6z_A Dual specificity protei 57.4 29 0.00098 32.9 7.9 27 353-379 82-111 (211)
129 2ywl_A Thioredoxin reductase r 57.3 4.3 0.00015 36.0 1.9 33 91-127 136-168 (180)
130 3f81_A Dual specificity protei 56.0 24 0.00081 31.7 6.7 27 354-380 115-144 (183)
131 3vrd_B FCCB subunit, flavocyto 55.9 4.5 0.00015 40.8 2.0 34 92-127 288-321 (401)
132 3ezz_A Dual specificity protei 54.9 23 0.00079 30.4 6.3 28 353-380 80-110 (144)
133 2img_A Dual specificity protei 53.9 28 0.00095 29.7 6.6 18 353-370 88-106 (151)
134 3hyw_A Sulfide-quinone reducta 52.5 4.6 0.00016 41.6 1.5 35 92-127 288-330 (430)
135 3emu_A Leucine rich repeat and 50.8 38 0.0013 30.1 7.2 28 353-380 86-116 (161)
136 2o8n_A APOA-I binding protein; 45.8 33 0.0011 33.9 6.4 45 355-400 80-137 (265)
137 3rz2_A Protein tyrosine phosph 45.4 49 0.0017 30.0 7.2 28 352-379 115-144 (189)
138 2y96_A Dual specificity phosph 44.2 25 0.00086 33.2 5.1 27 353-379 138-167 (219)
139 2wgp_A Dual specificity protei 44.0 39 0.0013 30.9 6.3 28 353-380 102-132 (190)
140 1fpz_A Cyclin-dependent kinase 43.5 43 0.0015 30.9 6.5 24 353-376 132-157 (212)
141 3fbs_A Oxidoreductase; structu 43.4 9.7 0.00033 35.8 2.1 31 91-126 258-288 (297)
142 1jzt_A Hypothetical 27.5 kDa p 42.9 41 0.0014 32.7 6.5 45 355-400 59-117 (246)
143 2jgn_A DBX, DDX3, ATP-dependen 41.6 22 0.00075 32.3 4.1 37 353-390 45-81 (185)
144 3lzw_A Ferredoxin--NADP reduct 40.7 10 0.00035 36.3 1.8 35 91-127 278-312 (332)
145 1y56_A Hypothetical protein PH 40.1 9.8 0.00033 40.1 1.6 31 91-127 344-374 (493)
146 4a5l_A Thioredoxin reductase; 40.0 8.9 0.0003 36.7 1.2 32 92-127 278-309 (314)
147 3d3k_A Enhancer of mRNA-decapp 39.5 29 0.001 34.0 4.9 45 355-400 86-144 (259)
148 3s4o_A Protein tyrosine phosph 38.6 93 0.0032 26.7 7.6 27 353-379 108-137 (167)
149 2cul_A Glucose-inhibited divis 38.2 13 0.00045 34.7 2.0 33 89-127 197-229 (232)
150 3d3j_A Enhancer of mRNA-decapp 37.2 32 0.0011 34.6 4.9 45 355-400 133-191 (306)
151 3f8d_A Thioredoxin reductase ( 37.0 13 0.00046 35.2 1.9 35 91-127 280-314 (323)
152 2q0l_A TRXR, thioredoxin reduc 36.7 13 0.00044 35.6 1.7 33 91-127 274-306 (311)
153 3rss_A Putative uncharacterize 36.6 37 0.0013 36.5 5.5 47 353-400 51-110 (502)
154 3d1c_A Flavin-containing putat 36.6 12 0.00042 36.6 1.6 36 91-127 301-336 (369)
155 3r9u_A Thioredoxin reductase; 35.9 15 0.00051 34.8 2.1 32 91-126 277-308 (315)
156 2q7v_A Thioredoxin reductase; 35.8 13 0.00046 35.8 1.7 33 91-127 277-309 (325)
157 3sx6_A Sulfide-quinone reducta 35.3 13 0.00046 38.1 1.7 36 91-127 298-341 (437)
158 2hjv_A ATP-dependent RNA helic 34.1 31 0.001 30.3 3.7 37 353-390 34-70 (163)
159 1zzw_A Dual specificity protei 33.6 38 0.0013 29.2 4.2 27 353-379 82-111 (149)
160 4g6h_A Rotenone-insensitive NA 33.1 15 0.00051 39.1 1.7 33 92-127 366-398 (502)
161 1vdc_A NTR, NADPH dependent th 33.0 17 0.00059 35.0 2.0 33 91-127 288-320 (333)
162 2rb4_A ATP-dependent RNA helic 32.5 32 0.0011 30.5 3.6 36 353-389 33-68 (175)
163 4fk1_A Putative thioredoxin re 32.2 18 0.00061 34.8 2.0 31 92-126 266-296 (304)
164 3itj_A Thioredoxin reductase 1 32.0 19 0.00063 34.5 2.0 33 91-127 300-332 (338)
165 2q05_A Late protein H1, dual s 31.8 88 0.003 28.6 6.6 19 353-371 124-143 (195)
166 1t5i_A C_terminal domain of A 31.2 36 0.0012 30.3 3.7 37 353-390 30-66 (172)
167 3h28_A Sulfide-quinone reducta 30.9 16 0.00056 37.3 1.5 36 91-127 287-330 (430)
168 4fak_A Ribosomal RNA large sub 30.4 66 0.0023 29.6 5.4 47 344-390 64-115 (163)
169 3cm3_A Late protein H1, dual s 29.8 65 0.0022 28.7 5.2 28 353-380 107-137 (176)
170 1fuk_A Eukaryotic initiation f 29.8 43 0.0015 29.3 3.9 37 353-390 29-65 (165)
171 3cty_A Thioredoxin reductase; 29.1 21 0.00071 34.3 1.8 33 91-127 281-313 (319)
172 1trb_A Thioredoxin reductase; 28.7 23 0.00078 33.8 2.0 33 91-127 279-311 (320)
173 1fl2_A Alkyl hydroperoxide red 28.6 20 0.00068 34.2 1.6 33 91-127 270-302 (310)
174 3nme_A Ptpkis1 protein, SEX4 g 28.4 96 0.0033 30.6 6.6 27 354-380 106-135 (294)
175 3to5_A CHEY homolog; alpha(5)b 28.4 74 0.0025 27.6 5.2 42 353-394 11-52 (134)
176 1tvm_A PTS system, galactitol- 28.0 44 0.0015 28.4 3.5 27 354-380 21-52 (113)
177 2hxp_A Dual specificity protei 27.8 50 0.0017 28.9 4.0 27 353-379 84-113 (155)
178 2esb_A Dual specificity protei 27.5 46 0.0016 30.3 3.8 28 353-380 96-126 (188)
179 4h3k_B RNA polymerase II subun 27.5 59 0.002 31.3 4.6 32 355-387 26-58 (214)
180 2a87_A TRXR, TR, thioredoxin r 26.5 25 0.00087 34.1 1.9 33 91-127 281-313 (335)
181 3kht_A Response regulator; PSI 25.8 2.7E+02 0.0091 22.6 9.8 41 354-394 5-46 (144)
182 1ohe_A CDC14B, CDC14B2 phospha 25.4 1.7E+02 0.0059 29.6 8.0 27 353-379 268-297 (348)
183 2zbw_A Thioredoxin reductase; 25.0 25 0.00086 33.8 1.6 35 91-127 280-314 (335)
184 3eaq_A Heat resistant RNA depe 24.4 99 0.0034 28.4 5.5 37 353-390 30-66 (212)
185 3h8l_A NADH oxidase; membrane 24.3 30 0.001 34.9 2.0 34 91-127 300-333 (409)
186 3ab1_A Ferredoxin--NADP reduct 23.9 27 0.00092 34.2 1.6 35 91-127 291-325 (360)
187 4f0j_A Probable hydrolytic enz 22.5 2.6E+02 0.0089 25.1 8.0 81 353-439 44-130 (315)
188 3k30_A Histamine dehydrogenase 22.5 31 0.0011 38.0 1.8 31 91-127 642-672 (690)
189 2cwd_A Low molecular weight ph 22.2 54 0.0018 29.5 3.1 41 353-393 3-49 (161)
190 3rof_A Low molecular weight pr 22.1 49 0.0017 30.0 2.8 38 355-392 7-49 (158)
191 2oud_A Dual specificity protei 22.0 65 0.0022 28.9 3.6 27 353-379 86-115 (177)
192 2i4i_A ATP-dependent RNA helic 22.0 73 0.0025 31.5 4.3 38 352-390 274-311 (417)
193 2vdc_G Glutamate synthase [NAD 22.0 35 0.0012 35.7 2.1 32 91-127 410-441 (456)
194 3p9y_A CG14216, LD40846P; phos 20.9 96 0.0033 29.6 4.6 31 355-386 10-41 (198)
195 4a9w_A Monooxygenase; baeyer-v 20.2 47 0.0016 31.8 2.4 33 91-127 315-349 (357)
No 1
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.95 E-value=1.5e-29 Score=275.12 Aligned_cols=243 Identities=19% Similarity=0.212 Sum_probs=184.8
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhcccc
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVA 161 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~~ 161 (531)
..|||+|||... .+.++|. +..|.+|||.+|++++|.....+++...+.+.+ ...+++||+|+.+++.|+
T Consensus 311 ~~IyA~GD~~~~-~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~g~ 389 (588)
T 3ics_A 311 PHIYAIGDAIEV-KDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNI 389 (588)
T ss_dssp TTEEECGGGBCE-EBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC
T ss_pred CCEEEeeeeeec-ccccCCcccccccHHHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeEEEEecCCHHHHHHcCC
Confidence 359999999988 7877774 678999999999999942667788888888766 668999999999999999
Q ss_pred eehhhhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeec--ccc--hHHHHHHHHHHHhHhc--
Q 009581 162 AVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRP--VGS--ALQQVSVAIEGLERSL-- 235 (531)
Q Consensus 162 ~~d~l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~--~G~--~aq~v~~~~egv~k~l-- 235 (531)
+| +.......++..|++|.....+ |+ +++.++|+|||- +|. +.+.+..+--.+...+
T Consensus 390 ~~----------~~~~~~~~~~~~~~~~~~~~~~-----k~--i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~ 452 (588)
T 3ics_A 390 PY----------EVVHVQANSHAGYYPNATPVLI-----KL--IFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTV 452 (588)
T ss_dssp CC----------EEEEEEEESSCTTSTTCCEEEE-----EE--EECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBT
T ss_pred Ce----------EEEEEecCCccccCCCCceEEE-----EE--EEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCH
Confidence 98 5554445566678889888888 88 888889999982 331 2222211111111111
Q ss_pred -Cc------------CCCCCeeehhhhHhHHHHHHHHHHHHHhCCCCCccCHHHHHHHHhCCCCcEEEEeCChhhhhhcC
Q 009581 236 -GF------------DPNDPIVPFVVFLGTSATLWIFYWWWTYGGYSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDG 302 (531)
Q Consensus 236 -gv------------~~~dpVv~~~~~~G~~~~l~~~~~~~~~~g~~~~ISp~El~elL~~~~~avLIDVRs~eEf~~GH 302 (531)
++ ...+++++ ++ ....+...+....|+++++.+++. ++.+|||||++.||+.||
T Consensus 453 ~~l~~~~~~~~P~~~~~~d~i~~----aa-------~~a~n~~~~~~~~i~~~~~~~~~~--~~~~~iDvR~~~e~~~gh 519 (588)
T 3ics_A 453 LDLPDLELSYAPPYSSAKDPVNM----VG-------YAASNIVDGFVDTVQWHEIDRIVE--NGGYLIDVREPNELKQGM 519 (588)
T ss_dssp TTGGGCCCCCSTTTCCSSCHHHH----HH-------HHHHHHHTTSCCEECTTTHHHHHH--TTCEEEECSCGGGGGGCB
T ss_pred HHhhhhhhccCCCcccccchhhh----cc-------cccccccccccceecHHHHHHHhc--CCCEEEEcCCHHHHhcCC
Confidence 11 01222221 11 224456677778899999999985 568999999999999999
Q ss_pred CccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCce
Q 009581 303 IPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRA 382 (531)
Q Consensus 303 IPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV 382 (531)
||||+ |||+.++...+.. ++++++||+||++|.||..+++.|+.+||+ |
T Consensus 520 i~ga~--------~ip~~~l~~~~~~----------------------l~~~~~iv~~C~~g~rs~~a~~~l~~~G~~-v 568 (588)
T 3ics_A 520 IKGSI--------NIPLDELRDRLEE----------------------VPVDKDIYITCQLGMRGYVAARMLMEKGYK-V 568 (588)
T ss_dssp CTTEE--------ECCHHHHTTCGGG----------------------SCSSSCEEEECSSSHHHHHHHHHHHHTTCC-E
T ss_pred CCCCE--------ECCHHHHHHHHhh----------------------CCCCCeEEEECCCCcHHHHHHHHHHHcCCc-E
Confidence 99999 9998877655443 357899999999999999999999999998 9
Q ss_pred EEecchHHHHHHc
Q 009581 383 FLVQGGFQSWVKE 395 (531)
Q Consensus 383 ~~L~GG~~aW~~a 395 (531)
++|+|||.+|+++
T Consensus 569 ~~l~GG~~~w~~~ 581 (588)
T 3ics_A 569 KNVDGGFKLYGTV 581 (588)
T ss_dssp EEETTHHHHHHHH
T ss_pred EEEcchHHHHHhh
Confidence 9999999999875
No 2
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.95 E-value=1.2e-29 Score=273.32 Aligned_cols=250 Identities=20% Similarity=0.230 Sum_probs=181.9
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhcccc
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVA 161 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~~ 161 (531)
..|||+|||.+. .+.++|. +..|.+|||.+|++++| ....+++...+...+ ...+++||+|+.+++.|+
T Consensus 296 ~~IyA~GD~~~~-~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~ 373 (565)
T 3ntd_A 296 PAIYAVGDAVEE-QDFVTGQACLVPLAGPANRQGRMAADNMFG-REERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGI 373 (565)
T ss_dssp TTEEECGGGBCE-EBTTTCCEECCCCHHHHHHHHHHHHHHHTT-CCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC
T ss_pred CCEEEeeeeEee-ccccCCceeecccHHHHHHHHHHHHHHhcC-CCccCCCcccceEEEEcCcEEEEecCCHHHHHHcCC
Confidence 359999999988 7777775 66799999999999994 667788877766544 668999999999999999
Q ss_pred eehhhhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeec--ccch-----HHHHHHHHHH---H
Q 009581 162 AVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRP--VGSA-----LQQVSVAIEG---L 231 (531)
Q Consensus 162 ~~d~l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~--~G~~-----aq~v~~~~eg---v 231 (531)
+| +.......++..||||..+..+ |+ +++.++|+|||- +|.- .+.+..++.. +
T Consensus 374 ~~----------~~~~~~~~~~~~~~~~~~~~~~-----k~--v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~~~ 436 (565)
T 3ntd_A 374 AF----------EKVYVHTASHASYYPGAEVVSF-----KL--LFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTV 436 (565)
T ss_dssp CC----------EEEEEEEESSCTTSTTCCEEEE-----EE--EECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBH
T ss_pred Ce----------EEEEEecCcccCcCCCCceEEE-----EE--EEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCH
Confidence 88 5555556677788889888888 88 888889999992 2322 2222211111 0
Q ss_pred hHhcCcC-CCCCeeehhhhHhHHHHHHHHHHHHHhCCCCCccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccc
Q 009581 232 ERSLGFD-PNDPIVPFVVFLGTSATLWIFYWWWTYGGYSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGA 310 (531)
Q Consensus 232 ~k~lgv~-~~dpVv~~~~~~G~~~~l~~~~~~~~~~g~~~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~ 310 (531)
+...... .-.|-.. -..... ......+.+...+....|+++++.++ .++.+|||||++.||+.+|||||+
T Consensus 437 ~~l~~~~~~~~P~~~--~~~~~i-~~aa~~~~~~~~~~~~~i~~~~~~~~---~~~~~~iDvR~~~e~~~~~i~ga~--- 507 (565)
T 3ntd_A 437 EQLQHLELSYAPPYG--SAKDVI-NQAAFVASNIIKGDATPIHFDQIDNL---SEDQLLLDVRNPGELQNGGLEGAV--- 507 (565)
T ss_dssp HHHTTCCCCCCTTTC--CSSCHH-HHHHHHHHHHHHTSCCEECTTTTTSC---CTTEEEEECSCGGGGGGCCCTTCE---
T ss_pred HHHhhhhhccCcccC--chhhhh-hhhhhhhhhccccccceeeHHHHHhC---CCCcEEEEeCCHHHHhcCCCCCcE---
Confidence 0111110 1112110 000000 00011134455566678999998765 468899999999999999999999
Q ss_pred cccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHH
Q 009581 311 RFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (531)
Q Consensus 311 ~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~ 390 (531)
|+|+.++..++.. ++++++||+||++|.||..+++.|+.+|| +|++|+|||.
T Consensus 508 -----~ip~~~l~~~~~~----------------------~~~~~~iv~~c~~g~rs~~a~~~l~~~G~-~v~~l~gG~~ 559 (565)
T 3ntd_A 508 -----NIPVDELRDRMHE----------------------LPKDKEIIIFSQVGLRGNVAYRQLVNNGY-RARNLIGGYR 559 (565)
T ss_dssp -----ECCGGGTTTSGGG----------------------SCTTSEEEEECSSSHHHHHHHHHHHHTTC-CEEEETTHHH
T ss_pred -----ECCHHHHHHHHhh----------------------cCCcCeEEEEeCCchHHHHHHHHHHHcCC-CEEEEcChHH
Confidence 9999887665443 35789999999999999999999999999 9999999999
Q ss_pred HHHHcC
Q 009581 391 SWVKEG 396 (531)
Q Consensus 391 aW~~aG 396 (531)
+|+++|
T Consensus 560 ~w~~~g 565 (565)
T 3ntd_A 560 TYKFAS 565 (565)
T ss_dssp HHHHTC
T ss_pred HHHhCc
Confidence 999876
No 3
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.89 E-value=1e-23 Score=182.67 Aligned_cols=101 Identities=22% Similarity=0.377 Sum_probs=90.6
Q ss_pred CccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 009581 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (531)
Q Consensus 270 ~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk 349 (531)
+.||++|+.+++.++++++|||||++.||+.||||||+ |||+.+|..++.+
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAK--------LIPMDTIPDNLNS--------------------- 52 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcc--------cCcccchhhhhhh---------------------
Confidence 46999999998877778999999999999999999999 9999887665543
Q ss_pred ccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceec
Q 009581 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (531)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~ 401 (531)
++++++||+||++|.||..+++.|+.+||+ +++|.|||.+|+++|+|+++
T Consensus 53 -l~~~~~ivv~C~~G~rS~~aa~~L~~~G~~-~~~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 53 -FNKNEIYYIVCAGGVRSAKVVEYLEANGID-AVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp -CCTTSEEEEECSSSSHHHHHHHHHHTTTCE-EEEETTHHHHHCSSSCBCCC
T ss_pred -hcCCCeEEEECCCCHHHHHHHHHHHHcCCC-EEEecChHHHHHHCCCccee
Confidence 358999999999999999999999999996 56799999999999999975
No 4
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.88 E-value=3.4e-23 Score=176.50 Aligned_cols=99 Identities=20% Similarity=0.324 Sum_probs=89.3
Q ss_pred CccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 009581 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (531)
Q Consensus 270 ~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk 349 (531)
..|+++++.+++.++++.+|||||++.||..||||||+ |+|+.++...+..
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAE--------TIPMNSIPDNLNY--------------------- 52 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHHh---------------------
Confidence 46899999998866678999999999999999999999 9999877654433
Q ss_pred ccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCce
Q 009581 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRI 399 (531)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV 399 (531)
++++++||+||++|.||..+++.|+.+|| +|++|+|||.+|.++|+||
T Consensus 53 -l~~~~~ivvyC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 53 -FNDNETYYIICKAGGRSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp -SCTTSEEEEECSSSHHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred -CCCCCcEEEEcCCCchHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 35789999999999999999999999999 9999999999999999986
No 5
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.88 E-value=5.3e-23 Score=175.92 Aligned_cols=101 Identities=22% Similarity=0.386 Sum_probs=90.9
Q ss_pred CccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 009581 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (531)
Q Consensus 270 ~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk 349 (531)
..|+++++.+++.++++.+|||||++.||..||||||+ |+|+.++...+..
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAK--------LIPMDTIPDNLNS--------------------- 52 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHHh---------------------
Confidence 46899999998866678999999999999999999999 9999887655443
Q ss_pred ccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceec
Q 009581 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (531)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~ 401 (531)
++++++||+||++|.||..+++.|+.+|| +|++|+|||.+|+++|+|+++
T Consensus 53 -l~~~~~iv~yC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 53 -FNKNEIYYIVCAGGVRSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp -CCTTSEEEEECSSSSHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred -CCCCCeEEEECCCChHHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 25789999999999999999999999999 999999999999999999875
No 6
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.86 E-value=2.3e-22 Score=174.27 Aligned_cols=103 Identities=23% Similarity=0.318 Sum_probs=89.4
Q ss_pred CCccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhh
Q 009581 269 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (531)
Q Consensus 269 ~~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~L 348 (531)
...|+++++.+++. . .+|||||++.||..||||||+ |+|+.++...+..
T Consensus 3 ~~~is~~el~~~l~--~-~~iiDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~-------------------- 51 (108)
T 3gk5_A 3 YRSINAADLYENIK--A-YTVLDVREPFELIFGSIANSI--------NIPISELREKWKI-------------------- 51 (108)
T ss_dssp CCEECHHHHHHTTT--T-CEEEECSCHHHHTTCBCTTCE--------ECCHHHHHHHGGG--------------------
T ss_pred ccEeCHHHHHHHHc--C-CEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHHh--------------------
Confidence 46799999999874 2 899999999999999999999 9998776554332
Q ss_pred cccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccc
Q 009581 349 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSE 405 (531)
Q Consensus 349 k~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~ 405 (531)
++++++||+||++|.||..+++.|+.+|| +|++|+|||.+|+++|+|+.+..+.
T Consensus 52 --l~~~~~ivvyC~~G~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~~ 105 (108)
T 3gk5_A 52 --LERDKKYAVICAHGNRSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHHH 105 (108)
T ss_dssp --SCTTSCEEEECSSSHHHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC---
T ss_pred --CCCCCeEEEEcCCCcHHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCCC
Confidence 35789999999999999999999999999 9999999999999999999886544
No 7
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.85 E-value=8.4e-22 Score=169.95 Aligned_cols=102 Identities=14% Similarity=0.176 Sum_probs=80.7
Q ss_pred HHHHHHhC-CCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCC
Q 009581 276 STLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDR 354 (531)
Q Consensus 276 El~elL~~-~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~l~kd 354 (531)
|+.+++.. +++.+|||||++.||..||||||+ |||+.++..+... .++++
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~---------------------~l~~~ 52 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--------AMPIEDLVDRASS---------------------SLEKS 52 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCE--------ECCGGGHHHHHHH---------------------HSCTT
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCE--------eCCHHHHHHHHHh---------------------cCCCC
Confidence 45566643 346899999999999999999999 9998776543321 13578
Q ss_pred cEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccch
Q 009581 355 SKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSET 406 (531)
Q Consensus 355 ~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~~ 406 (531)
++||+||++|.||..+++.|+.+||++|++|+|||.+|+++|+|+.+..+.+
T Consensus 53 ~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~~~ 104 (106)
T 3hix_A 53 RDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHHHH 104 (106)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCEEE
T ss_pred CeEEEEECCCChHHHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999865443
No 8
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.1e-21 Score=176.05 Aligned_cols=115 Identities=18% Similarity=0.206 Sum_probs=95.2
Q ss_pred CccCHHHHHHHHhC-CCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhh
Q 009581 270 GDLSPKSTLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (531)
Q Consensus 270 ~~ISp~El~elL~~-~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~L 348 (531)
..|+++++.+++.+ +++.+|||||++.||..||||||+ |+|+.++... +..++.++.+.+...
T Consensus 23 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------nip~~~l~~~---~~~~~~~~~~~~~~~----- 86 (139)
T 3d1p_A 23 QSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASI--------NVPYRSHPDA---FALDPLEFEKQIGIP----- 86 (139)
T ss_dssp EECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCE--------ECCTTTCTTG---GGSCHHHHHHHHSSC-----
T ss_pred ceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcE--------EcCHHHhhhh---ccCCHHHHHHHHhcc-----
Confidence 47999999999854 357899999999999999999999 9998877542 233444444433211
Q ss_pred cccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceec
Q 009581 349 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (531)
Q Consensus 349 k~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~ 401 (531)
.++++++||+||++|.||..+++.|+.+||++|++|+|||.+|.++|+|+..
T Consensus 87 -~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 87 -KPDSAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp -CCCTTSEEEEECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred -CCCCCCeEEEECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 2358899999999999999999999999999999999999999999999864
No 9
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.85 E-value=3.2e-21 Score=172.58 Aligned_cols=114 Identities=22% Similarity=0.299 Sum_probs=91.1
Q ss_pred CCccCHHHHHHHHhC-CCCcEEEEeCChhhhhh-cCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHh
Q 009581 269 SGDLSPKSTLELLRG-KENAVLIDVRHEDLRER-DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIR 346 (531)
Q Consensus 269 ~~~ISp~El~elL~~-~~~avLIDVRs~eEf~~-GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~ 346 (531)
...|+++++.+++.+ .++.+|||||++.||.. ||||||+ |||+.++..+.....+ ..
T Consensus 21 ~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~--------~ip~~~l~~~~~~~~~--~~----------- 79 (139)
T 2hhg_A 21 IETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSF--------SCTRGMLEFWIDPQSP--YA----------- 79 (139)
T ss_dssp SEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCE--------ECCGGGHHHHHCTTST--TC-----------
T ss_pred cCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeE--------ECChHHHHHhcCccch--hh-----------
Confidence 357999999999863 36789999999999999 9999999 9998776543221100 00
Q ss_pred hhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceecccc
Q 009581 347 NLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (531)
Q Consensus 347 ~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p 404 (531)
+..++++++||+||++|.||..+++.|+.+||++|++|+|||.+|.++|+|++...+
T Consensus 80 -~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 136 (139)
T 2hhg_A 80 -KPIFQEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWAP 136 (139)
T ss_dssp -CGGGGSSSEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC----
T ss_pred -hccCCCCCeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCCC
Confidence 012358999999999999999999999999999999999999999999999988644
No 10
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.85 E-value=1.2e-21 Score=168.83 Aligned_cols=101 Identities=21% Similarity=0.308 Sum_probs=88.8
Q ss_pred CccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 009581 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (531)
Q Consensus 270 ~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk 349 (531)
..|+++++.+++.+ ++.+|||||++.||..||||||+ |+|+.++..++..
T Consensus 5 ~~i~~~~l~~~~~~-~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 54 (108)
T 1gmx_A 5 ECINVADAHQKLQE-KEAVLVDIRDPQSFAMGHAVQAF--------HLTNDTLGAFMRD--------------------- 54 (108)
T ss_dssp EEECHHHHHHHHHT-TCCEEEECSCHHHHHHCEETTCE--------ECCHHHHHHHHHH---------------------
T ss_pred cccCHHHHHHHHhC-CCCEEEEcCCHHHHHhCCCccCE--------eCCHHHHHHHHHh---------------------
Confidence 46999999998864 46899999999999999999999 9998766543332
Q ss_pred ccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceecc
Q 009581 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (531)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~ 402 (531)
++++++||+||++|.||..+++.|+.+||++|++|+|||.+|.++ +|++..
T Consensus 55 -l~~~~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~ 105 (108)
T 1gmx_A 55 -NDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVA 105 (108)
T ss_dssp -SCTTSCEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEE
T ss_pred -cCCCCCEEEEcCCCchHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCcccc
Confidence 257899999999999999999999999999999999999999999 998764
No 11
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.84 E-value=2.3e-21 Score=175.08 Aligned_cols=109 Identities=22% Similarity=0.352 Sum_probs=93.4
Q ss_pred CCccCHHHHHHHHhCCCCcEEEEeCChhhhhh-cC--CccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHH
Q 009581 269 SGDLSPKSTLELLRGKENAVLIDVRHEDLRER-DG--IPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVI 345 (531)
Q Consensus 269 ~~~ISp~El~elL~~~~~avLIDVRs~eEf~~-GH--IPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI 345 (531)
...|+++++.+++.+.++.+|||||++.||.. || ||||+ |||+.++.....
T Consensus 22 ~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAi--------nip~~~l~~~~~------------------ 75 (137)
T 1qxn_A 22 MVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYK--------HMSRGKLEPLLA------------------ 75 (137)
T ss_dssp SEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEE--------ECCTTTSHHHHH------------------
T ss_pred CcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCE--------EcchHHhhhHHh------------------
Confidence 35799999999986346789999999999999 99 99999 999877653100
Q ss_pred hhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccc
Q 009581 346 RNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSE 405 (531)
Q Consensus 346 ~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~ 405 (531)
+..++++++||+||++|.||..+++.|+.+||++|++|+|||.+|.++|+|++...+.
T Consensus 76 --~~~l~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~ 133 (137)
T 1qxn_A 76 --KSGLDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSHH 133 (137)
T ss_dssp --HHCCCTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCCCC
T ss_pred --hccCCCCCeEEEEcCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCccccccc
Confidence 1124689999999999999999999999999999999999999999999999986543
No 12
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.84 E-value=2.9e-21 Score=175.59 Aligned_cols=105 Identities=13% Similarity=0.178 Sum_probs=90.8
Q ss_pred cCHHHHHHHHhCC-CCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcc
Q 009581 272 LSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (531)
Q Consensus 272 ISp~El~elL~~~-~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~ 350 (531)
|+++++.+++..+ ++.+|||||++.||..||||||+ |||+.++..+... .
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~---------------------~ 52 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--------AMPIEDLVDRASS---------------------S 52 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCE--------ECCGGGHHHHHHT---------------------T
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCE--------EcCHHHHHHHHHh---------------------c
Confidence 7899999998643 46899999999999999999999 9998776543321 2
Q ss_pred cCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccc
Q 009581 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSE 405 (531)
Q Consensus 351 l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~ 405 (531)
++++++||+||++|.||..+++.|+.+||++|++|+|||.+|.++|+|++...+.
T Consensus 53 l~~~~~ivvyC~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~ 107 (141)
T 3ilm_A 53 LEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGIIES 107 (141)
T ss_dssp SCTTSEEEEECSSHHHHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC--
T ss_pred CCCCCeEEEEECCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCCCC
Confidence 3578999999999999999999999999999999999999999999999987643
No 13
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.84 E-value=1.2e-20 Score=186.33 Aligned_cols=115 Identities=15% Similarity=0.111 Sum_probs=97.9
Q ss_pred ccCHHHHHHHHhCCCCcEEEEeCChhhhh--------hcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHH
Q 009581 271 DLSPKSTLELLRGKENAVLIDVRHEDLRE--------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTA 342 (531)
Q Consensus 271 ~ISp~El~elL~~~~~avLIDVRs~eEf~--------~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~a 342 (531)
.|+++++.+++. +++.+|||||++.||. .||||||+ |+|+.++....+.++.. +++++.+..
T Consensus 148 ~i~~~~l~~~l~-~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~--------~ip~~~~~~~~~~~~~~-~~l~~~~~~ 217 (271)
T 1e0c_A 148 TASRDYLLGRLG-AADLAIWDARSPQEYRGEKVLAAKGGHIPGAV--------NFEWTAAMDPSRALRIR-TDIAGRLEE 217 (271)
T ss_dssp BCCHHHHHHHTT-CTTEEEEECSCHHHHTTSSCCSSSCSBCTTCE--------ECCGGGGEEGGGTTEEC-TTHHHHHHH
T ss_pred cccHHHHHHHhc-CCCcEEEEcCChhhcCCccCCCCcCCcCCCce--------eccHHHhCCCCCCCCCH-HHHHHHHHH
Confidence 368999998884 4678999999999999 99999999 99988876544444433 677777766
Q ss_pred HHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHc-CCceec
Q 009581 343 AVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKE-GLRIKE 401 (531)
Q Consensus 343 lgI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~a-GLPV~~ 401 (531)
+++ +++++||+||++|.||..+++.|+.+||++|++|+|||.+|.+. |+|+++
T Consensus 218 ~~~------~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~ 271 (271)
T 1e0c_A 218 LGI------TPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL 271 (271)
T ss_dssp TTC------CTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred cCC------CCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence 555 48999999999999999999999999999999999999999998 999863
No 14
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.83 E-value=5e-21 Score=174.43 Aligned_cols=108 Identities=18% Similarity=0.193 Sum_probs=93.1
Q ss_pred CccCHHHHHHHHhCC-CCcEEEEeCChhhhhhcCCccccccccccccccCcccccc-hhhhhhcCchhhHHHHHHHHHhh
Q 009581 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG-SVKKLLRGGRELDDTLTAAVIRN 347 (531)
Q Consensus 270 ~~ISp~El~elL~~~-~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~-~~~~Llk~p~eL~~~L~algI~~ 347 (531)
..|+++++.+++.+. ++.+|||||++.||..||||||+ |||+.++.. .+.
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~-------------------- 67 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAI--------SIPGNKINEDTTK-------------------- 67 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCE--------ECCGGGCSTTTTT--------------------
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCE--------ECCHHHHhHHHHh--------------------
Confidence 368999999998654 47899999999999999999999 999887753 222
Q ss_pred hcccCCCcEEEEEeCCC--cHHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccchhh
Q 009581 348 LKIVQDRSKVIVMDADG--TRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETAL 408 (531)
Q Consensus 348 Lk~l~kd~~IVVyC~sG--~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~~a~ 408 (531)
.++++++||+||++| .||..+++.|+.+|| +|++|+|||.+|+++|+|++...+.+.+
T Consensus 68 --~l~~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~~~~~~ 127 (144)
T 3nhv_A 68 --RLSKEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLGAKAD 127 (144)
T ss_dssp --TCCTTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSSGGGSC
T ss_pred --hCCCCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCCCCCcc
Confidence 235789999999999 699999999999999 6999999999999999999998665543
No 15
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.83 E-value=5.3e-21 Score=170.43 Aligned_cols=112 Identities=21% Similarity=0.255 Sum_probs=91.0
Q ss_pred CCccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhh
Q 009581 269 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (531)
Q Consensus 269 ~~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~L 348 (531)
...|+++++.+++. ++.+|||||++.||..||||||+ |||+..+... ..+++++++++.+
T Consensus 17 ~~~is~~e~~~~l~--~~~~lIDvR~~~e~~~ghIpgAi--------nip~~~~~~~--~~~~~~~~~~~~~-------- 76 (129)
T 1tq1_A 17 PSSVSVTVAHDLLL--AGHRYLDVRTPEEFSQGHACGAI--------NVPYMNRGAS--GMSKNTDFLEQVS-------- 76 (129)
T ss_dssp CEEEEHHHHHHHHH--HTCCEEEESCHHHHHHCCBTTBE--------ECCSCCCSTT--TCCCTTTHHHHHT--------
T ss_pred CcccCHHHHHHHhc--CCCEEEECCCHHHHhcCCCCCcE--------ECcHhhcccc--cccCCHHHHHHHH--------
Confidence 34799999999885 56899999999999999999999 9997554321 1222233333211
Q ss_pred cccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCcee
Q 009581 349 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 400 (531)
Q Consensus 349 k~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~ 400 (531)
+.++++++||+||++|.||..+++.|+.+||++|++|+|||.+|.++|+|++
T Consensus 77 ~~l~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 77 SHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp TTCCTTSSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred hhCCCCCeEEEECCCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence 2346899999999999999999999999999999999999999999999985
No 16
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.82 E-value=3.5e-20 Score=182.97 Aligned_cols=123 Identities=17% Similarity=0.214 Sum_probs=105.7
Q ss_pred CCccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccch---hhhhhcCchhhHHHHHHHHH
Q 009581 269 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGRELDDTLTAAVI 345 (531)
Q Consensus 269 ~~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~---~~~Llk~p~eL~~~L~algI 345 (531)
...|+++++.+++. +++.+|||||++.||..||||||+ |+|+.++... ...++++++.+.+.+..+|+
T Consensus 8 ~~~is~~~l~~~l~-~~~~~iiDvR~~~ey~~ghIpgA~--------~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi 78 (271)
T 1e0c_A 8 PLVIEPADLQARLS-APELILVDLTSAARYAEGHIPGAR--------FVDPKRTQLGQPPAPGLQPPREQLESLFGELGH 78 (271)
T ss_dssp CSEECHHHHHTTTT-CTTEEEEECSCHHHHHHCBSTTCE--------ECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTC
T ss_pred CceeeHHHHHHhcc-CCCeEEEEcCCcchhhhCcCCCCE--------ECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 34799999999884 467899999999999999999999 9998776543 33456677788888887776
Q ss_pred hhhcccCCCcEEEEEeCCCc-HHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccch
Q 009581 346 RNLKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSET 406 (531)
Q Consensus 346 ~~Lk~l~kd~~IVVyC~sG~-RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~~ 406 (531)
. ++++|||||++|. ||..+++.|+.+||++|++|+||+.+|+.+|+|++...+.+
T Consensus 79 ~------~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~~~ 134 (271)
T 1e0c_A 79 R------PEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELPAP 134 (271)
T ss_dssp C------TTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCCCC
T ss_pred C------CCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCCCC
Confidence 4 8999999999998 99999999999999999999999999999999998876553
No 17
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.82 E-value=1.5e-20 Score=166.41 Aligned_cols=102 Identities=17% Similarity=0.264 Sum_probs=88.7
Q ss_pred CccCHHHHHHHHhCC-CCcEEEEeCChhhh-hhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhh
Q 009581 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLR-ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRN 347 (531)
Q Consensus 270 ~~ISp~El~elL~~~-~~avLIDVRs~eEf-~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~ 347 (531)
..|+++++.+++.++ ++.+|||||++.|| ..||||||+ |||+.++...+..
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~--------nip~~~l~~~~~~------------------- 67 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAI--------AMPAKDLATRIGE------------------- 67 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCE--------ECCHHHHHHHGGG-------------------
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCE--------ECCHHHHHHHHhc-------------------
Confidence 369999999998654 35899999999998 999999999 9998776544332
Q ss_pred hcccCCCcEEEEEeCCCcH--HHHHHHHHHHccCCceEEecchHHHHHHcCCceecc
Q 009581 348 LKIVQDRSKVIVMDADGTR--SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (531)
Q Consensus 348 Lk~l~kd~~IVVyC~sG~R--S~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~ 402 (531)
++++++||+||++|.| |..+++.|+.+||+ |++|+|||.+|+.+|+|+.+.
T Consensus 68 ---l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~ 120 (124)
T 3flh_A 68 ---LDPAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHH 120 (124)
T ss_dssp ---SCTTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC-
T ss_pred ---CCCCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCcc
Confidence 3578999999999998 89999999999996 999999999999999999875
No 18
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.82 E-value=8.7e-20 Score=192.44 Aligned_cols=207 Identities=15% Similarity=0.116 Sum_probs=148.1
Q ss_pred ceehhhhhhhhcccceeccCCcee---------eEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHHHHHHHH
Q 009581 161 AAVDVLRNTIVALEESMTNGASFV---------VYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIEGL 231 (531)
Q Consensus 161 ~~~d~l~~~~~~~e~~~~~~~~~~---------~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~~~~egv 231 (531)
|+.+||++.+..-+..+++.+... .|--||.+..+..++..+ . .... ..++..
T Consensus 6 is~~~L~~~l~~~~~~ilD~r~~~~~~~~~~~~~y~~gHIPgAv~~~~~~l-~------------lp~~-----~~f~~~ 67 (423)
T 2wlr_A 6 LAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASWL-D------------KMST-----EQLNAW 67 (423)
T ss_dssp CCSCBCHHHHHHTTCEEEECSCHHHHHTCCSSTTCCCSBCTTCEECCGGGG-G------------GCCH-----HHHHHH
T ss_pred cCHHHHHHHhCCCCeEEEECCCcccccccccccccccCCCCCCccCCHHHh-c------------CCCH-----HHHHHH
Confidence 456777777654455677776543 233455555443322221 1 1111 125566
Q ss_pred hHhcCcCCCCCeeehhhhHhHHHHHHHHHHHHHhCCC----------C------------CccCHHHHHHHHhC------
Q 009581 232 ERSLGFDPNDPIVPFVVFLGTSATLWIFYWWWTYGGY----------S------------GDLSPKSTLELLRG------ 283 (531)
Q Consensus 232 ~k~lgv~~~dpVv~~~~~~G~~~~l~~~~~~~~~~g~----------~------------~~ISp~El~elL~~------ 283 (531)
...+|++.+++||+|... +. +.. +||.++.-|+ . ..++++++.+++..
T Consensus 68 ~~~lgi~~~~~vVvy~~~-~~--a~r-~~w~l~~~G~~~V~vl~Gg~~~~g~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 143 (423)
T 2wlr_A 68 IKQHNLKTDAPVALYGND-KD--VDA-VKTRLQKAGLTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAK 143 (423)
T ss_dssp HHHTTCCTTSCEEEESCH-HH--HHH-HHHHHHHTTCCCEEEBTTTTSCGGGCBCCTTGGGEECHHHHHHHHTTCCCTTC
T ss_pred HHHcCCCCCCeEEEECCC-CC--HHH-HHHHHHHcCCceeEeccchhhcCCCcccCCCCCcccCHHHHHHHhhccccccc
Confidence 667899999999987544 21 111 3444443222 1 24678888888753
Q ss_pred -CCCcEEEEeC--ChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCcEEEEE
Q 009581 284 -KENAVLIDVR--HEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVM 360 (531)
Q Consensus 284 -~~~avLIDVR--s~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~l~kd~~IVVy 360 (531)
.++.+|||+| ++.||..||||||+ |+|+.++.......+++++++++.+.++++ +++++||+|
T Consensus 144 ~~~~~~liDvR~~~~~e~~~ghIpgA~--------nip~~~~~~~~~~~~~~~~~l~~~~~~~gi------~~~~~ivvy 209 (423)
T 2wlr_A 144 PAGDWKVIEAAWGAPKLYLISHIPGAD--------YIDTNEVESEPLWNKVSDEQLKAMLAKHGI------RHDTTVILY 209 (423)
T ss_dssp CSSCEEEEEEESSSCSHHHHCBCTTCE--------EEEGGGTEETTTTEECCHHHHHHHHHHTTC------CTTSEEEEE
T ss_pred cCCCeEEEEecCCCchhhccCcCCCcE--------EcCHHHhccCCCCCCCCHHHHHHHHHHcCC------CCCCeEEEE
Confidence 2478999999 99999999999999 999887755334567788888888877776 489999999
Q ss_pred eCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccc
Q 009581 361 DADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (531)
Q Consensus 361 C~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~ 403 (531)
|++|.||..+++.|+.+||++|++|+|||.+|...|+|++++.
T Consensus 210 C~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g~ 252 (423)
T 2wlr_A 210 GRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGT 252 (423)
T ss_dssp CSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCSS
T ss_pred CCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccCC
Confidence 9999999999999999999999999999999999999998853
No 19
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.81 E-value=1.6e-20 Score=186.57 Aligned_cols=113 Identities=21% Similarity=0.245 Sum_probs=87.2
Q ss_pred cCHHHHHHHHhCCCCcEEEEeCChhhh-----------hhcCCccccccccccccccCcccccchhhhhhcCchhhHHHH
Q 009581 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340 (531)
Q Consensus 272 ISp~El~elL~~~~~avLIDVRs~eEf-----------~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L 340 (531)
|+++++.+++.+ ++.+|||||++.|| ..||||||+ |||+.++.. ...+++++++.+.+
T Consensus 154 i~~~e~~~~~~~-~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~--------nip~~~~~~--~~~~~~~~~l~~~~ 222 (280)
T 1urh_A 154 VKVTDVLLASHE-NTAQIIDARPAARFNAEVDEPRPGLRRGHIPGAL--------NVPWTELVR--EGELKTTDELDAIF 222 (280)
T ss_dssp CCHHHHHHHHHH-TCSEEEECSCHHHHSSCCCC----CCSSSCTTCE--------ECCGGGGBS--SSSBCCHHHHHHHH
T ss_pred EcHHHHHHHhcC-CCcEEEeCCchhhcccccCCCCCCCcCccCCCce--------EeeHHHhhc--CCccCCHHHHHHHH
Confidence 899999998853 57899999999999 689999999 999888765 22344556666655
Q ss_pred HHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHH-cCCceec
Q 009581 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKE 401 (531)
Q Consensus 341 ~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~-aGLPV~~ 401 (531)
.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.+ .++|+++
T Consensus 223 ~~~~~------~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~ 278 (280)
T 1urh_A 223 FGRGV------SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP 278 (280)
T ss_dssp HTTTC------CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-----------
T ss_pred HHcCC------CCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCcee
Confidence 54444 5899999999999999999999999999999999999999987 5999876
No 20
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.80 E-value=1.2e-20 Score=159.02 Aligned_cols=93 Identities=22% Similarity=0.232 Sum_probs=76.4
Q ss_pred CccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 009581 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (531)
Q Consensus 270 ~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk 349 (531)
..|+++++.+++. ++.+|||||++.||..||||||+ |+|+.++...+.
T Consensus 2 ~~is~~~l~~~~~--~~~~liDvR~~~e~~~ghi~gAi--------~ip~~~l~~~~~---------------------- 49 (94)
T 1wv9_A 2 RKVRPEELPALLE--EGVLVVDVRPADRRSTPLPFAAE--------WVPLEKIQKGEH---------------------- 49 (94)
T ss_dssp CEECGGGHHHHHH--TTCEEEECCCC--CCSCCSSCCE--------ECCHHHHTTTCC----------------------
T ss_pred CcCCHHHHHHHHH--CCCEEEECCCHHHHhcccCCCCE--------ECCHHHHHHHHH----------------------
Confidence 3588999999886 37899999999999999999999 999877654332
Q ss_pred ccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcC
Q 009581 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (531)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aG 396 (531)
.+++ ++||+||++|.||..+++.|+.+||+ |++|+||+.+|.++|
T Consensus 50 ~l~~-~~ivvyC~~g~rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 50 GLPR-RPLLLVCEKGLLSQVAALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp CCCS-SCEEEECSSSHHHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred hCCC-CCEEEEcCCCChHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 2357 89999999999999999999999998 999999999998765
No 21
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.80 E-value=4.2e-20 Score=185.62 Aligned_cols=116 Identities=15% Similarity=0.092 Sum_probs=97.8
Q ss_pred ccCHHHHHHHHhCCCCcEEEEeCChhhh------------hhcCCccccccccccccccCcccccchhhhhhcCchhhHH
Q 009581 271 DLSPKSTLELLRGKENAVLIDVRHEDLR------------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDD 338 (531)
Q Consensus 271 ~ISp~El~elL~~~~~avLIDVRs~eEf------------~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~ 338 (531)
.++++++.+++. .++.+|||||++.|| +.||||||+ |||+.++....+ .+++++++.+
T Consensus 161 ~i~~~e~~~~~~-~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~--------nip~~~l~~~~~-~~~~~~~l~~ 230 (296)
T 1rhs_A 161 LKTYEQVLENLE-SKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSV--------NMPFMNFLTEDG-FEKSPEELRA 230 (296)
T ss_dssp EECHHHHHHHHH-HCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCE--------ECCGGGGBCTTS-CBCCHHHHHH
T ss_pred EEcHHHHHHHhc-CCCceEEeCCchhhcccccCCcccCCCcCccCCCCE--------eecHHHhcCCCC-cCCCHHHHHH
Confidence 478999998885 357899999999999 789999999 999888764322 2445566666
Q ss_pred HHHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHH-cCCceecc
Q 009581 339 TLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKEL 402 (531)
Q Consensus 339 ~L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~-aGLPV~~~ 402 (531)
.+...++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.. .++|++..
T Consensus 231 ~~~~~~~------~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 289 (296)
T 1rhs_A 231 MFEAKKV------DLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVS 289 (296)
T ss_dssp HHHHTTC------CTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEB
T ss_pred HHHHcCC------CCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccC
Confidence 6655444 5899999999999999999999999999999999999999998 89999875
No 22
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.80 E-value=7.5e-20 Score=181.68 Aligned_cols=122 Identities=16% Similarity=0.213 Sum_probs=103.3
Q ss_pred CccCHHHHHHHHhCCCCcEEEEeC----------ChhhhhhcCCccccccccccccccCcccccch---hhhhhcCchhh
Q 009581 270 GDLSPKSTLELLRGKENAVLIDVR----------HEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGREL 336 (531)
Q Consensus 270 ~~ISp~El~elL~~~~~avLIDVR----------s~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~---~~~Llk~p~eL 336 (531)
..|+++++.+++. +++.+||||| ++.||..||||||+ |+|+.++... ...++++++.+
T Consensus 4 ~~is~~~l~~~l~-~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi--------~ip~~~l~~~~~~~~~~~~~~~~~ 74 (280)
T 1urh_A 4 WFVGADWLAEHID-DPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAV--------FFDIEALSDHTSPLPHMLPRPETF 74 (280)
T ss_dssp CEECHHHHHTTTT-CTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCE--------ECCGGGGSCSSSSSSSCCCCHHHH
T ss_pred ceeeHHHHHHhcC-CCCeEEEEeeccCCcccccchhhhhhhCcCCCCE--------ECCHHHhcCCCCCCCCCCCCHHHH
Confidence 3689999998884 4688999999 78999999999999 8998766432 22355667788
Q ss_pred HHHHHHHHHhhhcccCCCcEEEEEeCCCcH-HHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccch
Q 009581 337 DDTLTAAVIRNLKIVQDRSKVIVMDADGTR-SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSET 406 (531)
Q Consensus 337 ~~~L~algI~~Lk~l~kd~~IVVyC~sG~R-S~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~~ 406 (531)
++.+..+|+ +++++|||||++|.| |..+++.|+.+||++|++|+||+.+|..+|+|++...+.+
T Consensus 75 ~~~~~~~gi------~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~ 139 (280)
T 1urh_A 75 AVAMRELGV------NQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVEL 139 (280)
T ss_dssp HHHHHHTTC------CTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCCCC
T ss_pred HHHHHHcCC------CCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCCCC
Confidence 888877776 489999999999998 9999999999999999999999999999999999876543
No 23
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.80 E-value=2.6e-19 Score=177.97 Aligned_cols=116 Identities=18% Similarity=0.194 Sum_probs=96.6
Q ss_pred cCHHHHHHHHhC--CCCcEEEEeCChhhhh----------------hcCCccccccccccccccCcccccchhhhhhcCc
Q 009581 272 LSPKSTLELLRG--KENAVLIDVRHEDLRE----------------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGG 333 (531)
Q Consensus 272 ISp~El~elL~~--~~~avLIDVRs~eEf~----------------~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p 333 (531)
|+++++.+++.. ..+..|||||++.||. .||||||+ |+|+.++....+ .++++
T Consensus 148 i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~~-~~~~~ 218 (285)
T 1uar_A 148 AYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAK--------NIPWAKAVNPDG-TFKSA 218 (285)
T ss_dssp ECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCE--------ECCGGGGBCTTS-CBCCH
T ss_pred EcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCcc--------ccCHHHhcCCCC-cCCCH
Confidence 889999998730 1234799999999997 79999999 999887764332 45667
Q ss_pred hhhHHHHHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHH-HccCCceEEecchHHHHH-HcCCceecc
Q 009581 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLR-KLGVMRAFLVQGGFQSWV-KEGLRIKEL 402 (531)
Q Consensus 334 ~eL~~~L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~-~lGf~nV~~L~GG~~aW~-~aGLPV~~~ 402 (531)
+++.+.+..+|+ +++++||+||++|.||..+++.|+ .+||++|++|+|||.+|. .+|+|++++
T Consensus 219 ~~l~~~~~~~g~------~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 283 (285)
T 1uar_A 219 EELRALYEPLGI------TKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKG 283 (285)
T ss_dssp HHHHHHHGGGTC------CTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred HHHHHHHHHcCC------CCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccC
Confidence 777776665555 589999999999999999999999 999999999999999998 799999875
No 24
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.80 E-value=2.9e-20 Score=188.22 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=96.9
Q ss_pred cCHHHHHHHHhCCCCcEEEEeCChhhh-----------hhcCCccccccccccccccCcccccchhhhhhcCchhhHHHH
Q 009581 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340 (531)
Q Consensus 272 ISp~El~elL~~~~~avLIDVRs~eEf-----------~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L 340 (531)
++++++.+++. .++.+|||||+++|| +.||||||+ |||+.++....+ .+++++++.+.+
T Consensus 177 i~~~e~~~~~~-~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAi--------niP~~~l~~~~~-~~~~~~~l~~~~ 246 (302)
T 3olh_A 177 KTYEDIKENLE-SRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTV--------NIPFTDFLSQEG-LEKSPEEIRHLF 246 (302)
T ss_dssp ECHHHHHHHHH-HCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCE--------ECCGGGGBCSSS-CBCCHHHHHHHH
T ss_pred ecHHHHHHhhc-CCCcEEEecCCHHHccccccCCCcCCcCccCCCce--------ecCHHHhcCCCC-ccCCHHHHHHHH
Confidence 67888888875 367899999999999 789999999 999988765443 356778888877
Q ss_pred HHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCce
Q 009581 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRI 399 (531)
Q Consensus 341 ~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV 399 (531)
.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.++++|.
T Consensus 247 ~~~~~------~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 247 QEKKV------DLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp HHTTC------CTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred HhcCC------CCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 76665 489999999999999999999999999999999999999999998874
No 25
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.80 E-value=5.6e-20 Score=161.02 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=86.8
Q ss_pred ccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcc
Q 009581 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (531)
Q Consensus 271 ~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~ 350 (531)
.|+++++.+++.+.++.+|||||++.||..||||||+ |+|+.++......++ ..+...+.... . -..
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~~~~~~~~~~---~~~~~~l~~~~-~-~~~ 68 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHAL--------HIPLKHLERRDAESL---KLLKEAIWEEK-Q-GTQ 68 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSE--------ECCHHHHHTTCHHHH---HHHHHHHHHHH-T-TC-
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCce--------eCChHHHhhhhhhhH---HHHHHHHhhhc-c-ccc
Confidence 5899999999865556999999999999999999999 999887765443321 11111111100 0 001
Q ss_pred cCCCcEEEEEeCCCcHHHHHHHHHHHc------cCCceEEecchHHHHHHcCCc
Q 009581 351 VQDRSKVIVMDADGTRSKGIARSLRKL------GVMRAFLVQGGFQSWVKEGLR 398 (531)
Q Consensus 351 l~kd~~IVVyC~sG~RS~~AA~~L~~l------Gf~nV~~L~GG~~aW~~aGLP 398 (531)
.+++++||+||++|.||..+++.|+.+ ||.+|++|+|||.+|.++..|
T Consensus 69 ~~~~~~ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 69 EGAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp --CCEEEEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 135669999999999999999999999 688999999999999987655
No 26
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.79 E-value=2.1e-19 Score=177.92 Aligned_cols=113 Identities=21% Similarity=0.189 Sum_probs=94.5
Q ss_pred cCHHHHHHHHhCCCCcEEEEeCChhhhhh----------------cCCccccccccccccccCcccccchhhhhhcCchh
Q 009581 272 LSPKSTLELLRGKENAVLIDVRHEDLRER----------------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRE 335 (531)
Q Consensus 272 ISp~El~elL~~~~~avLIDVRs~eEf~~----------------GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~e 335 (531)
++++++.+++.+ . . |||||++.||.. ||||||+ |+|+.++.... ..++++++
T Consensus 146 ~~~~el~~~~~~-~-~-liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-~~~~~~~~ 213 (277)
T 3aay_A 146 AFRDEVLAAINV-K-N-LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAI--------NVPWSRAANED-GTFKSDEE 213 (277)
T ss_dssp ECHHHHHHTTTT-S-E-EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCE--------ECCGGGGBCTT-SCBCCHHH
T ss_pred cCHHHHHHhcCC-C-C-EEEeCChHHeeeeecccccccccccccCCcCCCce--------ecCHHHhcCCC-CcCCCHHH
Confidence 668888887742 2 3 999999999985 9999999 99987665432 23556777
Q ss_pred hHHHHHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHH-ccCCceEEecchHHHHHH-cCCceecc
Q 009581 336 LDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRK-LGVMRAFLVQGGFQSWVK-EGLRIKEL 402 (531)
Q Consensus 336 L~~~L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~-lGf~nV~~L~GG~~aW~~-aGLPV~~~ 402 (531)
+.+.+.++++ +++++||+||++|.||..+++.|+. +||++|++|+|||.+|.+ +|+|++.+
T Consensus 214 l~~~~~~~~~------~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 214 LAKLYADAGL------DNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp HHHHHHHHTC------CTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred HHHHHHHcCC------CCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 8887777666 4899999999999999999999995 999999999999999998 99999864
No 27
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.79 E-value=3.8e-20 Score=168.34 Aligned_cols=119 Identities=29% Similarity=0.402 Sum_probs=88.9
Q ss_pred CCCccCHHHHHHHHhCCCCcEEEEeCChhhhhh-cCC------ccccccccccccccCcccccchhhhhhcC-chhhHHH
Q 009581 268 YSGDLSPKSTLELLRGKENAVLIDVRHEDLRER-DGI------PDLRRGARFRYASVYLPEVGGSVKKLLRG-GRELDDT 339 (531)
Q Consensus 268 ~~~~ISp~El~elL~~~~~avLIDVRs~eEf~~-GHI------PGAi~a~~~~~~nIPl~eL~~~~~~Llk~-p~eL~~~ 339 (531)
|.+.|+++++.+++.++++.+|||||++.||.. ||| |||+ |||+.++.... .+. .+++...
T Consensus 3 ~~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv--------~ip~~~~~~~~---~~~~~~~l~~~ 71 (148)
T 2fsx_A 3 YAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVV--------YVEWATSDGTH---NDNFLAELRDR 71 (148)
T ss_dssp CSEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCE--------ECCSBCTTSCB---CTTHHHHHHHH
T ss_pred ccccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcE--------Eeeeecccccc---CHHHHHHHHHH
Confidence 566899999999986446789999999999997 999 9999 99987621100 000 0112222
Q ss_pred HHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchH------------HHHHHcCCceeccc
Q 009581 340 LTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF------------QSWVKEGLRIKELK 403 (531)
Q Consensus 340 L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~------------~aW~~aGLPV~~~~ 403 (531)
+...++ +++++|||||++|.||..+++.|+.+||++|++|+||| .+|+++|+|++...
T Consensus 72 l~~~~~------~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~ 141 (148)
T 2fsx_A 72 IPADAD------QHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR 141 (148)
T ss_dssp CC-------------CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred HhhccC------CCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence 222233 47899999999999999999999999999999999999 69999999998753
No 28
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.79 E-value=2e-19 Score=183.42 Aligned_cols=120 Identities=10% Similarity=0.131 Sum_probs=102.2
Q ss_pred ccCHHHHHHHHhCCCCcEEEEeCChhh-hhhcCCccccccccccccccCcc-cccchhhhhhcCchhhHHHHHHHHHhhh
Q 009581 271 DLSPKSTLELLRGKENAVLIDVRHEDL-RERDGIPDLRRGARFRYASVYLP-EVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (531)
Q Consensus 271 ~ISp~El~elL~~~~~avLIDVRs~eE-f~~GHIPGAi~a~~~~~~nIPl~-eL~~~~~~Llk~p~eL~~~L~algI~~L 348 (531)
.|+++++.+++. +++.+|||||++.| |..||||||+ |+|+. .+.......+++++++++.+..+|+.
T Consensus 41 ~is~~~l~~~l~-~~~~~iiDvR~~~e~y~~gHIpGAi--------~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~-- 109 (318)
T 3hzu_A 41 LVTADWLSAHMG-APGLAIVESDEDVLLYDVGHIPGAV--------KIDWHTDLNDPRVRDYINGEQFAELMDRKGIA-- 109 (318)
T ss_dssp EECHHHHHHHTT-CTTEEEEECCSSTTSGGGCBCTTEE--------ECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCC--
T ss_pred eecHHHHHHhcc-CCCEEEEECCCChhHHhcCcCCCCe--------EeCchhhhccCcccCCCCHHHHHHHHHHcCCC--
Confidence 599999999884 46799999999876 9999999999 89864 23333344566778888888877774
Q ss_pred cccCCCcEEEEEeCCCc-HHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccc
Q 009581 349 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSE 405 (531)
Q Consensus 349 k~l~kd~~IVVyC~sG~-RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~ 405 (531)
++++|||||++|. ||.++++.|+.+||++|++|+|||.+|+++|+|+++..+.
T Consensus 110 ----~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~ 163 (318)
T 3hzu_A 110 ----RDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPT 163 (318)
T ss_dssp ----TTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCCC
T ss_pred ----CCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCCCC
Confidence 8999999999887 9999999999999999999999999999999999986553
No 29
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.78 E-value=5.9e-20 Score=159.37 Aligned_cols=99 Identities=19% Similarity=0.278 Sum_probs=83.3
Q ss_pred ccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcc
Q 009581 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (531)
Q Consensus 271 ~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~ 350 (531)
.|+++++ +.++.+|||||++.||..||||||+ |+|+.++...+.. .+
T Consensus 6 ~is~~el-----~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~--------------~~------ 52 (110)
T 2k0z_A 6 AISLEEV-----NFNDFIVVDVRELDEYEELHLPNAT--------LISVNDQEKLADF--------------LS------ 52 (110)
T ss_dssp EEETTTC-----CGGGSEEEEEECHHHHHHSBCTTEE--------EEETTCHHHHHHH--------------HH------
T ss_pred eeCHHHh-----ccCCeEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHHh--------------cc------
Confidence 4566664 2357899999999999999999999 9998776543321 12
Q ss_pred cCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccc
Q 009581 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (531)
Q Consensus 351 l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~ 403 (531)
++++++||+||++|.||..+++.|+.+||++ ++|+||+.+|.++|+|++.+.
T Consensus 53 ~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~ 104 (110)
T 2k0z_A 53 QHKDKKVLLHCRAGRRALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDD 104 (110)
T ss_dssp SCSSSCEEEECSSSHHHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred cCCCCEEEEEeCCCchHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCC
Confidence 2588999999999999999999999999999 999999999999999998764
No 30
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.78 E-value=1.4e-19 Score=162.28 Aligned_cols=115 Identities=19% Similarity=0.206 Sum_probs=89.1
Q ss_pred CCCccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCC-------ccccccccccccccCcccccchhhhhhcCchhhHHHH
Q 009581 268 YSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGI-------PDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340 (531)
Q Consensus 268 ~~~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHI-------PGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L 340 (531)
....|+++++.+++.++++.+|||||+++||..+|+ |||+ |||+.++.. . .+++ .+
T Consensus 3 ~~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~--------~ip~~~~~~--~------~~~~-~l 65 (134)
T 1vee_A 3 SGSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAV--------STVYNGEDK--P------GFLK-KL 65 (134)
T ss_dssp CSCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCE--------ECCCCGGGH--H------HHHH-HH
T ss_pred CCCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceE--------EeecccccC--h------hHHH-HH
Confidence 446799999999886446789999999999986444 6899 999765421 0 1111 11
Q ss_pred HHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchH---HHHHHcCCceecccc
Q 009581 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF---QSWVKEGLRIKELKS 404 (531)
Q Consensus 341 ~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~---~aW~~aGLPV~~~~p 404 (531)
.+. + ..+++++|||||++|.||..|++.|+.+||++|++|.||| .+|+++|+|++....
T Consensus 66 ~~~----~-~~~~~~~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~ 127 (134)
T 1vee_A 66 SLK----F-KDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKK 127 (134)
T ss_dssp HTT----C-SCGGGCEEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCCC
T ss_pred HHH----h-CCCCCCEEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCCC
Confidence 100 0 0147899999999999999999999999999999999999 789999999988643
No 31
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.78 E-value=4e-19 Score=178.44 Aligned_cols=125 Identities=21% Similarity=0.308 Sum_probs=105.2
Q ss_pred CCCccCHHHHHHHHhCC---CCcEEEEeC--------ChhhhhhcCCccccccccccccccCcccccch---hhhhhcCc
Q 009581 268 YSGDLSPKSTLELLRGK---ENAVLIDVR--------HEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGG 333 (531)
Q Consensus 268 ~~~~ISp~El~elL~~~---~~avLIDVR--------s~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~---~~~Llk~p 333 (531)
|...|+++++.+++.+. ++.+||||| ++.||..||||||+ |+|+.++... ...+++++
T Consensus 6 ~~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi--------~ip~~~l~~~~~~~~~~lp~~ 77 (296)
T 1rhs_A 6 YRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGAS--------FFDIEECRDKASPYEVMLPSE 77 (296)
T ss_dssp CCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCE--------ECCTTTSSCTTSSSSSCCCCH
T ss_pred cCceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCE--------EeCHHHhcCCCCCCCCCCCCH
Confidence 44579999999998642 578999999 68999999999999 8998776543 34566777
Q ss_pred hhhHHHHHHHHHhhhcccCCCcEEEEEeCC--CcH-HHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccch
Q 009581 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDAD--GTR-SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSET 406 (531)
Q Consensus 334 ~eL~~~L~algI~~Lk~l~kd~~IVVyC~s--G~R-S~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~~ 406 (531)
+.+++.+..+++. ++++|||||++ |.+ +.++++.|+.+||++|++|+||+.+|+.+|+|++...+..
T Consensus 78 ~~~~~~l~~lgi~------~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~ 147 (296)
T 1rhs_A 78 AGFADYVGSLGIS------NDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRP 147 (296)
T ss_dssp HHHHHHHHHTTCC------TTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCCCC
T ss_pred HHHHHHHHHcCCC------CCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCCCCC
Confidence 7888888777764 89999999998 876 8899999999999999999999999999999998875543
No 32
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.77 E-value=1.2e-19 Score=166.58 Aligned_cols=108 Identities=20% Similarity=0.331 Sum_probs=90.5
Q ss_pred CccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 009581 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (531)
Q Consensus 270 ~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk 349 (531)
..|+++++.+++ +.++.+|||||+++||..||||||+ |||+.++..++.+++.
T Consensus 28 ~~Is~~el~~~l-~~~~~~lIDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~l~~------------------ 80 (152)
T 1t3k_A 28 SYITSTQLLPLH-RRPNIAIIDVRDEERNYDGHIAGSL--------HYASGSFDDKISHLVQ------------------ 80 (152)
T ss_dssp EEECTTTTTTCC-CCTTEEEEEESCSHHHHSSCCCSSE--------EECCSSSSTTHHHHHH------------------
T ss_pred ceECHHHHHHHh-cCCCEEEEECCChhhccCccCCCCE--------ECCHHHHHHHHHHHHH------------------
Confidence 478999988877 3467899999999999999999999 9998877655443321
Q ss_pred ccCCCcEEEEEeC-CCcHHHHHHHHHHH--------ccCCceEEecchHHHHHHcCCceecccc
Q 009581 350 IVQDRSKVIVMDA-DGTRSKGIARSLRK--------LGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (531)
Q Consensus 350 ~l~kd~~IVVyC~-sG~RS~~AA~~L~~--------lGf~nV~~L~GG~~aW~~aGLPV~~~~p 404 (531)
.++++++||+||+ +|.||..+++.|.+ +||++|++|+|||.+|.++|+|+++..+
T Consensus 81 ~~~~~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 144 (152)
T 1t3k_A 81 NVKDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE 144 (152)
T ss_dssp TCCSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred hcCCCCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCC
Confidence 2357899999999 99999999988753 8999999999999999999999988644
No 33
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.76 E-value=2.5e-18 Score=175.36 Aligned_cols=112 Identities=20% Similarity=0.223 Sum_probs=92.2
Q ss_pred cCHHHHHHHHhCCCCcEEEEeCChhhhhh----------------cCCccccccccccccccCcccccchhhhhhcCchh
Q 009581 272 LSPKSTLELLRGKENAVLIDVRHEDLRER----------------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRE 335 (531)
Q Consensus 272 ISp~El~elL~~~~~avLIDVRs~eEf~~----------------GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~e 335 (531)
++++++.+++.+ . +|||||+++||.. ||||||+ |||+.++....+ .++++++
T Consensus 181 i~~~el~~~l~~--~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~--------niP~~~~~~~~g-~~~~~~~ 248 (318)
T 3hzu_A 181 AFRDDVLAILGA--Q-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAV--------HIPWGKAADESG-RFRSREE 248 (318)
T ss_dssp CCHHHHHHHTTT--S-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCE--------ECCGGGGBCTTS-CBCCHHH
T ss_pred ccHHHHHHhhcC--C-eEEecCCHHHhcccccCccccccccCCcCcCCCCee--------ecCHHHhcCCCC-cCCCHHH
Confidence 578899988742 3 9999999999998 9999999 999877654333 2444555
Q ss_pred hHHHHHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHH-ccCCceEEecchHHHHHH-cCCceeccc
Q 009581 336 LDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRK-LGVMRAFLVQGGFQSWVK-EGLRIKELK 403 (531)
Q Consensus 336 L~~~L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~-lGf~nV~~L~GG~~aW~~-aGLPV~~~~ 403 (531)
+.+.+ ..++++++||+||++|.||..++..|++ +||++|++|+|||.+|.+ .|+|++++.
T Consensus 249 l~~~~--------~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~ 310 (318)
T 3hzu_A 249 LERLY--------DFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGE 310 (318)
T ss_dssp HHHHT--------TTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSS
T ss_pred HHHHh--------cCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence 55543 2346899999999999999999999997 999999999999999995 799999863
No 34
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.76 E-value=1.4e-18 Score=175.98 Aligned_cols=124 Identities=19% Similarity=0.281 Sum_probs=101.6
Q ss_pred CCccCHHHHHHHHhCC---CCcEEEEeC---------ChhhhhhcCCccccccccccccccCcccccc---hhhhhhcCc
Q 009581 269 SGDLSPKSTLELLRGK---ENAVLIDVR---------HEDLRERDGIPDLRRGARFRYASVYLPEVGG---SVKKLLRGG 333 (531)
Q Consensus 269 ~~~ISp~El~elL~~~---~~avLIDVR---------s~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~---~~~~Llk~p 333 (531)
...|+++++.+++.+. ++.+||||| ++.||..||||||+ |+|+.++.. ....+++++
T Consensus 21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi--------~i~~~~~~~~~~~~~~~lp~~ 92 (302)
T 3olh_A 21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAA--------FFDIDQCSDRTSPYDHMLPGA 92 (302)
T ss_dssp CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCE--------ECCTTTSSCSSCSSSSCCCCH
T ss_pred CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCe--------EeCHHHhcCcCCCCCCCCCCH
Confidence 3469999999998643 379999999 78999999999999 888765532 234455667
Q ss_pred hhhHHHHHHHHHhhhcccCCCcEEEEEeCC---CcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccch
Q 009581 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDAD---GTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSET 406 (531)
Q Consensus 334 ~eL~~~L~algI~~Lk~l~kd~~IVVyC~s---G~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~~ 406 (531)
+.+++.+..+|+. ++++|||||++ +.+|.+++|.|+.+||++|++|+||+.+|+++|+|++...+.+
T Consensus 93 ~~~~~~~~~lgi~------~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~ 162 (302)
T 3olh_A 93 EHFAEYAGRLGVG------AATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGKSQP 162 (302)
T ss_dssp HHHHHHHHHTTCC------SSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSCCCC
T ss_pred HHHHHHHHHcCCC------CCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCCCCc
Confidence 7888888888774 89999999964 3479999999999999999999999999999999998875443
No 35
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.76 E-value=8.1e-19 Score=173.76 Aligned_cols=120 Identities=16% Similarity=0.189 Sum_probs=99.2
Q ss_pred ccCHHHHHHHHhCCCCcEEEEeCC-hhhhhhcCCccccccccccccccCccccc-chhhhhhcCchhhHHHHHHHHHhhh
Q 009581 271 DLSPKSTLELLRGKENAVLIDVRH-EDLRERDGIPDLRRGARFRYASVYLPEVG-GSVKKLLRGGRELDDTLTAAVIRNL 348 (531)
Q Consensus 271 ~ISp~El~elL~~~~~avLIDVRs-~eEf~~GHIPGAi~a~~~~~~nIPl~eL~-~~~~~Llk~p~eL~~~L~algI~~L 348 (531)
.|+++++.+++. +++.+|||||+ +.||..||||||+ |+|+..+. ......+++++.+++.+..+|+
T Consensus 7 ~is~~~l~~~l~-~~~~~liDvR~~~~ey~~ghIpgA~--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi--- 74 (277)
T 3aay_A 7 LVSADWAESNLH-APKVVFVEVDEDTSAYDRDHIAGAI--------KLDWRTDLQDPVKRDFVDAQQFSKLLSERGI--- 74 (277)
T ss_dssp EECHHHHHTTTT-CTTEEEEEEESSSHHHHHCBSTTCE--------EEETTTTTBCSSSSSBCCHHHHHHHHHHHTC---
T ss_pred eEcHHHHHHHhC-CCCEEEEEcCCChhhHhhCCCCCcE--------EecccccccCCCCCCCCCHHHHHHHHHHcCC---
Confidence 589999998874 45789999998 8999999999999 88876432 2222345566677777777776
Q ss_pred cccCCCcEEEEEeCCCc-HHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccc
Q 009581 349 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSE 405 (531)
Q Consensus 349 k~l~kd~~IVVyC~sG~-RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~ 405 (531)
+++++|||||++|. +|..+++.|+.+||++|++|+||+.+|..+|+|++...+.
T Consensus 75 ---~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~ 129 (277)
T 3aay_A 75 ---ANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVS 129 (277)
T ss_dssp ---CTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCCC
T ss_pred ---CCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCCC
Confidence 48999999999875 7899999999999999999999999999999999887553
No 36
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.75 E-value=8.5e-19 Score=154.30 Aligned_cols=108 Identities=19% Similarity=0.302 Sum_probs=79.0
Q ss_pred CccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchh--hhhhcC--------------c
Q 009581 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSV--KKLLRG--------------G 333 (531)
Q Consensus 270 ~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~--~~Llk~--------------p 333 (531)
..|+++++.+ .++.+|||||++.||..||||||+ |+|+.++.... +.++.. .
T Consensus 5 ~~i~~~el~~----~~~~~iiDvR~~~e~~~ghIpgA~--------nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (134)
T 3g5j_A 5 SVIKIEKALK----LDKVIFVDVRTEGEYEEDHILNAI--------NMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVS 72 (134)
T ss_dssp CEECHHHHTT----CTTEEEEECSCHHHHHHCCCTTCE--------ECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHG
T ss_pred cccCHHHHHh----cCCcEEEEcCCHHHHhcCCCCCCE--------EcCccchhhhhcccceeeecChhHHHhccccccc
Confidence 4688888754 478999999999999999999999 99986543210 000000 0
Q ss_pred hhhHHHHHHHHHhhhcccCCC-cEEEEEe-CCCcHHHHHHHHHHHccCCceEEecchHHHHHHc
Q 009581 334 RELDDTLTAAVIRNLKIVQDR-SKVIVMD-ADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKE 395 (531)
Q Consensus 334 ~eL~~~L~algI~~Lk~l~kd-~~IVVyC-~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~a 395 (531)
..+.+.... +..++++ ++||+|| ++|.||..+++.|+.+|| +|++|+|||.+|++.
T Consensus 73 ~~~~~~~~~-----~~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 73 YKLKDIYLQ-----AAELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF 130 (134)
T ss_dssp GGHHHHHHH-----HHHHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred ccHHHHHHH-----HHHhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence 011111111 1123467 9999999 699999999999999999 999999999999875
No 37
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.75 E-value=1e-18 Score=186.11 Aligned_cols=100 Identities=25% Similarity=0.391 Sum_probs=89.1
Q ss_pred ccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcc
Q 009581 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (531)
Q Consensus 271 ~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~ 350 (531)
.++++++.+++. .++.+|||||++.||..||||||+ |+|+.++..++..
T Consensus 375 ~i~~~~l~~~~~-~~~~~lvDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~---------------------- 423 (474)
T 3tp9_A 375 NVSPDEVRGALA-QQGLWLLDVRNVDEWAGGHLPQAH--------HIPLSKLAAHIHD---------------------- 423 (474)
T ss_dssp EECHHHHHHTTT-TTCCEEEECSCHHHHHHCBCTTCE--------ECCHHHHTTTGGG----------------------
T ss_pred ccCHHHHHHHhc-CCCcEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHhc----------------------
Confidence 588999998874 368899999999999999999999 9998877654432
Q ss_pred cCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceec
Q 009581 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (531)
Q Consensus 351 l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~ 401 (531)
++++++||+||++|.||..+++.|+.+||++|++|+|||.+|.++|+|+++
T Consensus 424 l~~~~~vvv~C~~G~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 424 VPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp SCSSSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence 357899999999999999999999999999999999999999999999863
No 38
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.75 E-value=6.4e-19 Score=145.51 Aligned_cols=84 Identities=19% Similarity=0.228 Sum_probs=70.7
Q ss_pred CcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCcEEEEEeCCCc
Q 009581 286 NAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGT 365 (531)
Q Consensus 286 ~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~l~kd~~IVVyC~sG~ 365 (531)
+++|||||++.||..||||||+ |+|+.++...+.++ + .+++++||+||++|.
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~l--------------~------~~~~~~ivv~C~~g~ 52 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAI--------NIPLKEVKERIATA--------------V------PDKNDTVKVYCNAGR 52 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCE--------ECCHHHHHHHHHHH--------------C------CCTTSEEEEEESSSH
T ss_pred CCEEEECCCHHHHHhCCCCCCE--------EcCHHHHHHHHHHh--------------C------CCCCCcEEEEcCCCc
Confidence 4689999999999999999999 99987665443322 1 147899999999999
Q ss_pred HHHHHHHHHHHccCCceEEecchHHHHHHcCCceec
Q 009581 366 RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (531)
Q Consensus 366 RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~ 401 (531)
||..+++.|+.+||++|+++ |||.+| +.|+.+
T Consensus 53 rs~~aa~~L~~~G~~~v~~l-GG~~~w---~~~~~~ 84 (85)
T 2jtq_A 53 QSGQAKEILSEMGYTHVENA-GGLKDI---AMPKVK 84 (85)
T ss_dssp HHHHHHHHHHHTTCSSEEEE-EETTTC---CSCEEE
T ss_pred hHHHHHHHHHHcCCCCEEec-cCHHHH---hccccc
Confidence 99999999999999999999 999999 445543
No 39
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.75 E-value=7.3e-19 Score=174.77 Aligned_cols=120 Identities=17% Similarity=0.187 Sum_probs=99.4
Q ss_pred ccCHHHHHHHHhCCCCcEEEEeC-ChhhhhhcCCccccccccccccccCccc-ccchhhhhhcCchhhHHHHHHHHHhhh
Q 009581 271 DLSPKSTLELLRGKENAVLIDVR-HEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNL 348 (531)
Q Consensus 271 ~ISp~El~elL~~~~~avLIDVR-s~eEf~~GHIPGAi~a~~~~~~nIPl~e-L~~~~~~Llk~p~eL~~~L~algI~~L 348 (531)
.|+++++.+++. +++.+||||| ++.||..||||||+ |+|+.. +.......+++++.+.+.+..+|+
T Consensus 9 ~is~~~l~~~l~-~~~~~liDvR~~~~e~~~ghIpgA~--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi--- 76 (285)
T 1uar_A 9 LVSTDWVQEHLE-DPKVRVLEVDEDILLYDTGHIPGAQ--------KIDWQRDFWDPVVRDFISEEEFAKLMERLGI--- 76 (285)
T ss_dssp EECHHHHHTTTT-CTTEEEEEECSSTTHHHHCBCTTCE--------EECHHHHHBCSSSSSBCCHHHHHHHHHHTTC---
T ss_pred eEcHHHHHHhcC-CCCEEEEEcCCCcchhhcCcCCCCE--------ECCchhhccCCcccCCCCHHHHHHHHHHcCC---
Confidence 589999998884 4578999999 78999999999999 898763 322223345566677777766665
Q ss_pred cccCCCcEEEEEeCCCc-HHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccc
Q 009581 349 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSE 405 (531)
Q Consensus 349 k~l~kd~~IVVyC~sG~-RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~ 405 (531)
+++++|||||++|. +|..+++.|+.+||++|++|+||+.+|..+|+|+....+.
T Consensus 77 ---~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~ 131 (285)
T 1uar_A 77 ---SNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVPS 131 (285)
T ss_dssp ---CTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCCC
T ss_pred ---CCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCCCc
Confidence 48999999999988 7999999999999999999999999999999999886554
No 40
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.71 E-value=5.8e-18 Score=153.90 Aligned_cols=125 Identities=18% Similarity=0.192 Sum_probs=86.4
Q ss_pred CccCHHHHHHHHhC-CCCcEEEEeCChhhhhhcCCccccccccccccccCccccc-chhhhhhcCchhhHHHHHHHHHhh
Q 009581 270 GDLSPKSTLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG-GSVKKLLRGGRELDDTLTAAVIRN 347 (531)
Q Consensus 270 ~~ISp~El~elL~~-~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~-~~~~~Llk~p~eL~~~L~algI~~ 347 (531)
..|+++++.+++++ .++.+|||||++.||..||||||+ |||+.++. .+... ..-.+..++.......
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAi--------nip~~~l~~~~~~~---~~~~~~~ll~~~~~~~ 72 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAI--------NINCSKLMKRRLQQ---DKVLITELIQHSAKHK 72 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCE--------ECCCCHHHHHHHHT---TSSCHHHHHHHSCSSC
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCe--------eeChHHHHHhhhhc---CCcCHHHhcCchhhhh
Confidence 57999999999853 457899999999999999999999 99987662 22110 0000111110000000
Q ss_pred hcccCCCcEEEEEeCCCcHHHHH------HHHHHHc--cCCceEEecchHHHHHHcCCceeccccch
Q 009581 348 LKIVQDRSKVIVMDADGTRSKGI------ARSLRKL--GVMRAFLVQGGFQSWVKEGLRIKELKSET 406 (531)
Q Consensus 348 Lk~l~kd~~IVVyC~sG~RS~~A------A~~L~~l--Gf~nV~~L~GG~~aW~~aGLPV~~~~p~~ 406 (531)
..++++++|||||++|.|+..+ ++.|+.+ ||++|++|+|||.+|.+.+.++....+.+
T Consensus 73 -~~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~~~~~ 138 (153)
T 2vsw_A 73 -VDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEGKSTL 138 (153)
T ss_dssp -CCCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC----
T ss_pred -hccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcCCCCc
Confidence 0135789999999999988665 5778744 99999999999999999877777765444
No 41
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.71 E-value=1.5e-17 Score=147.46 Aligned_cols=120 Identities=17% Similarity=0.225 Sum_probs=80.5
Q ss_pred ccCHHHHHH--------HHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHH
Q 009581 271 DLSPKSTLE--------LLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTA 342 (531)
Q Consensus 271 ~ISp~El~e--------lL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~a 342 (531)
.|+++++.+ ++. +++.+|||||++.||..||||||+ |+|+.++..... +......+...+..
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~-~~~~~iiDvR~~~e~~~ghIpgA~--------~ip~~~~~~~~~-~~~~~~~~~~~~~~ 71 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLP-SQGPVIIDCRPFMEYNKSHIQGAV--------HINCADKISRRR-LQQGKITVLDLISC 71 (142)
T ss_dssp EECHHHHHHHHHC-----------CEEEECSCHHHHHHEEETTCE--------ECCCSSHHHHHH-HHTTSSCHHHHHHT
T ss_pred ccCHHHHHHHHHhcccccCC-CCCCEEEEeCCHHHhhhhhccCcc--------ccCccHHHHHHH-hhcCCcchhhhCCC
Confidence 478999988 442 357899999999999999999999 999876532111 10011111111110
Q ss_pred HHH-hhhcccCCCcEEEEEeCCCcHH---------HHHHHHHHHccCCceEEecchHHHHHHcCCceecc
Q 009581 343 AVI-RNLKIVQDRSKVIVMDADGTRS---------KGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (531)
Q Consensus 343 lgI-~~Lk~l~kd~~IVVyC~sG~RS---------~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~ 402 (531)
.+. ..++.. ++++||+||++|.++ ..++..|...|| +|++|+|||.+|.++|+|+...
T Consensus 72 ~~~~~~~~~~-~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~ 139 (142)
T 2ouc_A 72 REGKDSFKRI-FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDN 139 (142)
T ss_dssp TSCTTHHHHH-HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEE
T ss_pred hhhhHHHhcc-CCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhcc
Confidence 000 000000 268999999999874 567888999999 9999999999999999998875
No 42
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.70 E-value=1.3e-17 Score=153.09 Aligned_cols=108 Identities=19% Similarity=0.217 Sum_probs=86.3
Q ss_pred CccCHHHHHHHHhCC-----CCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHH
Q 009581 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAV 344 (531)
Q Consensus 270 ~~ISp~El~elL~~~-----~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~alg 344 (531)
..|+++++.+++.++ ++.+|||||++.||..||||||+ |||+.++......... .
T Consensus 23 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi--------nip~~~~~~~~~~~~~---~--------- 82 (161)
T 1c25_A 23 KYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAV--------NLHMEEEVEDFLLKKP---I--------- 82 (161)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHTTTSC---C---------
T ss_pred ceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcE--------eCChhHHHHHHHhhhh---h---------
Confidence 469999999998543 47899999999999999999999 9998765432110000 0
Q ss_pred HhhhcccCCCcEE--EEEeC-CCcHHHHHHHHHHHc----------cCCceEEecchHHHHHHcCCceecc
Q 009581 345 IRNLKIVQDRSKV--IVMDA-DGTRSKGIARSLRKL----------GVMRAFLVQGGFQSWVKEGLRIKEL 402 (531)
Q Consensus 345 I~~Lk~l~kd~~I--VVyC~-sG~RS~~AA~~L~~l----------Gf~nV~~L~GG~~aW~~aGLPV~~~ 402 (531)
..++++++ |+||+ +|.||..+++.|+.. ||++|++|+|||.+|.+++.|+...
T Consensus 83 -----~~~~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~ 148 (161)
T 1c25_A 83 -----VPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEP 148 (161)
T ss_dssp -----CCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEES
T ss_pred -----ccCCCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCC
Confidence 01367886 67899 999999999999864 9999999999999999999998874
No 43
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.70 E-value=6.8e-18 Score=176.28 Aligned_cols=117 Identities=20% Similarity=0.237 Sum_probs=98.6
Q ss_pred CccCHHHHHHHHhCCCCcEEEEeCC--------hhhhhhcCCccccccccccccccCccc-ccch-----hhhhhcCchh
Q 009581 270 GDLSPKSTLELLRGKENAVLIDVRH--------EDLRERDGIPDLRRGARFRYASVYLPE-VGGS-----VKKLLRGGRE 335 (531)
Q Consensus 270 ~~ISp~El~elL~~~~~avLIDVRs--------~eEf~~GHIPGAi~a~~~~~~nIPl~e-L~~~-----~~~Llk~p~e 335 (531)
..|+++++.+++. + .+|||||+ +.||..||||||+ |+|+.+ +... ....+++++.
T Consensus 14 ~~Is~~el~~~l~--~-~~iIDvR~~~~~~~~~~~ey~~gHIpGAi--------~ip~~~~l~~~~~~~~~~~~lp~~~~ 82 (373)
T 1okg_A 14 VFLDPSEVADHLA--E-YRIVDCRYSLKIKDHGSIQYAKEHVKSAI--------RADVDTNLSKLVPTSTARHPLPPXAE 82 (373)
T ss_dssp CEECHHHHTTCGG--G-SEEEECCCCSSSTTTTTTHHHHCEETTCE--------ECCTTTTSCCCCTTCCCSSCCCCHHH
T ss_pred cEEcHHHHHHHcC--C-cEEEEecCCccccccchhHHhhCcCCCCE--------EeCchhhhhcccccCCccccCCCHHH
Confidence 4689999988874 2 89999998 6999999999999 899875 6442 2345666777
Q ss_pred hHHHHHHHHHhhhcccCCCcEEEEEe-CCCcHHH-HHHHHHHHccCCceEEecchHHHHHHcCCceecccc
Q 009581 336 LDDTLTAAVIRNLKIVQDRSKVIVMD-ADGTRSK-GIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (531)
Q Consensus 336 L~~~L~algI~~Lk~l~kd~~IVVyC-~sG~RS~-~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p 404 (531)
+++.+..+++. ++++||||| ++|.||. +++|.|+.+|| +|++|+||+.+|+++|+|++...+
T Consensus 83 f~~~l~~~gi~------~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~~ 146 (373)
T 1okg_A 83 FIDWCMANGMA------GELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEP 146 (373)
T ss_dssp HHHHHHHTTCS------SSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCC
T ss_pred HHHHHHHcCCC------CCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCCC
Confidence 88878777764 899999999 7888886 99999999999 999999999999999999988644
No 44
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.70 E-value=3e-17 Score=178.35 Aligned_cols=109 Identities=17% Similarity=0.186 Sum_probs=95.0
Q ss_pred CccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 009581 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (531)
Q Consensus 270 ~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk 349 (531)
..|+++++.+++.+.++.+|||||++.||..||||||+ |||+.+|...+..+.+
T Consensus 7 ~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv--------~ip~~~~~~~~~~l~~------------------ 60 (539)
T 1yt8_A 7 AVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAA--------NLPLSRLELEIHARVP------------------ 60 (539)
T ss_dssp EEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCE--------ECCGGGHHHHHHHHSC------------------
T ss_pred cccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHHhhCC------------------
Confidence 46999999999865557999999999999999999999 9998777655544322
Q ss_pred ccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccch
Q 009581 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSET 406 (531)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~~ 406 (531)
+++++|||||++|.+|..+++.|+.+||++|++|+||+.+|+++|+|++.+.+.+
T Consensus 61 --~~~~~iVvyc~~g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~ 115 (539)
T 1yt8_A 61 --RRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDVNVP 115 (539)
T ss_dssp --CTTSCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSSSHH
T ss_pred --CCCCeEEEEECCCChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCCcCc
Confidence 3689999999999999999999999999999999999999999999998875543
No 45
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.70 E-value=2.2e-17 Score=179.46 Aligned_cols=197 Identities=13% Similarity=0.133 Sum_probs=133.9
Q ss_pred cceehhhhhhhhcc--cceeccCCceeeEccCCcccCCCchhHhhhhhh------hcccceeeecccchHHHHHHHHHHH
Q 009581 160 VAAVDVLRNTIVAL--EESMTNGASFVVYYYGTTKESLPPEIRDALNLY------EDRAVKLWRPVGSALQQVSVAIEGL 231 (531)
Q Consensus 160 ~~~~d~l~~~~~~~--e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~------e~~tg~ilg~~G~~aq~v~~~~egv 231 (531)
-++.++|++.+..- ...+++.++...|--|+.+..+.....++.... ..+.--+++..|..+..+.. .
T Consensus 266 ~is~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~~~~~~~~ivv~c~~g~rs~~aa~----~ 341 (539)
T 1yt8_A 266 RLDLAGLAQWQDEHDRTTYLLDVRTPEEYEAGHLPGSRSTPGGQLVQETDHVASVRGARLVLVDDDGVRANMSAS----W 341 (539)
T ss_dssp EECHHHHHHHHHCTTSCEEEEECSCHHHHHHCBCTTCEECCHHHHHHSHHHHCCSBTCEEEEECSSSSHHHHHHH----H
T ss_pred eECHHHHHHHHhCCCCCeEEEECCCHHHHhcCCCCCCEeCCHHHHHHHHHhhcCCCCCeEEEEeCCCCcHHHHHH----H
Confidence 46777787766432 457888888887877777764432233332211 11122233444444443332 2
Q ss_pred hHhcCcCCCCCeeehhhhHh-HHHHHHHHHHHHHhCCC----------CCccCHHHHHHHHhCCCCcEEEEeCChhhhhh
Q 009581 232 ERSLGFDPNDPIVPFVVFLG-TSATLWIFYWWWTYGGY----------SGDLSPKSTLELLRGKENAVLIDVRHEDLRER 300 (531)
Q Consensus 232 ~k~lgv~~~dpVv~~~~~~G-~~~~l~~~~~~~~~~g~----------~~~ISp~El~elL~~~~~avLIDVRs~eEf~~ 300 (531)
.+.+|+ +..++ -| .. ..|...++ ...++++++.+++. .++.+|||||++.||+.
T Consensus 342 L~~~G~---~v~~l----~G~G~-------~~w~~~g~p~~~~~~~~~~~~i~~~~l~~~l~-~~~~~liDvR~~~e~~~ 406 (539)
T 1yt8_A 342 LAQMGW---QVAVL----DGLSE-------ADFSERGAWSAPLPRQPRADTIDPTTLADWLG-EPGTRVLDFTASANYAK 406 (539)
T ss_dssp HHHTTC---EEEEE----CSCCG-------GGCCBCSSCCCCCCCCCCCCEECHHHHHHHTT-STTEEEEECSCHHHHHH
T ss_pred HHHcCC---eEEEe----cCCCh-------HHHHHhhccccCCCCCCcCCccCHHHHHHHhc-CCCeEEEEeCCHHHhhc
Confidence 334676 22222 22 21 11122222 24689999999884 46789999999999999
Q ss_pred cCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCC
Q 009581 301 DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVM 380 (531)
Q Consensus 301 GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~ 380 (531)
||||||+ ++|..+|...+.. ++++++||+||++|.||..+++.|+.+||+
T Consensus 407 ghIpgA~--------~ip~~~l~~~l~~----------------------l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~ 456 (539)
T 1yt8_A 407 RHIPGAA--------WVLRSQLKQALER----------------------LGTAERYVLTCGSSLLARFAVAEVQALSGK 456 (539)
T ss_dssp CBCTTCE--------ECCGGGHHHHHHH----------------------HCCCSEEEEECSSSHHHHHHHHHHHHHHCS
T ss_pred CcCCCch--------hCCHHHHHHHHHh----------------------CCCCCeEEEEeCCChHHHHHHHHHHHcCCC
Confidence 9999999 9988766544332 257899999999999999999999999999
Q ss_pred ceEEecchHHHHHHcCCceeccccc
Q 009581 381 RAFLVQGGFQSWVKEGLRIKELKSE 405 (531)
Q Consensus 381 nV~~L~GG~~aW~~aGLPV~~~~p~ 405 (531)
+|++|+|||.+|.++|+|++++.+.
T Consensus 457 ~v~~l~GG~~~W~~~g~pv~~~~~~ 481 (539)
T 1yt8_A 457 PVFLLDGGTSAWVAAGLPTEDGESL 481 (539)
T ss_dssp CEEEETTHHHHHHHTTCCCBCSSCC
T ss_pred CEEEeCCcHHHHHhCCCCcccCCCC
Confidence 9999999999999999999986443
No 46
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.68 E-value=5.9e-17 Score=148.41 Aligned_cols=107 Identities=20% Similarity=0.234 Sum_probs=82.4
Q ss_pred CccCHHHHHHHHhCC---CCcEEEEeCChhhhhhcCCccccccccccccccCcccccc-hhhhhhcCchhhHHHHHHHHH
Q 009581 270 GDLSPKSTLELLRGK---ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG-SVKKLLRGGRELDDTLTAAVI 345 (531)
Q Consensus 270 ~~ISp~El~elL~~~---~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~-~~~~Llk~p~eL~~~L~algI 345 (531)
..|+++++.+++.+. ++.+|||||++ ||..||||||+ |||+.++.. .+.. +...+.
T Consensus 5 ~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAi--------nip~~~l~~~~~~~-------l~~~l~---- 64 (152)
T 2j6p_A 5 TYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSI--------NMPTISCTEEMYEK-------LAKTLF---- 64 (152)
T ss_dssp EEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCE--------ECCTTTCCHHHHHH-------HHHHHH----
T ss_pred CccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcE--------ECChhHhhHHHHHH-------HHHHhc----
Confidence 468999999998642 37899999999 99999999999 999877653 2111 111111
Q ss_pred hhhcccCCCcEEEEEe-CCCcHHHHHH----HHHHHccC--CceEEecchHHHHHHcCCceec
Q 009581 346 RNLKIVQDRSKVIVMD-ADGTRSKGIA----RSLRKLGV--MRAFLVQGGFQSWVKEGLRIKE 401 (531)
Q Consensus 346 ~~Lk~l~kd~~IVVyC-~sG~RS~~AA----~~L~~lGf--~nV~~L~GG~~aW~~aGLPV~~ 401 (531)
. ...+.||+|| .+|.||..++ +.|+.+|| ++|++|+|||.+|.++|.++..
T Consensus 65 ~-----~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~ 122 (152)
T 2j6p_A 65 E-----EKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP 122 (152)
T ss_dssp H-----TTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred c-----cCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence 0 1234677789 7999998888 77888997 5899999999999999988765
No 47
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.68 E-value=4.5e-17 Score=151.61 Aligned_cols=109 Identities=20% Similarity=0.293 Sum_probs=83.4
Q ss_pred CccCHHHHHHHHhCC-----CCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHH
Q 009581 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAV 344 (531)
Q Consensus 270 ~~ISp~El~elL~~~-----~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~alg 344 (531)
..|+++++.+++.+. ++.+|||||++.||..||||||+ |||+.++...... .. .
T Consensus 24 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~--~~-~---------- 82 (175)
T 2a2k_A 24 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAV--------NLPLERDAESFLL--KS-P---------- 82 (175)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHHH--SS-C----------
T ss_pred ceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcE--------ECChhHHHHHhhh--hh-h----------
Confidence 479999999998543 47899999999999999999999 9998765432100 00 0
Q ss_pred HhhhcccCCCcEEEE--EeC-CCcHHHHHHHHHHH----------ccCCceEEecchHHHHHHcCCceecc
Q 009581 345 IRNLKIVQDRSKVIV--MDA-DGTRSKGIARSLRK----------LGVMRAFLVQGGFQSWVKEGLRIKEL 402 (531)
Q Consensus 345 I~~Lk~l~kd~~IVV--yC~-sG~RS~~AA~~L~~----------lGf~nV~~L~GG~~aW~~aGLPV~~~ 402 (531)
+-...++++||| ||+ +|.||..+++.|+. +||++|++|+|||.+|.++|.|+...
T Consensus 83 ---~~~~~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~ 150 (175)
T 2a2k_A 83 ---IAPCSLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 150 (175)
T ss_dssp ---CCC----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred ---hccccCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCC
Confidence 000126788855 698 99999999999986 49999999999999999999998663
No 48
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.67 E-value=4.3e-17 Score=171.87 Aligned_cols=121 Identities=16% Similarity=0.166 Sum_probs=95.9
Q ss_pred cCHHHHHHHHhCCCCcEEEEeCChhhh-----------hhcCCccccccccccccccCcc-------cccchhhhhhcCc
Q 009581 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLP-------EVGGSVKKLLRGG 333 (531)
Q Consensus 272 ISp~El~elL~~~~~avLIDVRs~eEf-----------~~GHIPGAi~a~~~~~~nIPl~-------eL~~~~~~Llk~p 333 (531)
++++++.+++. .++.+|||||++.|| +.||||||+ |+|+. ++.+.. ..++++
T Consensus 274 i~~~e~~~~l~-~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi--------~ip~~~~~~~~~~~~~~~-~~~~~~ 343 (423)
T 2wlr_A 274 LDMEQARGLLH-RQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGAR--------WGHAGSDSTHMEDFHNPD-GTMRSA 343 (423)
T ss_dssp ECHHHHHTTTT-CSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCE--------ECCCCSSTTCCGGGBCTT-SSBCCH
T ss_pred ecHHHHHHHhc-CCCceEEecCchhheeeeccCCCCCCcCCCCCCcc--------ccccccccccHHHHcCCC-CcCCCH
Confidence 67888888774 467899999999999 889999999 77654 332221 224455
Q ss_pred hhhHHHHHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHH-cCCceeccccchhh
Q 009581 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKELKSETAL 408 (531)
Q Consensus 334 ~eL~~~L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~-aGLPV~~~~p~~a~ 408 (531)
+++.+.+.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.+ .|+|++++.+.+..
T Consensus 344 ~~l~~~~~~~~~------~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~~~~~ 413 (423)
T 2wlr_A 344 DDITAMWKAWNI------KPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGPDS 413 (423)
T ss_dssp HHHHHHHHTTTC------CTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECSSCCC--
T ss_pred HHHHHHHHHcCC------CCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccCCCCCCh
Confidence 566665544443 5899999999999999999999999999999999999999998 99999998666543
No 49
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.67 E-value=7.3e-17 Score=155.63 Aligned_cols=106 Identities=23% Similarity=0.304 Sum_probs=86.5
Q ss_pred CccCHHHHHHHHhCC-----CCcEEEEeCChhhhhhcCCccccccccccccccCcccccch-hhhhhcCchhhHHHHHHH
Q 009581 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-VKKLLRGGRELDDTLTAA 343 (531)
Q Consensus 270 ~~ISp~El~elL~~~-----~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~-~~~Llk~p~eL~~~L~al 343 (531)
..|+++++.+++.+. ++.+|||||++.||..||||||+ |||+.++... +..
T Consensus 44 ~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAi--------nip~~~l~~~~~~~--------------- 100 (211)
T 1qb0_A 44 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAV--------NLPLERDAESFLLK--------------- 100 (211)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHHHT---------------
T ss_pred CeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCE--------ECCchHHHHHhhhh---------------
Confidence 579999999998542 36899999999999999999999 9998765432 110
Q ss_pred HHhhhccc--CCCcEE--EEEeC-CCcHHHHHHHHHHH----------ccCCceEEecchHHHHHHcCCceecc
Q 009581 344 VIRNLKIV--QDRSKV--IVMDA-DGTRSKGIARSLRK----------LGVMRAFLVQGGFQSWVKEGLRIKEL 402 (531)
Q Consensus 344 gI~~Lk~l--~kd~~I--VVyC~-sG~RS~~AA~~L~~----------lGf~nV~~L~GG~~aW~~aGLPV~~~ 402 (531)
+..+ .++++| |+||+ +|.||..+++.|+. +||++|++|+|||.+|.++|.|+...
T Consensus 101 ----~~~l~~~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~ 170 (211)
T 1qb0_A 101 ----SPIAPCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 170 (211)
T ss_dssp ----TTCCCSSTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred ----hhhccccCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCC
Confidence 0011 267887 78899 99999999999986 69999999999999999999998763
No 50
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.66 E-value=1.6e-16 Score=153.83 Aligned_cols=90 Identities=28% Similarity=0.330 Sum_probs=76.4
Q ss_pred CcEEEEeCChhhhhh----------cCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCc
Q 009581 286 NAVLIDVRHEDLRER----------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRS 355 (531)
Q Consensus 286 ~avLIDVRs~eEf~~----------GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~l~kd~ 355 (531)
+.+|||||++.||.. ||||||+ |+|+.++.... +.+...++ ++++
T Consensus 131 ~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-----------e~~~~~~~------~~~~ 185 (230)
T 2eg4_A 131 HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSK--------NAPLELFLSPE-----------GLLERLGL------QPGQ 185 (230)
T ss_dssp CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCE--------ECCGGGGGCCT-----------THHHHHTC------CTTC
T ss_pred CCeEEeCCCHHHcCcccCCCCCccCCCCCCcE--------EcCHHHhCChH-----------HHHHhcCC------CCCC
Confidence 578999999999999 9999999 99987765421 02222232 5899
Q ss_pred EEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceec
Q 009581 356 KVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (531)
Q Consensus 356 ~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~ 401 (531)
+||+||++|.||..++..|+.+| ++|++|+|||.+|.+.|+|+++
T Consensus 186 ~iv~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~ 230 (230)
T 2eg4_A 186 EVGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP 230 (230)
T ss_dssp EEEEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred CEEEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence 99999999999999999999999 8999999999999999999863
No 51
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.65 E-value=2.1e-16 Score=158.53 Aligned_cols=102 Identities=15% Similarity=0.248 Sum_probs=85.3
Q ss_pred CccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 009581 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (531)
Q Consensus 270 ~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk 349 (531)
..|+++++.+++. +++.+|||||++.||+.||||||+ |+|+.++......+ .. .+
T Consensus 122 ~~Is~~el~~ll~-~~~~vlIDVR~~~Ey~~GHIpGAi--------niP~~~~~~~~~~l-------~~---~l------ 176 (265)
T 4f67_A 122 TYLSPEEWHQFIQ-DPNVILLDTRNDYEYELGTFKNAI--------NPDIENFREFPDYV-------QR---NL------ 176 (265)
T ss_dssp CEECHHHHHHHTT-CTTSEEEECSCHHHHHHEEETTCB--------CCCCSSGGGHHHHH-------HH---HT------
T ss_pred ceECHHHHHHHhc-CCCeEEEEeCCchHhhcCcCCCCE--------eCCHHHHHhhHHHH-------HH---hh------
Confidence 4799999999984 468999999999999999999999 99988775432211 00 00
Q ss_pred ccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcC
Q 009581 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (531)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aG 396 (531)
..+++++||+||++|.||..+++.|+.+||++|++|+|||.+|.+..
T Consensus 177 ~~~kdk~IVvyC~~G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~ 223 (265)
T 4f67_A 177 IDKKDKKIAMFCTGGIRCEKTTAYMKELGFEHVYQLHDGILNYLESI 223 (265)
T ss_dssp GGGTTSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred hhCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhc
Confidence 11478999999999999999999999999999999999999999863
No 52
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.64 E-value=7.2e-16 Score=158.85 Aligned_cols=160 Identities=18% Similarity=0.179 Sum_probs=112.2
Q ss_pred HHHHhHhcCcCCCCCeeehhhhHhHHHHHHHHHHHHHh-----------------CCCC--------------------C
Q 009581 228 IEGLERSLGFDPNDPIVPFVVFLGTSATLWIFYWWWTY-----------------GGYS--------------------G 270 (531)
Q Consensus 228 ~egv~k~lgv~~~dpVv~~~~~~G~~~~l~~~~~~~~~-----------------~g~~--------------------~ 270 (531)
++.....+||+.+++||+|...-++.+.. +||.+++ .|+. .
T Consensus 101 f~~~l~~lGI~~d~~VVvYD~~~~~~AaR--~wW~Lr~~Gh~~V~vLdGg~aW~~~g~p~~~~~~~~~~p~p~~~~~~~~ 178 (327)
T 3utn_X 101 FDDAMSNLGVQKDDILVVYDRVGNFSSPR--CAWTLGVMGHPKVYLLNNFNQYREFKYPLDSSKVAAFSPYPKSHYESSE 178 (327)
T ss_dssp HHHHHHHTTCCTTCEEEEECSSSSSSHHH--HHHHHHHTTCSEEEEESCHHHHHHTTCCCBCCCCSCSCSSCCCCCCCSC
T ss_pred HHHHHHHcCCCCCCEEEEEeCCCCcHHHH--HHHHHHHcCCCceeecccHHHHHHhCCCcccCCccCcCCcCCccccccc
Confidence 66777889999999999976544433222 2333332 1210 0
Q ss_pred ------ccCHHHHHHHHhCC---CCcEEEEeCChhhhh-----------hcCCccccccccccccccCcccccchhhhhh
Q 009581 271 ------DLSPKSTLELLRGK---ENAVLIDVRHEDLRE-----------RDGIPDLRRGARFRYASVYLPEVGGSVKKLL 330 (531)
Q Consensus 271 ------~ISp~El~elL~~~---~~avLIDVRs~eEf~-----------~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Ll 330 (531)
.++.+++.+.+.+. ++.+|||+|++++|. .||||||+ |+|+.++.+.-+..+
T Consensus 179 ~~~~~~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~--------nlP~~~~ld~~~~~~ 250 (327)
T 3utn_X 179 SFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQ--------PLPYGSLLDPETKTY 250 (327)
T ss_dssp CCHHHHEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEE--------ECCGGGGSCTTTCCC
T ss_pred ccCchheecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCc--------ccChhhccCCCCCCC
Confidence 14556777777543 246899999999995 58999999 999887765444444
Q ss_pred cC-chhhHHHHHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCC
Q 009581 331 RG-GRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGL 397 (531)
Q Consensus 331 k~-p~eL~~~L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGL 397 (531)
+. .+.+...+.++.......++++++||+||.+|.+|+..+..|+.+||++|++|+|+|.+|.....
T Consensus 251 ~~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~ 318 (327)
T 3utn_X 251 PEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSG 318 (327)
T ss_dssp CCTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccC
Confidence 43 33444445443222223456899999999999999999999999999999999999999987543
No 53
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.63 E-value=3e-16 Score=146.90 Aligned_cols=116 Identities=19% Similarity=0.160 Sum_probs=84.4
Q ss_pred CccCHHHHHHHHhCCC------CcEEEEeCChhhhhhcCCccccccccccccccCcccccchhhhhhcCchhhHHHHHHH
Q 009581 270 GDLSPKSTLELLRGKE------NAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAA 343 (531)
Q Consensus 270 ~~ISp~El~elL~~~~------~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~al 343 (531)
..|+++++.+++.+.+ +.+|||||+ .||..||||||+ |||+.++......+ .++...+...
T Consensus 31 ~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAi--------niP~~~l~~~~~~l----~~l~~~~~~~ 97 (169)
T 3f4a_A 31 KYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGW--------HYAYSRLKQDPEYL----RELKHRLLEK 97 (169)
T ss_dssp EEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCE--------ECCHHHHHHCHHHH----HHHHHHHHHH
T ss_pred cEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCE--------ECCHHHhhcccccH----HHHHHHHHhh
Confidence 4799999999986432 589999999 999999999999 99988775541100 1122222222
Q ss_pred HHhhhcccCCCcEEEEEeCCC-cHHHHHHHHHHH----cc--CCceEEecchHHHHHHcCCceecc
Q 009581 344 VIRNLKIVQDRSKVIVMDADG-TRSKGIARSLRK----LG--VMRAFLVQGGFQSWVKEGLRIKEL 402 (531)
Q Consensus 344 gI~~Lk~l~kd~~IVVyC~sG-~RS~~AA~~L~~----lG--f~nV~~L~GG~~aW~~aGLPV~~~ 402 (531)
++. ...+++||+||.+| .||..++..|.+ .| |.+|++|+|||.+|.+++.|....
T Consensus 98 ~~~----~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~~ 159 (169)
T 3f4a_A 98 QAD----GRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDESV 159 (169)
T ss_dssp HHT----SSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTTT
T ss_pred ccc----ccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCcccc
Confidence 221 01247999999987 799888876644 36 578999999999999998876553
No 54
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.62 E-value=1.5e-16 Score=144.32 Aligned_cols=108 Identities=27% Similarity=0.372 Sum_probs=79.0
Q ss_pred CccCHHHHHHHHhCC-CCcEEEEeCChhhhhhcCCccccccccccccccCccccc------c--hhhhhhcCchhhHHHH
Q 009581 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG------G--SVKKLLRGGRELDDTL 340 (531)
Q Consensus 270 ~~ISp~El~elL~~~-~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~------~--~~~~Llk~p~eL~~~L 340 (531)
..|+++++.+++.+. ++.+|||||++.||..||||||+ |+|+.++. + .+..+++++.. .+.+
T Consensus 16 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAi--------nip~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 86 (154)
T 1hzm_A 16 ISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAI--------NVAIPGIMLRRLQKGNLPVRALFTRGED-RDRF 86 (154)
T ss_dssp SBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCC--------CCCCSSHHHHTBCCSCCCTTTTSTTSHH-HHHH
T ss_pred cccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCce--------EeCccHHHHhhhhcCcccHHHhCCCHHH-HHHH
Confidence 468899998888532 37899999999999999999999 99976542 1 12223332211 1222
Q ss_pred HHHHHhhhcccCCCcEEEEEeCCCcHH-------HHHHHHHHHc---cCCceEEecchHHHHHHc
Q 009581 341 TAAVIRNLKIVQDRSKVIVMDADGTRS-------KGIARSLRKL---GVMRAFLVQGGFQSWVKE 395 (531)
Q Consensus 341 ~algI~~Lk~l~kd~~IVVyC~sG~RS-------~~AA~~L~~l---Gf~nV~~L~GG~~aW~~a 395 (531)
. .++++++||+||++|.++ ..+++.|+.+ ||+ |++|+|||.+|.+.
T Consensus 87 ~--------~~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 87 T--------RRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp H--------HSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred h--------ccCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 1 234788999999998865 4557778765 998 99999999999875
No 55
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.62 E-value=3.9e-16 Score=152.18 Aligned_cols=107 Identities=20% Similarity=0.265 Sum_probs=80.3
Q ss_pred CccCHHHHHHHHhCC-----CCcEEEEeCChhhhhhcCCccccccccccccccCccc-ccchhhhhhcCchhhHHHHHHH
Q 009581 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAA 343 (531)
Q Consensus 270 ~~ISp~El~elL~~~-----~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~e-L~~~~~~Llk~p~eL~~~L~al 343 (531)
..|+++++.+++.+. ++++|||||++.||..||||||+ |||+.+ +...+.. . ..
T Consensus 57 ~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAi--------nIP~~~~l~~~l~~---~-~~-------- 116 (216)
T 3op3_A 57 KYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGAL--------NLYSQEELFNFFLK---K-PI-------- 116 (216)
T ss_dssp EEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCE--------ECCSHHHHHHHHTS---S-CC--------
T ss_pred CEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCE--------ECChHHHHHHHHhh---c-cc--------
Confidence 479999999999643 26899999999999999999999 999864 2221110 0 00
Q ss_pred HHhhhcccCCCc--EEEEEeC-CCcHHHHHHHHHHHc----------cCCceEEecchHHHHHHcCCceec
Q 009581 344 VIRNLKIVQDRS--KVIVMDA-DGTRSKGIARSLRKL----------GVMRAFLVQGGFQSWVKEGLRIKE 401 (531)
Q Consensus 344 gI~~Lk~l~kd~--~IVVyC~-sG~RS~~AA~~L~~l----------Gf~nV~~L~GG~~aW~~aGLPV~~ 401 (531)
+ ..++++ +||+||+ +|.||..+++.|+.. ||++||+|+|||.+|.+..-.+..
T Consensus 117 ----~-~~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lce 182 (216)
T 3op3_A 117 ----V-PLDTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCE 182 (216)
T ss_dssp ----C-CSSTTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred ----c-ccccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCccccc
Confidence 0 012344 5999999 999999999999887 899999999999999987544444
No 56
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.61 E-value=1.6e-16 Score=165.89 Aligned_cols=104 Identities=17% Similarity=0.167 Sum_probs=84.3
Q ss_pred CCcEEEEeCChhhhh-----------hcCCccccccccccccccCccccc--chhhhhhcCchhhHHHHHHH--HHhhhc
Q 009581 285 ENAVLIDVRHEDLRE-----------RDGIPDLRRGARFRYASVYLPEVG--GSVKKLLRGGRELDDTLTAA--VIRNLK 349 (531)
Q Consensus 285 ~~avLIDVRs~eEf~-----------~GHIPGAi~a~~~~~~nIPl~eL~--~~~~~Llk~p~eL~~~L~al--gI~~Lk 349 (531)
++.+|||||++.||. .||||||+ |||+.++. ...+..+++++++++.|.++ ++
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAi--------niP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi---- 240 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGAR--------NLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGA---- 240 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCE--------ECCGGGGEECCSSSCEECCHHHHHHHHHTTCC------
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCcE--------EecHHHhhccCCCCCccCCHHHHHHHHHhhhcCC----
Confidence 467899999999999 99999999 99988775 32222244566677666554 44
Q ss_pred ccCC---CcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHH-cCCceecc
Q 009581 350 IVQD---RSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKEL 402 (531)
Q Consensus 350 ~l~k---d~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~-aGLPV~~~ 402 (531)
++ +++||+||++|.||..++..|+.+||++|++|+|||.+|.. .++|++++
T Consensus 241 --~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 295 (373)
T 1okg_A 241 --GDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS 295 (373)
T ss_dssp -----CCCTTSEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred --CcccCCCCEEEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccC
Confidence 36 89999999999999999999999999999999999999997 68998765
No 57
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.58 E-value=2.6e-15 Score=138.04 Aligned_cols=107 Identities=17% Similarity=0.243 Sum_probs=78.2
Q ss_pred CccCHHHHHHHHhC-------CCCcEEEEeCChhhhhhcCCccccccccccccccCccccc--chhh-------hhhcCc
Q 009581 270 GDLSPKSTLELLRG-------KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG--GSVK-------KLLRGG 333 (531)
Q Consensus 270 ~~ISp~El~elL~~-------~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~--~~~~-------~Llk~p 333 (531)
..|+++++.+++.. +++.+|||||++.||..||||||+ |+|+.++. .++. .+++..
T Consensus 11 ~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~--------~i~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (158)
T 3tg1_B 11 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAV--------HINCADKISRRRLQQGKITVLDLISCR 82 (158)
T ss_dssp CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCE--------ECCCSSHHHHHHHTTSSCCHHHHTCCC
T ss_pred cEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCce--------eechhHHHHHhhhhcCcccHHhhcCCH
Confidence 47999999999853 457899999999999999999999 99987752 1110 011110
Q ss_pred hhhHHHHHHHHHhhhcccCCCcEEEEEeCCC---------cHHHHHHHHHHHccCCceEEecchHHHHHHc
Q 009581 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDADG---------TRSKGIARSLRKLGVMRAFLVQGGFQSWVKE 395 (531)
Q Consensus 334 ~eL~~~L~algI~~Lk~l~kd~~IVVyC~sG---------~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~a 395 (531)
.. .. .++ ..++++||+||.+| .+|..+++.|+..|| +|++|+|||.+|.+.
T Consensus 83 ~~-~~--------~~~-~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~ 142 (158)
T 3tg1_B 83 EG-KD--------SFK-RIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN 142 (158)
T ss_dssp CS-SC--------SST-TTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred HH-HH--------HHh-ccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence 00 00 000 02478999999999 469999999999999 699999999999764
No 58
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.55 E-value=2.3e-15 Score=145.69 Aligned_cols=101 Identities=25% Similarity=0.244 Sum_probs=77.5
Q ss_pred CCCCcEEEEeCChhhhhhcCCccccccccccccccCcc--cccc-hhhhhhcCchhhHHHHHHHHHhhhcccCCCcEEEE
Q 009581 283 GKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLP--EVGG-SVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIV 359 (531)
Q Consensus 283 ~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~--eL~~-~~~~Llk~p~eL~~~L~algI~~Lk~l~kd~~IVV 359 (531)
+.++.+|||||++.||..||||||+ |+|+. ++.. .....+++++.+.+.+..+ +.+++||+
T Consensus 3 ~~~~~~iiDvR~~~ey~~ghIpgAi--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~ivv 66 (230)
T 2eg4_A 3 LPEDAVLVDTRPRPAYEAGHLPGAR--------HLDLSAPKLRLREEAELKALEGGLTELFQTL--------GLRSPVVL 66 (230)
T ss_dssp CCTTCEEEECSCHHHHHHCBCTTCE--------ECCCCSCCCCCCSHHHHHHHHHHHHHHHHHT--------TCCSSEEE
T ss_pred CCCCEEEEECCChhhHhhCcCCCCE--------ECCccchhcccCCCCCcCCCHHHHHHHHHhc--------CCCCEEEE
Confidence 3467899999999999999999999 88876 4431 1122333334555544433 24789999
Q ss_pred EeCCCc-HHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccc
Q 009581 360 MDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSE 405 (531)
Q Consensus 360 yC~sG~-RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~ 405 (531)
||++|. +|..+++.|+ +||++|++|+|| |.+ +|++...+.
T Consensus 67 yc~~g~~~s~~a~~~L~-~G~~~v~~l~GG---W~~--~p~~~~~~~ 107 (230)
T 2eg4_A 67 YDEGLTSRLCRTAFFLG-LGGLEVQLWTEG---WEP--YATEKEEPK 107 (230)
T ss_dssp ECSSSCHHHHHHHHHHH-HTTCCEEEECSS---CGG--GCCBCSCCC
T ss_pred EcCCCCccHHHHHHHHH-cCCceEEEeCCC---Ccc--CcccCCCCC
Confidence 999998 9999999999 999999999999 977 888765443
No 59
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.54 E-value=7.6e-15 Score=151.23 Aligned_cols=120 Identities=16% Similarity=0.230 Sum_probs=97.9
Q ss_pred CccCHHHHHHHHhCC--CCcEEEEeC--------C-hhhh-hhcCCccccccccccccccCcccc---cchhhhhhcCch
Q 009581 270 GDLSPKSTLELLRGK--ENAVLIDVR--------H-EDLR-ERDGIPDLRRGARFRYASVYLPEV---GGSVKKLLRGGR 334 (531)
Q Consensus 270 ~~ISp~El~elL~~~--~~avLIDVR--------s-~eEf-~~GHIPGAi~a~~~~~~nIPl~eL---~~~~~~Llk~p~ 334 (531)
.-|||+++.+++... ..+++||++ . ..|| +++|||||+ .+.++.+ ......++++++
T Consensus 28 ~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv--------~~Dld~~~d~~~~~ph~LP~~~ 99 (327)
T 3utn_X 28 DLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSI--------FFDIDAISDKKSPYPHMFPTKK 99 (327)
T ss_dssp EEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCE--------ECCTTTSSCTTSSSTTCCCCHH
T ss_pred cccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCe--------eeChHHhcCCCCCCCCCCcCHH
Confidence 369999999998532 347899985 2 4577 679999999 4444333 334567889999
Q ss_pred hhHHHHHHHHHhhhcccCCCcEEEEEeCCCc-HHHHHHHHHHHccCCceEEecchHHHHHHcCCceecccc
Q 009581 335 ELDDTLTAAVIRNLKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (531)
Q Consensus 335 eL~~~L~algI~~Lk~l~kd~~IVVyC~sG~-RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p 404 (531)
.|++.+.++||+ ++++||||++.|. .|.++||+|+.+||++|++|+|| .+|+++|+|++++.+
T Consensus 100 ~f~~~l~~lGI~------~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~~~ 163 (327)
T 3utn_X 100 VFDDAMSNLGVQ------KDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSSKV 163 (327)
T ss_dssp HHHHHHHHTTCC------TTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCCCC
T ss_pred HHHHHHHHcCCC------CCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccCCc
Confidence 999999999996 8999999997765 78899999999999999999977 899999999987643
No 60
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.52 E-value=2.3e-14 Score=131.63 Aligned_cols=117 Identities=16% Similarity=0.246 Sum_probs=79.6
Q ss_pred CCccCHHHHHHHHhCC-CCcEEEEeCChhhhhhcCCccccccccccccccCcccccch-----hhhhhcCchhhHHHHHH
Q 009581 269 SGDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-----VKKLLRGGRELDDTLTA 342 (531)
Q Consensus 269 ~~~ISp~El~elL~~~-~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~-----~~~Llk~p~eL~~~L~a 342 (531)
...|+++++.+++.+. ++.+|||||+++||..||||||+ |||+..+... +...++ ......+..
T Consensus 14 ~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gai--------nip~~~~~~~~~~~~l~~~lp--~~~~~~~~~ 83 (157)
T 1whb_A 14 KGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSL--------SVPEEAISPGVTASWIEAHLP--DDSKDTWKK 83 (157)
T ss_dssp CSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCE--------EECSSSCCTTCCHHHHHHSCC--TTHHHHHHG
T ss_pred CCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCc--------ccCHHHccCCCcHHHHHHHCC--hHHHHHHHh
Confidence 3579999999998532 27899999999999999999999 9998766432 222222 111111211
Q ss_pred HHHhhhcccCCCcEEEEEeCCCcH----HHHHHHHHHH----c----cCC-ceEEecchHHHHHHcCCceecccc
Q 009581 343 AVIRNLKIVQDRSKVIVMDADGTR----SKGIARSLRK----L----GVM-RAFLVQGGFQSWVKEGLRIKELKS 404 (531)
Q Consensus 343 lgI~~Lk~l~kd~~IVVyC~sG~R----S~~AA~~L~~----l----Gf~-nV~~L~GG~~aW~~aGLPV~~~~p 404 (531)
..+.+.||+||..|.+ +..+++.|.+ . ||. +|++|+|||.+|++. +|.....+
T Consensus 84 --------~~~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~~ 149 (157)
T 1whb_A 84 --------RGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTNA 149 (157)
T ss_dssp --------GGTSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSCC
T ss_pred --------cCCCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCCC
Confidence 1234569999987753 3445666652 2 454 499999999999985 88776543
No 61
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.50 E-value=3.1e-14 Score=131.26 Aligned_cols=115 Identities=18% Similarity=0.254 Sum_probs=77.5
Q ss_pred CCccCHHHHHHHHhCC-CCcEEEEeCChhhhhhcCCccccccccccccccCcccccch-----hhhhhcCchhhHHHHHH
Q 009581 269 SGDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-----VKKLLRGGRELDDTLTA 342 (531)
Q Consensus 269 ~~~ISp~El~elL~~~-~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~-----~~~Llk~p~eL~~~L~a 342 (531)
...|+++++.+++.+. ++.+|||||++.||..||||||+ |||+..+... +...++ ......+.
T Consensus 19 ~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAi--------nip~~~l~~~~~~~~l~~~lp--~~~~~l~~- 87 (157)
T 2gwf_A 19 SGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSL--------SVPEEAISPGVTASWIEAHLP--DDSKDTWK- 87 (157)
T ss_dssp CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCE--------ECCGGGCCTTCCHHHHHHTSC--HHHHHHHH-
T ss_pred CCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCc--------ccCHHHcCCCCcHHHHHHHcC--HHHHHHHH-
Confidence 3479999999998643 27899999999999999999999 9998766432 111121 11111111
Q ss_pred HHHhhhcccCCCcEEEEEeCCCcH----HHHHHHHHH----Hc----cCC-ceEEecchHHHHHHcCCceecc
Q 009581 343 AVIRNLKIVQDRSKVIVMDADGTR----SKGIARSLR----KL----GVM-RAFLVQGGFQSWVKEGLRIKEL 402 (531)
Q Consensus 343 lgI~~Lk~l~kd~~IVVyC~sG~R----S~~AA~~L~----~l----Gf~-nV~~L~GG~~aW~~aGLPV~~~ 402 (531)
...+.+.||+||.+|.+ +..+++.|. +. ||. +|++|+|||.+|++. +|....
T Consensus 88 -------~~~~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~ 152 (157)
T 2gwf_A 88 -------KRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTT 152 (157)
T ss_dssp -------TTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGBS
T ss_pred -------hcCCCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-ChhhcC
Confidence 11234568999987753 234556654 22 454 499999999999984 776553
No 62
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.49 E-value=2.6e-15 Score=160.42 Aligned_cols=123 Identities=13% Similarity=0.045 Sum_probs=15.2
Q ss_pred cCCCCCeeehhhhHhHHHHHHHHHHHHHhCCCCCc--------cCH--HHHHHHHhCCCCcEEEEeCChhhhhhcCCccc
Q 009581 237 FDPNDPIVPFVVFLGTSATLWIFYWWWTYGGYSGD--------LSP--KSTLELLRGKENAVLIDVRHEDLRERDGIPDL 306 (531)
Q Consensus 237 v~~~dpVv~~~~~~G~~~~l~~~~~~~~~~g~~~~--------ISp--~El~elL~~~~~avLIDVRs~eEf~~GHIPGA 306 (531)
+..+.||++|.. -+. ..-+||.+..-||... +.. .-+.+++ ++++.+|||||+++||..||||||
T Consensus 333 ~~~~~~vvly~~-~~~---a~~a~~~L~~~G~~~v~~~l~g~~~~~~~~~~~~~~-~~~~~~liDvR~~~e~~~ghIpgA 407 (466)
T 3r2u_A 333 LNYDQEINLIGD-YHL---VSKATHTLQLIGYDDIAGYQLPQSKIQTRSIHSEDI-TGNESHILDVRNDNEWNNGHLSQA 407 (466)
T ss_dssp CCTTSCEEEESC-HHH---HHHHHHHHHTTTCCCEEEEECCC--------------------------------------
T ss_pred cCCCCeEEEEEC-Cch---HHHHHHHhhhhhcccccccccCcccccHHHHHHHHH-hCCCcEEEEeCCHHHHhcCcCCCC
Confidence 366778887544 121 1124455555555321 000 0033444 345789999999999999999999
Q ss_pred cccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEec
Q 009581 307 RRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQ 386 (531)
Q Consensus 307 i~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~~~L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~ 386 (531)
+ |+|+.++...+.. ++++++||+||++|.||..+++.|+.+||++|++|+
T Consensus 408 ~--------~ip~~~l~~~~~~----------------------l~~~~~iv~~C~~G~rs~~a~~~L~~~G~~~v~~l~ 457 (466)
T 3r2u_A 408 V--------HVPHGKLLETDLP----------------------FNKNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVN 457 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred E--------ECCHHHHHHHHhh----------------------CCCCCeEEEECCCChHHHHHHHHHHHcCCCCEEEec
Confidence 9 9998877654332 257899999999999999999999999999999999
Q ss_pred chHHHHHH
Q 009581 387 GGFQSWVK 394 (531)
Q Consensus 387 GG~~aW~~ 394 (531)
|||.+|++
T Consensus 458 GG~~~W~~ 465 (466)
T 3r2u_A 458 EGYKDIQL 465 (466)
T ss_dssp --------
T ss_pred ChHHHHhh
Confidence 99999975
No 63
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.43 E-value=1.2e-13 Score=147.04 Aligned_cols=122 Identities=14% Similarity=0.153 Sum_probs=93.1
Q ss_pred CCccCHHHHHHHHhCCCCcEEEEeCChhhhhhcCCccccccccccccccCccc-ccchhhhhhcCchhhHHHHHHHHHhh
Q 009581 269 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRN 347 (531)
Q Consensus 269 ~~~ISp~El~elL~~~~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~e-L~~~~~~Llk~p~eL~~~L~algI~~ 347 (531)
...|+++++.+++.+ + +|||+|++.+|..||||||+ |+|+.. |...++++ +
T Consensus 272 ~~~is~~~l~~~l~~--~-~iiD~R~~~~y~~ghIpGA~--------~i~~~~~~~~~~~~l--------------~--- 323 (474)
T 3tp9_A 272 RVDLPPERVRAWREG--G-VVLDVRPADAFAKRHLAGSL--------NIPWNKSFVTWAGWL--------------L--- 323 (474)
T ss_dssp ECCCCGGGHHHHHHT--S-EEEECSCHHHHHHSEETTCE--------ECCSSTTHHHHHHHH--------------C---
T ss_pred CceeCHHHHHHHhCC--C-EEEECCChHHHhccCCCCeE--------EECcchHHHHHHHhc--------------C---
Confidence 347999999999864 4 99999999999999999999 998753 33333322 1
Q ss_pred hcccCCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccchhhhhhhhcHHHHHhhhcCCCc
Q 009581 348 LKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPV 427 (531)
Q Consensus 348 Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~~a~s~l~~~~~el~~~i~p~pv 427 (531)
+++++||+||..|. +.+++|.|+.+||++|+.+.+|+.+|+.+|+|+...+..+ ++++.+.+.....
T Consensus 324 ----~~~~~vvvy~~~~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~~i~--------~~~l~~~~~~~~~ 390 (474)
T 3tp9_A 324 ----PADRPIHLLAADAI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYANVS--------PDEVRGALAQQGL 390 (474)
T ss_dssp ----CSSSCEEEECCTTT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCEEEC--------HHHHHHTTTTTCC
T ss_pred ----CCCCeEEEEECCCc-HHHHHHHHHHcCCcceEEecCcHHHHHhcccccccccccC--------HHHHHHHhcCCCc
Confidence 37899999999887 4559999999999999987779999999999888754332 4455554443345
Q ss_pred eEEc
Q 009581 428 QFLG 431 (531)
Q Consensus 428 ~vlG 431 (531)
+++-
T Consensus 391 ~lvD 394 (474)
T 3tp9_A 391 WLLD 394 (474)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5653
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.91 E-value=8.9e-10 Score=117.65 Aligned_cols=79 Identities=8% Similarity=-0.003 Sum_probs=61.2
Q ss_pred CCcEEEEeCChhhhhhcCCccccccccccccccCccc-ccchhhhhhcCchhhHHHHHHHHHhhhcccCCCcEEEEEeCC
Q 009581 285 ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDAD 363 (531)
Q Consensus 285 ~~avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~e-L~~~~~~Llk~p~eL~~~L~algI~~Lk~l~kd~~IVVyC~s 363 (531)
++.+|||+|++.+|..||||||+ |+|+.. |..+.+++ ++++++||+||.
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv--------~ip~~~~~~~~~~~~---------------------~~~~~~vvly~~- 344 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTI--------NIPYDKNFINQIGWY---------------------LNYDQEINLIGD- 344 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCE--------ECCSSTTHHHHHTTT---------------------CCTTSCEEEESC-
T ss_pred CCeEEEECCCHHHHhhCCCCCcE--------ECCccHHHHHHHHhc---------------------cCCCCeEEEEEC-
Confidence 67899999999999999999999 999753 43333322 147899999999
Q ss_pred CcHHHHHHHHHHHccCCceEE-ecchHHHHH
Q 009581 364 GTRSKGIARSLRKLGVMRAFL-VQGGFQSWV 393 (531)
Q Consensus 364 G~RS~~AA~~L~~lGf~nV~~-L~GG~~aW~ 393 (531)
+.++.+++|.|+.+||++|+. ++|+...|.
T Consensus 345 ~~~a~~a~~~L~~~G~~~v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 345 YHLVSKATHTLQLIGYDDIAGYQLPQSKIQT 375 (466)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEECCC-----
T ss_pred CchHHHHHHHhhhhhcccccccccCcccccH
Confidence 558999999999999999997 667655554
No 65
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.66 E-value=2.8e-09 Score=112.58 Aligned_cols=106 Identities=10% Similarity=0.038 Sum_probs=80.2
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhcccc
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVA 161 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~~ 161 (531)
..||++|||.+. .+.++|. +..|.+|||.+|++++ |....+.+...+.+.+ ...+++||+|+.+++.|+
T Consensus 287 ~~Iya~GD~~~~-~~~~~g~~~~~~~~~~A~~~g~~aa~~i~-g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g~ 364 (472)
T 3iwa_A 287 PDIFAGGDCVTI-PNLVTGKPGFFPLGSMANRQGRVIGTNLA-DGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGY 364 (472)
T ss_dssp TTEEECGGGEEE-EBTTTSSEECCCCTTHHHHHHHHHHHHHT-TCCCCCCCBCCCEEEECSSCEEEEEECCHHHHHHTTC
T ss_pred CCEEEeccceec-ccccCCceeecchHHHHHHHHHHHHHHhc-CCCccCCCCCcceEEEECCceeEEEECCHHHHHHcCC
Confidence 459999999988 7777774 6789999999999999 4677788888877655 568999999999999999
Q ss_pred eehhhhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeee
Q 009581 162 AVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWR 215 (531)
Q Consensus 162 ~~d~l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg 215 (531)
+| +.......+++.|+||.....+ |+ +++.++|+|||
T Consensus 365 ~~----------~~~~~~~~~~~~~~~~~~~~~~-----kl--i~~~~~~~ilG 401 (472)
T 3iwa_A 365 DA----------VNVHVEQFDRAHFYPEKTIMTL-----QL--VVDRPTRRVLG 401 (472)
T ss_dssp CE----------EEEEEEC-----------CEEE-----EE--EEETTTCBEEE
T ss_pred ce----------EEEEEecCCccCccCCCceEEE-----EE--EEECCCCEEEE
Confidence 98 5555566778888889888888 88 88888999999
No 66
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.58 E-value=4.1e-09 Score=111.09 Aligned_cols=110 Identities=14% Similarity=0.080 Sum_probs=89.0
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhcccc
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVA 161 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~~ 161 (531)
..|||+|||... .+.+++. +..|.+|||.+|+|++|+....+.+...+.... ...+++||+|+.+++.++
T Consensus 269 p~IyA~GDva~~-~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~~ 347 (437)
T 4eqs_A 269 PNIYAIGDIATS-HYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDY 347 (437)
T ss_dssp TTEEECGGGEEE-EBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGSCE
T ss_pred CCEEEEEEccCc-ccccCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHHHhCCc
Confidence 469999999998 8887775 778999999999999965556788888888777 568999999999888775
Q ss_pred eehhhhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 162 AVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 162 ~~d~l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
.+ ......++..|++|..+..+ |+ +++.++++||| +|.+|
T Consensus 348 ~~------------~~~~~~~~~~~~~~~~~g~~-----Kl--i~d~~~~~ilG-----a~~~g 387 (437)
T 4eqs_A 348 KM------------VEVTQGAHANYYPGNSPLHL-----RV--YYDTSNRQILR-----AAAVG 387 (437)
T ss_dssp EE------------EEEEEESSCTTSSSCCEEEE-----EE--EEETTTCBEEE-----EEEEE
T ss_pred eE------------EEEecCCchhhcCCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 54 22334556678899888888 88 88899999999 66544
No 67
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.48 E-value=1.2e-08 Score=107.14 Aligned_cols=111 Identities=17% Similarity=0.129 Sum_probs=90.6
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhcccc
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVA 161 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~~ 161 (531)
..|||+|||.+. .+.++|. +..|.+|||.+|++++ |....+++.......+ ...+++||+|+.+++.|+
T Consensus 273 ~~IyA~GD~~~~-~~~~~g~~~~~~l~~~A~~~g~~aa~~i~-g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~ 350 (449)
T 3kd9_A 273 ENVYAAGDVAET-RHVITGRRVWVPLAPAGNKMGYVAGSNIA-GKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGY 350 (449)
T ss_dssp TTEEECSTTBCE-EBTTTCSEECCCCHHHHHHHHHHHHHHHT-TCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC
T ss_pred CCEEEeeeeeee-ccccCCceEEeccHHHHHHHHHHHHHHhc-CCCccCCCcccceEEEEcCcEEEEecCCHHHHHHCCC
Confidence 359999999998 8877774 6789999999999999 5777788877776655 668999999999999999
Q ss_pred eehhhhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 162 AVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 162 ~~d~l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
+| ........+++.|++|.....+ |+ +++.++|+||| +|.+|
T Consensus 351 ~~----------~~~~~~~~~~~~~~~~~~~~~~-----kl--i~~~~~~~ilG-----~~~~g 392 (449)
T 3kd9_A 351 DV----------RTAFIKASTRPHYYPGGREIWL-----KG--VVDNETNRLLG-----VQVVG 392 (449)
T ss_dssp CE----------EEEEEEEESSCTTSTTCCEEEE-----EE--EEETTTCBEEE-----EEEEE
T ss_pred ce----------EEEEEecCCccccCCCCceEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 88 5555555666778888877777 88 88888999999 66554
No 68
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.03 E-value=3.4e-07 Score=96.23 Aligned_cols=104 Identities=8% Similarity=0.030 Sum_probs=77.0
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccCcccccc---ccccccccchhhhhhhcccc
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQTGGSAG---SKLTNFSTDLKEASSKATVA 161 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~---~~~~~~~tgl~e~~~~~~~~ 161 (531)
..|||+|||... .+..++. +..|.+|||.+|++++| ....+.+...... .....+++||+|+.+++.|+
T Consensus 272 ~~IyA~GD~~~~-~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~a~vG~te~~a~~~g~ 349 (452)
T 3oc4_A 272 PNVFAIGDCISV-MNEPVAETFYAPLVNNAVRTGLVVANNLEE-KTHRFIGSLRTMGTKVGDYYLASTGLTETEGLFFPQ 349 (452)
T ss_dssp TTEEECGGGBCE-EEGGGTEEECCCCHHHHHHHHHHHTTSSSS-CCCCCCCCCCCEEEEETTEEEEEEECCSGGGGGSSS
T ss_pred CCEEEEEeeEEe-ccccCCceeecchHHHHHHHHHHHHHHhcC-CCccCCCccccEEEEEcCeeEEEecCCHHHHHHCCC
Confidence 469999999987 6666553 67899999999999995 5666655444433 33678999999999999999
Q ss_pred eehhhhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeee
Q 009581 162 AVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWR 215 (531)
Q Consensus 162 ~~d~l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg 215 (531)
+| +.......++. ++|.....+ |+ +++.++|+|||
T Consensus 350 ~~----------~~~~~~~~~~~--~~~~~~~~~-----kl--i~~~~~~~ilG 384 (452)
T 3oc4_A 350 TL----------ASIIVRQPAPP--LQHGTEILG-----KL--IYDKVTQRVLG 384 (452)
T ss_dssp CE----------EEEEEEEECTT--TTCSCEEEE-----EE--EEETTTCBEEE
T ss_pred ce----------EEEEEecCCcc--CCCCCeEEE-----EE--EEECCCCEEEE
Confidence 88 33333222222 566666666 88 88888999999
No 69
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.88 E-value=1.3e-06 Score=92.74 Aligned_cols=106 Identities=19% Similarity=0.153 Sum_probs=79.9
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhcccc
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVA 161 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~~ 161 (531)
..|||+|||... .+..+|. +..|.+|||.+|++++| ....+.+.......+ ...+++|++|+.+++.|+
T Consensus 311 p~IyA~GD~~~~-~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~ 388 (480)
T 3cgb_A 311 QDVYAAGDCATH-YHVIKEIHDHIPIGTTANKQGRLAGLNMLD-KRRAFKGTLGTGIIKFMNLTLARTGLNEKEAKGLHI 388 (480)
T ss_dssp TTEEECGGGBCE-EBTTTCSEECCCCHHHHHHHHHHHHHHHTT-CCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC
T ss_pred CCEEEeeeEEEe-cCCCCCcceecchHHHHHHHHHHHHHHhcC-CCccCCCccceeEEEECCcEEEEeCCCHHHHHHcCC
Confidence 469999999988 6666654 67899999999999994 555666665554444 568999999999999999
Q ss_pred eehhhhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeee
Q 009581 162 AVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWR 215 (531)
Q Consensus 162 ~~d~l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg 215 (531)
+| +.......++..|+++.....+ |+ +++.++|+|+|
T Consensus 389 ~~----------~~~~~~~~~~~~~~~~~~~~~~-----kl--~~~~~~~~ilG 425 (480)
T 3cgb_A 389 PY----------KTVKVDSTNMAGYYPNAKPLYL-----KL--LYRSDTKQLLG 425 (480)
T ss_dssp CE----------EEEEEEEESSCTTSTTCCEEEE-----EE--EEETTTCBEEE
T ss_pred ce----------EEEEEecCCcccccCCCceEEE-----EE--EEECCCCEEEE
Confidence 88 4433333455666677655555 77 77777999999
No 70
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.80 E-value=2.4e-06 Score=90.66 Aligned_cols=106 Identities=8% Similarity=-0.062 Sum_probs=75.4
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccC-cccccccc-ccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQ-TGGSAGSK-LTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~-~~~~~~~~-~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..|||+|||... . ..+..|.+|||.+|++++| ....++. .+.+.+.- ...+++||+|+.+++.|++|
T Consensus 331 ~~IyA~GD~~~~-~----~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~----- 399 (491)
T 3urh_A 331 AGVYAIGDVVRG-P----MLAHKAEDEGVAVAEIIAG-QAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVAY----- 399 (491)
T ss_dssp TTEEECGGGSSS-C----CCHHHHHHHHHHHHHHHTT-SCCCCCTTCCCEEECSSSCEEEEECCHHHHHHTTCCE-----
T ss_pred CCEEEEEecCCC-c----cchhHHHHHHHHHHHHHcC-CCcccCCCCCCEEEEccCCeEEEeCCHHHHHhCCCCE-----
Confidence 359999999854 1 4478899999999999995 5554543 23333322 67899999999999999998
Q ss_pred hhhcccceec--cCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 169 TIVALEESMT--NGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 169 ~~~~~e~~~~--~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
+.... ...+++.| +|.....+ |+ +++.++|+||| +|.+|
T Consensus 400 -----~~~~~~~~~~~~~~~-~~~~~g~~-----k~--i~~~~~~~ilG-----~~~~g 440 (491)
T 3urh_A 400 -----KIGKFPFTANGRARA-MLQTDGFV-----KI--LADKETDRVLG-----GHIIG 440 (491)
T ss_dssp -----EEEEEEGGGCHHHHH-TTCCCCEE-----EE--EEETTTCBEEE-----EEEES
T ss_pred -----EEEEEecCcchhhhc-CCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 33322 22334444 36666677 88 88888999999 77665
No 71
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.76 E-value=2.8e-06 Score=89.76 Aligned_cols=108 Identities=11% Similarity=0.094 Sum_probs=74.2
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhcc--cccccc-Cccccccc-cccccccchhhhhhhcccceehhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSR--VFSSID-QTGGSAGS-KLTNFSTDLKEASSKATVAAVDVL 166 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g--~~~~~~-~~~~~~~~-~~~~~~tgl~e~~~~~~~~~~d~l 166 (531)
..|||+|||... -..+..|.+|||.+|++++++ ....++ ..+...+. ....+++||+|+.+++.|++|
T Consensus 301 ~~Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~--- 372 (466)
T 3l8k_A 301 PNVFATGDANGL-----APYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKMGIEI--- 372 (466)
T ss_dssp TTEEECGGGTCS-----CCSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCEEECSSSCEEEEECCHHHHHHHTCCE---
T ss_pred CCEEEEEecCCC-----CccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcEEEECCCCeEEecCCHHHHHhCCCCE---
Confidence 359999999875 234778999999999999964 222221 11222222 266899999999999999998
Q ss_pred hhhhhcccceeccCCcee-eEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 167 RNTIVALEESMTNGASFV-VYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 167 ~~~~~~~e~~~~~~~~~~-~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
+.....-.+.. .+++|.....+ |+ +++.++|+||| +|.+|
T Consensus 373 -------~~~~~~~~~~~~~~~~~~~~g~~-----k~--i~~~~~~~ilG-----~~~~g 413 (466)
T 3l8k_A 373 -------VEAEYNMEEDVSAQIYGQKEGVL-----KL--IFERGSMRLIG-----AWMIG 413 (466)
T ss_dssp -------EEEEEEGGGSHHHHHHTCCCCEE-----EE--EEETTTCBEEE-----EEEES
T ss_pred -------EEEEEEcccChhheecCCCeEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 43333222211 24456666677 88 88888999999 77655
No 72
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.75 E-value=2.5e-06 Score=89.99 Aligned_cols=106 Identities=6% Similarity=-0.007 Sum_probs=74.0
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccC-cccccccc-ccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQ-TGGSAGSK-LTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~-~~~~~~~~-~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..||++|||... . ..+..|++|||.+|++++| ....++. .+.+.+.- ...+++||+|+.+++.|++|
T Consensus 311 ~~Iya~GD~~~~-~----~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~~~~a~vGlte~~a~~~g~~~----- 379 (476)
T 3lad_A 311 PGVYAIGDVVRG-A----MLAHKASEEGVVVAERIAG-HKAQMNYDLIPAVIYTHPEIAGVGKTEQALKAEGVAI----- 379 (476)
T ss_dssp TTEEECGGGSSS-C----CCHHHHHHHHHHHHHHHHH-CCCCCCTTCCCEEECSSSEEEEEECCHHHHHHTTCCE-----
T ss_pred CCEEEEEccCCC-c----ccHHHHHHHHHHHHHHhcC-CCcccCCCCCCEEEECcCCEEEeeCCHHHHHhcCCCE-----
Confidence 359999999843 1 2477899999999999995 5544443 22332222 66899999999999999988
Q ss_pred hhhcccceec--cCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 169 TIVALEESMT--NGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 169 ~~~~~e~~~~--~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
+.... ...+++.| +|.....+ |+ +++.++|+||| +|.+|
T Consensus 380 -----~~~~~~~~~~~~~~~-~~~~~~~~-----k~--~~~~~~~~ilG-----~~~~g 420 (476)
T 3lad_A 380 -----NVGVFPFAASGRAMA-ANDTAGFV-----KV--IADAKTDRVLG-----VHVIG 420 (476)
T ss_dssp -----EEEEEEGGGCHHHHH-HTCCCCEE-----EE--EEETTTCBEEE-----EEEEE
T ss_pred -----EEEEEeccccchhee-cCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 33322 22333433 45556667 88 88888999999 77655
No 73
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.74 E-value=2.2e-06 Score=89.93 Aligned_cols=106 Identities=17% Similarity=0.091 Sum_probs=76.4
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhcccc
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVA 161 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~~ 161 (531)
..|||+|||... .+..++. +..|.+|||.+|++++| ....+.+.......+ ...+++|++|+.++..|+
T Consensus 275 ~~IyA~GD~~~~-~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~ 352 (452)
T 2cdu_A 275 RDIFAAGDSAAV-HYNPTNSNAYIPLATNAVRQGRLVGLNLTE-DKVKDMGTQSSSGLKLYGRTYVSTGINTALAKANNL 352 (452)
T ss_dssp TTEEECSTTBCE-EETTTTEEECCCCHHHHHHHHHHHHHTSSS-CCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC
T ss_pred CCEEEcceEEEe-ccccCCCeeecchHHHHHHHHHHHHHHhCC-CCCcCCCccceEEEEECCeeeEeecCCHHHHHHcCC
Confidence 469999999987 6666663 78899999999999994 555555544433333 678999999999999998
Q ss_pred eehhhhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeee
Q 009581 162 AVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWR 215 (531)
Q Consensus 162 ~~d~l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg 215 (531)
.+ .........+..++++.....+ |+ +++.++|+|+|
T Consensus 353 ~~----------~~~~~~~~~~~~~~~~~~~~~~-----k~--~~~~~~~~ilG 389 (452)
T 2cdu_A 353 KV----------SEVIIADNYRPEFMLSTDEVLM-----SL--VYDPKTRVILG 389 (452)
T ss_dssp CC----------EEEEEEEESSCTTBSCCCEEEE-----EE--EECTTTCBEEE
T ss_pred ce----------EEEEEecCCccccCCCCceEEE-----EE--EEECCCCEEEE
Confidence 87 3322233344555565554555 77 77778999999
No 74
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.71 E-value=2.8e-06 Score=89.03 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=80.1
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhcccc
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVA 161 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~~ 161 (531)
..||++|||... .+..+|. +..|.+|||.++++++| ....+.+.......+ ...+++|++|+.++..|+
T Consensus 274 ~~Iya~GD~~~~-~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~ 351 (447)
T 1nhp_A 274 PDVFAVGDATLI-KYNPADTEVNIALATNARKQGRFAVKNLEE-PVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGK 351 (447)
T ss_dssp TTEEECGGGSCE-EEGGGTEEECCCCHHHHHHHHHHHHHTSSS-CCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTC
T ss_pred CCEEEeeeEEEe-eccCCCCceechhHHHHHHHHHHHHHhhcC-CCCCCCCccccEEEEECCeeeEEecCCHHHHHHcCC
Confidence 469999999987 6655553 67899999999999994 555566555544444 567899999999999898
Q ss_pred eehhhhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 162 AVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 162 ~~d~l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
++ +........+..|+|+.....+ |+ +++.++|+|+| ++.++
T Consensus 352 ~~----------~~~~~~~~~~~~~~~~~~~~~~-----k~--~~~~~~~~ilG-----~~~~g 393 (447)
T 1nhp_A 352 ET----------KAVTVVEDYLMDFNPDKQKAWF-----KL--VYDPETTQILG-----AQLMS 393 (447)
T ss_dssp CC----------EEEEEEEESSCTTCTTCCEEEE-----EE--EECTTTCBEEE-----EEEEE
T ss_pred ce----------EEEEEEcCCccccCCCCceEEE-----EE--EEECCCCEEEE-----EEEEc
Confidence 87 3332334445566666655555 77 77777999999 66444
No 75
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.65 E-value=6.6e-06 Score=86.67 Aligned_cols=109 Identities=6% Similarity=-0.063 Sum_probs=76.6
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhcccccc-ccCcccccccc-ccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSS-IDQTGGSAGSK-LTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~-~~~~~~~~~~~-~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..|||+|||... ...+..|.+|||.+|++++|+.... ....+.+.+.. ...+++||+|+.+++.|.+|.+.+.
T Consensus 299 ~~iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~~~~~~~~~~ 373 (463)
T 4dna_A 299 PGIYALGDVTDR-----VQLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEVYRA 373 (463)
T ss_dssp TTEEECSGGGSS-----CCCHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHHHSSEEEEEEE
T ss_pred CCEEEEEecCCC-----CCChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEEECCCCeEEecCCHHHHHHcCCCeEEEEE
Confidence 359999999863 1236789999999999999643321 22334444444 6689999999999999987722211
Q ss_pred hhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 169 TIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 169 ~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
-.....+ .+++|.....+ |+ +++.++|+||| +|.+|
T Consensus 374 --------~~~~~~~-~~~~~~~~~~~-----k~--~~~~~~~~ilG-----~~~~g 409 (463)
T 4dna_A 374 --------EFRPMKA-TLSGRKEKTIM-----KL--VVNAADRKVVG-----AHILG 409 (463)
T ss_dssp --------EECCTTH-HHHCCCCCEEE-----EE--EEETTTCBEEE-----EEEES
T ss_pred --------eccccch-hhcCCCceEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 1112222 35788888888 88 88889999999 88666
No 76
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.62 E-value=5.6e-06 Score=88.11 Aligned_cols=106 Identities=13% Similarity=0.072 Sum_probs=74.4
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccCccccccc---cccccccchhhhhhhcccc
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGS---KLTNFSTDLKEASSKATVA 161 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~---~~~~~~tgl~e~~~~~~~~ 161 (531)
..|||+|||... .+..++. +..|.+|||.+|++++| ....+.+....... ....+++|++|+.++..|+
T Consensus 319 ~~IyA~GD~~~~-~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~ 396 (490)
T 2bc0_A 319 PGVYAIGDCATI-YDNATRDTNYIALASNAVRTGIVAAHNACG-TDLEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGF 396 (490)
T ss_dssp TTEEECGGGBCE-EETTTTEEECCCCHHHHHHHHHHHHHHHTT-CCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC
T ss_pred CCEEEeeeeEEe-ccccCCceeecccHHHHHHHHHHHHHHhcC-CCCCCCCcccceEEEECCcEeEEeeCCHHHHHHcCC
Confidence 369999999987 6666653 77899999999999995 55455554433222 3678999999999999998
Q ss_pred eehhhhhhhhcccceeccCCceeeEcc-CCcccCCCchhHhhhhhhhcccceeee
Q 009581 162 AVDVLRNTIVALEESMTNGASFVVYYY-GTTKESLPPEIRDALNLYEDRAVKLWR 215 (531)
Q Consensus 162 ~~d~l~~~~~~~e~~~~~~~~~~~y~~-G~~~~~lp~~v~kl~~~~e~~tg~ilg 215 (531)
.+ +........+..+++ +.....+ |+ +++.++|+|||
T Consensus 397 ~~----------~~~~~~~~~~~~~~~~~~~~~~~-----kl--~~~~~~~~ilG 434 (490)
T 2bc0_A 397 DA----------AVTEYTDNQKPEFIEHGNFPVTI-----KI--VYDKDSRRILG 434 (490)
T ss_dssp CE----------EEEEEEEESSCTTCCSSCCEEEE-----EE--EEETTTCBEEE
T ss_pred ce----------EEEEEecCCcccccCCCCceEEE-----EE--EEECCCCEEEE
Confidence 87 332222233444454 4444445 77 77778999999
No 77
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.51 E-value=1.1e-05 Score=86.76 Aligned_cols=117 Identities=9% Similarity=-0.028 Sum_probs=74.3
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhcccccccc-Ccccccccc-ccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSID-QTGGSAGSK-LTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~-~~~~~~~~~-~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..|||+|||... . ..+..|.+|||.+|++++| ....++ +.+...+.- ...+++|++|+.+++.|++|.+.+-
T Consensus 346 ~~IyA~GD~~~~-~----~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~ 419 (523)
T 1mo9_A 346 PNVYAVGDLIGG-P----MEMFKARKSGCYAARNVMG-EKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKM 419 (523)
T ss_dssp TTEEECGGGGCS-S----CSHHHHHHHHHHHHHHHTT-CCCCCCCCSCCEEEESSSEEEEEECCHHHHHHTTCCEEEEEE
T ss_pred CCEEEEeecCCC-c----ccHHHHHHHHHHHHHHHcC-CCCCCCCCCCCeEEECCCceEEEeCCHHHHHhCCCCEEEEEE
Confidence 369999999964 2 3466799999999999995 555443 333333322 6689999999999999998822211
Q ss_pred hhhc-ccceeccC-----CceeeEc-cCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 169 TIVA-LEESMTNG-----ASFVVYY-YGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 169 ~~~~-~e~~~~~~-----~~~~~y~-~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
.+.. .+..+-.+ ..++.++ ||.....+ |+ +++.++|+||| ++.+|
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----k~--~~~~~~~~ilG-----~~~~g 471 (523)
T 1mo9_A 420 PPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQ-----KI--VIDAKTRKVLG-----AHHVG 471 (523)
T ss_dssp SCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEE-----EE--EEETTTCBEEE-----EEEEE
T ss_pred ecccccccccccccccccccceEEeecCCCCEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 1110 00000000 2244555 36655556 77 78778999999 66554
No 78
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.48 E-value=1.2e-05 Score=85.28 Aligned_cols=109 Identities=9% Similarity=-0.056 Sum_probs=74.9
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhcccccc-ccCcccccccc-ccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSS-IDQTGGSAGSK-LTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~-~~~~~~~~~~~-~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..||++|||... ...+..|.+|||.+|++++++.... ....+.+.+.. ...+++||+|+.+++.|.+|.+.+.
T Consensus 319 ~~Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~ 393 (484)
T 3o0h_A 319 SHIWAVGDVTGH-----IQLTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRYKRVEIYRT 393 (484)
T ss_dssp TTEEECGGGGTS-----CCCHHHHHHHHHHHHHHHHC---CCCCCTTCCEEECCSSCEEEEECCHHHHHHHCSEEEEEEE
T ss_pred CCEEEEEecCCC-----CcCHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEEEECCCCEEEeeCCHHHHHHcCCCEEEEEe
Confidence 359999999863 1336789999999999999643322 22334455444 6789999999999999977722211
Q ss_pred hhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 169 TIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 169 ~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
. .....+ .+++|.....+ |+ +++.++|+||| +|.++
T Consensus 394 ~--------~~~~~~-~~~~~~~~~~~-----k~--~~~~~~~~ilG-----~~~~g 429 (484)
T 3o0h_A 394 V--------FRPMRN-VLSGSPEKMFM-----KL--VVDGESRIVVG-----AHVLG 429 (484)
T ss_dssp E--------ECCHHH-HHHTCCCCEEE-----EE--EEETTTCBEEE-----EEEES
T ss_pred c--------CCcchh-hccCCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 1 112222 35677777778 88 88889999999 77666
No 79
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.43 E-value=1.5e-05 Score=84.42 Aligned_cols=106 Identities=10% Similarity=-0.013 Sum_probs=72.7
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCcccccccc--ccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK--LTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~--~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..|||+|||... . ..+..|.+|||.+|++++| ....++...-..+.- ...+++||+|+.+++.|++|
T Consensus 317 ~~IyA~GD~~~~-~----~l~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~----- 385 (482)
T 1ojt_A 317 PHIYAIGDIVGQ-P----MLAHKAVHEGHVAAENCAG-HKAYFDARVIPGVAYTSPEVAWVGETELSAKASARKI----- 385 (482)
T ss_dssp TTEEECGGGTCS-S----CCHHHHHHHHHHHHHHHTT-CCCCCCCCCCCEEECSSSCEEEEECCHHHHHHHTCCE-----
T ss_pred CCEEEEEcccCC-C----ccHHHHHHHHHHHHHHHcC-CCccCCCCCCCEEEEcCCCeEEEeCCHHHHHhcCCCE-----
Confidence 369999999874 1 3367899999999999995 555665543232221 56899999999999999888
Q ss_pred hhhcccceec--cCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 169 TIVALEESMT--NGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 169 ~~~~~e~~~~--~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
..... ....++.+ +|.....+ |+ +++.++|+||| +|.++
T Consensus 386 -----~~~~~~~~~~~~~~~-~~~~~~~~-----k~--~~~~~~~~ilG-----~~~~g 426 (482)
T 1ojt_A 386 -----TKANFPWAASGRAIA-NGCDKPFT-----KL--IFDAETGRIIG-----GGIVG 426 (482)
T ss_dssp -----EEEEEEGGGCHHHHH-TTCCSCEE-----EE--EEETTTCBEEE-----EEEES
T ss_pred -----EEEEEEcCcchHHhh-cCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 32222 12223333 35555555 77 77778999999 66555
No 80
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.36 E-value=2.1e-05 Score=83.03 Aligned_cols=110 Identities=6% Similarity=-0.065 Sum_probs=69.0
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhcccc---ccccCcccccccc-ccccccchhhhhhhcccceehhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVF---SSIDQTGGSAGSK-LTNFSTDLKEASSKATVAAVDVL 166 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~---~~~~~~~~~~~~~-~~~~~tgl~e~~~~~~~~~~d~l 166 (531)
..|||+|||... ...+..|.+|||.+|++++++.. ..+..+ -..+.- ...+++||+|+.+++.+..+++.
T Consensus 324 ~~IyA~GD~~~~-----~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~-p~~~~~~p~~a~vGlte~~a~~~~~~~~~~ 397 (478)
T 3dk9_A 324 KGIYAVGDVCGK-----ALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNI-PTVVFSHPPIGTVGLTEDEAIHKYGIENVK 397 (478)
T ss_dssp TTEEECGGGGCS-----SCCHHHHHHHHHHHHHHHHSCCTTCCCCCTTC-CEEECCSSCEEEEECCHHHHHHHHCGGGEE
T ss_pred CCEEEEEecCCC-----CccHhHHHHHHHHHHHHHcCCCCcccCCCCCC-CeEEECCCceEEeeCCHHHHHhhCCCccEE
Confidence 359999999832 12366789999999999996411 223322 222222 66899999999999886433100
Q ss_pred hhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 167 RNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 167 ~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
+-..-..+..++. ++|.....+ |+ +++.++|+||| +|.+|
T Consensus 398 ------~~~~~~~~~~~~~-~~~~~~g~~-----k~--i~~~~~~~ilG-----~~~~g 437 (478)
T 3dk9_A 398 ------TYSTSFTPMYHAV-TKRKTKCVM-----KM--VCANKEEKVVG-----IHMQG 437 (478)
T ss_dssp ------EEEEEECCGGGGG-CSSCCCEEE-----EE--EEETTTTEEEE-----EEEES
T ss_pred ------EEEeecCcchhhh-hcCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 0001111222222 256666777 88 78888999999 77666
No 81
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.27 E-value=2.9e-05 Score=83.43 Aligned_cols=110 Identities=5% Similarity=-0.033 Sum_probs=66.5
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhccc--ceehh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATV--AAVDV 165 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~--~~~d~ 165 (531)
..|||+|||..- . ...+..|.+|||.+|+++++ ....+....+..... ...+++||+|+.+++.+ ..+++
T Consensus 347 ~~IyA~GD~~~g-~---~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~ 421 (519)
T 3qfa_A 347 PYIYAIGDILED-K---VELTPVAIQAGRLLAQRLYA-GSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 421 (519)
T ss_dssp TTEEECGGGBSS-S---CCCHHHHHHHHHHHHHHHHS-CCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEEE
T ss_pred CCEEEEEeccCC-C---CccHHHHHHHHHHHHHHHcC-CCCccCCCCcCcEEEECCCceEEecCCHHHHHhhCCCCCEEE
Confidence 359999999842 1 12366789999999999995 443333333333333 66899999999988762 23411
Q ss_pred hhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhc-ccceeeecccchHHHHH
Q 009581 166 LRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYED-RAVKLWRPVGSALQQVS 225 (531)
Q Consensus 166 l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~-~tg~ilg~~G~~aq~v~ 225 (531)
. .....+.++..+..+.....+ |+ +++. ++|+||| +|.+|
T Consensus 422 ~--------~~~~~~~~~~~~~~~~~~g~~-----Kl--i~~~~~~~~ilG-----a~i~g 462 (519)
T 3qfa_A 422 Y--------HSYFWPLEWTIPSRDNNKCYA-----KI--ICNTKDNERVVG-----FHVLG 462 (519)
T ss_dssp E--------EEEECCHHHHTTTCCTTTEEE-----EE--EEETTTTCEEEE-----EEEES
T ss_pred E--------EEeccchhhhhhccCCCcEEE-----EE--EEecCCCCEEEE-----EEEEC
Confidence 1 111112222222223334455 77 7765 5899999 77665
No 82
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.23 E-value=3.2e-05 Score=82.44 Aligned_cols=109 Identities=13% Similarity=0.008 Sum_probs=71.8
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccc-ccccc-Cccccccc-cccccccchhhhhhhcc-----cce
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRV-FSSID-QTGGSAGS-KLTNFSTDLKEASSKAT-----VAA 162 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~-~~~~~-~~~~~~~~-~~~~~~tgl~e~~~~~~-----~~~ 162 (531)
..|||+|||... . ..+..|.+|||.||+++++.. ....+ .+.-..+. ....+++||+|+.+++. |+.
T Consensus 306 ~~IyA~GD~~~~-~----~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~ 380 (492)
T 3ic9_A 306 DHIFVAGDANNT-L----TLLHEAADDGKVAGTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQIEDLYADQDAAN 380 (492)
T ss_dssp TTEEECGGGGTS-S----CSHHHHHHHHHHHHHHHHHTTSCCEECCCCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCC
T ss_pred CCEEEEEecCCC-C----ccHHHHHHHHHHHHHHHcCCCCCcccCCCCCcEEEECCCCeEEecCCHHHHHhccCccCCcc
Confidence 459999999865 1 236689999999999999522 11111 11222222 26689999999999987 366
Q ss_pred ehhhhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 163 VDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 163 ~d~l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
|++. .......+++.|+ |.....+ |+ +++.++|+||| +|.+|
T Consensus 381 ~~~~--------~~~~~~~~~a~~~-~~~~g~~-----kl--i~~~~~~~ilG-----~~~~g 422 (492)
T 3ic9_A 381 YVVG--------QVSFEGQGRSRVM-GKNKGLL-----NV--YADRTSGEFLG-----AEMFG 422 (492)
T ss_dssp EEEE--------EEEGGGCHHHHHT-TCCCCEE-----EE--EEETTTCBEEE-----EEEEE
T ss_pred EEEE--------EEEeccchhhhhc-CCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 6222 2223334444444 7666777 88 78888999999 66555
No 83
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.01 E-value=8.3e-05 Score=79.35 Aligned_cols=94 Identities=13% Similarity=-0.017 Sum_probs=59.6
Q ss_pred cchhhhhhhHHHHHhhccccc--cccCcccccccc-ccccccchhhhhhhcc-c-ceehhhhhhhhcccceeccCCceee
Q 009581 111 LTSIKKSTSEAVDNVVSRVFS--SIDQTGGSAGSK-LTNFSTDLKEASSKAT-V-AAVDVLRNTIVALEESMTNGASFVV 185 (531)
Q Consensus 111 ~~~a~k~~r~~~d~~~~g~~~--~~~~~~~~~~~~-~~~~~tgl~e~~~~~~-~-~~~d~l~~~~~~~e~~~~~~~~~~~ 185 (531)
+..|++|||.+|+|++++... .+++ +.+.+.- ...+++||+|+.+++. | ..+.+ -..-.....++.
T Consensus 354 ~~~A~~~g~~aa~~i~g~~~~~~~~~~-~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~~--------~~~~~~~~~~~~ 424 (500)
T 1onf_A 354 TPVAINAGRLLADRLFLKKTRKTNYKL-IPTVIFSHPPIGTIGLSEEAAIQIYGKENVKI--------YESKFTNLFFSV 424 (500)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCCCCCSS-CCEEECCSSCEEEEECCHHHHHHHTCGGGEEE--------EEEEECCGGGTT
T ss_pred hhHHHHHHHHHHHHHhCCCCccCCCCC-CCeEEEcCcceEEEeCCHHHHHhcCCCccEEE--------EEEECchhhhhh
Confidence 778999999999999953322 2333 2222222 6789999999988876 3 45511 111122334444
Q ss_pred E---ccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 186 Y---YYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 186 y---~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
| ..+.....+ |+ +++.++|+||| +|.+|
T Consensus 425 ~~~~~~~~~~~~~-----kl--i~~~~~~~ilG-----~~~~g 455 (500)
T 1onf_A 425 YDIEPELKEKTYL-----KL--VCVGKDELIKG-----LHIIG 455 (500)
T ss_dssp SCSCGGGSCCEEE-----EE--EEETTTTEEEE-----EEEES
T ss_pred ccccccCCCceEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 4 334555555 77 78888999999 77655
No 84
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.93 E-value=0.0001 Score=77.50 Aligned_cols=109 Identities=11% Similarity=-0.033 Sum_probs=69.8
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCccccccc--cccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGS--KLTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~--~~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..|||+|||... ....+..|.+|||.+|+++++ ....++...-..+. ....++.|++|+.+++.|++|.+.+-
T Consensus 307 ~~IyA~GD~~~~----~~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~ 381 (468)
T 2qae_A 307 PDVYAIGDVVDK----GPMLAHKAEDEGVACAEILAG-KPGHVNYGVIPAVIYTMPEVASVGKSEDELKKEGVAYKVGKF 381 (468)
T ss_dssp TTEEECGGGBSS----SCSCHHHHHHHHHHHHHHHTT-CCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEE
T ss_pred CCEEEeeccCCC----CCccHhHHHHHHHHHHHHHcC-CCccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEE
Confidence 469999999872 113366899999999999995 55555443222221 15689999999999999988822111
Q ss_pred hhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 169 TIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 169 ~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
-+ ....++. +.|.....+ |+ +++.++|+||| ++.++
T Consensus 382 ~~--------~~~~~~~-~~~~~~~~~-----kl--~~~~~~~~ilG-----~~~~g 417 (468)
T 2qae_A 382 PF--------NANSRAK-AVSTEDGFV-----KV--LVDKATDRILG-----VHIVC 417 (468)
T ss_dssp EG--------GGCHHHH-HTTCCCCEE-----EE--EEETTTCBEEE-----EEEEE
T ss_pred ec--------ccchhhh-hcCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 11 1112222 234444444 77 77778999999 66444
No 85
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.90 E-value=0.00012 Score=76.86 Aligned_cols=108 Identities=11% Similarity=-0.012 Sum_probs=70.1
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCccccccc--cccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGS--KLTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~--~~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..|||+|||... . ..+..|.+|||.+|+++.+ ....++...-..+. ....+++|++|+.+++.|++|.+.+-
T Consensus 301 ~~Iya~GD~~~~-~----~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~ 374 (455)
T 1ebd_A 301 PNIFAIGDIVPG-P----ALAHKASYEGKVAAEAIAG-HPSAVDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVIAAKF 374 (455)
T ss_dssp TTEEECGGGSSS-C----CCHHHHHHHHHHHHHHHTS-CCCCCCCSCCCEEECSSSCEEEEECCHHHHHTTTCCEEEEEE
T ss_pred CCEEEEeccCCC-c----ccHHHHHHHHHHHHHHHcC-CCccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEE
Confidence 469999999864 1 2366899999999999995 55555443212211 15678999999999999988822211
Q ss_pred hhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 169 TIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 169 ~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
.+ ....++.+ .|.....+ |+ +++.++|+||| ++.++
T Consensus 375 ~~--------~~~~~~~~-~~~~~~~~-----k~--~~~~~~~~ilG-----~~~~g 410 (455)
T 1ebd_A 375 PF--------AANGRALA-LNDTDGFL-----KL--VVRKEDGVIIG-----AQIIG 410 (455)
T ss_dssp EG--------GGCHHHHH-HTCCCCEE-----EE--EEETTTTEEEE-----EEEES
T ss_pred Ec--------CcchHHhh-cCCCcEEE-----EE--EEECCCCEEEE-----EEEeC
Confidence 11 11222222 24444445 77 77778999999 66554
No 86
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.87 E-value=0.00012 Score=77.24 Aligned_cols=108 Identities=13% Similarity=0.022 Sum_probs=69.9
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCccccccc-cccccccchhhhhhhcccceehhhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGS-KLTNFSTDLKEASSKATVAAVDVLRNT 169 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~-~~~~~~tgl~e~~~~~~~~~~d~l~~~ 169 (531)
..|||+|||... . ..+..|.+|||.+|++++| ....++..+...+. ....+++|++|+.+++.|+++.+.+-.
T Consensus 302 ~~Iya~GD~~~~-~----~l~~~A~~~g~~aa~~i~g-~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~ 375 (464)
T 2eq6_A 302 PGVYAIGDAARP-P----LLAHKAMREGLIAAENAAG-KDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFP 375 (464)
T ss_dssp TTEEECGGGTCS-S----CCHHHHHHHHHHHHHHHTT-CCCCCCCCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEE
T ss_pred CCEEEEeccCCC-c----ccHHHHHHHHHHHHHHhcC-CCcccCCCCCeEEECCCCEEEEeCCHHHHHhcCCCEEEEEEE
Confidence 469999999864 2 2366899999999999994 55545543222211 256889999999999999888221111
Q ss_pred hhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 170 IVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 170 ~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
+ ...+++.+ .|.....+ |+ +++.++|+||| ++.++
T Consensus 376 ~--------~~~~~~~~-~~~~~g~~-----k~--~~~~~~~~ilG-----~~~~g 410 (464)
T 2eq6_A 376 L--------AASGRALT-LGGAEGMV-----KV--VGDEETDLLLG-----VFIVG 410 (464)
T ss_dssp G--------GGCHHHHH-TSCCCCEE-----EE--EEETTTCBEEE-----EEEEE
T ss_pred c--------Ccchhhhh-cCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 1 11222222 24444444 76 67777999999 66444
No 87
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.85 E-value=0.00011 Score=77.10 Aligned_cols=108 Identities=10% Similarity=0.010 Sum_probs=69.3
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCccccccc--cccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGS--KLTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~--~~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..|||+|||... . ..+..|.+|||.+|+++++ ....++...-..+. ....+++|++|+.+++.|++|.+.+-
T Consensus 310 ~~Iya~GD~~~~-~----~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~ 383 (470)
T 1dxl_A 310 SGVYAIGDVIPG-P----MLAHKAEEDGVACVEYLAG-KVGHVDYDKVPGVVYTNPEVASVGKTEEQVKETGVEYRVGKF 383 (470)
T ss_dssp TTEEECSTTSSS-C----CCHHHHHHHHHHHHHHHTT-SCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEE
T ss_pred CCEEEEeccCCC-C----ccHHHHHHHHHHHHHHHcC-CCcCCCCCCCCEEEECCCceEEEcCCHHHHHhcCCcEEEEEE
Confidence 469999999864 1 2366799999999999995 55555543222221 15689999999999999988822111
Q ss_pred hhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 169 TIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 169 ~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
-+ ....++.+ .|.....+ |+ +++.++|+|+| ++.++
T Consensus 384 ~~--------~~~~~~~~-~~~~~~~~-----k~--~~~~~~~~ilG-----~~~~g 419 (470)
T 1dxl_A 384 PF--------MANSRAKA-IDNAEGLV-----KI--IAEKETDKILG-----VHIMA 419 (470)
T ss_dssp EG--------GGCHHHHH-HSCCCCEE-----EE--EEETTTCBEEE-----EEEEE
T ss_pred ec--------ccchHHHh-cCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 11 11122222 24444444 66 77778999999 66444
No 88
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.81 E-value=0.00013 Score=76.74 Aligned_cols=107 Identities=10% Similarity=-0.042 Sum_probs=68.8
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhcccccc-ccC-cccccc-ccccccccchhhhhhhcccceehhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSS-IDQ-TGGSAG-SKLTNFSTDLKEASSKATVAAVDVLR 167 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~-~~~-~~~~~~-~~~~~~~tgl~e~~~~~~~~~~d~l~ 167 (531)
..|||+|||... . ..+..|.+|||.+|++++|+.... ++- .+...+ .....+++||+|+.+++.|++|
T Consensus 302 ~~IyA~GD~~~~-~----~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~---- 372 (464)
T 2a8x_A 302 GHIYAIGDVNGL-L----QLAHVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNEGYDV---- 372 (464)
T ss_dssp TTEEECGGGGCS-S----CSHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEEECSSSEEEEEECCHHHHHHTTCCE----
T ss_pred CCEEEeECcCCC-c----cCHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEEECCCCeEEEcCCHHHHHhcCCCE----
Confidence 469999999864 1 236689999999999999524444 221 111111 1156899999999999999888
Q ss_pred hhhhcccceec--cCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 168 NTIVALEESMT--NGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 168 ~~~~~~e~~~~--~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
+.... ....++.+ .|.....+ |+ +++.++|+|+| ++.++
T Consensus 373 ------~~~~~~~~~~~~~~~-~~~~~~~~-----k~--~~~~~~~~ilG-----~~~~g 413 (464)
T 2a8x_A 373 ------VVAKFPFTANAKAHG-VGDPSGFV-----KL--VADAKHGELLG-----GHLVG 413 (464)
T ss_dssp ------EEEEEEGGGCHHHHH-HTCCCCEE-----EE--EEETTTTEEEE-----EEEEE
T ss_pred ------EEEEEEcchhhhhhh-cCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 22221 12222222 24444445 77 77778999999 66554
No 89
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.78 E-value=0.00017 Score=76.80 Aligned_cols=102 Identities=8% Similarity=-0.030 Sum_probs=66.5
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhcccccccc-Cccccccc-cccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSID-QTGGSAGS-KLTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~-~~~~~~~~-~~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..|||+|||... . ..+..|.+|||.+|++++|+....++ ..+...+. ....+++|++|..+++.|++|
T Consensus 310 ~~IyA~GD~~~~-~----~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~----- 379 (499)
T 1xdi_A 310 TGIYAAGDCTGL-L----PLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSVAA----- 379 (499)
T ss_dssp TTEEECSGGGTS-C----SCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEECSSSEEEEEESCHHHHHHTSSCE-----
T ss_pred CCEEEEeccCCC-c----ccHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEEEecCCceEeCCCHHHHHhCCCCE-----
Confidence 469999999864 1 23668999999999999953123332 12222221 266899999999999999988
Q ss_pred hhhcccceecc--CCceeeEccCCcccCCCchhHhhhhhhhcccceeee
Q 009581 169 TIVALEESMTN--GASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWR 215 (531)
Q Consensus 169 ~~~~~e~~~~~--~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg 215 (531)
+..... ..+++. ++|.....+ |+ +++.++|+|||
T Consensus 380 -----~~~~~~~~~~~~~~-~~~~~~g~~-----k~--~~~~~~~~ilG 415 (499)
T 1xdi_A 380 -----RTIMLPLRTNARAK-MSEMRHGFV-----KI--FCRRSTGVVIG 415 (499)
T ss_dssp -----EEEEEESTTSHHHH-HTTCSSCEE-----EE--EEETTTCBEEE
T ss_pred -----EEEEEecCccccee-ecCCCceEE-----EE--EEECCCCEEEE
Confidence 322221 122222 245544455 77 77777999999
No 90
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.77 E-value=0.00021 Score=75.55 Aligned_cols=64 Identities=5% Similarity=-0.067 Sum_probs=44.2
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccc--cccCcccccccc-ccccccchhhhhhhcc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFS--SIDQTGGSAGSK-LTNFSTDLKEASSKAT 159 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~--~~~~~~~~~~~~-~~~~~tgl~e~~~~~~ 159 (531)
..|||+|||..- . ...+..|.+|||.+|++++|+... .+.. +...+.. ...+++||+|+.+++.
T Consensus 319 ~~IyA~GD~~~~-~---~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~-~p~~~~~~p~~a~vGlte~~a~~~ 385 (483)
T 3dgh_A 319 ANIYAVGDIIYG-K---PELTPVAVLAGRLLARRLYGGSTQRMDYKD-VATTVFTPLEYACVGLSEEDAVKQ 385 (483)
T ss_dssp TTEEECSTTBTT-S---CCCHHHHHHHHHHHHHHHHSCCCCCCCCTT-CCEEECSSSEEEEEECCHHHHHHH
T ss_pred CCEEEEEcccCC-C---CccHHHHHHHHHHHHHHHcCCCCCcCCCCC-CCEEEECCCccEEEeCCHHHHHhh
Confidence 459999999842 1 123567999999999999953322 2333 2333333 6689999999998875
No 91
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.73 E-value=0.00017 Score=76.03 Aligned_cols=108 Identities=10% Similarity=-0.050 Sum_probs=68.7
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccC-cccccc-ccccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQ-TGGSAG-SKLTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~-~~~~~~-~~~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..|||+|||... . ..+..|.+|||.+|+++++ ....++- .+-..+ .....+++|++|+.+++.|++|.+.+.
T Consensus 313 ~~IyA~GD~~~~-~----~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~ 386 (474)
T 1zmd_A 313 PNIYAIGDVVAG-P----MLAHKAEDEGIICVEGMAG-GAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKF 386 (474)
T ss_dssp TTEEECGGGSSS-C----CCHHHHHHHHHHHHHHHTT-CCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEE
T ss_pred CCEEEeeecCCC-C----ccHHHHHHHHHHHHHHhcC-CCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEEEE
Confidence 469999999864 1 2366899999999999995 4443432 111211 125689999999999999988822211
Q ss_pred hhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 169 TIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 169 ~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
.+. ..+++.+ +|.....+ |+ +++.++|+||| ++.++
T Consensus 387 ~~~--------~~~~~~~-~~~~~~~~-----k~--~~~~~~~~ilG-----~~~~g 422 (474)
T 1zmd_A 387 PFA--------ANSRAKT-NADTDGMV-----KI--LGQKSTDRVLG-----AHILG 422 (474)
T ss_dssp EGG--------GCHHHHH-TTCCCCEE-----EE--EEETTTCBEEE-----EEEEE
T ss_pred ecc--------cchhhhh-cCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 111 1222222 34444444 77 77777999999 66444
No 92
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.71 E-value=0.00018 Score=76.25 Aligned_cols=102 Identities=10% Similarity=-0.019 Sum_probs=64.3
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccC--cccccccc-ccccccchhhhhhhcc-c-ceehh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQ--TGGSAGSK-LTNFSTDLKEASSKAT-V-AAVDV 165 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~--~~~~~~~~-~~~~~tgl~e~~~~~~-~-~~~d~ 165 (531)
..|||+|||+.. .. ..+..|.+|||.+|+++++ ....... .+...+.. ...+++||+|+.+++. + ..+
T Consensus 319 ~~IyA~GD~~~~-~~---~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~-- 391 (488)
T 3dgz_A 319 PHIYAIGDVAEG-RP---ELTPTAIKAGKLLAQRLFG-KSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHV-- 391 (488)
T ss_dssp TTEEECGGGBTT-CC---CCHHHHHHHHHHHHHHHHS-CCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGE--
T ss_pred CCEEEeEEecCC-CC---cchhHHHHHHHHHHHHHcC-CCCccCCCCCCCEEEECCCCeEEEeCCHHHHHhhCCCCcE--
Confidence 359999999853 11 2256799999999999995 4332212 23333333 6689999999988875 3 234
Q ss_pred hhhhhhcccceeccCCceeeEccC--------CcccCCCchhHhhhhhhh-cccceeeecccchHHHHH
Q 009581 166 LRNTIVALEESMTNGASFVVYYYG--------TTKESLPPEIRDALNLYE-DRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 166 l~~~~~~~e~~~~~~~~~~~y~~G--------~~~~~lp~~v~kl~~~~e-~~tg~ilg~~G~~aq~v~ 225 (531)
+.. +..|+|. .....+ |+ +++ .++|+||| +|.++
T Consensus 392 --------~~~------~~~~~~~~~~~~~~~~~~g~~-----k~--i~~~~~~~~ilG-----~~~~g 434 (488)
T 3dgz_A 392 --------EVY------HAYYKPLEFTVADRDASQCYI-----KM--VCMREPPQLVLG-----LHFLG 434 (488)
T ss_dssp --------EEE------EEECCCHHHHHTTCCCTTCEE-----EE--EEESSTTCBEEE-----EEEEE
T ss_pred --------EEE------EccccchhhhhhccCCCcEEE-----EE--EEecCCCCEEEE-----EEEEC
Confidence 111 1222221 133444 77 787 57999999 77665
No 93
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.70 E-value=0.00016 Score=76.06 Aligned_cols=107 Identities=11% Similarity=0.043 Sum_probs=68.3
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCcccccc--ccccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAG--SKLTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~--~~~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..||++|||... . ..+..|.+|||.+|+++.++ ...++...-... .....+++|++|..++..|++|
T Consensus 302 ~~iya~GD~~~~-~----~~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~~~~~~a~vG~~~~~a~~~g~~~----- 370 (467)
T 1zk7_A 302 PNIYAAGDCTDQ-P----QFVYVAAAAGTRAAINMTGG-DAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIET----- 370 (467)
T ss_dssp TTEEECSTTBSS-C----CCHHHHHHHHHHHHHHHTTC-CCCCCCTTCEEEECSSSEEEEEECCHHHHHHTTCCE-----
T ss_pred CCEEEEeccCCC-c----ccHHHHHHHHHHHHHHHcCC-CcccCCCCCCEEEecCCceEEEecCHHHHHhcCCCe-----
Confidence 469999999875 2 23667999999999999953 433332221111 1156889999999999999888
Q ss_pred hhhcccceeccCCceeeEc-cCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 169 TIVALEESMTNGASFVVYY-YGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 169 ~~~~~e~~~~~~~~~~~y~-~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
........+...++ .+.....+ |+ +++.++|+||| ++.++
T Consensus 371 -----~~~~~~~~~~~~~~~~~~~~~~~-----kl--~~~~~~~~ilG-----~~~~g 411 (467)
T 1zk7_A 371 -----DSRTLTLDNVPRALANFDTRGFI-----KL--VIEEGSHRLIG-----VQAVA 411 (467)
T ss_dssp -----EEEEEEGGGCHHHHHTTCCCCEE-----EE--EEETTTCBEEE-----EEEEE
T ss_pred -----EEEEEecccchhhhhcCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 33222221111121 23334444 66 67777999999 66444
No 94
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.64 E-value=0.00023 Score=77.57 Aligned_cols=68 Identities=7% Similarity=-0.023 Sum_probs=47.6
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhccccee
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAV 163 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~~~~ 163 (531)
..|||+|||+.. +..+ +..|.+|+|+++++++++.....+- ......- ...|++||+|+.+++.++.+
T Consensus 351 p~IyAiGDv~~~-~p~L---a~~A~~eg~~aa~~i~g~~~~~~d~-~~iP~~vft~PeiA~VGlTE~eA~~~g~~~ 421 (542)
T 4b1b_A 351 PSIFAVGDVAEN-VPEL---APVAIKAGEILARRLFKDSDEIMDY-SYIPTSIYTPIEYGACGYSEEKAYELYGKS 421 (542)
T ss_dssp TTEEECTTSBTT-CCCC---HHHHHHHHHHHHHHHHSCCCCCCCC-SSCCEEECSSSCEEEEECCHHHHHHHHCTT
T ss_pred CCeEEeccccCC-chhH---HHHHHHHHHHHHHHHhcCCCcccCC-CCCceEEeCCCCeEEEeCCHHHHHHhCCCC
Confidence 349999999865 4333 4578999999999999643332222 1112222 45899999999999988766
No 95
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.56 E-value=0.00027 Score=75.48 Aligned_cols=108 Identities=9% Similarity=-0.015 Sum_probs=65.5
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhcccceehhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDVLR 167 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~~~~d~l~ 167 (531)
..|||+|||... ...+..|.+|||.+|+++++ .........+..... ...+++||+|+.+++.+..+.+.+
T Consensus 323 ~~IyA~GD~~~~-----~~l~~~A~~~g~~aa~~i~g-~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~v~~ 396 (495)
T 2wpf_A 323 PNIYAIGDITDR-----LMLTPVAINEGAALVDTVFG-NKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYM 396 (495)
T ss_dssp TTEEECGGGGCS-----CCCHHHHHHHHHHHHHHHHS-SCCCCCCCSSCEEEECCSSCEEEEECCHHHHHHHSSEEEEEE
T ss_pred CCEEEEeccCCC-----ccCHHHHHHHHHHHHHHhcC-CCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEEE
Confidence 369999999853 12467899999999999995 332222222222222 568899999999888776662211
Q ss_pred hhhhcccceeccCCceeeEccCCcccC-CCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 168 NTIVALEESMTNGASFVVYYYGTTKES-LPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 168 ~~~~~~e~~~~~~~~~~~y~~G~~~~~-lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
..+...... +.-+..... + |+ +++.++|+||| +|.+|
T Consensus 397 ~~~~~~~~~---------~~~~~~~~~~~-----kl--v~~~~~~~ilG-----~~~~g 434 (495)
T 2wpf_A 397 SSFTPLMHN---------ISGSKYKKFVA-----KI--VTNHSDGTVLG-----VHLLG 434 (495)
T ss_dssp EEECCTHHH---------HHSCTTCCEEE-----EE--EEETTTCBEEE-----EEEES
T ss_pred EecCchhhh---------hhcCCCcEEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 100000000 001123333 4 77 78788999999 77555
No 96
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.00048 Score=72.95 Aligned_cols=108 Identities=7% Similarity=-0.033 Sum_probs=66.4
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCcc-----cccccc-ccccccchhhhhhhcc-c-ce
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTG-----GSAGSK-LTNFSTDLKEASSKAT-V-AA 162 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~-----~~~~~~-~~~~~tgl~e~~~~~~-~-~~ 162 (531)
..|||+|||... ...+..|.+|||.+|+++++ ....|.+.. .+.+.- ...+++||+|+.+++. + ..
T Consensus 315 ~~IyA~GD~~~~-----~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~~~~~p~~~~~~~~~~~vGl~e~~a~~~~~~~~ 388 (479)
T 2hqm_A 315 PNIYSLGDVVGK-----VELTPVAIAAGRKLSNRLFG-PEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKEN 388 (479)
T ss_dssp TTEEECGGGTTS-----SCCHHHHHHHHHHHHHHHHS-CGGGTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGG
T ss_pred CCEEEEEecCCC-----cccHHHHHHHHHHHHHHhcC-CCccCcccCCCCCCCeEEECCCCeEEEeCCHHHHHhcCCCCc
Confidence 469999999543 12366899999999999995 432232222 222221 5588999999988776 3 22
Q ss_pred ehhhhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 163 VDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 163 ~d~l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
+.+.+. -.....++ +++|.....+ |+ +++.++|+||| +|.+|
T Consensus 389 ~~~~~~--------~~~~~~~~-~~~~~~~~~~-----kl--i~~~~~~~ilG-----~~~~g 430 (479)
T 2hqm_A 389 IKVYNS--------KFTAMYYA-MLSEKSPTRY-----KI--VCAGPNEKVVG-----LHIVG 430 (479)
T ss_dssp EEEEEE--------EECCGGGG-GCSSCCCEEE-----EE--EEETTTTEEEE-----EEEES
T ss_pred EEEEEE--------eccHHHHH-hhcCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 411111 11112221 2455555555 77 78888999999 77655
No 97
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=96.52 E-value=0.0032 Score=57.05 Aligned_cols=104 Identities=12% Similarity=0.080 Sum_probs=58.6
Q ss_pred ccCHHHHHHHHhCCCCcEEEEeCChhh------------hhhc-CCccccccccccccccCcccccchhhhhhcCchhhH
Q 009581 271 DLSPKSTLELLRGKENAVLIDVRHEDL------------RERD-GIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELD 337 (531)
Q Consensus 271 ~ISp~El~elL~~~~~avLIDVRs~eE------------f~~G-HIPGAi~a~~~~~~nIPl~eL~~~~~~Llk~p~eL~ 337 (531)
.++++++..+.+ ..-..|||+|++.| |... +|+|.+ ++|+.... ...+.+.
T Consensus 29 ~~~~~d~~~L~~-~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~--------~iPv~~~~-------~~~~~~~ 92 (156)
T 2f46_A 29 QLTKADAEQIAQ-LGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFH--------HQPVTARD-------IQKHDVE 92 (156)
T ss_dssp CCCGGGHHHHHH-HTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEE--------ECCCCTTT-------CCHHHHH
T ss_pred CCCHHHHHHHHH-CCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhhe--------ECccCCCC-------CCHHHHH
Confidence 577777776653 23358999998766 2223 477666 88865321 0112222
Q ss_pred HHHHHHHHhhhcccCCCcEEEEEeCCCcHHHHHHHH-HHHccCCceEEecchHHHHHHcCCceec
Q 009581 338 DTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARS-LRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (531)
Q Consensus 338 ~~L~algI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~-L~~lGf~nV~~L~GG~~aW~~aGLPV~~ 401 (531)
+.+..+ . ..+.+|+|||++|.|+..++-+ |...|.+ .+.=+..-+..|+.+..
T Consensus 93 ~~~~~l--~-----~~~~pVlvHC~sG~Rs~~l~al~l~~~g~~----~~~a~~~~~~~g~~l~~ 146 (156)
T 2f46_A 93 TFRQLI--G-----QAEYPVLAYCRTGTRCSLLWGFRRAAEGMP----VDEIIRRAQAAGVNLEN 146 (156)
T ss_dssp HHHHHH--H-----TSCSSEEEECSSSHHHHHHHHHHHHHTTCC----HHHHHHHHHHTTCCCGG
T ss_pred HHHHHH--H-----hCCCCEEEECCCCCCHHHHHHHHHHHcCCC----HHHHHHHHHHcCCCcHH
Confidence 222111 1 2478999999999988754333 2445653 22334455566665544
No 98
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.41 E-value=0.00037 Score=73.42 Aligned_cols=101 Identities=8% Similarity=-0.071 Sum_probs=64.7
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhcccccc--ccCccccccccccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSS--IDQTGGSAGSKLTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~--~~~~~~~~~~~~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..|||+|||... . ..+..|.+|||.+|+++++ .... +..+--.--.....+++|++|+.+++.|+++
T Consensus 318 ~~IyA~GD~~~~-~----~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~----- 386 (478)
T 1v59_A 318 PHIKVVGDVTFG-P----MLAHKAEEEGIAAVEMLKT-GHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGIDY----- 386 (478)
T ss_dssp TTEEECGGGSSS-C----CCHHHHHHHHHHHHHHHHH-SCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCE-----
T ss_pred CCEEEeeccCCC-c----ccHHHHHHHHHHHHHHHcC-CCCCCCCCCCCEEEEcCCcEEEEECCHHHHHHcCCCE-----
Confidence 469999999875 2 2356899999999999995 4332 2222111111156899999999999999888
Q ss_pred hhhcccceec--cCCceeeEccCCcccCCCchhHhhhhhhhcccceeee
Q 009581 169 TIVALEESMT--NGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWR 215 (531)
Q Consensus 169 ~~~~~e~~~~--~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg 215 (531)
+.... ...+++.+ .|.....+ |+ +++.++|+|+|
T Consensus 387 -----~~~~~~~~~~~~~~~-~~~~~~~~-----k~--~~~~~~~~ilG 422 (478)
T 1v59_A 387 -----KIGKFPFAANSRAKT-NQDTEGFV-----KI--LIDSKTERILG 422 (478)
T ss_dssp -----EEEEEEGGGCHHHHH-TTCCCCEE-----EE--EEETTTCBEEE
T ss_pred -----EEEEEecccchhhhh-cCCCcEEE-----EE--EEECCCCEEEE
Confidence 22221 11122222 23333444 66 67777999999
No 99
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.28 E-value=0.00054 Score=71.95 Aligned_cols=109 Identities=6% Similarity=-0.010 Sum_probs=67.2
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhcccccc-cc-Ccccccccc-ccccccchhhhhhhcc-c-ceehh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSS-ID-QTGGSAGSK-LTNFSTDLKEASSKAT-V-AAVDV 165 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~-~~-~~~~~~~~~-~~~~~tgl~e~~~~~~-~-~~~d~ 165 (531)
..|||+|||... . ..+..|.+|||.+|++++++.... .+ ..+.+.+.- ...+++||+|+.+++. | ..+.+
T Consensus 296 ~~IyA~GD~~~~-~----~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~g~~~~~~ 370 (450)
T 1ges_A 296 EGIYAVGDNTGA-V----ELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKV 370 (450)
T ss_dssp TTEEECSGGGTS-C----CCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCGGGEEE
T ss_pred CCEEEEeccCCC-C----ccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCCcEEE
Confidence 469999999753 1 236679999999999999533221 11 122222222 5688999999988876 4 45522
Q ss_pred hhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 166 LRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 166 l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
.+.. ..+..++ ++++.....+ |+ +++.++|+||| +|.++
T Consensus 371 ~~~~--------~~~~~~~-~~~~~~~~~~-----k~--~~~~~~~~ilG-----~~~~g 409 (450)
T 1ges_A 371 YKSS--------FTAMYTA-VTTHRQPCRM-----KL--VCVGSEEKIVG-----IHGIG 409 (450)
T ss_dssp EEEE--------EECHHHH-TSSSCCEEEE-----EE--EEETTTTEEEE-----EEEES
T ss_pred EEEE--------CchhhHH-HhcCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 1111 1111222 2455555555 77 78788999999 77555
No 100
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.28 E-value=0.0005 Score=73.18 Aligned_cols=67 Identities=9% Similarity=-0.056 Sum_probs=47.7
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhccccee
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAV 163 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~~~~~ 163 (531)
..|||+|||... ...+..|.+|||.+|+++++ ....+....+..... ...+++||+|+.+++.+..+
T Consensus 319 ~~IyA~GD~~~~-----~~l~~~A~~~g~~aa~~i~g-~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~~~~ 388 (490)
T 1fec_A 319 DNIYAIGDVTDR-----VMLTPVAINEGAAFVDTVFA-NKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQV 388 (490)
T ss_dssp TTEEECGGGGCS-----CCCHHHHHHHHHHHHHHHHS-SCCCCCCCSSCCEEECCSSCEEEEECCHHHHHHHCSEE
T ss_pred CCEEEEeccCCC-----ccCHHHHHHHHHHHHHHhcC-CCCCcCCCCCccEEEECCCCeEEEeCCHHHHHhcCCCE
Confidence 469999999853 13477899999999999995 333223333333333 56889999999888876666
No 101
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.26 E-value=0.0013 Score=69.16 Aligned_cols=103 Identities=2% Similarity=-0.130 Sum_probs=65.8
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCccccccc--cccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGS--KLTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~--~~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..||++|||... . ..+..|.+|||.+|+++.| ....++...-.... ....+++|++|..+++.|+++.+.+.
T Consensus 298 ~~Iya~GD~~~~-~----~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~p~~a~vG~~e~~a~~~g~~~~~~~~ 371 (458)
T 1lvl_A 298 HNVWAIGDVAGE-P----MLAHRAMAQGEMVAEIIAG-KARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQGLDCIVAQF 371 (458)
T ss_dssp TTEEECGGGGCS-S----CCHHHHHHHHHHHHHHHTT-CCCCCCCSCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEE
T ss_pred CCEEEeeccCCC-c----ccHHHHHHHHHHHHHHhcC-CCccCCCCCCCEEEECCCCeEEEeCCHHHHHHcCCCEEEEEE
Confidence 469999999875 2 2366899999999999995 54444433211111 14678999999999999988822111
Q ss_pred hhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeee
Q 009581 169 TIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWR 215 (531)
Q Consensus 169 ~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg 215 (531)
. ....+++.+ .|.....+ |+ +++.++++|+|
T Consensus 372 ~--------~~~~~~~~~-~~~~~g~~-----kl--~~d~~~~~ilG 402 (458)
T 1lvl_A 372 P--------FAANGRAMS-LESKSGFV-----RV--VARRDNHLILG 402 (458)
T ss_dssp E--------GGGCHHHHH-TTCCCCEE-----EE--EEETTTCBEEE
T ss_pred E--------Cccchhhhh-cCCCcEEE-----EE--EEECCCCEEEE
Confidence 1 111222222 24433344 66 67777999999
No 102
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.00 E-value=0.0011 Score=70.11 Aligned_cols=108 Identities=5% Similarity=0.000 Sum_probs=66.5
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccc---cccCcccccccc-ccccccchhhhhhhcc-cceehh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFS---SIDQTGGSAGSK-LTNFSTDLKEASSKAT-VAAVDV 165 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~---~~~~~~~~~~~~-~~~~~tgl~e~~~~~~-~~~~d~ 165 (531)
..|||+|||... ...+..|.+|||.+|++++|+... .+. .+.+.+.- ...+++||+|+.+++. |..+.+
T Consensus 295 ~~Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~-~~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~ 368 (463)
T 2r9z_A 295 PGVYALGDITGR-----DQLTPVAIAAGRRLAERLFDGQSERKLDYD-NIPTVVFAHPPLSKVGLSEPEARERLGDVLTV 368 (463)
T ss_dssp TTEEECGGGGTS-----CCCHHHHHHHHHHHHHHHHSCCTTCCCCCS-SCCEEECCSSCEEEEECCHHHHHHHHCSCEEE
T ss_pred CCEEEEeecCCC-----cccHHHHHHHHHHHHHHHcCCCCcccCCCC-CCCEEEeCCCCeEEEcCCHHHHHhcCCCCEEE
Confidence 469999999753 123667999999999999953322 122 22222222 5688999999988876 555522
Q ss_pred hhhhhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeeecccchHHHHH
Q 009581 166 LRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVS 225 (531)
Q Consensus 166 l~~~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg~~G~~aq~v~ 225 (531)
.+..+ ....++ ++++.....+ |+ +++.++|+||| +|.++
T Consensus 369 ~~~~~--------~~~~~~-~~~~~~~~~~-----kl--v~~~~~~~ilG-----~~~~g 407 (463)
T 2r9z_A 369 YETSF--------TPMRYA-LNEHGPKTAM-----KL--VCAGPEQRVVG-----VHVIG 407 (463)
T ss_dssp EEEEE--------CCGGGT-TSSSCCCEEE-----EE--EEETTTTEEEE-----EEEES
T ss_pred EEEEc--------ccchhh-hhcCCCcEEE-----EE--EEECCCCEEEE-----EEEEC
Confidence 21111 111111 1344444455 77 77778999999 77555
No 103
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.63 E-value=0.0029 Score=66.24 Aligned_cols=103 Identities=13% Similarity=0.072 Sum_probs=64.5
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCcccccc--ccccccccchhhhhhhcccceehhhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAG--SKLTNFSTDLKEASSKATVAAVDVLRN 168 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~--~~~~~~~tgl~e~~~~~~~~~~d~l~~ 168 (531)
..||++|||... . ..+..|.+||+.+|+++.+ ....++...-... .....++.|++|+.+++.|+++.+-+.
T Consensus 295 ~~iya~GD~~~~-~----~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~~~~~~~~~a~~G~~~~~a~~~g~~~~~~~~ 368 (455)
T 2yqu_A 295 PHIYAIGDVVRG-P----MLAHKASEEGIAAVEHMVR-GFGHVDYQAIPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKF 368 (455)
T ss_dssp TTEEECGGGSSS-C----CCHHHHHHHHHHHHHHHHH-SCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEE
T ss_pred CCEEEEecCCCC-c----cCHHHHHHhHHHHHHHHcC-CCccCCCCCCCEEEEcCCceEEEECCHHHHHHcCCCEEEEEE
Confidence 469999999864 1 2366799999999999995 5444443211111 114578999999999999988821111
Q ss_pred hhhcccceeccCCceeeEccCCcccCCCchhHhhhhhhhcccceeee
Q 009581 169 TIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWR 215 (531)
Q Consensus 169 ~~~~~e~~~~~~~~~~~y~~G~~~~~lp~~v~kl~~~~e~~tg~ilg 215 (531)
. .....++.+ .|.....+ |+ +++.++|+|+|
T Consensus 369 ~--------~~~~~~~~~-~~~~~~~~-----k~--~~~~~~~~ilG 399 (455)
T 2yqu_A 369 P--------YSASGRARA-MGETEGFI-----KV--LAHAKTDRILG 399 (455)
T ss_dssp E--------GGGCHHHHH-HTCCCCEE-----EE--EEETTTCBEEE
T ss_pred E--------cccchHHHh-cCCCcEEE-----EE--EEECCCCEEEE
Confidence 1 111122222 24333334 66 67677899999
No 104
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=94.29 E-value=0.0095 Score=64.69 Aligned_cols=64 Identities=8% Similarity=-0.021 Sum_probs=43.7
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhhhhhcc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKAT 159 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~~~~~~ 159 (531)
..|||+|||..- . ...+..|.+|||.+|++++++ ........+..... ...+++||+|..+++.
T Consensus 426 ~~VyA~GD~~~~-~---~~~~~~A~~~g~~aa~~i~~~-~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~ 492 (598)
T 2x8g_A 426 SNVYAIGDINAG-K---PQLTPVAIQAGRYLARRLFAG-ATELTDYSNVATTVFTPLEYGACGLSEEDAIEK 492 (598)
T ss_dssp TTEEECGGGBTT-S---CCCHHHHHHHHHHHHHHHHHC-CCCCCCCTTCCEEECSSSCEEEEECCHHHHHHH
T ss_pred CCEEEEeeecCC-C---CccHHHHHHhHHHHHHHHhcC-CCcccCCCCCcEEEECCCceEEEeCCHHHHHhh
Confidence 469999999643 1 123567899999999999964 33322333333333 5688999999987765
No 105
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.75 E-value=0.025 Score=58.42 Aligned_cols=62 Identities=13% Similarity=-0.061 Sum_probs=51.5
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEA 154 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~ 154 (531)
..|||+|||.+. .+...+.+..|.+|||.+|.+++ |....|++.......+ +..++.|++|.
T Consensus 258 ~~IyA~GD~a~~-~~~~~~~~~~A~~qg~~aa~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 322 (385)
T 3klj_A 258 KDIYACGDVAEF-YGKNPGLINIANKQGEVAGLNAC-GEDASYSEIIPSPILKVSGISIISCGDIEN 322 (385)
T ss_dssp TTEEECGGGEEE-TTBCCCCHHHHHHHHHHHHHHHT-TCCCCCCCCCCCCEEEETTEEEEEESCCTT
T ss_pred CCEEEEEeeEec-CCCcccHHHHHHHHHHHHHHHhc-CCCcCCCCCCCcEEEEeCCCcEEEEcCCCC
Confidence 469999999987 66666778999999999999999 4777788876766665 67889999886
No 106
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.98 E-value=0.034 Score=56.78 Aligned_cols=62 Identities=8% Similarity=-0.090 Sum_probs=47.8
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEA 154 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e~ 154 (531)
..|||+|||... .....+.+..|.+|||.+|+++.| ....|++.......+ ...++.|++|.
T Consensus 261 ~~IyA~GD~a~~-~~~~~~~~~~A~~qg~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~ 325 (367)
T 1xhc_A 261 KDVYAIGDCAEY-SGIIAGTAKAAMEQARVLADILKG-EPRRYNFKFRSTVFKFGKLQIAIIGNTKG 325 (367)
T ss_dssp TTEEECGGGEEB-TTBCCCSHHHHHHHHHHHHHHHTT-CCCCCCSSCCEEEEEETTEEEEEEECCSS
T ss_pred CCEEEeEeeeec-CCCCccHHHHHHHHHHHHHHHhcC-CCccCCCCCCceEEEECCceEEEECCCCC
Confidence 469999999876 333345678999999999999994 667788765554333 56889999998
No 107
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=86.08 E-value=0.27 Score=50.63 Aligned_cols=58 Identities=7% Similarity=0.017 Sum_probs=43.7
Q ss_pred cccccccchhhhhhhhhcc------ccchhhhhhhHHHHHhhccccc-cccCcccccccc---ccccccch
Q 009581 91 SSMIKGENAVKSSLDTITS------SLTSIKKSTSEAVDNVVSRVFS-SIDQTGGSAGSK---LTNFSTDL 151 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~------~~~~a~k~~r~~~d~~~~g~~~-~~~~~~~~~~~~---~~~~~tgl 151 (531)
..|||+|||... .+..+| .+..|.+|||.+|.++.| ... .|.+ +.....+ +..+++|+
T Consensus 266 ~~IyA~GD~~~~-~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g-~~~~~~~~-~p~~~~~~~~~~~~~~G~ 333 (408)
T 2gqw_A 266 PDVYALGDVTRQ-RNPLSGRFERIETWSNAQNQGIAVARHLVD-PTAPGYAE-LPWYWSDQGALRIQVAGL 333 (408)
T ss_dssp TTEEECGGGEEE-EETTTTEEECCCCHHHHHHHHHHHHHHHHC-TTSCCCCC-CCEEEEEETTEEEEEEEC
T ss_pred CCEEEEEEEEEe-cCccCCceeeccHHHHHHHHHHHHHHHhcC-CCCCcCCC-CCeEEEEECCceEEEECC
Confidence 469999999998 666666 357899999999999995 555 5655 3444444 67788888
No 108
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=84.84 E-value=0.33 Score=50.49 Aligned_cols=60 Identities=5% Similarity=-0.032 Sum_probs=42.3
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccCcccccccc---ccccccchhh
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKE 153 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~~~~~~~~~---~~~~~tgl~e 153 (531)
..|||+|||... .+..+|. +..|.+|||.+|.+++| ....|++ +.....+ +..+++|+++
T Consensus 277 ~~IyA~GD~~~~-~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g-~~~~~~~-~p~~~~~~~~~~~~~~G~~~ 345 (431)
T 1q1r_A 277 PLIMAVGDCARF-HSQLYDRWVRIESVPNALEQARKIAAILCG-KVPRDEA-APWFWSDQYEIGLKMVGLSE 345 (431)
T ss_dssp TTEEECGGGEEE-EETTTTEEEECCSHHHHHHHHHHHHHHHTT-CCCCCCC-CCEEEEEETTEEEEEEECCT
T ss_pred CCEEEEEeEEEE-ccccCCceEeeCHHHHHHHHHHHHHHHhcC-CCCCCCC-CCeEEEEECCceEEEEeCCC
Confidence 369999999987 6655553 57899999999999995 5555654 3333222 4556677665
No 109
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=77.87 E-value=7.5 Score=33.96 Aligned_cols=28 Identities=29% Similarity=0.411 Sum_probs=19.7
Q ss_pred CCcEEEEEeCCC-cHHHHH--HHHHHHccCC
Q 009581 353 DRSKVIVMDADG-TRSKGI--ARSLRKLGVM 380 (531)
Q Consensus 353 kd~~IVVyC~sG-~RS~~A--A~~L~~lGf~ 380 (531)
.+.+|+|+|..| .||..+ +.++...|.+
T Consensus 89 ~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 89 MGGKVLVHGNAGISRSAAFVIAYIMETFGMK 119 (154)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEcCCCCChHHHHHHHHHHHHcCCC
Confidence 568999999999 487643 4455556653
No 110
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=76.27 E-value=5.6 Score=34.57 Aligned_cols=27 Identities=33% Similarity=0.473 Sum_probs=20.1
Q ss_pred CCcEEEEEeCCC-cHHHH--HHHHHHHccC
Q 009581 353 DRSKVIVMDADG-TRSKG--IARSLRKLGV 379 (531)
Q Consensus 353 kd~~IVVyC~sG-~RS~~--AA~~L~~lGf 379 (531)
.+.+|+|+|..| .||.. +++.+...|+
T Consensus 80 ~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~ 109 (145)
T 2nt2_A 80 HGSKCLVHSKMGVSRSASTVIAYAMKEYGW 109 (145)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 568999999999 58854 4566666665
No 111
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=76.12 E-value=3.1 Score=36.29 Aligned_cols=28 Identities=21% Similarity=0.040 Sum_probs=19.7
Q ss_pred CCcEEEEEeCCCc-HHHHH--HHHHHHccCC
Q 009581 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGVM 380 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A--A~~L~~lGf~ 380 (531)
.+.+|+|+|..|. ||..+ +..+...|++
T Consensus 88 ~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 88 LGQCVYVHCKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp TTCEEEEESSSSSSHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 4679999999998 88654 3445556653
No 112
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=75.93 E-value=1.2 Score=45.59 Aligned_cols=43 Identities=2% Similarity=0.091 Sum_probs=34.1
Q ss_pred cccccccchhhhhhhhhc-cc------cchhhhhhhHHHHHhhccccccccC
Q 009581 91 SSMIKGENAVKSSLDTIT-SS------LTSIKKSTSEAVDNVVSRVFSSIDQ 135 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t-~~------~~~a~k~~r~~~d~~~~g~~~~~~~ 135 (531)
..|||+|||... .+.++ |. ...|..||+.+|.+++| ....|+.
T Consensus 278 ~~iyA~GD~a~~-~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g-~~~~~~~ 327 (415)
T 3lxd_A 278 TDVYAIGDCAAH-ANDFADGAVIRLESVQNANDMATAAAKDICG-APVPYKA 327 (415)
T ss_dssp TTEEECGGGEEE-ECGGGTTCEECCCSHHHHHHHHHHHHHHHTT-CCCCCCC
T ss_pred CCEEEEEeeeee-cCcccCCcceeechHHHHHHHHHHHHHHhcC-CCCCCCC
Confidence 469999999988 66665 53 67899999999999995 5555554
No 113
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=74.94 E-value=4.3 Score=35.45 Aligned_cols=28 Identities=25% Similarity=0.209 Sum_probs=20.0
Q ss_pred CCcEEEEEeCCC-cHHHH--HHHHHHHccCC
Q 009581 353 DRSKVIVMDADG-TRSKG--IARSLRKLGVM 380 (531)
Q Consensus 353 kd~~IVVyC~sG-~RS~~--AA~~L~~lGf~ 380 (531)
.+.+|+|+|..| .||.. ++..+...|++
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 468999999999 48763 34556666663
No 114
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=74.58 E-value=1.3 Score=44.92 Aligned_cols=42 Identities=2% Similarity=-0.054 Sum_probs=30.4
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhcccccccc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSID 134 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~g~~~~~~ 134 (531)
..|||+|||... .......+.+|.+|||.+|++++| ....++
T Consensus 270 ~~IyA~GD~~~~-~~~~~~~~~~a~~~g~~~a~~i~g-~~~~~~ 311 (384)
T 2v3a_A 270 ANIYALGDCAEV-DGLNLLYVMPLMACARALAQTLAG-NPSQVA 311 (384)
T ss_dssp TTEEECGGGEEE-TTBCCCSHHHHHHHHHHHHHHHTT-CCCCCC
T ss_pred CCEEEeeeeeeE-CCCCcchHHHHHHHHHHHHHHhcC-CCccCC
Confidence 369999999975 222223366789999999999995 555554
No 115
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=72.61 E-value=9.8 Score=32.76 Aligned_cols=27 Identities=26% Similarity=0.203 Sum_probs=18.4
Q ss_pred CCcEEEEEeCCCc-HHHH-HH-HHHHHccC
Q 009581 353 DRSKVIVMDADGT-RSKG-IA-RSLRKLGV 379 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~-AA-~~L~~lGf 379 (531)
.+.+|+|+|..|. ||.. ++ ..+...|+
T Consensus 87 ~~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~ 116 (150)
T 4erc_A 87 RGEAVGVHCALGFGRTGTMLACYLVKERGL 116 (150)
T ss_dssp TTCEEEEECSSSSHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 5689999999997 7763 33 33444565
No 116
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=72.31 E-value=1.3 Score=46.82 Aligned_cols=43 Identities=14% Similarity=-0.059 Sum_probs=33.6
Q ss_pred ccccccccchhhhhhhhhccc-----cchhhhhhhHHHHHhhcccccccc
Q 009581 90 SSSMIKGENAVKSSLDTITSS-----LTSIKKSTSEAVDNVVSRVFSSID 134 (531)
Q Consensus 90 ~~~i~a~gda~~~~~~~~t~~-----~~~a~k~~r~~~d~~~~g~~~~~~ 134 (531)
...|||+|||... .+..+|. ...|..|||.||.+++ |....|+
T Consensus 310 ~~~IyA~GD~a~~-~~~~~g~~~~~~~~~A~~qg~~aa~ni~-g~~~~~~ 357 (493)
T 1m6i_A 310 RSNIWVAGDAACF-YDIKLGRRRVEHHDHAVVSGRLAGENMT-GAAKPYW 357 (493)
T ss_dssp ETTEEECGGGEEE-EETTTEEECCCCHHHHHHHHHHHHHHHT-SCCCCCC
T ss_pred CCCeeEeeeeEec-cCcccCccccchHHHHHHHHHHHHHHhc-CCCCCcC
Confidence 3679999999987 6655543 3479999999999999 4666666
No 117
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=72.16 E-value=1.6 Score=44.87 Aligned_cols=42 Identities=5% Similarity=-0.002 Sum_probs=32.8
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccC
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQ 135 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~ 135 (531)
..||++|||... .+.. |. ...|..|||.+|.+++| ....|+.
T Consensus 268 ~~IyA~GD~a~~-~~~~-g~~~~~~~~~~A~~qg~~aa~~i~g-~~~~~~~ 315 (410)
T 3ef6_A 268 KGVFAVGDVASW-PLRA-GGRRSLETYMNAQRQAAAVAAAILG-KNVSAPQ 315 (410)
T ss_dssp TTEEECGGGEEE-EBTT-SSEECCCCHHHHHHHHHHHHHHHTT-CCCCCCB
T ss_pred CCEEEEEcceec-cCCC-CCeeeechHHHHHHHHHHHHHHHcC-CCCCCCC
Confidence 469999999987 5544 43 67899999999999995 5555554
No 118
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=71.88 E-value=1.5 Score=44.82 Aligned_cols=43 Identities=2% Similarity=-0.093 Sum_probs=33.9
Q ss_pred cccccccchhhhhhhhhccc------cchhhhhhhHHHHHhhccccccccC
Q 009581 91 SSMIKGENAVKSSLDTITSS------LTSIKKSTSEAVDNVVSRVFSSIDQ 135 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~------~~~a~k~~r~~~d~~~~g~~~~~~~ 135 (531)
..||++|||... .+..+|. ...|..||+.+|.+++| ....|+.
T Consensus 268 ~~iya~GD~a~~-~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g-~~~~~~~ 316 (404)
T 3fg2_P 268 PHISAIGDCALF-ESVRFGETMRVESVQNATDQARCVAARLTG-DAKPYDG 316 (404)
T ss_dssp TTEEECGGGEEE-EETTTTEEECCCSHHHHHHHHHHHHHHTTT-CCCCCCC
T ss_pred CCEEEeecceee-cCccCCceeeehHHHHHHHHHHHHHHHhCC-CCCCCCC
Confidence 469999999988 6656554 67899999999999994 5555554
No 119
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=68.91 E-value=3.2 Score=36.32 Aligned_cols=28 Identities=11% Similarity=0.058 Sum_probs=19.3
Q ss_pred CCcEEEEEeCCCc-HHHHHH-HHHHHccCC
Q 009581 353 DRSKVIVMDADGT-RSKGIA-RSLRKLGVM 380 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~AA-~~L~~lGf~ 380 (531)
.+.+|+++|..|. |+..++ ..|...|++
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 4679999999986 776544 344555653
No 120
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=68.88 E-value=15 Score=32.51 Aligned_cols=27 Identities=30% Similarity=0.425 Sum_probs=20.0
Q ss_pred CCcEEEEEeCCCc-HHHHH--HHHHHHccC
Q 009581 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A--A~~L~~lGf 379 (531)
.+.+|+|+|..|. ||..+ +++++..|+
T Consensus 88 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 117 (164)
T 2hcm_A 88 DGGSCLVYCKNGRSRSAAVCTAYLMRHRGH 117 (164)
T ss_dssp TTCEEEEEESSSSHHHHHHHHHHHHHHSCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 5689999999994 87643 456666675
No 121
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=67.61 E-value=0.85 Score=42.41 Aligned_cols=27 Identities=11% Similarity=0.004 Sum_probs=22.5
Q ss_pred cEEEEeCChhhhhhcCCccccccccccccccCcccccch
Q 009581 287 AVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS 325 (531)
Q Consensus 287 avLIDVRs~eEf~~GHIPGAi~a~~~~~~nIPl~eL~~~ 325 (531)
.+|||||++.||. |||+ |||...+.-+
T Consensus 122 ~~liDvRe~~E~~----pgA~--------~iprg~lE~~ 148 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSL--------SIPQLRVEVE 148 (168)
T ss_dssp TEEEEEEEEEEEE----ETTE--------EEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCE--------EcChhHHHHh
Confidence 4999999999999 9999 9997655433
No 122
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=61.49 E-value=29 Score=34.51 Aligned_cols=27 Identities=22% Similarity=0.213 Sum_probs=20.7
Q ss_pred CcEEEEEeCCCc-HH-HHHHHHHHHccCC
Q 009581 354 RSKVIVMDADGT-RS-KGIARSLRKLGVM 380 (531)
Q Consensus 354 d~~IVVyC~sG~-RS-~~AA~~L~~lGf~ 380 (531)
+.|++++|..|. |. ..++-+|..+|.+
T Consensus 173 ~~pvl~HC~aGkDRTG~~~alll~~~g~~ 201 (296)
T 1ywf_A 173 GRPVLTHCFAGKDRTGFVVALVLEAVGLD 201 (296)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHTTCC
T ss_pred CCCEEEECCCCCccccHHHHHHHHHcCCC
Confidence 789999999886 55 4455667788885
No 123
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=61.00 E-value=28 Score=30.07 Aligned_cols=28 Identities=18% Similarity=0.202 Sum_probs=19.6
Q ss_pred CCcEEEEEeCCCc-HHHH--HHHHHHHccCC
Q 009581 353 DRSKVIVMDADGT-RSKG--IARSLRKLGVM 380 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~lGf~ 380 (531)
.+.+|+|+|..|. ||.. +++++...|++
T Consensus 80 ~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~~ 110 (144)
T 3s4e_A 80 KDGVVLVHSNAGVSRAAAIVIGFLMNSEQTS 110 (144)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEEcCCCCchHHHHHHHHHHHHcCCC
Confidence 5678999999987 7644 34555656663
No 124
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=59.82 E-value=3.3 Score=40.00 Aligned_cols=38 Identities=11% Similarity=0.220 Sum_probs=27.1
Q ss_pred hhhhccc---cccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 86 NESFSSS---MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 86 ~~~~~~~---i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
++.+-|| |||+|||....+. .+..|..|||.||.+|..
T Consensus 263 d~~~~Ts~pgIyA~GDv~~~~~~----~~~~A~~~G~~AA~~i~~ 303 (312)
T 4gcm_A 263 KDDMTTSVPGIFAAGDVRDKGLR----QIVTATGDGSIAAQSAAE 303 (312)
T ss_dssp CTTSBCSSTTEEECSTTBSCSCC----SHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCCCEEEEeecCCCcch----HHHHHHHHHHHHHHHHHH
Confidence 3444444 9999999754222 255789999999999874
No 125
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=59.03 E-value=16 Score=33.76 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=19.5
Q ss_pred CCcEEEEEeCCCc-HHHH--HHHHHHHccC
Q 009581 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~lGf 379 (531)
.+.+|+|+|..|. ||.. +|++++..|+
T Consensus 116 ~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~ 145 (182)
T 2j16_A 116 KREKILIHAQCGLSRSATLIIAYIMKYHNL 145 (182)
T ss_dssp TTCCEEEEESSCCSHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 5788999999985 7754 4555666665
No 126
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=58.10 E-value=15 Score=32.62 Aligned_cols=27 Identities=22% Similarity=0.156 Sum_probs=19.2
Q ss_pred CCcEEEEEeCCCc-HHHH--HHHHHHHccC
Q 009581 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~lGf 379 (531)
.+.+|+|+|..|. ||.. ++.++...|+
T Consensus 82 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 111 (165)
T 1wrm_A 82 RGESCLVHCLAGVSRSVTLVIAYIMTVTDF 111 (165)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSSC
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 5789999999994 8766 3445555554
No 127
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=57.53 E-value=18 Score=31.80 Aligned_cols=28 Identities=21% Similarity=0.272 Sum_probs=19.8
Q ss_pred CCcEEEEEeCCC-cHHHH--HHHHHHHccCC
Q 009581 353 DRSKVIVMDADG-TRSKG--IARSLRKLGVM 380 (531)
Q Consensus 353 kd~~IVVyC~sG-~RS~~--AA~~L~~lGf~ 380 (531)
.+.+|+|+|..| .||.. ++..+...|++
T Consensus 83 ~~~~VlVHC~aG~~RSg~~~~aylm~~~~~~ 113 (160)
T 1yz4_A 83 NGGNCLVHSFAGISRSTTIVTAYVMTVTGLG 113 (160)
T ss_dssp TTCCEEEEETTSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 467999999999 58864 34555666663
No 128
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=57.43 E-value=29 Score=32.87 Aligned_cols=27 Identities=26% Similarity=0.327 Sum_probs=20.3
Q ss_pred CCcEEEEEeCCCc-HHHH--HHHHHHHccC
Q 009581 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~lGf 379 (531)
.+.+|+|+|..|. ||.. ++++++..|+
T Consensus 82 ~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~ 111 (211)
T 2g6z_A 82 KGGKVLVHSEAGISRSPTICMAYLMKTKQF 111 (211)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCCcHHHHHHHHHHHHcCC
Confidence 5789999999995 8753 4566666776
No 129
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=57.31 E-value=4.3 Score=36.00 Aligned_cols=33 Identities=9% Similarity=-0.041 Sum_probs=27.2
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... .+ ..+..|..||+.+|.++.+
T Consensus 136 ~~i~a~GD~~~~-~~---~~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 136 PRVYAAGVARGK-VP---GHAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp TTEEECGGGGTC-CS---CCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCc-ch---hhHHHHHHhHHHHHHHHHH
Confidence 469999999887 32 2577899999999999985
No 130
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=55.96 E-value=24 Score=31.70 Aligned_cols=27 Identities=26% Similarity=0.282 Sum_probs=19.5
Q ss_pred CcEEEEEeCCCc-HHHH--HHHHHHHccCC
Q 009581 354 RSKVIVMDADGT-RSKG--IARSLRKLGVM 380 (531)
Q Consensus 354 d~~IVVyC~sG~-RS~~--AA~~L~~lGf~ 380 (531)
+.+|+|+|..|. ||.. ++..+...|++
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~~ 144 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKMD 144 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCCC
Confidence 679999999986 7765 34455666763
No 131
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=55.92 E-value=4.5 Score=40.77 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=26.2
Q ss_pred ccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 92 ~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
.|||+|||... .. ....+..|++||+.+|+||..
T Consensus 288 ~VfAiGDva~~-~~-~pk~a~~A~~qa~v~A~ni~~ 321 (401)
T 3vrd_B 288 GIHVIGDACNA-AP-MPKSAYSANSQAKVAAAAVVA 321 (401)
T ss_dssp TEEECGGGBCC-TT-SCBSHHHHHHHHHHHHHHHHH
T ss_pred CEEEecccccC-CC-CCchHHHHHHHHHHHHHHHHH
Confidence 59999999854 22 123478899999999999873
No 132
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=54.94 E-value=23 Score=30.44 Aligned_cols=28 Identities=32% Similarity=0.341 Sum_probs=19.5
Q ss_pred CCcEEEEEeCCCc-HHHH--HHHHHHHccCC
Q 009581 353 DRSKVIVMDADGT-RSKG--IARSLRKLGVM 380 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~lGf~ 380 (531)
.+.+|+|+|..|. ||.. +++.+...|++
T Consensus 80 ~~~~VlVHC~~G~~RS~~~~~aylm~~~~~~ 110 (144)
T 3ezz_A 80 CRGRVLVHSQAGISRSATICLAYLMMKKRVR 110 (144)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCeEEEECCCCCChhHHHHHHHHHHHcCCC
Confidence 4679999999986 7753 34455556663
No 133
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=53.86 E-value=28 Score=29.69 Aligned_cols=18 Identities=28% Similarity=0.106 Sum_probs=14.1
Q ss_pred CCcEEEEEeCCCc-HHHHH
Q 009581 353 DRSKVIVMDADGT-RSKGI 370 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A 370 (531)
.+.+|+|+|..|. ||..+
T Consensus 88 ~~~~vlVHC~aG~~Rsg~~ 106 (151)
T 2img_A 88 RGEAVGVHCALGFGRTGTM 106 (151)
T ss_dssp TTCEEEEECSSSSSHHHHH
T ss_pred CCCcEEEECCCCCChHHHH
Confidence 5789999999886 76553
No 134
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=52.53 E-value=4.6 Score=41.64 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=26.1
Q ss_pred ccccccchhhhhhhh--------hccccchhhhhhhHHHHHhhc
Q 009581 92 SMIKGENAVKSSLDT--------ITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 92 ~i~a~gda~~~~~~~--------~t~~~~~a~k~~r~~~d~~~~ 127 (531)
.|||+|||... -+. .-..+..|.+||+.+|+|+..
T Consensus 288 ~IfAiGD~a~~-p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 288 NIFGVGVVTAI-PPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TEEECSTTBCC-CCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEeccEEec-CCcccCcCcCccchHHHHHHHHHHHHHHHHHH
Confidence 59999999865 221 112266899999999999984
No 135
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=50.80 E-value=38 Score=30.11 Aligned_cols=28 Identities=14% Similarity=0.268 Sum_probs=20.2
Q ss_pred CCcEEEEEeCCCc-HHHH--HHHHHHHccCC
Q 009581 353 DRSKVIVMDADGT-RSKG--IARSLRKLGVM 380 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~lGf~ 380 (531)
.+.+|+|+|..|. ||.. ++++++..|++
T Consensus 86 ~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 86 RKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp TTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred cCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 4679999999987 7643 45566667764
No 136
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=45.85 E-value=33 Score=33.92 Aligned_cols=45 Identities=18% Similarity=0.164 Sum_probs=33.2
Q ss_pred cEEEEEeCCCc---HHHHHHHHHHHccCCceEEe-cc---------hHHHHHHcCCcee
Q 009581 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QG---------GFQSWVKEGLRIK 400 (531)
Q Consensus 355 ~~IVVyC~sG~---RS~~AA~~L~~lGf~nV~~L-~G---------G~~aW~~aGLPV~ 400 (531)
++|+|+|..|+ ....+|+.|...||+ |.++ -+ -+..|++.|.++.
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~~~~~~~~~~~~~~~~~~~~~g~~~~ 137 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIYYPKRPNKPLFTGLVTQCQKMDIPFL 137 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEECCSCCSSHHHHHHHHHHHHTTCCBC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEEEeCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999998776 678899999999994 6543 22 2456777777764
No 137
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=45.41 E-value=49 Score=30.00 Aligned_cols=28 Identities=21% Similarity=0.198 Sum_probs=18.1
Q ss_pred CCCcEEEEEeCCCc-HHHH-HHHHHHHccC
Q 009581 352 QDRSKVIVMDADGT-RSKG-IARSLRKLGV 379 (531)
Q Consensus 352 ~kd~~IVVyC~sG~-RS~~-AA~~L~~lGf 379 (531)
.++.+|+|+|..|. |+.. ++..|...|+
T Consensus 115 ~~~~~VlVHC~aG~gRSg~~va~~L~~~g~ 144 (189)
T 3rz2_A 115 EPGCCIAVHCVAGLGRAPVLVALALIEGGM 144 (189)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHTTTC
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHHHHcCC
Confidence 36789999999886 6654 3333444444
No 138
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=44.17 E-value=25 Score=33.20 Aligned_cols=27 Identities=30% Similarity=0.326 Sum_probs=19.7
Q ss_pred CCcEEEEEeCCCc-HHHH--HHHHHHHccC
Q 009581 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~lGf 379 (531)
.+.+|+|+|..|. ||.. +++++...|+
T Consensus 138 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 167 (219)
T 2y96_A 138 DHSKILVHCVMGRSRSATLVLAYLMIHKDM 167 (219)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 5679999999995 7764 4455666665
No 139
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=43.99 E-value=39 Score=30.94 Aligned_cols=28 Identities=29% Similarity=0.288 Sum_probs=20.3
Q ss_pred CCcEEEEEeCCC-cHHHH--HHHHHHHccCC
Q 009581 353 DRSKVIVMDADG-TRSKG--IARSLRKLGVM 380 (531)
Q Consensus 353 kd~~IVVyC~sG-~RS~~--AA~~L~~lGf~ 380 (531)
.+.+|+|+|..| .||.. +++++...|++
T Consensus 102 ~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~s 132 (190)
T 2wgp_A 102 KHGATLVHCAAGVSRSATLCIAYLMKFHNVC 132 (190)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCCEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 467899999998 48763 45666666763
No 140
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=43.49 E-value=43 Score=30.94 Aligned_cols=24 Identities=25% Similarity=0.173 Sum_probs=16.5
Q ss_pred CCcEEEEEeCCCc-HHHHH-HHHHHH
Q 009581 353 DRSKVIVMDADGT-RSKGI-ARSLRK 376 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A-A~~L~~ 376 (531)
.+.+|+|+|..|. |+..+ +..|..
T Consensus 132 ~~~~VlVHC~aG~gRTg~~~a~~L~~ 157 (212)
T 1fpz_A 132 NYRKTLIHSYGGLGRSCLVAACLLLY 157 (212)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 5679999999886 76543 344443
No 141
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=43.42 E-value=9.7 Score=35.79 Aligned_cols=31 Identities=6% Similarity=0.013 Sum_probs=26.2
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVV 126 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~ 126 (531)
..||++|||... ...+..|..||+.||.++.
T Consensus 258 ~~vya~GD~~~~-----~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 258 RGIFACGDVARP-----AGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp TTEEECSGGGCT-----TCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeecCCc-----hHHHHHHHHhHHHHHHHHH
Confidence 459999999874 3568889999999999886
No 142
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=42.91 E-value=41 Score=32.70 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=33.7
Q ss_pred cEEEEEeCCCc---HHHHHHHHHHHccCCceEEe-cc----------hHHHHHHcCCcee
Q 009581 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QG----------GFQSWVKEGLRIK 400 (531)
Q Consensus 355 ~~IVVyC~sG~---RS~~AA~~L~~lGf~nV~~L-~G----------G~~aW~~aGLPV~ 400 (531)
++|+|+|..|+ ....+|+.|...||+ |.++ -+ -+..|+..|.++.
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999998776 678899999999995 6543 22 2456777787765
No 143
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=41.60 E-value=22 Score=32.26 Aligned_cols=37 Identities=14% Similarity=0.128 Sum_probs=29.4
Q ss_pred CCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHH
Q 009581 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (531)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~ 390 (531)
++.+++|+|++-..+...+..|...|+ .+..+.|++.
T Consensus 45 ~~~k~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~~ 81 (185)
T 2jgn_A 45 KDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 81 (185)
T ss_dssp CCSCEEEEESCHHHHHHHHHHHHHTTC-CEEEEC----
T ss_pred CCCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEeCCCC
Confidence 567899999998888899999999999 5888999875
No 144
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=40.73 E-value=10 Score=36.25 Aligned_cols=35 Identities=11% Similarity=0.093 Sum_probs=27.1
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... +.-...+..|..||+.+|.++..
T Consensus 278 ~~vya~GD~~~~--~~~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 278 EGFFAAGDICTY--EGKVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp TTEEECGGGEEC--TTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEccceecC--CCCcceEeeehhhHHHHHHHHHH
Confidence 459999999853 22234588899999999999884
No 145
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=40.08 E-value=9.8 Score=40.11 Aligned_cols=31 Identities=6% Similarity=-0.072 Sum_probs=26.9
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... ..+.+|++|||++|+++.+
T Consensus 344 ~~vya~GD~~~~------~~~~~A~~~g~~aa~~i~~ 374 (493)
T 1y56_A 344 DGIYVAGSAVSI------KPHYANYLEGKLVGAYILK 374 (493)
T ss_dssp TTEEECSTTTCC------CCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeccCCc------cCHHHHHHHHHHHHHHHHH
Confidence 469999999875 4578999999999999985
No 146
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=39.97 E-value=8.9 Score=36.67 Aligned_cols=32 Identities=6% Similarity=-0.070 Sum_probs=23.5
Q ss_pred ccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 92 ~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
.|||+|||...... ++..|..+|+.||-++.-
T Consensus 278 gIyA~GDv~~~~~~----~~~~A~~~G~~AA~~~~~ 309 (314)
T 4a5l_A 278 GVFACGDVCDRVYR----QAIVAAGSGCMAALSCEK 309 (314)
T ss_dssp TEEECSTTTCSSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeccCCcch----HHHHHHHHHHHHHHHHHH
Confidence 49999999865221 345688899999988763
No 147
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=39.55 E-value=29 Score=33.98 Aligned_cols=45 Identities=13% Similarity=0.079 Sum_probs=31.6
Q ss_pred cEEEEEeCCCc---HHHHHHHHHHHccCCceEEe-cch----------HHHHHHcCCcee
Q 009581 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QGG----------FQSWVKEGLRIK 400 (531)
Q Consensus 355 ~~IVVyC~sG~---RS~~AA~~L~~lGf~nV~~L-~GG----------~~aW~~aGLPV~ 400 (531)
.+|+|+|..|+ ....+|+.|...||+ |.++ -+. ++.|+..|.++.
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~a~~~~~~~~~~g~~~~ 144 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILFLPNFVKMLESITNELSLFSKTQGQQV 144 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEECCBCSSCCHHHHHHHHHHTTSSCEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEecCCCCCHHHHHHHHHHHHcCCCcc
Confidence 58999998776 678899999999995 5543 221 345666666553
No 148
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=38.56 E-value=93 Score=26.75 Aligned_cols=27 Identities=22% Similarity=0.170 Sum_probs=17.4
Q ss_pred CCcEEEEEeCCCc-HHHH-HHHHHHHc-cC
Q 009581 353 DRSKVIVMDADGT-RSKG-IARSLRKL-GV 379 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~-AA~~L~~l-Gf 379 (531)
++.+|+|+|..|. |+.. ++..|... |+
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~ 137 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVEYGNV 137 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 4789999999886 6644 33344433 54
No 149
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=38.21 E-value=13 Score=34.73 Aligned_cols=33 Identities=3% Similarity=0.047 Sum_probs=27.4
Q ss_pred hccccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 89 FSSSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 89 ~~~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
--.-||++|||. . .+....+..|||.+|++++.
T Consensus 197 ~~p~iya~G~~a-~-----~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 197 RLEGLYAVGLCV-R-----EGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp TSBSEEECGGGT-S-----CCCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeeeecc-c-----CccHHHHHHHHHHHHHHHHh
Confidence 446799999999 4 34777899999999999873
No 150
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=37.25 E-value=32 Score=34.57 Aligned_cols=45 Identities=13% Similarity=0.079 Sum_probs=32.2
Q ss_pred cEEEEEeCCCc---HHHHHHHHHHHccCCceEEe-cch----------HHHHHHcCCcee
Q 009581 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QGG----------FQSWVKEGLRIK 400 (531)
Q Consensus 355 ~~IVVyC~sG~---RS~~AA~~L~~lGf~nV~~L-~GG----------~~aW~~aGLPV~ 400 (531)
.+|+|+|..|+ .+..+|+.|...||+ |.++ -+. +..|+..|.++.
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~~~~~~~~~~~a~~~~~~~~~~g~~~~ 191 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILFLPNFVKMLESITNELSLFSKTQGQQV 191 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEECCCCSSCCHHHHHHHHHHHTSSCEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEEEecCCCCCHHHHHHHHHHHHcCCccc
Confidence 58999998775 678899999999994 5543 221 346666676654
No 151
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=37.04 E-value=13 Score=35.20 Aligned_cols=35 Identities=3% Similarity=-0.015 Sum_probs=27.4
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... . .....+..|..||+.+|.++..
T Consensus 280 ~~vya~GD~~~~-~-~~~~~~~~A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 280 PGVFAAGDCTSA-W-LGFRQVITAVAQGAVAATSAYR 314 (323)
T ss_dssp TTEEECSTTBST-T-TTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEcceecCC-C-CcccceeehhhHHHHHHHHHHH
Confidence 459999999875 1 2235588999999999998873
No 152
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=36.66 E-value=13 Score=35.57 Aligned_cols=33 Identities=9% Similarity=0.070 Sum_probs=26.6
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... . ...+..|..||+.+|.++..
T Consensus 274 ~~vya~GD~~~~-~---~~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 274 QGLFAAGDIRIF-A---PKQVVCAASDGATAALSVIS 306 (311)
T ss_dssp TTEEECSTTBTT-C---CCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEcccccCc-c---hHHHHHHHHhHHHHHHHHHH
Confidence 369999999874 1 24588899999999999873
No 153
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=36.59 E-value=37 Score=36.50 Aligned_cols=47 Identities=19% Similarity=0.249 Sum_probs=35.4
Q ss_pred CCcEEEEEeCCCc---HHHHHHHHHHHccCCceEEe-cch---------HHHHHHcCCcee
Q 009581 353 DRSKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QGG---------FQSWVKEGLRIK 400 (531)
Q Consensus 353 kd~~IVVyC~sG~---RS~~AA~~L~~lGf~nV~~L-~GG---------~~aW~~aGLPV~ 400 (531)
+.++|+|+|..|+ ....+|+.|...||+ |.++ -+. ++.|++.|.++.
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKD-VLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSE-EEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 4578999998776 678899999999995 5433 221 567888898876
No 154
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=36.58 E-value=12 Score=36.59 Aligned_cols=36 Identities=3% Similarity=-0.026 Sum_probs=28.7
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... .+.....+..+..||+.+|.++.+
T Consensus 301 ~~v~a~GD~~~~-~~~~~~~~~~~~~~a~~~a~~l~~ 336 (369)
T 3d1c_A 301 PNIFMIGATVEN-DNAKLCYIYKFRARFAVLAHLLTQ 336 (369)
T ss_dssp TTEEECSTTCCC-SSCCCCSHHHHGGGHHHHHHHHHH
T ss_pred CCeEEecccccc-CCeeEEEEehhhHHHHHHHHHHhc
Confidence 479999999987 444444566788999999999985
No 155
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=35.88 E-value=15 Score=34.82 Aligned_cols=32 Identities=6% Similarity=0.061 Sum_probs=25.9
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhh
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVV 126 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~ 126 (531)
..||++|||... -...+..|..||+.||.++.
T Consensus 277 ~~v~a~GD~~~~----~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 277 AGLFAAGDLRKD----APKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp TTEEECGGGBTT----CCCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCC----chhhhhhHHhhHHHHHHHHH
Confidence 459999999854 13457889999999999887
No 156
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=35.80 E-value=13 Score=35.83 Aligned_cols=33 Identities=6% Similarity=0.018 Sum_probs=26.8
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... . ...+..|.+||+.+|.++..
T Consensus 277 ~~vya~GD~~~~-~---~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 277 PMLFAAGDVSDY-I---YRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp TTEEECSTTTCS-S---CCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCc-c---HHHHHHHHHHHHHHHHHHHH
Confidence 369999999864 1 24578899999999999984
No 157
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=35.29 E-value=13 Score=38.10 Aligned_cols=36 Identities=17% Similarity=0.133 Sum_probs=27.2
Q ss_pred cccccccchhhhhhhh--------hccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDT--------ITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~--------~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... .+. ....+..|.+||+.+|+|+..
T Consensus 298 ~~Ifa~GD~~~~-~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~ 341 (437)
T 3sx6_A 298 ANIFAAGIAIAI-PPVETTPVPTGAPKTGYMIESMVSAAVHNIKA 341 (437)
T ss_dssp TTEEECGGGBCC-CCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEecc-CCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 369999999976 321 122377899999999999984
No 158
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=34.09 E-value=31 Score=30.31 Aligned_cols=37 Identities=16% Similarity=0.292 Sum_probs=31.5
Q ss_pred CCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHH
Q 009581 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (531)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~ 390 (531)
+..+++|||++-..+...+..|...|+ .+..+.|++.
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~~ 70 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGY-PCDKIHGGMI 70 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCCC
Confidence 456899999998888999999999999 4888888863
No 159
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=33.64 E-value=38 Score=29.23 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=19.4
Q ss_pred CCcEEEEEeCCC-cHHHHH--HHHHHHccC
Q 009581 353 DRSKVIVMDADG-TRSKGI--ARSLRKLGV 379 (531)
Q Consensus 353 kd~~IVVyC~sG-~RS~~A--A~~L~~lGf 379 (531)
.+.+|+|+|..| .||..+ ++.+...|+
T Consensus 82 ~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~ 111 (149)
T 1zzw_A 82 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 111 (149)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 568999999999 487653 345555665
No 160
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=33.13 E-value=15 Score=39.07 Aligned_cols=33 Identities=3% Similarity=0.004 Sum_probs=26.8
Q ss_pred ccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 92 ~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
.|||+|||... ..-..+..|.+||+.+|+|+..
T Consensus 366 ~IfAiGD~a~~---~~p~~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 366 NIFAIGDNAFA---GLPPTAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp SEEECGGGEES---SSCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcccCC---CCCCchHHHHHHHHHHHHHHHH
Confidence 69999999865 2334478899999999999983
No 161
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=33.03 E-value=17 Score=34.98 Aligned_cols=33 Identities=3% Similarity=-0.029 Sum_probs=26.5
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||.... ..++..|..||+.||.++..
T Consensus 288 ~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 288 PGVFAAGDVQDKK----YRQAITAAGTGCMAALDAEH 320 (333)
T ss_dssp TTEEECGGGGCSS----CCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeeeccCCC----chhHHHHHHhHHHHHHHHHH
Confidence 4699999998751 34578899999999998873
No 162
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=32.54 E-value=32 Score=30.50 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=31.2
Q ss_pred CCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchH
Q 009581 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (531)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~ 389 (531)
+..+++|||++-..+...+..|...|+ .+..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGH-QVSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 457899999998888899999999999 588888875
No 163
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=32.17 E-value=18 Score=34.82 Aligned_cols=31 Identities=10% Similarity=0.044 Sum_probs=23.1
Q ss_pred ccccccchhhhhhhhhccccchhhhhhhHHHHHhh
Q 009581 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVV 126 (531)
Q Consensus 92 ~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~ 126 (531)
.|||+|||...... ++..|..+|+.||-.|.
T Consensus 266 ~IyA~GDv~~~~~~----~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 266 NIYLAGETTTQGPS----SLIIAASQGNKAAIAIN 296 (304)
T ss_dssp TEEECSHHHHTSCC----CHHHHHHHHHHHHHHHH
T ss_pred CEEEEeccCCCcch----HHHHHHHHHHHHHHHHH
Confidence 49999999865222 35568889999988765
No 164
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=32.03 E-value=19 Score=34.54 Aligned_cols=33 Identities=9% Similarity=-0.030 Sum_probs=26.1
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... --..+..|..||+.||.++..
T Consensus 300 ~~vya~GD~~~~----~~~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 300 PGFFAAGDVQDS----KYRQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp TTEEECGGGGCS----SCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeeccCCC----CccceeeehhhhHHHHHHHHH
Confidence 469999999863 124577899999999998873
No 165
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=31.80 E-value=88 Score=28.63 Aligned_cols=19 Identities=32% Similarity=0.385 Sum_probs=14.4
Q ss_pred CCcEEEEEeCCC-cHHHHHH
Q 009581 353 DRSKVIVMDADG-TRSKGIA 371 (531)
Q Consensus 353 kd~~IVVyC~sG-~RS~~AA 371 (531)
.+.+|+|+|..| .|+..++
T Consensus 124 ~~~~VlVHC~aG~~RSg~~v 143 (195)
T 2q05_A 124 RNEPVLVHCAAGVNRSGAMI 143 (195)
T ss_dssp TTCCEEEECSSSSSHHHHHH
T ss_pred cCCcEEEEcCCCCChHHHHH
Confidence 467999999998 4775543
No 166
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=31.19 E-value=36 Score=30.31 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=31.5
Q ss_pred CCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHH
Q 009581 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (531)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~ 390 (531)
+..+++|||++-..+..++..|...|+ ++..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~~ 66 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNF-PAIAIHRGMP 66 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCC-CEEEEECCCC
Confidence 456899999998888999999999999 4888888753
No 167
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=30.88 E-value=16 Score=37.28 Aligned_cols=36 Identities=8% Similarity=0.059 Sum_probs=27.2
Q ss_pred cccccccchhhhhhhh--------hccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDT--------ITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~--------~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... .+. .-..+..|.+||+.+|+|+..
T Consensus 287 ~~Ifa~GD~~~~-~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 287 KNIFGVGVVTAI-PPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TTEEECSTTBCC-CCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeeecc-CCccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 369999999876 221 123477899999999999884
No 168
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=30.38 E-value=66 Score=29.61 Aligned_cols=47 Identities=30% Similarity=0.443 Sum_probs=35.0
Q ss_pred HHhhhcccCCCcEEEEEeCCCc--HHHHHHHHHHH---ccCCceEEecchHH
Q 009581 344 VIRNLKIVQDRSKVIVMDADGT--RSKGIARSLRK---LGVMRAFLVQGGFQ 390 (531)
Q Consensus 344 gI~~Lk~l~kd~~IVVyC~sG~--RS~~AA~~L~~---lGf~nV~~L~GG~~ 390 (531)
|-.-++.++++..+|+.|-.|. .|...|..|.. .|..++..+-||-.
T Consensus 64 g~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~ 115 (163)
T 4fak_A 64 GQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSN 115 (163)
T ss_dssp HHHHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTT
T ss_pred HHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCC
Confidence 3344556678888999998775 78888887755 58878999998853
No 169
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=29.81 E-value=65 Score=28.73 Aligned_cols=28 Identities=29% Similarity=0.277 Sum_probs=18.6
Q ss_pred CCcEEEEEeCCCc-HHHH--HHHHHHHccCC
Q 009581 353 DRSKVIVMDADGT-RSKG--IARSLRKLGVM 380 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~lGf~ 380 (531)
.+.+|+|+|..|. ||.. ++..+...|+.
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 3678999999884 7754 34445555553
No 170
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=29.76 E-value=43 Score=29.29 Aligned_cols=37 Identities=5% Similarity=0.130 Sum_probs=31.4
Q ss_pred CCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHH
Q 009581 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (531)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~ 390 (531)
+..+++|+|++-..+...+..|...|+ .+..+.|++.
T Consensus 29 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 65 (165)
T 1fuk_A 29 SVTQAVIFCNTRRKVEELTTKLRNDKF-TVSAIYSDLP 65 (165)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-CEEEEECCCC
Confidence 456899999998888999999999999 5888888753
No 171
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=29.12 E-value=21 Score=34.34 Aligned_cols=33 Identities=9% Similarity=0.052 Sum_probs=26.3
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... . ...+..|..||+.||.++..
T Consensus 281 ~~vya~GD~~~~-~---~~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 281 PGVYAAGDVTSG-N---FAQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp TTEEECSTTBTT-C---CCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCc-c---hhhHHHHHHHHHHHHHHHHH
Confidence 369999999875 1 23477899999999999874
No 172
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=28.67 E-value=23 Score=33.83 Aligned_cols=33 Identities=3% Similarity=0.017 Sum_probs=26.5
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... . ..++..|..+|+.||.++..
T Consensus 279 ~~vya~GD~~~~-~---~~~~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 279 PGVFAAGDVMDH-I---YRQAITSAGTGCMAALDAER 311 (320)
T ss_dssp TTEEECGGGGCS-S---SCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEcccccCC-c---chhhhhhhccHHHHHHHHHH
Confidence 469999999875 1 24578899999999998873
No 173
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=28.65 E-value=20 Score=34.17 Aligned_cols=33 Identities=3% Similarity=-0.004 Sum_probs=26.3
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... . ...+..|..||+.+|.++..
T Consensus 270 ~~vya~GD~~~~-~---~~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 270 KGVFAAGDCTTV-P---YKQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp TTEEECSTTBSC-S---SCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCC-c---chhhhhhHhhHHHHHHHHHH
Confidence 469999999876 2 13567889999999998874
No 174
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=28.44 E-value=96 Score=30.62 Aligned_cols=27 Identities=15% Similarity=0.162 Sum_probs=18.6
Q ss_pred CcEEEEEeCCCc-HHHH--HHHHHHHccCC
Q 009581 354 RSKVIVMDADGT-RSKG--IARSLRKLGVM 380 (531)
Q Consensus 354 d~~IVVyC~sG~-RS~~--AA~~L~~lGf~ 380 (531)
+.+|+|+|..|. ||.. ++.++...|+.
T Consensus 106 g~~VLVHC~aG~sRS~tvv~ayLm~~~g~s 135 (294)
T 3nme_A 106 GGVTYVHSTAGMGRAPAVALTYMFWVQGYK 135 (294)
T ss_dssp CSEEEEECSSSSSHHHHHHHHHHHHTSCCC
T ss_pred CCEEEEECCCCCchhHHHHHHHHHHHhCCC
Confidence 578999999996 7644 34445555763
No 175
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=28.43 E-value=74 Score=27.60 Aligned_cols=42 Identities=19% Similarity=0.266 Sum_probs=33.0
Q ss_pred CCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHHHHHH
Q 009581 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK 394 (531)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~aW~~ 394 (531)
++-+|.+++.+-.........|+..||..|..-..|..+|..
T Consensus 11 k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~ 52 (134)
T 3to5_A 11 KNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPM 52 (134)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHH
Confidence 555788888776655678889999999878777888888764
No 176
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=28.03 E-value=44 Score=28.40 Aligned_cols=27 Identities=19% Similarity=0.164 Sum_probs=18.5
Q ss_pred CcEEEEEeCCCcH-HHHHHHH----HHHccCC
Q 009581 354 RSKVIVMDADGTR-SKGIARS----LRKLGVM 380 (531)
Q Consensus 354 d~~IVVyC~sG~R-S~~AA~~----L~~lGf~ 380 (531)
-.+|++.|.+|.. |..++.. +.+.|++
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 4579999999984 4434544 4567774
No 177
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=27.84 E-value=50 Score=28.91 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=19.1
Q ss_pred CCcEEEEEeCCC-cHHHHH--HHHHHHccC
Q 009581 353 DRSKVIVMDADG-TRSKGI--ARSLRKLGV 379 (531)
Q Consensus 353 kd~~IVVyC~sG-~RS~~A--A~~L~~lGf 379 (531)
.+.+|+|+|..| .||..+ +.+++..|+
T Consensus 84 ~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 84 QNCGVLVHSLAGVSRSVTVTVAYLMQKLHL 113 (155)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence 568999999999 487643 445555565
No 178
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=27.49 E-value=46 Score=30.31 Aligned_cols=28 Identities=18% Similarity=0.310 Sum_probs=20.4
Q ss_pred CCcEEEEEeCCC-cHHHH--HHHHHHHccCC
Q 009581 353 DRSKVIVMDADG-TRSKG--IARSLRKLGVM 380 (531)
Q Consensus 353 kd~~IVVyC~sG-~RS~~--AA~~L~~lGf~ 380 (531)
.+.+|+|+|..| .||.. ++.+++..|++
T Consensus 96 ~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~s 126 (188)
T 2esb_A 96 KQGRTLLHCAAGVSRSAALCLAYLMKYHAMS 126 (188)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 578999999999 48764 45566666663
No 179
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=27.46 E-value=59 Score=31.33 Aligned_cols=32 Identities=22% Similarity=0.173 Sum_probs=26.5
Q ss_pred cEEEEEeCCCc-HHHHHHHHHHHccCCceEEecc
Q 009581 355 SKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQG 387 (531)
Q Consensus 355 ~~IVVyC~sG~-RS~~AA~~L~~lGf~nV~~L~G 387 (531)
-++-++|.+.+ ||..|-..|++.|| +|..+--
T Consensus 26 Lr~avVCaSN~NRSMEAH~~L~k~Gf-~V~SfGT 58 (214)
T 4h3k_B 26 LRVAVVSSSNQNRSMEAHNILSKRGF-SVRSFGT 58 (214)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CeEEEECCCCcchhHHHHHHHHHCCC-ceEeecC
Confidence 35889998865 99999999999999 6886643
No 180
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=26.47 E-value=25 Score=34.11 Aligned_cols=33 Identities=9% Similarity=0.054 Sum_probs=26.2
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||.... ...+..|..+|+.||.++..
T Consensus 281 ~~iya~GD~~~~~----~~~~~~A~~~g~~aA~~i~~ 313 (335)
T 2a87_A 281 PGVFAAGDLVDRT----YRQAVTAAGSGCAAAIDAER 313 (335)
T ss_dssp TTEEECGGGTCCS----CCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeeecCCcc----HHHHHHHHHhHHHHHHHHHH
Confidence 4699999998751 23577889999999998873
No 181
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=25.76 E-value=2.7e+02 Score=22.59 Aligned_cols=41 Identities=17% Similarity=0.269 Sum_probs=29.5
Q ss_pred CcEEEEEeCCCcHHHHHHHHHHHccCC-ceEEecchHHHHHH
Q 009581 354 RSKVIVMDADGTRSKGIARSLRKLGVM-RAFLVQGGFQSWVK 394 (531)
Q Consensus 354 d~~IVVyC~sG~RS~~AA~~L~~lGf~-nV~~L~GG~~aW~~ 394 (531)
..+|++++.+..........|...||. .+.....+-.++..
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~ 46 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQ 46 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHH
Confidence 356777777777667788899999995 36666667666654
No 182
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=25.44 E-value=1.7e+02 Score=29.61 Aligned_cols=27 Identities=11% Similarity=0.233 Sum_probs=17.7
Q ss_pred CCcEEEEEeCCCc-HHHHHH--HHHHHccC
Q 009581 353 DRSKVIVMDADGT-RSKGIA--RSLRKLGV 379 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~AA--~~L~~lGf 379 (531)
.+.+|+|+|..|. |+..++ .++...|+
T Consensus 268 ~~~~VLVHC~aG~gRTGtvvaayLm~~~g~ 297 (348)
T 1ohe_A 268 AEGAIAVHSKAGLGRTGTLIACYIMKHYRM 297 (348)
T ss_dssp CSSEEEEECSSSSHHHHHHHHHHHHHHHCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 5789999999985 765433 33333555
No 183
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=25.02 E-value=25 Score=33.85 Aligned_cols=35 Identities=6% Similarity=-0.070 Sum_probs=26.9
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... .. -...+..|..||+.+|.++.+
T Consensus 280 ~~vya~GD~~~~-~~-~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 280 PGVYACGDIVTY-PG-KLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp TTEEECSTTEEC-TT-CCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEecccccc-Cc-chhhhhhhHHHHHHHHHHHHH
Confidence 469999999875 22 123477889999999999984
No 184
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=24.36 E-value=99 Score=28.40 Aligned_cols=37 Identities=22% Similarity=0.385 Sum_probs=31.3
Q ss_pred CCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHH
Q 009581 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (531)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~ 390 (531)
+..+++|||++-..+...+..|...|+ .+..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~lhg~~~ 66 (212)
T 3eaq_A 30 SPDRAMVFTRTKAETEEIAQGLLRLGH-PAQALHGDLS 66 (212)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHHTC-CEEEECSSSC
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCC-CEEEEECCCC
Confidence 467899999988888889999999999 4888888853
No 185
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=24.32 E-value=30 Score=34.88 Aligned_cols=34 Identities=9% Similarity=-0.044 Sum_probs=26.7
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... .....+..|.+||+.+|+++..
T Consensus 300 ~~vfa~GD~~~~---~~~~~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 300 DNVYAVGDANSM---TVPKLGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp TTEEECGGGBTT---CCSCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeehhccC---CCCcHHHHHHHHHHHHHHHHHH
Confidence 369999999874 1123367899999999999985
No 186
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=23.93 E-value=27 Score=34.25 Aligned_cols=35 Identities=9% Similarity=0.026 Sum_probs=26.8
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... ... ...+..|..||+.+|.++.+
T Consensus 291 ~~vya~GD~~~~-~~~-~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 291 DGLYAAGDIAYY-PGK-LKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp TTEEECSTTEEC-TTC-CCSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEecCccCC-CCc-cceeehhHHHHHHHHHHHHh
Confidence 469999999875 211 23477899999999999984
No 187
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=22.51 E-value=2.6e+02 Score=25.10 Aligned_cols=81 Identities=17% Similarity=0.202 Sum_probs=42.1
Q ss_pred CCcEEEEEeCCCc----HHHHHHHHHHHccCCceEEecchHHHHHHcCCceeccccchhhhhhhhcHHHHHhhhcCCCce
Q 009581 353 DRSKVIVMDADGT----RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPVQ 428 (531)
Q Consensus 353 kd~~IVVyC~sG~----RS~~AA~~L~~lGf~nV~~L~GG~~aW~~aGLPV~~~~p~~a~s~l~~~~~el~~~i~p~pv~ 428 (531)
+..+.||++.+.. .-...+..|...|| +|+.++ |+..|..-...........+..+..++++.+...++.
T Consensus 44 ~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~-~v~~~d-----~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGTWERTIDVLADAGY-RVIAVD-----QVGFCKSSKPAHYQYSFQQLAANTHALLERLGVARAS 117 (315)
T ss_dssp CCSCEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEEC-----CTTSTTSCCCSSCCCCHHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCeEEEEcCCCCcchHHHHHHHHHHHCCC-eEEEee-----cCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCceE
Confidence 4556777775432 22345667888899 577665 1112221111111222333445566677776666788
Q ss_pred EEch--hHHHHHH
Q 009581 429 FLGF--GVTIYRR 439 (531)
Q Consensus 429 vlG~--g~T~~~r 439 (531)
++|. |-.+..+
T Consensus 118 l~G~S~Gg~~a~~ 130 (315)
T 4f0j_A 118 VIGHSMGGMLATR 130 (315)
T ss_dssp EEEETHHHHHHHH
T ss_pred EEEecHHHHHHHH
Confidence 8874 4444443
No 188
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=22.47 E-value=31 Score=37.97 Aligned_cols=31 Identities=13% Similarity=0.048 Sum_probs=26.6
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++|||... ..+..|..||+.+|.++.+
T Consensus 642 ~~VyaiGD~~~~------~~~~~A~~~g~~aa~~i~~ 672 (690)
T 3k30_A 642 ASVRGIGDAWAP------GTIAAAVWSGRRAAEEFDA 672 (690)
T ss_dssp SEEEECGGGTSC------BCHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCch------hhHHHHHHHHHHHHHHHHh
Confidence 579999999975 4566699999999999985
No 189
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=22.21 E-value=54 Score=29.53 Aligned_cols=41 Identities=24% Similarity=0.304 Sum_probs=30.0
Q ss_pred CCcEEEEEeCCCc-HHHHHHHHHHHc----cC-CceEEecchHHHHH
Q 009581 353 DRSKVIVMDADGT-RSKGIARSLRKL----GV-MRAFLVQGGFQSWV 393 (531)
Q Consensus 353 kd~~IVVyC~sG~-RS~~AA~~L~~l----Gf-~nV~~L~GG~~aW~ 393 (531)
+..+|+++|.+.. ||..|-.+|+.+ |. .++.+..-|...|.
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~ 49 (161)
T 2cwd_A 3 RPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWH 49 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCc
Confidence 3457999997654 998887777654 55 36778888888773
No 190
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=22.05 E-value=49 Score=30.01 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=28.2
Q ss_pred cEEEEEeCCCc-HHHHHHHHHHHc----cCCceEEecchHHHH
Q 009581 355 SKVIVMDADGT-RSKGIARSLRKL----GVMRAFLVQGGFQSW 392 (531)
Q Consensus 355 ~~IVVyC~sG~-RS~~AA~~L~~l----Gf~nV~~L~GG~~aW 392 (531)
.+|+++|.+.. ||..|..+|+.+ |..++.+...|...|
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~ 49 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW 49 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 47999997654 998887777554 665577777888776
No 191
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=22.04 E-value=65 Score=28.90 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=19.1
Q ss_pred CCcEEEEEeCCC-cHHHHH--HHHHHHccC
Q 009581 353 DRSKVIVMDADG-TRSKGI--ARSLRKLGV 379 (531)
Q Consensus 353 kd~~IVVyC~sG-~RS~~A--A~~L~~lGf 379 (531)
.+.+|+|+|..| .||..+ +++++..|+
T Consensus 86 ~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~ 115 (177)
T 2oud_A 86 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 115 (177)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred cCCcEEEEcCCCCCchHHHHHHHHHHHcCC
Confidence 568999999998 487653 345555565
No 192
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=21.99 E-value=73 Score=31.52 Aligned_cols=38 Identities=13% Similarity=0.116 Sum_probs=32.5
Q ss_pred CCCcEEEEEeCCCcHHHHHHHHHHHccCCceEEecchHH
Q 009581 352 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (531)
Q Consensus 352 ~kd~~IVVyC~sG~RS~~AA~~L~~lGf~nV~~L~GG~~ 390 (531)
.++.+++|+|++-..+...+..|...|+ ++..+.|++.
T Consensus 274 ~~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~~ 311 (417)
T 2i4i_A 274 GKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 311 (417)
T ss_dssp CTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHCCC-CeeEecCCCC
Confidence 4678899999998888899999999999 5888888763
No 193
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=21.95 E-value=35 Score=35.68 Aligned_cols=32 Identities=9% Similarity=0.185 Sum_probs=25.9
Q ss_pred cccccccchhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~gda~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..|||+|||+.- - ..+..|..|||.||.+|..
T Consensus 410 ~~VfA~GD~~~g-~----~~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 410 DGVFAAGDIVRG-A----SLVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp TTEEECGGGGSS-C----CSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeccccCC-c----hHHHHHHHHHHHHHHHHHH
Confidence 469999999864 1 3467899999999998874
No 194
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=20.88 E-value=96 Score=29.57 Aligned_cols=31 Identities=26% Similarity=0.174 Sum_probs=26.0
Q ss_pred cEEEEEeCCCc-HHHHHHHHHHHccCCceEEec
Q 009581 355 SKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQ 386 (531)
Q Consensus 355 ~~IVVyC~sG~-RS~~AA~~L~~lGf~nV~~L~ 386 (531)
-++-++|.+.. ||..|-..|++.|| +|..+-
T Consensus 10 l~~avVCaSN~NRSMEaH~~L~k~G~-~V~SfG 41 (198)
T 3p9y_A 10 LAVAVVDSSNMNRSMEAHNFLAKKGF-NVRSYG 41 (198)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHTTC-EEEEEE
T ss_pred ceEEEEcCCCCcccHHHHHHHHhCCC-ceeecC
Confidence 47899998765 99999999999999 577653
No 195
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=20.20 E-value=47 Score=31.75 Aligned_cols=33 Identities=18% Similarity=0.152 Sum_probs=24.8
Q ss_pred ccccccc--chhhhhhhhhccccchhhhhhhHHHHHhhc
Q 009581 91 SSMIKGE--NAVKSSLDTITSSLTSIKKSTSEAVDNVVS 127 (531)
Q Consensus 91 ~~i~a~g--da~~~~~~~~t~~~~~a~k~~r~~~d~~~~ 127 (531)
..||++| ||..- ....+..|..||+.+|.++..
T Consensus 315 ~~vya~Gd~d~~~~----~~~~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 315 PSVWLLGYGDWNGM----ASATLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp TTEEECSSCGGGST----TCSSTTTHHHHHHHHHHHHHH
T ss_pred CCeEEecccccccc----chhhhhhhHHHHHHHHHHHHH
Confidence 4699999 55542 234477799999999998874
Done!