Query 009590
Match_columns 531
No_of_seqs 272 out of 1565
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 08:36:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009590.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009590hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.3 4.4E-12 1.5E-16 99.7 8.8 66 10-76 2-67 (68)
2 1cc8_A Protein (metallochapero 99.2 6.2E-11 2.1E-15 93.6 9.9 67 9-75 4-71 (73)
3 3dxs_X Copper-transporting ATP 99.2 7E-11 2.4E-15 93.2 9.3 67 9-75 1-71 (74)
4 4a4j_A Pacszia, cation-transpo 99.2 1.1E-10 3.8E-15 90.6 10.0 65 10-74 2-69 (69)
5 2crl_A Copper chaperone for su 99.1 2.2E-10 7.5E-15 97.3 9.7 72 7-78 16-87 (98)
6 3fry_A Probable copper-exporti 99.1 1.4E-10 4.9E-15 92.0 7.8 66 9-76 4-70 (73)
7 2xmw_A PACS-N, cation-transpor 99.0 2.7E-09 9.2E-14 81.5 10.1 65 10-74 3-70 (71)
8 2xmm_A SSR2857 protein, ATX1; 99.0 8.1E-10 2.8E-14 82.7 6.7 60 12-71 3-63 (64)
9 1osd_A MERP, hypothetical prot 99.0 2.7E-09 9.2E-14 81.9 9.7 66 9-74 2-71 (72)
10 2l3m_A Copper-ION-binding prot 99.0 3.1E-09 1.1E-13 81.5 9.9 63 9-71 4-70 (71)
11 1mwy_A ZNTA; open-faced beta-s 99.0 3.3E-09 1.1E-13 82.5 10.2 66 9-74 2-69 (73)
12 1aw0_A Menkes copper-transport 99.0 2.6E-09 8.7E-14 82.0 9.3 65 10-74 3-71 (72)
13 2roe_A Heavy metal binding pro 98.9 1.1E-09 3.7E-14 83.8 6.4 62 13-74 3-65 (66)
14 3cjk_B Copper-transporting ATP 98.9 5.1E-09 1.7E-13 81.5 10.2 66 10-75 2-71 (75)
15 1y3j_A Copper-transporting ATP 98.9 2.3E-09 7.7E-14 84.3 8.0 67 9-75 2-72 (77)
16 2k2p_A Uncharacterized protein 98.9 1.4E-09 4.8E-14 89.8 7.0 64 8-71 20-84 (85)
17 2qif_A Copper chaperone COPZ; 98.9 5.7E-09 1.9E-13 78.2 9.7 62 10-71 2-67 (69)
18 2g9o_A Copper-transporting ATP 98.9 5.2E-09 1.8E-13 86.5 9.3 69 10-78 3-78 (90)
19 1kvi_A Copper-transporting ATP 98.9 3.4E-09 1.2E-13 83.5 7.9 67 9-75 7-77 (79)
20 1q8l_A Copper-transporting ATP 98.9 3.9E-09 1.3E-13 85.2 8.2 69 8-76 7-79 (84)
21 1yjr_A Copper-transporting ATP 98.9 4.4E-09 1.5E-13 81.3 8.2 66 10-75 4-73 (75)
22 1opz_A Potential copper-transp 98.9 6.2E-09 2.1E-13 80.2 8.9 66 9-74 5-74 (76)
23 2kt2_A Mercuric reductase; nme 98.9 4E-09 1.4E-13 80.6 7.7 62 13-74 3-67 (69)
24 1fvq_A Copper-transporting ATP 98.9 6.8E-09 2.3E-13 79.6 8.9 65 11-75 3-70 (72)
25 1cpz_A Protein (COPZ); copper 98.9 6.1E-09 2.1E-13 78.8 8.5 61 13-73 3-67 (68)
26 1yg0_A COP associated protein; 98.9 6.7E-09 2.3E-13 78.1 7.7 61 11-71 2-65 (66)
27 1jww_A Potential copper-transp 98.9 9.5E-09 3.2E-13 80.6 8.9 67 10-76 3-73 (80)
28 2kkh_A Putative heavy metal tr 98.8 1.4E-08 4.9E-13 84.0 10.0 71 8-78 14-88 (95)
29 2kyz_A Heavy metal binding pro 98.8 5.1E-09 1.8E-13 80.5 6.3 60 12-73 3-63 (67)
30 2ldi_A Zinc-transporting ATPas 98.8 8.2E-09 2.8E-13 78.1 7.0 64 9-72 2-69 (71)
31 1qup_A Superoxide dismutase 1 98.8 1.1E-08 3.9E-13 99.8 9.4 70 10-79 6-75 (222)
32 2ofg_X Zinc-transporting ATPas 98.8 2.1E-08 7.1E-13 86.4 9.5 66 8-73 6-75 (111)
33 1p6t_A Potential copper-transp 98.7 2.6E-08 9E-13 88.0 8.7 68 10-77 74-145 (151)
34 2ew9_A Copper-transporting ATP 98.7 2.8E-08 9.5E-13 87.3 8.7 65 10-74 80-148 (149)
35 1jk9_B CCS, copper chaperone f 98.7 4.1E-08 1.4E-12 97.5 8.3 69 10-78 7-75 (249)
36 2rop_A Copper-transporting ATP 98.6 1E-07 3.5E-12 89.5 9.9 68 10-77 122-193 (202)
37 2aj0_A Probable cadmium-transp 98.6 4.8E-08 1.6E-12 75.6 6.2 59 11-73 4-63 (71)
38 2ew9_A Copper-transporting ATP 98.5 2E-07 6.7E-12 81.8 8.9 67 9-75 3-73 (149)
39 2rop_A Copper-transporting ATP 98.2 1.8E-06 6.3E-11 80.9 7.9 64 9-72 19-89 (202)
40 3j09_A COPA, copper-exporting 98.2 2.4E-06 8.1E-11 96.1 9.6 64 11-74 3-70 (723)
41 1p6t_A Potential copper-transp 98.2 5.8E-06 2E-10 72.8 8.8 63 9-71 5-71 (151)
42 3bpd_A Uncharacterized protein 75.2 8.5 0.00029 33.0 7.2 64 8-72 5-77 (100)
43 3lvj_C Sulfurtransferase TUSA; 74.1 9 0.00031 31.0 6.9 55 11-74 10-67 (82)
44 2x3d_A SSO6206; unknown functi 71.3 18 0.00063 30.8 8.2 65 8-73 3-77 (96)
45 3hz7_A Uncharacterized protein 70.4 12 0.0004 30.9 6.9 52 13-74 3-59 (87)
46 1jdq_A TM006 protein, hypothet 69.0 12 0.00042 31.5 6.8 54 12-74 27-83 (98)
47 3cq1_A Putative uncharacterize 66.0 5.5 0.00019 33.5 4.1 36 11-46 42-83 (103)
48 2raq_A Conserved protein MTH88 65.9 21 0.00071 30.6 7.5 64 9-73 6-78 (97)
49 2byk_A Chrac-16; nucleosome sl 64.1 1.4 4.9E-05 40.0 0.0 14 24-37 22-35 (140)
50 3iot_A Maltose-binding protein 62.0 1.5 5.2E-05 45.1 -0.2 11 22-32 42-52 (449)
51 1uwd_A Hypothetical protein TM 61.4 7.3 0.00025 32.7 4.0 36 11-46 43-84 (103)
52 1ayz_A UBC2, ubiquitin-conjuga 60.2 2 6.9E-05 39.8 0.3 11 23-33 5-15 (169)
53 2jsx_A Protein NAPD; TAT, proo 59.1 24 0.00083 29.6 6.8 47 21-67 16-63 (95)
54 1ff3_A Peptide methionine sulf 55.6 18 0.00063 34.9 6.1 27 21-47 49-75 (211)
55 1fvg_A Peptide methionine sulf 55.4 21 0.00071 34.2 6.4 28 21-48 50-77 (199)
56 4gwb_A Peptide methionine sulf 53.4 17 0.00059 33.9 5.4 46 21-66 9-72 (168)
57 3tj1_A RNA polymerase I-specif 52.3 3 0.0001 46.6 0.0 8 25-32 76-83 (649)
58 3lno_A Putative uncharacterize 50.3 8.6 0.00029 32.7 2.6 37 11-47 45-88 (108)
59 3bqh_A PILB, peptide methionin 49.2 26 0.0009 33.3 6.0 27 21-47 9-35 (193)
60 1je3_A EC005, hypothetical 8.6 47.5 15 0.0005 31.1 3.5 54 12-74 28-84 (97)
61 1owx_A Lupus LA protein, SS-B, 45.4 38 0.0013 29.7 6.0 56 12-67 19-76 (121)
62 1nwa_A Peptide methionine sulf 44.9 24 0.00084 33.8 5.0 46 21-66 32-95 (203)
63 1d7q_A Translation initiation 44.5 16 0.00053 33.4 3.5 6 46-51 43-48 (143)
64 2kmw_A Uncharacterized protein 42.5 24 0.00083 31.9 4.5 18 36-53 24-42 (150)
65 3erw_A Sporulation thiol-disul 42.4 59 0.002 26.5 6.7 55 12-72 37-97 (145)
66 1rm1_C Transcription initiatio 42.0 8.2 0.00028 38.8 1.3 7 63-69 45-51 (286)
67 2j89_A Methionine sulfoxide re 41.9 28 0.00097 34.6 5.1 27 21-47 101-127 (261)
68 1zzo_A RV1677; thioredoxin fol 41.5 80 0.0027 25.3 7.3 49 12-69 28-80 (136)
69 1lu4_A Soluble secreted antige 41.4 74 0.0025 25.7 7.1 53 12-73 27-83 (136)
70 3kcm_A Thioredoxin family prot 41.1 60 0.002 27.1 6.6 51 12-71 31-88 (154)
71 3e0m_A Peptide methionine sulf 39.9 41 0.0014 34.3 6.1 46 21-66 9-74 (313)
72 3hou_D DNA-directed RNA polyme 39.3 4 0.00014 39.6 -1.4 12 86-97 29-40 (221)
73 3us3_A Calsequestrin-1; calciu 37.4 7 0.00024 39.6 0.0 11 55-65 110-120 (367)
74 3iab_B Ribonucleases P/MRP pro 37.2 7.7 0.00026 35.3 0.2 7 51-57 35-41 (140)
75 3iab_B Ribonucleases P/MRP pro 36.1 6.9 0.00024 35.6 -0.3 9 24-32 45-53 (140)
76 3ha9_A Uncharacterized thiored 35.4 1.2E+02 0.004 25.8 7.7 58 12-69 40-110 (165)
77 3us3_A Calsequestrin-1; calciu 35.1 8.8 0.0003 38.8 0.3 16 55-70 213-228 (367)
78 1pav_A Hypothetical protein TA 34.6 14 0.00047 29.4 1.3 51 13-72 8-61 (78)
79 3ia1_A THIO-disulfide isomeras 33.3 95 0.0032 25.9 6.6 55 11-73 32-90 (154)
80 3gl3_A Putative thiol:disulfid 32.4 58 0.002 27.2 5.1 53 12-73 31-89 (152)
81 2dgo_A Cytotoxic granule-assoc 32.2 98 0.0034 25.1 6.4 57 10-67 14-77 (115)
82 3eur_A Uncharacterized protein 31.4 2.2E+02 0.0075 23.4 8.6 50 12-70 34-92 (142)
83 3ewl_A Uncharacterized conserv 30.5 1.6E+02 0.0056 24.0 7.6 51 12-72 30-90 (142)
84 1kng_A Thiol:disulfide interch 30.1 1.3E+02 0.0044 25.0 6.9 49 12-70 45-97 (156)
85 2b5x_A YKUV protein, TRXY; thi 29.9 1E+02 0.0034 25.2 6.1 56 12-71 32-92 (148)
86 2ytc_A PRE-mRNA-splicing facto 29.7 98 0.0033 23.5 5.6 55 12-67 13-68 (85)
87 2cq3_A RNA-binding protein 9; 28.9 1.5E+02 0.005 23.5 6.8 54 12-66 16-74 (103)
88 2cph_A RNA binding motif prote 28.0 1.3E+02 0.0043 24.0 6.2 55 12-67 16-78 (107)
89 1x4c_A Splicing factor, argini 26.9 1.4E+02 0.0048 24.1 6.4 55 12-68 16-71 (108)
90 3rdw_A Putative arsenate reduc 26.8 63 0.0022 27.7 4.3 47 17-71 12-59 (121)
91 4fo5_A Thioredoxin-like protei 25.3 2.4E+02 0.0083 23.2 7.8 50 12-70 35-90 (143)
92 2lxf_A Uncharacterized protein 24.3 1.5E+02 0.005 26.0 6.2 57 9-66 33-94 (121)
93 3fze_A Protein STE5; alpha/bet 24.1 22 0.00074 33.8 0.9 60 9-68 19-89 (196)
94 4euy_A Uncharacterized protein 23.9 2.4E+02 0.008 22.0 7.1 34 12-45 21-58 (105)
95 3hdc_A Thioredoxin family prot 22.7 71 0.0024 27.1 3.9 35 12-46 44-84 (158)
96 3ex7_B RNA-binding protein 8A; 22.6 1.9E+02 0.0066 23.7 6.6 54 12-66 23-83 (126)
97 3v4k_A DNA DC->DU-editing enzy 22.5 1.4E+02 0.0047 28.6 6.1 54 18-76 109-163 (203)
98 2f9s_A Thiol-disulfide oxidore 22.4 84 0.0029 26.2 4.3 50 12-70 29-84 (151)
99 1whx_A Hypothetical protein ri 22.3 2.4E+02 0.0081 23.0 7.0 55 11-66 10-65 (111)
100 2nyt_A Probable C->U-editing e 22.2 1.4E+02 0.0046 28.1 6.0 63 11-76 84-147 (190)
101 1whw_A Hypothetical protein ri 22.1 2.6E+02 0.0088 21.8 7.0 55 12-67 9-70 (99)
102 3trg_A Acylphosphatase; fatty 21.9 1.8E+02 0.0062 24.2 6.1 57 9-66 11-72 (98)
103 2dng_A Eukaryotic translation 21.7 2.2E+02 0.0074 22.5 6.5 53 10-64 14-73 (103)
104 1rk8_A CG8781-PA, CG8781-PA pr 21.7 19 0.00066 31.9 0.0 24 193-216 3-26 (165)
105 2cpj_A Non-POU domain-containi 21.6 1.1E+02 0.0039 24.1 4.7 53 13-66 17-70 (99)
106 2l5o_A Putative thioredoxin; s 21.5 1.8E+02 0.0063 24.0 6.3 53 12-72 31-89 (153)
107 2la4_A Nuclear and cytoplasmic 21.3 2.2E+02 0.0076 22.3 6.4 54 12-66 28-82 (101)
108 1sig_A Sigma70, RNA polymerase 20.8 30 0.001 34.7 1.2 28 186-213 74-101 (339)
109 3pim_A Peptide methionine sulf 20.7 64 0.0022 30.6 3.3 27 21-47 26-54 (187)
110 1why_A Hypothetical protein ri 20.6 1.8E+02 0.0063 22.7 5.8 53 13-66 19-72 (97)
111 3fkf_A Thiol-disulfide oxidore 20.5 3.1E+02 0.011 22.2 7.4 54 11-73 35-95 (148)
112 3or5_A Thiol:disulfide interch 20.4 2.1E+02 0.0073 23.8 6.5 51 12-71 37-93 (165)
113 2dnq_A RNA-binding protein 4B; 20.4 2.9E+02 0.01 21.1 6.9 52 12-66 9-61 (90)
114 2dnh_A Bruno-like 5, RNA bindi 20.4 1.9E+02 0.0065 22.9 5.9 54 12-66 16-75 (105)
115 3fz4_A Putative arsenate reduc 20.3 1.4E+02 0.0047 25.5 5.2 47 17-71 10-56 (120)
116 1x4a_A Splicing factor, argini 20.2 2.2E+02 0.0076 22.7 6.3 55 12-67 23-81 (109)
117 1h2v_Z 20 kDa nuclear CAP bind 20.1 2E+02 0.0069 24.7 6.4 55 12-67 40-101 (156)
118 2cpq_A FragIle X mental retard 20.0 2.6E+02 0.0087 23.3 6.6 43 26-69 35-77 (91)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.32 E-value=4.4e-12 Score=99.65 Aligned_cols=66 Identities=29% Similarity=0.537 Sum_probs=61.9
Q ss_pred eEEEEEEccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEEcCc
Q 009590 10 QTYVLKVNIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAELWGA 76 (531)
Q Consensus 10 ~kv~LkVgM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l~~~ 76 (531)
.+++|+|+|+|.+|+.+|+++|++++|| ++++|+...+++|+..+++++|+++|+++||.+++|+.
T Consensus 2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 4667888999999999999999999999 99999999999999889999999999999999998864
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.21 E-value=6.2e-11 Score=93.63 Aligned_cols=67 Identities=28% Similarity=0.488 Sum_probs=62.1
Q ss_pred ceEEEEEEccccHHHHHHHHHHHhCCC-CeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEEcC
Q 009590 9 IQTYVLKVNIHCDGCKHKVKKILQKID-GVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAELWG 75 (531)
Q Consensus 9 ~~kv~LkVgM~C~~Ca~KVEKaL~ki~-GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l~~ 75 (531)
+.+++|+|.|+|.+|+.+|+++|++++ ||.+++||+...+++|+..+++++|+++|+++||++++|.
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 456778889999999999999999999 9999999999999999988899999999999999988765
No 3
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.19 E-value=7e-11 Score=93.16 Aligned_cols=67 Identities=22% Similarity=0.445 Sum_probs=61.1
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEcC
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELWG 75 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~~ 75 (531)
|++++|+| +|+|.+|+.+|+++|++++||..++|++...+++|+.+ +++++|+++|+++||.+++++
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 45678999 89999999999999999999999999999999999853 689999999999999998765
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.18 E-value=1.1e-10 Score=90.60 Aligned_cols=65 Identities=25% Similarity=0.555 Sum_probs=59.6
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEE--ecCCHHHHHHHHHHcCCceEEc
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVS--GNVDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~--g~v~pd~Ii~aI~kaGy~A~l~ 74 (531)
++++|+| +|+|.+|+.+|+++|++++||..++|++...+++|+ ..+++++|+++|+++||+++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence 4678999 799999999999999999999999999999999998 4578999999999999998753
No 5
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=2.2e-10 Score=97.28 Aligned_cols=72 Identities=25% Similarity=0.362 Sum_probs=65.0
Q ss_pred ccceEEEEEEccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEEcCccc
Q 009590 7 MKIQTYVLKVNIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAELWGAQK 78 (531)
Q Consensus 7 ~~~~kv~LkVgM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l~~~~~ 78 (531)
+.+.+++|+|.|+|..|+.+|+++|.++++|..++|++...+++|+..+++++|+++|+++||++++|....
T Consensus 16 ~~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 87 (98)
T 2crl_A 16 GTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGS 87 (98)
T ss_dssp CCCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCC
T ss_pred ccceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCC
Confidence 345667888899999999999999999999999999999999999988899999999999999998876543
No 6
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.11 E-value=1.4e-10 Score=92.03 Aligned_cols=66 Identities=26% Similarity=0.463 Sum_probs=61.3
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEEcCc
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAELWGA 76 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l~~~ 76 (531)
+.+++|+| +|+|.+|+.+|+++|++ +||..++|++...+++|+.+ +++.|+++|+++||.++++..
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence 56788999 79999999999999999 99999999999999999988 899999999999999987763
No 7
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.99 E-value=2.7e-09 Score=81.45 Aligned_cols=65 Identities=23% Similarity=0.502 Sum_probs=57.2
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec--CCHHHHHHHHHHcCCceEEc
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN--VDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~--v~pd~Ii~aI~kaGy~A~l~ 74 (531)
.+++|+| +|+|..|+.+|+++|.+++||..+++++...+++|+.+ ++++.|+++|+++||.+.++
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~ 70 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 70 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence 4567899 79999999999999999999999999999999999853 67888999999999987643
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.98 E-value=8.1e-10 Score=82.73 Aligned_cols=60 Identities=28% Similarity=0.438 Sum_probs=56.0
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCce
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHA 71 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A 71 (531)
++|+| +|+|.+|+.+|+++|.+++||..+++++...+++|+..++++.|+++|+++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 46889 7999999999999999999999999999999999987788899999999999975
No 9
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.98 E-value=2.7e-09 Score=81.88 Aligned_cols=66 Identities=27% Similarity=0.401 Sum_probs=58.5
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEc
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~ 74 (531)
..+++|+| +|+|..|+.+|+++|.+++||..+++++...+++|+.+ ++++.|+++|+++||.+++.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence 35678999 79999999999999999999999999999999999753 57889999999999987653
No 10
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.97 E-value=3.1e-09 Score=81.47 Aligned_cols=63 Identities=17% Similarity=0.433 Sum_probs=57.0
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCce
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHA 71 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A 71 (531)
+.+++|+| +|+|..|+.+|+++|.+++||..+++++...+++|+.+ ++++.|+++|+++||.+
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 46678999 79999999999999999999999999999999999743 67889999999999975
No 11
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.97 E-value=3.3e-09 Score=82.52 Aligned_cols=66 Identities=21% Similarity=0.299 Sum_probs=57.9
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecC-CHHHHHHHHHHcCCceEEc
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNV-DPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v-~pd~Ii~aI~kaGy~A~l~ 74 (531)
+.+++|+| +|+|..|+.+|+++|.+++||..++|++...+++|+.+. ..+.|+++|+++||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE 69 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence 45678999 799999999999999999999999999999999998642 3678899999999987654
No 12
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.97 E-value=2.6e-09 Score=82.01 Aligned_cols=65 Identities=22% Similarity=0.397 Sum_probs=58.1
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEc
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~ 74 (531)
.+++|+| +|+|..|+.+|+++|.++++|..+++++...+++|+.+ ++.+.|+++|+++||.+.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 4567999 89999999999999999999999999999999999854 57889999999999987653
No 13
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.94 E-value=1.1e-09 Score=83.85 Aligned_cols=62 Identities=34% Similarity=0.621 Sum_probs=56.4
Q ss_pred EEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEEc
Q 009590 13 VLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 13 ~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l~ 74 (531)
+|+| +|+|.+|+.+|+++|.+++||..+++++...+++|...++++.|+++|+++||.+..+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 5788 7999999999999999999999999999999999965578899999999999987653
No 14
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.94 E-value=5.1e-09 Score=81.50 Aligned_cols=66 Identities=18% Similarity=0.417 Sum_probs=58.7
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEcC
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELWG 75 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~~ 75 (531)
.+++|+| +|+|..|+.+|+++|.++++|..+++++...+++|+.+ ++++.|+++|+++||.+.++.
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 3567899 79999999999999999999999999999999999853 578899999999999887654
No 15
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.93 E-value=2.3e-09 Score=84.34 Aligned_cols=67 Identities=18% Similarity=0.420 Sum_probs=59.9
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEcC
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELWG 75 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~~ 75 (531)
|.+++|+| +|+|..|+.+|+++|.++++|..+++++...+++|+.+ ++++.|+++|+++||.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 45678999 79999999999999999999999999999999999853 577899999999999987654
No 16
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.93 E-value=1.4e-09 Score=89.82 Aligned_cols=64 Identities=17% Similarity=0.278 Sum_probs=58.2
Q ss_pred cceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCce
Q 009590 8 KIQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHA 71 (531)
Q Consensus 8 ~~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A 71 (531)
.+.+++|+| +|+|..|+.+|+++|.++++|..++|++...+++|+..+++++|+++|+++||.+
T Consensus 20 ~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 20 QGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp --CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred cccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 355678999 7999999999999999999999999999999999998789999999999999975
No 17
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.93 E-value=5.7e-09 Score=78.15 Aligned_cols=62 Identities=26% Similarity=0.455 Sum_probs=55.7
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCce
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHA 71 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A 71 (531)
.+++|+| +|+|..|+.+|+++|..+++|..+++++...+++|+.+ ++++.|+++|+++||.+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 4567899 79999999999999999999999999999999999753 57889999999999975
No 18
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.90 E-value=5.2e-09 Score=86.50 Aligned_cols=69 Identities=17% Similarity=0.275 Sum_probs=60.0
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEe---cCCHHHHHHHHHHc---CCceEEcCccc
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSG---NVDPSVLIKKLAKS---GKHAELWGAQK 78 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g---~v~pd~Ii~aI~ka---Gy~A~l~~~~~ 78 (531)
.+++|+| +|+|..|+.+|+++|.++++|..++|++...+++|+. .++++.|+++|+++ ||++.++....
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~~ 78 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEVE 78 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC-
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCCc
Confidence 3567899 8999999999999999999999999999999999985 35788999999999 59888776543
No 19
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.90 E-value=3.4e-09 Score=83.49 Aligned_cols=67 Identities=18% Similarity=0.427 Sum_probs=59.7
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEcC
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELWG 75 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~~ 75 (531)
..+++|+| +|+|..|+.+|+++|.++++|..+++++...+++|+.+ ++.+.|+++|+++||.+.+..
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 45678999 79999999999999999999999999999999999853 577899999999999887654
No 20
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.89 E-value=3.9e-09 Score=85.19 Aligned_cols=69 Identities=16% Similarity=0.272 Sum_probs=61.0
Q ss_pred cceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEcCc
Q 009590 8 KIQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELWGA 76 (531)
Q Consensus 8 ~~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~~~ 76 (531)
...+++|+| +|+|..|+.+|+++|.+++||..+++++...+++|+.+ ++++.|+++|+++||.+.++..
T Consensus 7 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 79 (84)
T 1q8l_A 7 GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ 79 (84)
T ss_dssp SCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred CceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCC
Confidence 345678999 79999999999999999999999999999999999853 5788999999999999876553
No 21
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.89 E-value=4.4e-09 Score=81.32 Aligned_cols=66 Identities=23% Similarity=0.409 Sum_probs=57.6
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEcC
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELWG 75 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~~ 75 (531)
.+++|+| +|+|..|+.+|+++|.+++||..+++++...+++|+.+ ++++.|+++|+++||.+.+..
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLVK 73 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEESS
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceeec
Confidence 3467899 89999999999999999999999999999999999854 456789999999999876543
No 22
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.89 E-value=6.2e-09 Score=80.23 Aligned_cols=66 Identities=20% Similarity=0.400 Sum_probs=58.7
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEe---cCCHHHHHHHHHHcCCceEEc
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSG---NVDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g---~v~pd~Ii~aI~kaGy~A~l~ 74 (531)
+.+++|+| +|+|..|+.+|+++|.++++|..+++++...+++|+. .++++.|+.+|+++||.+.++
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 45678999 7999999999999999999999999999999999975 357889999999999987654
No 23
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.89 E-value=4e-09 Score=80.63 Aligned_cols=62 Identities=29% Similarity=0.484 Sum_probs=55.8
Q ss_pred EEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec--CCHHHHHHHHHHcCCceEEc
Q 009590 13 VLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN--VDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 13 ~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~--v~pd~Ii~aI~kaGy~A~l~ 74 (531)
+|+| +|+|..|+.+|+++|.++++|..+++++...+++|+.+ +++++|+++|+++||.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence 4788 79999999999999999999999999999999999753 57889999999999987643
No 24
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.89 E-value=6.8e-09 Score=79.60 Aligned_cols=65 Identities=18% Similarity=0.390 Sum_probs=58.3
Q ss_pred EEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec--CCHHHHHHHHHHcCCceEEcC
Q 009590 11 TYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN--VDPSVLIKKLAKSGKHAELWG 75 (531)
Q Consensus 11 kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~--v~pd~Ii~aI~kaGy~A~l~~ 75 (531)
+++|+| +|+|..|+.+|+++|.+++||..+++++...+++|+.+ ++.+.|+++|+++||.+.++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 457899 79999999999999999999999999999999999853 677899999999999987663
No 25
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.88 E-value=6.1e-09 Score=78.77 Aligned_cols=61 Identities=20% Similarity=0.436 Sum_probs=55.7
Q ss_pred EEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEE
Q 009590 13 VLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAEL 73 (531)
Q Consensus 13 ~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l 73 (531)
+|+| +|+|..|+.+|+++|.++++|..+++++...+++|+.+ +++++|+++|+++||++++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 5888 79999999999999999999999999999999999853 5788999999999998765
No 26
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.85 E-value=6.7e-09 Score=78.11 Aligned_cols=61 Identities=23% Similarity=0.463 Sum_probs=54.7
Q ss_pred EEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec--CCHHHHHHHHHHcCCce
Q 009590 11 TYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN--VDPSVLIKKLAKSGKHA 71 (531)
Q Consensus 11 kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~--v~pd~Ii~aI~kaGy~A 71 (531)
+++|+| +|+|..|+.+|+++|.+++||..+++++...+++|+.+ ++++.|+++|+++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 346888 79999999999999999999999999999999999853 47788999999999975
No 27
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.85 E-value=9.5e-09 Score=80.56 Aligned_cols=67 Identities=27% Similarity=0.432 Sum_probs=59.4
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEcCc
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELWGA 76 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~~~ 76 (531)
.+++|+| +|+|..|+.+|+++|.++++|..+++++...+++|+.+ ++++.|+.+|+++||.+.++..
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~ 73 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 73 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCS
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCc
Confidence 4567999 79999999999999999999999999999999999753 5788899999999999877653
No 28
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.84 E-value=1.4e-08 Score=84.05 Aligned_cols=71 Identities=24% Similarity=0.312 Sum_probs=62.3
Q ss_pred cceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEcCccc
Q 009590 8 KIQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELWGAQK 78 (531)
Q Consensus 8 ~~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~~~~~ 78 (531)
.+.+++|+| +|+|..|+.+|+++|..+++|..++|++...+++|+.+ ++++.|+.+|+++||.+.++....
T Consensus 14 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 88 (95)
T 2kkh_A 14 KLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNGE 88 (95)
T ss_dssp CSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCCC
T ss_pred ceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCCC
Confidence 456778999 79999999999999999999999999999999999853 578899999999999987765543
No 29
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.82 E-value=5.1e-09 Score=80.46 Aligned_cols=60 Identities=33% Similarity=0.527 Sum_probs=54.2
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEE
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAEL 73 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l 73 (531)
++|+| +|+|.+|+.+|+++|.++ +|..+++++...+++|+.+.. +.|+++|+++||.+.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~ 63 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVES 63 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCB
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceee
Confidence 46889 899999999999999999 999999999999999986545 8899999999998654
No 30
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.81 E-value=8.2e-09 Score=78.12 Aligned_cols=64 Identities=22% Similarity=0.504 Sum_probs=56.7
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceE
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAE 72 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~ 72 (531)
+.+++|+| +|+|..|+.+|+++|.++++|..+++++...+++|+.+ ++++.|+++|+++||.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 34567999 79999999999999999999999999999999999753 577889999999999764
No 31
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.80 E-value=1.1e-08 Score=99.79 Aligned_cols=70 Identities=30% Similarity=0.554 Sum_probs=63.4
Q ss_pred eEEEEEEccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEEcCcccc
Q 009590 10 QTYVLKVNIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAELWGAQKA 79 (531)
Q Consensus 10 ~kv~LkVgM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l~~~~~~ 79 (531)
.+++|+|.|+|.+|+.+||++|+++++|.+++|++...+++|+..+++++|+++|+++||+++++.....
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence 4567888899999999999999999999999999999999999888999999999999999988765543
No 32
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.78 E-value=2.1e-08 Score=86.36 Aligned_cols=66 Identities=24% Similarity=0.473 Sum_probs=59.0
Q ss_pred cceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEE
Q 009590 8 KIQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAEL 73 (531)
Q Consensus 8 ~~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l 73 (531)
.+.+++|+| +|+|..|+.+|+++|+++++|..++|++...+++|+.+ ++++.|+++|+++||.+..
T Consensus 6 ~~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (111)
T 2ofg_X 6 PLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAE 75 (111)
T ss_dssp CCEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC
T ss_pred cceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeee
Confidence 356788999 79999999999999999999999999999999999853 5778999999999998754
No 33
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.73 E-value=2.6e-08 Score=88.03 Aligned_cols=68 Identities=28% Similarity=0.439 Sum_probs=61.0
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEcCcc
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELWGAQ 77 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~~~~ 77 (531)
.+++|+| +|+|..|+++|+++|.+++||..++|++...+++|+.+ +++++|+++|+++||.+.++...
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 145 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ 145 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCcc
Confidence 4578999 79999999999999999999999999999999999853 68899999999999998876543
No 34
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.73 E-value=2.8e-08 Score=87.31 Aligned_cols=65 Identities=25% Similarity=0.450 Sum_probs=58.6
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEc
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~ 74 (531)
.+++|+| +|+|.+|+.+|+++|++++||..++|++...+++|+.+ +++++|+++|+++||.+.++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence 4578999 89999999999999999999999999999999999853 67899999999999987643
No 35
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.65 E-value=4.1e-08 Score=97.54 Aligned_cols=69 Identities=30% Similarity=0.561 Sum_probs=62.1
Q ss_pred eEEEEEEccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEEcCccc
Q 009590 10 QTYVLKVNIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAELWGAQK 78 (531)
Q Consensus 10 ~kv~LkVgM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l~~~~~ 78 (531)
.+++|+|.|+|.+|+.+||++|+++++|.+++|++...+++|+..+++++|+++|+++||.++++....
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~ 75 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGK 75 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESS
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCc
Confidence 346788889999999999999999999999999999999999988899999999999999988765443
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.63 E-value=1e-07 Score=89.55 Aligned_cols=68 Identities=22% Similarity=0.466 Sum_probs=59.4
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEcCcc
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELWGAQ 77 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~~~~ 77 (531)
.+++|+| +|+|..|+.+|+++|.+++||..++|++...+++|+.+ +++++|+++|+++||.+.++...
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 193 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSES 193 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC---
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCCC
Confidence 4578999 79999999999999999999999999999999999853 57899999999999998876643
No 37
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.62 E-value=4.8e-08 Score=75.62 Aligned_cols=59 Identities=25% Similarity=0.569 Sum_probs=50.9
Q ss_pred EEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEE
Q 009590 11 TYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAEL 73 (531)
Q Consensus 11 kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l 73 (531)
+++|+| +|+|..|+.+|+++|.++++|..++|++...+++|+...+ +..|+++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHL 63 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTC
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCccc
Confidence 567899 7999999999999999999999999999999999987553 4577888987543
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.55 E-value=2e-07 Score=81.83 Aligned_cols=67 Identities=21% Similarity=0.378 Sum_probs=59.4
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEe---cCCHHHHHHHHHHcCCceEEcC
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSG---NVDPSVLIKKLAKSGKHAELWG 75 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g---~v~pd~Ii~aI~kaGy~A~l~~ 75 (531)
+++++|+| +|+|.+|+.+|+++|.++++|..+++++...+++|+. .++++.|+++|+++||.+.++.
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME 73 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence 56788999 8999999999999999999999999999999999875 3577899999999999876543
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.24 E-value=1.8e-06 Score=80.90 Aligned_cols=64 Identities=17% Similarity=0.367 Sum_probs=55.1
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcC---CceE
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSG---KHAE 72 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaG---y~A~ 72 (531)
+.+++|+| +|+|.+|+.+|+++|.+++||..++|++...+++|+.+ ++++.|+++|++++ |.+.
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~ 89 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVS 89 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEE
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEE
Confidence 45677999 79999999999999999999999999999999999753 67788999999883 6553
No 40
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.22 E-value=2.4e-06 Score=96.09 Aligned_cols=64 Identities=11% Similarity=0.226 Sum_probs=57.9
Q ss_pred EEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCceEEc
Q 009590 11 TYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 11 kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A~l~ 74 (531)
+++|+| +|+|.+|+.+||++|++++||.+++|++..++++|+.+ +++++|+++|+++||++...
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~ 70 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDE 70 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccccc
Confidence 357899 79999999999999999999999999999999999853 68899999999999987544
No 41
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.15 E-value=5.8e-06 Score=72.82 Aligned_cols=63 Identities=21% Similarity=0.443 Sum_probs=55.4
Q ss_pred ceEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHHcCCce
Q 009590 9 IQTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAKSGKHA 71 (531)
Q Consensus 9 ~~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~kaGy~A 71 (531)
+.+++|+| +|+|.+|+.+|+++|.++++|..+++++...+++|+.+ ++++.|++.|+++||.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 45667899 79999999999999999999999999999999988743 57788999999999964
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=75.24 E-value=8.5 Score=33.05 Aligned_cols=64 Identities=19% Similarity=0.198 Sum_probs=43.2
Q ss_pred cceEEEEEEc-cccHHHHHHHHHHHhCCCCeeEEEee-----cCCCeE--EEEe-cCCHHHHHHHHHHcCCceE
Q 009590 8 KIQTYVLKVN-IHCDGCKHKVKKILQKIDGVFTTSID-----SEQGKV--TVSG-NVDPSVLIKKLAKSGKHAE 72 (531)
Q Consensus 8 ~~~kv~LkVg-M~C~~Ca~KVEKaL~ki~GV~svsVd-----l~~gkV--tV~g-~v~pd~Ii~aI~kaGy~A~ 72 (531)
..++++|.|- -+-+.- -.+.+.|.++++|..|++. .+...+ +|++ +++.++|.++|++.|-.+.
T Consensus 5 ~iRRlVLDVlKPh~P~i-vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIH 77 (100)
T 3bpd_A 5 GLRRLVLDVLKPHEPKT-IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIH 77 (100)
T ss_dssp SEEEEEEEEEEESCSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEE
T ss_pred cceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 3677788872 244443 3567778899998666543 333333 3444 5999999999999997654
No 43
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=74.05 E-value=9 Score=31.01 Aligned_cols=55 Identities=7% Similarity=0.019 Sum_probs=39.7
Q ss_pred EEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEe--cCCHHHHHHHHHHcCCceEEc
Q 009590 11 TYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSG--NVDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 11 kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g--~v~pd~Ii~aI~kaGy~A~l~ 74 (531)
.++|.+ ++.|+.-.-+++++|.++.- ...++|.. ....+.|.+.+++.||++..+
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~ 67 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAK 67 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 345677 79999999999999998732 13344443 245567888889999987644
No 44
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=71.33 E-value=18 Score=30.82 Aligned_cols=65 Identities=23% Similarity=0.290 Sum_probs=44.7
Q ss_pred cceEEEEEE--ccccHHHHHHHHHHHhCCCCeeEEEee-----cCCCeE--EEEe-cCCHHHHHHHHHHcCCceEE
Q 009590 8 KIQTYVLKV--NIHCDGCKHKVKKILQKIDGVFTTSID-----SEQGKV--TVSG-NVDPSVLIKKLAKSGKHAEL 73 (531)
Q Consensus 8 ~~~kv~LkV--gM~C~~Ca~KVEKaL~ki~GV~svsVd-----l~~gkV--tV~g-~v~pd~Ii~aI~kaGy~A~l 73 (531)
..++++|.| .+|-+.-. .+.+.|.++++|..|++. .+...+ +|++ +++.++|.++|++.|-.+..
T Consensus 3 ~irRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHS 77 (96)
T 2x3d_A 3 AIRRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHS 77 (96)
T ss_dssp CEEEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEe
Confidence 356778887 34666554 567778899998766543 333333 3444 49999999999999976543
No 45
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=70.40 E-value=12 Score=30.88 Aligned_cols=52 Identities=25% Similarity=0.282 Sum_probs=38.8
Q ss_pred EEEE-ccccHHHHHHHHHHHhCCC--CeeEEEeecCCCeEEEEec--CCHHHHHHHHHHcCCceEEc
Q 009590 13 VLKV-NIHCDGCKHKVKKILQKID--GVFTTSIDSEQGKVTVSGN--VDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 13 ~LkV-gM~C~~Ca~KVEKaL~ki~--GV~svsVdl~~gkVtV~g~--v~pd~Ii~aI~kaGy~A~l~ 74 (531)
+|.+ ++.|+.-.-+++++|.+++ | ..++|..+ .+.+.|.+.+++.||.+...
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~ 59 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAEGMGYQSEYL 59 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 3566 7899999999999999873 3 34455432 45678888999999987543
No 46
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=69.02 E-value=12 Score=31.54 Aligned_cols=54 Identities=17% Similarity=0.121 Sum_probs=39.8
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec--CCHHHHHHHHHHcCCceEEc
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN--VDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~--v~pd~Ii~aI~kaGy~A~l~ 74 (531)
.+|.+ ++.|+.-..+++++|.++.- ...++|..+ ...+.|.+.+++.||++...
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~ 83 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVLEI 83 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 45677 79999999999999998632 233445432 45678888999999987643
No 47
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=66.04 E-value=5.5 Score=33.51 Aligned_cols=36 Identities=17% Similarity=0.422 Sum_probs=26.5
Q ss_pred EEEEEEccccHHH------HHHHHHHHhCCCCeeEEEeecCC
Q 009590 11 TYVLKVNIHCDGC------KHKVKKILQKIDGVFTTSIDSEQ 46 (531)
Q Consensus 11 kv~LkVgM~C~~C------a~KVEKaL~ki~GV~svsVdl~~ 46 (531)
++.|.+.++|+.| ...|+.+|..++||..|+|.+..
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~ 83 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTF 83 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEec
Confidence 3456666677777 56789999999999888876443
No 48
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=65.86 E-value=21 Score=30.56 Aligned_cols=64 Identities=20% Similarity=0.287 Sum_probs=42.3
Q ss_pred ceEEEEEEc-cccHHHHHHHHHHHhCCCCeeEEEe-----ecCCCeEE--EEe-cCCHHHHHHHHHHcCCceEE
Q 009590 9 IQTYVLKVN-IHCDGCKHKVKKILQKIDGVFTTSI-----DSEQGKVT--VSG-NVDPSVLIKKLAKSGKHAEL 73 (531)
Q Consensus 9 ~~kv~LkVg-M~C~~Ca~KVEKaL~ki~GV~svsV-----dl~~gkVt--V~g-~v~pd~Ii~aI~kaGy~A~l 73 (531)
.++++|.|- -|-+.-. .+.+.|.+++||..+++ |.+...+. |++ +++.++|.++|++.|-.+..
T Consensus 6 irRlVLDVlKPh~p~i~-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHS 78 (97)
T 2raq_A 6 LIRIVLDILKPHEPIIP-EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHS 78 (97)
T ss_dssp EEEEEEEEECCSCSCHH-HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEe
Confidence 567788872 3444443 55667788888755543 34444444 444 59999999999999976543
No 49
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=64.07 E-value=1.4 Score=39.97 Aligned_cols=14 Identities=14% Similarity=0.247 Sum_probs=3.4
Q ss_pred HHHHHHHHhCCCCe
Q 009590 24 KHKVKKILQKIDGV 37 (531)
Q Consensus 24 a~KVEKaL~ki~GV 37 (531)
..+|+++++.-+.|
T Consensus 22 laRIKrIMK~dpdv 35 (140)
T 2byk_A 22 LSRVRTIMKSSMDT 35 (140)
T ss_dssp -------CCSSSSC
T ss_pred HHHHHHHHhcCccc
Confidence 34566666554443
No 50
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=62.04 E-value=1.5 Score=45.13 Aligned_cols=11 Identities=9% Similarity=0.150 Sum_probs=4.9
Q ss_pred HHHHHHHHHHh
Q 009590 22 GCKHKVKKILQ 32 (531)
Q Consensus 22 ~Ca~KVEKaL~ 32 (531)
....+|..+|.
T Consensus 42 ~~~~kl~~~~~ 52 (449)
T 3iot_A 42 KLEEKFPQVAA 52 (449)
T ss_dssp THHHHHHHHGG
T ss_pred HHHHHHHHHhh
Confidence 33444544444
No 51
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=61.39 E-value=7.3 Score=32.67 Aligned_cols=36 Identities=14% Similarity=0.290 Sum_probs=25.4
Q ss_pred EEEEEEccccHHH------HHHHHHHHhCCCCeeEEEeecCC
Q 009590 11 TYVLKVNIHCDGC------KHKVKKILQKIDGVFTTSIDSEQ 46 (531)
Q Consensus 11 kv~LkVgM~C~~C------a~KVEKaL~ki~GV~svsVdl~~ 46 (531)
++.|.+.++++.| ...|+++|+.+++|..|+|.+..
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~~ 84 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTF 84 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEec
Confidence 4556665665555 45678889999999888876443
No 52
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=60.23 E-value=2 Score=39.76 Aligned_cols=11 Identities=0% Similarity=0.365 Sum_probs=5.5
Q ss_pred HHHHHHHHHhC
Q 009590 23 CKHKVKKILQK 33 (531)
Q Consensus 23 Ca~KVEKaL~k 33 (531)
+..+|.+.|+.
T Consensus 5 a~~RL~kEl~~ 15 (169)
T 1ayz_A 5 ARRRLMRDFKR 15 (169)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44555555543
No 53
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=59.10 E-value=24 Score=29.63 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEe-cCCHHHHHHHHHHc
Q 009590 21 DGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSG-NVDPSVLIKKLAKS 67 (531)
Q Consensus 21 ~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g-~v~pd~Ii~aI~ka 67 (531)
+.-...|.+.|.++++|....++...+++.|+. ..+.++|.+.|+++
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~I 63 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESV 63 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHHH
Confidence 344678999999999996555666677887763 34666666666543
No 54
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=55.62 E-value=18 Score=34.88 Aligned_cols=27 Identities=22% Similarity=0.425 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhCCCCeeEEEeecCCC
Q 009590 21 DGCKHKVKKILQKIDGVFTTSIDSEQG 47 (531)
Q Consensus 21 ~~Ca~KVEKaL~ki~GV~svsVdl~~g 47 (531)
..|-+-+|+.+.+++||.++++-+..+
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG 75 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGG 75 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESS
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCC
Confidence 567777888899999999999877643
No 55
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=55.40 E-value=21 Score=34.20 Aligned_cols=28 Identities=21% Similarity=0.450 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHhCCCCeeEEEeecCCCe
Q 009590 21 DGCKHKVKKILQKIDGVFTTSIDSEQGK 48 (531)
Q Consensus 21 ~~Ca~KVEKaL~ki~GV~svsVdl~~gk 48 (531)
..|-+-+|+.+.+++||.++.+-+..+.
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~ 77 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGY 77 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSS
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCC
Confidence 5677778888999999999998766543
No 56
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=53.43 E-value=17 Score=33.88 Aligned_cols=46 Identities=15% Similarity=0.374 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhCCCCeeEEEeecCCC---------------eEEEEe---cCCHHHHHHHHHH
Q 009590 21 DGCKHKVKKILQKIDGVFTTSIDSEQG---------------KVTVSG---NVDPSVLIKKLAK 66 (531)
Q Consensus 21 ~~Ca~KVEKaL~ki~GV~svsVdl~~g---------------kVtV~g---~v~pd~Ii~aI~k 66 (531)
..|-+-+|..+.+|+||.++++-+..+ .|.|+. .|+.++|++.+-+
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~ 72 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQ 72 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHh
Confidence 467777899999999999999877654 445553 3788888877744
No 57
>3tj1_A RNA polymerase I-specific transcription initiatio RRN3; heat repeat, transcription factor, nucleus; 2.85A {Saccharomyces cerevisiae}
Probab=52.29 E-value=3 Score=46.57 Aligned_cols=8 Identities=38% Similarity=0.339 Sum_probs=3.3
Q ss_pred HHHHHHHh
Q 009590 25 HKVKKILQ 32 (531)
Q Consensus 25 ~KVEKaL~ 32 (531)
.-|+++|.
T Consensus 76 ~~V~~AL~ 83 (649)
T 3tj1_A 76 RFVKSALD 83 (649)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33444443
No 58
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=50.35 E-value=8.6 Score=32.72 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=25.7
Q ss_pred EEEEEEccccHHH------HHHHHHHH-hCCCCeeEEEeecCCC
Q 009590 11 TYVLKVNIHCDGC------KHKVKKIL-QKIDGVFTTSIDSEQG 47 (531)
Q Consensus 11 kv~LkVgM~C~~C------a~KVEKaL-~ki~GV~svsVdl~~g 47 (531)
++.|.+.++++.| ...|+.+| ..++||.+|+|.+...
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~~ 88 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVWN 88 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECCS
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEec
Confidence 3556666666666 56678888 8899998877765443
No 59
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=49.15 E-value=26 Score=33.32 Aligned_cols=27 Identities=30% Similarity=0.549 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhCCCCeeEEEeecCCC
Q 009590 21 DGCKHKVKKILQKIDGVFTTSIDSEQG 47 (531)
Q Consensus 21 ~~Ca~KVEKaL~ki~GV~svsVdl~~g 47 (531)
..|-+-+|..+.+++||.++.+-+..+
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG 35 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANG 35 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESC
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCC
Confidence 567777788899999999999876654
No 60
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=47.46 E-value=15 Score=31.08 Aligned_cols=54 Identities=9% Similarity=0.014 Sum_probs=38.1
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEe--cCCHHHHHHHHHHcCCceEEc
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSG--NVDPSVLIKKLAKSGKHAELW 74 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g--~v~pd~Ii~aI~kaGy~A~l~ 74 (531)
.+|.+ ++.|+.-.-+++++|.+++- ...++|.. ..+.+.|.+.+++.||++..+
T Consensus 28 ~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 28 YRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCPQSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp EEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred eEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCcchHHHHHHHHHHCCCEEEEE
Confidence 34555 68999999999999998732 12334432 245677888899999987543
No 61
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=45.44 E-value=38 Score=29.71 Aligned_cols=56 Identities=9% Similarity=0.054 Sum_probs=42.6
Q ss_pred EEEEE-ccccH-HHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHc
Q 009590 12 YVLKV-NIHCD-GCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKS 67 (531)
Q Consensus 12 v~LkV-gM~C~-~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~ka 67 (531)
+.|.| ++... .+...|+.+++...-|..|++.....+..|+....+++..++|+++
T Consensus 19 ~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~~l 76 (121)
T 1owx_A 19 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDA 76 (121)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHHHh
Confidence 56778 56666 7799999999998889999998888888888754255556666654
No 62
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=44.86 E-value=24 Score=33.84 Aligned_cols=46 Identities=20% Similarity=0.343 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhCCCCeeEEEeecCCC---------------eEEEEe---cCCHHHHHHHHHH
Q 009590 21 DGCKHKVKKILQKIDGVFTTSIDSEQG---------------KVTVSG---NVDPSVLIKKLAK 66 (531)
Q Consensus 21 ~~Ca~KVEKaL~ki~GV~svsVdl~~g---------------kVtV~g---~v~pd~Ii~aI~k 66 (531)
..|-+-+|..+.+++||.++++-+..+ .|.|+. .|+.++|++.+-+
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~ 95 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQ 95 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 566777788899999999999876544 344553 3677888776643
No 63
>1d7q_A Translation initiation factor 1A; OB-fold, beta-barrel, RNA-binding protein, gene regulation; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=44.49 E-value=16 Score=33.36 Aligned_cols=6 Identities=17% Similarity=0.656 Sum_probs=2.3
Q ss_pred CCeEEE
Q 009590 46 QGKVTV 51 (531)
Q Consensus 46 ~gkVtV 51 (531)
...++|
T Consensus 43 n~~f~V 48 (143)
T 1d7q_A 43 NGRLEA 48 (143)
T ss_dssp SSEEEE
T ss_pred CCEEEE
Confidence 333333
No 64
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=42.54 E-value=24 Score=31.86 Aligned_cols=18 Identities=28% Similarity=0.324 Sum_probs=12.7
Q ss_pred CeeEEEeecC-CCeEEEEe
Q 009590 36 GVFTTSIDSE-QGKVTVSG 53 (531)
Q Consensus 36 GV~svsVdl~-~gkVtV~g 53 (531)
.|..+.|++. ..+|+|..
T Consensus 24 ~~~~v~V~~~~~~~l~~~~ 42 (150)
T 2kmw_A 24 DAKDISVKCEPQGLFSFSA 42 (150)
T ss_dssp SEEEEEECCCTTEEEEEEE
T ss_pred CCCceEEEEecCCEEEEEE
Confidence 3567788888 67777765
No 65
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=42.41 E-value=59 Score=26.55 Aligned_cols=55 Identities=11% Similarity=0.186 Sum_probs=29.5
Q ss_pred EEEEE-ccccHHHHHHHH---HHHhCCC--CeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceE
Q 009590 12 YVLKV-NIHCDGCKHKVK---KILQKID--GVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAE 72 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVE---KaL~ki~--GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~ 72 (531)
+.|.+ .-+|..|...+. +...++. +|.-+.|+... ...+.+.+.+.+++.++...
T Consensus 37 ~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~------~~~~~~~~~~~~~~~~~~~~ 97 (145)
T 3erw_A 37 TILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN------SEQNQQVVEDFIKANKLTFP 97 (145)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG------GSSCHHHHHHHHHHTTCCSC
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC------CcCCHHHHHHHHHHcCCcee
Confidence 34444 679999976543 3333332 33333332211 11377788888887776543
No 66
>1rm1_C Transcription initiation factor IIA large chain; yeast TFIIA, TBP protein, ATA-box DNA, transcription/DNA complex; 2.50A {Saccharomyces cerevisiae}
Probab=42.04 E-value=8.2 Score=38.80 Aligned_cols=7 Identities=29% Similarity=0.368 Sum_probs=3.0
Q ss_pred HHHHcCC
Q 009590 63 KLAKSGK 69 (531)
Q Consensus 63 aI~kaGy 69 (531)
+|..+++
T Consensus 45 KL~qsgv 51 (286)
T 1rm1_C 45 KLTETKV 51 (286)
T ss_dssp HHHHHTS
T ss_pred HHHhcCc
Confidence 3444443
No 67
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=41.94 E-value=28 Score=34.61 Aligned_cols=27 Identities=33% Similarity=0.559 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhCCCCeeEEEeecCCC
Q 009590 21 DGCKHKVKKILQKIDGVFTTSIDSEQG 47 (531)
Q Consensus 21 ~~Ca~KVEKaL~ki~GV~svsVdl~~g 47 (531)
..|-|-+|+.+.+++||.++.|-+..+
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG 127 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQG 127 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESS
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCC
Confidence 567777889999999999999876654
No 68
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=41.49 E-value=80 Score=25.31 Aligned_cols=49 Identities=14% Similarity=0.142 Sum_probs=27.9
Q ss_pred EEEEE-ccccHHHHHHHH---HHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCC
Q 009590 12 YVLKV-NIHCDGCKHKVK---KILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGK 69 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVE---KaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy 69 (531)
+.|.+ .-+|..|...+. ++..+...|.-+.|+ .+.+.+.+.+.+++.++
T Consensus 28 ~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~---------~~~~~~~~~~~~~~~~~ 80 (136)
T 1zzo_A 28 AVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVA---------GLDQVPAMQEFVNKYPV 80 (136)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEE---------CSSCHHHHHHHHHHTTC
T ss_pred EEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEe---------CCCCHHHHHHHHHHcCC
Confidence 34444 679999976543 333333344333333 23456777777777776
No 69
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=41.45 E-value=74 Score=25.70 Aligned_cols=53 Identities=15% Similarity=0.117 Sum_probs=29.6
Q ss_pred EEEEE-ccccHHHHHHHH---HHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEE
Q 009590 12 YVLKV-NIHCDGCKHKVK---KILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAEL 73 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVE---KaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l 73 (531)
+.|.+ .-+|..|...+. ++..+...|.-+.|+ .+.+.+.+.+.+++.++...+
T Consensus 27 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~---------~~~~~~~~~~~~~~~~~~~~~ 83 (136)
T 1lu4_A 27 AVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIA---------TRADVGAMQSFVSKYNLNFTN 83 (136)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEE---------CSSCHHHHHHHHHHHTCCSEE
T ss_pred EEEEEECCcChhHHHHHHHHHHHHHHCCCcEEEEEE---------cCCCHHHHHHHHHHcCCCceE
Confidence 34444 678999976443 333333344333333 233577777777777765433
No 70
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=41.13 E-value=60 Score=27.15 Aligned_cols=51 Identities=8% Similarity=0.187 Sum_probs=26.8
Q ss_pred EEEEE-ccccHHHHHHHHH---HHhCCC--CeeEEEeecCCCeEEEEecCC-HHHHHHHHHHcCCce
Q 009590 12 YVLKV-NIHCDGCKHKVKK---ILQKID--GVFTTSIDSEQGKVTVSGNVD-PSVLIKKLAKSGKHA 71 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEK---aL~ki~--GV~svsVdl~~gkVtV~g~v~-pd~Ii~aI~kaGy~A 71 (531)
++|.+ .-+|..|...+.. ...++. +|.-+.|+ .+.+ .+.+.+.+++.++..
T Consensus 31 vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~---------~d~~~~~~~~~~~~~~~~~~ 88 (154)
T 3kcm_A 31 VIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVS---------IDEGGKVAVEEFFRKTGFTL 88 (154)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEE---------CCTTHHHHHHHHHHHHCCCC
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEE---------cCCcchHHHHHHHHHcCCCe
Confidence 44444 6799999875433 233332 23222222 2222 566777777776653
No 71
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=39.87 E-value=41 Score=34.29 Aligned_cols=46 Identities=24% Similarity=0.405 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhCCCCeeEEEeecCCCe-----------------EEEEe---cCCHHHHHHHHHH
Q 009590 21 DGCKHKVKKILQKIDGVFTTSIDSEQGK-----------------VTVSG---NVDPSVLIKKLAK 66 (531)
Q Consensus 21 ~~Ca~KVEKaL~ki~GV~svsVdl~~gk-----------------VtV~g---~v~pd~Ii~aI~k 66 (531)
..|-+-||.++.+|+||.++.+-++.+. |.|+. .|+.++|++.+-+
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~ 74 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFR 74 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHh
Confidence 5677888999999999999998766543 44543 3677777776643
No 72
>3hou_D DNA-directed RNA polymerase II subunit RPB4; RNA polymerase II, metal-binding, transcription bubble; HET: BRU; 3.20A {Saccharomyces cerevisiae} PDB: 1nt9_D 1y1w_D 1y1y_D 1y77_D* 2b63_D* 2b8k_D 2ja5_D* 2ja6_D* 2ja7_D* 2ja8_D* 2r7z_D 2r92_D 2r93_D 1y1v_D* 3fki_D 3h3v_E 2vum_D* 3hov_D* 3how_D* 3hox_D* ...
Probab=39.32 E-value=4 Score=39.63 Aligned_cols=12 Identities=25% Similarity=0.495 Sum_probs=7.2
Q ss_pred ccccccceeecC
Q 009590 86 LPNQFKNMQLDN 97 (531)
Q Consensus 86 ~~~q~~~l~I~~ 97 (531)
+-..|.+..|.+
T Consensus 29 lg~efql~q~~~ 40 (221)
T 3hou_D 29 LGQEFQLKQINH 40 (221)
T ss_dssp CCGGGCSEEECT
T ss_pred cCcccceeeccc
Confidence 445666666654
No 73
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=37.41 E-value=7 Score=39.57 Aligned_cols=11 Identities=18% Similarity=0.280 Sum_probs=6.6
Q ss_pred CCHHHHHHHHH
Q 009590 55 VDPSVLIKKLA 65 (531)
Q Consensus 55 v~pd~Ii~aI~ 65 (531)
.+.+.|++.|+
T Consensus 110 ~~~~~i~~~i~ 120 (367)
T 3us3_A 110 FSADTLVEFLL 120 (367)
T ss_dssp CSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 45666666554
No 74
>3iab_B Ribonucleases P/MRP protein subunit POP7; RNAse P, ribonuclease P, ribonuclease MRP, POP6, POP6P, POP7, POP7P, NME1, yeast, tRNA; 2.70A {Saccharomyces cerevisiae}
Probab=37.16 E-value=7.7 Score=35.29 Aligned_cols=7 Identities=14% Similarity=0.031 Sum_probs=2.5
Q ss_pred EEecCCH
Q 009590 51 VSGNVDP 57 (531)
Q Consensus 51 V~g~v~p 57 (531)
|...+..
T Consensus 35 V~skTpf 41 (140)
T 3iab_B 35 VKSTTPY 41 (140)
T ss_dssp CCSSCCH
T ss_pred EecCCch
Confidence 3333333
No 75
>3iab_B Ribonucleases P/MRP protein subunit POP7; RNAse P, ribonuclease P, ribonuclease MRP, POP6, POP6P, POP7, POP7P, NME1, yeast, tRNA; 2.70A {Saccharomyces cerevisiae}
Probab=36.08 E-value=6.9 Score=35.60 Aligned_cols=9 Identities=22% Similarity=0.527 Sum_probs=4.0
Q ss_pred HHHHHHHHh
Q 009590 24 KHKVKKILQ 32 (531)
Q Consensus 24 a~KVEKaL~ 32 (531)
..+|++.|.
T Consensus 45 vkRi~KlL~ 53 (140)
T 3iab_B 45 LKRINKFLD 53 (140)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344444444
No 76
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=35.44 E-value=1.2e+02 Score=25.80 Aligned_cols=58 Identities=17% Similarity=0.276 Sum_probs=30.3
Q ss_pred EEEEE-ccccHHHHHHHH---HHHhCCCCeeEEEeecCCCe----EEE-----EecCCHHHHHHHHHHcCC
Q 009590 12 YVLKV-NIHCDGCKHKVK---KILQKIDGVFTTSIDSEQGK----VTV-----SGNVDPSVLIKKLAKSGK 69 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVE---KaL~ki~GV~svsVdl~~gk----VtV-----~g~v~pd~Ii~aI~kaGy 69 (531)
++|.+ .-+|..|...+. +...+..+|.-+.|+..... +.+ ....+.+++.+.+++.++
T Consensus 40 ~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (165)
T 3ha9_A 40 VILWFMAAWCPSCVYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGD 110 (165)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSC
T ss_pred EEEEEECCCCcchhhhHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCC
Confidence 44444 679999976553 33333345544444433100 000 001467778888887776
No 77
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=35.10 E-value=8.8 Score=38.83 Aligned_cols=16 Identities=0% Similarity=0.081 Sum_probs=8.6
Q ss_pred CCHHHHHHHHHHcCCc
Q 009590 55 VDPSVLIKKLAKSGKH 70 (531)
Q Consensus 55 v~pd~Ii~aI~kaGy~ 70 (531)
.+.+.|.+-|+..-+.
T Consensus 213 ~~~~~l~~fi~~~~~p 228 (367)
T 3us3_A 213 NSEEEIVNFVEEHRRS 228 (367)
T ss_dssp CCHHHHHHHHHHTCSC
T ss_pred CCHHHHHHHHHHcCcc
Confidence 4555666666554443
No 78
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=34.63 E-value=14 Score=29.38 Aligned_cols=51 Identities=16% Similarity=0.128 Sum_probs=36.5
Q ss_pred EEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec--CCHHHHHHHHHHcCCceE
Q 009590 13 VLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN--VDPSVLIKKLAKSGKHAE 72 (531)
Q Consensus 13 ~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~--v~pd~Ii~aI~kaGy~A~ 72 (531)
+|.+ ++.|+.-.-+++++|.++.- ...++|..+ .+.+.|.+.+++.||++.
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~---------G~~L~V~~dd~~a~~di~~~~~~~G~~~~ 61 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKV---------GEVISVYSTDAGTKKDAPAWIQKSGQELV 61 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCT---------TCCEECCBSSSCHHHHHHHHHHHHTEEEC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEE
Confidence 3555 78999999999999998732 123444432 345788888999999764
No 79
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=33.30 E-value=95 Score=25.93 Aligned_cols=55 Identities=18% Similarity=0.248 Sum_probs=30.2
Q ss_pred EEEEEE-ccccHHHHHHHHHH---HhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEE
Q 009590 11 TYVLKV-NIHCDGCKHKVKKI---LQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAEL 73 (531)
Q Consensus 11 kv~LkV-gM~C~~Ca~KVEKa---L~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l 73 (531)
.++|.+ .-+|..|...+... ..+. +|.-+.|+.. ...+.+++.+.+++.++...+
T Consensus 32 ~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d-------~~~~~~~~~~~~~~~~~~~~~ 90 (154)
T 3ia1_A 32 PAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVISRE-------PRDTREVVLEYMKTYPRFIPL 90 (154)
T ss_dssp SEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEECC-------TTCCHHHHHHHHTTCTTEEEC
T ss_pred eEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEeCC-------CcccHHHHHHHHHHcCCCccc
Confidence 344444 67999997654332 2223 3333333321 134677777777777775443
No 80
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=32.39 E-value=58 Score=27.17 Aligned_cols=53 Identities=15% Similarity=0.227 Sum_probs=28.1
Q ss_pred EEEEE-ccccHHHHHHHHHH---HhCCC--CeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEE
Q 009590 12 YVLKV-NIHCDGCKHKVKKI---LQKID--GVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAEL 73 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKa---L~ki~--GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l 73 (531)
++|.+ .-+|..|...+... ..++. +|.-+.| ..+.+.+++.+.+++.++...+
T Consensus 31 vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v---------~~d~~~~~~~~~~~~~~~~~~~ 89 (152)
T 3gl3_A 31 VYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAV---------NLDAKTGDAMKFLAQVPAEFTV 89 (152)
T ss_dssp EEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEE---------ECCSSHHHHHHHHHHSCCCSEE
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEE---------ECCCCHHHHHHHHHHcCCCCce
Confidence 34444 67899997655332 22221 2322222 2233567777788877765443
No 81
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=32.19 E-value=98 Score=25.15 Aligned_cols=57 Identities=9% Similarity=0.055 Sum_probs=38.7
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCC--C----eEEEEecCCHHHHHHHHHHc
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQ--G----KVTVSGNVDPSVLIKKLAKS 67 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~--g----kVtV~g~v~pd~Ii~aI~ka 67 (531)
...+|-| ++........|++.+...-.|..+.+-... . -+.|+. .+.++..++|+.+
T Consensus 14 ~~~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f-~~~~~a~~A~~~l 77 (115)
T 2dgo_A 14 NHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSF-FNKWDAENAIQQM 77 (115)
T ss_dssp TCEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEE-SSHHHHHHHHHHT
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEE-CCHHHHHHHHHHh
Confidence 3456677 677777788899999988788888875442 2 233444 4677777777653
No 82
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=31.39 E-value=2.2e+02 Score=23.41 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=27.1
Q ss_pred EEEEE-ccccHHHHHHHHHHHh------CC--CCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCc
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQ------KI--DGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKH 70 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~------ki--~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~ 70 (531)
++|.+ .-+|..|...+....+ +. .+|.-+.|+ .+.+.+.+.+.+++..+.
T Consensus 34 vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~---------~d~~~~~~~~~~~~~~~~ 92 (142)
T 3eur_A 34 TLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIY---------PDEELDEWKKHRNDFAKE 92 (142)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEE---------CSSCHHHHHHHGGGSCTT
T ss_pred EEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEE---------cCCCHHHHHHHHHhcccc
Confidence 44445 6789999765433222 11 344333332 233556677777776654
No 83
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=30.45 E-value=1.6e+02 Score=24.01 Aligned_cols=51 Identities=12% Similarity=0.133 Sum_probs=28.3
Q ss_pred EEEEE-ccccHHHHHHHH---------HHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceE
Q 009590 12 YVLKV-NIHCDGCKHKVK---------KILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAE 72 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVE---------KaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~ 72 (531)
+.|.+ .-+|..|...+. +.+.. .+|.-+.|+ .+.+.+.+.+.+++.++...
T Consensus 30 vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~-~~~~~v~v~---------~d~~~~~~~~~~~~~~~~~~ 90 (142)
T 3ewl_A 30 TMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN-GTLRVLAIY---------PDENREEWATKAVYMPQGWI 90 (142)
T ss_dssp EEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH-TSEEEEEEE---------CSSCHHHHHHHHTTSCTTCE
T ss_pred EEEEEECCCCccHHHHHHHHHHhHHHHHHhcc-CCeEEEEEE---------ecCCHHHHHHHHHHcCCCcc
Confidence 44445 679999988632 22221 234333332 23466777777777776543
No 84
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=30.10 E-value=1.3e+02 Score=25.01 Aligned_cols=49 Identities=12% Similarity=0.231 Sum_probs=26.8
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCC---CCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCc
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKI---DGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKH 70 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki---~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~ 70 (531)
++|.+ .-+|..|...+. .|.++ ..|.-+. |..+.+.+.+.+.+++.++.
T Consensus 45 ~ll~f~~~~C~~C~~~~~-~l~~l~~~~~v~~v~---------v~~~~~~~~~~~~~~~~~~~ 97 (156)
T 1kng_A 45 SLVNVWASWCVPCHDEAP-LLTELGKDKRFQLVG---------INYKDAADNARRFLGRYGNP 97 (156)
T ss_dssp EEEEEECTTCHHHHHHHH-HHHHHTTCTTSEEEE---------EEESCCHHHHHHHHHHHCCC
T ss_pred EEEEEEcccCHhHHHHHH-HHHHHHhcCCeEEEE---------EECCCCHHHHHHHHHHcCCC
Confidence 34444 679999976443 33332 1132222 22334667777777776654
No 85
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=29.93 E-value=1e+02 Score=25.21 Aligned_cols=56 Identities=14% Similarity=0.342 Sum_probs=28.6
Q ss_pred EEEEE-ccccHHHHHHHHH---HHhCCCC-eeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCce
Q 009590 12 YVLKV-NIHCDGCKHKVKK---ILQKIDG-VFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHA 71 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEK---aL~ki~G-V~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A 71 (531)
++|.+ .-+|..|...+.. +..++.. |.-+.|+..... ...+++++.+.+++.++..
T Consensus 32 ~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~~~~~~~~~ 92 (148)
T 2b5x_A 32 TLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSE----DDLDPGKIKETAAEHDITQ 92 (148)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCST----TTSSHHHHHHHHHHTTCCS
T ss_pred EEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCc----cccCHHHHHHHHHHcCCCc
Confidence 44444 6789999754432 2222222 333333322110 1136788888888877653
No 86
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.66 E-value=98 Score=23.54 Aligned_cols=55 Identities=11% Similarity=0.002 Sum_probs=40.9
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHc
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKS 67 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~ka 67 (531)
.+|-| ++........|++.+...-.|..+.+....+-+.|+.. +.+....+|+.+
T Consensus 13 ~~l~V~~l~~~~t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~-~~~~A~~a~~~l 68 (85)
T 2ytc_A 13 TTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA-TRQAAEVAAEKS 68 (85)
T ss_dssp CCEEEECCTTTSCHHHHHHHHHTTSCEEEEEEEGGGTEEEEEES-SHHHHHHHHHTT
T ss_pred cEEEEcCCCCCCCHHHHHHHHHhCCCEeEEEEECCCCEEEEEEC-CHHHHHHHHHHh
Confidence 34667 67666777889999998878988888776666777764 667777777754
No 87
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.95 E-value=1.5e+02 Score=23.52 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=37.9
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecC----CCeEEEEecCCHHHHHHHHHH
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSE----QGKVTVSGNVDPSVLIKKLAK 66 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~----~gkVtV~g~v~pd~Ii~aI~k 66 (531)
.+|-| ++........|++.+...--|..+.+-.. ..-+.|+. .+.++..++|+.
T Consensus 16 ~~l~V~nlp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f-~~~~~a~~A~~~ 74 (103)
T 2cq3_A 16 KRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTF-ENSADADRAREK 74 (103)
T ss_dssp CEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEE-SCHHHHHHHHHH
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEE-CCHHHHHHHHHH
Confidence 45667 67777778889999999888888888654 33455655 366666667764
No 88
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.99 E-value=1.3e+02 Score=24.00 Aligned_cols=55 Identities=13% Similarity=0.138 Sum_probs=37.3
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecC-------CCeEEEEecCCHHHHHHHHHHc
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSE-------QGKVTVSGNVDPSVLIKKLAKS 67 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~-------~gkVtV~g~v~pd~Ii~aI~ka 67 (531)
.+|-| ++........|++.+...-.|..+.+-.. ..-+.|+. .+.++..++|+.+
T Consensus 16 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f-~~~~~a~~A~~~l 78 (107)
T 2cph_A 16 SKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDF-ITKQDAKKAFNAL 78 (107)
T ss_dssp CCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEE-SSHHHHHHHHHHH
T ss_pred CEEEEeCCCCcCCHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEE-CCHHHHHHHHHHh
Confidence 45667 66655567779999998888888888544 34455655 3666667777664
No 89
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=26.94 E-value=1.4e+02 Score=24.12 Aligned_cols=55 Identities=13% Similarity=0.096 Sum_probs=39.5
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcC
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSG 68 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaG 68 (531)
++|-| ++.-......|+..+...--|..+.+-.. .-..|+.. +.++..++|+.+-
T Consensus 16 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~~~i~~~-g~afV~f~-~~~~a~~Ai~~l~ 71 (108)
T 1x4c_A 16 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-GTGVVEFV-RKEDMTYAVRKLD 71 (108)
T ss_dssp CEEEEESCCSSCCHHHHHHHHGGGSCEEEEEEETT-TEEEEEES-SHHHHHHHHHHSS
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCEeEEEEecC-CEEEEEEC-CHHHHHHHHHHHC
Confidence 45667 67666667889999998877888888655 66666653 6777777887543
No 90
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=26.84 E-value=63 Score=27.74 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=30.6
Q ss_pred ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCC-ce
Q 009590 17 NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGK-HA 71 (531)
Q Consensus 17 gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy-~A 71 (531)
.-.|+.|. ++.+.|.. .+|.-..+++.. ...+.++|...+++++. .+
T Consensus 12 ~p~C~~c~-ka~~~L~~-~gi~~~~~di~~------~~~~~~eL~~~l~~~g~~~~ 59 (121)
T 3rdw_A 12 NPRCSKSR-ETLALVEQ-QGITPQVVLYLE------TPPSVDKLKELLQQLGFSDA 59 (121)
T ss_dssp CTTCHHHH-HHHHHHHT-TTCCCEEECTTT------SCCCHHHHHHHHHHTTCSSG
T ss_pred CCCCHHHH-HHHHHHHH-cCCCcEEEeecc------CCCcHHHHHHHHHhcCCcCH
Confidence 46899998 55556654 455433444333 23578889999999987 54
No 91
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=25.29 E-value=2.4e+02 Score=23.15 Aligned_cols=50 Identities=10% Similarity=0.074 Sum_probs=28.2
Q ss_pred EEEEE-ccccHHHHHHHHH---HHhCCC--CeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCc
Q 009590 12 YVLKV-NIHCDGCKHKVKK---ILQKID--GVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKH 70 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEK---aL~ki~--GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~ 70 (531)
++|.+ .-+|..|...+.. ...+.. +|.-+.|+ .+.+.+++.+.+++.++.
T Consensus 35 vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs---------~d~~~~~~~~~~~~~~~~ 90 (143)
T 4fo5_A 35 TLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSIS---------MDEKESIFTETVKIDKLD 90 (143)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEE---------CCSCHHHHHHHHHHHTCC
T ss_pred EEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEE---------ccCCHHHHHHHHHHhCCC
Confidence 44444 6789999876433 333332 23322222 233567778888877764
No 92
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=24.31 E-value=1.5e+02 Score=26.02 Aligned_cols=57 Identities=18% Similarity=0.194 Sum_probs=32.2
Q ss_pred ceEEEEEE-c-cccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHH
Q 009590 9 IQTYVLKV-N-IHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAK 66 (531)
Q Consensus 9 ~~kv~LkV-g-M~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~k 66 (531)
..++.|+| + ...-.-...+.+...++ ++.-+--|+.+++|+|... ...+++++.|++
T Consensus 33 i~t~~frV~G~VQGVGFR~~v~~~A~~l-gL~G~VrN~~dG~Vei~~eG~~~~v~~f~~~l~~ 94 (121)
T 2lxf_A 33 VTTLCYRVTGKVQGVFFRKYTKKEADAL-SLVGYVTNNEDGSVSGVVQGPKEQVDAFVKYLHK 94 (121)
T ss_dssp EEEEEEEEEECTTCCCCHHHHHHHHHHH-TCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEeeCCcCchHHHHHHHHHc-CCEEEEEECCCCCEEEEEEECHHHHHHHHHHHHh
Confidence 45677887 4 32222222332222222 6667777888887877632 455667777764
No 93
>3fze_A Protein STE5; alpha/beta/alpha, VWA-like fold (SCOP), cytoplasm, pheromone response, phosphoprotein, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 4f2h_A
Probab=24.15 E-value=22 Score=33.84 Aligned_cols=60 Identities=12% Similarity=0.114 Sum_probs=35.4
Q ss_pred ceEEEEEEc---cccHHHHHHHHHHHh----CCCCeeEEEeecCCCeEEEEe---cC-CHHHHHHHHHHcC
Q 009590 9 IQTYVLKVN---IHCDGCKHKVKKILQ----KIDGVFTTSIDSEQGKVTVSG---NV-DPSVLIKKLAKSG 68 (531)
Q Consensus 9 ~~kv~LkVg---M~C~~Ca~KVEKaL~----ki~GV~svsVdl~~gkVtV~g---~v-~pd~Ii~aI~kaG 68 (531)
.-.++|.|+ +.-..+...|...|. +.+...-.-||.+...++... .+ +.+.|...+++..
T Consensus 19 ~L~ivlQiD~~Kl~~~~~~~~i~NslkAL~~Kf~~~k~C~VD~~g~V~~~~~~~~~i~~~~~l~~~~~~~~ 89 (196)
T 3fze_A 19 NLAIILQIDFTKLKEEDSLIVVYNSLKALTIKFARLQFCFVDRNNYVLDYGSVLHKIDSLDSISNLKSKSS 89 (196)
T ss_dssp EEEEEEEECGGGCCSTHHHHHHHHHHHHHHHHCTTCEEEEEETTSBEEEEEEHHHHCCSHHHHHGGGGCCC
T ss_pred cEEEEEEecHHHhccCCcEEeehHHHHHHHhccCcceEEEEeCCCCEEEeehHHhhhhhhhhhhhhhcccC
Confidence 344667774 344667665555444 557888888888887776542 12 4455555554433
No 94
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=23.86 E-value=2.4e+02 Score=21.96 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=19.4
Q ss_pred EEEEE-ccccHHHHHH---HHHHHhCCCCeeEEEeecC
Q 009590 12 YVLKV-NIHCDGCKHK---VKKILQKIDGVFTTSIDSE 45 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~K---VEKaL~ki~GV~svsVdl~ 45 (531)
+.+.+ .-+|..|... ++++....+.|.-+.||..
T Consensus 21 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~ 58 (105)
T 4euy_A 21 VLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQ 58 (105)
T ss_dssp EEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEEC
T ss_pred EEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECC
Confidence 44555 5689999753 3444444455555555443
No 95
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=22.70 E-value=71 Score=27.15 Aligned_cols=35 Identities=9% Similarity=0.435 Sum_probs=19.3
Q ss_pred EEEEE-ccccHHHHHHH---HHHHhCCC--CeeEEEeecCC
Q 009590 12 YVLKV-NIHCDGCKHKV---KKILQKID--GVFTTSIDSEQ 46 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KV---EKaL~ki~--GV~svsVdl~~ 46 (531)
++|.+ .-+|..|...+ ++...++. +|.-+.|+...
T Consensus 44 vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 84 (158)
T 3hdc_A 44 VLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK 84 (158)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH
Confidence 44444 67899997644 33333443 55555555443
No 96
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=22.55 E-value=1.9e+02 Score=23.70 Aligned_cols=54 Identities=9% Similarity=0.167 Sum_probs=37.3
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecC------CCeEEEEecCCHHHHHHHHHH
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSE------QGKVTVSGNVDPSVLIKKLAK 66 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~------~gkVtV~g~v~pd~Ii~aI~k 66 (531)
.+|-| ++........|+..+...--|..|.+-.. .+-+.|+. .+.++...+|+.
T Consensus 23 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f-~~~~~a~~A~~~ 83 (126)
T 3ex7_B 23 WILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY-ETYKEAQAAMEG 83 (126)
T ss_dssp EEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEE-SSHHHHHHHHHH
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEE-CCHHHHHHHHHH
Confidence 45677 67666677889999998888888887544 33455655 366666666654
No 97
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=22.46 E-value=1.4e+02 Score=28.65 Aligned_cols=54 Identities=17% Similarity=0.238 Sum_probs=32.9
Q ss_pred cccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEe-cCCHHHHHHHHHHcCCceEEcCc
Q 009590 18 IHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSG-NVDPSVLIKKLAKSGKHAELWGA 76 (531)
Q Consensus 18 M~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g-~v~pd~Ii~aI~kaGy~A~l~~~ 76 (531)
--|..|+.+|..-|..-+.|. ++|- .. ++.. .....+-++.|.++|..+.+...
T Consensus 109 SPC~~CA~~v~~FL~~~~~v~-L~If--~a--RLY~~~~~~~~gLr~L~~aG~~v~iM~~ 163 (203)
T 3v4k_A 109 SPCFSCAQEMAKFISKNKHVS-LCIK--TA--RIYDDQGRCQEGLRTLAEAGAKISIMTY 163 (203)
T ss_pred CChHHHHHHHHHHHhhCCCeE-EEEE--EE--eecccCchHHHHHHHHHHCCCeEEecCH
Confidence 359999999999999877763 2221 11 1111 22334556677778887765443
No 98
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=22.39 E-value=84 Score=26.25 Aligned_cols=50 Identities=14% Similarity=0.290 Sum_probs=26.6
Q ss_pred EEEEE-ccccHHHHHHHHHH---HhCCC--CeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCc
Q 009590 12 YVLKV-NIHCDGCKHKVKKI---LQKID--GVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKH 70 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKa---L~ki~--GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~ 70 (531)
++|.+ .-+|..|...+... ..++. +|.-+.| ..+.+.+.+.+.+++.++.
T Consensus 29 vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v---------~~d~~~~~~~~~~~~~~~~ 84 (151)
T 2f9s_A 29 VFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAV---------NVGESKIAVHNFMKSYGVN 84 (151)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEE---------EESCCHHHHHHHHHHHTCC
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEE---------ECCCCHHHHHHHHHHcCCC
Confidence 44444 67899997655432 22221 2332222 2233566777777777664
No 99
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.28 E-value=2.4e+02 Score=23.03 Aligned_cols=55 Identities=9% Similarity=0.065 Sum_probs=39.3
Q ss_pred EEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHH
Q 009590 11 TYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAK 66 (531)
Q Consensus 11 kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~k 66 (531)
..+|-| ++....-...|+.++...-.|..+.+......+.|+.. +.+....+|+.
T Consensus 10 ~~~l~V~nLp~~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~-~~~~A~~Ai~~ 65 (111)
T 1whx_A 10 KTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFL-EPLEARKAFRH 65 (111)
T ss_dssp EEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEES-CHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeC-CHHHHHHHHHH
Confidence 456777 67766677889999998888888888766666777764 55555556654
No 100
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=22.23 E-value=1.4e+02 Score=28.13 Aligned_cols=63 Identities=16% Similarity=0.199 Sum_probs=40.1
Q ss_pred EEEEEEc-cccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEEcCc
Q 009590 11 TYVLKVN-IHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAELWGA 76 (531)
Q Consensus 11 kv~LkVg-M~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l~~~ 76 (531)
.+++-|. --|..|+..|-.+|...++|..|-+-...- .. .+......++.|+++|.+++.+..
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~d~--~~-~~p~~~~g~~~L~~aGI~V~~~~~ 147 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLF--MW-EEPEIQAALKKLKEAGCKLRIMKP 147 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEeecC--Cc-CChHHHHHHHHHHHCCCEEEEecH
Confidence 3555564 369999999999999888886555421100 00 011124567888999998876543
No 101
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.15 E-value=2.6e+02 Score=21.78 Aligned_cols=55 Identities=16% Similarity=0.144 Sum_probs=36.9
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCC------CeEEEEecCCHHHHHHHHHHc
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQ------GKVTVSGNVDPSVLIKKLAKS 67 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~------gkVtV~g~v~pd~Ii~aI~ka 67 (531)
.+|-| ++........|++.+...--|..+.+-... +-+.|+. .+.++..++|+.+
T Consensus 9 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f-~~~~~a~~A~~~l 70 (99)
T 1whw_A 9 GRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTF-MFPEHAVKAYAEV 70 (99)
T ss_dssp EEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEE-SSHHHHHHHHHHT
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEE-CCHHHHHHHHHHh
Confidence 45667 676666677899999988888888875432 3455655 3666666777543
No 102
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=21.90 E-value=1.8e+02 Score=24.19 Aligned_cols=57 Identities=12% Similarity=0.060 Sum_probs=33.2
Q ss_pred ceEEEEEE-c-cccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEec---CCHHHHHHHHHH
Q 009590 9 IQTYVLKV-N-IHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGN---VDPSVLIKKLAK 66 (531)
Q Consensus 9 ~~kv~LkV-g-M~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~---v~pd~Ii~aI~k 66 (531)
+.++.|.| + ...-.-...+.+...++ ++.-+--|+.+++|+|... ...+++++.|++
T Consensus 11 ~~~~~i~V~G~VQGVGFR~~v~~~A~~l-gL~G~VrN~~dG~Vei~~eG~~~~l~~f~~~l~~ 72 (98)
T 3trg_A 11 ETCIHVTVSGKVQGVFFRESVRKKAEEL-QLTGWVKNLSHGDVELVACGERDSIMILTEWLWE 72 (98)
T ss_dssp EEEEEEEEEEECSSSCHHHHHHHHHHHT-TCEEEEEECTTSCEEEEEEEEHHHHHHHHHHTTT
T ss_pred hEEEEEEEEEeECCCCccHHHHHHHHHc-CCeEEEEECCCCEEEEEEEECHHHHHHHHHHHHh
Confidence 44556666 4 44544555555544443 6666777888888887643 334555666654
No 103
>2dng_A Eukaryotic translation initiation factor 4H; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=21.72 E-value=2.2e+02 Score=22.53 Aligned_cols=53 Identities=13% Similarity=0.198 Sum_probs=35.3
Q ss_pred eEEEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCC------eEEEEecCCHHHHHHHH
Q 009590 10 QTYVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQG------KVTVSGNVDPSVLIKKL 64 (531)
Q Consensus 10 ~kv~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~g------kVtV~g~v~pd~Ii~aI 64 (531)
...+|-| ++....-...|+..+... +|..+.+-.... -+.|+. .+.++..++|
T Consensus 14 ~~~~l~V~nLp~~~t~~~l~~~F~~~-gi~~v~i~~~~~~g~~~g~afV~f-~~~~~a~~A~ 73 (103)
T 2dng_A 14 PPYTAYVGNLPFNTVQGDIDAIFKDL-SIRSVRLVRDKDTDKFKGFCYVEF-DEVDSLKEAL 73 (103)
T ss_dssp SCEEEEEESCCTTCCHHHHHHHTTTS-CEEEEEEEECSSSCSEEEEEEEEE-SSHHHHHHHG
T ss_pred CCeEEEEeCCCCCCCHHHHHHHHHhC-CceEEEEeecCCCCccceEEEEEE-CCHHHHHHHH
Confidence 3456677 676666677899999998 798888864432 233444 3667777777
No 104
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=21.71 E-value=19 Score=31.94 Aligned_cols=24 Identities=17% Similarity=0.148 Sum_probs=0.0
Q ss_pred CCCCCCCCCccCCcCCCCCCCCCC
Q 009590 193 SDDEFDYDDEYDDEYDDDLDEPLP 216 (531)
Q Consensus 193 dddd~DddddddDd~ddd~dd~~~ 216 (531)
|--|+++|+|||||+|.|+....+
T Consensus 3 d~~d~~~~ee~e~~~d~e~~~~~~ 26 (165)
T 1rk8_A 3 DVLDIDNAEEFEVDEDGDQGIVRL 26 (165)
T ss_dssp ------------------------
T ss_pred cccccccchhhhccccccccchhh
No 105
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.62 E-value=1.1e+02 Score=24.09 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=37.8
Q ss_pred EEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHH
Q 009590 13 VLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAK 66 (531)
Q Consensus 13 ~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~k 66 (531)
+|-| ++.-......|++.+...-.|..+.+.....-+.|+.. +.++..++|+.
T Consensus 17 ~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~-~~~~a~~a~~~ 70 (99)
T 2cpj_A 17 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLE-TRTLAEIAKVE 70 (99)
T ss_dssp EEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETTTTEEEEECS-SSHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHhhcCCeEEEEEecCCCEEEEEEC-CHHHHHHHHHH
Confidence 4666 66656667788999998888999998877777777764 45555556654
No 106
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=21.53 E-value=1.8e+02 Score=23.95 Aligned_cols=53 Identities=9% Similarity=0.125 Sum_probs=27.9
Q ss_pred EEEEE-ccccHHHHHHHHH---HHhCCC--CeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceE
Q 009590 12 YVLKV-NIHCDGCKHKVKK---ILQKID--GVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAE 72 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEK---aL~ki~--GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~ 72 (531)
++|.+ .-+|..|...+.. +..++. +|.-+.|+.. ..+.+.+.+.+++.++...
T Consensus 31 ~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~--------~~~~~~~~~~~~~~~~~~~ 89 (153)
T 2l5o_A 31 TLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQP--------IDPIESVRQYVKDYGLPFT 89 (153)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECT--------TSCHHHHHHHHHHTTCCSE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecC--------CCCHHHHHHHHHHcCCCce
Confidence 34444 6789999765433 222222 2333333221 2356677777777776543
No 107
>2la4_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNA recognition, stress granules, nucleus, RNA-binding, transcription; NMR {Saccharomyces cerevisiae}
Probab=21.29 E-value=2.2e+02 Score=22.33 Aligned_cols=54 Identities=9% Similarity=0.022 Sum_probs=38.4
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHH
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAK 66 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~k 66 (531)
.+|-| ++........|++.+...-.|.++.+....+-+.|+.. +.++..++|+.
T Consensus 28 ~~l~V~nlp~~~~~~~l~~~f~~~G~i~~~~~~~~~g~afV~f~-~~~~A~~Ai~~ 82 (101)
T 2la4_A 28 TTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYD-THEQAAVCIVA 82 (101)
T ss_dssp CEEEEESCCTTCCHHHHHHHHHTTSCCSEEEEETTTTEEEEECS-SHHHHHHHHHH
T ss_pred CEEEEcCCCcccCHHHHHHHHHhCCCEEEEEEecCCCEEEEEEC-CHHHHHHHHHH
Confidence 45667 67666667788999998877888888766676677653 55556666654
No 108
>1sig_A Sigma70, RNA polymerase primary sigma factor; RNA polymerase sigma factor, transcription regulation; 2.60A {Escherichia coli} SCOP: a.177.1.1
Probab=20.77 E-value=30 Score=34.67 Aligned_cols=28 Identities=29% Similarity=0.323 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCccCCcCCCCCCC
Q 009590 186 PDDDEDFSDDEFDYDDEYDDEYDDDLDE 213 (531)
Q Consensus 186 ~~dddd~dddd~DddddddDd~ddd~dd 213 (531)
++.++++++||+|+|+|+|||++++.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (339)
T 1sig_A 74 SELSQEDLDDDEDEDEEDGDDDSADDDN 101 (339)
T ss_dssp CCSCTTTTC-------------------
T ss_pred cccccccccccccccccccccccccccc
No 109
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=20.66 E-value=64 Score=30.56 Aligned_cols=27 Identities=19% Similarity=0.410 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhCC--CCeeEEEeecCCC
Q 009590 21 DGCKHKVKKILQKI--DGVFTTSIDSEQG 47 (531)
Q Consensus 21 ~~Ca~KVEKaL~ki--~GV~svsVdl~~g 47 (531)
..|-+-+|.++.++ +||.++++-+..+
T Consensus 26 gGCFWg~E~~F~~l~g~GV~~t~~GYagG 54 (187)
T 3pim_A 26 CGCFWGTEHMYRKYLNDRIVDCKVGYANG 54 (187)
T ss_dssp SSCHHHHHHHHHHHHGGGSSEEEEEEEEE
T ss_pred cCCchhhHHHHHHhcCCCeEEEEeeecCC
Confidence 45666667777777 7888888766554
No 110
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.59 E-value=1.8e+02 Score=22.70 Aligned_cols=53 Identities=9% Similarity=-0.004 Sum_probs=37.1
Q ss_pred EEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHH
Q 009590 13 VLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAK 66 (531)
Q Consensus 13 ~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~k 66 (531)
+|-| ++........|++.++..-.|..+.+.....-+.|+.. +.++..++|+.
T Consensus 19 ~l~V~nlp~~~t~~~l~~~F~~~G~v~~v~~~~~~g~afV~f~-~~~~A~~A~~~ 72 (97)
T 1why_A 19 RLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYE-SLDAAQAACAK 72 (97)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSSSCCEEEEES-SHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHhcCCeeEEEEeCCCCEEEEEEC-CHHHHHHHHHH
Confidence 3556 56655667789999999888988888766556667653 56666666664
No 111
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=20.55 E-value=3.1e+02 Score=22.16 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=29.4
Q ss_pred EEEEEE-ccccHHHHHHHHHH---HhCC---CCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCceEE
Q 009590 11 TYVLKV-NIHCDGCKHKVKKI---LQKI---DGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHAEL 73 (531)
Q Consensus 11 kv~LkV-gM~C~~Ca~KVEKa---L~ki---~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A~l 73 (531)
.+.|.+ .-+|..|...+... ..++ .+|.-+.| ..+.+.+.+.+.+++.++....
T Consensus 35 ~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v---------~~d~~~~~~~~~~~~~~~~~~~ 95 (148)
T 3fkf_A 35 YLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGI---------SLDIDREAWETAIKKDTLSWDQ 95 (148)
T ss_dssp EEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEE---------ECCSCHHHHHHHHHHTTCCSEE
T ss_pred EEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEE---------ECCCCHHHHHHHHHHcCCCceE
Confidence 344444 67899997655432 2222 12322222 2233567788888887765443
No 112
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=20.43 E-value=2.1e+02 Score=23.81 Aligned_cols=51 Identities=14% Similarity=0.281 Sum_probs=26.6
Q ss_pred EEEEE-ccccHHHHHHHHHH---HhCCC--CeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCce
Q 009590 12 YVLKV-NIHCDGCKHKVKKI---LQKID--GVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHA 71 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKa---L~ki~--GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A 71 (531)
++|.+ .-+|..|...+... ..++. +|.-+.|+ .+.+.+.+.+.+++.++..
T Consensus 37 vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~---------~d~~~~~~~~~~~~~~~~~ 93 (165)
T 3or5_A 37 YIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIA---------VNEQLPNVKNYMKTQGIIY 93 (165)
T ss_dssp EEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEE---------CSCCHHHHHHHHHHHTCCS
T ss_pred EEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEE---------CCCCHHHHHHHHHHcCCCC
Confidence 44444 67999997655332 22221 23333332 2335666677777766543
No 113
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.43 E-value=2.9e+02 Score=21.12 Aligned_cols=52 Identities=12% Similarity=0.176 Sum_probs=36.7
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHH
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAK 66 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~k 66 (531)
.+|-| ++........|++.+...-.|..+.+. ..-+.|+.. +.++..++|+.
T Consensus 9 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~~~--~g~afV~f~-~~~~A~~A~~~ 61 (90)
T 2dnq_A 9 VKLFIGNLPREATEQEIRSLFEQYGKVLECDII--KNYGFVHIE-DKTAAEDAIRN 61 (90)
T ss_dssp EEEEEESCCSSCCHHHHHHHHHTSSCEEEEEEE--TTEEEEEES-SHHHHHHHHHH
T ss_pred eEEEEeCCCCCCCHHHHHHHHHhCCCEEEEEEE--CCEEEEEEC-CHHHHHHHHHH
Confidence 45667 677677778899999998888888776 455666653 56666666653
No 114
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=20.40 E-value=1.9e+02 Score=22.85 Aligned_cols=54 Identities=11% Similarity=0.024 Sum_probs=35.7
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCC-----CeEEEEecCCHHHHHHHHHH
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQ-----GKVTVSGNVDPSVLIKKLAK 66 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~-----gkVtV~g~v~pd~Ii~aI~k 66 (531)
.+|-| ++........|++.+...-.|..+.+-... +-+.|+. .+.++..++|+.
T Consensus 16 ~~l~v~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f-~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 16 RKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKF-SSHTEAQAAIHA 75 (105)
T ss_dssp CEEEEESCCTTCCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEE-SSHHHHHHHHHH
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEe-CCHHHHHHHHHH
Confidence 45667 676666678899999988778888875442 2234444 366666667664
No 115
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=20.34 E-value=1.4e+02 Score=25.48 Aligned_cols=47 Identities=21% Similarity=0.273 Sum_probs=29.7
Q ss_pred ccccHHHHHHHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCCce
Q 009590 17 NIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGKHA 71 (531)
Q Consensus 17 gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy~A 71 (531)
.-.|+.|. ++++.|.. .+|.-..+++.. ...+.++|...+++++..+
T Consensus 10 ~~~C~~c~-ka~~~L~~-~gi~~~~~di~~------~~~~~~eL~~~l~~~g~~~ 56 (120)
T 3fz4_A 10 YPKCSTCR-RAKAELDD-LAWDYDAIDIKK------NPPAASLIRNWLENSGLEL 56 (120)
T ss_dssp CSSCHHHH-HHHHHHHH-HTCCEEEEETTT------SCCCHHHHHHHHHHSCCCG
T ss_pred CCCChHHH-HHHHHHHH-cCCceEEEEecc------CchhHHHHHHHHHHcCCCH
Confidence 45899998 44455543 355444444433 2357888888888888643
No 116
>1x4a_A Splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor)...; structure genomics, SURP domain, splicing factor SF2; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.24 E-value=2.2e+02 Score=22.74 Aligned_cols=55 Identities=15% Similarity=0.134 Sum_probs=37.1
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCCC---eEEEEecCCHHHHHHHHHHc
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQG---KVTVSGNVDPSVLIKKLAKS 67 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~g---kVtV~g~v~pd~Ii~aI~ka 67 (531)
.+|-| ++........|++.+...-.|..+.+..... -+.|+. .+.++..++|+.+
T Consensus 23 ~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~g~afV~f-~~~~~A~~A~~~l 81 (109)
T 1x4a_A 23 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEF-EDPRDAEDAVYGR 81 (109)
T ss_dssp SEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEE-SCHHHHHHHHHHH
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEE-CCHHHHHHHHHHc
Confidence 34667 6766667788999999988888888854432 445655 3666666777543
No 117
>1h2v_Z 20 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: d.58.7.1 PDB: 1h2u_X* 1h2t_Z 1n52_B* 1n54_B 3fex_B 3fey_B 1h6k_X
Probab=20.12 E-value=2e+02 Score=24.67 Aligned_cols=55 Identities=9% Similarity=0.030 Sum_probs=36.2
Q ss_pred EEEEE-ccccHHHHHHHHHHHhCCCCeeEEEeecCC--C----eEEEEecCCHHHHHHHHHHc
Q 009590 12 YVLKV-NIHCDGCKHKVKKILQKIDGVFTTSIDSEQ--G----KVTVSGNVDPSVLIKKLAKS 67 (531)
Q Consensus 12 v~LkV-gM~C~~Ca~KVEKaL~ki~GV~svsVdl~~--g----kVtV~g~v~pd~Ii~aI~ka 67 (531)
.+|-| +|........|++++...--|..|.+-... . -+.|+. .+.++..++|+.+
T Consensus 40 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f-~~~~~A~~Ai~~l 101 (156)
T 1h2v_Z 40 CTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEY-YSRADAENAMRYI 101 (156)
T ss_dssp CEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEE-SSHHHHHHHHHHT
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEE-CCHHHHHHHHHHh
Confidence 45667 676556677899999988788888875432 2 223443 4677777777753
No 118
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=20.02 E-value=2.6e+02 Score=23.29 Aligned_cols=43 Identities=16% Similarity=0.195 Sum_probs=29.7
Q ss_pred HHHHHHhCCCCeeEEEeecCCCeEEEEecCCHHHHHHHHHHcCC
Q 009590 26 KVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVLIKKLAKSGK 69 (531)
Q Consensus 26 KVEKaL~ki~GV~svsVdl~~gkVtV~g~v~pd~Ii~aI~kaGy 69 (531)
++-+.|....||..++++.++++|+|.+ .+.+.+.++++.+-.
T Consensus 35 k~Ik~I~e~tGv~~IdI~eddG~V~I~g-~~~ea~~~A~~~I~~ 77 (91)
T 2cpq_A 35 SNIQQARKVPGVTAIELDEDTGTFRIYG-ESADAVKKARGFLEF 77 (91)
T ss_dssp HHHHHHHTSTTEEEEEEETTTTEEEEEE-SSHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCeEEEEEcCCCEEEEEE-CCHHHHHHHHHHHHh
Confidence 3445566668987788887679999877 466776666665443
Done!