BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009589
(531 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZNU6|DET1_SOLLC Light-mediated development protein DET1 OS=Solanum lycopersicum
GN=DET1 PE=1 SV=1
Length = 523
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/536 (78%), Positives = 464/536 (86%), Gaps = 18/536 (3%)
Query: 1 MFRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQY 60
MF++ NVT+R+FERQI TPAPGTS+H ARRFYEN+VPS+T+YD+ECPDHSFRKFTDDG Y
Sbjct: 1 MFKTNNVTARLFERQICTPAPGTSIHRARRFYENVVPSYTIYDVECPDHSFRKFTDDGLY 60
Query: 61 LISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELIC 120
+SFSRNHQDL+VYRP WL+FSCKEEDC HDLP KA++FESFFTQLYSVTLAS ELIC
Sbjct: 61 FVSFSRNHQDLVVYRPTWLTFSCKEEDCDTHDLPLKARKFESFFTQLYSVTLASSGELIC 120
Query: 121 KDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFH 180
KDFFL ME NQFGLFATSTAQIHDAP TG AIQGVP +EKITFHLLRL DG +LDE+VFH
Sbjct: 121 KDFFLYMESNQFGLFATSTAQIHDAPPTGGAIQGVPSVEKITFHLLRLVDGAILDERVFH 180
Query: 181 NDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLIS 240
ND++NLAH++G FLYDDLLAIVSLRYQ IHILQ+RD G+LVDVR IG FCREDDELFL S
Sbjct: 181 NDYVNLAHSIGAFLYDDLLAIVSLRYQRIHILQIRDSGDLVDVRAIGEFCREDDELFLNS 240
Query: 241 NSQSLATSERSRLNPFPGNQVGNG--HNQVNQDDSFLSGIKQRLLSFIFQGMWNEETDQA 298
NSQ L N VGNG H+ + SFLSGIKQRLLS+IF+G+WN E DQ
Sbjct: 241 NSQVLV------------NHVGNGFHHSLPQSETSFLSGIKQRLLSYIFRGIWN-EADQT 287
Query: 299 M---SLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNM 355
M LKKKF+FHFQDY+DLIIWKVQFLDRHHLLIKFGSVDGGVSRN D HP+FFAVYNM
Sbjct: 288 MRVQCLKKKFYFHFQDYIDLIIWKVQFLDRHHLLIKFGSVDGGVSRNADIHPSFFAVYNM 347
Query: 356 ETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKNKG 415
ETTE+VAFYQNSA+ELYFLFE F DHFH +S++SLHMNF+SSHSNN++ALEQLR KNK
Sbjct: 348 ETTEIVAFYQNSADELYFLFELFSDHFHVSSKSSLHMNFMSSHSNNIHALEQLRCTKNKA 407
Query: 416 GSFSQFVKKMMASLPFGCQSQSPSPYFDQSLFRYDEKLISATDRHRQSTDHPIKFISRRP 475
+FSQFVKKMMASLP CQSQSPSPYFDQSLFR+DEKLISA DRHRQSTDHPIKFISRR
Sbjct: 408 TNFSQFVKKMMASLPCSCQSQSPSPYFDQSLFRFDEKLISAIDRHRQSTDHPIKFISRRQ 467
Query: 476 PYTLKFKIKPGPEAGTIDGRTKRISSFLFHPFLPLALSIQQTLFLQPSVVNIHFRR 531
P LKFK+KPGPEAG+ DGRTK+I SFLFHP LPLALS+QQTLFLQ SVVNIHFRR
Sbjct: 468 PNILKFKMKPGPEAGSTDGRTKKICSFLFHPILPLALSVQQTLFLQASVVNIHFRR 523
>sp|P48732|DET1_ARATH Light-mediated development protein DET1 OS=Arabidopsis thaliana
GN=DET1 PE=1 SV=2
Length = 543
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/544 (70%), Positives = 451/544 (82%), Gaps = 14/544 (2%)
Query: 1 MFRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQY 60
MF S NVT+R+FERQIRTP PG SV+ AR FYEN+VPS+T+YD+E PDH FRKFT+DG +
Sbjct: 1 MFTSGNVTARVFERQIRTPPPGASVNRARHFYENLVPSYTLYDVESPDHCFRKFTEDGLF 60
Query: 61 LISFSRNHQDLIVYRPMWLSFSCKEEDCCR-HDLPPKAKRFESFFTQLYSVTLASCNELI 119
LISFSRNHQ+LIVYRP WL++S ++ LP +A +F+SFFTQLYSV LAS NELI
Sbjct: 61 LISFSRNHQELIVYRPSWLTYSTTDDSTTTLPPLPRRASKFDSFFTQLYSVNLASSNELI 120
Query: 120 CKDFFLSMEGNQFGLFATSTAQIHDAPT-TGRAIQGVPFIEKITFHLLRLEDGVVLDEKV 178
CKDFFL + +FGLFATSTAQIHD+ + + A+ GVP I+KITF LLRL+DGVVLDE+V
Sbjct: 121 CKDFFLYHQTRRFGLFATSTAQIHDSSSPSNDAVPGVPSIDKITFVLLRLDDGVVLDERV 180
Query: 179 FHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFL 238
F +DF+NLAHNMGVFLYDDLLAI+SLRYQ IH+LQ+RD G+LVD R IG FCREDDELFL
Sbjct: 181 FLHDFVNLAHNMGVFLYDDLLAILSLRYQRIHLLQIRDSGHLVDARAIGYFCREDDELFL 240
Query: 239 ISNSQSLATSERSRLNPFPGNQVGN-GHN-------QVNQDDSFLSGIKQRLLSFIFQGM 290
S+SQ++ + ++S+ G++ + G N Q + +SFLSG+KQRLLSFIF+ +
Sbjct: 241 NSSSQAMMSQDKSKQQSLSGSKEDDTGENGLRHSLSQPSGSNSFLSGVKQRLLSFIFREI 300
Query: 291 WNEETDQAM---SLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHP 347
WNEE+D M SLKKKF+FHFQDYVDLIIWKVQFLDR HLLIKFGSVDGGV+R+ DHHP
Sbjct: 301 WNEESDNVMRVQSLKKKFYFHFQDYVDLIIWKVQFLDRQHLLIKFGSVDGGVTRSADHHP 360
Query: 348 AFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQ 407
AFFAVYNMETT++VAFYQNSAE+LY LFE+F DHF +S MNF++SHSNNVYALEQ
Sbjct: 361 AFFAVYNMETTDIVAFYQNSAEDLYQLFEQFSDHFTVSSSTPF-MNFVTSHSNNVYALEQ 419
Query: 408 LRSIKNKGGSFSQFVKKMMASLPFGCQSQSPSPYFDQSLFRYDEKLISATDRHRQSTDHP 467
L+ KNK SFSQFVKKM+ SLPF CQSQSPSPYFDQSLFR+DEKLISA DRHRQS+D+P
Sbjct: 420 LKYTKNKSNSFSQFVKKMLLSLPFSCQSQSPSPYFDQSLFRFDEKLISAADRHRQSSDNP 479
Query: 468 IKFISRRPPYTLKFKIKPGPEAGTIDGRTKRISSFLFHPFLPLALSIQQTLFLQPSVVNI 527
IKFISRR P TLKFKIKPGPE GT DGR+K+I SFLFHP LPLA+SIQQTLF+ PSVVNI
Sbjct: 480 IKFISRRQPQTLKFKIKPGPECGTADGRSKKICSFLFHPHLPLAISIQQTLFMPPSVVNI 539
Query: 528 HFRR 531
HFRR
Sbjct: 540 HFRR 543
>sp|Q9D0A0|DET1_MOUSE DET1 homolog OS=Mus musculus GN=Det1 PE=2 SV=2
Length = 550
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 187/556 (33%), Positives = 289/556 (51%), Gaps = 57/556 (10%)
Query: 6 NVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFS 65
NV R+ R+I + GT H R F++N+ P+FTV ++E P RKF+ DG+Y I+FS
Sbjct: 17 NVIHRLERRRISSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFSPDGRYFIAFS 76
Query: 66 RNHQDLIVYRPMWLSFSCKE-EDCCR-------------HDLPPKAKRFESFFTQLYSVT 111
+ L +Y C+ ED + + + + FE FF L+
Sbjct: 77 SDQTSLEIYEYQ----GCQAAEDLLQGYEGEILSNGNDQRSVSIRGRLFERFFVLLHITN 132
Query: 112 LASCNELICKDFFLSMEGNQFGLFATSTAQIHDAP--------TTGRAIQGVPF--IEKI 161
+A+ E + ++ L + + + S A + D P ++ P +E
Sbjct: 133 VAANGEHLNRECSLFTDDCR-CVIVGSAAYLPDEPHPPFYEVYRNSESVTPNPRSPLEDY 191
Query: 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLV 221
+ H++ L G + D + F D + L+HN G++LY ++LAI+S++ QTIH+ QV G +
Sbjct: 192 SLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNILAILSVQQQTIHVFQVTPEGTFI 251
Query: 222 DVRTIGSFCREDDELFLISN-SQSLATSERSRLNPFPGNQVGNGHNQVNQDDSFLSGIKQ 280
DVRTIG FC EDD L + + + S+ NPF D F++ +K
Sbjct: 252 DVRTIGRFCYEDDLLTVSAVFPEVQRDSQTGMANPF--------------RDPFINSLKH 297
Query: 281 RLLSFIFQGMWNEETDQAMSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVS 340
RLL ++++ E D + K++FF +F L +WK+Q LD +HL IK+ S D
Sbjct: 298 RLLVYLWR---RAEQDGSAMAKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTSEDVVTL 354
Query: 341 RNVD-HHPAFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHS 399
R D +FF VYNM TTEV+A ++N+++EL LFE FCD F + +S + F S S
Sbjct: 355 RVTDPSQASFFVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNATLHS-EVQFPCSAS 413
Query: 400 NNVYALEQLRSIKN-----KGGSFSQFVKKMMASLPFGCQSQSPSPYFDQSLFRYDEKLI 454
+N +A + R K+ K G ++ V++++ LP QS S SPY D SLF YD+K +
Sbjct: 414 SNNFARQIQRRFKDTIINAKYGGHTEAVRRLLGQLPISAQSYSGSPYLDLSLFSYDDKWV 473
Query: 455 SATDRHRQSTDHPIKFISRRPPYTLKFKIKPGPEAGTIDGRTKRISSFLFHPFLPLALSI 514
S +R + DHPI+F +R LKF+I+ G I+ +R+ +F FHPF P A+S+
Sbjct: 474 SVMERPKTCGDHPIRFYARDSGL-LKFEIQAGLLGRPINHTVRRLVAFTFHPFEPFAISV 532
Query: 515 QQTLFLQPSVVNIHFR 530
Q+T VVN H R
Sbjct: 533 QRT--NAEYVVNFHMR 546
>sp|Q7L5Y6|DET1_HUMAN DET1 homolog OS=Homo sapiens GN=DET1 PE=1 SV=2
Length = 550
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/556 (33%), Positives = 289/556 (51%), Gaps = 57/556 (10%)
Query: 6 NVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFS 65
NV R+ R+I + GT H R F++N+ P+FTV ++E P RKF+ DG+Y I+FS
Sbjct: 17 NVIHRLERRRISSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFSPDGRYFIAFS 76
Query: 66 RNHQDLIVYRPMWLSFSCKE-EDCCR-------------HDLPPKAKRFESFFTQLYSVT 111
+ L +Y C+ ED + + + + FE FF L+
Sbjct: 77 SDQTSLEIYEYQ----GCQAAEDLLQGYEGEILSNGNDQRSVNIRGRLFERFFVLLHITN 132
Query: 112 LASCNELICKDFFLSMEGNQFGLFATSTAQIHDAP--------TTGRAIQGVPF--IEKI 161
+A+ E + ++ L + + + S A + D P ++ P +E
Sbjct: 133 VAANGEHLNRECSLFTDDCR-CVIVGSAAYLPDEPHPPFFEVYRNSESVTPNPRSPLEDY 191
Query: 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLV 221
+ H++ L G + D + F D + L+HN G++LY ++LAI+S++ QTIH+ QV G +
Sbjct: 192 SLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNILAILSVQQQTIHVFQVTPEGTFI 251
Query: 222 DVRTIGSFCREDDELFLISN-SQSLATSERSRLNPFPGNQVGNGHNQVNQDDSFLSGIKQ 280
DVRTIG FC EDD L + + + S+ NPF D F++ +K
Sbjct: 252 DVRTIGRFCYEDDLLTVSAVFPEVQRDSQTGMANPF--------------RDPFINSLKH 297
Query: 281 RLLSFIFQGMWNEETDQAMSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVS 340
RLL ++++ E D + K++FF +F L +WK+Q LD +HL IK+ S D
Sbjct: 298 RLLVYLWR---RAEQDGSAMAKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTSEDVVTL 354
Query: 341 RNVD-HHPAFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHS 399
R D +FF VYNM TTEV+A ++N+++EL LFE FCD F + +S + F S S
Sbjct: 355 RVTDPSQASFFVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNATLHS-EVQFPCSAS 413
Query: 400 NNVYALEQLRSIKN-----KGGSFSQFVKKMMASLPFGCQSQSPSPYFDQSLFRYDEKLI 454
+N +A + R K+ K G ++ V++++ LP QS S SPY D SLF YD+K +
Sbjct: 414 SNNFARQIQRRFKDTIINAKYGGHTEAVRRLLGQLPISAQSYSGSPYLDLSLFSYDDKWV 473
Query: 455 SATDRHRQSTDHPIKFISRRPPYTLKFKIKPGPEAGTIDGRTKRISSFLFHPFLPLALSI 514
S +R + DHPI+F +R LKF+I+ G I+ +R+ +F FHPF P A+S+
Sbjct: 474 SVMERPKTCGDHPIRFYARDSGL-LKFEIQAGLLGRPINHTVRRLVAFTFHPFEPFAISV 532
Query: 515 QQTLFLQPSVVNIHFR 530
Q+T VVN H R
Sbjct: 533 QRT--NAEYVVNFHMR 546
>sp|O74946|DPOA2_SCHPO DNA polymerase alpha subunit B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=pol12 PE=1 SV=1
Length = 574
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 285 FIFQGMWNEETDQAMS-LKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNV 343
+I G W+ D + S LK + ++ VDL+I FLD +H+LI+ G++ G + ++
Sbjct: 307 YIASGPWSLRDDLSFSPLKSMISYVNKNPVDLVILCGPFLDINHILIRTGNITGTSATSL 366
Query: 344 DH 345
+
Sbjct: 367 EE 368
>sp|O05242|O16G3_BACSU Probable oligo-1,6-glucosidase 3 OS=Bacillus subtilis (strain 168)
GN=yugT PE=3 SV=2
Length = 554
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 256 FPGNQVGNGHNQVNQDDSFLSGIKQRLLSFIFQ----GMWNEETDQAMSLK--KKFFFHF 309
+P VG + ++ + +G K + S IFQ G+W+ E ++++ + K+ +
Sbjct: 249 YPIMTVGEANGVAAKEAADWAGEKNGIFSMIFQFEHLGLWDVEINESIDIVAFKRILTDW 308
Query: 310 QDYVDLIIWKVQFLDRH 326
QD ++ I W F++ H
Sbjct: 309 QDSLEGIGWNALFMENH 325
>sp|Q8D2H9|MINC_WIGBR Probable septum site-determining protein MinC OS=Wigglesworthia
glossinidia brevipalpis GN=minC PE=3 SV=1
Length = 243
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 372 YFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKNKGGSFSQFVKKMMASLPF 431
YF+F K C F + N L + N+Y ++IKNK +FS F KKM +
Sbjct: 12 YFMFNKVCLKFKIKNFNILVIYLYDIKEKNIY-----KTIKNKIKNFSYFFKKMPCIINI 66
Query: 432 GCQSQSPSPYFDQSLFRYDEKLIS 455
S+ DQ ++Y K +S
Sbjct: 67 KYLSEE-----DQYFWKYFHKKLS 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195,598,124
Number of Sequences: 539616
Number of extensions: 8184838
Number of successful extensions: 20707
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 20684
Number of HSP's gapped (non-prelim): 9
length of query: 531
length of database: 191,569,459
effective HSP length: 122
effective length of query: 409
effective length of database: 125,736,307
effective search space: 51426149563
effective search space used: 51426149563
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)