Query 009589
Match_columns 531
No_of_seqs 75 out of 77
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 08:34:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009589.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009589hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3scy_A Hypothetical bacterial 93.8 4.3 0.00015 38.9 18.4 133 52-226 160-302 (361)
2 3u4y_A Uncharacterized protein 93.1 1.3 4.6E-05 41.5 13.3 125 52-228 133-263 (331)
3 3u4y_A Uncharacterized protein 92.9 0.75 2.6E-05 43.3 11.2 115 53-216 182-304 (331)
4 3hfq_A Uncharacterized protein 92.7 5.5 0.00019 37.9 17.2 131 52-226 146-281 (347)
5 3hfq_A Uncharacterized protein 92.4 4.2 0.00014 38.7 15.9 131 53-228 193-330 (347)
6 3scy_A Hypothetical bacterial 92.2 4.7 0.00016 38.7 16.0 127 53-224 217-346 (361)
7 1ri6_A Putative isomerase YBHE 91.2 4.9 0.00017 37.3 14.5 121 52-224 43-168 (343)
8 1l0q_A Surface layer protein; 91.2 5 0.00017 38.5 14.9 119 52-227 37-157 (391)
9 2vdu_B TRNA (guanine-N(7)-)-me 90.1 5.1 0.00018 40.1 14.5 124 53-227 202-352 (450)
10 1ri6_A Putative isomerase YBHE 89.6 6.7 0.00023 36.3 13.9 128 53-226 184-319 (343)
11 1jof_A Carboxy-CIS,CIS-muconat 89.5 5.1 0.00018 39.0 13.6 127 53-217 199-342 (365)
12 3vgz_A Uncharacterized protein 89.5 9.6 0.00033 35.6 15.0 77 124-228 236-314 (353)
13 1l0q_A Surface layer protein; 88.7 10 0.00035 36.3 14.9 114 52-222 121-238 (391)
14 2j04_A TAU60, YPL007P, hypothe 88.4 3.4 0.00012 45.6 12.5 122 52-227 135-263 (588)
15 4ery_A WD repeat-containing pr 86.6 14 0.00047 34.5 14.1 117 47-214 193-310 (312)
16 1jof_A Carboxy-CIS,CIS-muconat 86.6 10 0.00035 36.9 13.6 138 48-226 42-186 (365)
17 1nir_A Nitrite reductase; hemo 86.6 6.4 0.00022 41.7 13.0 81 50-179 182-266 (543)
18 1xfd_A DIP, dipeptidyl aminope 86.4 7.6 0.00026 41.1 13.5 26 52-77 178-203 (723)
19 2gop_A Trilobed protease; beta 86.1 22 0.00074 33.5 15.3 50 124-173 109-164 (347)
20 2hqs_A Protein TOLB; TOLB, PAL 85.8 13 0.00044 37.4 14.3 76 52-173 272-347 (415)
21 4a11_B DNA excision repair pro 84.5 10 0.00036 35.9 12.3 27 52-78 192-218 (408)
22 3vgz_A Uncharacterized protein 84.3 26 0.0009 32.6 15.3 125 53-228 95-226 (353)
23 2ecf_A Dipeptidyl peptidase IV 84.2 9.8 0.00034 40.4 13.1 74 121-219 290-370 (741)
24 2ojh_A Uncharacterized protein 82.2 25 0.00084 31.3 13.2 70 125-218 135-206 (297)
25 4h5i_A Guanine nucleotide-exch 81.8 41 0.0014 32.9 16.2 26 52-77 139-165 (365)
26 3bws_A Protein LP49; two-domai 81.4 40 0.0014 32.6 16.7 121 53-215 309-431 (433)
27 2z3z_A Dipeptidyl aminopeptida 81.3 28 0.00097 36.7 15.3 32 124-171 263-294 (706)
28 2ojh_A Uncharacterized protein 81.0 10 0.00036 33.8 10.2 84 52-173 178-261 (297)
29 4h5i_A Guanine nucleotide-exch 80.8 27 0.00092 34.2 14.0 37 42-79 11-53 (365)
30 2aq5_A Coronin-1A; WD40 repeat 80.3 33 0.0011 33.3 14.3 121 51-225 181-309 (402)
31 3fm0_A Protein CIAO1; WDR39,SG 79.9 37 0.0013 32.6 14.4 29 48-77 18-46 (345)
32 3vu4_A KMHSV2; beta-propeller 79.1 27 0.00092 33.9 13.3 47 162-216 82-128 (355)
33 2ynn_A Coatomer subunit beta'; 78.1 45 0.0016 31.2 14.2 108 52-216 19-128 (304)
34 3mmy_A MRNA export factor; mRN 77.9 44 0.0015 30.9 13.9 51 160-217 150-200 (368)
35 1gxr_A ESG1, transducin-like e 77.9 32 0.0011 31.5 12.7 116 52-223 103-220 (337)
36 3azo_A Aminopeptidase; POP fam 77.6 16 0.00054 38.3 11.8 35 125-172 194-229 (662)
37 3azo_A Aminopeptidase; POP fam 77.5 26 0.00088 36.7 13.4 81 124-219 135-229 (662)
38 1r5m_A SIR4-interacting protei 77.5 49 0.0017 31.3 14.5 24 51-75 113-136 (425)
39 3dw8_B Serine/threonine-protei 77.2 16 0.00053 35.6 10.9 28 48-77 287-314 (447)
40 3fm0_A Protein CIAO1; WDR39,SG 76.8 27 0.00093 33.5 12.4 25 52-77 67-91 (345)
41 1pby_B Quinohemoprotein amine 76.8 45 0.0016 30.5 13.8 128 53-227 40-173 (337)
42 3zwl_B Eukaryotic translation 76.6 48 0.0016 30.7 14.7 111 51-216 37-151 (369)
43 1nir_A Nitrite reductase; hemo 76.3 37 0.0013 35.9 14.2 25 53-77 228-256 (543)
44 3mkq_A Coatomer beta'-subunit; 75.8 20 0.00068 38.2 12.1 50 159-214 449-502 (814)
45 3pe7_A Oligogalacturonate lyas 75.3 35 0.0012 32.5 12.7 37 125-182 87-123 (388)
46 1k32_A Tricorn protease; prote 75.3 27 0.00093 39.5 13.7 18 50-67 56-73 (1045)
47 3bws_A Protein LP49; two-domai 74.7 63 0.0022 31.2 16.9 121 53-223 218-340 (433)
48 1sq9_A Antiviral protein SKI8; 74.0 45 0.0015 31.7 13.0 27 51-77 238-266 (397)
49 4a5s_A Dipeptidyl peptidase 4 74.0 13 0.00043 40.4 10.1 25 53-77 177-201 (740)
50 1qks_A Cytochrome CD1 nitrite 73.9 34 0.0012 36.8 13.4 23 53-75 246-272 (567)
51 2vdu_B TRNA (guanine-N(7)-)-me 73.8 26 0.00088 34.9 11.7 27 51-77 107-133 (450)
52 3vu4_A KMHSV2; beta-propeller 73.2 46 0.0016 32.2 13.1 27 51-77 200-226 (355)
53 2pm7_B Protein transport prote 72.8 33 0.0011 32.0 11.6 24 53-77 16-39 (297)
54 3o4h_A Acylamino-acid-releasin 72.6 8.5 0.00029 39.9 8.1 33 123-174 199-231 (582)
55 3ow8_A WD repeat-containing pr 72.4 48 0.0016 31.6 12.8 112 52-221 170-283 (321)
56 3pe7_A Oligogalacturonate lyas 72.3 47 0.0016 31.6 12.7 34 125-174 244-277 (388)
57 1qks_A Cytochrome CD1 nitrite 72.1 62 0.0021 34.8 14.9 33 195-228 352-385 (567)
58 3ow8_A WD repeat-containing pr 71.3 44 0.0015 31.9 12.3 25 52-77 212-236 (321)
59 3jrp_A Fusion protein of prote 71.2 36 0.0012 31.7 11.4 24 53-77 18-41 (379)
60 4aow_A Guanine nucleotide-bind 71.2 58 0.002 29.9 12.7 24 53-77 222-245 (340)
61 3c5m_A Oligogalacturonate lyas 69.3 13 0.00043 35.4 7.9 14 160-173 319-332 (396)
62 1erj_A Transcriptional repress 67.9 87 0.003 30.5 13.9 25 52-77 262-286 (393)
63 1jmx_B Amine dehydrogenase; ox 67.8 71 0.0024 29.5 12.6 133 54-227 155-335 (349)
64 4g56_B MGC81050 protein; prote 67.5 21 0.00071 34.8 9.2 17 53-69 49-65 (357)
65 3gre_A Serine/threonine-protei 66.4 98 0.0034 30.0 14.7 129 52-223 117-251 (437)
66 1erj_A Transcriptional repress 65.9 1E+02 0.0035 30.0 14.9 113 52-221 129-242 (393)
67 2mad_H Methylamine dehydrogena 65.7 1.1E+02 0.0039 30.4 15.5 61 162-229 299-363 (373)
68 2bkl_A Prolyl endopeptidase; m 65.4 57 0.0019 34.9 12.9 57 160-219 294-352 (695)
69 4gqb_B Methylosome protein 50; 65.3 1E+02 0.0035 29.9 14.3 52 161-219 149-203 (344)
70 2hqs_A Protein TOLB; TOLB, PAL 64.6 26 0.00088 35.1 9.4 33 123-173 358-390 (415)
71 2ecf_A Dipeptidyl peptidase IV 63.5 49 0.0017 35.0 11.8 28 51-78 41-73 (741)
72 3sfz_A APAF-1, apoptotic pepti 62.9 1.2E+02 0.004 34.4 15.3 25 52-77 663-687 (1249)
73 4aez_A CDC20, WD repeat-contai 62.7 1.2E+02 0.0039 29.5 13.9 122 52-226 223-345 (401)
74 2pbi_B Guanine nucleotide-bind 62.5 1.1E+02 0.0037 29.5 13.3 117 50-221 110-233 (354)
75 2xdw_A Prolyl endopeptidase; a 62.1 1E+02 0.0035 32.9 14.2 76 125-220 292-371 (710)
76 3vl1_A 26S proteasome regulato 60.9 1.1E+02 0.0039 29.1 13.0 25 52-77 145-169 (420)
77 1pgu_A Actin interacting prote 60.4 96 0.0033 31.3 12.8 120 51-225 165-291 (615)
78 3dw8_B Serine/threonine-protei 60.1 49 0.0017 32.0 10.2 25 51-77 182-206 (447)
79 3o4h_A Acylamino-acid-releasin 59.1 1.5E+02 0.0052 30.4 14.4 31 48-78 23-53 (582)
80 3sfz_A APAF-1, apoptotic pepti 58.7 1.1E+02 0.0038 34.6 14.2 57 159-225 721-782 (1249)
81 2iwa_A Glutamine cyclotransfer 58.3 10 0.00034 37.4 4.9 73 162-239 45-122 (266)
82 3zwl_B Eukaryotic translation 57.6 1.2E+02 0.004 28.0 15.2 128 52-223 121-255 (369)
83 1yr2_A Prolyl oligopeptidase; 57.1 1.5E+02 0.0052 31.9 14.5 72 127-219 324-396 (741)
84 3mkq_A Coatomer beta'-subunit; 56.6 90 0.0031 33.1 12.4 112 53-221 20-133 (814)
85 4a11_B DNA excision repair pro 56.5 1.3E+02 0.0045 28.2 12.5 28 49-77 46-74 (408)
86 4g56_B MGC81050 protein; prote 54.7 37 0.0013 33.0 8.4 25 53-77 233-257 (357)
87 1gxr_A ESG1, transducin-like e 54.6 1.3E+02 0.0043 27.4 14.5 26 50-77 55-80 (337)
88 2xdw_A Prolyl endopeptidase; a 54.1 1E+02 0.0036 32.9 12.4 31 124-170 238-268 (710)
89 1pgu_A Actin interacting prote 52.6 1.9E+02 0.0065 29.0 13.5 113 51-221 211-332 (615)
90 4gqb_B Methylosome protein 50; 52.4 59 0.002 31.7 9.4 24 53-77 134-157 (344)
91 1yfq_A Cell cycle arrest prote 52.0 94 0.0032 28.6 10.3 25 52-77 17-41 (342)
92 4ggc_A P55CDC, cell division c 50.3 1.4E+02 0.005 26.9 14.8 105 53-214 32-136 (318)
93 3gre_A Serine/threonine-protei 50.1 1.9E+02 0.0064 28.0 14.0 111 54-223 178-298 (437)
94 4e54_B DNA damage-binding prot 49.8 83 0.0028 31.1 10.2 26 52-77 256-281 (435)
95 3lrv_A PRE-mRNA-splicing facto 49.6 38 0.0013 32.2 7.4 23 53-77 221-243 (343)
96 4ery_A WD repeat-containing pr 49.3 1.6E+02 0.0055 27.0 15.1 26 51-77 28-53 (312)
97 3jro_A Fusion protein of prote 48.4 1.2E+02 0.0041 33.0 11.9 25 52-77 15-39 (753)
98 3iuj_A Prolyl endopeptidase; h 48.1 2.2E+02 0.0077 30.5 13.9 55 160-219 304-360 (693)
99 3ei3_B DNA damage-binding prot 45.4 99 0.0034 29.4 9.6 133 53-217 211-383 (383)
100 2z3z_A Dipeptidyl aminopeptida 44.1 71 0.0024 33.6 9.0 32 124-172 406-437 (706)
101 1vyh_C Platelet-activating fac 44.1 1.5E+02 0.0051 29.2 11.0 25 52-77 114-138 (410)
102 1vyh_C Platelet-activating fac 44.1 1.4E+02 0.0047 29.4 10.7 24 53-77 157-180 (410)
103 3vl1_A 26S proteasome regulato 43.9 2.2E+02 0.0075 27.1 12.3 26 51-77 252-277 (420)
104 3dwl_C Actin-related protein 2 43.7 1.5E+02 0.0053 27.8 10.6 24 53-77 153-176 (377)
105 3dsm_A Uncharacterized protein 43.2 1.9E+02 0.0064 27.7 11.3 119 53-227 178-311 (328)
106 2ece_A 462AA long hypothetical 42.9 83 0.0028 33.7 9.3 106 53-189 327-446 (462)
107 2aq5_A Coronin-1A; WD40 repeat 42.5 2.4E+02 0.0081 27.1 13.8 125 51-228 225-353 (402)
108 3dm0_A Maltose-binding peripla 42.0 2.9E+02 0.0098 29.2 13.5 25 52-77 478-502 (694)
109 1k8k_C P40, ARP2/3 complex 41 42.0 2.1E+02 0.0073 26.4 13.9 26 51-77 101-126 (372)
110 3i2n_A WD repeat-containing pr 41.3 72 0.0025 29.4 7.7 28 51-78 264-291 (357)
111 1nr0_A Actin interacting prote 40.6 1.3E+02 0.0043 31.6 10.3 109 53-185 66-194 (611)
112 1k32_A Tricorn protease; prote 40.5 1E+02 0.0035 34.8 10.1 26 51-77 383-408 (1045)
113 3mbr_X Glutamine cyclotransfer 40.2 71 0.0024 31.1 7.7 61 162-227 44-104 (243)
114 1got_B GT-beta; complex (GTP-b 38.6 2.6E+02 0.0088 26.4 14.4 26 51-77 102-127 (340)
115 3jrp_A Fusion protein of prote 36.9 2.5E+02 0.0087 25.8 13.9 32 196-228 268-299 (379)
116 3f3f_A Nucleoporin SEH1; struc 36.9 2.3E+02 0.0079 25.3 14.2 26 52-78 63-90 (351)
117 3sjl_D Methylamine dehydrogena 36.4 1E+02 0.0035 31.8 8.6 39 123-180 141-179 (386)
118 3v7d_B Cell division control p 31.6 3.7E+02 0.013 26.1 14.2 25 52-77 316-340 (464)
119 1pby_B Quinohemoprotein amine 31.1 3E+02 0.01 24.9 10.2 84 124-228 39-135 (337)
120 4aow_A Guanine nucleotide-bind 31.0 34 0.0012 31.5 3.6 25 52-77 312-336 (340)
121 3frx_A Guanine nucleotide-bind 31.0 34 0.0011 32.5 3.6 25 52-77 292-316 (319)
122 4ggc_A P55CDC, cell division c 30.7 3E+02 0.01 24.7 12.3 28 49-77 153-180 (318)
123 2w18_A PALB2, fancn, partner a 30.7 32 0.0011 35.5 3.6 24 52-76 332-355 (356)
124 3nol_A Glutamine cyclotransfer 30.6 1E+02 0.0035 30.3 7.1 61 162-227 66-126 (262)
125 3lrv_A PRE-mRNA-splicing facto 30.4 45 0.0015 31.7 4.4 26 52-77 266-291 (343)
126 3odt_A Protein DOA1; ubiquitin 27.9 3.3E+02 0.011 24.3 10.9 56 162-224 247-303 (313)
127 4aez_A CDC20, WD repeat-contai 27.9 4.1E+02 0.014 25.5 14.5 115 49-219 94-208 (401)
128 4gq1_A NUP37; propeller, trans 27.9 35 0.0012 33.6 3.2 26 53-80 366-391 (393)
129 2ynn_A Coatomer subunit beta'; 27.4 3.7E+02 0.013 24.8 13.6 104 51-205 189-301 (304)
130 4gga_A P55CDC, cell division c 26.6 4.5E+02 0.015 25.5 12.2 29 48-77 232-260 (420)
131 1sq9_A Antiviral protein SKI8; 26.3 4E+02 0.014 24.9 15.7 80 123-222 238-327 (397)
132 3v7d_B Cell division control p 25.9 4.6E+02 0.016 25.4 13.2 110 50-216 272-381 (464)
133 1r5m_A SIR4-interacting protei 25.7 42 0.0014 31.7 3.3 28 50-78 398-425 (425)
134 3dr2_A Exported gluconolactona 25.2 4.1E+02 0.014 24.6 14.6 154 54-225 93-295 (305)
135 1yr2_A Prolyl oligopeptidase; 25.1 2.1E+02 0.0071 30.8 9.0 35 125-175 169-203 (741)
136 2ymu_A WD-40 repeat protein; u 24.8 42 0.0014 33.9 3.3 24 53-77 515-538 (577)
137 3elq_A Arylsulfate sulfotransf 24.4 1.8E+02 0.0061 31.9 8.2 119 98-229 229-394 (571)
138 3i2n_A WD repeat-containing pr 22.9 67 0.0023 29.6 4.0 27 51-77 23-52 (357)
139 2xdp_A Lysine-specific demethy 22.7 94 0.0032 27.6 4.7 64 157-223 29-106 (123)
140 2ymu_A WD-40 repeat protein; u 22.2 57 0.0019 33.0 3.6 25 53-78 64-88 (577)
141 3odt_A Protein DOA1; ubiquitin 21.8 4.2E+02 0.015 23.5 13.5 58 159-223 203-261 (313)
No 1
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.78 E-value=4.3 Score=38.92 Aligned_cols=133 Identities=16% Similarity=0.177 Sum_probs=74.2
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCce
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgr 131 (531)
-.|+|||++|++-+.....+.||+....+...+ .+ ..... ...-...+..+.. . + ...|..||+
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~-~~----~l~~~--------~~~~~~~~~~~~~-~-~-~~~~spdg~ 223 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADN-KE----KFLTK--------GTPEAFKVAPGSG-P-R-HLIFNSDGK 223 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTT-CC----CCEEE--------EEEEEEECCTTCC-E-E-EEEECTTSS
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCccc-cc----ceeec--------ccccceecCCCCC-C-e-EEEEcCCCC
Confidence 479999999988887788899998862110000 00 00000 0001112222221 1 1 356789999
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccc--------eEEeeecceeeeecceeeeee
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHND--------FINLAHNMGVFLYDDLLAIVS 203 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D--------~I~LsHN~Gv~L~~dlLaILS 203 (531)
++.+++.. +=++.++|+.+|.+.-...+... -|.++.+ +..|++..
T Consensus 224 ~l~v~~~~--------------------~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spd------g~~l~v~~ 277 (361)
T 3scy_A 224 FAYLINEI--------------------GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPD------GKYLYASN 277 (361)
T ss_dssp EEEEEETT--------------------TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTT------SSEEEEEE
T ss_pred EEEEEcCC--------------------CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCC------CCEEEEEC
Confidence 98875422 12478889989876433333221 2333332 33455655
Q ss_pred ec-ccEEEEEEEc-cCCeEEEeeee
Q 009589 204 LR-YQTIHILQVR-DLGNLVDVRTI 226 (531)
Q Consensus 204 ~q-~QtIhi~qI~-~~G~fv~vrtI 226 (531)
.. .-+|.||.+. .+|++..+..+
T Consensus 278 ~~~~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 278 RLKADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp CSSSCEEEEEEECTTTCCEEEEEEE
T ss_pred CCCCCEEEEEEEcCCCCcEEEeeEe
Confidence 55 6899999996 46887666554
No 2
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.13 E-value=1.3 Score=41.53 Aligned_cols=125 Identities=10% Similarity=0.063 Sum_probs=73.6
Q ss_pred eeeCCCCCeEEEeeCCCce-EEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCc
Q 009589 52 RKFTDDGQYLISFSRNHQD-LIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGN 130 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~-L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dg 130 (531)
-.|+|||++|++-+.+... +.+|+....+ . +. ... ...+..+... ...-|..||
T Consensus 133 ~~~spdg~~l~~~~~~~~~~i~~~~~~~~g------~-----------~~----~~~-~~~~~~~~~~---~~~~~spdg 187 (331)
T 3u4y_A 133 IAISPNGNGLILIDRSSANTVRRFKIDADG------V-----------LF----DTG-QEFISGGTRP---FNITFTPDG 187 (331)
T ss_dssp EEECTTSSCEEEEEETTTTEEEEEEECTTC------C-----------EE----EEE-EEEECSSSSE---EEEEECTTS
T ss_pred eEECCCCCEEEEEecCCCceEEEEEECCCC------c-----------Ee----ecC-CccccCCCCc---cceEECCCC
Confidence 3699999988877776566 9999986211 0 00 010 0111222221 345678899
Q ss_pred eEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeE---eeeeeeccceEEeeecceeeee--cceeeeeeec
Q 009589 131 QFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVV---LDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLR 205 (531)
Q Consensus 131 ryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v---~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q 205 (531)
+++++++.. +-+++++|+++|.+ ..+.. .. ..-.++.+. +..|.+.+-.
T Consensus 188 ~~l~v~~~~--------------------~~~v~v~d~~~~~~~~~~~~~~--~~----~~~~~~~~spdg~~l~v~~~~ 241 (331)
T 3u4y_A 188 NFAFVANLI--------------------GNSIGILETQNPENITLLNAVG--TN----NLPGTIVVSRDGSTVYVLTES 241 (331)
T ss_dssp SEEEEEETT--------------------TTEEEEEECSSTTSCEEEEEEE--CS----SCCCCEEECTTSSEEEEECSS
T ss_pred CEEEEEeCC--------------------CCeEEEEECCCCcccceeeecc--CC----CCCceEEECCCCCEEEEEEcC
Confidence 998886432 12588999999987 43332 21 122244444 3456666666
Q ss_pred ccEEEEEEEccCCeEEEeeeeCC
Q 009589 206 YQTIHILQVRDLGNLVDVRTIGS 228 (531)
Q Consensus 206 ~QtIhi~qI~~~G~fv~vrtIG~ 228 (531)
.-+|+++.+. +|+...+.++..
T Consensus 242 ~~~i~~~d~~-~~~~~~~~~~~~ 263 (331)
T 3u4y_A 242 TVDVFNFNQL-SGTLSFVKSFGH 263 (331)
T ss_dssp EEEEEEEETT-TTEEEEEEEEEC
T ss_pred CCEEEEEECC-CCceeeeccccc
Confidence 7789988866 588866666544
No 3
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=92.95 E-value=0.75 Score=43.27 Aligned_cols=115 Identities=14% Similarity=0.074 Sum_probs=67.3
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCceE
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgry 132 (531)
.|+|||++|++-+.....|.||+..... . .+....+.. ++.. ....|..||++
T Consensus 182 ~~spdg~~l~v~~~~~~~v~v~d~~~~~-------------~---------~~~~~~~~~--~~~~---~~~~~spdg~~ 234 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIGNSIGILETQNPE-------------N---------ITLLNAVGT--NNLP---GTIVVSRDGST 234 (331)
T ss_dssp EECTTSSEEEEEETTTTEEEEEECSSTT-------------S---------CEEEEEEEC--SSCC---CCEEECTTSSE
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCCCc-------------c---------cceeeeccC--CCCC---ceEEECCCCCE
Confidence 5899999988888878888888865100 0 001122221 1111 13457889999
Q ss_pred EEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccc------eEEeeecceeee--ecceeeeeee
Q 009589 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHND------FINLAHNMGVFL--YDDLLAIVSL 204 (531)
Q Consensus 133 vivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D------~I~LsHN~Gv~L--~~dlLaILS~ 204 (531)
+.+++.. +=+++++|+++|.+.--..+... .+..+ .++.+ -+..|+|-+-
T Consensus 235 l~v~~~~--------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 235 VYVLTES--------------------TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGA--NQMALNKTETKLFISAN 292 (331)
T ss_dssp EEEECSS--------------------EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTC--CCEEECTTSSEEEEEET
T ss_pred EEEEEcC--------------------CCEEEEEECCCCceeeecccccccccCCCCcccc--cceEECCCCCEEEEecC
Confidence 8885432 22488899999998333322221 00000 11222 2456777777
Q ss_pred cccEEEEEEEcc
Q 009589 205 RYQTIHILQVRD 216 (531)
Q Consensus 205 q~QtIhi~qI~~ 216 (531)
...+|.|+.+..
T Consensus 293 ~~~~v~v~d~~~ 304 (331)
T 3u4y_A 293 ISRELKVFTISG 304 (331)
T ss_dssp TTTEEEEEETTS
T ss_pred CCCcEEEEEecC
Confidence 778999999863
No 4
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.74 E-value=5.5 Score=37.85 Aligned_cols=131 Identities=14% Similarity=0.168 Sum_probs=67.9
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCce
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgr 131 (531)
=.|+|||+ |++-+.....+.+|+... + +.. +..-...+..+... + ..-|..||+
T Consensus 146 ~~~spdg~-l~v~~~~~~~v~~~~~~~-~-----g~~----------------~~~~~~~~~~g~~p--~-~~~~spdg~ 199 (347)
T 3hfq_A 146 TDLTPDNR-LAVIDLGSDKVYVYNVSD-A-----GQL----------------SEQSVLTMEAGFGP--R-HLVFSPDGQ 199 (347)
T ss_dssp EEECTTSC-EEEEETTTTEEEEEEECT-T-----SCE----------------EEEEEEECCTTCCE--E-EEEECTTSS
T ss_pred EEECCCCc-EEEEeCCCCEEEEEEECC-C-----CcE----------------EEeeeEEcCCCCCC--c-eEEECCCCC
Confidence 36899999 776666677888888751 0 100 01111122222111 1 256789999
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceE---Eeeecceeeee--cceeeeeeecc
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFI---NLAHNMGVFLY--DDLLAIVSLRY 206 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I---~LsHN~Gv~L~--~dlLaILS~q~ 206 (531)
++++++... ..+.++-++..+|.+.-...+...-- ....-.++.+- +..|.|.+...
T Consensus 200 ~l~v~~~~~------------------~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~ 261 (347)
T 3hfq_A 200 YAFLAGELS------------------SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY 261 (347)
T ss_dssp EEEEEETTT------------------TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT
T ss_pred EEEEEeCCC------------------CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC
Confidence 988854331 12333334444677543332221100 00001123232 34566777778
Q ss_pred cEEEEEEEccCCeEEEeeee
Q 009589 207 QTIHILQVRDLGNLVDVRTI 226 (531)
Q Consensus 207 QtIhi~qI~~~G~fv~vrtI 226 (531)
.+|.+|.+.++|.+..+.++
T Consensus 262 ~~v~v~~~~~~g~~~~~~~~ 281 (347)
T 3hfq_A 262 NTLAVFAVTADGHLTLIQQI 281 (347)
T ss_dssp TEEEEEEECGGGCEEEEEEE
T ss_pred CEEEEEEECCCCcEEEeEEE
Confidence 89999999867876666554
No 5
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.44 E-value=4.2 Score=38.68 Aligned_cols=131 Identities=14% Similarity=0.090 Sum_probs=74.6
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCC---eeeeeeEEEEecC
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCN---ELICKDFFLSMEG 129 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~---e~L~refsLft~d 129 (531)
.|+|||++|++-+.....+.||++...+ +. ++....+.....+ ..-. .-..|..|
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~-----g~----------------~~~~~~~~~~~~~~~~~~~~-~~i~~spd 250 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDTQT-----GA----------------FTQLGIVKTIPADYTAHNGA-AAIRLSHD 250 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTT-----TE----------------EEEEEEEESSCTTCCSCCEE-EEEEECTT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCC-----Cc----------------eEEeeeeeecCCCCCCCCcc-eeEEECCC
Confidence 6999999998888888899999887311 00 0011111111111 0111 13457889
Q ss_pred ceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEcc-CCeEeeeeeeccceEEeeecceeeee--cceeeeeeecc
Q 009589 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLE-DGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRY 206 (531)
Q Consensus 130 gryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~-~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q~ 206 (531)
|+++.++... +=++.++|+. +|.+.-...+... -..-.++.+- +..|++-+-..
T Consensus 251 G~~l~v~~~~--------------------~~~v~v~~~~~~g~~~~~~~~~~~---~~~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 251 GHFLYVSNRG--------------------YNTLAVFAVTADGHLTLIQQISTE---GDFPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp SCEEEEEEET--------------------TTEEEEEEECGGGCEEEEEEEECS---SSCCCEEEECTTSSEEEEEETTT
T ss_pred CCEEEEEeCC--------------------CCEEEEEEECCCCcEEEeEEEecC---CCCcCeEEECCCCCEEEEEEcCC
Confidence 9998875432 1146777775 4533222222210 0112344444 44677777777
Q ss_pred cEEEEEEEc-cCCeEEEeeeeCC
Q 009589 207 QTIHILQVR-DLGNLVDVRTIGS 228 (531)
Q Consensus 207 QtIhi~qI~-~~G~fv~vrtIG~ 228 (531)
.+|.+|.+. ++|++..+...+.
T Consensus 308 ~~v~v~~~d~~tg~l~~~~~~~~ 330 (347)
T 3hfq_A 308 DNATLYARDLTSGKLSLLQKDVT 330 (347)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEE
T ss_pred CcEEEEEEeCCCCeEEeccccee
Confidence 899999996 4699988876543
No 6
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.18 E-value=4.7 Score=38.66 Aligned_cols=127 Identities=12% Similarity=0.141 Sum_probs=70.1
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCceE
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgry 132 (531)
.|+|||++|.+-+.....|.||++.. +.. +....+.....+..-.. ..-|..||++
T Consensus 217 ~~spdg~~l~v~~~~~~~v~v~~~~~-------g~~----------------~~~~~~~~~~~~~~~~~-~i~~spdg~~ 272 (361)
T 3scy_A 217 IFNSDGKFAYLINEIGGTVIAFRYAD-------GML----------------DEIQTVAADTVNAQGSG-DIHLSPDGKY 272 (361)
T ss_dssp EECTTSSEEEEEETTTCEEEEEEEET-------TEE----------------EEEEEEESCSSCCCCEE-EEEECTTSSE
T ss_pred EEcCCCCEEEEEcCCCCeEEEEEecC-------Cce----------------EEeEEEecCCCCCCCcc-cEEECCCCCE
Confidence 69999999888887778899998861 100 01111111111100011 3457889999
Q ss_pred EEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeeeeeecccEEE
Q 009589 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTIH 210 (531)
Q Consensus 133 vivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q~QtIh 210 (531)
+.++.... -..+.++-+|.++|.+.-...+... ..-.++.+- +..|++-+-..-+|.
T Consensus 273 l~v~~~~~-----------------~~~i~v~~~~~~~g~~~~~~~~~~g----~~~~~~~~spdg~~l~~~~~~~~~v~ 331 (361)
T 3scy_A 273 LYASNRLK-----------------ADGVAIFKVDETNGTLTKVGYQLTG----IHPRNFIITPNGKYLLVACRDTNVIQ 331 (361)
T ss_dssp EEEEECSS-----------------SCEEEEEEECTTTCCEEEEEEEECS----SCCCEEEECTTSCEEEEEETTTTEEE
T ss_pred EEEECCCC-----------------CCEEEEEEEcCCCCcEEEeeEecCC----CCCceEEECCCCCEEEEEECCCCCEE
Confidence 87643220 1123444444467875433333321 111234443 456777776778999
Q ss_pred EEEEc-cCCeEEEee
Q 009589 211 ILQVR-DLGNLVDVR 224 (531)
Q Consensus 211 i~qI~-~~G~fv~vr 224 (531)
+|.+. .+|++..+.
T Consensus 332 v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 332 IFERDQATGLLTDIK 346 (361)
T ss_dssp EEEECTTTCCEEECS
T ss_pred EEEEECCCCcEeecc
Confidence 99996 468876654
No 7
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=91.22 E-value=4.9 Score=37.28 Aligned_cols=121 Identities=21% Similarity=0.182 Sum_probs=69.5
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCce
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgr 131 (531)
=.|+|||++|++-+.+...|.+|.....+ +. .+..-.+.. ++ . =...-|..||+
T Consensus 43 ~~~spdg~~l~~~~~~~~~v~~~~~~~~~-----~~----------------~~~~~~~~~--~~-~--~~~~~~s~dg~ 96 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPEFRVLAYRIAPDD-----GA----------------LTFAAESAL--PG-S--LTHISTDHQGQ 96 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTT-----CC----------------EEEEEEEEC--SS-C--CSEEEECTTSS
T ss_pred EEECCCCCEEEEeecCCCeEEEEEecCCC-----Cc----------------eeecccccc--CC-C--CcEEEEcCCCC
Confidence 36999999999999887899999875100 00 001111111 11 1 12344678999
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCe---EeeeeeeccceEEeeecceeeee--cceeeeeeecc
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGV---VLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRY 206 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~---v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q~ 206 (531)
++++++.. +=++.++|+.+|. +.... ... .+-.++.+- +..|++-+...
T Consensus 97 ~l~~~~~~--------------------~~~i~~~d~~~~~~~~~~~~~--~~~----~~~~~~~~s~dg~~l~~~~~~~ 150 (343)
T 1ri6_A 97 FVFVGSYN--------------------AGNVSVTRLEDGLPVGVVDVV--EGL----DGCHSANISPDNRTLWVPALKQ 150 (343)
T ss_dssp EEEEEETT--------------------TTEEEEEEEETTEEEEEEEEE--CCC----TTBCCCEECTTSSEEEEEEGGG
T ss_pred EEEEEecC--------------------CCeEEEEECCCCccccccccc--cCC----CCceEEEECCCCCEEEEecCCC
Confidence 98876432 1246778885553 22221 111 112233333 34677777677
Q ss_pred cEEEEEEEccCCeEEEee
Q 009589 207 QTIHILQVRDLGNLVDVR 224 (531)
Q Consensus 207 QtIhi~qI~~~G~fv~vr 224 (531)
.+|++|.+..+|++..+.
T Consensus 151 ~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp TEEEEEEECTTSCEEEEE
T ss_pred CEEEEEEecCCCceeeec
Confidence 899999998668776544
No 8
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=91.16 E-value=5 Score=38.54 Aligned_cols=119 Identities=9% Similarity=0.093 Sum_probs=72.1
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCce
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgr 131 (531)
-.|+|||++|++-+.....|.+|.... ++ ....+.. ++ .+ -..-|..||+
T Consensus 37 ~~~s~dg~~l~~~~~~d~~i~v~d~~~-------~~------------------~~~~~~~--~~-~v--~~~~~spdg~ 86 (391)
T 1l0q_A 37 AVISPDGTKVYVANAHSNDVSIIDTAT-------NN------------------VIATVPA--GS-SP--QGVAVSPDGK 86 (391)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEETTT-------TE------------------EEEEEEC--SS-SE--EEEEECTTSS
T ss_pred EEECCCCCEEEEECCCCCeEEEEECCC-------Ce------------------EEEEEEC--CC-Cc--cceEECCCCC
Confidence 369999999876665566788877641 10 1111111 11 11 2445778999
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeeeeeecccEE
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTI 209 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q~QtI 209 (531)
+++++++. +-+++++|+.+|.+.......... .++.+. +..|++.+-...+|
T Consensus 87 ~l~~~~~~--------------------~~~v~v~d~~~~~~~~~~~~~~~~------~~~~~s~dg~~l~~~~~~~~~v 140 (391)
T 1l0q_A 87 QVYVTNMA--------------------SSTLSVIDTTSNTVAGTVKTGKSP------LGLALSPDGKKLYVTNNGDKTV 140 (391)
T ss_dssp EEEEEETT--------------------TTEEEEEETTTTEEEEEEECSSSE------EEEEECTTSSEEEEEETTTTEE
T ss_pred EEEEEECC--------------------CCEEEEEECCCCeEEEEEeCCCCc------ceEEECCCCCEEEEEeCCCCEE
Confidence 98875332 135899999999886655433322 133333 33566666667889
Q ss_pred EEEEEccCCeEEEeeeeC
Q 009589 210 HILQVRDLGNLVDVRTIG 227 (531)
Q Consensus 210 hi~qI~~~G~fv~vrtIG 227 (531)
+++.+. +|+.+..-..|
T Consensus 141 ~~~d~~-~~~~~~~~~~~ 157 (391)
T 1l0q_A 141 SVINTV-TKAVINTVSVG 157 (391)
T ss_dssp EEEETT-TTEEEEEEECC
T ss_pred EEEECC-CCcEEEEEecC
Confidence 999876 47776654444
No 9
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=90.14 E-value=5.1 Score=40.08 Aligned_cols=124 Identities=14% Similarity=0.100 Sum_probs=72.5
Q ss_pred eeCCC---CCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecC
Q 009589 53 KFTDD---GQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEG 129 (531)
Q Consensus 53 KFTpD---G~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~d 129 (531)
.|+|| |++|++=|.| ..|.||...... + . ......+.+...+ .-|. |
T Consensus 202 ~~sp~~~~~~~l~s~~~d-~~i~vwd~~~~~-------~------~------------~~~~~~h~~~v~~---~~~s-d 251 (450)
T 2vdu_B 202 HLIKDSDGHQFIITSDRD-EHIKISHYPQCF-------I------V------------DKWLFGHKHFVSS---ICCG-K 251 (450)
T ss_dssp EEEECTTSCEEEEEEETT-SCEEEEEESCTT-------C------E------------EEECCCCSSCEEE---EEEC-S
T ss_pred EEcCCCCCCcEEEEEcCC-CcEEEEECCCCc-------e------e------------eeeecCCCCceEE---EEEC-C
Confidence 79999 9899888877 568888876110 0 0 0000112222222 2334 8
Q ss_pred ceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeecc---ceEEeeec-----------------
Q 009589 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHN---DFINLAHN----------------- 189 (531)
Q Consensus 130 gryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~---D~I~LsHN----------------- 189 (531)
|++++.|+. +-++.|+|+.+|.......... ......|.
T Consensus 252 ~~~l~s~~~---------------------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (450)
T 2vdu_B 252 DYLLLSAGG---------------------DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAV 310 (450)
T ss_dssp TTEEEEEES---------------------SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCE
T ss_pred CCEEEEEeC---------------------CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEE
Confidence 999887642 2368999999998776655331 00000000
Q ss_pred ceeeee--cceeeeeeecccEEEEEEE--ccCCeEEEeeeeC
Q 009589 190 MGVFLY--DDLLAIVSLRYQTIHILQV--RDLGNLVDVRTIG 227 (531)
Q Consensus 190 ~Gv~L~--~dlLaILS~q~QtIhi~qI--~~~G~fv~vrtIG 227 (531)
.+|... +..|++-+-...+|+||.+ ...|++..+.+|.
T Consensus 311 ~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~ 352 (450)
T 2vdu_B 311 SKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT 352 (450)
T ss_dssp EEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec
Confidence 122222 5567777767899999999 5556776666653
No 10
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.62 E-value=6.7 Score=36.34 Aligned_cols=128 Identities=9% Similarity=0.076 Sum_probs=69.6
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEE-ccC--CCeeeeeeEEEEecC
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVT-LAS--CNELICKDFFLSMEG 129 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~-l~~--~~e~L~refsLft~d 129 (531)
.|+|||++|++-+.....+.+|.....+ +. ++....+. +.. ++..-. ...-|..|
T Consensus 184 ~~~pdg~~l~~~~~~~~~i~~~~~~~~~-----g~----------------~~~~~~~~~~~~~~~~~~~~-~~i~~s~d 241 (343)
T 1ri6_A 184 VFHPNEQYAYCVNELNSSVDVWELKDPH-----GN----------------IECVQTLDMMPENFSDTRWA-ADIHITPD 241 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEESSCTT-----SC----------------CEEEEEEECSCTTCCSCCCE-EEEEECTT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCC-----Cc----------------EEEEeeccccCccccccCCc-cceEECCC
Confidence 4899999998888777889999885211 00 00011111 111 111111 13457889
Q ss_pred ceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEcc--CCeEeeeeeeccceEEeeecceeeee--cceeeeeeec
Q 009589 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLE--DGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLR 205 (531)
Q Consensus 130 gryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~--~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q 205 (531)
|++++++... +=++.++|+. +|...-...+.... .-.++.+- ++.|++-+-.
T Consensus 242 g~~l~v~~~~--------------------~~~i~v~d~~~~~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~ 297 (343)
T 1ri6_A 242 GRHLYACDRT--------------------ASLITVFSVSEDGSVLSKEGFQPTET----QPRGFNVDHSGKYLIAAGQK 297 (343)
T ss_dssp SSEEEEEETT--------------------TTEEEEEEECTTSCCEEEEEEEECSS----SCCCEEECTTSSEEEEECTT
T ss_pred CCEEEEEecC--------------------CCEEEEEEEcCCCCceEEeeeecCCC----ccceEEECCCCCEEEEecCC
Confidence 9998774322 0146777777 45332222222110 01233333 4566666656
Q ss_pred ccEEEEEEEcc-CCeEEEeeee
Q 009589 206 YQTIHILQVRD-LGNLVDVRTI 226 (531)
Q Consensus 206 ~QtIhi~qI~~-~G~fv~vrtI 226 (531)
..+|.||.+.. +|++..+..|
T Consensus 298 ~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 298 SHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp TCEEEEEEEETTTTEEEEEEEE
T ss_pred CCeEEEEEEcCCCceeeEcccc
Confidence 68999999864 5777666654
No 11
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=89.48 E-value=5.1 Score=39.03 Aligned_cols=127 Identities=10% Similarity=0.011 Sum_probs=67.9
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEE-ccCC--Cee-------eeee
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVT-LASC--NEL-------ICKD 122 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~-l~~~--~e~-------L~re 122 (531)
.|||||++|..-+.+...+.||++..-+ +.. .. ....+. ++.+ +.. -..+
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~-----g~~-------~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~ 258 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPAT-----HMP-------VY--------THHSFPLIPPGIPDRDPETGKGLYRAD 258 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTT-----CCE-------EE--------EEEEEESSCTTCCCBCTTTSSBSEEEE
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCCC-----CcE-------EE--------ccceEEcCCCCcCCccccccccccccc
Confidence 6999999998777777788898885100 100 00 001111 1111 111 2344
Q ss_pred EEEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEcc-CCeEeeeee-eccceEEeeecceeeee-----
Q 009589 123 FFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLE-DGVVLDEKV-FHNDFINLAHNMGVFLY----- 195 (531)
Q Consensus 123 fsLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~-~G~v~D~~~-f~~D~I~LsHN~Gv~L~----- 195 (531)
...|..||+++.+++... .. . ..-++.++|+. +|.+.-... ... .-..-.++.+-
T Consensus 259 i~~~spdG~~l~v~~~~~-~~-------------~-~~~~i~v~~~~~~g~~~~~~~~~~~---~~~~~~~~a~sp~~~d 320 (365)
T 1jof_A 259 VCALTFSGKYMFASSRAN-KF-------------E-LQGYIAGFKLRDCGSIEKQLFLSPT---PTSGGHSNAVSPCPWS 320 (365)
T ss_dssp EEEECTTSSEEEEEEEES-ST-------------T-SCCEEEEEEECTTSCEEEEEEEEEC---SSCCTTCCCEEECTTC
T ss_pred EEEECCCCCEEEEECCCC-CC-------------C-CCCeEEEEEECCCCCEEEeeeeeec---CCCCcccceecCCCcC
Confidence 554889999997754431 00 0 11356677775 787543211 110 00011233332
Q ss_pred cceeeeeeecccEEEEEEEccC
Q 009589 196 DDLLAIVSLRYQTIHILQVRDL 217 (531)
Q Consensus 196 ~dlLaILS~q~QtIhi~qI~~~ 217 (531)
+..|++-+-...+|.||.+..+
T Consensus 321 g~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 321 DEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETT
T ss_pred CCEEEEEEcCCCeEEEEEEchh
Confidence 5678877766689999999753
No 12
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=89.45 E-value=9.6 Score=35.64 Aligned_cols=77 Identities=8% Similarity=0.105 Sum_probs=51.0
Q ss_pred EEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeee
Q 009589 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAI 201 (531)
Q Consensus 124 sLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaI 201 (531)
.-+..||+++.+++.. +-+++++|+.+|.+....... +..++.+- ++.|.|
T Consensus 236 ~~~s~dg~~l~~~~~~--------------------~~~v~~~d~~~~~~~~~~~~~-------~~~~~~~s~dg~~l~v 288 (353)
T 3vgz_A 236 ISLDTARQRAFITDSK--------------------AAEVLVVDTRNGNILAKVAAP-------ESLAVLFNPARNEAYV 288 (353)
T ss_dssp EEEETTTTEEEEEESS--------------------SSEEEEEETTTCCEEEEEECS-------SCCCEEEETTTTEEEE
T ss_pred EEECCCCCEEEEEeCC--------------------CCEEEEEECCCCcEEEEEEcC-------CCceEEECCCCCEEEE
Confidence 4567899988775422 125889999999987665542 22345443 345666
Q ss_pred eeecccEEEEEEEccCCeEEEeeeeCC
Q 009589 202 VSLRYQTIHILQVRDLGNLVDVRTIGS 228 (531)
Q Consensus 202 LS~q~QtIhi~qI~~~G~fv~vrtIG~ 228 (531)
.+-...+|+++.+. +|+.+..-..|.
T Consensus 289 ~~~~~~~v~~~d~~-~~~~~~~~~~~~ 314 (353)
T 3vgz_A 289 THRQAGKVSVIDAK-SYKVVKTFDTPT 314 (353)
T ss_dssp EETTTTEEEEEETT-TTEEEEEEECCS
T ss_pred EECCCCeEEEEECC-CCeEEEEEecCC
Confidence 66667899999876 488776655554
No 13
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=88.66 E-value=10 Score=36.29 Aligned_cols=114 Identities=9% Similarity=0.120 Sum_probs=66.7
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCce
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgr 131 (531)
-.|+|||++|++-+.+...|.+|.... +. ....+.. +.. . ....|..||+
T Consensus 121 ~~~s~dg~~l~~~~~~~~~v~~~d~~~-------~~------------------~~~~~~~--~~~-~--~~~~~~~dg~ 170 (391)
T 1l0q_A 121 LALSPDGKKLYVTNNGDKTVSVINTVT-------KA------------------VINTVSV--GRS-P--KGIAVTPDGT 170 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTT-------TE------------------EEEEEEC--CSS-E--EEEEECTTSS
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCC-------Cc------------------EEEEEec--CCC-c--ceEEECCCCC
Confidence 358999998866666667777776541 10 0111111 111 1 3456788999
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeeeeee--ccc
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSL--RYQ 207 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~--q~Q 207 (531)
++++++.. +-+++++|+.+|.+.......... .++.+. +..|++.+- ...
T Consensus 171 ~l~~~~~~--------------------~~~v~~~d~~~~~~~~~~~~~~~~------~~~~~~~~g~~l~~~~~~~~~~ 224 (391)
T 1l0q_A 171 KVYVANFD--------------------SMSISVIDTVTNSVIDTVKVEAAP------SGIAVNPEGTKAYVTNVDKYFN 224 (391)
T ss_dssp EEEEEETT--------------------TTEEEEEETTTTEEEEEEECSSEE------EEEEECTTSSEEEEEEECSSCC
T ss_pred EEEEEeCC--------------------CCEEEEEECCCCeEEEEEecCCCc------cceEECCCCCEEEEEecCcCCC
Confidence 98775332 125899999999876554432211 123332 446666665 567
Q ss_pred EEEEEEEccCCeEEE
Q 009589 208 TIHILQVRDLGNLVD 222 (531)
Q Consensus 208 tIhi~qI~~~G~fv~ 222 (531)
+|+++.+. .|+.+.
T Consensus 225 ~v~~~d~~-~~~~~~ 238 (391)
T 1l0q_A 225 TVSMIDTG-TNKITA 238 (391)
T ss_dssp EEEEEETT-TTEEEE
T ss_pred cEEEEECC-CCeEEE
Confidence 88888876 365543
No 14
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=88.45 E-value=3.4 Score=45.59 Aligned_cols=122 Identities=11% Similarity=0.079 Sum_probs=68.0
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCC---CeeeeeeEEEEec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASC---NELICKDFFLSME 128 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~---~e~L~refsLft~ 128 (531)
=-|||||++|.+=+.|.+ |.||...+-. .. +.. |-...++..... +... ..-|.+
T Consensus 135 vafSPDG~~LAsgs~DGt-VkIWd~~~~~--l~------------~~~----~i~l~ti~~~~~gh~~~V~---sVawSP 192 (588)
T 2j04_A 135 FEWNPIESSIVVGNEDGE-LQFFSIRKNS--EN------------TPE----FYFESSIRLSDAGSKDWVT---HIVWYE 192 (588)
T ss_dssp EEECSSSSCEEEEETTSE-EEEEECCCCT--TT------------CCC----CEEEEEEECSCTTCCCCEE---EEEEET
T ss_pred EEEcCCCCEEEEEcCCCE-EEEEECCCCc--cc------------ccc----ceeeeeeecccccccccEE---EEEEcC
Confidence 468999999988877764 8999987311 00 000 111222221121 1222 223447
Q ss_pred CceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEe---eee-eeccceEEeeecceeeeecceeeeeee
Q 009589 129 GNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVL---DEK-VFHNDFINLAHNMGVFLYDDLLAIVSL 204 (531)
Q Consensus 129 dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~---D~~-~f~~D~I~LsHN~Gv~L~~dlLaILS~ 204 (531)
|| +++++. |-+++++|+.++.+. .+. ..+.+.| .+|...|..||+.+
T Consensus 193 dg---Laass~--------------------D~tVrlWd~~~~~~~~~~~tL~~~h~~~V-----~svaFsg~~LASa~- 243 (588)
T 2j04_A 193 DV---LVAALS--------------------NNSVFSMTVSASSHQPVSRMIQNASRRKI-----TDLKIVDYKVVLTC- 243 (588)
T ss_dssp TE---EEEEET--------------------TCCEEEECCCSSSSCCCEEEEECCCSSCC-----CCEEEETTEEEEEC-
T ss_pred Cc---EEEEeC--------------------CCeEEEEECCCCccccceeeecccccCcE-----EEEEEECCEEEEEe-
Confidence 88 443332 346899999888732 111 1222222 23333478999888
Q ss_pred cccEEEEEEEccCCeEEEeeeeC
Q 009589 205 RYQTIHILQVRDLGNLVDVRTIG 227 (531)
Q Consensus 205 q~QtIhi~qI~~~G~fv~vrtIG 227 (531)
.++|+++.+.. |+...... |
T Consensus 244 -~~tIkLWd~~~-~~~~~~~~-g 263 (588)
T 2j04_A 244 -PGYVHKIDLKN-YSISSLKT-G 263 (588)
T ss_dssp -SSEEEEEETTT-TEEEEEEC-S
T ss_pred -CCeEEEEECCC-CeEEEEEc-C
Confidence 58999999884 67644443 6
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=86.64 E-value=14 Score=34.46 Aligned_cols=117 Identities=19% Similarity=0.314 Sum_probs=64.3
Q ss_pred CCceeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEE
Q 009589 47 PDHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLS 126 (531)
Q Consensus 47 P~~~lRKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLf 126 (531)
++...-.|+|||++|++-+.|. .|.||.... +.+ . +.|. .+.++..+-.....
T Consensus 193 ~~~~~~~~~~~~~~l~~~~~d~-~i~iwd~~~-------~~~------~--~~~~-----------~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 193 PPVSFVKFSPNGKYILAATLDN-TLKLWDYSK-------GKC------L--KTYT-----------GHKNEKYCIFANFS 245 (312)
T ss_dssp CCEEEEEECTTSSEEEEEETTT-EEEEEETTT-------TEE------E--EEEC-----------SSCCSSSCCCEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCC-eEEEEECCC-------CcE------E--EEEE-----------ecCCceEEEEEEEE
Confidence 4455568999999999988775 788988761 100 0 0000 01111112223344
Q ss_pred ecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeee-c
Q 009589 127 MEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSL-R 205 (531)
Q Consensus 127 t~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~-q 205 (531)
..+|++++.|+. +=++.++|+++|.+..+..-+.|.|.-- -.+--+.+||.-|. .
T Consensus 246 ~~~~~~l~sg~~---------------------dg~i~vwd~~~~~~~~~~~~h~~~v~~~---~~~p~~~~l~s~~~~~ 301 (312)
T 4ery_A 246 VTGGKWIVSGSE---------------------DNLVYIWNLQTKEIVQKLQGHTDVVIST---ACHPTENIIASAALEN 301 (312)
T ss_dssp CSSSCEEEECCT---------------------TSCEEEEETTTCCEEEEECCCSSCEEEE---EECSSSSEEEEEECTT
T ss_pred eCCCcEEEEECC---------------------CCEEEEEECCCchhhhhhhccCCcEEEE---eecCcCCceEEEEccC
Confidence 467777665432 2248899999998876655444443211 01113456666555 3
Q ss_pred ccEEEEEEE
Q 009589 206 YQTIHILQV 214 (531)
Q Consensus 206 ~QtIhi~qI 214 (531)
-.+|.|++.
T Consensus 302 d~~i~~W~~ 310 (312)
T 4ery_A 302 DKTIKLWKS 310 (312)
T ss_dssp TCCEEEEEC
T ss_pred CccEEEecC
Confidence 567777664
No 16
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=86.59 E-value=10 Score=36.91 Aligned_cols=138 Identities=7% Similarity=-0.019 Sum_probs=71.3
Q ss_pred CceeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEe
Q 009589 48 DHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSM 127 (531)
Q Consensus 48 ~~~lRKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft 127 (531)
+.++ -|+|||++|++-+.+ .+.+|+... + +.. ........++. .+ ...+.
T Consensus 42 ~~~~-a~spdg~~l~~~~~~--~v~~~~~~~-----~-g~~------------------~~~~~~~~~g~-~~--~~~~s 91 (365)
T 1jof_A 42 ISWM-TFDHERKNIYGAAMK--KWSSFAVKS-----P-TEI------------------VHEASHPIGGH-PR--ANDAD 91 (365)
T ss_dssp CSEE-EECTTSSEEEEEEBT--EEEEEEEEE-----T-TEE------------------EEEEEEECCSS-GG--GGCTT
T ss_pred CcEE-EECCCCCEEEEEccc--eEEEEEECC-----C-CCE------------------EEeeEeecCCC-Cc--cEEEC
Confidence 4444 599999999988887 788887630 0 100 00001111121 11 24567
Q ss_pred cCceEEEEEeecccCCCCCCCCCCCCC--CCCc-ceEEEEEEEcc-CCeEeeeeee-ccceEEeeecceeeee--cceee
Q 009589 128 EGNQFGLFATSTAQIHDAPTTGRAIQG--VPFI-EKITFHLLRLE-DGVVLDEKVF-HNDFINLAHNMGVFLY--DDLLA 200 (531)
Q Consensus 128 ~dgryvivas~~~~~~~~~~~n~av~~--~p~l-e~ytfhlVdL~-~G~v~D~~~f-~~D~I~LsHN~Gv~L~--~dlLa 200 (531)
.||++++++++. . + .... ++.+ .+=++.++++. +|.+...... ..+ .-.|-+|+.+- +..|+
T Consensus 92 pdg~~l~~~~~~-~-~-------~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 92 TNTRAIFLLAAK-Q-P-------PYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQ--ENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp SCCEEEEEEECS-S-T-------TCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECC--TTCCEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEec-C-C-------cceeccceeecCCceEEEEccCCCCcCcceEeeEEeC--CCCcceEEEECCCCCEEE
Confidence 889976554332 0 0 0000 0000 22356788886 6876543221 000 01223344444 34666
Q ss_pred eeeecccEEEEEEEccCCeEEEeeee
Q 009589 201 IVSLRYQTIHILQVRDLGNLVDVRTI 226 (531)
Q Consensus 201 ILS~q~QtIhi~qI~~~G~fv~vrtI 226 (531)
+-+....+|++|.+.++|++..+.++
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~ 186 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSV 186 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEE
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeE
Confidence 66666689999999745888666544
No 17
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=86.56 E-value=6.4 Score=41.73 Aligned_cols=81 Identities=11% Similarity=0.096 Sum_probs=51.6
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEec-
Q 009589 50 SFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSME- 128 (531)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~- 128 (531)
..=.|||||++|.+-|.| ..|.+|+.. ... .+...++. .+... + ..-|..
T Consensus 182 ~~v~~spdg~~l~v~~~d-~~V~v~D~~--------~~t---------------~~~~~~i~--~g~~p--~-~va~sp~ 232 (543)
T 1nir_A 182 HISRMSASGRYLLVIGRD-ARIDMIDLW--------AKE---------------PTKVAEIK--IGIEA--R-SVESSKF 232 (543)
T ss_dssp EEEEECTTSCEEEEEETT-SEEEEEETT--------SSS---------------CEEEEEEE--CCSEE--E-EEEECCS
T ss_pred ceEEECCCCCEEEEECCC-CeEEEEECc--------CCC---------------CcEEEEEe--cCCCc--c-eEEeCCC
Confidence 445799999999999999 888888772 000 01122233 23221 2 234677
Q ss_pred ---CceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeee
Q 009589 129 ---GNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVF 179 (531)
Q Consensus 129 ---dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f 179 (531)
||+++.+++... =++.++|..+|++..+...
T Consensus 233 ~~~dg~~l~v~~~~~--------------------~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 233 KGYEDRYTIAGAYWP--------------------PQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp TTCTTTEEEEEEEES--------------------SEEEEEETTTCCEEEEEEC
T ss_pred cCCCCCEEEEEEccC--------------------CeEEEEeccccccceeecc
Confidence 999999875431 1367889999988776554
No 18
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=86.39 E-value=7.6 Score=41.05 Aligned_cols=26 Identities=15% Similarity=0.138 Sum_probs=20.9
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-.|||||++|+.-+.|...+.+|...
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELP 203 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEC
T ss_pred EEECCCCCEEEEEEECCCccceEEee
Confidence 45999999999888887777777764
No 19
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=86.05 E-value=22 Score=33.47 Aligned_cols=50 Identities=18% Similarity=0.043 Sum_probs=25.0
Q ss_pred EEEecCceEEEEEeecccCCCCCCCCCCCC------CCCCcceEEEEEEEccCCeE
Q 009589 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQ------GVPFIEKITFHLLRLEDGVV 173 (531)
Q Consensus 124 sLft~dgryvivas~~~~~~~~~~~n~av~------~~p~le~ytfhlVdL~~G~v 173 (531)
.-+..||+++++++......+.+..-+.++ +...-....++++|+.+|..
T Consensus 109 ~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 109 LEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred eeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 346789999998764310000000000000 00112357899999999986
No 20
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=85.76 E-value=13 Score=37.35 Aligned_cols=76 Identities=16% Similarity=0.068 Sum_probs=44.7
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCce
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgr 131 (531)
-.|||||++|+.-|.+.....||.+.--+ +. .+ .+...+... . ..-|..||+
T Consensus 272 ~~~spdg~~l~~~s~~~g~~~i~~~d~~~-----~~-------~~--------------~l~~~~~~~-~-~~~~spdG~ 323 (415)
T 2hqs_A 272 PTWFPDSQNLAFTSDQAGRPQVYKVNING-----GA-------PQ--------------RITWEGSQN-Q-DADVSSDGK 323 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTS-----SC-------CE--------------ECCCSSSEE-E-EEEECTTSS
T ss_pred eEECCCCCEEEEEECCCCCcEEEEEECCC-----CC-------EE--------------EEecCCCcc-c-CeEECCCCC
Confidence 37999999988877655545566553100 10 00 001111111 1 245778999
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeE
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVV 173 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v 173 (531)
++++++... .+.+++++|+++|.+
T Consensus 324 ~l~~~~~~~------------------g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 324 FMVMVSSNG------------------GQQHIAKQDLATGGV 347 (415)
T ss_dssp EEEEEEECS------------------SCEEEEEEETTTCCE
T ss_pred EEEEEECcC------------------CceEEEEEECCCCCE
Confidence 988865430 157899999999976
No 21
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=84.51 E-value=10 Score=35.90 Aligned_cols=27 Identities=4% Similarity=0.156 Sum_probs=21.8
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecC
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMW 78 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g 78 (531)
=.|+|||+++++.+.....|.+|..+.
T Consensus 192 ~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 192 VSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred EEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 369999999777777777899999873
No 22
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=84.34 E-value=26 Score=32.58 Aligned_cols=125 Identities=5% Similarity=-0.072 Sum_probs=72.9
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCC-----eeeeeeEEEEe
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCN-----ELICKDFFLSM 127 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~-----e~L~refsLft 127 (531)
.|+|||++|++-+.+...|.+|.-.... ....+.+..+. ...+-....+.
T Consensus 95 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~s 149 (353)
T 3vgz_A 95 TINNTTQTLWFGNTVNSAVTAIDAKTGE-------------------------VKGRLVLDDRKRTEEVRPLQPRELVAD 149 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCC-------------------------EEEEEESCCCCCCSSCCCCEEEEEEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEeCCCCe-------------------------eEEEEecCCCccccccCCCCCceEEEC
Confidence 5889999888777777777777654111 11112221110 11222345678
Q ss_pred cCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeeeeeec
Q 009589 128 EGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLR 205 (531)
Q Consensus 128 ~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q 205 (531)
.||+++.+++... +-+++++|+++|.+......... +-.|+.+. +..|++.+-
T Consensus 150 ~dg~~l~~~~~~~-------------------~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~- 204 (353)
T 3vgz_A 150 DATNTVYISGIGK-------------------ESVIWVVDGGNIKLKTAIQNTGK-----MSTGLALDSEGKRLYTTNA- 204 (353)
T ss_dssp TTTTEEEEEEESS-------------------SCEEEEEETTTTEEEEEECCCCT-----TCCCCEEETTTTEEEEECT-
T ss_pred CCCCEEEEEecCC-------------------CceEEEEcCCCCceEEEecCCCC-----ccceEEECCCCCEEEEEcC-
Confidence 8999988865331 23588999999998765542221 11244443 345555554
Q ss_pred ccEEEEEEEccCCeEEEeeeeCC
Q 009589 206 YQTIHILQVRDLGNLVDVRTIGS 228 (531)
Q Consensus 206 ~QtIhi~qI~~~G~fv~vrtIG~ 228 (531)
...|+++.+. +|+.+..-.+|.
T Consensus 205 ~~~i~~~d~~-~~~~~~~~~~~~ 226 (353)
T 3vgz_A 205 DGELITIDTA-DNKILSRKKLLD 226 (353)
T ss_dssp TSEEEEEETT-TTEEEEEEECCC
T ss_pred CCeEEEEECC-CCeEEEEEEcCC
Confidence 5678888766 588777666643
No 23
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=84.18 E-value=9.8 Score=40.42 Aligned_cols=74 Identities=11% Similarity=0.026 Sum_probs=42.5
Q ss_pred eeEEEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccc-------eEEeeecceee
Q 009589 121 KDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHND-------FINLAHNMGVF 193 (531)
Q Consensus 121 refsLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D-------~I~LsHN~Gv~ 193 (531)
..++. .||+++++++... .-.+.+++++|+.+|...-...-..+ .+.++.+
T Consensus 290 ~~~~~--pDg~~l~~~~~~~----------------~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd---- 347 (741)
T 2ecf_A 290 ARVNW--RDPQHLSFQRQSR----------------DQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD---- 347 (741)
T ss_dssp EEEEE--EETTEEEEEEEET----------------TSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT----
T ss_pred EEEEe--CCCCEEEEEEecc----------------cCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC----
Confidence 44444 8999999876531 12468899999999975433222211 2222222
Q ss_pred eecceeeeeeecccEEEEEEEccCCe
Q 009589 194 LYDDLLAIVSLRYQTIHILQVRDLGN 219 (531)
Q Consensus 194 L~~dlLaILS~q~QtIhi~qI~~~G~ 219 (531)
+. +.+.+-...+++|+.+..+|+
T Consensus 348 --g~-~~~~~~~~g~~~l~~~~~~~~ 370 (741)
T 2ecf_A 348 --GS-ILWSSERTGFQHLYRIDSKGK 370 (741)
T ss_dssp --SC-EEEEECTTSSCEEEEECSSSC
T ss_pred --Ce-EEEEecCCCccEEEEEcCCCC
Confidence 22 334444556678887764565
No 24
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=82.25 E-value=25 Score=31.27 Aligned_cols=70 Identities=11% Similarity=-0.012 Sum_probs=39.6
Q ss_pred EEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccc--eEEeeecceeeeecceeeee
Q 009589 125 LSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHND--FINLAHNMGVFLYDDLLAIV 202 (531)
Q Consensus 125 Lft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D--~I~LsHN~Gv~L~~dlLaIL 202 (531)
-+..||+++++++... ..+.++.+|+.+|.+..-...... .+.++. -+..|++.
T Consensus 135 ~~spdg~~l~~~~~~~------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~------dg~~l~~~ 190 (297)
T 2ojh_A 135 GWSPDGKSFTYCGIRD------------------QVFDIYSMDIDSGVETRLTHGEGRNDGPDYSP------DGRWIYFN 190 (297)
T ss_dssp EECTTSSEEEEEEEET------------------TEEEEEEEETTTCCEEECCCSSSCEEEEEECT------TSSEEEEE
T ss_pred EECCCCCEEEEEECCC------------------CceEEEEEECCCCcceEcccCCCccccceECC------CCCEEEEE
Confidence 4678999988754331 135788888888875322111111 122222 24456666
Q ss_pred eecccEEEEEEEccCC
Q 009589 203 SLRYQTIHILQVRDLG 218 (531)
Q Consensus 203 S~q~QtIhi~qI~~~G 218 (531)
+-....+.|+.+..+|
T Consensus 191 ~~~~~~~~i~~~~~~~ 206 (297)
T 2ojh_A 191 SSRTGQMQIWRVRVDG 206 (297)
T ss_dssp ECTTSSCEEEEEETTS
T ss_pred ecCCCCccEEEECCCC
Confidence 6556778888886333
No 25
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=81.83 E-value=41 Score=32.88 Aligned_cols=26 Identities=12% Similarity=0.086 Sum_probs=19.5
Q ss_pred eeeCCCCCeEEEee-CCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFS-RNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS-~dq~~L~vYry~ 77 (531)
-+|||||++|+.-| .+...|.|+...
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~ 165 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPS 165 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETT
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECC
Confidence 37999999996544 455778888765
No 26
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=81.45 E-value=40 Score=32.61 Aligned_cols=121 Identities=9% Similarity=-0.001 Sum_probs=69.2
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCceE
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgry 132 (531)
.|+|||++|++-+.....|.+|.... +. ....+. .++. . ...-|..||++
T Consensus 309 ~~~~~g~~l~~~~~~~~~v~v~d~~~-------~~------------------~~~~~~--~~~~-~--~~~~~s~dg~~ 358 (433)
T 3bws_A 309 VSGNTENKIYVSDMCCSKIEVYDLKE-------KK------------------VQKSIP--VFDK-P--NTIALSPDGKY 358 (433)
T ss_dssp EECSSTTEEEEEETTTTEEEEEETTT-------TE------------------EEEEEE--CSSS-E--EEEEECTTSSE
T ss_pred EECCCCCEEEEEecCCCEEEEEECCC-------Cc------------------EEEEec--CCCC-C--CeEEEcCCCCE
Confidence 68999998888777777888887751 10 011111 1111 1 14567789999
Q ss_pred EEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeeeeeecccEEE
Q 009589 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTIH 210 (531)
Q Consensus 133 vivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q~QtIh 210 (531)
+.+++.... .. ....+ +-.-++=+++++|+.+|.+.....-... + .++.+- +..|++-+-...+|+
T Consensus 359 l~~~~~~~~---~~-~~~~~--~~g~~dg~v~~~d~~~~~~~~~~~~~~~-~-----~~~~~s~dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 359 LYVSCRGPN---HP-TEGYL--KKGLVLGKVYVIDTTTDTVKEFWEAGNQ-P-----TGLDVSPDNRYLVISDFLDHQIR 426 (433)
T ss_dssp EEEEECCCC---CT-TTCTT--SCCSSCCEEEEEETTTTEEEEEEECSSS-E-----EEEEECTTSCEEEEEETTTTEEE
T ss_pred EEEEecCCC---cc-ccccc--cccccceEEEEEECCCCcEEEEecCCCC-C-----ceEEEcCCCCEEEEEECCCCeEE
Confidence 988765411 11 00110 0012455799999999988765443221 1 123332 345666665578888
Q ss_pred EEEEc
Q 009589 211 ILQVR 215 (531)
Q Consensus 211 i~qI~ 215 (531)
||.+.
T Consensus 427 v~~~~ 431 (433)
T 3bws_A 427 VYRRD 431 (433)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 88875
No 27
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=81.34 E-value=28 Score=36.68 Aligned_cols=32 Identities=9% Similarity=0.003 Sum_probs=23.4
Q ss_pred EEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCC
Q 009589 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDG 171 (531)
Q Consensus 124 sLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G 171 (531)
.-|..||+++++++... .-...+++++|+.+|
T Consensus 263 ~~~spdg~~l~~~~~~~----------------~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNR----------------AQNECKVNAYDAETG 294 (706)
T ss_dssp EEECTTSSEEEEEEECT----------------TSCEEEEEEEETTTC
T ss_pred EEEECCCCEEEEEEeCC----------------CCCeeEEEEEECCCC
Confidence 45778999988865431 113578999999999
No 28
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=80.99 E-value=10 Score=33.78 Aligned_cols=84 Identities=13% Similarity=0.153 Sum_probs=48.4
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCce
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgr 131 (531)
-.|+|||++|+.-+.....+.||.+.-.+ + .. ..+......+ ...-|..||+
T Consensus 178 ~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-----~-------~~--------------~~~~~~~~~~--~~~~~s~dg~ 229 (297)
T 2ojh_A 178 PDYSPDGRWIYFNSSRTGQMQIWRVRVDG-----S-------SV--------------ERITDSAYGD--WFPHPSPSGD 229 (297)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTS-----S-------CE--------------EECCCCSEEE--EEEEECTTSS
T ss_pred ceECCCCCEEEEEecCCCCccEEEECCCC-----C-------Cc--------------EEEecCCccc--CCeEECCCCC
Confidence 36899999888777555677788775100 0 00 0011111111 1245678999
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeE
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVV 173 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v 173 (531)
++++++...... ..+.-.+.+++++|+.+|.+
T Consensus 230 ~l~~~~~~~~~~----------~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 230 KVVFVSYDADVF----------DHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEEEETTCC----------SCCSSEEEEEEEEETTSCSC
T ss_pred EEEEEEcCCCCC----------cccccCceEEEEEecCCCCc
Confidence 999876652110 12223457899999999864
No 29
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=80.81 E-value=27 Score=34.18 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=26.8
Q ss_pred eeecCCCceeeeeCCCCCeEEEeeCCCc------eEEEEeecCC
Q 009589 42 YDIECPDHSFRKFTDDGQYLISFSRNHQ------DLIVYRPMWL 79 (531)
Q Consensus 42 ~~Ve~P~~~lRKFTpDG~yLIaFS~dq~------~L~vYry~g~ 79 (531)
++|.-| .|=-.|+|||+.|++=+-|.. .|.||+....
T Consensus 11 ~~~g~P-V~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~ 53 (365)
T 4h5i_A 11 YNVGYP-AYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPT 53 (365)
T ss_dssp EECSSC-EEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTT
T ss_pred cCCCCC-EEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCC
Confidence 455555 454579999999999876654 5899987643
No 30
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=80.28 E-value=33 Score=33.31 Aligned_cols=121 Identities=11% Similarity=0.075 Sum_probs=68.0
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCc
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGN 130 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dg 130 (531)
-=.|+|||++|++-+.| ..|.||.... +. ...++...+.+..+ -...|..||
T Consensus 181 ~~~~~~~~~~l~~~~~d-~~i~iwd~~~-------~~------------------~~~~~~~~~~~~~~--~~~~~~~~~ 232 (402)
T 2aq5_A 181 SVDWSRDGALICTSCRD-KRVRVIEPRK-------GT------------------VVAEKDRPHEGTRP--VHAVFVSEG 232 (402)
T ss_dssp EEEECTTSSCEEEEETT-SEEEEEETTT-------TE------------------EEEEEECSSCSSSC--CEEEECSTT
T ss_pred EEEECCCCCEEEEEecC-CcEEEEeCCC-------Cc------------------eeeeeccCCCCCcc--eEEEEcCCC
Confidence 34689999999888877 4688887751 00 01111111111111 135577889
Q ss_pred eEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeE-eeeeeeccceEEeeecceee---ee--cceeeeeee
Q 009589 131 QFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVV-LDEKVFHNDFINLAHNMGVF---LY--DDLLAIVSL 204 (531)
Q Consensus 131 ryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v-~D~~~f~~D~I~LsHN~Gv~---L~--~dlLaILS~ 204 (531)
+++++|... -.+-++.++|+.+|.. .-... +.|..++. .. +..|++.+-
T Consensus 233 ~~l~~g~~~------------------~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~l~~~g~ 287 (402)
T 2aq5_A 233 KILTTGFSR------------------MSERQVALWDTKHLEEPLSLQE-------LDTSSGVLLPFFDPDTNIVYLCGK 287 (402)
T ss_dssp EEEEEEECT------------------TCCEEEEEEETTBCSSCSEEEE-------CCCCSSCEEEEEETTTTEEEEEET
T ss_pred cEEEEeccC------------------CCCceEEEEcCccccCCceEEe-------ccCCCceeEEEEcCCCCEEEEEEc
Confidence 987775321 1245788999988753 22222 22333332 22 456776666
Q ss_pred cccEEEEEEEccCCe--EEEeee
Q 009589 205 RYQTIHILQVRDLGN--LVDVRT 225 (531)
Q Consensus 205 q~QtIhi~qI~~~G~--fv~vrt 225 (531)
.-.+|+||.+.. |+ +..+..
T Consensus 288 ~dg~i~i~d~~~-~~~~~~~l~~ 309 (402)
T 2aq5_A 288 GDSSIRYFEITS-EAPFLHYLSM 309 (402)
T ss_dssp TCSCEEEEEECS-STTCEEEEEE
T ss_pred CCCeEEEEEecC-CCcceEeecc
Confidence 678999999985 44 444443
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=79.92 E-value=37 Score=32.59 Aligned_cols=29 Identities=14% Similarity=0.236 Sum_probs=23.2
Q ss_pred CceeeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 48 DHSFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 48 ~~~lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.+..-.|+|||++|++-|.|. .+.||...
T Consensus 18 ~v~~l~~sp~g~~las~~~D~-~i~iw~~~ 46 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDR-RIRIWGTE 46 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTS-CEEEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCC-eEEEEEcC
Confidence 355668999999998888774 68899876
No 32
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=79.08 E-value=27 Score=33.86 Aligned_cols=47 Identities=9% Similarity=0.147 Sum_probs=34.1
Q ss_pred EEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeeecccEEEEEEEcc
Q 009589 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRD 216 (531)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~QtIhi~qI~~ 216 (531)
++.|+|+.+|...-+..+..... +|.+..+.+++.+ -.+|+||.+..
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~~v~------~v~~~~~~~~~~~--~~~i~i~d~~~ 128 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKVDAPVK------DLFLSREFIVVSY--GDVISVFKFGN 128 (355)
T ss_dssp EEEEEETTTTEEEEEEECSSCEE------EEEECSSEEEEEE--TTEEEEEESST
T ss_pred EEEEEECCCCcEEEEEECCCceE------EEEEcCCEEEEEE--cCEEEEEECCC
Confidence 89999999999888777665433 3445566666543 57899999875
No 33
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=78.08 E-value=45 Score=31.21 Aligned_cols=108 Identities=7% Similarity=0.082 Sum_probs=63.5
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCce
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgr 131 (531)
=.|+|||++|++=|.| ..+.||.... +.+ ...+... . ..+ -+.-|..||+
T Consensus 19 ~~fsp~~~~l~s~~~d-g~v~lWd~~~-------~~~------------------~~~~~~~-~-~~v--~~~~~~~~~~ 68 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYS-GRVELWNYET-------QVE------------------VRSIQVT-E-TPV--RAGKFIARKN 68 (304)
T ss_dssp EEECSSSSEEEEEETT-SEEEEEETTT-------TEE------------------EEEEECC-S-SCE--EEEEEEGGGT
T ss_pred EEECCCCCEEEEEcCC-CcEEEEECCC-------Cce------------------eEEeecc-C-CcE--EEEEEeCCCC
Confidence 3699999999998877 4688888751 100 0111111 1 111 1345778899
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeeeeeecccEE
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTI 209 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q~QtI 209 (531)
+++.|+.- -++.++|+++|...-...-+.+.|. .|.+. +.+||.-| .-.+|
T Consensus 69 ~l~s~s~d---------------------~~i~vwd~~~~~~~~~~~~h~~~v~-----~~~~~~~~~~l~sgs-~D~~v 121 (304)
T 2ynn_A 69 WIIVGSDD---------------------FRIRVFNYNTGEKVVDFEAHPDYIR-----SIAVHPTKPYVLSGS-DDLTV 121 (304)
T ss_dssp EEEEEETT---------------------SEEEEEETTTCCEEEEEECCSSCEE-----EEEECSSSSEEEEEE-TTSCE
T ss_pred EEEEECCC---------------------CEEEEEECCCCcEEEEEeCCCCcEE-----EEEEcCCCCEEEEEC-CCCeE
Confidence 88765432 3688999999987655544444332 11122 33444333 45788
Q ss_pred EEEEEcc
Q 009589 210 HILQVRD 216 (531)
Q Consensus 210 hi~qI~~ 216 (531)
.|+.+..
T Consensus 122 ~lWd~~~ 128 (304)
T 2ynn_A 122 KLWNWEN 128 (304)
T ss_dssp EEEEGGG
T ss_pred EEEECCC
Confidence 8888764
No 34
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=77.93 E-value=44 Score=30.91 Aligned_cols=51 Identities=6% Similarity=-0.014 Sum_probs=34.8
Q ss_pred eEEEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeeecccEEEEEEEccC
Q 009589 160 KITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDL 217 (531)
Q Consensus 160 ~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~QtIhi~qI~~~ 217 (531)
+=++.++|+.+|........+...+.+... .+.+ +++-...+|++|.+...
T Consensus 150 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~i~~~~~~~~ 200 (368)
T 3mmy_A 150 DKTLKFWDTRSSNPMMVLQLPERCYCADVI------YPMA-VVATAERGLIVYQLENQ 200 (368)
T ss_dssp TSEEEEECSSCSSCSEEEECSSCEEEEEEE------TTEE-EEEEGGGCEEEEECSSS
T ss_pred CCcEEEEECCCCcEEEEEecCCCceEEEec------CCee-EEEeCCCcEEEEEeccc
Confidence 446899999999887777776655554433 3333 44556678999998753
No 35
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=77.93 E-value=32 Score=31.52 Aligned_cols=116 Identities=14% Similarity=0.043 Sum_probs=64.4
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCce
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgr 131 (531)
-.|+|||++|++-+.|. .|.+|....... .....+......+ -+.-|..+|+
T Consensus 103 ~~~~~~~~~l~~~~~d~-~i~~~d~~~~~~-------------------------~~~~~~~~~~~~i--~~~~~~~~~~ 154 (337)
T 1gxr_A 103 CKLLPDGCTLIVGGEAS-TLSIWDLAAPTP-------------------------RIKAELTSSAPAC--YALAISPDSK 154 (337)
T ss_dssp EEECTTSSEEEEEESSS-EEEEEECCCC---------------------------EEEEEEECSSSCE--EEEEECTTSS
T ss_pred EEEcCCCCEEEEEcCCC-cEEEEECCCCCc-------------------------ceeeecccCCCce--EEEEECCCCC
Confidence 47999999988877664 688887752110 0000111111111 1234567888
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeee--ecceeeeeeecccEE
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFL--YDDLLAIVSLRYQTI 209 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L--~~dlLaILS~q~QtI 209 (531)
++++++.. =+++++|+.+|...-...-+.+.|. ++.+ -++.|++-+ ...+|
T Consensus 155 ~l~~~~~d---------------------g~v~~~d~~~~~~~~~~~~~~~~i~-----~~~~~~~~~~l~~~~-~dg~i 207 (337)
T 1gxr_A 155 VCFSCCSD---------------------GNIAVWDLHNQTLVRQFQGHTDGAS-----CIDISNDGTKLWTGG-LDNTV 207 (337)
T ss_dssp EEEEEETT---------------------SCEEEEETTTTEEEEEECCCSSCEE-----EEEECTTSSEEEEEE-TTSEE
T ss_pred EEEEEeCC---------------------CcEEEEeCCCCceeeeeecccCceE-----EEEECCCCCEEEEEe-cCCcE
Confidence 88876543 1378899999987655433333221 1222 234566555 45789
Q ss_pred EEEEEccCCeEEEe
Q 009589 210 HILQVRDLGNLVDV 223 (531)
Q Consensus 210 hi~qI~~~G~fv~v 223 (531)
+++.+.. |+.+..
T Consensus 208 ~~~d~~~-~~~~~~ 220 (337)
T 1gxr_A 208 RSWDLRE-GRQLQQ 220 (337)
T ss_dssp EEEETTT-TEEEEE
T ss_pred EEEECCC-CceEee
Confidence 9998874 665443
No 36
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=77.65 E-value=16 Score=38.32 Aligned_cols=35 Identities=11% Similarity=0.011 Sum_probs=24.3
Q ss_pred EEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEcc-CCe
Q 009589 125 LSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLE-DGV 172 (531)
Q Consensus 125 Lft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~-~G~ 172 (531)
-|..||+++.+++... + .-+....+++++|+. +|.
T Consensus 194 ~~SpDG~~la~~~~~~--~-----------~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 194 RLSPDGRQAVWLAWDH--P-----------RMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp EECTTSSEEEEEEECT--T-----------CCTTTCEEEEEEEECTTSC
T ss_pred eECCCCCEEEEEECCC--C-----------CCCCCCcEEEEEEECCCCc
Confidence 4779999998876441 1 112346789999999 683
No 37
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=77.51 E-value=26 Score=36.67 Aligned_cols=81 Identities=9% Similarity=-0.039 Sum_probs=45.1
Q ss_pred EEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccC------CeEeeeee-eccceEEeeecceeeeec
Q 009589 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLED------GVVLDEKV-FHNDFINLAHNMGVFLYD 196 (531)
Q Consensus 124 sLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~------G~v~D~~~-f~~D~I~LsHN~Gv~L~~ 196 (531)
.-|..||+++++++... .. ..+.-...+++++|+.+ |.+. ..+ -..+.+ ..-.++=-+
T Consensus 135 ~~~spDg~~l~~~~~~~-~~----------~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~---~~~~~SpDG 199 (662)
T 3azo_A 135 PVLLPERGEVWCMAEEF-TG----------EGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFV---TGPRLSPDG 199 (662)
T ss_dssp EEEETTTTEEEEEEEEE-CS----------SSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEE---CCCEECTTS
T ss_pred cEECCCCCEEEEEEecc-cC----------CCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcc---cCceECCCC
Confidence 45778999998866431 11 01123457899999998 6531 111 111111 000111225
Q ss_pred ceeeeeeecc-------cEEEEEEEccCCe
Q 009589 197 DLLAIVSLRY-------QTIHILQVRDLGN 219 (531)
Q Consensus 197 dlLaILS~q~-------QtIhi~qI~~~G~ 219 (531)
..||..|-.+ .+|+++.+..+|+
T Consensus 200 ~~la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 200 RQAVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp SEEEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred CEEEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 5677777654 5899999874573
No 38
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=77.45 E-value=49 Score=31.27 Aligned_cols=24 Identities=17% Similarity=0.372 Sum_probs=19.1
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEe
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYR 75 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYr 75 (531)
--.|+|||++|++-+.|. .|.||.
T Consensus 113 ~~~~s~~~~~l~~~~~dg-~i~i~~ 136 (425)
T 1r5m_A 113 CLAWSHDGNSIVTGVENG-ELRLWN 136 (425)
T ss_dssp EEEECTTSSEEEEEETTS-CEEEEE
T ss_pred EEEEcCCCCEEEEEeCCC-eEEEEe
Confidence 346999999998887774 688887
No 39
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=77.19 E-value=16 Score=35.56 Aligned_cols=28 Identities=21% Similarity=0.312 Sum_probs=23.0
Q ss_pred CceeeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 48 DHSFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 48 ~~~lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
+..-=.|+|||++|++-+. ..|.||...
T Consensus 287 ~v~~~~~s~~g~~l~~~~~--~~v~iwd~~ 314 (447)
T 3dw8_B 287 SISDVKFSHSGRYMMTRDY--LSVKVWDLN 314 (447)
T ss_dssp CEEEEEECTTSSEEEEEES--SEEEEEETT
T ss_pred eEEEEEECCCCCEEEEeeC--CeEEEEeCC
Confidence 3444589999999998776 899999987
No 40
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=76.81 E-value=27 Score=33.54 Aligned_cols=25 Identities=20% Similarity=0.296 Sum_probs=19.8
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
=.|+|||++|++-|.|. .+.||...
T Consensus 67 ~~~sp~g~~l~s~s~D~-~v~iw~~~ 91 (345)
T 3fm0_A 67 VAWSPCGNYLASASFDA-TTCIWKKN 91 (345)
T ss_dssp EEECTTSSEEEEEETTS-CEEEEEEC
T ss_pred EEECCCCCEEEEEECCC-cEEEEEcc
Confidence 46999999999888875 46777765
No 41
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=76.76 E-value=45 Score=30.52 Aligned_cols=128 Identities=11% Similarity=-0.013 Sum_probs=68.8
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCe-eeeeeEEEEecCce
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNE-LICKDFFLSMEGNQ 131 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e-~L~refsLft~dgr 131 (531)
.|+|||++|++-+.+...|.+|...... ....+.+...++ .-.=...-+..||+
T Consensus 40 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~s~dg~ 94 (337)
T 1pby_B 40 MVAPGGRIAYATVNKSESLVKIDLVTGE-------------------------TLGRIDLSTPEERVKSLFGAALSPDGK 94 (337)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTCC-------------------------EEEEEECCBTTEEEECTTCEEECTTSS
T ss_pred EEcCCCCEEEEEeCCCCeEEEEECCCCC-------------------------eEeeEEcCCcccccccccceEECCCCC
Confidence 4999999987777777788887654110 011111111000 00001345678999
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCC-c--ceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeeeeeecc
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPF-I--EKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRY 206 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~-l--e~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q~ 206 (531)
++.+++..... .+. . .+-+++++|+++|.+......... -.++.+- +..|++. .
T Consensus 95 ~l~~~~~~~~~------------~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~---~ 153 (337)
T 1pby_B 95 TLAIYESPVRL------------ELTHFEVQPTRVALYDAETLSRRKAFEAPRQ------ITMLAWARDGSKLYGL---G 153 (337)
T ss_dssp EEEEEEEEEEE------------CSSCEEECCCEEEEEETTTTEEEEEEECCSS------CCCEEECTTSSCEEEE---S
T ss_pred EEEEEeccccc------------ccccccccCceEEEEECCCCcEEEEEeCCCC------cceeEECCCCCEEEEe---C
Confidence 98887533110 011 1 245789999999987755433211 1123332 3344444 3
Q ss_pred cEEEEEEEccCCeEEEeeeeC
Q 009589 207 QTIHILQVRDLGNLVDVRTIG 227 (531)
Q Consensus 207 QtIhi~qI~~~G~fv~vrtIG 227 (531)
..|+++.+. +|+.+..-..|
T Consensus 154 ~~i~~~d~~-~~~~~~~~~~~ 173 (337)
T 1pby_B 154 RDLHVMDPE-AGTLVEDKPIQ 173 (337)
T ss_dssp SSEEEEETT-TTEEEEEECST
T ss_pred CeEEEEECC-CCcEeeeeecc
Confidence 678888876 47766544434
No 42
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=76.60 E-value=48 Score=30.66 Aligned_cols=111 Identities=10% Similarity=0.117 Sum_probs=62.6
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCc
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGN 130 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dg 130 (531)
-=+|+|||++|++-+.|. .|.||.... +.. ..++. .+.+... +.-|..||
T Consensus 37 ~~~~s~~~~~l~~~~~dg-~i~vwd~~~-------~~~------------------~~~~~-~h~~~v~---~~~~~~~~ 86 (369)
T 3zwl_B 37 QVKYNKEGDLLFSCSKDS-SASVWYSLN-------GER------------------LGTLD-GHTGTIW---SIDVDCFT 86 (369)
T ss_dssp EEEECTTSCEEEEEESSS-CEEEEETTT-------CCE------------------EEEEC-CCSSCEE---EEEECTTS
T ss_pred EEEEcCCCCEEEEEeCCC-EEEEEeCCC-------chh------------------hhhhh-hcCCcEE---EEEEcCCC
Confidence 346999999999888765 678887641 100 00000 1112211 23456788
Q ss_pred eEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeeec----c
Q 009589 131 QFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLR----Y 206 (531)
Q Consensus 131 ryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q----~ 206 (531)
++++.++.. =++.++|+.+|...-..........++-+. -+..|++.+-. .
T Consensus 87 ~~l~s~~~d---------------------g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~~~~~~~ 141 (369)
T 3zwl_B 87 KYCVTGSAD---------------------YSIKLWDVSNGQCVATWKSPVPVKRVEFSP----CGNYFLAILDNVMKNP 141 (369)
T ss_dssp SEEEEEETT---------------------TEEEEEETTTCCEEEEEECSSCEEEEEECT----TSSEEEEEECCBTTBC
T ss_pred CEEEEEeCC---------------------CeEEEEECCCCcEEEEeecCCCeEEEEEcc----CCCEEEEecCCccCCC
Confidence 888765432 268999999998877766444433332111 13334433322 2
Q ss_pred cEEEEEEEcc
Q 009589 207 QTIHILQVRD 216 (531)
Q Consensus 207 QtIhi~qI~~ 216 (531)
-+|+++.+..
T Consensus 142 g~i~~~d~~~ 151 (369)
T 3zwl_B 142 GSINIYEIER 151 (369)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEecC
Confidence 6888888864
No 43
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=76.25 E-value=37 Score=35.87 Aligned_cols=25 Identities=8% Similarity=0.090 Sum_probs=19.9
Q ss_pred eeCC----CCCeEEEeeCCCceEEEEeec
Q 009589 53 KFTD----DGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 53 KFTp----DG~yLIaFS~dq~~L~vYry~ 77 (531)
-||| ||++|.+-+..-..+.|+...
T Consensus 228 a~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp EECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred EeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 3899 999998888766778888643
No 44
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=75.79 E-value=20 Score=38.20 Aligned_cols=50 Identities=12% Similarity=0.105 Sum_probs=34.7
Q ss_pred ceEEEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeee----cccEEEEEEE
Q 009589 159 EKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSL----RYQTIHILQV 214 (531)
Q Consensus 159 e~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~----q~QtIhi~qI 214 (531)
.+=++.++|+++|.+..+...+...+.++.+ +..||+.|. -...+++++.
T Consensus 449 ~d~~v~~~d~~~~~~~~~~~~~~~~v~~s~d------g~~la~~~~~~~~~~~~~~~~~~ 502 (814)
T 3mkq_A 449 SDGFVYFFDWDNGTLVRRIDVNAKDVIWSDN------GELVMIVNTNSNGDEASGYTLLF 502 (814)
T ss_dssp ETTEEEEECTTTCCEEEEESSCEEEEEECTT------SSEEEEEECCCSSCSCSEEEEEE
T ss_pred cCCEEEEEECCcCcEEEEEecCCCEEEEcCC------CCEEEEEEcCcccCCceEEEEEe
Confidence 3458999999999988777766666666654 477888743 2345666654
No 45
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=75.33 E-value=35 Score=32.46 Aligned_cols=37 Identities=3% Similarity=-0.131 Sum_probs=26.0
Q ss_pred EEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccc
Q 009589 125 LSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHND 182 (531)
Q Consensus 125 Lft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D 182 (531)
.|..||+++++++.. -+++++|+++|....-..++..
T Consensus 87 ~~spdg~~l~~~~~~---------------------~~l~~~d~~~g~~~~~~~~~~~ 123 (388)
T 3pe7_A 87 FLSPDDDALFYVKDG---------------------RNLMRVDLATLEENVVYQVPAE 123 (388)
T ss_dssp EECTTSSEEEEEETT---------------------TEEEEEETTTCCEEEEEECCTT
T ss_pred EEcCCCCEEEEEeCC---------------------CeEEEEECCCCcceeeeechhh
Confidence 478999998886521 2689999999976554444444
No 46
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=75.33 E-value=27 Score=39.47 Aligned_cols=18 Identities=17% Similarity=0.174 Sum_probs=13.3
Q ss_pred eeeeeCCCCCeEEEeeCC
Q 009589 50 SFRKFTDDGQYLISFSRN 67 (531)
Q Consensus 50 ~lRKFTpDG~yLIaFS~d 67 (531)
.--.|||||++|+.-|.+
T Consensus 56 ~~~~~SPDG~~la~~s~~ 73 (1045)
T 1k32_A 56 NNARFFPDGRKIAIRVMR 73 (1045)
T ss_dssp EEEEECTTSSEEEEEEEE
T ss_pred cCeEECCCCCEEEEEEee
Confidence 345799999988766654
No 47
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=74.73 E-value=63 Score=31.20 Aligned_cols=121 Identities=6% Similarity=-0.031 Sum_probs=70.9
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCceE
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgry 132 (531)
.|+|||++|++-+.....|.+|.... +.. ... +..++. =...-+..||++
T Consensus 218 ~~~~~~~~l~~~~~~~~~i~~~d~~~-------~~~------------------~~~--~~~~~~---~~~~~~~~~g~~ 267 (433)
T 3bws_A 218 LYDPIRDLVYCSNWISEDISVIDRKT-------KLE------------------IRK--TDKIGL---PRGLLLSKDGKE 267 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTT-------TEE------------------EEE--CCCCSE---EEEEEECTTSSE
T ss_pred EEcCCCCEEEEEecCCCcEEEEECCC-------CcE------------------EEE--ecCCCC---ceEEEEcCCCCE
Confidence 67888888876665556777776541 100 000 111111 134566789999
Q ss_pred EEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeeeeeecccEEE
Q 009589 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTIH 210 (531)
Q Consensus 133 vivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q~QtIh 210 (531)
+++++.... .+ .-++-+++++|+.+|.+......... -.++.+. ++.|.+.+-..-+|+
T Consensus 268 l~~~~~~~~---------~~----~~~dg~i~~~d~~~~~~~~~~~~~~~------~~~~~~~~~g~~l~~~~~~~~~v~ 328 (433)
T 3bws_A 268 LYIAQFSAS---------NQ----ESGGGRLGIYSMDKEKLIDTIGPPGN------KRHIVSGNTENKIYVSDMCCSKIE 328 (433)
T ss_dssp EEEEEEESC---------TT----CSCCEEEEEEETTTTEEEEEEEEEEC------EEEEEECSSTTEEEEEETTTTEEE
T ss_pred EEEEECCCC---------cc----ccCCCeEEEEECCCCcEEeeccCCCC------cceEEECCCCCEEEEEecCCCEEE
Confidence 988765411 00 02467899999999987665432221 1133333 335666666778899
Q ss_pred EEEEccCCeEEEe
Q 009589 211 ILQVRDLGNLVDV 223 (531)
Q Consensus 211 i~qI~~~G~fv~v 223 (531)
++.+. +|+.+..
T Consensus 329 v~d~~-~~~~~~~ 340 (433)
T 3bws_A 329 VYDLK-EKKVQKS 340 (433)
T ss_dssp EEETT-TTEEEEE
T ss_pred EEECC-CCcEEEE
Confidence 99987 4776543
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=73.99 E-value=45 Score=31.67 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=21.3
Q ss_pred eeeeCCCCCeEEEeeCCC--ceEEEEeec
Q 009589 51 FRKFTDDGQYLISFSRNH--QDLIVYRPM 77 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq--~~L~vYry~ 77 (531)
--.|+|||++|++-+.|. ..|.||...
T Consensus 238 ~i~~~~~~~~l~~~~~d~~~g~i~i~d~~ 266 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNSFGCITLYETE 266 (397)
T ss_dssp EEEECSSTTEEEEEEEETTEEEEEEEETT
T ss_pred eEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 347899999999888773 678888876
No 49
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=73.97 E-value=13 Score=40.39 Aligned_cols=25 Identities=12% Similarity=0.187 Sum_probs=21.2
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.|||||++|+..+.|...+.+|.+.
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~ 201 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYS 201 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEE
T ss_pred EECCCCCEEEEEEEcccCCceEEEE
Confidence 5999999999888888877777765
No 50
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=73.90 E-value=34 Score=36.76 Aligned_cols=23 Identities=9% Similarity=0.105 Sum_probs=20.1
Q ss_pred eeC----CCCCeEEEeeCCCceEEEEe
Q 009589 53 KFT----DDGQYLISFSRNHQDLIVYR 75 (531)
Q Consensus 53 KFT----pDG~yLIaFS~dq~~L~vYr 75 (531)
-|| |||++|+..+-....+.|+.
T Consensus 246 a~s~~~~pDGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 246 ETSKMEGWEDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp EECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred EEccccCCCCCEEEEEEccCCeEEEEE
Confidence 488 79999999998888888887
No 51
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=73.83 E-value=26 Score=34.93 Aligned_cols=27 Identities=22% Similarity=0.338 Sum_probs=22.6
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
--.|+|||++|++-+.....+.||...
T Consensus 107 ~~~~s~d~~~l~~~~~~dg~v~iwd~~ 133 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSDKSLLVFDVD 133 (450)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEECc
Confidence 347999999998777777889999986
No 52
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=73.22 E-value=46 Score=32.16 Aligned_cols=27 Identities=7% Similarity=0.226 Sum_probs=23.3
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-=.|+|||++|++=|.|.+-+.||...
T Consensus 200 ~~~~s~~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 200 MVRLNRKSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp EEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 347999999999999998778999876
No 53
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=72.80 E-value=33 Score=32.03 Aligned_cols=24 Identities=8% Similarity=0.191 Sum_probs=20.5
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.|+|||++|++-|.|. .+.||...
T Consensus 16 ~~s~~g~~las~s~D~-~v~iw~~~ 39 (297)
T 2pm7_B 16 VMDYYGKRMATCSSDK-TIKIFEVE 39 (297)
T ss_dssp EECTTSSEEEEEETTS-CEEEEEBC
T ss_pred EECCCCCEEEEEeCCC-EEEEEecC
Confidence 5999999999988875 58899876
No 54
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=72.63 E-value=8.5 Score=39.92 Aligned_cols=33 Identities=12% Similarity=-0.013 Sum_probs=22.4
Q ss_pred EEEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEe
Q 009589 123 FFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVL 174 (531)
Q Consensus 123 fsLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~ 174 (531)
..-|..||+++. ++. .. ...+++++|+++|...
T Consensus 199 ~~~~SpDG~~l~--~~~-~~----------------~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 199 SASISPGMKVTA--GLE-TA----------------REARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEECTTSCEEE--EEE-CS----------------SCEEEEEECTTTCCEE
T ss_pred cceECCCCCEEE--Ecc-CC----------------CeeEEEEEcCCCCcEE
Confidence 345778999876 222 10 1267999999999876
No 55
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=72.42 E-value=48 Score=31.65 Aligned_cols=112 Identities=13% Similarity=0.130 Sum_probs=62.2
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCce
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgr 131 (531)
-.|+|||++|++-+.|. .|.||.... +.. ..++. .+.+. + -+.-|..||+
T Consensus 170 ~~~spdg~~lasg~~dg-~i~iwd~~~-------~~~------------------~~~~~-~h~~~-v--~~l~~spd~~ 219 (321)
T 3ow8_A 170 IAYSPDGKYLASGAIDG-IINIFDIAT-------GKL------------------LHTLE-GHAMP-I--RSLTFSPDSQ 219 (321)
T ss_dssp EEECTTSSEEEEEETTS-CEEEEETTT-------TEE------------------EEEEC-CCSSC-C--CEEEECTTSC
T ss_pred EEECCCCCEEEEEcCCC-eEEEEECCC-------CcE------------------EEEEc-ccCCc-e--eEEEEcCCCC
Confidence 37999999999888775 578887651 100 00000 00111 0 1344678898
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeeeeeecccEE
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTI 209 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q~QtI 209 (531)
+++.|+.- -++.|+|+.+|....+..-+.+.|. .|... +..|+.-| .-.+|
T Consensus 220 ~l~s~s~d---------------------g~i~iwd~~~~~~~~~~~~h~~~v~-----~~~~sp~~~~l~s~s-~D~~v 272 (321)
T 3ow8_A 220 LLVTASDD---------------------GYIKIYDVQHANLAGTLSGHASWVL-----NVAFCPDDTHFVSSS-SDKSV 272 (321)
T ss_dssp EEEEECTT---------------------SCEEEEETTTCCEEEEECCCSSCEE-----EEEECTTSSEEEEEE-TTSCE
T ss_pred EEEEEcCC---------------------CeEEEEECCCcceeEEEcCCCCceE-----EEEECCCCCEEEEEe-CCCcE
Confidence 87665332 2478899999887654433333221 11121 34555444 34689
Q ss_pred EEEEEccCCeEE
Q 009589 210 HILQVRDLGNLV 221 (531)
Q Consensus 210 hi~qI~~~G~fv 221 (531)
.|+.+. .|+.+
T Consensus 273 ~iwd~~-~~~~~ 283 (321)
T 3ow8_A 273 KVWDVG-TRTCV 283 (321)
T ss_dssp EEEETT-TTEEE
T ss_pred EEEeCC-CCEEE
Confidence 999886 36544
No 56
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=72.35 E-value=47 Score=31.57 Aligned_cols=34 Identities=3% Similarity=-0.225 Sum_probs=24.1
Q ss_pred EEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEe
Q 009589 125 LSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVL 174 (531)
Q Consensus 125 Lft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~ 174 (531)
.|..||+.+++++... . -.+.+++++|+++|...
T Consensus 244 ~~spdg~~l~~~~~~~--~--------------~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 244 FWVPDGSALVYVSYLK--G--------------SPDRFIYSADPETLENR 277 (388)
T ss_dssp EECTTSSCEEEEEEET--T--------------CCCEEEEEECTTTCCEE
T ss_pred eECCCCCEEEEEecCC--C--------------CCcceEEEEecCCCceE
Confidence 4889999988765431 0 12357999999999753
No 57
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=72.09 E-value=62 Score=34.79 Aligned_cols=33 Identities=12% Similarity=0.275 Sum_probs=22.2
Q ss_pred ecceeeeeeecccEEEEEEEccCCeEEEeeee-CC
Q 009589 195 YDDLLAIVSLRYQTIHILQVRDLGNLVDVRTI-GS 228 (531)
Q Consensus 195 ~~dlLaILS~q~QtIhi~qI~~~G~fv~vrtI-G~ 228 (531)
-+..|.|-+...-+|.++... +|+++..-.+ |.
T Consensus 352 dgr~~~va~~~sn~V~ViD~~-t~kl~~~i~vgg~ 385 (567)
T 1qks_A 352 SHRYFITAANARNKLVVIDTK-EGKLVAIEDTGGQ 385 (567)
T ss_dssp TSCEEEEEEGGGTEEEEEETT-TTEEEEEEECSSS
T ss_pred CCCEEEEEeCCCCeEEEEECC-CCcEEEEEeccCc
Confidence 345566666677788887765 5888776666 44
No 58
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=71.25 E-value=44 Score=31.91 Aligned_cols=25 Identities=24% Similarity=0.377 Sum_probs=20.0
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
=.|+|||++|++-|.|. .|.||...
T Consensus 212 l~~spd~~~l~s~s~dg-~i~iwd~~ 236 (321)
T 3ow8_A 212 LTFSPDSQLLVTASDDG-YIKIYDVQ 236 (321)
T ss_dssp EEECTTSCEEEEECTTS-CEEEEETT
T ss_pred EEEcCCCCEEEEEcCCC-eEEEEECC
Confidence 36999999988877765 58888876
No 59
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=71.23 E-value=36 Score=31.73 Aligned_cols=24 Identities=13% Similarity=0.225 Sum_probs=20.0
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.|+|||++|++-+.| ..|.||...
T Consensus 18 ~~s~~~~~l~~~~~d-g~i~iw~~~ 41 (379)
T 3jrp_A 18 VLDYYGKRLATCSSD-KTIKIFEVE 41 (379)
T ss_dssp EECSSSSEEEEEETT-SCEEEEEEE
T ss_pred EEcCCCCEEEEEECC-CcEEEEecC
Confidence 699999999887776 468899886
No 60
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=71.19 E-value=58 Score=29.91 Aligned_cols=24 Identities=13% Similarity=0.202 Sum_probs=19.1
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.|+|||++|++=|.|. .+.||...
T Consensus 222 ~~s~~~~~l~s~s~Dg-~i~iwd~~ 245 (340)
T 4aow_A 222 TVSPDGSLCASGGKDG-QAMLWDLN 245 (340)
T ss_dssp EECTTSSEEEEEETTC-EEEEEETT
T ss_pred EECCCCCEEEEEeCCC-eEEEEEec
Confidence 5899999999888775 57777765
No 61
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=69.32 E-value=13 Score=35.45 Aligned_cols=14 Identities=7% Similarity=-0.016 Sum_probs=11.6
Q ss_pred eEEEEEEEccCCeE
Q 009589 160 KITFHLLRLEDGVV 173 (531)
Q Consensus 160 ~ytfhlVdL~~G~v 173 (531)
+..++++|+++|.+
T Consensus 319 ~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 319 DPFLYVLNTKAKSA 332 (396)
T ss_dssp CCEEEEEETTTTBC
T ss_pred CCcEEEEecccCce
Confidence 46799999999974
No 62
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=67.93 E-value=87 Score=30.51 Aligned_cols=25 Identities=28% Similarity=0.340 Sum_probs=19.8
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
=.|+|||++|++=|.|. .|.||...
T Consensus 262 v~~~~~g~~l~s~s~d~-~v~~wd~~ 286 (393)
T 1erj_A 262 VVFTRDGQSVVSGSLDR-SVKLWNLQ 286 (393)
T ss_dssp EEECTTSSEEEEEETTS-EEEEEEC-
T ss_pred EEECCCCCEEEEEeCCC-EEEEEECC
Confidence 36999999998877775 68899876
No 63
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=67.84 E-value=71 Score=29.47 Aligned_cols=133 Identities=11% Similarity=0.051 Sum_probs=0.0
Q ss_pred eCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCccc-----------------chhhhhhheeeEEEccCCC
Q 009589 54 FTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKA-----------------KRFESFFTQLYSVTLASCN 116 (531)
Q Consensus 54 FTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~-----------------~~F~~fF~~~~~~~l~~~~ 116 (531)
|+|||+ |++.+.+ |.++.-. ........+... ..-...|...+.+.+..++
T Consensus 155 ~s~dg~-l~~~~~~---i~~~d~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 222 (349)
T 1jmx_B 155 AADDGS-LYVAGPD---IYKMDVK--------TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDD 222 (349)
T ss_dssp ECTTSC-EEEESSS---EEEECTT--------TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC---
T ss_pred ECCCCc-EEEccCc---EEEEeCC--------CCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCC
Q ss_pred eee------------------------------eeeEEEEec-CceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEE
Q 009589 117 ELI------------------------------CKDFFLSME-GNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHL 165 (531)
Q Consensus 117 e~L------------------------------~refsLft~-dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhl 165 (531)
... .-....+.. ||+++.++ +-++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----------------------~~~v~~ 279 (349)
T 1jmx_B 223 KQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----------------------LNRLAK 279 (349)
T ss_dssp ----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----------------------ESEEEE
T ss_pred cCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-----------------------cCeEEE
Q ss_pred EEccCCeEeeeeeeccceEEeeecceeeeecceeeeeeecccEEEEEEEccCCeEEEeeeeC
Q 009589 166 LRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIG 227 (531)
Q Consensus 166 VdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~QtIhi~qI~~~G~fv~vrtIG 227 (531)
+|+++|.+............++-+.. ++.|++ +-...+|.++.+. +|+.+..-.+|
T Consensus 280 ~d~~~~~~~~~~~~~~~~~~~~~s~d----g~~l~~-~~~~~~v~v~d~~-~~~~~~~~~~~ 335 (349)
T 1jmx_B 280 YDLKQRKLIKAANLDHTYYCVAFDKK----GDKLYL-GGTFNDLAVFNPD-TLEKVKNIKLP 335 (349)
T ss_dssp EETTTTEEEEEEECSSCCCEEEECSS----SSCEEE-ESBSSEEEEEETT-TTEEEEEEECS
T ss_pred EECccCeEEEEEcCCCCccceEECCC----CCEEEE-ecCCCeEEEEecc-ccceeeeeecC
No 64
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=67.46 E-value=21 Score=34.81 Aligned_cols=17 Identities=24% Similarity=0.452 Sum_probs=15.1
Q ss_pred eeCCCCCeEEEeeCCCc
Q 009589 53 KFTDDGQYLISFSRNHQ 69 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~ 69 (531)
+|||||++|++=|.|..
T Consensus 49 ~fSpDG~~las~s~d~~ 65 (357)
T 4g56_B 49 RYRRDGALLLAASSLSS 65 (357)
T ss_dssp EECSSSCEEEEEECSSS
T ss_pred EECCCCCEEEEEcCCCC
Confidence 79999999999998754
No 65
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=66.44 E-value=98 Score=30.03 Aligned_cols=129 Identities=12% Similarity=0.059 Sum_probs=70.5
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccC--CCeeeeeeEEEEecC
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLAS--CNELICKDFFLSMEG 129 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~--~~e~L~refsLft~d 129 (531)
=.|+|||++|++-|.|. .|.||+..... . +.+ .+ .+. ......+.+.+ .++.+..=..++.+|
T Consensus 117 ~~~~~~~~~l~s~s~dg-~i~vwd~~~~~---~-~~~------~~--~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 181 (437)
T 3gre_A 117 ITMIPNFDAFAVSSKDG-QIIVLKVNHYQ---Q-ESE------VK--FLN--CECIRKINLKNFGKNEYAVRMRAFVNEE 181 (437)
T ss_dssp EEECTTSSEEEEEETTS-EEEEEEEEEEE---E-TTE------EE--EEE--EEEEEEEEGGGGSSCCCEEEEEEEECSS
T ss_pred EEEeCCCCEEEEEeCCC-EEEEEEecccc---C-Cce------ee--ccc--cceeEEEEccCcccccCceEEEEEEcCC
Confidence 46999999999988874 68888773100 0 100 00 000 00223344433 333333333446678
Q ss_pred ceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeee--ccceEEeeecceeee--ecceeeeeeec
Q 009589 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVF--HNDFINLAHNMGVFL--YDDLLAIVSLR 205 (531)
Q Consensus 130 gryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f--~~D~I~LsHN~Gv~L--~~dlLaILS~q 205 (531)
|.+++.|+.. =++.++|+.+|...-+..- +.+.|. .+.+ -+++||.-|-
T Consensus 182 ~~~l~~~~~d---------------------~~i~iwd~~~~~~~~~~~~~~h~~~v~-----~~~~s~~~~~l~s~~~- 234 (437)
T 3gre_A 182 KSLLVALTNL---------------------SRVIIFDIRTLERLQIIENSPRHGAVS-----SICIDEECCVLILGTT- 234 (437)
T ss_dssp CEEEEEEETT---------------------SEEEEEETTTCCEEEEEECCGGGCCEE-----EEEECTTSCEEEEEET-
T ss_pred CCEEEEEeCC---------------------CeEEEEeCCCCeeeEEEccCCCCCceE-----EEEECCCCCEEEEEcC-
Confidence 8888776443 2588999999987665543 222221 1111 1445555444
Q ss_pred ccEEEEEEEccCCeEEEe
Q 009589 206 YQTIHILQVRDLGNLVDV 223 (531)
Q Consensus 206 ~QtIhi~qI~~~G~fv~v 223 (531)
--+|.|+.+.. |+.+..
T Consensus 235 dg~i~iwd~~~-~~~~~~ 251 (437)
T 3gre_A 235 RGIIDIWDIRF-NVLIRS 251 (437)
T ss_dssp TSCEEEEETTT-TEEEEE
T ss_pred CCeEEEEEcCC-ccEEEE
Confidence 46788888774 665543
No 66
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=65.95 E-value=1e+02 Score=30.03 Aligned_cols=113 Identities=12% Similarity=0.110 Sum_probs=61.4
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEcc-CCCeeeeeeEEEEecCc
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLA-SCNELICKDFFLSMEGN 130 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~-~~~e~L~refsLft~dg 130 (531)
-.|+|||++|++=|.| ..|.||.... +.. . ..+. +.+... +.-|..||
T Consensus 129 v~~s~dg~~l~s~~~d-~~i~iwd~~~-------~~~------------------~--~~~~~h~~~v~---~~~~~p~~ 177 (393)
T 1erj_A 129 VCFSPDGKFLATGAED-RLIRIWDIEN-------RKI------------------V--MILQGHEQDIY---SLDYFPSG 177 (393)
T ss_dssp EEECTTSSEEEEEETT-SCEEEEETTT-------TEE------------------E--EEECCCSSCEE---EEEECTTS
T ss_pred EEECCCCCEEEEEcCC-CeEEEEECCC-------CcE------------------E--EEEccCCCCEE---EEEEcCCC
Confidence 3699999998887766 4688887651 000 0 0011 111111 33456788
Q ss_pred eEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeeecccEEE
Q 009589 131 QFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIH 210 (531)
Q Consensus 131 ryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~QtIh 210 (531)
++++.|+. |-++.++|+.+|...-..........++-+. --+.+||.-| .-.+|.
T Consensus 178 ~~l~s~s~---------------------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~s-~d~~v~ 232 (393)
T 1erj_A 178 DKLVSGSG---------------------DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSP---GDGKYIAAGS-LDRAVR 232 (393)
T ss_dssp SEEEEEET---------------------TSEEEEEETTTTEEEEEEECSSCEEEEEECS---TTCCEEEEEE-TTSCEE
T ss_pred CEEEEecC---------------------CCcEEEEECCCCeeEEEEEcCCCcEEEEEEC---CCCCEEEEEc-CCCcEE
Confidence 88765432 2368899999998654443333222221100 0134555544 346788
Q ss_pred EEEEccCCeEE
Q 009589 211 ILQVRDLGNLV 221 (531)
Q Consensus 211 i~qI~~~G~fv 221 (531)
|+.+. .|+.+
T Consensus 233 iwd~~-~~~~~ 242 (393)
T 1erj_A 233 VWDSE-TGFLV 242 (393)
T ss_dssp EEETT-TCCEE
T ss_pred EEECC-CCcEE
Confidence 88876 36554
No 67
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=65.66 E-value=1.1e+02 Score=30.44 Aligned_cols=61 Identities=15% Similarity=0.073 Sum_probs=43.3
Q ss_pred EEEEEEccCCeEeeeeeeccceEEeeecceeeeecc---eeeeeeecccEEEEEEEccCCeEEEe-eeeCCc
Q 009589 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDD---LLAIVSLRYQTIHILQVRDLGNLVDV-RTIGSF 229 (531)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~d---lLaILS~q~QtIhi~qI~~~G~fv~v-rtIG~f 229 (531)
++.+||++++++..+..... .-.|+.+-.| +|.+..-..-+|.|+... +|+.+.. -.+|+.
T Consensus 299 ~V~VID~~t~~vv~~i~~g~------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~-t~~vv~~i~~vG~~ 363 (373)
T 2mad_H 299 EVTSVTGLVGQTSSQISLGH------DVDAISVAQDGGPDLYALSAGTEVLHIYDAG-AGDQDQSTVELGSG 363 (373)
T ss_pred eEEEEECCCCEEEEEEECCC------CcCeEEECCCCCeEEEEEcCCCCeEEEEECC-CCCEEeeecCCCCC
Confidence 68999999999988775543 2345555544 566655556899999876 5888866 567763
No 68
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=65.41 E-value=57 Score=34.93 Aligned_cols=57 Identities=14% Similarity=0.073 Sum_probs=33.1
Q ss_pred eEEEEEEEccCCeEee--eeeeccceEEeeecceeeeecceeeeeeecccEEEEEEEccCCe
Q 009589 160 KITFHLLRLEDGVVLD--EKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGN 219 (531)
Q Consensus 160 ~ytfhlVdL~~G~v~D--~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~QtIhi~qI~~~G~ 219 (531)
+.+++++|+.+|...+ ..+-..+...| .++.+.++-|.+.....-+..|+.+..+|+
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l---~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~ 352 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPEDSSASL---LSVSIVGGHLSLEYLKDATSEVRVATLKGK 352 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCCSSCEE---EEEEEETTEEEEEEEETTEEEEEEEETTCC
T ss_pred CCEEEEEeCCCCCccCCeEEecCCCCCeE---EEEEEECCEEEEEEEECCEEEEEEEeCCCC
Confidence 5678999998885311 11111111112 256666787777777777777777754465
No 69
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=65.34 E-value=1e+02 Score=29.90 Aligned_cols=52 Identities=19% Similarity=0.164 Sum_probs=27.7
Q ss_pred EEEEEEEccCCeEeeeeeeccceEEeeecceeeee--c-ceeeeeeecccEEEEEEEccCCe
Q 009589 161 ITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--D-DLLAIVSLRYQTIHILQVRDLGN 219 (531)
Q Consensus 161 ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~-dlLaILS~q~QtIhi~qI~~~G~ 219 (531)
=++.|+|+++|...-...=+.+.|. .+... + .+|+--| .-.+|.|+.+.. |+
T Consensus 149 ~~i~iwd~~~~~~~~~~~~h~~~V~-----~~~~~~~~~~~l~s~s-~D~~v~iwd~~~-~~ 203 (344)
T 4gqb_B 149 ICIKVWDLAQQVVLSSYRAHAAQVT-----CVAASPHKDSVFLSCS-EDNRILLWDTRC-PK 203 (344)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEE-----EEEECSSCTTEEEEEE-TTSCEEEEETTS-SS
T ss_pred CeEEEEECCCCcEEEEEcCcCCceE-----EEEecCCCCCceeeec-cccccccccccc-cc
Confidence 3589999999987755433333221 11111 1 2333333 336788887763 44
No 70
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=64.64 E-value=26 Score=35.12 Aligned_cols=33 Identities=6% Similarity=0.040 Sum_probs=23.5
Q ss_pred EEEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeE
Q 009589 123 FFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVV 173 (531)
Q Consensus 123 fsLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v 173 (531)
..-|..||+++++++... ...+++++|+.+|.+
T Consensus 358 ~~~~spdg~~l~~~s~~~------------------~~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 358 TPSLAPNGTMVIYSSSQG------------------MGSVLNLVSTDGRFK 390 (415)
T ss_dssp EEEECTTSSEEEEEEEET------------------TEEEEEEEETTSCCE
T ss_pred CeEEcCCCCEEEEEEcCC------------------CccEEEEEECCCCcE
Confidence 456789999998876441 135799999986643
No 71
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=63.55 E-value=49 Score=35.03 Aligned_cols=28 Identities=21% Similarity=0.148 Sum_probs=21.3
Q ss_pred eeeeCCCCCeEEEeeC-CC----ceEEEEeecC
Q 009589 51 FRKFTDDGQYLISFSR-NH----QDLIVYRPMW 78 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~-dq----~~L~vYry~g 78 (531)
--.|||||++|+.-+. |. ..|.++.-.+
T Consensus 41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~ 73 (741)
T 2ecf_A 41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS 73 (741)
T ss_dssp EEEECTTSSEEEEEECCSSCTTEEEEEEEETTT
T ss_pred CceEecCCCEEEEEeccCCCCcccEEEEEECCC
Confidence 4579999999988887 54 3777777653
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=62.89 E-value=1.2e+02 Score=34.40 Aligned_cols=25 Identities=16% Similarity=0.442 Sum_probs=20.5
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-.|+|||++|++-|.|. .|.||...
T Consensus 663 ~~~s~~~~~l~s~~~d~-~v~vwd~~ 687 (1249)
T 3sfz_A 663 CAFSSDDSYIATCSADK-KVKIWDSA 687 (1249)
T ss_dssp EEECTTSSEEEEEETTS-EEEEEETT
T ss_pred EEEecCCCEEEEEeCCC-eEEEEECC
Confidence 47999999999988775 58888765
No 73
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=62.70 E-value=1.2e+02 Score=29.52 Aligned_cols=122 Identities=10% Similarity=0.034 Sum_probs=67.3
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCce
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgr 131 (531)
=.|+|||++|++-+.|. .|.||...... . .+. +......+ -+.-|..+|.
T Consensus 223 ~~~~~~~~~l~s~~~d~-~v~iwd~~~~~-------~------------------~~~--~~~~~~~v--~~~~~~p~~~ 272 (401)
T 4aez_A 223 LAWRSDGLQLASGGNDN-VVQIWDARSSI-------P------------------KFT--KTNHNAAV--KAVAWCPWQS 272 (401)
T ss_dssp EEECTTSSEEEEEETTS-CEEEEETTCSS-------E------------------EEE--ECCCSSCC--CEEEECTTST
T ss_pred EEEcCCCCEEEEEeCCC-eEEEccCCCCC-------c------------------cEE--ecCCcceE--EEEEECCCCC
Confidence 46899999998888775 67888765100 0 000 00111111 1334556677
Q ss_pred EEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeee-eecccEEE
Q 009589 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIV-SLRYQTIH 210 (531)
Q Consensus 132 yvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaIL-S~q~QtIh 210 (531)
+++++++.. .+=+++++|+.+|...-..........++-+ --+..|++. +-..-+|+
T Consensus 273 ~ll~~~~gs------------------~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~g~~dg~i~ 330 (401)
T 4aez_A 273 NLLATGGGT------------------MDKQIHFWNAATGARVNTVDAGSQVTSLIWS----PHSKEIMSTHGFPDNNLS 330 (401)
T ss_dssp TEEEEECCT------------------TTCEEEEEETTTCCEEEEEECSSCEEEEEEC----SSSSEEEEEECTTTCEEE
T ss_pred CEEEEecCC------------------CCCEEEEEECCCCCEEEEEeCCCcEEEEEEC----CCCCeEEEEeecCCCcEE
Confidence 766643210 2346899999999876655433332222211 123444444 33567899
Q ss_pred EEEEccCCeEEEeeee
Q 009589 211 ILQVRDLGNLVDVRTI 226 (531)
Q Consensus 211 i~qI~~~G~fv~vrtI 226 (531)
||.+.. |+...+..+
T Consensus 331 v~~~~~-~~~~~~~~~ 345 (401)
T 4aez_A 331 IWSYSS-SGLTKQVDI 345 (401)
T ss_dssp EEEEET-TEEEEEEEE
T ss_pred EEecCC-ccceeEEEe
Confidence 999874 677666544
No 74
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=62.51 E-value=1.1e+02 Score=29.46 Aligned_cols=117 Identities=15% Similarity=0.119 Sum_probs=64.5
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecC
Q 009589 50 SFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEG 129 (531)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~d 129 (531)
.--.|+|||++|++-+.|. .+.||...... . +... .....+.. +.+. +. ++-|..+
T Consensus 110 ~~~~~sp~g~~lasg~~d~-~i~v~~~~~~~-----~-----~~~~---------~~~~~~~~-h~~~-v~--~~~~~~~ 165 (354)
T 2pbi_B 110 MACAYAPSGCAIACGGLDN-KCSVYPLTFDK-----N-----ENMA---------AKKKSVAM-HTNY-LS--ACSFTNS 165 (354)
T ss_dssp CEEEECTTSSEEEEESTTS-EEEEEECCCCT-----T-----CCSG---------GGCEEEEE-CSSC-EE--EEEECSS
T ss_pred EEEEECCCCCEEEEeeCCC-CEEEEEEeccc-----c-----cccc---------ccceeeec-cCCc-EE--EEEEeCC
Confidence 3457999999999988875 57788765211 0 0000 00111111 1111 11 4456677
Q ss_pred ceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee-------cceeeee
Q 009589 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY-------DDLLAIV 202 (531)
Q Consensus 130 gryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~-------~dlLaIL 202 (531)
+.+++.||. |=++.|+|+++|...-+.. .|+..|... +++|+.-
T Consensus 166 ~~~l~t~s~---------------------D~~v~lwd~~~~~~~~~~~--------~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 166 DMQILTASG---------------------DGTCALWDVESGQLLQSFH--------GHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp SSEEEEEET---------------------TSEEEEEETTTCCEEEEEE--------CCSSCEEEEEECCCSSCCEEEEE
T ss_pred CCEEEEEeC---------------------CCcEEEEeCCCCeEEEEEc--------CCCCCeEEEEEEeCCCCCEEEEE
Confidence 877665432 2368899999998765433 344433311 2455554
Q ss_pred eecccEEEEEEEccCCeEE
Q 009589 203 SLRYQTIHILQVRDLGNLV 221 (531)
Q Consensus 203 S~q~QtIhi~qI~~~G~fv 221 (531)
|. --+|.++.+.. |+.+
T Consensus 217 s~-Dg~v~~wd~~~-~~~~ 233 (354)
T 2pbi_B 217 GC-DKKAMVWDMRS-GQCV 233 (354)
T ss_dssp ET-TSCEEEEETTT-CCEE
T ss_pred eC-CCeEEEEECCC-CcEE
Confidence 44 36788888763 5543
No 75
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=62.14 E-value=1e+02 Score=32.93 Aligned_cols=76 Identities=13% Similarity=-0.019 Sum_probs=40.4
Q ss_pred EEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEe--eeeeeccceEEeeecceeeee-cceeee
Q 009589 125 LSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVL--DEKVFHNDFINLAHNMGVFLY-DDLLAI 201 (531)
Q Consensus 125 Lft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~--D~~~f~~D~I~LsHN~Gv~L~-~dlLaI 201 (531)
.+..||+.+++.+.. .-.++.++++|+.+|... -..+-..|...+ .++... ++-|.+
T Consensus 292 ~~s~dg~~l~~~s~~-----------------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~lv~ 351 (710)
T 2xdw_A 292 YVTNEGTVFTFKTNR-----------------HSPNYRLINIDFTDPEESKWKVLVPEHEKDVL---EWVACVRSNFLVL 351 (710)
T ss_dssp EEEEETTEEEEEECT-----------------TCTTCEEEEEETTSCCGGGCEEEECCCSSCEE---EEEEEETTTEEEE
T ss_pred EEeccCCEEEEEECC-----------------CCCCCEEEEEeCCCCCcccceeccCCCCCCeE---EEEEEEcCCEEEE
Confidence 467788888876432 012467889999888421 111111121111 145555 666666
Q ss_pred eeecccEEEEEEEcc-CCeE
Q 009589 202 VSLRYQTIHILQVRD-LGNL 220 (531)
Q Consensus 202 LS~q~QtIhi~qI~~-~G~f 220 (531)
.+...-..+|+.+.. +|+.
T Consensus 352 ~~~~~g~~~l~~~~~~~g~~ 371 (710)
T 2xdw_A 352 CYLHDVKNTLQLHDLATGAL 371 (710)
T ss_dssp EEEETTEEEEEEEETTTCCE
T ss_pred EEEECCEEEEEEEECCCCCE
Confidence 666655555555532 4653
No 76
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=60.90 E-value=1.1e+02 Score=29.12 Aligned_cols=25 Identities=32% Similarity=0.405 Sum_probs=19.9
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
=.|+|||++|++-|.|. .|.||...
T Consensus 145 ~~~~~~~~~l~s~s~d~-~i~iwd~~ 169 (420)
T 3vl1_A 145 LKFFPSGEALISSSQDM-QLKIWSVK 169 (420)
T ss_dssp EEECTTSSEEEEEETTS-EEEEEETT
T ss_pred EEECCCCCEEEEEeCCC-eEEEEeCC
Confidence 46999999888877775 68888765
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=60.37 E-value=96 Score=31.26 Aligned_cols=120 Identities=12% Similarity=-0.038 Sum_probs=65.3
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCC-CeeeeeeEEEEecC
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASC-NELICKDFFLSMEG 129 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~-~e~L~refsLft~d 129 (531)
--.|+|||+++++.......+.||.... +.. ..++.-..+ +..+ -+.-|..|
T Consensus 165 ~~~~~~~~~~~l~~~~~d~~v~vwd~~~-------~~~------------------~~~~~~~~~~~~~v--~~~~~~~~ 217 (615)
T 1pgu_A 165 ACHLKQSRPMRSMTVGDDGSVVFYQGPP-------FKF------------------SASDRTHHKQGSFV--RDVEFSPD 217 (615)
T ss_dssp EEEECSSSSCEEEEEETTTEEEEEETTT-------BEE------------------EEEECSSSCTTCCE--EEEEECST
T ss_pred EEEECCCCCcEEEEEeCCCcEEEEeCCC-------cce------------------eeeecccCCCCceE--EEEEECCC
Confidence 3469999997666666667888887541 100 011110000 0011 13456677
Q ss_pred -ceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeee-e---eccceEEeeecceeee-ecceeeeee
Q 009589 130 -NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEK-V---FHNDFINLAHNMGVFL-YDDLLAIVS 203 (531)
Q Consensus 130 -gryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~-~---f~~D~I~LsHN~Gv~L-~~dlLaILS 203 (531)
|++++.++.. =++.++|+.+|...... . -+.+.|. ++.. -++.|+.-+
T Consensus 218 ~~~~l~~~~~d---------------------g~i~vwd~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~l~~~~ 271 (615)
T 1pgu_A 218 SGEFVITVGSD---------------------RKISCFDGKSGEFLKYIEDDQEPVQGGIF-----ALSWLDSQKFATVG 271 (615)
T ss_dssp TCCEEEEEETT---------------------CCEEEEETTTCCEEEECCBTTBCCCSCEE-----EEEESSSSEEEEEE
T ss_pred CCCEEEEEeCC---------------------CeEEEEECCCCCEeEEecccccccCCceE-----EEEEcCCCEEEEEc
Confidence 8988876543 14788999999876554 1 1222211 1112 344555555
Q ss_pred ecccEEEEEEEccCCeEEEeee
Q 009589 204 LRYQTIHILQVRDLGNLVDVRT 225 (531)
Q Consensus 204 ~q~QtIhi~qI~~~G~fv~vrt 225 (531)
- --+|.++.+. .|+.+..-.
T Consensus 272 ~-d~~i~~wd~~-~~~~~~~~~ 291 (615)
T 1pgu_A 272 A-DATIRVWDVT-TSKCVQKWT 291 (615)
T ss_dssp T-TSEEEEEETT-TTEEEEEEE
T ss_pred C-CCcEEEEECC-CCcEEEEEc
Confidence 3 4679999887 466655443
No 78
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=60.07 E-value=49 Score=31.98 Aligned_cols=25 Identities=8% Similarity=0.088 Sum_probs=20.2
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-=.|+|||++|++ + +...|.||...
T Consensus 182 ~~~~~~~~~~l~s-~-~d~~i~iwd~~ 206 (447)
T 3dw8_B 182 SISINSDYETYLS-A-DDLRINLWHLE 206 (447)
T ss_dssp EEEECTTSSEEEE-E-CSSEEEEEETT
T ss_pred EEEEcCCCCEEEE-e-CCCeEEEEECC
Confidence 3469999999887 5 67789999876
No 79
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=59.06 E-value=1.5e+02 Score=30.37 Aligned_cols=31 Identities=13% Similarity=-0.015 Sum_probs=22.4
Q ss_pred CceeeeeCCCCCeEEEeeCCCceEEEEeecC
Q 009589 48 DHSFRKFTDDGQYLISFSRNHQDLIVYRPMW 78 (531)
Q Consensus 48 ~~~lRKFTpDG~yLIaFS~dq~~L~vYry~g 78 (531)
+++-=.|||||++|+.-|.....+.||...|
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~ 53 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDG 53 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcC
Confidence 3555569999998866565356788998654
No 80
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=58.75 E-value=1.1e+02 Score=34.62 Aligned_cols=57 Identities=23% Similarity=0.201 Sum_probs=35.1
Q ss_pred ceEEEEEEEccCCeEeeeeeeccceEEeeecceee---e--ecceeeeeeecccEEEEEEEccCCeEEEeee
Q 009589 159 EKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVF---L--YDDLLAIVSLRYQTIHILQVRDLGNLVDVRT 225 (531)
Q Consensus 159 e~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~---L--~~dlLaILS~q~QtIhi~qI~~~G~fv~vrt 225 (531)
.+-++.++|+.+|.......- |..+|. . -++.|+.-|- -.+|.++.+.. |+.+..-.
T Consensus 721 ~d~~v~vwd~~~~~~~~~~~~--------h~~~v~~~~~sp~~~~l~s~s~-dg~v~vwd~~~-~~~~~~~~ 782 (1249)
T 3sfz_A 721 NDFFLKLWDLNQKECRNTMFG--------HTNSVNHCRFSPDDELLASCSA-DGTLRLWDVRS-ANERKSIN 782 (1249)
T ss_dssp TTSCEEEEETTSSSEEEEECC--------CSSCEEEEEECSSTTEEEEEES-SSEEEEEEGGG-TEEEEEEE
T ss_pred CCCeEEEEECCCcchhheecC--------CCCCEEEEEEecCCCEEEEEEC-CCeEEEEeCCC-Ccccceec
Confidence 455789999999986655433 333332 1 2446666554 36899999874 55544433
No 81
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=58.33 E-value=10 Score=37.41 Aligned_cols=73 Identities=15% Similarity=0.099 Sum_probs=53.4
Q ss_pred EEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeeecccEEEEEEEccCCeEEEeeeeC-C----ccCcchHH
Q 009589 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIG-S----FCREDDEL 236 (531)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~QtIhi~qI~~~G~fv~vrtIG-~----fc~eDD~l 236 (531)
+++.||+++|++..+..+... .+-.|+.+.++.|-++.-+..+|.++... +++.+..=..| + .|+++..+
T Consensus 45 ~v~~iD~~tg~v~~~i~l~~~----~fgeGi~~~g~~lyv~t~~~~~v~viD~~-t~~v~~~i~~g~~~g~glt~Dg~~l 119 (266)
T 2iwa_A 45 SVRQVALQTGKVENIHKMDDS----YFGEGLTLLNEKLYQVVWLKNIGFIYDRR-TLSNIKNFTHQMKDGWGLATDGKIL 119 (266)
T ss_dssp EEEEEETTTCCEEEEEECCTT----CCEEEEEEETTEEEEEETTCSEEEEEETT-TTEEEEEEECCSSSCCEEEECSSSE
T ss_pred EEEEEECCCCCEEEEEecCCC----cceEEEEEeCCEEEEEEecCCEEEEEECC-CCcEEEEEECCCCCeEEEEECCCEE
Confidence 599999999999988776432 23358999999999999999999998865 57766544456 2 34444444
Q ss_pred HHh
Q 009589 237 FLI 239 (531)
Q Consensus 237 ~l~ 239 (531)
+++
T Consensus 120 ~vs 122 (266)
T 2iwa_A 120 YGS 122 (266)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 82
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=57.62 E-value=1.2e+02 Score=27.96 Aligned_cols=128 Identities=9% Similarity=0.051 Sum_probs=67.4
Q ss_pred eeeCCCCCeEEEeeCC----CceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEe
Q 009589 52 RKFTDDGQYLISFSRN----HQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSM 127 (531)
Q Consensus 52 RKFTpDG~yLIaFS~d----q~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft 127 (531)
-.|+|||++|++-+.+ ...|.+|.......... -... ... ....+....+... --+.-|.
T Consensus 121 ~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~-~~~~-~~~------------~~~~~~~~~~~~~--~~~~~~~ 184 (369)
T 3zwl_B 121 VEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHE-LTKV-SEE------------PIHKIITHEGLDA--ATVAGWS 184 (369)
T ss_dssp EEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCC-EEEE-CSS------------CSEEEECCTTCCC--EEEEEEC
T ss_pred EEEccCCCEEEEecCCccCCCCEEEEEEecCCcccee-eccc-ccc------------eeeeccCCcCccc--eeEEEEc
Confidence 4699999999998877 36788888873221111 0000 000 0111111111111 1244567
Q ss_pred cCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccC-CeEeeeeeeccceEEeeecceeee--ecceeeeeee
Q 009589 128 EGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLED-GVVLDEKVFHNDFINLAHNMGVFL--YDDLLAIVSL 204 (531)
Q Consensus 128 ~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~-G~v~D~~~f~~D~I~LsHN~Gv~L--~~dlLaILS~ 204 (531)
.+|+++++|+.. =++.++|+.+ +.......-+.+.|. ++.+ -++.|++-+
T Consensus 185 ~~~~~l~~~~~d---------------------g~i~i~d~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~~~- 237 (369)
T 3zwl_B 185 TKGKYIIAGHKD---------------------GKISKYDVSNNYEYVDSIDLHEKSIS-----DMQFSPDLTYFITSS- 237 (369)
T ss_dssp GGGCEEEEEETT---------------------SEEEEEETTTTTEEEEEEECCSSCEE-----EEEECTTSSEEEEEE-
T ss_pred CCCCEEEEEcCC---------------------CEEEEEECCCCcEeEEEEecCCCcee-----EEEECCCCCEEEEec-
Confidence 789988775432 2578889888 666555444333322 1111 134454444
Q ss_pred cccEEEEEEEccCCeEEEe
Q 009589 205 RYQTIHILQVRDLGNLVDV 223 (531)
Q Consensus 205 q~QtIhi~qI~~~G~fv~v 223 (531)
.--+|+|+.+.. |+.+..
T Consensus 238 ~d~~i~v~d~~~-~~~~~~ 255 (369)
T 3zwl_B 238 RDTNSFLVDVST-LQVLKK 255 (369)
T ss_dssp TTSEEEEEETTT-CCEEEE
T ss_pred CCceEEEEECCC-Cceeee
Confidence 446889998874 665544
No 83
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=57.12 E-value=1.5e+02 Score=31.90 Aligned_cols=72 Identities=13% Similarity=-0.043 Sum_probs=41.6
Q ss_pred ecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCe-EeeeeeeccceEEeeecceeeeecceeeeeeec
Q 009589 127 MEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGV-VLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLR 205 (531)
Q Consensus 127 t~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~-v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q 205 (531)
..||+.+++.|.. .-.+..++++|+.+|. -.-..+-..+.+ + .++...++-|.+.+..
T Consensus 324 ~~dg~~l~~~s~~-----------------~~~~~~l~~~d~~~~~~~~~~l~~~~~~~-l---~~~~~~~~~lv~~~~~ 382 (741)
T 1yr2_A 324 DGVGDQLWFVSGD-----------------GAPLKKIVRVDLSGSTPRFDTVVPESKDN-L---ESVGIAGNRLFASYIH 382 (741)
T ss_dssp EEETTEEEEEECT-----------------TCTTCEEEEEECSSSSCEEEEEECCCSSE-E---EEEEEEBTEEEEEEEE
T ss_pred eccCCEEEEEECC-----------------CCCCCEEEEEeCCCCccccEEEecCCCCe-E---EEEEEECCEEEEEEEE
Confidence 4788888775432 1124678899998862 111111112211 2 2566668877777777
Q ss_pred ccEEEEEEEccCCe
Q 009589 206 YQTIHILQVRDLGN 219 (531)
Q Consensus 206 ~QtIhi~qI~~~G~ 219 (531)
.-..+|+.+..+|.
T Consensus 383 dg~~~l~~~~~~g~ 396 (741)
T 1yr2_A 383 DAKSQVLAFDLDGK 396 (741)
T ss_dssp TTEEEEEEEETTSC
T ss_pred CCEEEEEEEeCCCC
Confidence 77777777754455
No 84
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=56.62 E-value=90 Score=33.11 Aligned_cols=112 Identities=7% Similarity=0.055 Sum_probs=64.7
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCceE
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgry 132 (531)
.|+|||++|++-+.| ..|.||.... +.. ..++. .+.+.. -+.-|..||++
T Consensus 20 ~~sp~~~~la~~~~~-g~v~iwd~~~-------~~~------------------~~~~~-~~~~~v---~~~~~s~~~~~ 69 (814)
T 3mkq_A 20 DFHPTEPWVLTTLYS-GRVEIWNYET-------QVE------------------VRSIQ-VTETPV---RAGKFIARKNW 69 (814)
T ss_dssp EECSSSSEEEEEETT-SEEEEEETTT-------TEE------------------EEEEE-CCSSCE---EEEEEEGGGTE
T ss_pred EECCCCCEEEEEeCC-CEEEEEECCC-------Cce------------------EEEEe-cCCCcE---EEEEEeCCCCE
Confidence 699999998887765 5788998751 100 00111 011111 14557789998
Q ss_pred EEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeeeeeecccEEE
Q 009589 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTIH 210 (531)
Q Consensus 133 vivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaILS~q~QtIh 210 (531)
+++|+.. -++.++|+.+|...-+..-+.+.|.- +... +..|++- -.-.+|.
T Consensus 70 l~~~~~d---------------------g~i~vw~~~~~~~~~~~~~~~~~v~~-----~~~s~~~~~l~~~-~~dg~i~ 122 (814)
T 3mkq_A 70 IIVGSDD---------------------FRIRVFNYNTGEKVVDFEAHPDYIRS-----IAVHPTKPYVLSG-SDDLTVK 122 (814)
T ss_dssp EEEEETT---------------------SEEEEEETTTCCEEEEEECCSSCEEE-----EEECSSSSEEEEE-ETTSEEE
T ss_pred EEEEeCC---------------------CeEEEEECCCCcEEEEEecCCCCEEE-----EEEeCCCCEEEEE-cCCCEEE
Confidence 8776432 35889999999876655544443321 1111 2344433 3457888
Q ss_pred EEEEccCCeEE
Q 009589 211 ILQVRDLGNLV 221 (531)
Q Consensus 211 i~qI~~~G~fv 221 (531)
|+.+...+..+
T Consensus 123 vw~~~~~~~~~ 133 (814)
T 3mkq_A 123 LWNWENNWALE 133 (814)
T ss_dssp EEEGGGTSEEE
T ss_pred EEECCCCceEE
Confidence 88886533443
No 85
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=56.53 E-value=1.3e+02 Score=28.18 Aligned_cols=28 Identities=14% Similarity=0.301 Sum_probs=22.4
Q ss_pred ceeeeeCC-CCCeEEEeeCCCceEEEEeec
Q 009589 49 HSFRKFTD-DGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 49 ~~lRKFTp-DG~yLIaFS~dq~~L~vYry~ 77 (531)
..--.|+| ||++|++-+.|. .|.||...
T Consensus 46 v~~~~~s~~~~~~l~~~~~dg-~i~iw~~~ 74 (408)
T 4a11_B 46 INTLDIEPVEGRYMLSGGSDG-VIVLYDLE 74 (408)
T ss_dssp EEEEEECTTTCCEEEEEETTS-CEEEEECC
T ss_pred EEEEEEecCCCCEEEEEcCCC-eEEEEECC
Confidence 33446999 999999988875 58999887
No 86
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=54.74 E-value=37 Score=32.98 Aligned_cols=25 Identities=0% Similarity=0.020 Sum_probs=19.7
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.|+|||..++|.+.....|.||..+
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESS
T ss_pred hhhhcccceEEEeecccceeEEECC
Confidence 5899988777777666778888875
No 87
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=54.62 E-value=1.3e+02 Score=27.40 Aligned_cols=26 Identities=4% Similarity=-0.059 Sum_probs=20.8
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 50 SFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.--.|+|||++|++-+ ...+.||...
T Consensus 55 ~~~~~~~~~~~l~~~~--dg~i~iw~~~ 80 (337)
T 1gxr_A 55 CAVTISNPTRHVYTGG--KGCVKVWDIS 80 (337)
T ss_dssp CEEEECSSSSEEEEEC--BSEEEEEETT
T ss_pred EEEEEecCCcEEEEcC--CCeEEEEECC
Confidence 3446999999988877 4789999886
No 88
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=54.05 E-value=1e+02 Score=32.92 Aligned_cols=31 Identities=6% Similarity=-0.006 Sum_probs=21.1
Q ss_pred EEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccC
Q 009589 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLED 170 (531)
Q Consensus 124 sLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~ 170 (531)
.-++.||+++++++..... .+-.++++|+.+
T Consensus 238 ~~~SpDg~~l~~~~~~~~~----------------~~~~l~~~d~~~ 268 (710)
T 2xdw_A 238 AELSDDGRYVLLSIREGCD----------------PVNRLWYCDLQQ 268 (710)
T ss_dssp EEECTTSCEEEEEEECSSS----------------SCCEEEEEEGGG
T ss_pred EEEcCCCCEEEEEEEccCC----------------CccEEEEEECcc
Confidence 3478999999987653110 134688999987
No 89
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=52.65 E-value=1.9e+02 Score=29.02 Aligned_cols=113 Identities=8% Similarity=0.132 Sum_probs=63.0
Q ss_pred eeeeCCC-CCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEc---cCCCeeeeeeEEEE
Q 009589 51 FRKFTDD-GQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTL---ASCNELICKDFFLS 126 (531)
Q Consensus 51 lRKFTpD-G~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l---~~~~e~L~refsLf 126 (531)
-=.|+|| |++|++-+.|. .|.||.... +.. ...+.- .+.+...+ .-|
T Consensus 211 ~~~~~~~~~~~l~~~~~dg-~i~vwd~~~-------~~~------------------~~~~~~~~~~~~~~v~~---~~~ 261 (615)
T 1pgu_A 211 DVEFSPDSGEFVITVGSDR-KISCFDGKS-------GEF------------------LKYIEDDQEPVQGGIFA---LSW 261 (615)
T ss_dssp EEEECSTTCCEEEEEETTC-CEEEEETTT-------CCE------------------EEECCBTTBCCCSCEEE---EEE
T ss_pred EEEECCCCCCEEEEEeCCC-eEEEEECCC-------CCE------------------eEEecccccccCCceEE---EEE
Confidence 3478999 99988887764 677877641 100 000000 12222222 223
Q ss_pred ecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeecc-----ceEEeeecceeeeecceeee
Q 009589 127 MEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHN-----DFINLAHNMGVFLYDDLLAI 201 (531)
Q Consensus 127 t~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~-----D~I~LsHN~Gv~L~~dlLaI 201 (531)
. +|++++.++.. =++.++|+.+|.......... ..+.+... -++.|++
T Consensus 262 ~-~~~~l~~~~~d---------------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~ 314 (615)
T 1pgu_A 262 L-DSQKFATVGAD---------------------ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-----GNGRIIS 314 (615)
T ss_dssp S-SSSEEEEEETT---------------------SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-----ETTEEEE
T ss_pred c-CCCEEEEEcCC---------------------CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-----CCCeEEE
Confidence 3 88888876432 248899999998876666551 12222211 4455555
Q ss_pred eeecccEEEEEEEccCCeEE
Q 009589 202 VSLRYQTIHILQVRDLGNLV 221 (531)
Q Consensus 202 LS~q~QtIhi~qI~~~G~fv 221 (531)
-+ ...+|+++.+.. |+.+
T Consensus 315 ~~-~~g~i~~~d~~~-~~~~ 332 (615)
T 1pgu_A 315 LS-LDGTLNFYELGH-DEVL 332 (615)
T ss_dssp EE-TTSCEEEEETTE-EEEE
T ss_pred EE-CCCCEEEEECCC-CcEE
Confidence 44 457888888764 4443
No 90
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=52.39 E-value=59 Score=31.71 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=19.0
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.|+|||++|++=|.|. .|.|+...
T Consensus 134 ~~spdg~~l~sgs~d~-~i~iwd~~ 157 (344)
T 4gqb_B 134 SVLSSGTQAVSGSKDI-CIKVWDLA 157 (344)
T ss_dssp EECTTSSEEEEEETTS-CEEEEETT
T ss_pred EECCCCCEEEEEeCCC-eEEEEECC
Confidence 5899999999888776 57777654
No 91
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=52.00 E-value=94 Score=28.60 Aligned_cols=25 Identities=24% Similarity=0.211 Sum_probs=20.8
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-+|+|||++|++-+.| ..|.||...
T Consensus 17 ~~~s~~~~~l~~~~~d-~~v~iw~~~ 41 (342)
T 1yfq_A 17 IKIIPSKSLLLITSWD-GSLTVYKFD 41 (342)
T ss_dssp EEEEGGGTEEEEEETT-SEEEEEEEE
T ss_pred EEEcCCCCEEEEEcCC-CeEEEEEeC
Confidence 3699999999888877 568899886
No 92
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=50.31 E-value=1.4e+02 Score=26.86 Aligned_cols=105 Identities=14% Similarity=0.169 Sum_probs=60.5
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecCceE
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgry 132 (531)
-||||| +||.+.|. .|.|+... + ++ ...++.+...+..+. +.-|..+|++
T Consensus 32 ~WS~~~--~lAvg~D~-tV~iWd~~--t-----g~------------------~~~~~~~~~~~~~V~--~v~~~~~~~~ 81 (318)
T 4ggc_A 32 DWSSGN--VLAVALDN-SVYLWSAS--S-----GD------------------ILQLLQMEQPGEYIS--SVAWIKEGNY 81 (318)
T ss_dssp EECTTS--EEEEEETT-EEEEEETT--T-----CC------------------EEEEEECCSTTCCEE--EEEECTTSSE
T ss_pred EECCCC--EEEEEeCC-EEEEEECC--C-----CC------------------EEEEEEecCCCCeEE--EEEECCCCCE
Confidence 489987 78888875 58888764 1 11 111222222222221 4567789998
Q ss_pred EEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeeecccEEEEE
Q 009589 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHIL 212 (531)
Q Consensus 133 vivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~QtIhi~ 212 (531)
++.|+.- -++.|+|+++|...-...-+.+.+.- +...+++|+.-|-. -++.+.
T Consensus 82 l~sgs~D---------------------g~v~iw~~~~~~~~~~~~~h~~~~~~-----~~~~~~~l~s~~~~-~~~~~~ 134 (318)
T 4ggc_A 82 LAVGTSS---------------------AEVQLWDVQQQKRLRNMTSHSARVGS-----LSWNSYILSSGSRS-GHIHHH 134 (318)
T ss_dssp EEEEETT---------------------SEEEEEETTTTEEEEEEECCSSCEEE-----EEEETTEEEEEETT-SEEEEE
T ss_pred EEEEECC---------------------CcEEEeecCCceeEEEecCccceEEE-----eecCCCEEEEEecC-CceEee
Confidence 8765433 35889999999887766655554432 33445566654443 344444
Q ss_pred EE
Q 009589 213 QV 214 (531)
Q Consensus 213 qI 214 (531)
..
T Consensus 135 ~~ 136 (318)
T 4ggc_A 135 DV 136 (318)
T ss_dssp ET
T ss_pred ec
Confidence 43
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=50.05 E-value=1.9e+02 Score=28.03 Aligned_cols=111 Identities=9% Similarity=0.077 Sum_probs=63.5
Q ss_pred eCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEcc-CCCeeeeeeEEEEecCceE
Q 009589 54 FTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLA-SCNELICKDFFLSMEGNQF 132 (531)
Q Consensus 54 FTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~-~~~e~L~refsLft~dgry 132 (531)
++|||++|++-+.|. .|.||...... ...++... +.+... +.-|..+|++
T Consensus 178 ~~~~~~~l~~~~~d~-~i~iwd~~~~~-------------------------~~~~~~~~~h~~~v~---~~~~s~~~~~ 228 (437)
T 3gre_A 178 VNEEKSLLVALTNLS-RVIIFDIRTLE-------------------------RLQIIENSPRHGAVS---SICIDEECCV 228 (437)
T ss_dssp ECSSCEEEEEEETTS-EEEEEETTTCC-------------------------EEEEEECCGGGCCEE---EEEECTTSCE
T ss_pred EcCCCCEEEEEeCCC-eEEEEeCCCCe-------------------------eeEEEccCCCCCceE---EEEECCCCCE
Confidence 678899888887764 67888775100 01111110 111111 3346778888
Q ss_pred EEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee---------cceeeeee
Q 009589 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY---------DDLLAIVS 203 (531)
Q Consensus 133 vivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~---------~dlLaILS 203 (531)
++.|+.- =++.++|+.+|....+..+.. +.+|.-. +.+||. +
T Consensus 229 l~s~~~d---------------------g~i~iwd~~~~~~~~~~~~~~-------~~~v~~~~~~~~~s~~~~~l~s-~ 279 (437)
T 3gre_A 229 LILGTTR---------------------GIIDIWDIRFNVLIRSWSFGD-------HAPITHVEVCQFYGKNSVIVVG-G 279 (437)
T ss_dssp EEEEETT---------------------SCEEEEETTTTEEEEEEBCTT-------CEEEEEEEECTTTCTTEEEEEE-E
T ss_pred EEEEcCC---------------------CeEEEEEcCCccEEEEEecCC-------CCceEEEEeccccCCCccEEEE-E
Confidence 8876543 248899999998877655433 3233211 224443 3
Q ss_pred ecccEEEEEEEccCCeEEEe
Q 009589 204 LRYQTIHILQVRDLGNLVDV 223 (531)
Q Consensus 204 ~q~QtIhi~qI~~~G~fv~v 223 (531)
-.-.+|+|+.+.. |+.+..
T Consensus 280 ~~dg~i~iwd~~~-~~~~~~ 298 (437)
T 3gre_A 280 SSKTFLTIWNFVK-GHCQYA 298 (437)
T ss_dssp STTEEEEEEETTT-TEEEEE
T ss_pred cCCCcEEEEEcCC-CcEEEE
Confidence 3456899999874 665443
No 94
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=49.85 E-value=83 Score=31.08 Aligned_cols=26 Identities=4% Similarity=0.096 Sum_probs=20.7
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-.|+|+|+++++-+..-..+.||..+
T Consensus 256 v~~~p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp EEECTTCSSEEEEEETTSBCCEEETT
T ss_pred eeecCCCceEEEEecCcceeeEEecc
Confidence 36999999888777666778898876
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=49.57 E-value=38 Score=32.21 Aligned_cols=23 Identities=17% Similarity=0.492 Sum_probs=20.4
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.|+|||++|++-|.| .|.||..+
T Consensus 221 ~fs~~g~~l~s~~~~--~v~iwd~~ 243 (343)
T 3lrv_A 221 KFADNGYWMVVECDQ--TVVCFDLR 243 (343)
T ss_dssp EECTTSSEEEEEESS--BEEEEETT
T ss_pred EEeCCCCEEEEEeCC--eEEEEEcC
Confidence 699999999999955 89999887
No 96
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=49.31 E-value=1.6e+02 Score=27.05 Aligned_cols=26 Identities=23% Similarity=0.396 Sum_probs=20.3
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-=+|+|||++|++-|.|. .+.||...
T Consensus 28 ~~~~s~~~~~l~s~~~dg-~i~iw~~~ 53 (312)
T 4ery_A 28 SVKFSPNGEWLASSSADK-LIKIWGAY 53 (312)
T ss_dssp EEEECTTSSEEEEEETTS-CEEEEETT
T ss_pred EEEECCCCCEEEEeeCCC-eEEEEeCC
Confidence 346999999998888775 57888764
No 97
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=48.38 E-value=1.2e+02 Score=32.97 Aligned_cols=25 Identities=12% Similarity=0.208 Sum_probs=20.5
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
=.|+|||++|++-+.| ..|.||...
T Consensus 15 l~~s~dg~~latg~~d-g~I~vwd~~ 39 (753)
T 3jro_A 15 AVLDYYGKRLATCSSD-KTIKIFEVE 39 (753)
T ss_dssp ECCCSSSCCEEEEETT-TEEEEEEEE
T ss_pred EEECCCCCeEEEEECC-CcEEEEecC
Confidence 3599999999888776 578999876
No 98
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=48.08 E-value=2.2e+02 Score=30.48 Aligned_cols=55 Identities=11% Similarity=-0.019 Sum_probs=32.3
Q ss_pred eEEEEEEEccCCeEee--eeeeccceEEeeecceeeeecceeeeeeecccEEEEEEEccCCe
Q 009589 160 KITFHLLRLEDGVVLD--EKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGN 219 (531)
Q Consensus 160 ~ytfhlVdL~~G~v~D--~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~QtIhi~qI~~~G~ 219 (531)
+..++.+|+.+|...+ ..+-..+.+ + ++...++.|++.+...-.-.|+.+.-+|.
T Consensus 304 ~~~l~~~d~~~~~~~~~~~l~~~~~~~-~----~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 304 NRRLVTVDAANPGPAHWRDLIPERQQV-L----TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp TCEEEEEETTSCCGGGCEEEECCCSSC-E----EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred CCEEEEEeCCCCCccccEEEecCCCCE-E----EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 4678999999885421 122222222 2 78888998888877764434444433344
No 99
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=45.40 E-value=99 Score=29.38 Aligned_cols=133 Identities=17% Similarity=0.077 Sum_probs=0.0
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeE---------
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDF--------- 123 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~ref--------- 123 (531)
.|+|||+++++-+.....|.||...-............+...+..-.|.. ..-.+.+....++...-=|.
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNP-TDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECT-TTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcC-CCCCEEEEEcCCCcEEEEECCCCcccccc
Q ss_pred --------------------------EEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeee
Q 009589 124 --------------------------FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEK 177 (531)
Q Consensus 124 --------------------------sLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~ 177 (531)
.-|..||++ +++ ++=+++++|+.+|....+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~----s~s-------------------~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 290 IIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL----LLN-------------------DKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp EECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT----CTT-------------------CCCCEEEEETTTCCEEEEE
T ss_pred ccccccccccccceEEeccCCCCceEEEecCCccc----ccC-------------------CCCeEEEEecCCCceeeee
Q ss_pred eeccceEEeeecceeee-----ecceeeeeeecccEEEEEEEccC
Q 009589 178 VFHNDFINLAHNMGVFL-----YDDLLAIVSLRYQTIHILQVRDL 217 (531)
Q Consensus 178 ~f~~D~I~LsHN~Gv~L-----~~dlLaILS~q~QtIhi~qI~~~ 217 (531)
.-.. |..-+.+ -+.+||.-| -.+|.|+.+...
T Consensus 347 ~~~~------~~~~~~~~~~s~~g~~l~s~s--d~~i~iw~~~~~ 383 (383)
T 3ei3_B 347 RDPN------AAGIISLNKFSPTGDVLASGM--GFNILIWNREDT 383 (383)
T ss_dssp CBTT------BCSCCCEEEECTTSSEEEEEE--TTEEEEEECC--
T ss_pred cCCC------CCceEEEEEEecCccEEEEec--CCcEEEEecCCC
No 100
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=44.11 E-value=71 Score=33.62 Aligned_cols=32 Identities=9% Similarity=0.011 Sum_probs=22.5
Q ss_pred EEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCe
Q 009589 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGV 172 (531)
Q Consensus 124 sLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~ 172 (531)
.-|..||++++++++... .| -+++++|+.+|.
T Consensus 406 ~~~spdg~~l~~~~~~~~-------------~p----~~i~l~d~~~~~ 437 (706)
T 2z3z_A 406 TQLSPDGSAIIDIFQSPT-------------VP----RKVTVTNIGKGS 437 (706)
T ss_dssp EEECTTSSEEEEEEECSS-------------CS----CEEEEEESSSCE
T ss_pred EEECCCCCEEEEEecCCC-------------CC----cEEEEEECCCCe
Confidence 457789999988655521 11 258889999887
No 101
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=44.11 E-value=1.5e+02 Score=29.18 Aligned_cols=25 Identities=16% Similarity=0.075 Sum_probs=20.6
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-.|+|||++|++=|.|. .|.||.+.
T Consensus 114 ~~~~p~~~~l~s~s~Dg-~i~vwd~~ 138 (410)
T 1vyh_C 114 VIFHPVFSVMVSASEDA-TIKVWDYE 138 (410)
T ss_dssp EEECSSSSEEEEEESSS-CEEEEETT
T ss_pred EEEcCCCCEEEEEeCCC-eEEEEECC
Confidence 36999999999888876 68888875
No 102
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=44.10 E-value=1.4e+02 Score=29.40 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=19.1
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.|+|||++|++=|.|. .+.||...
T Consensus 157 ~~~~~~~~l~sgs~D~-~i~iwd~~ 180 (410)
T 1vyh_C 157 SFDHSGKLLASCSADM-TIKLWDFQ 180 (410)
T ss_dssp EECTTSSEEEEEETTS-CCCEEETT
T ss_pred EEcCCCCEEEEEeCCC-eEEEEeCC
Confidence 6899999888888774 57788775
No 103
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=43.87 E-value=2.2e+02 Score=27.10 Aligned_cols=26 Identities=19% Similarity=0.188 Sum_probs=20.0
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
--.|+|||++|++=+.|. .|.||...
T Consensus 252 ~~~~s~~~~~l~~~~~dg-~i~i~d~~ 277 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGHVSG-VITVHNVF 277 (420)
T ss_dssp TTCSSCTTEEEEEEETTS-CEEEEETT
T ss_pred ceEEcCCCCEEEEEcCCC-eEEEEECC
Confidence 346899999998877665 48888876
No 104
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=43.69 E-value=1.5e+02 Score=27.78 Aligned_cols=24 Identities=8% Similarity=0.119 Sum_probs=20.4
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.|+|||++|++-|.| ..|.||...
T Consensus 153 ~~~~~~~~l~~~~~d-~~i~iwd~~ 176 (377)
T 3dwl_C 153 DWHPNNVLLAAGCAD-RKAYVLSAY 176 (377)
T ss_dssp EECTTSSEEEEEESS-SCEEEEEEC
T ss_pred EEcCCCCEEEEEeCC-CEEEEEEEE
Confidence 599999999988887 568899885
No 105
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=43.24 E-value=1.9e+02 Score=27.65 Aligned_cols=119 Identities=8% Similarity=0.012 Sum_probs=0.0
Q ss_pred eeCCCCCeEEEeeCC---------CceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeE
Q 009589 53 KFTDDGQYLISFSRN---------HQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDF 123 (531)
Q Consensus 53 KFTpDG~yLIaFS~d---------q~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~ref 123 (531)
.|+|||+.+++=..+ ...|.++... . .+...++.+..+. .=..
T Consensus 178 ~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~--------t-----------------~~v~~~~~~~~g~---~p~~ 229 (328)
T 3dsm_A 178 VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE--------T-----------------FTVEKQFKFKLGD---WPSE 229 (328)
T ss_dssp EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT--------T-----------------TEEEEEEECCTTC---CCEE
T ss_pred EEcCCCCEEEEECCCccCCccccCCceEEEEECC--------C-----------------CeEEEEEecCCCC---Ccee
Q ss_pred EEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeee--ecceeee
Q 009589 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFL--YDDLLAI 201 (531)
Q Consensus 124 sLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L--~~dlLaI 201 (531)
.-+..||+++.++..+ ++++|+++|.+.....+... ...-.|+.+ -+..|-|
T Consensus 230 la~~~d~~~lyv~~~~-----------------------v~~~d~~t~~~~~~~~~~~~---~~~p~gi~vdp~~g~lyv 283 (328)
T 3dsm_A 230 VQLNGTRDTLYWINND-----------------------IWRMPVEADRVPVRPFLEFR---DTKYYGLTVNPNNGEVYV 283 (328)
T ss_dssp EEECTTSCEEEEESSS-----------------------EEEEETTCSSCCSSCSBCCC---SSCEEEEEECTTTCCEEE
T ss_pred EEEecCCCEEEEEccE-----------------------EEEEECCCCceeeeeeecCC---CCceEEEEEcCCCCeEEE
Q ss_pred ee----ecccEEEEEEEccCCeEEEeeeeC
Q 009589 202 VS----LRYQTIHILQVRDLGNLVDVRTIG 227 (531)
Q Consensus 202 LS----~q~QtIhi~qI~~~G~fv~vrtIG 227 (531)
-. ...-+|++|... |+++..=.+|
T Consensus 284 a~~~~y~~~~~V~v~d~~--g~~~~~i~~G 311 (328)
T 3dsm_A 284 ADAIDYQQQGIVYRYSPQ--GKLIDEFYVG 311 (328)
T ss_dssp EECTTSSSEEEEEEECTT--CCEEEEEEEE
T ss_pred EcccccccCCEEEEECCC--CCEEEEEEec
No 106
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=42.86 E-value=83 Score=33.67 Aligned_cols=106 Identities=15% Similarity=-0.042 Sum_probs=60.0
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccC--------CCeee---ee
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLAS--------CNELI---CK 121 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~--------~~e~L---~r 121 (531)
.+|||||+|-+=....-+|.||+-..+.. . ++.-++.+-. .|..+ =|
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~-~---------------------~lv~~I~tGG~~~~~~~~~G~~~~ggPr 384 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFK-P---------------------VLTGKVKLGGIFHRADHPAGHKLTGAPQ 384 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTS-C---------------------EEEEEEECBTTTTCBCCTTSCCCCSCCC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCC-c---------------------EEEEEEEeCCeeccccccccccCCCCCC
Confidence 39999999999999999999998752110 0 0111111110 11111 24
Q ss_pred eEEEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEE--EccCCeEeeeeeeccceE-Eeeec
Q 009589 122 DFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLL--RLEDGVVLDEKVFHNDFI-NLAHN 189 (531)
Q Consensus 122 efsLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlV--dL~~G~v~D~~~f~~D~I-~LsHN 189 (531)
++. ++.||++++||.+- +.. ... +=+|.=.+.++..+ |-++| +.....|..|+- .++|.
T Consensus 385 ~~~-lSpDGk~LyVaNsl-~~~--wd~----Qfyp~~~~~~~~~~~vd~~~G-L~~~~~f~vdf~~~~~h~ 446 (462)
T 2ece_A 385 MLE-ISRDGRRVYVTNSL-YST--WDN----QFYPEGLKGWMVKLNANPSGG-LEIDKEFFVDFGEARSHQ 446 (462)
T ss_dssp CEE-ECTTSSEEEEECCC-CHH--HHH----HHSTTCCCCEEEEEEECTTSC-EEEEEEEEEECTTSEEEE
T ss_pred EEE-EcCCCCEEEEEcCC-ccc--ccc----cccCCCCceEEEEEEecCCCC-ceeCCCEEeecccCccee
Confidence 444 56799999997642 000 000 00222234555544 77899 888888888874 45553
No 107
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=42.54 E-value=2.4e+02 Score=27.10 Aligned_cols=125 Identities=8% Similarity=0.103 Sum_probs=67.5
Q ss_pred eeeeCCCCCeEEEe-e-CCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEec
Q 009589 51 FRKFTDDGQYLISF-S-RNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSME 128 (531)
Q Consensus 51 lRKFTpDG~yLIaF-S-~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~ 128 (531)
--.|+|||++|++= + .....|.||....... +. ....+...+... ...|..
T Consensus 225 ~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~------------~~------------~~~~~~~~~~v~---~~~~s~ 277 (402)
T 2aq5_A 225 HAVFVSEGKILTTGFSRMSERQVALWDTKHLEE------------PL------------SLQELDTSSGVL---LPFFDP 277 (402)
T ss_dssp EEEECSTTEEEEEEECTTCCEEEEEEETTBCSS------------CS------------EEEECCCCSSCE---EEEEET
T ss_pred EEEEcCCCcEEEEeccCCCCceEEEEcCccccC------------Cc------------eEEeccCCCcee---EEEEcC
Confidence 34589999877763 2 4567788888762111 00 011111222221 345778
Q ss_pred CceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCe--EeeeeeeccceEEeeecceeeeecceeeeeeecc
Q 009589 129 GNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGV--VLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRY 206 (531)
Q Consensus 129 dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~--v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~ 206 (531)
||+++++++.. +=+++++|+.+|. +.--..++.+ ..-.++....|-..+++ ..
T Consensus 278 ~~~~l~~~g~~--------------------dg~i~i~d~~~~~~~~~~l~~~~~~----~~v~~~~~sp~~~~~~s-~~ 332 (402)
T 2aq5_A 278 DTNIVYLCGKG--------------------DSSIRYFEITSEAPFLHYLSMFSSK----ESQRGMGYMPKRGLEVN-KC 332 (402)
T ss_dssp TTTEEEEEETT--------------------CSCEEEEEECSSTTCEEEEEEECCS----SCCSEEEECCGGGSCGG-GT
T ss_pred CCCEEEEEEcC--------------------CCeEEEEEecCCCcceEeecccccC----CcccceEEeccccccee-cc
Confidence 99988775432 1247888888887 3222222211 01123333333333333 44
Q ss_pred cEEEEEEEccCCeEEEeeeeCC
Q 009589 207 QTIHILQVRDLGNLVDVRTIGS 228 (531)
Q Consensus 207 QtIhi~qI~~~G~fv~vrtIG~ 228 (531)
.+|.+|.+.. |+...+..+.+
T Consensus 333 ~~~~~~~l~~-~~~~~i~~~~p 353 (402)
T 2aq5_A 333 EIARFYKLHE-RKCEPIAMTVP 353 (402)
T ss_dssp EEEEEEEEET-TEEEEEEEECC
T ss_pred eeEEEEEcCC-CcEEEEEEEcc
Confidence 5999999985 78777765555
No 108
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=42.04 E-value=2.9e+02 Score=29.16 Aligned_cols=25 Identities=20% Similarity=0.432 Sum_probs=20.2
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-.|+|||++|++=|.|. .|.||...
T Consensus 478 ~~~s~~~~~l~s~s~D~-~i~iwd~~ 502 (694)
T 3dm0_A 478 VAFSLDNRQIVSASRDR-TIKLWNTL 502 (694)
T ss_dssp EEECTTSSCEEEEETTS-CEEEECTT
T ss_pred EEEeCCCCEEEEEeCCC-EEEEEECC
Confidence 36999999999988875 57888754
No 109
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=41.96 E-value=2.1e+02 Score=26.41 Aligned_cols=26 Identities=4% Similarity=-0.050 Sum_probs=20.6
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
--.|+|||++|++-+.| ..+.||.+.
T Consensus 101 ~~~~~~~~~~l~~~~~d-~~v~i~d~~ 126 (372)
T 1k8k_C 101 CVRWAPNEKKFAVGSGS-RVISICYFE 126 (372)
T ss_dssp EEEECTTSSEEEEEETT-SSEEEEEEE
T ss_pred EEEECCCCCEEEEEeCC-CEEEEEEec
Confidence 34799999998888766 568888886
No 110
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=41.31 E-value=72 Score=29.44 Aligned_cols=28 Identities=7% Similarity=0.062 Sum_probs=20.3
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeecC
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPMW 78 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~g 78 (531)
--.|+|||+++++-+.....+.||....
T Consensus 264 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 264 QVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred EEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 3469999995555555556899999873
No 111
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=40.61 E-value=1.3e+02 Score=31.55 Aligned_cols=109 Identities=13% Similarity=0.048 Sum_probs=0.0
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeee-----------
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICK----------- 121 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~r----------- 121 (531)
+|||||++|++=|.|.+ +.|+.......... .....+..+..+-.|.. .-++......+++...+
T Consensus 66 ~~spdg~~lasg~~d~~-v~lWd~~~~~~~~~-~~~~~~~~~v~~v~fs~--dg~~l~~~~~~~~~~~~v~~wd~~~~~~ 141 (611)
T 1nr0_A 66 KTSPSGYYCASGDVHGN-VRIWDTTQTTHILK-TTIPVFSGPVKDISWDS--ESKRIAAVGEGRERFGHVFLFDTGTSNG 141 (611)
T ss_dssp EECTTSSEEEEEETTSE-EEEEESSSTTCCEE-EEEECSSSCEEEEEECT--TSCEEEEEECCSSCSEEEEETTTCCBCB
T ss_pred EECCCCcEEEEEeCCCC-EEEeECCCCcceee-EeecccCCceEEEEECC--CCCEEEEEECCCCceeEEEEeeCCCCcc
Q ss_pred ---------eEEEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEE
Q 009589 122 ---------DFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFIN 185 (531)
Q Consensus 122 ---------efsLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~ 185 (531)
-+.-|..+|.+.|+.++. |-++.|+|+.+|...-...=+.+.|.
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~--------------------D~~v~lwd~~~~~~~~~l~~H~~~V~ 194 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSD--------------------DNTVAIFEGPPFKFKSTFGEHTKFVH 194 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEET--------------------TSCEEEEETTTBEEEEEECCCSSCEE
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeC--------------------CCeEEEEECCCCeEeeeeccccCceE
No 112
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=40.51 E-value=1e+02 Score=34.78 Aligned_cols=26 Identities=4% Similarity=0.121 Sum_probs=17.5
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
--.|||||++|+.-+.+ ..|.++...
T Consensus 383 ~~~~SpDG~~la~~~~~-~~v~~~d~~ 408 (1045)
T 1k32_A 383 AMGVDRNGKFAVVANDR-FEIMTVDLE 408 (1045)
T ss_dssp EEEECTTSSEEEEEETT-SEEEEEETT
T ss_pred eeEECCCCCEEEEECCC-CeEEEEECC
Confidence 44689999988755544 466666554
No 113
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=40.23 E-value=71 Score=31.06 Aligned_cols=61 Identities=13% Similarity=0.169 Sum_probs=48.1
Q ss_pred EEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeeecccEEEEEEEccCCeEEEeeeeC
Q 009589 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIG 227 (531)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~QtIhi~qI~~~G~fv~vrtIG 227 (531)
++..||+++|++..+..+.... .+ .|+.+.++.|-+|.-+..+|++|... +++.+..=+.|
T Consensus 44 ~v~~vD~~tgkv~~~~~l~~~~--fg--eGi~~~~~~ly~ltw~~~~v~v~D~~-tl~~~~ti~~~ 104 (243)
T 3mbr_X 44 SVRKVDLETGRILQRAEVPPPY--FG--AGIVAWRDRLIQLTWRNHEGFVYDLA-TLTPRARFRYP 104 (243)
T ss_dssp EEEEEETTTCCEEEEEECCTTC--CE--EEEEEETTEEEEEESSSSEEEEEETT-TTEEEEEEECS
T ss_pred eEEEEECCCCCEEEEEeCCCCc--ce--eEEEEeCCEEEEEEeeCCEEEEEECC-cCcEEEEEeCC
Confidence 5889999999999988776642 22 48999999999999999999999865 46665544444
No 114
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=38.65 E-value=2.6e+02 Score=26.40 Aligned_cols=26 Identities=12% Similarity=0.171 Sum_probs=20.8
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
--.|+|||++|++=+.| ..+.||...
T Consensus 102 ~~~~s~~~~~l~s~~~d-~~v~iw~~~ 127 (340)
T 1got_B 102 TCAYAPSGNYVACGGLD-NICSIYNLK 127 (340)
T ss_dssp EEEECTTSSEEEEEETT-CEEEEEETT
T ss_pred EEEECCCCCEEEEEeCC-CeEEEEECc
Confidence 34699999999988877 568888765
No 115
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=36.94 E-value=2.5e+02 Score=25.82 Aligned_cols=32 Identities=9% Similarity=0.099 Sum_probs=23.4
Q ss_pred cceeeeeeecccEEEEEEEccCCeEEEeeeeCC
Q 009589 196 DDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGS 228 (531)
Q Consensus 196 ~dlLaILS~q~QtIhi~qI~~~G~fv~vrtIG~ 228 (531)
+..||+-+- -.+|+||.+..+|++..+..+..
T Consensus 268 g~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 268 GNVLALSGG-DNKVTLWKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp SCCEEEEES-SSSEEEEEEEETTEEEEEEEEC-
T ss_pred CCEEEEecC-CCcEEEEeCCCCCccccccceec
Confidence 345666665 57899999987788888777654
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=36.87 E-value=2.3e+02 Score=25.34 Aligned_cols=26 Identities=12% Similarity=0.142 Sum_probs=20.9
Q ss_pred eeeCC--CCCeEEEeeCCCceEEEEeecC
Q 009589 52 RKFTD--DGQYLISFSRNHQDLIVYRPMW 78 (531)
Q Consensus 52 RKFTp--DG~yLIaFS~dq~~L~vYry~g 78 (531)
=+|+| ||++|++-|.| ..|.||....
T Consensus 63 ~~~~~~~d~~~l~s~~~d-g~v~vwd~~~ 90 (351)
T 3f3f_A 63 IDWASPEYGRIIASASYD-KTVKLWEEDP 90 (351)
T ss_dssp EEECCGGGCSEEEEEETT-SCEEEEEECT
T ss_pred EEEcCCCCCCEEEEEcCC-CeEEEEecCC
Confidence 37899 79999888887 4689999873
No 117
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=36.44 E-value=1e+02 Score=31.84 Aligned_cols=39 Identities=10% Similarity=-0.055 Sum_probs=27.4
Q ss_pred EEEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeec
Q 009589 123 FFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFH 180 (531)
Q Consensus 123 fsLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~ 180 (531)
-..|+.||+++.|+.... +=++.+||++++++..+....
T Consensus 141 ~~a~spDGk~lyVan~~~-------------------~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 141 MTSLTPDGKTLLFYQFSP-------------------APAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp GEEECTTSSEEEEEECSS-------------------SCEEEEEETTTTEEEEEEECC
T ss_pred eEEEcCCCCEEEEEEcCC-------------------CCeEEEEECCCCcEEEEEECC
Confidence 467889999999964331 125677888888888776553
No 118
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=31.64 E-value=3.7e+02 Score=26.12 Aligned_cols=25 Identities=12% Similarity=0.167 Sum_probs=20.4
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-.|+|||++|++-|.|. .|.||...
T Consensus 316 ~~~~~~~~~l~sg~~dg-~i~vwd~~ 340 (464)
T 3v7d_B 316 TIYDHERKRCISASMDT-TIRIWDLE 340 (464)
T ss_dssp EEEETTTTEEEEEETTS-CEEEEETT
T ss_pred EEEcCCCCEEEEEeCCC-cEEEEECC
Confidence 46899999999888875 58888875
No 119
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=31.05 E-value=3e+02 Score=24.88 Aligned_cols=84 Identities=11% Similarity=0.044 Sum_probs=49.6
Q ss_pred EEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeee--cceeee
Q 009589 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAI 201 (531)
Q Consensus 124 sLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~--~dlLaI 201 (531)
.-+..||+++++++.. +-+++++|+.+|.+..+..+...-.+-.+-.++.+- ++.|++
T Consensus 39 ~~~s~dg~~l~v~~~~--------------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 98 (337)
T 1pby_B 39 PMVAPGGRIAYATVNK--------------------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAI 98 (337)
T ss_dssp EEECTTSSEEEEEETT--------------------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEE
T ss_pred eEEcCCCCEEEEEeCC--------------------CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEE
Confidence 4477899988775422 125889999999987766553211111122344443 445666
Q ss_pred eee-----------cccEEEEEEEccCCeEEEeeeeCC
Q 009589 202 VSL-----------RYQTIHILQVRDLGNLVDVRTIGS 228 (531)
Q Consensus 202 LS~-----------q~QtIhi~qI~~~G~fv~vrtIG~ 228 (531)
.+- ...+|+++.+. +|+.+..-..|.
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~v~d~~-~~~~~~~~~~~~ 135 (337)
T 1pby_B 99 YESPVRLELTHFEVQPTRVALYDAE-TLSRRKAFEAPR 135 (337)
T ss_dssp EEEEEEECSSCEEECCCEEEEEETT-TTEEEEEEECCS
T ss_pred EecccccccccccccCceEEEEECC-CCcEEEEEeCCC
Confidence 642 24788888875 577665544443
No 120
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=31.02 E-value=34 Score=31.49 Aligned_cols=25 Identities=20% Similarity=0.248 Sum_probs=20.6
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
=.|+|||++|++=|.|. .|.||+-.
T Consensus 312 l~~s~dg~~l~sgs~Dg-~v~iW~~~ 336 (340)
T 4aow_A 312 LAWSADGQTLFAGYTDN-LVRVWQVT 336 (340)
T ss_dssp EEECTTSSEEEEEETTS-CEEEEEEE
T ss_pred EEECCCCCEEEEEeCCC-EEEEEeCC
Confidence 36999999999988885 58888754
No 121
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=30.98 E-value=34 Score=32.47 Aligned_cols=25 Identities=24% Similarity=0.341 Sum_probs=20.1
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-.|||||++|++=|.|. .|.||+-.
T Consensus 292 ~~~spdg~~l~sg~~Dg-~i~vWd~~ 316 (319)
T 3frx_A 292 LAWSADGQTLFAGYTDN-VIRVWQVM 316 (319)
T ss_dssp EEECTTSSEEEEEETTS-CEEEEEEE
T ss_pred EEECCCCCEEEEeecCc-eEEEEEEe
Confidence 47999999999988886 47777653
No 122
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=30.73 E-value=3e+02 Score=24.73 Aligned_cols=28 Identities=18% Similarity=0.158 Sum_probs=22.0
Q ss_pred ceeeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 49 HSFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 49 ~~lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
...-.|+++|++|++-+.|. .+.||...
T Consensus 153 ~~~~~~~~~~~~l~s~~~d~-~i~iwd~~ 180 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASGGNDN-LVNVWPSA 180 (318)
T ss_dssp EEEEEECTTSSEEEEEETTS-CEEEEESS
T ss_pred eEEEEEcCCCCEEEEEecCc-ceeEEECC
Confidence 45667999999999888775 57888765
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=30.69 E-value=32 Score=35.55 Aligned_cols=24 Identities=17% Similarity=0.362 Sum_probs=20.0
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEee
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRP 76 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry 76 (531)
=.|||||++|++=|.| ..+.||++
T Consensus 332 vafSPDG~~LaSGS~D-~TIklWd~ 355 (356)
T 2w18_A 332 VKWSGTDSHLLAGQKD-GNIFVYHY 355 (356)
T ss_dssp EEECSSSSEEEEECTT-SCEEEEEE
T ss_pred EEECCCCCEEEEEECC-CcEEEecC
Confidence 3799999999988877 57888876
No 124
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=30.57 E-value=1e+02 Score=30.35 Aligned_cols=61 Identities=11% Similarity=0.166 Sum_probs=47.5
Q ss_pred EEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeeecccEEEEEEEccCCeEEEeeeeC
Q 009589 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIG 227 (531)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~QtIhi~qI~~~G~fv~vrtIG 227 (531)
++..||+++|++..+..+.... .+ .|+.+.+|.|-++.-+..++.+|... +++.+..=..|
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~~~--Fg--eGit~~g~~ly~ltw~~~~v~v~D~~-t~~~~~ti~~~ 126 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGKRY--FG--EGISDWKDKIVGLTWKNGLGFVWNIR-NLRQVRSFNYD 126 (262)
T ss_dssp EEEEECTTTCCEEEEEECCTTC--CE--EEEEEETTEEEEEESSSSEEEEEETT-TCCEEEEEECS
T ss_pred eEEEEECCCCcEEEEEecCCcc--ce--eEEEEeCCEEEEEEeeCCEEEEEECc-cCcEEEEEECC
Confidence 5889999999999988775431 22 48999999999999999999999876 46665544444
No 125
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=30.44 E-value=45 Score=31.70 Aligned_cols=26 Identities=23% Similarity=0.503 Sum_probs=22.8
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 52 RKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
-.|+|||++|++-|.+...+.||++.
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEc
Confidence 46999999999999856679999996
No 126
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=27.92 E-value=3.3e+02 Score=24.31 Aligned_cols=56 Identities=11% Similarity=0.057 Sum_probs=32.9
Q ss_pred EEEEEEccCCeEeeeeeeccceEEeeecceeeeecc-eeeeeeecccEEEEEEEccCCeEEEee
Q 009589 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDD-LLAIVSLRYQTIHILQVRDLGNLVDVR 224 (531)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~d-lLaILS~q~QtIhi~qI~~~G~fv~vr 224 (531)
+++++|+.+|........+.+.|. ++....| -|++ +-.-.+|+|+.+.. |+.+...
T Consensus 247 ~v~iwd~~~~~~~~~~~~~~~~i~-----~~~~~~~~~~~~-~~~dg~i~iw~~~~-~~~~~~~ 303 (313)
T 3odt_A 247 TVRIWSKENGSLKQVITLPAISIW-----SVDCMSNGDIIV-GSSDNLVRIFSQEK-SRWASED 303 (313)
T ss_dssp EEEEECTTTCCEEEEEECSSSCEE-----EEEECTTSCEEE-EETTSCEEEEESCG-GGCCC--
T ss_pred EEEEEECCCCceeEEEeccCceEE-----EEEEccCCCEEE-EeCCCcEEEEeCCC-Cceeehh
Confidence 589999999988777666554432 1222211 1222 44567899999874 5555443
No 127
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=27.91 E-value=4.1e+02 Score=25.49 Aligned_cols=115 Identities=10% Similarity=-0.010 Sum_probs=67.7
Q ss_pred ceeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEec
Q 009589 49 HSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSME 128 (531)
Q Consensus 49 ~~lRKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~ 128 (531)
.++-.++++|..+++.+.|. .|.||.... +.. .......+.+... +.-|..
T Consensus 94 ~~~~~~~~s~~~l~~~~~d~-~v~lw~~~~-------~~~------------------~~~~~~~~~~~v~---~v~~s~ 144 (401)
T 4aez_A 94 YYLNLLDWSNLNVVAVALER-NVYVWNADS-------GSV------------------SALAETDESTYVA---SVKWSH 144 (401)
T ss_dssp TTCBCEEECTTSEEEEEETT-EEEEEETTT-------CCE------------------EEEEECCTTCCEE---EEEECT
T ss_pred ceEEEEeecCCCEEEEECCC-eEEEeeCCC-------CcE------------------eEeeecCCCCCEE---EEEECC
Confidence 44666788888999988765 588887651 100 0111111122221 344667
Q ss_pred CceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeeecccE
Q 009589 129 GNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQT 208 (531)
Q Consensus 129 dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~Qt 208 (531)
||+++++|+.. -++.++|+++|...-+..-+.+.|. .+...+++|+.-|- --+
T Consensus 145 ~~~~l~~~~~d---------------------g~i~iwd~~~~~~~~~~~~~~~~v~-----~~~~~~~~l~~~~~-dg~ 197 (401)
T 4aez_A 145 DGSFLSVGLGN---------------------GLVDIYDVESQTKLRTMAGHQARVG-----CLSWNRHVLSSGSR-SGA 197 (401)
T ss_dssp TSSEEEEEETT---------------------SCEEEEETTTCCEEEEECCCSSCEE-----EEEEETTEEEEEET-TSE
T ss_pred CCCEEEEECCC---------------------CeEEEEECcCCeEEEEecCCCCceE-----EEEECCCEEEEEcC-CCC
Confidence 89988876543 1478899999987665543333332 23345666666654 478
Q ss_pred EEEEEEccCCe
Q 009589 209 IHILQVRDLGN 219 (531)
Q Consensus 209 Ihi~qI~~~G~ 219 (531)
|+++.+...+.
T Consensus 198 i~i~d~~~~~~ 208 (401)
T 4aez_A 198 IHHHDVRIANH 208 (401)
T ss_dssp EEEEETTSSSC
T ss_pred EEEEecccCcc
Confidence 88888874343
No 128
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=27.89 E-value=35 Score=33.59 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=20.4
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCC
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMWLS 80 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g~~ 80 (531)
.|+|||++|++=|.| .+.++|-.|.+
T Consensus 366 afspdG~~LA~as~~--Gv~lvrL~gf~ 391 (393)
T 4gq1_A 366 CWHQDGSHLAIATEG--SVLLTRLMGFT 391 (393)
T ss_dssp EECTTSSEEEEEESS--EEEEEEEGGGC
T ss_pred EEcCCCCEEEEEeCC--CeEEEEEeCcc
Confidence 699999999877654 57888888654
No 129
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=27.44 E-value=3.7e+02 Score=24.80 Aligned_cols=104 Identities=13% Similarity=0.177 Sum_probs=57.2
Q ss_pred eeeeCC--CCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEec
Q 009589 51 FRKFTD--DGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSME 128 (531)
Q Consensus 51 lRKFTp--DG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~ 128 (531)
.-.|+| ||++|++-|.|. .|.||.... +.+ ..++. .+.+. + -+..|.+
T Consensus 189 ~~~~~~~~~~~~l~s~s~D~-~i~iWd~~~-------~~~------------------~~~~~-~h~~~-v--~~~~~~p 238 (304)
T 2ynn_A 189 YVDYYPLPDKPYMITASDDL-TIKIWDYQT-------KSC------------------VATLE-GHMSN-V--SFAVFHP 238 (304)
T ss_dssp EEEECCSTTCCEEEEEETTS-EEEEEETTT-------TEE------------------EEEEE-CCSSC-E--EEEEECS
T ss_pred EEEEEEcCCCCEEEEEcCCC-eEEEEeCCC-------Ccc------------------ceeeC-CCCCC-E--EEEEECC
Confidence 345554 888998888775 688888751 111 00110 01111 1 1355778
Q ss_pred CceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEE-ee-ecce-----eeeecceeee
Q 009589 129 GNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFIN-LA-HNMG-----VFLYDDLLAI 201 (531)
Q Consensus 129 dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~-Ls-HN~G-----v~L~~dlLaI 201 (531)
+|++++-|+. |=++.|+|+.+|.+..+.....+.|+ ++ |..| +.=++|-+.|
T Consensus 239 ~~~~l~s~s~---------------------Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~ 297 (304)
T 2ynn_A 239 TLPIIISGSE---------------------DGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTV 297 (304)
T ss_dssp SSSEEEEEET---------------------TSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEE
T ss_pred CCCEEEEEcC---------------------CCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEE
Confidence 8886554322 22488999999998877766655553 33 3322 2224555555
Q ss_pred eeec
Q 009589 202 VSLR 205 (531)
Q Consensus 202 LS~q 205 (531)
+++.
T Consensus 298 ~~~~ 301 (304)
T 2ynn_A 298 LSLG 301 (304)
T ss_dssp EECC
T ss_pred EEec
Confidence 5554
No 130
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=26.65 E-value=4.5e+02 Score=25.49 Aligned_cols=29 Identities=17% Similarity=0.183 Sum_probs=21.7
Q ss_pred CceeeeeCCCCCeEEEeeCCCceEEEEeec
Q 009589 48 DHSFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 48 ~~~lRKFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
....-+++|+|++|++-+.|. .+.|+...
T Consensus 232 ~~~~~~~~~~g~~l~s~~~D~-~v~i~~~~ 260 (420)
T 4gga_A 232 EVCGLRWAPDGRHLASGGNDN-LVNVWPSA 260 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTS-CEEEEESS
T ss_pred ceeeeeecCCCCeeeeeeccc-cceEEeec
Confidence 345668999999999988875 45666654
No 131
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=26.33 E-value=4e+02 Score=24.88 Aligned_cols=80 Identities=13% Similarity=0.030 Sum_probs=43.3
Q ss_pred EEEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeec--cceEEe---eeccee---ee
Q 009589 123 FFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFH--NDFINL---AHNMGV---FL 194 (531)
Q Consensus 123 fsLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~--~D~I~L---sHN~Gv---~L 194 (531)
+.-|..+|+++++++... ..-++.++|+.+|...-...-. .+...+ +|+..| ..
T Consensus 238 ~i~~~~~~~~l~~~~~d~------------------~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSN------------------SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp EEEECSSTTEEEEEEEET------------------TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE
T ss_pred eEEECCCCCEEEEEecCC------------------CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEE
Confidence 344567888887764320 0146899999999766544320 000000 033222 22
Q ss_pred e--cceeeeeeecccEEEEEEEccCCeEEE
Q 009589 195 Y--DDLLAIVSLRYQTIHILQVRDLGNLVD 222 (531)
Q Consensus 195 ~--~dlLaILS~q~QtIhi~qI~~~G~fv~ 222 (531)
. +.+||.-+ .--+|+|+.+.. |+.+.
T Consensus 300 ~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~ 327 (397)
T 1sq9_A 300 NDSGETLCSAG-WDGKLRFWDVKT-KERIT 327 (397)
T ss_dssp CSSSSEEEEEE-TTSEEEEEETTT-TEEEE
T ss_pred CCCCCEEEEEe-CCCeEEEEEcCC-CceeE
Confidence 2 45666665 457899999874 65443
No 132
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=25.87 E-value=4.6e+02 Score=25.39 Aligned_cols=110 Identities=20% Similarity=0.258 Sum_probs=65.5
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhhhhheeeEEEccCCCeeeeeeEEEEecC
Q 009589 50 SFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEG 129 (531)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~fF~~~~~~~l~~~~e~L~refsLft~d 129 (531)
.+..++|||++|++-+.|. .|.||.... +.+ ..++. .+.+.. -+..|..+
T Consensus 272 ~v~~~~~~~~~l~~~~~d~-~i~vwd~~~-------~~~------------------~~~~~-~~~~~v---~~~~~~~~ 321 (464)
T 3v7d_B 272 SVRTVSGHGNIVVSGSYDN-TLIVWDVAQ-------MKC------------------LYILS-GHTDRI---YSTIYDHE 321 (464)
T ss_dssp CEEEEEEETTEEEEEETTS-CEEEEETTT-------TEE------------------EEEEC-CCSSCE---EEEEEETT
T ss_pred eEEEEcCCCCEEEEEeCCC-eEEEEECCC-------CcE------------------EEEec-CCCCCE---EEEEEcCC
Confidence 3556789999998888776 477877641 100 00110 011111 13446778
Q ss_pred ceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeeeccceEEeeecceeeeecceeeeeeecccEE
Q 009589 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTI 209 (531)
Q Consensus 130 gryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~dlLaILS~q~QtI 209 (531)
|++++.|+.. =+++++|+.+|...-+..-+.+.|. .+.+-++.|+.-|-- .+|
T Consensus 322 ~~~l~sg~~d---------------------g~i~vwd~~~~~~~~~~~~h~~~v~-----~~~~~~~~l~s~s~d-g~v 374 (464)
T 3v7d_B 322 RKRCISASMD---------------------TTIRIWDLENGELMYTLQGHTALVG-----LLRLSDKFLVSAAAD-GSI 374 (464)
T ss_dssp TTEEEEEETT---------------------SCEEEEETTTTEEEEEECCCSSCEE-----EEEECSSEEEEEETT-SEE
T ss_pred CCEEEEEeCC---------------------CcEEEEECCCCcEEEEEeCCCCcEE-----EEEEcCCEEEEEeCC-CcE
Confidence 8887765433 2488999999987766544444332 233446676666654 679
Q ss_pred EEEEEcc
Q 009589 210 HILQVRD 216 (531)
Q Consensus 210 hi~qI~~ 216 (531)
+|+.+..
T Consensus 375 ~vwd~~~ 381 (464)
T 3v7d_B 375 RGWDAND 381 (464)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 9999874
No 133
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=25.72 E-value=42 Score=31.74 Aligned_cols=28 Identities=11% Similarity=-0.224 Sum_probs=21.7
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeecC
Q 009589 50 SFRKFTDDGQYLISFSRNHQDLIVYRPMW 78 (531)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~~L~vYry~g 78 (531)
.-=.|+|||++|++-+.| ..|.||...|
T Consensus 398 ~~~~~s~~~~~l~~~~~d-g~i~iw~~~g 425 (425)
T 1r5m_A 398 FDLSWNCAGNKISVAYSL-QEGSVVAIPG 425 (425)
T ss_dssp EEEEECTTSSEEEEEESS-SCCEEEECCC
T ss_pred EEEEccCCCceEEEEecC-ceEEEEeecC
Confidence 344699999999887766 4688998765
No 134
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=25.23 E-value=4.1e+02 Score=24.60 Aligned_cols=154 Identities=10% Similarity=0.109 Sum_probs=0.0
Q ss_pred eCCCCCeEEEeeCCCceEEEEeecCCCCCcccccccCCCCCcccchhhh----hh----------------------hee
Q 009589 54 FTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFES----FF----------------------TQL 107 (531)
Q Consensus 54 FTpDG~yLIaFS~dq~~L~vYry~g~~~~~~~~~~~~~~~~~r~~~F~~----fF----------------------~~~ 107 (531)
++|||+ |++.+.....|.+|...|--..............+.+-.++. +| ...
T Consensus 93 ~d~dG~-l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v 171 (305)
T 3dr2_A 93 VDAQQR-LVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSV 171 (305)
T ss_dssp ECTTSC-EEEEETTTTEEEEECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEE
T ss_pred ECCCCC-EEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeE
Q ss_pred eEEEccCCC-eeeeeeE-----EEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeeeee--
Q 009589 108 YSVTLASCN-ELICKDF-----FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVF-- 179 (531)
Q Consensus 108 ~~~~l~~~~-e~L~ref-----sLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~~f-- 179 (531)
|.+....+. ..+. ++ ..|..||+.+.++... ...-.+-.++.+|+..+.+...+.|
T Consensus 172 ~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~---------------~~~~~~~~i~~~~~~~~~l~~~~~~~~ 235 (305)
T 3dr2_A 172 YRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTP---------------EQGHGSVEITAFAWRDGALHDRRHFAS 235 (305)
T ss_dssp EEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECC---------------C---CCCEEEEEEEETTEEEEEEEEEC
T ss_pred EEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecC---------------CcCCCCCEEEEEEecCCCccCCeEEEE
Q ss_pred ------------ccceEEeeecceeeee---cceeeeeeecccEEEEEEEccCCeEEEeee
Q 009589 180 ------------HNDFINLAHNMGVFLY---DDLLAIVSLRYQTIHILQVRDLGNLVDVRT 225 (531)
Q Consensus 180 ------------~~D~I~LsHN~Gv~L~---~dlLaILS~q~QtIhi~qI~~~G~fv~vrt 225 (531)
+...|+++.+.||+++ +.++..+.+.. .+.=....++|+-+-+-+
T Consensus 236 ~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 236 VPDGLPDGFCVDRGGWLWSSSGTGVCVFDSDGQLLGHIPTPG-TASNCTFDQAQQRLFITG 295 (305)
T ss_dssp CSSSCCCSEEECTTSCEEECCSSEEEEECTTSCEEEEEECSS-CCCEEEECTTSCEEEEEE
T ss_pred CCCCCCCeEEECCCCCEEEecCCcEEEECCCCCEEEEEECCC-ceeEEEEeCCCCEEEEEc
No 135
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=25.13 E-value=2.1e+02 Score=30.84 Aligned_cols=35 Identities=11% Similarity=0.187 Sum_probs=26.2
Q ss_pred EEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEee
Q 009589 125 LSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLD 175 (531)
Q Consensus 125 Lft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D 175 (531)
-+..||+++.+++... + -|.++++++|+++|....
T Consensus 169 ~~SPDG~~la~~~~~~--G--------------~e~~~i~v~dl~tg~~~~ 203 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDG--G--------------SDWRTVKFVGVADGKPLA 203 (741)
T ss_dssp EECTTSSEEEEEEEET--T--------------CSEEEEEEEETTTCCEEE
T ss_pred EECCCCCEEEEEEcCC--C--------------CceEEEEEEECCCCCCCC
Confidence 4568999999876541 1 146899999999998654
No 136
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=24.81 E-value=42 Score=33.93 Aligned_cols=24 Identities=25% Similarity=0.403 Sum_probs=19.8
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~ 77 (531)
.|||||++|++-|.|. .|.||.+.
T Consensus 515 ~~s~dg~~l~s~~~dg-~v~lwd~~ 538 (577)
T 2ymu_A 515 AFSPDGQTIASASDDK-TVKLWNRN 538 (577)
T ss_dssp EECTTSSCEEEEETTS-EEEEECTT
T ss_pred EEcCCCCEEEEEECcC-EEEEEeCC
Confidence 5999999999888775 68888754
No 137
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=24.40 E-value=1.8e+02 Score=31.95 Aligned_cols=119 Identities=14% Similarity=0.003 Sum_probs=70.6
Q ss_pred chhhhhhheeeEEEccCCCeeeeeeEEEEecCceEEEEEeecccCCCCCCCCCCCCCCCCcceEEEEEEEccCCeEeeee
Q 009589 98 KRFESFFTQLYSVTLASCNELICKDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEK 177 (531)
Q Consensus 98 ~~F~~fF~~~~~~~l~~~~e~L~refsLft~dgryvivas~~~~~~~~~~~n~av~~~p~le~ytfhlVdL~~G~v~D~~ 177 (531)
..++..-+..+.+.+..+-...+-||-. +++|..+|++..... ...++. ....+++ .|.-|| .+|.|+.+-
T Consensus 229 ~elD~~Gkvv~~~~lp~g~~~~HHD~~~-l~nGn~Lv~v~~~d~----~~~dG~--~~~~vdD-~I~EVD-~tGeVv~eW 299 (571)
T 3elq_A 229 YEFDMMGQVLEDHKLPRGFADATHESIE-TPNGTVLLRVGKSNY----RRDDGV--HVTTIRD-HILEVD-KSGRVVDVW 299 (571)
T ss_dssp EEECTTCCEEEEEECCTTEECBCSCEEE-CTTSCEEEEEEETTE----ECTTSC--EECCCSC-EEEEEC-TTSCEEEEE
T ss_pred EEECCCCcEEEEEECCCCccccccceEE-cCCCcEEEEEecccc----cCCCCc--ccceecc-EEEEEC-CCCCEEEEE
Confidence 4566666667777776554556777654 899999988643211 111221 1123566 488999 999988765
Q ss_pred eeccc----------------------------------------------eEEeeecceeeeec-ceeeeeeecccEEE
Q 009589 178 VFHND----------------------------------------------FINLAHNMGVFLYD-DLLAIVSLRYQTIH 210 (531)
Q Consensus 178 ~f~~D----------------------------------------------~I~LsHN~Gv~L~~-dlLaILS~q~QtIh 210 (531)
.+..- --.+.|...|..-. |=-.|+|.|||+
T Consensus 300 ~~~dhld~~~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~g~~~g~~~~~Dw~HiNsv~~d~~dd~~liSsR~~~-- 377 (571)
T 3elq_A 300 DLTKILDPKRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQG-- 377 (571)
T ss_dssp EHHHHSCTTCCTTGGGSBTTC-------CCCSCBCCCCTTCCSSSSSCSSTTSCSCCEEEEEEETTTTEEEEEETTTE--
T ss_pred EhHHccCcccccchhccccccccccccccccccccccccccccccccccCCCCCCcEecceeEcCCCCEEEEECCccE--
Confidence 53110 01334555665432 335688999995
Q ss_pred EEEEccCCeEEEeeeeCCc
Q 009589 211 ILQVRDLGNLVDVRTIGSF 229 (531)
Q Consensus 211 i~qI~~~G~fv~vrtIG~f 229 (531)
|+.|..+|+.+- .+|..
T Consensus 378 I~~Id~tG~V~W--~LGg~ 394 (571)
T 3elq_A 378 VVKIGRDKQVKW--ILAPS 394 (571)
T ss_dssp EEEEETTSCEEE--EESCS
T ss_pred EEEEcCCCcEEE--EECCC
Confidence 566755786433 45654
No 138
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=22.86 E-value=67 Score=29.63 Aligned_cols=27 Identities=7% Similarity=0.042 Sum_probs=22.0
Q ss_pred eeeeCCCCCeEEEeeCC---CceEEEEeec
Q 009589 51 FRKFTDDGQYLISFSRN---HQDLIVYRPM 77 (531)
Q Consensus 51 lRKFTpDG~yLIaFS~d---q~~L~vYry~ 77 (531)
==+|+|||.+|++.+.. ...|.||...
T Consensus 23 ~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~ 52 (357)
T 3i2n_A 23 DCKWVPCSAKFVTMGNFARGTGVIQLYEIQ 52 (357)
T ss_dssp EEEECTTSSEEEEEEC--CCCEEEEEEEEC
T ss_pred EEEEcCCCceEEEecCccCCCcEEEEEeCC
Confidence 34699999999988876 7889999887
No 139
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=22.74 E-value=94 Score=27.63 Aligned_cols=64 Identities=17% Similarity=0.273 Sum_probs=42.3
Q ss_pred CcceEEEEEEEccCCeEeeeeeeccceEEeeecc---eeeeecceeeeeee----------cccEEEEEEE-ccCCeEEE
Q 009589 157 FIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNM---GVFLYDDLLAIVSL----------RYQTIHILQV-RDLGNLVD 222 (531)
Q Consensus 157 ~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~---Gv~L~~dlLaILS~----------q~QtIhi~qI-~~~G~fv~ 222 (531)
.++.-|||.|+..||..||- .+..|- ++|+- |-...|.++-|.=- -..++++||| -++|.-+.
T Consensus 29 ~~~~~~~y~V~F~DgS~s~d-l~PedI--vs~dc~~~GpP~~G~~V~V~W~DG~~y~a~f~g~~~~~~YtV~FeDgs~~~ 105 (123)
T 2xdp_A 29 AVTSQTFYEVMFDDGSFSRD-TFPEDI--VSRDCLKLGPPAEGEVVQVKWPDGKLYGAKYFGSNIAHMYQVEFEDGSQIA 105 (123)
T ss_dssp EEEEEEEEEEEETTSCEEEE-ECGGGB--CSSCHHHHCCCCTTCEEEEECTTSCEEEEEEEEEEEEEEEEEECTTSCEEE
T ss_pred EEeeEEEEEEEcCCCCccCC-CCHhHc--ccccccccCCCCCCCEEEEEcCCCCEEeEEEeeeeeEEEEEEEECCCCeEE
Confidence 46788999999999999996 344442 23220 66666666666543 3357889999 36776444
Q ss_pred e
Q 009589 223 V 223 (531)
Q Consensus 223 v 223 (531)
+
T Consensus 106 ~ 106 (123)
T 2xdp_A 106 M 106 (123)
T ss_dssp E
T ss_pred e
Confidence 3
No 140
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=22.22 E-value=57 Score=32.97 Aligned_cols=25 Identities=24% Similarity=0.345 Sum_probs=20.6
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecC
Q 009589 53 KFTDDGQYLISFSRNHQDLIVYRPMW 78 (531)
Q Consensus 53 KFTpDG~yLIaFS~dq~~L~vYry~g 78 (531)
.|||||++|++-|.| ..|.||...|
T Consensus 64 ~fspdg~~las~~~d-~~i~vWd~~~ 88 (577)
T 2ymu_A 64 AFSPDGQTIASASDD-KTVKLWNRNG 88 (577)
T ss_dssp EECTTSSEEEEEETT-SCEEEEETTS
T ss_pred EECCCCCEEEEEeCC-CEEEEEECCC
Confidence 699999999998877 4688888654
No 141
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=21.80 E-value=4.2e+02 Score=23.51 Aligned_cols=58 Identities=21% Similarity=0.251 Sum_probs=32.5
Q ss_pred ceEEEEEEEccCCeEeeeeeeccceEEeeecceeeeecc-eeeeeeecccEEEEEEEccCCeEEEe
Q 009589 159 EKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDD-LLAIVSLRYQTIHILQVRDLGNLVDV 223 (531)
Q Consensus 159 e~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L~~d-lLaILS~q~QtIhi~qI~~~G~fv~v 223 (531)
++=+++++|+.+|...-+..-+.+.|. ++.+..| .|+.- -.--+|+|+.+.. |+.+..
T Consensus 203 ~dg~i~i~d~~~~~~~~~~~~~~~~i~-----~~~~~~~~~l~~~-~~dg~v~iwd~~~-~~~~~~ 261 (313)
T 3odt_A 203 NDGLIKLVDMHTGDVLRTYEGHESFVY-----CIKLLPNGDIVSC-GEDRTVRIWSKEN-GSLKQV 261 (313)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEE-----EEEECTTSCEEEE-ETTSEEEEECTTT-CCEEEE
T ss_pred CCCeEEEEECCchhhhhhhhcCCceEE-----EEEEecCCCEEEE-ecCCEEEEEECCC-CceeEE
Confidence 444789999999987655543333221 1222222 33333 3457888888764 665443
Done!