BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009583
         (531 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q84ZT9|WVD2_ARATH Protein WAVE-DAMPENED 2 OS=Arabidopsis thaliana GN=WVD2 PE=2 SV=1
          Length = 202

 Score = 67.0 bits (162), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 385 RLRTEERAARRKE---KLEEKFNANQIQKLQKQVTLKEKAETEIRKLRQTLCFKARPLPH 441
           R R+ +RA +RKE   KLEEK  A + ++++ +   KE+ E  I++LR+ L FKA P+P 
Sbjct: 88  RFRSAQRAEKRKEYYQKLEEKHQALEAERIELEQRQKEEQEAAIKQLRKNLKFKANPVPD 147

Query: 442 FYKERAIPKSQMNKDPPTRPQSPKLTAS 469
           FY +R   K ++ K P TRP+SPKL  S
Sbjct: 148 FYYQRPPVKPELKKFPLTRPKSPKLNLS 175


>sp|Q8GYX9|WDL1_ARATH Protein WVD2-like 1 OS=Arabidopsis thaliana GN=WDL1 PE=2 SV=1
          Length = 286

 Score = 60.1 bits (144), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 3/87 (3%)

Query: 386 LRTEERAARRKE---KLEEKFNANQIQKLQKQVTLKEKAETEIRKLRQTLCFKARPLPHF 442
            R+ +RA +RKE   KLEEK  A + ++ + +   K++ E  +++LR+ L FKA+P+P+F
Sbjct: 128 FRSAQRAEKRKEYYQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKAKPVPNF 187

Query: 443 YKERAIPKSQMNKDPPTRPQSPKLTAS 469
           Y E    K ++ K P TRP+SPKL  S
Sbjct: 188 YYEAPPAKPELKKLPLTRPKSPKLILS 214


>sp|E2RYF8|TPX2_ASTPE Targeting protein for Xklp2 homolog OS=Asterina pectinifera GN=TPX2
           PE=2 SV=1
          Length = 891

 Score = 32.7 bits (73), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 7/90 (7%)

Query: 384 FRLRTEERAARRKEKLEEKFN---ANQIQKLQKQVTLKEKAETEIRKLRQTLCFKARPLP 440
           F L TE RA  RK   + K+    A    + Q++   +E+   +I K R     KA+P+ 
Sbjct: 799 FSLNTERRAEDRKGYEQAKYERQLAQDTAQAQREAEKEEELRQQISKQRADSIHKAKPVR 858

Query: 441 HFYKERAIPKSQMNKDPPTRPQSPKLTAST 470
           H+     +P ++    P T+P++PK +  T
Sbjct: 859 HYKAVEVLPSTK----PLTQPKTPKFSDRT 884


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.307    0.121    0.336 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,748,538
Number of Sequences: 539616
Number of extensions: 8003226
Number of successful extensions: 31127
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 729
Number of HSP's that attempted gapping in prelim test: 29441
Number of HSP's gapped (non-prelim): 2115
length of query: 531
length of database: 191,569,459
effective HSP length: 122
effective length of query: 409
effective length of database: 125,736,307
effective search space: 51426149563
effective search space used: 51426149563
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)