Query 009586
Match_columns 531
No_of_seqs 192 out of 819
Neff 5.2
Searched_HMMs 46136
Date Thu Mar 28 14:54:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009586.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009586hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00148 potassium transporter 100.0 1E-178 2E-183 1468.9 46.7 528 1-531 239-785 (785)
2 PLN00149 potassium transporter 100.0 2E-178 4E-183 1468.0 48.0 527 1-531 240-779 (779)
3 PLN00151 potassium transporter 100.0 1E-177 3E-182 1459.1 48.4 523 1-531 316-852 (852)
4 PLN00150 potassium ion transpo 100.0 1E-177 3E-182 1459.0 48.1 520 1-531 256-779 (779)
5 TIGR00794 kup potassium uptake 100.0 4E-159 8E-164 1306.9 45.0 478 1-531 210-688 (688)
6 PRK10745 trkD potassium transp 100.0 8E-144 2E-148 1170.3 38.4 435 1-531 185-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 7E-134 2E-138 1084.3 27.7 361 1-364 174-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 6E-131 1E-135 1047.0 36.9 438 1-531 190-627 (627)
9 PF14362 DUF4407: Domain of un 71.5 42 0.00092 34.6 11.2 83 182-264 16-111 (301)
10 COG4059 MtrE Tetrahydromethano 59.5 9.4 0.0002 38.7 3.4 39 227-265 243-287 (304)
11 TIGR03813 put_Glu_GABA_T putat 47.9 62 0.0013 35.3 7.8 19 240-258 434-452 (474)
12 PF06570 DUF1129: Protein of u 47.6 88 0.0019 30.7 8.1 21 239-259 179-199 (206)
13 TIGR00911 2A0308 L-type amino 47.0 60 0.0013 35.7 7.6 16 34-49 240-255 (501)
14 PRK10655 potE putrescine trans 39.9 2.6E+02 0.0057 30.0 11.0 16 126-141 296-311 (438)
15 KOG3643 GABA receptor [Signal 37.9 20 0.00043 39.6 2.0 86 134-223 225-319 (459)
16 PRK05151 electron transport co 31.8 1.4E+02 0.003 29.7 6.6 47 160-206 15-63 (193)
17 COG2179 Predicted hydrolase of 31.7 11 0.00023 36.8 -1.1 67 460-527 48-118 (175)
18 cd05900 Ig_Aggrecan Immunoglob 31.6 57 0.0012 29.1 3.6 30 338-367 73-102 (112)
19 PF02660 G3P_acyltransf: Glyce 30.5 5.1E+02 0.011 25.0 10.4 84 171-264 90-175 (178)
20 TIGR01940 nqrE NADH:ubiquinone 30.4 1.8E+02 0.0039 29.1 7.1 47 160-206 14-62 (200)
21 TIGR00907 2A0304 amino acid pe 29.4 2E+02 0.0044 31.3 8.1 25 240-264 454-478 (482)
22 PRK10435 cadB lysine/cadaverin 28.6 4.7E+02 0.01 28.2 10.7 64 127-196 295-363 (435)
23 KOG4742 Predicted chitinase [G 28.5 26 0.00056 36.7 1.0 37 51-93 171-210 (286)
24 PRK14417 membrane protein; Pro 28.0 3.9E+02 0.0084 27.4 9.2 18 172-189 100-117 (232)
25 PF05545 FixQ: Cbb3-type cytoc 27.6 61 0.0013 24.7 2.7 27 250-276 21-47 (49)
26 TIGR00930 2a30 K-Cl cotranspor 27.1 4.1E+02 0.0088 32.5 10.7 24 120-143 404-427 (953)
27 TIGR00145 FTR1 family protein. 27.0 3.6E+02 0.0079 28.2 9.0 31 243-273 79-109 (283)
28 TIGR00905 2A0302 transporter, 26.5 2.6E+02 0.0057 30.5 8.4 32 110-141 290-321 (473)
29 TIGR00909 2A0306 amino acid tr 26.5 3.2E+02 0.007 29.1 8.9 104 37-141 203-317 (429)
30 COG0531 PotE Amino acid transp 26.2 5.4E+02 0.012 27.3 10.5 107 33-140 205-324 (466)
31 TIGR03810 arg_ornith_anti argi 25.7 5.3E+02 0.011 28.1 10.5 44 98-141 274-317 (468)
32 PF07331 TctB: Tripartite tric 25.0 5E+02 0.011 23.2 11.5 18 98-115 31-48 (141)
33 PRK11049 D-alanine/D-serine/gl 24.8 5.1E+02 0.011 28.3 10.2 106 35-141 217-333 (469)
34 PRK13108 prolipoprotein diacyl 24.5 3.2E+02 0.007 30.6 8.5 19 182-200 24-42 (460)
35 PRK12456 Na(+)-translocating N 24.1 2.2E+02 0.0049 28.4 6.5 47 160-206 16-64 (199)
36 PF05297 Herpes_LMP1: Herpesvi 24.1 26 0.00056 36.9 0.0 60 203-265 126-190 (381)
37 PF02508 Rnf-Nqr: Rnf-Nqr subu 24.1 3E+02 0.0064 27.1 7.4 87 160-247 15-110 (190)
38 PF13520 AA_permease_2: Amino 23.7 99 0.0022 32.7 4.4 158 33-196 192-366 (426)
39 PRK01061 Na(+)-translocating N 23.5 2.4E+02 0.0052 29.1 6.8 45 160-204 22-68 (244)
40 PF06155 DUF971: Protein of un 23.0 48 0.001 28.1 1.4 14 501-514 26-39 (89)
41 PF05313 Pox_P21: Poxvirus P21 22.5 91 0.002 30.8 3.4 62 62-133 88-149 (189)
42 KOG3145 Cystine transporter Cy 21.6 47 0.001 35.2 1.3 38 24-62 287-341 (372)
43 TIGR00908 2A0305 ethanolamine 20.8 3.8E+02 0.0081 28.8 8.1 20 122-141 296-315 (442)
44 PF12365 DUF3649: Protein of u 20.7 51 0.0011 22.9 0.9 21 55-75 2-22 (28)
45 PF11086 DUF2878: Protein of u 20.5 5.2E+02 0.011 24.4 8.0 82 180-265 19-100 (152)
No 1
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=1e-178 Score=1468.88 Aligned_cols=528 Identities=51% Similarity=0.923 Sum_probs=474.0
Q ss_pred CccccccCcceeeecChHHHHHHHHhcCCcceeeecceeeeecchhhhhhccCCCCccceeehhhhhhhhHHHhhcccch
Q 009586 1 MLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQA 80 (531)
Q Consensus 1 iyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~ 80 (531)
+|||+++||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+|||
T Consensus 239 iyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQa 318 (785)
T PLN00148 239 LYNIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQA 318 (785)
T ss_pred HHHHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccccccccccCcchhHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCceeEEecCCccCCccccchhh
Q 009586 81 AYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDIN 160 (531)
Q Consensus 81 A~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vN 160 (531)
|||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++||||||+||
T Consensus 319 A~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vN 398 (785)
T PLN00148 319 AFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEIN 398 (785)
T ss_pred HHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhheeEEEecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 009586 161 WILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGG 240 (531)
Q Consensus 161 w~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GG 240 (531)
|+||++|+++|++||||++||||||+||++||++||||+++||+.+|+||++++++|+++|+++|++|||||++||+|||
T Consensus 399 w~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GG 478 (785)
T PLN00148 399 WILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGG 478 (785)
T ss_pred HHHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHHhhCCccce
Q 009586 241 WVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHS 320 (531)
Q Consensus 241 W~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~vP~~~~h~~~~~~~lhe 320 (531)
|+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||
T Consensus 479 W~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe 558 (785)
T PLN00148 479 WVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHK 558 (785)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccc
Confidence 99999999999999999999999999999999999999999888888999999999999999999999999999999999
Q ss_pred EEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEEeeccCCCChHHHHHHHHHHHHHHHHhhhhhcC------CC
Q 009586 321 VVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEG------CS 394 (531)
Q Consensus 321 ~~Vfv~v~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~~L~~FI~~e~~~~~------~~ 394 (531)
++||||||++|+|+||++|||+++|++++++++|||++||||||.+++++|||++|+++|++|||+|+.+.+ .+
T Consensus 559 ~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~ 638 (785)
T PLN00148 559 VLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSS 638 (785)
T ss_pred eEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhccccccccccc
Confidence 999999999999999999999999999999999999999999999988999999999999999999985421 11
Q ss_pred CCCCcccccccccccccc-cc--C------CCCCCCCCCccc---ccccccC-cCCCCCCccccccccccccCCCCChHH
Q 009586 395 DSDEYSLYGQQTLQSTDG-LL--N------NNGNSTSSNQDL---TMSSVDS-IVPVKSPLHVNSTVMSSSQMSSHTETD 461 (531)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~-~~--~------~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~f~~~~~~~~~~~~~~v~e 461 (531)
++++++..+..++..... .. + +...+..+...+ +..+.++ ...++++++|+... +.+. +++++|
T Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~ 715 (785)
T PLN00148 639 NDGRMAVISTRDVQSSSLLMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPE-NPGM--DPSVRE 715 (785)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeecccc-cccc--cchHHH
Confidence 122333332211100000 00 0 000000000000 0111111 12345677775222 2222 578999
Q ss_pred HHHHHHhhHhcCcEEEeeccEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeeeeeeEEEC
Q 009586 462 ELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 531 (531)
Q Consensus 462 El~~L~~A~e~GVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvYev 531 (531)
|+++|++|+|+||+||+||++|||||+|||+||++||++|+|||||||+|.+.|+|||+|||||||+|||
T Consensus 716 El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 716 ELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred HHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997
No 2
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=1.9e-178 Score=1467.95 Aligned_cols=527 Identities=48% Similarity=0.864 Sum_probs=471.8
Q ss_pred CccccccCcceeeecChHHHHHHHHhcCCcceeeecceeeeecchhhhhhccCCCCccceeehhhhhhhhHHHhhcccch
Q 009586 1 MLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQA 80 (531)
Q Consensus 1 iyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~ 80 (531)
+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+|||
T Consensus 240 iyni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQa 319 (779)
T PLN00149 240 VYNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQA 319 (779)
T ss_pred HHHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccc---cccccccccccCcchhHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCceeEEecCCccCCccccc
Q 009586 81 AYLMNHQD---HVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIP 157 (531)
Q Consensus 81 A~l~~~p~---~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP 157 (531)
|||++||+ +++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++||||||
T Consensus 320 A~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP 399 (779)
T PLN00149 320 AYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIP 399 (779)
T ss_pred HHHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeH
Confidence 99999996 556699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHhheeEEEecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 009586 158 DINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVD 237 (531)
Q Consensus 158 ~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~ 237 (531)
+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+|+||++++++|+++|+++|++|||||++||+
T Consensus 400 ~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~ 479 (779)
T PLN00149 400 EINWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFL 479 (779)
T ss_pred HHHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHHhhCCc
Q 009586 238 QGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPA 317 (531)
Q Consensus 238 ~GGW~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~vP~~~~h~~~~~~~ 317 (531)
||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||+
T Consensus 480 ~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~ 559 (779)
T PLN00149 480 EGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPA 559 (779)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred cceEEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEEeeccCCCChHHHHHHHHHHHHHHHHhhhhhcCC----
Q 009586 318 IHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGC---- 393 (531)
Q Consensus 318 lhe~~Vfv~v~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~~L~~FI~~e~~~~~~---- 393 (531)
+||++||||||++|+|+||++|||+++|++++++++|||++||||||..++++|||++|+++|++|||+|+.+.+.
T Consensus 560 lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~ 639 (779)
T PLN00149 560 FHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPEN 639 (779)
T ss_pred ccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhcccccccc
Confidence 9999999999999999999999999999999999999999999999999989999999999999999999743221
Q ss_pred --CCCCCcccccccccccc-ccccC-C--CCCCCCCCcccccccccCcCCCCCCccccccccccccCCCCChHHHHHHHH
Q 009586 394 --SDSDEYSLYGQQTLQST-DGLLN-N--NGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLN 467 (531)
Q Consensus 394 --~~~~~~~~~~~~~~~~~-~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~ 467 (531)
+++++++..++.+.... ....+ . ...+..+ ...+...+......+++++|+... +.+. +++++||+++|+
T Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~v~eEl~~L~ 715 (779)
T PLN00149 640 EEGEDERMTVVGTCSTHLEGIQLREDDSDKQEPAGT-SELREIRSPPVSRPKKRVRFVVPE-SPKI--DRGAREELQELM 715 (779)
T ss_pred cccccccccccccccccccccccccccccccccccc-cccccccCccccCcccceeecccc-cccc--chhHHHHHHHHH
Confidence 11233333322111000 00000 0 0000000 000000111111223577775322 2222 578999999999
Q ss_pred hhHhcCcEEEeeccEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeeeeeeEEEC
Q 009586 468 SCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 531 (531)
Q Consensus 468 ~A~e~GVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvYev 531 (531)
+|||+||+||+||++|||||+|||+||++|||+|+|||||||+|.+.|+|||+|||||||+|||
T Consensus 716 ~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 716 EAREAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HHHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999997
No 3
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=1.3e-177 Score=1459.12 Aligned_cols=523 Identities=47% Similarity=0.882 Sum_probs=465.3
Q ss_pred CccccccCcceeeecChHHHHHHHHhcCCcceeeecceeeeecchhhhhhccCCCCccceeehhhhhhhhHHHhhcccch
Q 009586 1 MLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQA 80 (531)
Q Consensus 1 iyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~ 80 (531)
||||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+|||
T Consensus 316 iynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQa 395 (852)
T PLN00151 316 IYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQA 395 (852)
T ss_pred HHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccccccccccCcchhHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCceeEEecCCccCCccccchhh
Q 009586 81 AYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDIN 160 (531)
Q Consensus 81 A~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vN 160 (531)
|||++||++++||||+++|+|++||+|++||+||||||||||||+|||++||++||||||+||+|||++++||||||+||
T Consensus 396 A~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vN 475 (852)
T PLN00151 396 AYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVIN 475 (852)
T ss_pred HHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhheeEEEecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 009586 161 WILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGG 240 (531)
Q Consensus 161 w~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GG 240 (531)
|+||++|+++|++||||++||||||+||++||++||||+++||+.+|+||++++++|+++|+++|++|||||++||+|||
T Consensus 476 w~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GG 555 (852)
T PLN00151 476 WFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGG 555 (852)
T ss_pred HHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHHhhCCccce
Q 009586 241 WVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHS 320 (531)
Q Consensus 241 W~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~vP~~~~h~~~~~~~lhe 320 (531)
|+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||
T Consensus 556 W~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe 635 (852)
T PLN00151 556 WIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHS 635 (852)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccc
Confidence 99999999999999999999999999999999999999999999989999999999999999999999999999999999
Q ss_pred EEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEEeeccCCC-ChHHHHHHHHHHHHHHHHhhhhhcCCCCCCCc
Q 009586 321 VVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHK-KDENFEKKLFDSLFLFVRLEAMMEGCSDSDEY 399 (531)
Q Consensus 321 ~~Vfv~v~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvryGY~d~~~-~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~~ 399 (531)
++||||||++|+|+||++|||+++|++++++|+|||++||||||.++ ++++||++|+++|++|||+|+.+...+++++.
T Consensus 636 ~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~ 715 (852)
T PLN00151 636 TIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGND 715 (852)
T ss_pred eEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccc
Confidence 99999999999999999999999999999999999999999999976 78999999999999999999854211111000
Q ss_pred cc-ccc--cccc-ccccccCC-C-------CCCCCCCcccccccc-cCcCCCCCCccccccccccccCCCCChHHHHHHH
Q 009586 400 SL-YGQ--QTLQ-STDGLLNN-N-------GNSTSSNQDLTMSSV-DSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFL 466 (531)
Q Consensus 400 ~~-~~~--~~~~-~~~~~~~~-~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L 466 (531)
.. .++ .... ...+..+. . .....+.+......+ +...+..++++|. +. +++++||+++|
T Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~El~~l 787 (852)
T PLN00151 716 DTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSS------DE--DQSLEYELSFI 787 (852)
T ss_pred cccccccccccccccCCCccccccccccccccccccccccccccccccccccccccccc------cc--CccHHHHHHHH
Confidence 00 000 0000 00000000 0 000000000000000 0000001222321 11 46789999999
Q ss_pred HhhHhcCcEEEeeccEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeeeeeeEEEC
Q 009586 467 NSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 531 (531)
Q Consensus 467 ~~A~e~GVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvYev 531 (531)
++|+|+||+||+||++|||||+|+|+||++||++|+|||||||+|.++|+|||++||||||+|||
T Consensus 788 ~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 788 REAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999997
No 4
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=1.3e-177 Score=1459.05 Aligned_cols=520 Identities=58% Similarity=1.030 Sum_probs=467.2
Q ss_pred CccccccCcceeeecChHHHHHHHHhcCCcceeeecceeeeecchhhhhhccCCCCccceeehhhhhhhhHHHhhcccch
Q 009586 1 MLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQA 80 (531)
Q Consensus 1 iyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~ 80 (531)
+|||+++||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+|||
T Consensus 256 iyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~GQa 335 (779)
T PLN00150 256 CYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLGQA 335 (779)
T ss_pred HHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcchH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccccccccccCcchhHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCceeEEecCCccCCccccchhh
Q 009586 81 AYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDIN 160 (531)
Q Consensus 81 A~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vN 160 (531)
|||++||++.+||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++||||||+||
T Consensus 336 A~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vN 415 (779)
T PLN00150 336 AYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEIN 415 (779)
T ss_pred HHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhheeEEEecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 009586 161 WILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGG 240 (531)
Q Consensus 161 w~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GG 240 (531)
|+||++|+++|++||||++||||||+||++||++||||+++||+.+|+||++++++|+++|+++|++|||||+.||+|||
T Consensus 416 w~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GG 495 (779)
T PLN00150 416 WILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGG 495 (779)
T ss_pred HHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHHhhCCccce
Q 009586 241 WVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHS 320 (531)
Q Consensus 241 W~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~vP~~~~h~~~~~~~lhe 320 (531)
|+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++++|+|++|.||++|||++||
T Consensus 496 W~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~v~~~~~lhe 575 (779)
T PLN00150 496 WVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAIHS 575 (779)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHHHHHHhCCcccc
Confidence 99999999999999999999999999999999999999998888888999999999999999999999999999999999
Q ss_pred EEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEEeeccCCCChHHHHHHHHHHHHHHHHhhhhhcCCCCCCCcc
Q 009586 321 VVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYS 400 (531)
Q Consensus 321 ~~Vfv~v~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~~~ 400 (531)
++||+|||++|+|+||++|||++++++++++++|||++||||||..++++|||++|+++|++|||+|+.+...+++ +++
T Consensus 576 ~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~e~~~~~~~~~-~~~ 654 (779)
T PLN00150 576 TVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQSDLE-SMA 654 (779)
T ss_pred eEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHhhhhccccccc-ccc
Confidence 9999999999999999999999999999988999999999999999889999999999999999999754322211 222
Q ss_pred cccccccc-cccccc--CCCCC-CCCCCcccccccccCcCCCCCCccccccccccccCCCCChHHHHHHHHhhHhcCcEE
Q 009586 401 LYGQQTLQ-STDGLL--NNNGN-STSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVH 476 (531)
Q Consensus 401 ~~~~~~~~-~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvY 476 (531)
...+.++. ..++.. ...++ +.......+..+.. .+.+++.++. +. +++++||+++|++|+|+||+|
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~--~~~v~eEl~~L~~A~eaGVvY 724 (779)
T PLN00150 655 ASWTPEELMGEGNSVGSGLFTQYDQSDINFATSQEWK--RPSSQEDSVS------GH--SSDTQDEVAFLNKCKEAGVVY 724 (779)
T ss_pred cccccccccccCCcccccccccccccccccccccccc--cccccccccc------cc--cccHHHHHHHHHHHHHcCcEE
Confidence 22111100 000000 00000 00000000000011 0111233331 11 468899999999999999999
Q ss_pred EeeccEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeeeeeeEEEC
Q 009586 477 ILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 531 (531)
Q Consensus 477 IlG~~~vkak~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvYev 531 (531)
|+||++|||||+|||+||++||++|+|||||||+|.++|+|||+|||||||+|||
T Consensus 725 IlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 725 ILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred EeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=3.6e-159 Score=1306.85 Aligned_cols=478 Identities=41% Similarity=0.761 Sum_probs=451.5
Q ss_pred CccccccCcceeeecChHHHHHHHHhcCCcceeeecceeeeecchhhhhhccCCCCccceeehhhhhhhhHHHhhcccch
Q 009586 1 MLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQA 80 (531)
Q Consensus 1 iyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~ 80 (531)
+|||++|||+||+|+||+||++||.+||+.||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+|||
T Consensus 210 i~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQg 289 (688)
T TIGR00794 210 IYNIVKFNPEVLKALSPYYAVQFFIEYGTVGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQA 289 (688)
T ss_pred HHHHHhcCHHHHhHhCHHHHHHHHHHCCCceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchH
Confidence 58999889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccccccccccCcchhHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCceeEEecCCccCCccccchhh
Q 009586 81 AYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDIN 160 (531)
Q Consensus 81 A~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vN 160 (531)
|||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+||
T Consensus 290 A~ll~~p~~~~NpFf~~~P~~~~~p~~vlAtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vN 369 (688)
T TIGR00794 290 AYLSKHPEAIKNPFFLSIPDWALWPLFIIATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVN 369 (688)
T ss_pred HHHhcCcchhcCcHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhheeEEEecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 009586 161 WILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGG 240 (531)
Q Consensus 161 w~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GG 240 (531)
|+||++|+++|++||||++||+|||+||++||+|||+|+++||+.+|+||++++++|+++|+.+|++|||||+.|++|||
T Consensus 370 w~Lmv~~i~vvl~F~~S~~la~AYGiaVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GG 449 (688)
T TIGR00794 370 WLLMLGVIAVTAGFRDTNNLGAAYGIAVTGTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGG 449 (688)
T ss_pred HHHHHHHHheeEEecChHHHHHHhhhhhhhhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcC-CCCCCCccCceEEEEecCCCCchhhHHHHHhhCCccc
Q 009586 241 WVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLG-PSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIH 319 (531)
Q Consensus 241 W~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~rvpG~~if~t~~~~~vP~~~~h~~~~~~~lh 319 (531)
|+||++|++++++|++|+||++++++++.++++|++++++.+ ++.+++|+||+|+|||++++++|++|.||++|||++|
T Consensus 450 W~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lh 529 (688)
T TIGR00794 450 WFPLSLSGIFMSVMTTWRYGRFRKLRRDHEHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIH 529 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccc
Confidence 999999999999999999999999999999999999998854 4444589999999999999999999999999999999
Q ss_pred eEEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEEeeccCCCChHHHHHHHHHHHHHHHHhhhhhcCCCCCCCc
Q 009586 320 SVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEY 399 (531)
Q Consensus 320 e~~Vfv~v~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~~ 399 (531)
|++||+||+++|+|+||++||++++++++++ |+|||++||||||++|+|++|+++++++|++||+++..+...+
T Consensus 530 e~~vfltv~~~~~P~Vp~~eR~~v~~l~~~~-g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~~~~~----- 603 (688)
T TIGR00794 530 EVFIFLSLRTLDAPTVHNEERVQISQVGPTE-GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGFNLNN----- 603 (688)
T ss_pred eEEEEEEEEECCCCcCCcceEEEEEEEcCCC-CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhhcccc-----
Confidence 9999999999999999999999999999754 8999999999999999999999999999999999865310000
Q ss_pred cccccccccccccccCCCCCCCCCCcccccccccCcCCCCCCccccccccccccCCCCChHHHHHHHHhhHhcCcEEEee
Q 009586 400 SLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILG 479 (531)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG 479 (531)
. +.. + ++ +. +.+.+||++++++++|+||+|++|
T Consensus 604 ----~----------------------------~~~-------~---~~-~~----~~~~eee~~~~~~~~~~gv~yflg 636 (688)
T TIGR00794 604 ----L----------------------------EEL-------S---DK-RC----RMPIEEIFENAMETKEHGYSYFMG 636 (688)
T ss_pred ----c----------------------------ccc-------c---cc-cc----ccchHHHHHHHHHHhhcCCEEEee
Confidence 0 000 0 00 00 123578999999999999999999
Q ss_pred ccEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeeeeeeEEEC
Q 009586 480 NTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 531 (531)
Q Consensus 480 ~~~vkak~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvYev 531 (531)
|++++++++|+++||+.||.+|.|||||||++...++|||+|++||||.||+
T Consensus 637 ~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 637 EESLILKKRSPILRKIRVNHVFLFIRRNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred ceEEEECCCccHHHHHHHHHHHHHHHHhccChhhheeCChhhEEEEeeEEEC
Confidence 9999999999999999999999999999999999999999999999999996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=8e-144 Score=1170.33 Aligned_cols=435 Identities=27% Similarity=0.495 Sum_probs=413.6
Q ss_pred CccccccCcceeeecChHHHHHHHHhcCCcceeeecceeeeecchhhhhhccCCCCccceeehhhhhhhhHHHhhcccch
Q 009586 1 MLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQA 80 (531)
Q Consensus 1 iyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~ 80 (531)
+|||+ +||+||+|+||+|+++||.+||..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+|||
T Consensus 185 i~~I~-~~P~Vl~AlnP~ya~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQg 263 (622)
T PRK10745 185 LRSII-ANPEVLHALNPMWAVHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQG 263 (622)
T ss_pred HHHHh-cCHHHHhHhCHHHHHHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchH
Confidence 58999 69999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccccccccccCcchhHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCceeEEecCCccCCccccchhh
Q 009586 81 AYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDIN 160 (531)
Q Consensus 81 A~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vN 160 (531)
|||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+||
T Consensus 264 A~ll~~p~~~~NpFf~~~P~~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vN 343 (622)
T PRK10745 264 ALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVN 343 (622)
T ss_pred HHHhcCchhhcCcHHHhCChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhheeEEEecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 009586 161 WILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGG 240 (531)
Q Consensus 161 w~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GG 240 (531)
|+||++|++++++||+|++||+|||+||++||+|||+|++++++.+|+|+++++++++++|+++|++||+||+.|++|||
T Consensus 344 w~Lmv~~i~~vl~F~sS~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GG 423 (622)
T PRK10745 344 WLLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGG 423 (622)
T ss_pred HHHHHHHHeeEEEecCchHHHHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHHhhCCccce
Q 009586 241 WVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHS 320 (531)
Q Consensus 241 W~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~vP~~~~h~~~~~~~lhe 320 (531)
|+|+++|++++++|++|++|++++++++.++++|++++++.+++.++.|+||+|+|+|+..+++|+++.|++|||+++||
T Consensus 424 W~pl~ia~v~~~iM~tW~~G~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe 503 (622)
T PRK10745 424 WLPLSLGLVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHE 503 (622)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccce
Confidence 99999999999999999999999999999999999999999887777899999999999999999999999999999999
Q ss_pred EEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEEeeccCCCChHHHHHHHHHHHHHHHHhhhhhcCCCCCCCcc
Q 009586 321 VVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYS 400 (531)
Q Consensus 321 ~~Vfv~v~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~~~ 400 (531)
++||+||+++|+|+||++||++++++++ |+|||++||||||+||+|+.+++. +.+.
T Consensus 504 ~~v~l~v~~~~~P~V~~~eR~~v~~l~~---g~~rv~~~yGf~e~~~i~~~L~~~---------~~~g------------ 559 (622)
T PRK10745 504 RVILLTLRTEDAPYVHNVRRVQIEQLSP---TFWRVVASYGWRETPNVEEVFHRC---------GLEG------------ 559 (622)
T ss_pred EEEEEEEEECCCcccCcccEEEEEEECC---CEEEEEEEecCCCCCCHHHHHHHH---------HhCC------------
Confidence 9999999999999999999999999997 799999999999999998777541 0000
Q ss_pred ccccccccccccccCCCCCCCCCCcccccccccCcCCCCCCccccccccccccCCCCChHHHHHHHHhhHhcCcEEEeec
Q 009586 401 LYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGN 480 (531)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~ 480 (531)
.++ ++ ..++|.+||
T Consensus 560 -----------------------------------------~~~--~~-----------------------~~~s~fl~r 573 (622)
T PRK10745 560 -----------------------------------------LSC--RM-----------------------METSFFMSH 573 (622)
T ss_pred -----------------------------------------CCC--Cc-----------------------cceEEEEee
Confidence 000 01 167999999
Q ss_pred cEEEecCCCc---hHHHHHHHHHHHHHHhhccCCCcccccCCCCeeeeeeEEEC
Q 009586 481 TVVRASRGSK---FYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 531 (531)
Q Consensus 481 ~~vkak~~Ss---~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvYev 531 (531)
+.+...++++ |-|| +|.||.||+++....+++|++|++|+|+.+|+
T Consensus 574 ~~l~~~~~~~m~~wr~~-----lF~~m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 574 ESLILGKRPWYLRLRGK-----LFLLLQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred EEEEeCCCCCcHHHHHH-----HHHHHHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 9999888887 5444 68999999999999999999999999999986
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=6.9e-134 Score=1084.34 Aligned_cols=361 Identities=45% Similarity=0.782 Sum_probs=357.0
Q ss_pred CccccccCcceeeecChHHHHHHHHhcCCcceeeecceeeeecchhhhhhccCCCCccceeehhhhhhhhHHHhhcccch
Q 009586 1 MLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQA 80 (531)
Q Consensus 1 iyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~ 80 (531)
+|||++ +|+||+|+||+|+++||.+||+.||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+|||
T Consensus 174 ~~~I~~-~p~Vl~A~nP~yai~f~~~~~~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQg 252 (534)
T PF02705_consen 174 LYNIIQ-HPEVLKALNPYYAIRFFIRNGWIGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQG 252 (534)
T ss_pred HHHHhh-CHHHHHHhCHHHHHHHHHHcCCchhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHH
Confidence 589995 5999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccccccccccCcchhHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCceeEEecCCccCCccccchhh
Q 009586 81 AYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDIN 160 (531)
Q Consensus 81 A~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vN 160 (531)
|||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++.+||||||+||
T Consensus 253 A~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vN 332 (534)
T PF02705_consen 253 ALLLSHPEAVSNPFFLLIPEWLLWPMVILATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVN 332 (534)
T ss_pred HHHHcCcchhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhheeEEEecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 009586 161 WILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGG 240 (531)
Q Consensus 161 w~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GG 240 (531)
|+||++|++++++||||++||+|||+||++||++||+|++++++.+||||.+++++++++|+++|+.||+||+.|++|||
T Consensus 333 w~L~i~~i~vvl~F~~S~~la~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GG 412 (534)
T PF02705_consen 333 WLLMIGVIAVVLGFRSSSNLAAAYGIAVTGTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGG 412 (534)
T ss_pred HHHHHHHHhhheEECChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHHhhCCccce
Q 009586 241 WVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHS 320 (531)
Q Consensus 241 W~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~vP~~~~h~~~~~~~lhe 320 (531)
|+||++|++++++|++|++|+++++++++++++++++++++.++.++.|+||+|+|+|+..+++|+++.|+++||+++||
T Consensus 413 W~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe 492 (534)
T PF02705_consen 413 WFPLLIAAVLFTIMYTWRRGRKLLYEFERENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHE 492 (534)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEEeecc
Q 009586 321 VVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKD 364 (531)
Q Consensus 321 ~~Vfv~v~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvryGY~d 364 (531)
+++|++++++|+|+||++||++++++++ +|+|||++||||||
T Consensus 493 ~~v~l~v~~~~vP~V~~~~R~~v~~l~~--~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 493 RVVFLTVKTEPVPRVPPEERYEVERLGP--DGFYRVTLRYGFME 534 (534)
T ss_pred eEEEEEEEEeccCCCCCceEEEEEEecC--CCEEEEEEEecCCC
Confidence 9999999999999999999999999996 38999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-131 Score=1047.00 Aligned_cols=438 Identities=31% Similarity=0.556 Sum_probs=416.6
Q ss_pred CccccccCcceeeecChHHHHHHHHhcCCcceeeecceeeeecchhhhhhccCCCCccceeehhhhhhhhHHHhhcccch
Q 009586 1 MLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQA 80 (531)
Q Consensus 1 iyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~ 80 (531)
++||. +||+||+|+||+||++|+.++|..||+.||+|+||+||+||||||||||||+|||.||+++|+|||+|||+|||
T Consensus 190 l~~i~-~~p~IL~AiNP~yAi~fl~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQG 268 (627)
T COG3158 190 LINII-DDPEILRAINPYYAVHFLLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQG 268 (627)
T ss_pred HHHHh-cCHHHHHHhChHHHHHHHHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHcccc
Confidence 47888 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccccccccccCcchhHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCceeEEecCCccCCccccchhh
Q 009586 81 AYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDIN 160 (531)
Q Consensus 81 A~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vN 160 (531)
|++++||++..||||.++|+|++||+++|||+||||||||+|||+||+++||++||++||+||.|||++..||||||.||
T Consensus 269 A~vL~~p~a~~npFF~~~P~~aliP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN 348 (627)
T COG3158 269 ALLLSNPEAIGNPFFLLAPDWALIPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVN 348 (627)
T ss_pred ceeccCcccccCcHHHhChhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhheeEEEecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 009586 161 WILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGG 240 (531)
Q Consensus 161 w~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GG 240 (531)
|+|++++++++++||+|++||+|||+|||++|+|||+|++++++..|||+.+.+.++.++|+++|..||+||+.|+.|||
T Consensus 349 ~~L~~~V~~~vl~F~~S~~LAaAYGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GG 428 (627)
T COG3158 349 WLLLVAVVFVVLGFGSSSNLAAAYGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGG 428 (627)
T ss_pred HHHHHHHhheeeEecChHHHHHhhChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHHhhCCccce
Q 009586 241 WVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHS 320 (531)
Q Consensus 241 W~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~vP~~~~h~~~~~~~lhe 320 (531)
|+|+++|++++++|+||++|+++.+++..++++|+|.+++.+++..+.|||||++|+|+..+-+|.++.|++|||+++||
T Consensus 429 w~pllia~~i~~vM~tW~~g~~~l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe 508 (627)
T COG3158 429 WLPLLLAAVIFFVMWTWKRGRQILFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHE 508 (627)
T ss_pred ChHHHHHHHHHHHHHHhhhhhHHHHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEEeeccCCCChHHHHHHHHHHHHHHHHhhhhhcCCCCCCCcc
Q 009586 321 VVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYS 400 (531)
Q Consensus 321 ~~Vfv~v~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~~~ 400 (531)
++||+++++.++|+|+++||+.++++++ +++|+.++|||||+||+|+.+..+ +.+
T Consensus 509 ~nv~ltv~t~~~P~v~~~~r~~ve~l~~---~f~rV~l~~Gfme~pnvp~~l~~~---------~~~------------- 563 (627)
T COG3158 509 RNVFLTVRTEDVPYVHPTDRVKVEQLSD---DFVRVVLHFGFMETPNVPRALRLC---------RKK------------- 563 (627)
T ss_pred eEEEEEEEecCCCCCCccceeeeeeccC---ceEEEEEEeeccCCCCHHHHHHHH---------hhc-------------
Confidence 9999999999999999999999999998 699999999999999998776541 110
Q ss_pred ccccccccccccccCCCCCCCCCCcccccccccCcCCCCCCccccccccccccCCCCChHHHHHHHHhhHhcCcEEEeec
Q 009586 401 LYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGN 480 (531)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~ 480 (531)
+.+|+ .| ...|.+|+
T Consensus 564 ----------------------------------------G~~f~--im-----------------------~tsFfl~r 578 (627)
T COG3158 564 ----------------------------------------GLKFD--IM-----------------------ETSFFLSR 578 (627)
T ss_pred ----------------------------------------Cceec--cc-----------------------ceEEEEEe
Confidence 01121 11 35799999
Q ss_pred cEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeeeeeeEEEC
Q 009586 481 TVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 531 (531)
Q Consensus 481 ~~vkak~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvYev 531 (531)
+.++++++|++.+ +... .|.+|.||.-++...++||.+|++|+|-.-|+
T Consensus 579 e~l~~~~~~g~~~-w~~~-lfi~l~r~aa~~~~~F~lp~~rvvElGtqveI 627 (627)
T COG3158 579 ESLIASKNSGMPR-WRDR-LFIALARNAASPTDYFKLPPNRVVELGTQVEI 627 (627)
T ss_pred eeeecCCCCCchH-HHHH-HHHHHHHhcCCHHHhhCCCCCcEEEeeeeeeC
Confidence 9999999999876 5444 78999999999999999999999999976554
No 9
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=71.52 E-value=42 Score=34.62 Aligned_cols=83 Identities=12% Similarity=0.037 Sum_probs=51.2
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH----HHHHHHHhhhhcccCCCh---------HHHHHHH
Q 009586 182 NAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLV----VECTYFSAVLFKVDQGGW---------VPLVIAA 248 (531)
Q Consensus 182 ~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~----ie~~f~sa~l~Kv~~GGW---------~pl~ia~ 248 (531)
..||.+|..+.++.++-++..+..+.+.+++.++++.++++. +|-..+|+.-.+-..+.. +-+++|.
T Consensus 16 ~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~~~~~~~~~~~~~~~R~~lAvliai 95 (301)
T PF14362_consen 16 AGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIRKSDGSRKRLLQALPRLLLAVLIAI 95 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999988888888888887777666655544 555555543322221122 2234444
Q ss_pred HHHHHHHHHHHhHHHH
Q 009586 249 AFLVIMYVWHYGTVKR 264 (531)
Q Consensus 249 ~~~~im~~W~~G~~~~ 264 (531)
++...+..+-+..+..
T Consensus 96 vIs~pl~l~iF~~eI~ 111 (301)
T PF14362_consen 96 VISEPLELKIFEKEID 111 (301)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444555555555443
No 10
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=59.46 E-value=9.4 Score=38.65 Aligned_cols=39 Identities=23% Similarity=0.574 Sum_probs=31.9
Q ss_pred HHHHhhhhccc------CCChHHHHHHHHHHHHHHHHHHhHHHHH
Q 009586 227 TYFSAVLFKVD------QGGWVPLVIAAAFLVIMYVWHYGTVKRY 265 (531)
Q Consensus 227 ~f~sa~l~Kv~------~GGW~pl~ia~~~~~im~~W~~G~~~~~ 265 (531)
+|||+-..-+. +|||+.++++.++..+..+|++--+.+.
T Consensus 243 VFl~~W~~~~~d~~~~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 243 VFLSSWVTTVFDPAVSIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred hhhhhhhhhhcCcccccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 56777666665 7999999999999999999998655553
No 11
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=47.90 E-value=62 Score=35.33 Aligned_cols=19 Identities=26% Similarity=0.324 Sum_probs=13.8
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q 009586 240 GWVPLVIAAAFLVIMYVWH 258 (531)
Q Consensus 240 GW~pl~ia~~~~~im~~W~ 258 (531)
-|.+++++++++....-|-
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888777666565
No 12
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=47.62 E-value=88 Score=30.67 Aligned_cols=21 Identities=14% Similarity=0.377 Sum_probs=16.7
Q ss_pred CChHHHHHHHHHHHHHHHHHH
Q 009586 239 GGWVPLVIAAAFLVIMYVWHY 259 (531)
Q Consensus 239 GGW~pl~ia~~~~~im~~W~~ 259 (531)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999998888766653
No 13
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=47.03 E-value=60 Score=35.72 Aligned_cols=16 Identities=13% Similarity=-0.022 Sum_probs=10.7
Q ss_pred eecceeeeecchhhhh
Q 009586 34 SLGGIMLSITGTEALF 49 (531)
Q Consensus 34 ~LG~v~L~iTG~EAly 49 (531)
.+..++.+.+|-|+.=
T Consensus 240 a~~~~~~af~G~e~~~ 255 (501)
T TIGR00911 240 AFYSGIWAYGGWNYLN 255 (501)
T ss_pred HHHHHHHHHHhHHHHh
Confidence 3556677788887643
No 14
>PRK10655 potE putrescine transporter; Provisional
Probab=39.87 E-value=2.6e+02 Score=29.95 Aligned_cols=16 Identities=25% Similarity=0.598 Sum_probs=11.5
Q ss_pred hhhHHHHHHcCCCCce
Q 009586 126 FSIIKQALALGCFPRV 141 (531)
Q Consensus 126 FSi~~Qai~Lg~fPr~ 141 (531)
=-+...+-+-|.+|+.
T Consensus 296 sR~~~~~a~dg~lP~~ 311 (438)
T PRK10655 296 AQVFKSSADEGYFPKI 311 (438)
T ss_pred HHHHHHHhcCCchhHH
Confidence 3456667788999975
No 15
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=37.91 E-value=20 Score=39.59 Aligned_cols=86 Identities=20% Similarity=0.248 Sum_probs=56.7
Q ss_pred HcCCCCceeEEecCCccCC----ccccchhhHHHHHHhheeEEEecCcchhhhhhhhhhHHHHHHHHHHHHHHHH-----
Q 009586 134 ALGCFPRVKVVHTSKKFLG----QIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMI----- 204 (531)
Q Consensus 134 ~Lg~fPr~ki~hTS~~~~G----QIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~----- 204 (531)
+.|-.||+-+...=++..| |+|+|.+= +..+-=|---=|-++-.+=-.+++|+|..+||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 4899999999999888888 99999852 1111111112245555666889999999999998876321
Q ss_pred HHhhhhHHHHHHHHHHHHH
Q 009586 205 LVWRCHWILVLIFTALSLV 223 (531)
Q Consensus 205 ~~w~~~~~~~~~~~~~f~~ 223 (531)
.+.-.-+++...|+.+|++
T Consensus 301 YVKAiDiYL~vCFvfVF~s 319 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLS 319 (459)
T ss_pred ceeeehhhhhHHHHHHHHH
Confidence 2233345555666666665
No 16
>PRK05151 electron transport complex protein RsxA; Provisional
Probab=31.83 E-value=1.4e+02 Score=29.67 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=31.9
Q ss_pred hHHHHHHhheeEEEecCcchhhhhh--hhhhHHHHHHHHHHHHHHHHHH
Q 009586 160 NWILMILCIAVTAGFKNQSQIGNAY--GTAVVIVMLATTLLMTLIMILV 206 (531)
Q Consensus 160 Nw~Lmi~~i~v~~~F~~s~~l~~AY--GiaV~~~m~iTT~L~~~v~~~~ 206 (531)
|-..+.-.+.++-..--|+++.||- |+||+.||.+++.+..++-..+
T Consensus 15 nN~vl~~~LG~Cp~laVs~~~~~a~gmGlav~fV~~~s~~~~~~i~~~i 63 (193)
T PRK05151 15 NNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASICAWLVNTYI 63 (193)
T ss_pred hhHHHHHHHhcCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444444555677777776 6778999999999988877655
No 17
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=31.75 E-value=11 Score=36.79 Aligned_cols=67 Identities=25% Similarity=0.401 Sum_probs=49.1
Q ss_pred HHHHHH-HHhhHhcCcEEEeeccEEEecCCCchHHHHHHHHHHHHH---HhhccCCCcccccCCCCeeeeee
Q 009586 460 TDELEF-LNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFL---RKICRENSVIFNVPHESLLNVGQ 527 (531)
Q Consensus 460 ~eEl~~-L~~A~e~GVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FL---RkNcR~~~~~L~IPh~~LlEVGm 527 (531)
.+|+.+ +++++++|.--++-.. .+.++=..+..|+-+|++|.-. +++.|.....+++|.++.+-||-
T Consensus 48 tpe~~~W~~e~k~~gi~v~vvSN-n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGD 118 (175)
T COG2179 48 TPELRAWLAELKEAGIKVVVVSN-NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVGD 118 (175)
T ss_pred CHHHHHHHHHHHhcCCEEEEEeC-CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEcc
Confidence 444333 6667888875444332 5666667888889899877663 67888899999999999999985
No 18
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=31.60 E-value=57 Score=29.11 Aligned_cols=30 Identities=13% Similarity=0.317 Sum_probs=23.0
Q ss_pred CceEEEEEecCCCCCEEEEEEEEeeccCCC
Q 009586 338 EERFLVKRIGPKNFHMFRCVARYGYKDLHK 367 (531)
Q Consensus 338 ~eR~~v~~~~~~~~~~yR~vvryGY~d~~~ 367 (531)
+--+.+..+...|.|.|+|.+.+|.-|..+
T Consensus 73 ~asL~I~nl~~sDsG~Y~C~V~~g~~~~~~ 102 (112)
T cd05900 73 DATLEITELRSNDSGTYRCEVMHGIEDNYD 102 (112)
T ss_pred CcEEEEeecccccCEEEEEEEecCCCCcee
Confidence 334556677777789999999999888654
No 19
>PF02660 G3P_acyltransf: Glycerol-3-phosphate acyltransferase; InterPro: IPR003811 This entry describes glycerol-3-phosphate acyltransferase. It catalyses the transfer of an acyl group from acyl-phosphate (acyl-PO4) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilises acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. ; GO: 0005886 plasma membrane
Probab=30.46 E-value=5.1e+02 Score=25.05 Aligned_cols=84 Identities=14% Similarity=0.221 Sum_probs=45.5
Q ss_pred EEEecCcchhhhhhhhhhHHHHHHHHH--HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCChHHHHHHH
Q 009586 171 TAGFKNQSQIGNAYGTAVVIVMLATTL--LMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAA 248 (531)
Q Consensus 171 ~~~F~~s~~l~~AYGiaV~~~m~iTT~--L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia~ 248 (531)
-..||--..+|.+.|+-....-..+-+ ...++...++|....-.+..+..+. +- .++ .+.+++..+.+
T Consensus 90 ~l~FkGGKGvAt~~G~ll~l~p~~~li~~~~~~~~~~~~r~~s~~s~~~~~~~~-~~-~~~--------~~~~~~~~~~~ 159 (178)
T PF02660_consen 90 FLKFKGGKGVATSLGVLLALSPWLALIALAVFLILLLITRYVSLASIIAFIILP-IL-AWL--------WGYSLAYVLFA 159 (178)
T ss_pred hhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HH-HHH--------HhCCHHHHHHH
Confidence 346888888999988865554333332 2223333344433222222111111 11 111 66777777777
Q ss_pred HHHHHHHHHHHhHHHH
Q 009586 249 AFLVIMYVWHYGTVKR 264 (531)
Q Consensus 249 ~~~~im~~W~~G~~~~ 264 (531)
++..++.+|++-+..+
T Consensus 160 ~~l~~li~~~h~~Ni~ 175 (178)
T PF02660_consen 160 IILALLIIYRHRENIK 175 (178)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7778888888766655
No 20
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=30.37 E-value=1.8e+02 Score=29.11 Aligned_cols=47 Identities=17% Similarity=0.302 Sum_probs=31.3
Q ss_pred hHHHHHHhheeEEEecCcchhhhhh--hhhhHHHHHHHHHHHHHHHHHH
Q 009586 160 NWILMILCIAVTAGFKNQSQIGNAY--GTAVVIVMLATTLLMTLIMILV 206 (531)
Q Consensus 160 Nw~Lmi~~i~v~~~F~~s~~l~~AY--GiaV~~~m~iTT~L~~~v~~~~ 206 (531)
|-..+.-.+.++-...-|+++.||- |+||+.||.+++.+..++-..+
T Consensus 14 ~N~vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 14 ENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred hhHHHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444444555667777766 6778899999998888776654
No 21
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=29.44 E-value=2e+02 Score=31.33 Aligned_cols=25 Identities=20% Similarity=0.490 Sum_probs=18.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHhHHHH
Q 009586 240 GWVPLVIAAAFLVIMYVWHYGTVKR 264 (531)
Q Consensus 240 GW~pl~ia~~~~~im~~W~~G~~~~ 264 (531)
-|.+++++.++...+..|....++.
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~~r~~ 478 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYKGRKE 478 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEeceee
Confidence 5999999888888888886543333
No 22
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=28.55 E-value=4.7e+02 Score=28.18 Aligned_cols=64 Identities=22% Similarity=0.306 Sum_probs=31.7
Q ss_pred hhHHHHHHcCCCCceeEEecCCccCCccccchhhHHHHHHh---heeEEEe--cCcchhhhhhhhhhHHHHHHHH
Q 009586 127 SIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILC---IAVTAGF--KNQSQIGNAYGTAVVIVMLATT 196 (531)
Q Consensus 127 Si~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~---i~v~~~F--~~s~~l~~AYGiaV~~~m~iTT 196 (531)
...+++-+-|.+|+. .-+++| +| .|..--++...+ +..++.| ..++...++|..-++.+.+.+-
T Consensus 295 r~~~~~ardG~lP~~-f~k~nk--~g---~P~~Al~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 363 (435)
T PRK10435 295 QAGVRAANDGNFPKV-YGEVDK--NG---IPKKGLLLAAVKMTALMILITLMNSSGGKASDLFGELTGIAVLLTM 363 (435)
T ss_pred HHHHHHHhCCCccHH-HHhhCc--CC---CCHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHH
Confidence 455566788999975 222332 23 777654432111 1111111 1223456778766655555544
No 23
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=28.55 E-value=26 Score=36.69 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=24.9
Q ss_pred ccCCCCccceeehhhhhhhhHHHhhcccch--hhhcccccccc-cc
Q 009586 51 DLAHFPVSAIQIAFTVVVFPCLLLAYSGQA--AYLMNHQDHVV-DA 93 (531)
Q Consensus 51 DlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~--A~l~~~p~~~~-np 93 (531)
+=++|||.+|||+|-.--=+| ||+ .=||+|||-+. ||
T Consensus 171 gk~Y~GRG~iQlsWNyNYG~a------g~alg~dLL~~Pe~V~~np 210 (286)
T KOG4742|consen 171 GKSYYGRGPIQLSWNYNYGAA------GKALGLDLLRNPELVAMNP 210 (286)
T ss_pred CCcccccCcccccccccccHh------HhhcCchhhcCcchhccCc
Confidence 347999999999997422222 332 34788999776 44
No 24
>PRK14417 membrane protein; Provisional
Probab=28.05 E-value=3.9e+02 Score=27.37 Aligned_cols=18 Identities=28% Similarity=0.447 Sum_probs=14.2
Q ss_pred EEecCcchhhhhhhhhhH
Q 009586 172 AGFKNQSQIGNAYGTAVV 189 (531)
Q Consensus 172 ~~F~~s~~l~~AYGiaV~ 189 (531)
+.||-...+|-+-|+...
T Consensus 100 l~FKGGKGVAt~~Gvll~ 117 (232)
T PRK14417 100 LRFNGGRGIATSLGVALV 117 (232)
T ss_pred hCCcChhHHHHHHHHHHH
Confidence 369999988888888644
No 25
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=27.62 E-value=61 Score=24.67 Aligned_cols=27 Identities=19% Similarity=0.576 Sum_probs=13.3
Q ss_pred HHHHHHHHHHhHHHHHHHHHhcCCChH
Q 009586 250 FLVIMYVWHYGTVKRYEFEMHSKVSMA 276 (531)
Q Consensus 250 ~~~im~~W~~G~~~~~~~~~~~~~~~~ 276 (531)
++...+.|.|-++++-++|...++|++
T Consensus 21 ~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 21 FFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHcccchhhHHHHHccCcc
Confidence 333444455544444444555556654
No 26
>TIGR00930 2a30 K-Cl cotransporter.
Probab=27.12 E-value=4.1e+02 Score=32.51 Aligned_cols=24 Identities=8% Similarity=0.191 Sum_probs=14.9
Q ss_pred heeeehhhhHHHHHHcCCCCceeE
Q 009586 120 ATISATFSIIKQALALGCFPRVKV 143 (531)
Q Consensus 120 A~Isg~FSi~~Qai~Lg~fPr~ki 143 (531)
+.+.|+=-+....-+-|.+|..+.
T Consensus 404 a~l~~asRvl~AmArDg~lP~l~~ 427 (953)
T TIGR00930 404 ASLVSAPRLFQALCKDNIYPFLQF 427 (953)
T ss_pred HHHHHHHHHHHHHHhcCCCCcchh
Confidence 445555555566667889996533
No 27
>TIGR00145 FTR1 family protein. A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species.
Probab=27.00 E-value=3.6e+02 Score=28.21 Aligned_cols=31 Identities=19% Similarity=0.375 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCC
Q 009586 243 PLVIAAAFLVIMYVWHYGTVKRYEFEMHSKV 273 (531)
Q Consensus 243 pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~ 273 (531)
..++|+++++.|..|-..+.++++.+.++++
T Consensus 79 ~~lvAv~~l~~m~~Wm~~~~~~~~~~i~~~~ 109 (283)
T TIGR00145 79 FGVIAVVMLSYMGLWMLRMQRKWRVKIERQL 109 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999877777776666554
No 28
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=26.53 E-value=2.6e+02 Score=30.51 Aligned_cols=32 Identities=13% Similarity=0.087 Sum_probs=19.3
Q ss_pred HHHHHHHhhhheeeehhhhHHHHHHcCCCCce
Q 009586 110 ATAAAIVASQATISATFSIIKQALALGCFPRV 141 (531)
Q Consensus 110 AtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ 141 (531)
+.+++.-+.-+.+.+.=-+..+.-+-|.+|+.
T Consensus 290 ~~is~~~~~~~~~~~~sR~~~amardg~lP~~ 321 (473)
T TIGR00905 290 LIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH
Confidence 33343334445555555566666688999974
No 29
>TIGR00909 2A0306 amino acid transporter.
Probab=26.47 E-value=3.2e+02 Score=29.07 Aligned_cols=104 Identities=15% Similarity=0.053 Sum_probs=45.8
Q ss_pred ceeeeecchhhhhh--ccCCCCccceeehhhhhhhhHHHhhcccchhhhccc-c-c---cccccccc----cccCcchhH
Q 009586 37 GIMLSITGTEALFA--DLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNH-Q-D---HVVDAFYR----SIPDSIYWP 105 (531)
Q Consensus 37 ~v~L~iTG~EAlyA--DlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~A~l~~~-p-~---~~~npFf~----~~P~~~~~P 105 (531)
..+.+.+|=|+.-. +-=+-.+|.+.+|-..-+. ...+.|+.-....... | + ..++|+.. ...++.-+-
T Consensus 203 ~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~-~~~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (429)
T TIGR00909 203 LVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLI-VVTLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLI 281 (429)
T ss_pred HHHHHHhhHHHHHhhHHhccCccccccHHHHHHHH-HHHHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHH
Confidence 34566677776643 3334455666665542222 2222244433222211 1 1 11233322 222333333
Q ss_pred HHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCce
Q 009586 106 VFIVATAAAIVASQATISATFSIIKQALALGCFPRV 141 (531)
Q Consensus 106 ~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ 141 (531)
+.+.+.++..-+..+.+.+.=-+....-+.|.+|+.
T Consensus 282 ~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~ 317 (429)
T TIGR00909 282 LTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS 317 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 344444444444444444444444445578999973
No 30
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=26.23 E-value=5.4e+02 Score=27.25 Aligned_cols=107 Identities=17% Similarity=0.119 Sum_probs=60.1
Q ss_pred eeecceeeeecchhhh--hh-ccCCCCccceeehhhhhhhhHHHhhcccchhhhccccc-ccc-----ccccc---ccc-
Q 009586 33 TSLGGIMLSITGTEAL--FA-DLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQD-HVV-----DAFYR---SIP- 99 (531)
Q Consensus 33 ~~LG~v~L~iTG~EAl--yA-DlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~A~l~~~p~-~~~-----npFf~---~~P- 99 (531)
..++.++++.+|-|+. +| ++=+ .+|.|-.|-..-..-+.++-.+++.+....-|. +.. +|+.. ...
T Consensus 205 ~~~~~~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g 283 (466)
T COG0531 205 AAILLAFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGG 283 (466)
T ss_pred HHHHHHHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCc
Confidence 3455567888888865 33 2333 555566655544444444444444444444332 111 44433 222
Q ss_pred CcchhHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCc
Q 009586 100 DSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPR 140 (531)
Q Consensus 100 ~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr 140 (531)
.+..+-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 284 ~~~~~~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 284 NWGAIIIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 35555555555666655556666676677777778899998
No 31
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=25.69 E-value=5.3e+02 Score=28.11 Aligned_cols=44 Identities=9% Similarity=-0.199 Sum_probs=28.1
Q ss_pred ccCcchhHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCce
Q 009586 98 IPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRV 141 (531)
Q Consensus 98 ~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ 141 (531)
..++..+.+.+.+.++++-+..+.+.++=-+..+.-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34455555555555555555566666666667777788999965
No 32
>PF07331 TctB: Tripartite tricarboxylate transporter TctB family; InterPro: IPR009936 This entry contains bacterial proteins of around 150 residues in length, which have 4 transmembrane domains. Some of the sequences in the entry are annotated as the TctB subunit of the tripartite tricarboxylate transport(TTT) family. However there is no direct evidence to support this annotation as characterised members of this family are not associated with the entry.
Probab=24.97 E-value=5e+02 Score=23.17 Aligned_cols=18 Identities=11% Similarity=0.281 Sum_probs=13.6
Q ss_pred ccCcchhHHHHHHHHHHH
Q 009586 98 IPDSIYWPVFIVATAAAI 115 (531)
Q Consensus 98 ~P~~~~~P~~vlAtlAtI 115 (531)
.|++-+||..+...++..
T Consensus 31 ~~gp~~fP~~l~~~l~~~ 48 (141)
T PF07331_consen 31 SPGPGFFPRLLGILLLIL 48 (141)
T ss_pred CCCChHHHHHHHHHHHHH
Confidence 678899998777666544
No 33
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=24.78 E-value=5.1e+02 Score=28.28 Aligned_cols=106 Identities=12% Similarity=0.095 Sum_probs=47.7
Q ss_pred ecceeeeecchhhh--hhccCCCCccceeehhhhhhhhHHHhhcccchhhhc--ccccc---ccccccccc----cCcch
Q 009586 35 LGGIMLSITGTEAL--FADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLM--NHQDH---VVDAFYRSI----PDSIY 103 (531)
Q Consensus 35 LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~A~l~--~~p~~---~~npFf~~~----P~~~~ 103 (531)
+..++.+.+|-|+. .|.==+-.+|.|-.|-. .+.-...+.|+-....+. ..+++ .++||-... -++.-
T Consensus 217 ~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~-~~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 295 (469)
T PRK11049 217 FQIAVFAFVGIELVGTTAAETKDPEKSLPRAIN-SIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAA 295 (469)
T ss_pred HHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHH-HHHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhHH
Confidence 33456677788864 34434555666666553 222233444444433332 12232 235543221 11222
Q ss_pred hHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCce
Q 009586 104 WPVFIVATAAAIVASQATISATFSIIKQALALGCFPRV 141 (531)
Q Consensus 104 ~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ 141 (531)
.-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+.
T Consensus 296 ~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 333 (469)
T PRK11049 296 SVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA 333 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 22222233333333334344444445555578999964
No 34
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=24.46 E-value=3.2e+02 Score=30.63 Aligned_cols=19 Identities=21% Similarity=0.389 Sum_probs=14.4
Q ss_pred hhhhhhhHHHHHHHHHHHH
Q 009586 182 NAYGTAVVIVMLATTLLMT 200 (531)
Q Consensus 182 ~AYGiaV~~~m~iTT~L~~ 200 (531)
..||+++..-+++..++..
T Consensus 24 ~~YGl~ialGil~a~~l~~ 42 (460)
T PRK13108 24 RAYAVCVITGIIVALLIGD 42 (460)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6899998888887655544
No 35
>PRK12456 Na(+)-translocating NADH-quinone reductase subunit E; Provisional
Probab=24.14 E-value=2.2e+02 Score=28.38 Aligned_cols=47 Identities=15% Similarity=0.250 Sum_probs=30.8
Q ss_pred hHHHHHHhheeEEEecCcchhhhhh--hhhhHHHHHHHHHHHHHHHHHH
Q 009586 160 NWILMILCIAVTAGFKNQSQIGNAY--GTAVVIVMLATTLLMTLIMILV 206 (531)
Q Consensus 160 Nw~Lmi~~i~v~~~F~~s~~l~~AY--GiaV~~~m~iTT~L~~~v~~~~ 206 (531)
|-..+.-.+.++-..--|+++.||- |+||+.||.+++.+..++-..+
T Consensus 16 nN~vl~~~LGlCp~laVs~~~~~algmGlAvtfVl~~s~~~~~~i~~~i 64 (199)
T PRK12456 16 ENMALNFFLGMCTFLAISKKVETAFGLGLTVTALLAIATPLNNLIYTYI 64 (199)
T ss_pred hhHHHHHHHhcCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444444455555556677777776 6678888888888777766544
No 36
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=24.10 E-value=26 Score=36.93 Aligned_cols=60 Identities=20% Similarity=0.383 Sum_probs=0.0
Q ss_pred HHHHhhh--hHHHHHHHHHHHHHHHHHHHHhhhhcccCCChHHHHHH---HHHHHHHHHHHHhHHHHH
Q 009586 203 MILVWRC--HWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIA---AAFLVIMYVWHYGTVKRY 265 (531)
Q Consensus 203 ~~~~w~~--~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia---~~~~~im~~W~~G~~~~~ 265 (531)
|.+.|+. ++|-.++|++.|+.-=++...|.+ .+=+||++++- .++|.-.++|-|-+....
T Consensus 126 m~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~---L~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 126 MWLLRELGASFWTILAFCLAFLLAIVLLIIAVL---LHQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp --------------------------------------------------------------------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4445554 677788888777654444445554 46789999865 467777889988776553
No 37
>PF02508 Rnf-Nqr: Rnf-Nqr subunit, membrane protein; InterPro: IPR003667 The rnf genes of Rhodobacter capsulatus, essential for nitrogen fixation, are thought to encode a system for electron transport to nitrogenase. The rnfABCDGEH operon comprises seven genes that show similarities in gene arrangement and deduced protein sequences to homologous regions in the genomes of Haemophilus influenzae and Escherichia coli. Four of the rnf gene products were found to be similar in sequence to components of an Na+-dependent NADH:ubiquinone oxidoreductase (NQR) from Vibrio alginolyticus []. The NQR-type enzyme of Klebsiella pneumoniae was shown to catalyse sodium-dependent NADH oxidation in the respiratory chain [].; GO: 0016020 membrane
Probab=24.07 E-value=3e+02 Score=27.12 Aligned_cols=87 Identities=21% Similarity=0.385 Sum_probs=48.0
Q ss_pred hHHHHHHhheeEEEecCcchhhhh--hhhhhHHHHHHHHHHHHHHHHHH---hhh--hHHHHHHHHHHHHHHHHHH--HH
Q 009586 160 NWILMILCIAVTAGFKNQSQIGNA--YGTAVVIVMLATTLLMTLIMILV---WRC--HWILVLIFTALSLVVECTY--FS 230 (531)
Q Consensus 160 Nw~Lmi~~i~v~~~F~~s~~l~~A--YGiaV~~~m~iTT~L~~~v~~~~---w~~--~~~~~~~~~~~f~~ie~~f--~s 230 (531)
|-..+.-.+.+.-...-|+++.|| -|+||+.+|++++.+..++-..+ .+. .....+....+.-.+|... ++
T Consensus 15 ~N~vl~~~LGlcp~l~vs~~~~~a~~mGlav~~V~~~s~~~~~~l~~~il~p~~~lr~~~~ilviA~~v~~v~~~l~~~~ 94 (190)
T PF02508_consen 15 NNPVLVQFLGLCPFLAVSTSLENALGMGLAVTFVLTLSSVLISLLRNFILAPPSYLRIIVFILVIASLVQLVEMVLRAYF 94 (190)
T ss_pred hHHHHHHHHHhcchhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 333444444454455556666665 46788889999999998887776 433 2222222233333344432 12
Q ss_pred hhhhcccCCChHHHHHH
Q 009586 231 AVLFKVDQGGWVPLVIA 247 (531)
Q Consensus 231 a~l~Kv~~GGW~pl~ia 247 (531)
=.++|- =|-|+|++..
T Consensus 95 p~l~~~-LgiylpLi~~ 110 (190)
T PF02508_consen 95 PSLYKA-LGIYLPLITV 110 (190)
T ss_pred HHHHHH-HHHhhhHHHH
Confidence 233332 4777887765
No 38
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=23.73 E-value=99 Score=32.73 Aligned_cols=158 Identities=14% Similarity=0.078 Sum_probs=85.3
Q ss_pred eeecceeeeecchhhhhhccCCCCccceeehhhhhhhhHHHhhcccchhhhcccccc---c-cc------ccccc-ccCc
Q 009586 33 TSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDH---V-VD------AFYRS-IPDS 101 (531)
Q Consensus 33 ~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~l~Y~GQ~A~l~~~p~~---~-~n------pFf~~-~P~~ 101 (531)
..++..+.+.+|-|+.=.-.+-.-+|.+..+=..-+.-+.++.-+..-++...-|++ . +| .+++. -.++
T Consensus 192 ~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (426)
T PF13520_consen 192 AGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAVGGSW 271 (426)
T ss_dssp HHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHHHCCT
T ss_pred hHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhccccccc
Confidence 345667888899998655555554566655543333333333333333333333321 1 12 22232 2457
Q ss_pred chhHHHHHHHHHHHHhhhheeeehhhhHHHHHHcCCCCceeEEecCCccCCccccchhhHHHHHHhh-eeE--EEec---
Q 009586 102 IYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCI-AVT--AGFK--- 175 (531)
Q Consensus 102 ~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i-~v~--~~F~--- 175 (531)
..+.+.+++.++.+-+-.+.+.+.--++.+.-+-|.+|+. ..+++| +| .|..-.++...+- ++. ..|-
T Consensus 272 ~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~~-~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~~~~~ 345 (426)
T PF13520_consen 272 LAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPKW-FAKVNK--FG---TPYNAIILVAVISSILLLLFLFIPQS 345 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSGG-GGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTTSSSS
T ss_pred cccccccccccccccccchhhcchhhcccccccccchhhh-hhhccc--cC---CceeeehhhhHHHHHHHHHHHhhhHH
Confidence 7788888888877777677666776777777888999942 223331 22 3555444433332 222 2232
Q ss_pred CcchhhhhhhhhhHHHHHHHH
Q 009586 176 NQSQIGNAYGTAVVIVMLATT 196 (531)
Q Consensus 176 ~s~~l~~AYGiaV~~~m~iTT 196 (531)
+-+.+.+.+.+......+++.
T Consensus 346 ~~~~l~~~~~~~~~~~~~~~~ 366 (426)
T PF13520_consen 346 SFDILVSLSSVGYLISYILVI 366 (426)
T ss_dssp HHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 234566666666666666653
No 39
>PRK01061 Na(+)-translocating NADH-quinone reductase subunit E; Provisional
Probab=23.52 E-value=2.4e+02 Score=29.08 Aligned_cols=45 Identities=18% Similarity=0.224 Sum_probs=29.8
Q ss_pred hHHHHHHhheeEEEecCcchhhhhh--hhhhHHHHHHHHHHHHHHHH
Q 009586 160 NWILMILCIAVTAGFKNQSQIGNAY--GTAVVIVMLATTLLMTLIMI 204 (531)
Q Consensus 160 Nw~Lmi~~i~v~~~F~~s~~l~~AY--GiaV~~~m~iTT~L~~~v~~ 204 (531)
|-..+.-.+.++-..--|+++.+|- |+||+.||.+++.+..++-.
T Consensus 22 nN~vl~~~LG~Cp~LaVS~~~~~a~gMGlAvtfVl~~S~~i~~~l~~ 68 (244)
T PRK01061 22 QNILLSNFLGMCSYLACSSRLSTANGLGMSVALVLTVTGSINWFVHA 68 (244)
T ss_pred hhHHHHHHHhcCcchhccCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555556677777776 67788888888888877643
No 40
>PF06155 DUF971: Protein of unknown function (DUF971); InterPro: IPR010376 This domain is found in gamma-butyrobetaine dioxygenase and trimethyllysine dioxygenase proteins.; PDB: 2L6N_A 3LUU_A 2L6P_A 3MS5_A 3O2G_A 3N6W_A.
Probab=22.97 E-value=48 Score=28.14 Aligned_cols=14 Identities=29% Similarity=0.546 Sum_probs=10.6
Q ss_pred HHHHHhhccCCCcc
Q 009586 501 YAFLRKICRENSVI 514 (531)
Q Consensus 501 Y~FLRkNcR~~~~~ 514 (531)
|.|||+|||.+.-.
T Consensus 26 ~~~LRd~C~Ca~C~ 39 (89)
T PF06155_consen 26 YEWLRDNCPCAECR 39 (89)
T ss_dssp HHHHHHT-SSSSTC
T ss_pred HHHHhccCCChhhc
Confidence 78999999987644
No 41
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=22.55 E-value=91 Score=30.77 Aligned_cols=62 Identities=21% Similarity=0.204 Sum_probs=40.2
Q ss_pred ehhhhhhhhHHHhhcccchhhhccccccccccccccccCcchhHHHHHHHHHHHHhhhheeeehhhhHHHHH
Q 009586 62 IAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQAL 133 (531)
Q Consensus 62 ~aw~~~v~P~L~l~Y~GQ~A~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai 133 (531)
+|=+.+=+|||+++|+= +.=+.||.+..+ -.+-+--++.|+..=++-||+ +|.+|+++..-+
T Consensus 88 iAs~llP~PsLVIaYCl--~mqi~~~~~~~~-------~gMsIvcv~~Si~ti~~~~~s-~s~~~~ti~yIi 149 (189)
T PF05313_consen 88 IASLLLPFPSLVIAYCL--SMQIYNPGANNN-------VGMSIVCVIMSIITIIVNSVS-GSSGAYTISYII 149 (189)
T ss_pred HHHHHcCccHHHHHHHH--HheeecCCCcce-------ehhHHHHHHHHHHHHHHHhhh-HhHHHHHHHHHH
Confidence 34444567999999972 222558877666 344455556666666667888 777777766544
No 42
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=21.59 E-value=47 Score=35.24 Aligned_cols=38 Identities=34% Similarity=0.749 Sum_probs=29.6
Q ss_pred HHhcCCcceeeecceeeeecchhh-----------------hhhccCCCCccceee
Q 009586 24 FRRGGRDGWTSLGGIMLSITGTEA-----------------LFADLAHFPVSAIQI 62 (531)
Q Consensus 24 ~~~~g~~g~~~LG~v~L~iTG~EA-----------------lyADlGHF~~~~I~~ 62 (531)
+.|...+|| +.|+|+|=+|||-| .|+|+|-||-.-+.+
T Consensus 287 ~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vSi 341 (372)
T KOG3145|consen 287 FTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVSI 341 (372)
T ss_pred ceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHHH
Confidence 345566888 78999999999975 689999998654443
No 43
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=20.79 E-value=3.8e+02 Score=28.83 Aligned_cols=20 Identities=20% Similarity=0.107 Sum_probs=12.8
Q ss_pred eeehhhhHHHHHHcCCCCce
Q 009586 122 ISATFSIIKQALALGCFPRV 141 (531)
Q Consensus 122 Isg~FSi~~Qai~Lg~fPr~ 141 (531)
+.+.--++...-+-|.+||.
T Consensus 296 ~~~~sR~l~a~ardg~lP~~ 315 (442)
T TIGR00908 296 IYGYSRQIFALSRAGYLPES 315 (442)
T ss_pred HHHHHHHHHHHHhcCCccHH
Confidence 33444555555678999975
No 44
>PF12365 DUF3649: Protein of unknown function (DUF3649) ; InterPro: IPR022109 This domain family is found in bacteria and eukaryotes, and is approximately 30 amino acids in length.
Probab=20.65 E-value=51 Score=22.89 Aligned_cols=21 Identities=29% Similarity=0.425 Sum_probs=18.5
Q ss_pred CCccceeehhhhhhhhHHHhh
Q 009586 55 FPVSAIQIAFTVVVFPCLLLA 75 (531)
Q Consensus 55 F~~~~I~~aw~~~v~P~L~l~ 75 (531)
|..|+-..+|..+..|++++.
T Consensus 2 Fa~rsa~rAW~Gll~~a~~l~ 22 (28)
T PF12365_consen 2 FAARSAWRAWLGLLLPAALLA 22 (28)
T ss_pred cccchHHHHHHHHHHHHHHHH
Confidence 778888899999999999875
No 45
>PF11086 DUF2878: Protein of unknown function (DUF2878); InterPro: IPR021306 This bacterial family of proteins has no known function. Some members annotate the proteins as the permease component of a Mn2+/Zn2+ transport system however this cannot be confirmed.
Probab=20.52 E-value=5.2e+02 Score=24.42 Aligned_cols=82 Identities=15% Similarity=0.165 Sum_probs=56.2
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCChHHHHHHHHHHHHHHHHHH
Q 009586 180 IGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHY 259 (531)
Q Consensus 180 l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia~~~~~im~~W~~ 259 (531)
++.+.+...++.+++-+... ...++....+++...++=..+|.+.....+..+++++++|+=+.+.=+..+.++++
T Consensus 19 lg~~~~~~~~~~~~~~~l~~----s~~~~~~~~~~~~~~~~G~~~D~~l~~~Gv~~f~~~~~~PlWL~~LW~~Fa~~l~~ 94 (152)
T PF11086_consen 19 LGAARALWWLALLLLLHLAL----SPQRRAELRLLLLAALLGILLDSLLLYLGVFSFPGSSLFPLWLILLWLAFATTLNH 94 (152)
T ss_pred HhhhhHHHHHHHHHHHHHHH----ccCchHHHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCccHHHHHHHHHHHHHHHH
Confidence 56667777777663333322 12233333334444444456999999999999999999999999988888888887
Q ss_pred hHHHHH
Q 009586 260 GTVKRY 265 (531)
Q Consensus 260 G~~~~~ 265 (531)
.-+...
T Consensus 95 sl~wL~ 100 (152)
T PF11086_consen 95 SLAWLR 100 (152)
T ss_pred HHHHHH
Confidence 765543
Done!