Query 009592
Match_columns 531
No_of_seqs 351 out of 2915
Neff 8.3
Searched_HMMs 46136
Date Thu Mar 28 14:58:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009592.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009592hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd04852 Peptidases_S8_3 Peptid 100.0 1.1E-43 2.4E-48 359.9 19.2 288 105-422 1-299 (307)
2 KOG1153 Subtilisin-related pro 100.0 3.8E-41 8.3E-46 333.2 18.6 327 20-423 77-444 (501)
3 PTZ00262 subtilisin-like prote 100.0 2.5E-41 5.4E-46 357.8 14.8 243 131-413 302-573 (639)
4 cd07479 Peptidases_S8_SKI-1_li 100.0 9E-40 1.9E-44 321.8 11.6 214 136-414 1-230 (255)
5 cd07476 Peptidases_S8_thiazoli 100.0 8.8E-39 1.9E-43 316.3 14.9 221 135-412 2-227 (267)
6 cd07483 Peptidases_S8_Subtilis 100.0 2.6E-38 5.6E-43 317.6 12.8 254 143-422 1-283 (291)
7 cd07491 Peptidases_S8_7 Peptid 100.0 9.5E-38 2.1E-42 305.3 12.0 216 142-411 2-227 (247)
8 cd05561 Peptidases_S8_4 Peptid 100.0 1.5E-37 3.3E-42 303.1 10.6 215 145-423 1-218 (239)
9 cd07485 Peptidases_S8_Fervidol 100.0 1.5E-36 3.3E-41 302.5 15.2 239 134-412 1-255 (273)
10 cd07484 Peptidases_S8_Thermita 100.0 2.1E-36 4.5E-41 299.6 14.9 231 131-422 17-249 (260)
11 cd07497 Peptidases_S8_14 Pepti 100.0 2.2E-36 4.8E-41 304.5 14.9 238 142-412 1-287 (311)
12 cd07475 Peptidases_S8_C5a_Pept 100.0 9.8E-36 2.1E-40 307.0 15.5 252 134-412 1-290 (346)
13 cd04077 Peptidases_S8_PCSK9_Pr 100.0 5.5E-36 1.2E-40 295.7 11.6 220 135-423 17-247 (255)
14 cd07496 Peptidases_S8_13 Pepti 100.0 1.1E-35 2.4E-40 298.2 12.4 185 217-422 66-279 (285)
15 cd07493 Peptidases_S8_9 Peptid 100.0 1.8E-35 4E-40 292.9 13.5 229 144-422 1-253 (261)
16 cd07489 Peptidases_S8_5 Peptid 100.0 3.6E-35 7.9E-40 298.3 14.6 232 132-413 2-247 (312)
17 cd07481 Peptidases_S8_Bacillop 100.0 3.7E-35 8E-40 291.2 14.1 221 142-413 1-244 (264)
18 cd07498 Peptidases_S8_15 Pepti 100.0 4.2E-35 9.2E-40 287.1 12.1 223 145-422 1-236 (242)
19 cd04843 Peptidases_S8_11 Pepti 100.0 4.3E-35 9.4E-40 291.1 11.7 212 131-410 3-251 (277)
20 cd07490 Peptidases_S8_6 Peptid 100.0 2.2E-34 4.8E-39 284.1 13.5 220 144-421 1-245 (254)
21 cd05562 Peptidases_S53_like Pe 100.0 1.7E-34 3.6E-39 286.6 11.3 207 139-413 1-233 (275)
22 cd07487 Peptidases_S8_1 Peptid 100.0 1.5E-33 3.2E-38 279.6 15.0 219 142-413 1-246 (264)
23 cd07477 Peptidases_S8_Subtilis 100.0 9.7E-34 2.1E-38 275.0 13.0 210 144-414 1-214 (229)
24 cd07480 Peptidases_S8_12 Pepti 100.0 1E-33 2.2E-38 285.6 12.3 219 138-415 3-256 (297)
25 cd07473 Peptidases_S8_Subtilis 100.0 1.5E-33 3.3E-38 278.9 12.6 240 143-422 2-251 (259)
26 cd04857 Peptidases_S8_Tripepti 100.0 5.2E-33 1.1E-37 285.7 16.4 178 219-412 182-387 (412)
27 cd07494 Peptidases_S8_10 Pepti 100.0 3.2E-33 6.9E-38 280.8 14.0 210 131-413 9-265 (298)
28 cd04842 Peptidases_S8_Kp43_pro 100.0 5.4E-33 1.2E-37 279.9 14.2 229 138-413 2-267 (293)
29 cd07482 Peptidases_S8_Lantibio 100.0 6.1E-33 1.3E-37 279.7 14.1 224 144-414 1-278 (294)
30 cd07478 Peptidases_S8_CspA-lik 100.0 4.9E-33 1.1E-37 294.0 12.0 258 140-413 1-416 (455)
31 cd07474 Peptidases_S8_subtilis 100.0 1.4E-32 3E-37 277.3 14.5 241 142-422 1-262 (295)
32 cd04059 Peptidases_S8_Protein_ 100.0 1.2E-32 2.6E-37 278.0 13.3 236 131-422 27-289 (297)
33 cd07492 Peptidases_S8_8 Peptid 100.0 7.3E-33 1.6E-37 267.7 10.5 210 144-422 1-214 (222)
34 cd04847 Peptidases_S8_Subtilis 100.0 6.9E-32 1.5E-36 271.6 9.5 216 146-414 2-274 (291)
35 cd04848 Peptidases_S8_Autotran 100.0 4.7E-31 1E-35 261.7 12.3 229 141-422 1-259 (267)
36 KOG4266 Subtilisin kexin isozy 100.0 8.1E-28 1.8E-32 245.1 16.0 314 23-412 49-420 (1033)
37 PF00082 Peptidase_S8: Subtila 99.9 2E-28 4.3E-33 245.2 9.5 218 146-412 1-237 (282)
38 cd00306 Peptidases_S8_S53 Pept 99.9 2E-25 4.4E-30 216.7 14.2 178 217-414 39-226 (241)
39 cd07488 Peptidases_S8_2 Peptid 99.9 4.8E-26 1E-30 222.1 6.5 167 218-414 33-225 (247)
40 KOG3526 Subtilisin-like propro 99.8 2.4E-20 5.1E-25 181.3 17.1 361 4-430 9-419 (629)
41 COG1404 AprE Subtilisin-like s 99.8 2.1E-20 4.5E-25 201.1 16.2 227 133-414 130-379 (508)
42 KOG1114 Tripeptidyl peptidase 99.8 2.4E-20 5.3E-25 198.6 11.9 177 221-412 309-512 (1304)
43 cd02133 PA_C5a_like PA_C5a_lik 99.7 9.1E-17 2E-21 144.1 11.1 105 411-520 36-141 (143)
44 cd02129 PA_hSPPL_like PA_hSPPL 99.6 1.6E-15 3.6E-20 129.5 8.5 93 388-490 20-116 (120)
45 cd02122 PA_GRAIL_like PA _GRAI 99.6 7.8E-15 1.7E-19 129.7 9.8 89 408-496 44-138 (138)
46 cd02127 PA_hPAP21_like PA_hPAP 99.6 8.3E-15 1.8E-19 126.1 9.7 89 408-497 21-117 (118)
47 cd02120 PA_subtilisin_like PA_ 99.6 3E-14 6.5E-19 125.0 12.8 123 368-495 2-125 (126)
48 cd04816 PA_SaNapH_like PA_SaNa 99.5 1.7E-14 3.6E-19 125.7 9.1 88 409-496 30-122 (122)
49 cd02126 PA_EDEM3_like PA_EDEM3 99.5 4.4E-14 9.6E-19 123.4 9.2 87 408-495 27-125 (126)
50 cd02132 PA_GO-like PA_GO-like: 99.5 7.2E-14 1.6E-18 124.2 9.0 85 408-495 48-138 (139)
51 cd02125 PA_VSR PA_VSR: Proteas 99.5 9.7E-14 2.1E-18 121.0 9.2 88 409-496 23-127 (127)
52 cd02130 PA_ScAPY_like PA_ScAPY 99.5 1.2E-13 2.6E-18 120.4 9.3 87 409-496 32-122 (122)
53 cd04818 PA_subtilisin_1 PA_sub 99.5 1.7E-13 3.6E-18 118.8 10.0 90 406-496 25-118 (118)
54 cd02124 PA_PoS1_like PA_PoS1_l 99.5 1.6E-13 3.5E-18 120.0 9.8 101 390-496 28-129 (129)
55 cd04817 PA_VapT_like PA_VapT_l 99.4 2.5E-13 5.3E-18 119.5 8.5 76 415-490 49-135 (139)
56 cd04813 PA_1 PA_1: Protease-as 99.4 5.8E-13 1.3E-17 114.4 8.8 79 409-489 28-112 (117)
57 PF02225 PA: PA domain; Inter 99.4 2.9E-13 6.3E-18 113.8 5.0 78 409-486 20-101 (101)
58 cd02123 PA_C_RZF_like PA_C-RZF 99.4 9.4E-13 2E-17 118.9 8.5 84 408-491 50-142 (153)
59 cd00538 PA PA: Protease-associ 99.4 2.1E-12 4.7E-17 113.0 8.9 87 409-495 31-125 (126)
60 cd04819 PA_2 PA_2: Protease-as 99.2 6.1E-11 1.3E-15 103.9 10.4 80 415-494 37-125 (127)
61 cd04056 Peptidases_S53 Peptida 99.2 9.5E-11 2.1E-15 121.3 9.8 103 250-364 82-200 (361)
62 cd04815 PA_M28_2 PA_M28_2: Pro 99.0 1.2E-09 2.5E-14 96.6 8.1 81 416-496 33-134 (134)
63 PF05922 Inhibitor_I9: Peptida 98.9 3E-09 6.6E-14 85.6 7.8 77 25-107 1-81 (82)
64 cd02128 PA_TfR PA_TfR: Proteas 98.6 8.1E-08 1.8E-12 88.2 6.0 72 418-489 51-156 (183)
65 KOG2442 Uncharacterized conser 98.4 5.9E-07 1.3E-11 91.7 8.2 87 410-499 86-178 (541)
66 KOG3920 Uncharacterized conser 98.2 7.3E-07 1.6E-11 77.5 2.8 91 408-499 74-174 (193)
67 cd04814 PA_M28_1 PA_M28_1: Pro 98.2 4.8E-06 1E-10 73.7 7.8 77 409-485 34-134 (142)
68 cd04822 PA_M28_1_3 PA_M28_1_3: 98.2 6.2E-06 1.4E-10 73.8 8.1 80 409-488 34-134 (151)
69 cd02121 PA_GCPII_like PA_GCPII 98.1 3.7E-06 8.1E-11 80.0 5.6 72 418-489 67-190 (220)
70 KOG4628 Predicted E3 ubiquitin 98.1 8.4E-06 1.8E-10 81.8 7.3 81 409-489 63-150 (348)
71 cd04820 PA_M28_1_1 PA_M28_1_1: 98.0 5.8E-06 1.3E-10 72.7 4.9 49 409-457 36-96 (137)
72 cd02131 PA_hNAALADL2_like PA_h 98.0 1E-05 2.2E-10 71.5 6.4 68 419-486 37-137 (153)
73 KOG3525 Subtilisin-like propro 97.5 0.00023 5E-09 75.0 8.0 180 131-363 21-213 (431)
74 COG4934 Predicted protease [Po 96.3 0.011 2.3E-07 68.0 8.0 95 251-357 288-395 (1174)
75 cd04821 PA_M28_1_2 PA_M28_1_2: 96.1 0.013 2.7E-07 53.1 5.8 71 415-485 42-150 (157)
76 cd07497 Peptidases_S8_14 Pepti 88.5 0.24 5.2E-06 50.3 1.9 22 508-531 218-239 (311)
77 KOG1114 Tripeptidyl peptidase 86.1 0.52 1.1E-05 53.0 2.7 24 139-162 77-100 (1304)
78 PF08260 Kinin: Insect kinin p 86.1 0.32 6.9E-06 20.9 0.4 6 513-518 3-8 (8)
79 cd07478 Peptidases_S8_CspA-lik 80.0 0.93 2E-05 48.6 1.7 23 507-531 355-377 (455)
80 cd04857 Peptidases_S8_Tripepti 74.2 1.5 3.3E-05 46.1 1.3 48 133-201 11-60 (412)
81 cd04847 Peptidases_S8_Subtilis 67.4 2.7 5.8E-05 42.1 1.3 17 513-531 200-216 (291)
82 KOG2195 Transferrin receptor a 64.2 6 0.00013 44.5 3.3 38 420-457 182-219 (702)
83 cd07475 Peptidases_S8_C5a_Pept 63.8 4.2 9.2E-05 41.7 2.0 25 505-531 228-252 (346)
84 cd07493 Peptidases_S8_9 Peptid 48.2 11 0.00025 36.8 2.0 22 508-531 183-204 (261)
85 cd04842 Peptidases_S8_Kp43_pro 46.1 11 0.00024 37.5 1.6 22 508-531 198-219 (293)
86 cd07487 Peptidases_S8_1 Peptid 43.6 12 0.00027 36.4 1.5 21 509-531 178-198 (264)
87 PF08139 LPAM_1: Prokaryotic m 43.2 16 0.00035 22.1 1.3 16 2-17 8-23 (25)
88 PF07172 GRP: Glycine rich pro 41.1 21 0.00045 29.4 2.1 12 1-12 2-13 (95)
89 KOG4266 Subtilisin kexin isozy 38.3 15 0.00032 40.0 1.1 25 507-531 354-382 (1033)
90 PF02402 Lysis_col: Lysis prot 36.2 15 0.00032 25.3 0.5 21 1-21 1-21 (46)
91 cd07481 Peptidases_S8_Bacillop 31.0 27 0.00058 34.3 1.6 22 508-531 184-205 (264)
92 COG5567 Predicted small peripl 30.8 54 0.0012 23.8 2.6 25 1-25 1-25 (58)
93 cd07479 Peptidases_S8_SKI-1_li 29.6 29 0.00064 33.9 1.5 24 508-531 163-190 (255)
94 PF08194 DIM: DIM protein; In 28.3 91 0.002 20.7 3.1 6 23-28 23-28 (36)
95 TIGR02052 MerP mercuric transp 28.3 52 0.0011 25.3 2.6 20 1-20 1-20 (92)
96 PRK13883 conjugal transfer pro 28.0 1.1E+02 0.0025 27.4 4.8 26 1-27 1-26 (151)
97 PF03032 Brevenin: Brevenin/es 26.7 39 0.00084 23.8 1.3 19 1-19 3-21 (46)
98 KOG2018 Predicted dinucleotide 25.4 1.3E+02 0.0029 30.3 5.1 52 285-337 179-246 (430)
99 PF08821 CGGC: CGGC domain; I 24.8 2.6E+02 0.0056 23.5 6.2 46 252-308 31-77 (107)
100 PF13956 Ibs_toxin: Toxin Ibs, 23.6 48 0.001 18.3 1.0 9 1-9 1-9 (19)
101 cd07489 Peptidases_S8_5 Peptid 21.1 50 0.0011 33.2 1.4 18 512-531 189-206 (312)
102 COG4882 Predicted aminopeptida 20.9 2.3E+02 0.0049 29.3 5.8 64 419-482 86-159 (486)
No 1
>cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.1e-43 Score=359.86 Aligned_cols=288 Identities=46% Similarity=0.759 Sum_probs=230.8
Q ss_pred ccccCCCCccccccchhhhccccccccchhhhcccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcC
Q 009592 105 YSLQTTRSWEFVGLDEVAKQNWNHFNMGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFN 184 (531)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~ 184 (531)
++++++++++++++... |. ..+|..+++|+||+|||||||||++||+|++....+++..|.+.|..+..++
T Consensus 1 ~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~G~gv~VaViDtGid~~hp~f~~~~~~~~~~~~~~~~~~~~~~~ 71 (307)
T cd04852 1 YQLHTTRSPDFLGLPGA----WG-----GSLLGAANAGEGIIIGVLDTGIWPEHPSFADVGGGPYPHTWPGDCVTGEDFN 71 (307)
T ss_pred CCccccCCHHHcCCCCC----CC-----cccccccCCCCccEEEEEeCCCCCCCcCcccCCCCCCCCCCCCcccCCCCcC
Confidence 35778888999988776 33 2368889999999999999999999999999888888999999999888887
Q ss_pred cccCCceeeeEEecccccccccCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEee
Q 009592 185 SSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYK 264 (531)
Q Consensus 185 ~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~k 264 (531)
...+++|+++.++|.++++.... .....+...+.|..||||||||||||+...+.... +...+.+.||||+|+|+.+|
T Consensus 72 ~~~~~~ki~g~~~~~~~~~~~~~-~~~~~~~~~~~d~~gHGT~VAgiiag~~~~~~~~~-~~~~~~~~GvAP~a~l~~~k 149 (307)
T cd04852 72 PFSCNNKLIGARYFSDGYDAYGG-FNSDGEYRSPRDYDGHGTHTASTAAGNVVVNASVG-GFAFGTASGVAPRARIAVYK 149 (307)
T ss_pred ccCcCCeEEEEEEcccchhhccC-cccccCCCCCccCCCCchhhhhhhcCCCccccccc-ccccccEEEECCCCeEEEEE
Confidence 77899999999999887654322 11223345778899999999999999865543333 44556678999999999999
Q ss_pred eecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCC
Q 009592 265 ACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSS 344 (531)
Q Consensus 265 v~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~ 344 (531)
+++..+ .+..+++++||+||++++++|||||||... .....+.+..++..+.++|+++|+||||+|+...+
T Consensus 150 v~~~~~--------~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~-~~~~~~~~~~~~~~a~~~gilvV~aAGN~g~~~~~ 220 (307)
T cd04852 150 VCWPDG--------GCFGSDILAAIDQAIADGVDVISYSIGGGS-PDPYEDPIAIAFLHAVEAGIFVAASAGNSGPGAST 220 (307)
T ss_pred EecCCC--------CccHHHHHHHHHHHHHcCCCEEEeCCCCCC-CCcccCHHHHHHHHHHhCCCEEEEECCCCCCCCCc
Confidence 999854 788999999999999999999999999943 24566778888889999999999999999988778
Q ss_pred CCCCCCceeeeeccccCCCcccceEeCCcceeeeeeeccCCC----------CCCceeEEecccCCCCcCccccCCCCCC
Q 009592 345 LSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNL----------KKMHPLVYAADVVVPGVHQNETNQCLPG 414 (531)
Q Consensus 345 ~~~~~~~vitVgA~~~~~~~~~~~~~g~~~~~~G~~i~~~~~----------~~~~~~~~gts~a~p~v~~~~a~~c~~~ 414 (531)
.++.+|++|+|||++ .......||..+.+... ...|..++|||||+|+|+|..+++.+..
T Consensus 221 ~~~~~~~vi~Vga~~----------~~~di~apG~~i~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aALl~~~~ 290 (307)
T cd04852 221 VPNVAPWVTTVAAST----------LKPDIAAPGVDILAAWTPEGADPGDARGEDFAFISGTSMASPHVAGVAALLKSAH 290 (307)
T ss_pred ccCCCCCeEEEEecc----------CccceeeccCceeecccCccccccCCCCCcEEEeCcHHHHHHHHHHHHHHHHHHC
Confidence 888899999999987 11122236666544332 4778999999999999999998776532
Q ss_pred -CCCCCccc
Q 009592 415 -SLTPEKVK 422 (531)
Q Consensus 415 -~~~~~~~~ 422 (531)
.+++.+++
T Consensus 291 p~~t~~~v~ 299 (307)
T cd04852 291 PDWSPAAIK 299 (307)
T ss_pred CCCCHHHHH
Confidence 34554444
No 2
>KOG1153 consensus Subtilisin-related protease/Vacuolar protease B [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.8e-41 Score=333.18 Aligned_cols=327 Identities=17% Similarity=0.226 Sum_probs=254.8
Q ss_pred ccCCceEEEEecCCCCCCccchhhHHHHHHHHHHhhcchhhhc--c----------------ceEEEee---eeeeeEEE
Q 009592 20 QKQKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEAR--A----------------SHLYSYK---HSINGFSA 78 (531)
Q Consensus 20 ~~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~----------------~~~~~~~---~~~~g~s~ 78 (531)
...+.+|||.|++.. .++..+.|.++++...+...... . .+...|. .+|+|+.-
T Consensus 77 ~~~~~~YiV~f~~~~-----~q~~~s~~~~~~~~~h~~s~~~~s~~~~f~~~d~~~s~~~~~~i~~~f~i~~~~~~~y~~ 151 (501)
T KOG1153|consen 77 EALPSRYIVVFKPDA-----SQQKISAHNRWVQQSHEVSSGKLSSEDAFYVKDTSDSKSTFGGIKNVFDIGGRVFRGYTG 151 (501)
T ss_pred cccccceEEEeCCCc-----cHHHHHhhhHHHHHHhhhhhccccccceeEeeccccchhhhcccccccccccchhhcccc
Confidence 445789999999654 55667778888776654322110 0 1223333 27888999
Q ss_pred EeCHHHHHHhhcCCCeEEEEeCCCccccccC-----CCCccccccchhhhccccccc-cchhhhcccCCCCceEEEEeec
Q 009592 79 VLTPDEAARLSELEEVVSVYPSHPEKYSLQT-----TRSWEFVGLDEVAKQNWNHFN-MGQDLLSKARYGQDVIVGLVDN 152 (531)
Q Consensus 79 ~~~~~~~~~l~~~p~V~~v~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~gv~VaViDt 152 (531)
.++.+.+..+++.|-++.++++. .....+ .|....|++.++..+.....- -...+++ -..|+||...|+||
T Consensus 152 ~ft~~~v~~i~~~p~~~~ve~~~--~v~~~~~~~i~~Q~~APwgLaRvsh~~~~~y~~~~~Y~Y~-~~aG~gvtaYv~DT 228 (501)
T KOG1153|consen 152 YFTGESVCSIRSDPLIKAVEKDS--VVEVDKISTIMLQNNAPWGLARVSHREKLKYDSWGNYVYE-IDAGKGVTAYVLDT 228 (501)
T ss_pred ccccceeeeeccCcceeeccccc--ccccccccceecccCCchhhhhhcccccccccchheEEee-cccCCCeEEEEecc
Confidence 99999999999999999999998 665543 456667898887443311000 0022333 34799999999999
Q ss_pred ccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCCCCCCccccccc
Q 009592 153 GVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTV 232 (531)
Q Consensus 153 Gid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGii 232 (531)
||+..||||.++.+ | |.|. . ......|++||||||||+|
T Consensus 229 GVni~H~dFegRa~------w-Ga~i--------------------~--------------~~~~~~D~nGHGTH~AG~I 267 (501)
T KOG1153|consen 229 GVNIEHPDFEGRAI------W-GATI--------------------P--------------PKDGDEDCNGHGTHVAGLI 267 (501)
T ss_pred ccccccccccccee------c-cccc--------------------C--------------CCCcccccCCCcceeeeee
Confidence 99999999987642 2 1111 0 0013458999999999999
Q ss_pred ccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHc---------CCcEEEEe
Q 009592 233 AGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD---------GVHVLSIS 303 (531)
Q Consensus 233 ag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~---------g~~VIn~S 303 (531)
++.. .|||.+++|+++||++++| ++..+++++++||+++. +..|.|||
T Consensus 268 ~sKt---------------~GvAK~s~lvaVKVl~~dG--------sGt~Sdvi~GvE~~~k~h~~~k~~~~k~sv~NlS 324 (501)
T KOG1153|consen 268 GSKT---------------FGVAKNSNLVAVKVLRSDG--------SGTVSDVIKGVEFVVKHHEKKKKKEGKKSVANLS 324 (501)
T ss_pred eccc---------------cccccccceEEEEEeccCC--------cEeHHHHHhHHHHHHHHhhhhhcccCCCeEEEEe
Confidence 9872 4999999999999999998 89999999999999986 57899999
Q ss_pred ccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC-CCCceeeeeccccCCCcccceEeCCccee--eeee
Q 009592 304 IGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSN-LAPWLITVGAGSLDRDFVGPVVLGTGMEI--IGKT 380 (531)
Q Consensus 304 ~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~-~~~~vitVgA~~~~~~~~~~~~~g~~~~~--~G~~ 380 (531)
+|+. ..-+++.|+++|.+.||.+++||||+..++|..++ .++++|||||++..++++.|||||+.+++ ||..
T Consensus 325 lGg~-----~S~aLn~AV~~A~~~Gi~fa~AAGNe~eDAC~~SPass~~aITVGAst~~D~iA~FSN~G~CVdiFAPGv~ 399 (501)
T KOG1153|consen 325 LGGF-----RSAALNMAVNAASERGIHFAVAAGNEHEDACNSSPASSKKAITVGASTKNDTIAFFSNWGKCVDIFAPGVN 399 (501)
T ss_pred cCCc-----ccHHHHHHHHHHhhcCeEEEEcCCCcchhhhccCcccccccEEecccccccchhhhcCccceeeeecCchh
Confidence 9992 33678888899999999999999999999887664 78999999999999999999999999998 9999
Q ss_pred eccCCCC--CCceeEEecccCCCCcCccccCCCCCCCCCCCcccc
Q 009592 381 VTPYNLK--KMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKG 423 (531)
Q Consensus 381 i~~~~~~--~~~~~~~gts~a~p~v~~~~a~~c~~~~~~~~~~~g 423 (531)
|.+++.+ ..-.+++||||++|||+|..++.....++++..+..
T Consensus 400 IlSs~iGs~~at~ilSGTSMasPhvaG~aAy~ls~~~~~~~~f~n 444 (501)
T KOG1153|consen 400 ILSSWIGSNNATAILSGTSMASPHVAGLAAYFLSLGPLPDSSFAN 444 (501)
T ss_pred hhhhhhcCccchheeecccccCcchhhhHHHhhhcCCCChHHhhh
Confidence 9988873 467789999999999999999887766665555554
No 3
>PTZ00262 subtilisin-like protease; Provisional
Probab=100.00 E-value=2.5e-41 Score=357.79 Aligned_cols=243 Identities=16% Similarity=0.109 Sum_probs=178.2
Q ss_pred cchhhhcc--cCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCcee--eeEEeccccccccc
Q 009592 131 MGQDLLSK--ARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKI--IGARYYLKGFEQLY 206 (531)
Q Consensus 131 ~~~~~~~~--~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki--~~~~~~~~~~~~~~ 206 (531)
+++++|+. +.+|+||+|||||||||++||||.++..... ....|.. .++. ..|..+ +.+++|.+
T Consensus 302 ~~~~aw~~~~~~~g~gV~VAVIDTGID~~HPDL~~ni~~n~-~el~Grd----giDd-D~nG~vdd~~G~nfVd------ 369 (639)
T PTZ00262 302 RLDETQELIEPHEVNDTNICVIDSGIDYNHPDLHDNIDVNV-KELHGRK----GIDD-DNNGNVDDEYGANFVN------ 369 (639)
T ss_pred CchHHHHHhhccCCCCcEEEEEccCCCCCChhhhhhccccc-ccccCcc----cccc-ccCCcccccccccccC------
Confidence 55777764 6789999999999999999999986531110 0011100 0000 000000 11223322
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHH
Q 009592 207 GPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADML 286 (531)
Q Consensus 207 ~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~ 286 (531)
+..+|.|.+||||||||||||. +++...+.||||+|+|+++|+|+..+ .+..++++
T Consensus 370 -------~~~~P~D~~GHGTHVAGIIAA~---------gnN~~Gi~GVAP~AkLi~vKVld~~G--------~G~~sdI~ 425 (639)
T PTZ00262 370 -------NDGGPMDDNYHGTHVSGIISAI---------GNNNIGIVGVDKRSKLIICKALDSHK--------LGRLGDMF 425 (639)
T ss_pred -------CCCCCCCCCCcchHHHHHHhcc---------ccCCCceeeeecccccceEEEecCCC--------CccHHHHH
Confidence 1235678999999999999998 33333467999999999999998776 68899999
Q ss_pred HHHHHHHHcCCcEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC--------------CCCC----C
Q 009592 287 AAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS--------------SLSN----L 348 (531)
Q Consensus 287 ~ai~~a~~~g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~--------------~~~~----~ 348 (531)
+||+||++.|++|||||||+.. ....+..|+.+|.++|++||+||||+|.... .+++ .
T Consensus 426 ~AI~yA~~~GA~VINmSlG~~~----~s~~l~~AV~~A~~kGILVVAAAGN~g~~~~s~p~~~~~d~~~~~~YPaa~s~~ 501 (639)
T PTZ00262 426 KCFDYCISREAHMINGSFSFDE----YSGIFNESVKYLEEKGILFVVSASNCSHTKESKPDIPKCDLDVNKVYPPILSKK 501 (639)
T ss_pred HHHHHHHHCCCCEEEeccccCC----ccHHHHHHHHHHHHCCCEEEEeCCCCCCCcccccccccccccccccCChhhhcc
Confidence 9999999999999999999832 3356778889999999999999999986421 1222 3
Q ss_pred CCceeeeeccccCCC----cccceEeC-Cccee--eeeeeccCCCCCCceeEEecccCCCCcCccccCCCCC
Q 009592 349 APWLITVGAGSLDRD----FVGPVVLG-TGMEI--IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLP 413 (531)
Q Consensus 349 ~~~vitVgA~~~~~~----~~~~~~~g-~~~~~--~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~ 413 (531)
.++||+|||++.+.. +..+++|+ ..+++ ||..|+++.+++.|..++|||||+|||+|.+|++.+.
T Consensus 502 ~~nVIaVGAv~~d~~~~~s~s~~Snyg~~~VDIaAPG~dI~St~p~g~Y~~~SGTSmAAP~VAGvAALLlS~ 573 (639)
T PTZ00262 502 LRNVITVSNLIKDKNNQYSLSPNSFYSAKYCQLAAPGTNIYSTFPKNSYRKLNGTSMAAPHVAAIASLILSI 573 (639)
T ss_pred CCCEEEEeeccCCCCCcccccccccCCCCcceEEeCCCCeeeccCCCceeecCCCchhHHHHHHHHHHHHhh
Confidence 589999999976432 23455666 34555 9999999999899999999999999999999877653
No 4
>cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins. SKI-1 (type I membrane-bound subtilisin-kexin-isoenzyme) proteins are secretory Ca2+-dependent serine proteinases cleave at nonbasic residues: Thr, Leu, and Lys. SKI-1s play a critical role in the regulation of the synthesis and metabolism of cholesterol and fatty acid metabolism. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme tem
Probab=100.00 E-value=9e-40 Score=321.79 Aligned_cols=214 Identities=22% Similarity=0.233 Sum_probs=173.4
Q ss_pred hcccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCC
Q 009592 136 LSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDD 215 (531)
Q Consensus 136 ~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~ 215 (531)
|+.+++|+||+|||||||||.+||+|.+.. ...+|.. .
T Consensus 1 W~~g~tG~gv~VaviDsGv~~~hp~l~~~~----------------------------~~~~~~~--------------~ 38 (255)
T cd07479 1 WQLGYTGAGVKVAVFDTGLAKDHPHFRNVK----------------------------ERTNWTN--------------E 38 (255)
T ss_pred CCCCCCCCCCEEEEEeCCCCCCCcchhccc----------------------------cccccCC--------------C
Confidence 889999999999999999999999996321 0011111 1
Q ss_pred CCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHc
Q 009592 216 RSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD 295 (531)
Q Consensus 216 ~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~ 295 (531)
....|..||||||||||+|+ +. ...||||+|+|+.+|+|.+.+ ....+.++++++|+++.
T Consensus 39 ~~~~d~~gHGT~VAGiIa~~---------~~---~~~GvAp~a~l~~~~v~~~~~--------~~~~~~~~~a~~~a~~~ 98 (255)
T cd07479 39 KTLDDGLGHGTFVAGVIASS---------RE---QCLGFAPDAEIYIFRVFTNNQ--------VSYTSWFLDAFNYAILT 98 (255)
T ss_pred CCCCCCCCcHHHHHHHHHcc---------CC---CceeECCCCEEEEEEeecCCC--------CchHHHHHHHHHhhhhc
Confidence 23456789999999999987 21 247999999999999998775 56778899999999999
Q ss_pred CCcEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCC--CCCCCCceeeeeccccCCCcccceEeCCc
Q 009592 296 GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSS--LSNLAPWLITVGAGSLDRDFVGPVVLGTG 373 (531)
Q Consensus 296 g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~--~~~~~~~vitVgA~~~~~~~~~~~~~g~~ 373 (531)
++||||||||... +...++..++.++.++|++||+||||+|+...+ .+...++||+|||++.++.++.||++|..
T Consensus 99 ~~~Vin~S~G~~~---~~~~~~~~~~~~~~~~gi~vV~aaGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g~~ 175 (255)
T cd07479 99 KIDVLNLSIGGPD---FMDKPFVDKVWELTANNIIMVSAIGNDGPLYGTLNNPADQMDVIGVGGIDFDDNIARFSSRGMT 175 (255)
T ss_pred CCCEEEeeccCCC---CCCcHHHHHHHHHHHCCcEEEEEcCCCCCCcccccCcccCCCceEEeeeccCCccccccCCCCC
Confidence 9999999999832 234556667778889999999999999975443 45567999999999999999999998742
Q ss_pred ------------cee--eeeeeccCCCCCCceeEEecccCCCCcCccccCCCCCC
Q 009592 374 ------------MEI--IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPG 414 (531)
Q Consensus 374 ------------~~~--~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~ 414 (531)
.++ ||..+.++...+.|..++|||||+|+|+|..|++.+..
T Consensus 176 ~~~~p~~~g~~~~di~apG~~i~~~~~~~~~~~~sGTS~AaP~VaG~aAll~s~~ 230 (255)
T cd07479 176 TWELPGGYGRVKPDIVTYGSGVYGSKLKGGCRALSGTSVASPVVAGAVALLLSTV 230 (255)
T ss_pred cccccCCCCCcCccEEecCCCeeccccCCCeEEeccHHHHHHHHHHHHHHHHHhC
Confidence 234 89998887777889999999999999999998886643
No 5
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases. Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution).
Probab=100.00 E-value=8.8e-39 Score=316.30 Aligned_cols=221 Identities=21% Similarity=0.197 Sum_probs=180.9
Q ss_pred hhcccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCC
Q 009592 135 LLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATED 214 (531)
Q Consensus 135 ~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~ 214 (531)
+|+.+++|+||+|||||+|||.+||+|++..+.+. ..+.. .
T Consensus 2 lw~~g~~g~gV~VaViDsGid~~hp~l~~~~~~~~--------------------------~~~~~-------------~ 42 (267)
T cd07476 2 LFAFGGGDPRITIAILDGPVDRTHPCFRGANLTPL--------------------------FTYAA-------------A 42 (267)
T ss_pred ceeccCCCCCeEEEEeCCCcCCCChhhCCCccccc--------------------------cCccc-------------c
Confidence 69999999999999999999999999986432110 00000 0
Q ss_pred CCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHH
Q 009592 215 DRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR 294 (531)
Q Consensus 215 ~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~ 294 (531)
.....|..+|||||||||+|+. ...+.||||+|+|+.+|++...+. .....++++||+||++
T Consensus 43 ~~~~~~~~gHGT~VAgii~g~~-----------~~~~~GvAp~a~i~~~~v~~~~~~-------~~~~~~i~~ai~~a~~ 104 (267)
T cd07476 43 ACQDGGASAHGTHVASLIFGQP-----------CSSVEGIAPLCRGLNIPIFAEDRR-------GCSQLDLARAINLALE 104 (267)
T ss_pred CCCCCCCCCcHHHHHHHHhcCC-----------CCCceeECcCCeEEEEEEEeCCCC-------CCCHHHHHHHHHHHHH
Confidence 1234567899999999999872 123579999999999999987642 3457899999999999
Q ss_pred cCCcEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceeeeeccccCCCcccceEeCCcc
Q 009592 295 DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGM 374 (531)
Q Consensus 295 ~g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~g~~~ 374 (531)
+|++|||||||...........+..+++++.++|++||+||||+|.....++...+++|+|||++.++....|+++|...
T Consensus 105 ~g~~VIN~S~G~~~~~~~~~~~l~~a~~~a~~~gvlvv~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~~~~~~~s~~g~~~ 184 (267)
T cd07476 105 QGAHIINISGGRLTQTGEADPILANAVAMCQQNNVLIVAAAGNEGCACLHVPAALPSVLAVGAMDDDGLPLKFSNWGADY 184 (267)
T ss_pred CCCCEEEecCCcCCCCCCCCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCCceEEEEeecCCCCeeeecCCCCCC
Confidence 99999999999854444455678888999999999999999999987777788899999999999988888899998653
Q ss_pred ---ee--eeeeeccCCCCCCceeEEecccCCCCcCccccCCCC
Q 009592 375 ---EI--IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCL 412 (531)
Q Consensus 375 ---~~--~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~ 412 (531)
++ ||.++.++.+++.|..++|||||+|+|+|..+++.+
T Consensus 185 ~~~~l~ApG~~i~~~~~~~~~~~~sGTS~AaP~vaG~aALl~s 227 (267)
T cd07476 185 RKKGILAPGENILGAALGGEVVRRSGTSFAAAIVAGIAALLLS 227 (267)
T ss_pred CCceEEecCCCceeecCCCCeEEeccHHHHHHHHHHHHHHHHH
Confidence 33 999999888888999999999999999999887654
No 6
>cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins. Subtilisins are a group of alkaline proteinases originating from different strains of Bacillus subtilis. Novo is one of the strains that produced enzymes belonging to this group. The enzymes obtained from the Novo and BPN' strains are identical. The Carlsburg and Novo subtilisins are thought to have arisen from a common ancestral protein. They have similar peptidase and esterase activities, pH profiles, catalyze transesterification reactions, and are both inhibited by diispropyl fluorophosphate, though they differ in 85 positions in the amino acid sequence. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a cat
Probab=100.00 E-value=2.6e-38 Score=317.56 Aligned_cols=254 Identities=20% Similarity=0.223 Sum_probs=176.8
Q ss_pred CceEEEEeecccCCCCCCCcCCCCCCCCC-CccccccccCCcCcccCCceeeeEEecccccccc----cCCCC------C
Q 009592 143 QDVIVGLVDNGVWPESKSFSDEGMGPVPK-SWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQL----YGPLN------A 211 (531)
Q Consensus 143 ~gv~VaViDtGid~~Hp~f~~~~~~~~~~-~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~----~~~~~------~ 211 (531)
++|+|||||||||++||+|++.......+ ...|....+.+|.. + +.+++|...+... ..+.+ .
T Consensus 1 ~~V~VaviDtGid~~Hpdl~~~~~~n~~e~~~~~~d~d~ng~~d-----d-~~g~~f~~~~~~~~~~~~~~~~~~~~~~g 74 (291)
T cd07483 1 KTVIVAVLDSGVDIDHEDLKGKLWINKKEIPGNGIDDDNNGYID-----D-VNGWNFLGQYDPRRIVGDDPYDLTEKGYG 74 (291)
T ss_pred CceEEEEEeCCCCCCChhhhhhhhcCCcccCCCCccCCCCCccc-----c-ccCeeccCCcccccccccCcccccccccc
Confidence 68999999999999999998753211110 01121122222211 1 2233333211100 00000 0
Q ss_pred CCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHH
Q 009592 212 TEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDD 291 (531)
Q Consensus 212 ~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~ 291 (531)
+.+...+.+..+|||||||||+|.. .+...+.||||+|+|+++|++... .....++++||+|
T Consensus 75 ~~~~~~~~~~~gHGT~VAGiIaa~~---------~n~~g~~GvAp~a~i~~~k~~~~g---------~~~~~~i~~Ai~~ 136 (291)
T cd07483 75 NNDVNGPISDADHGTHVAGIIAAVR---------DNGIGIDGVADNVKIMPLRIVPNG---------DERDKDIANAIRY 136 (291)
T ss_pred ccccCCCCCCCCcHHHHHHHHhCcC---------CCCCceEEECCCCEEEEEEEecCC---------CcCHHHHHHHHHH
Confidence 1122345578999999999999983 222236799999999999998643 5667899999999
Q ss_pred HHHcCCcEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCC---CC--------CCCCceeeeecccc
Q 009592 292 AIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSS---LS--------NLAPWLITVGAGSL 360 (531)
Q Consensus 292 a~~~g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~---~~--------~~~~~vitVgA~~~ 360 (531)
|+++|++|||||||... ......+..+++++.++|+++|+||||+|.+... ++ ...+++|+|||++.
T Consensus 137 a~~~g~~IiN~S~G~~~--~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~p~~~~~~~~~~~~~vi~Vga~~~ 214 (291)
T cd07483 137 AVDNGAKVINMSFGKSF--SPNKEWVDDAIKYAESKGVLIVHAAGNDGLDLDITPNFPNDYDKNGGEPANNFITVGASSK 214 (291)
T ss_pred HHHCCCcEEEeCCCCCC--CCccHHHHHHHHHHHhCCeEEEEeCCCCCCCCCcCcCCCCcccccCccccCCeeEEeeccc
Confidence 99999999999999732 2233456778889999999999999999965321 12 13589999999987
Q ss_pred CCC---cccceEeCC-ccee--eeeeeccCCCCCCceeEEecccCCCCcCccccCCCCCCC-CCCCccc
Q 009592 361 DRD---FVGPVVLGT-GMEI--IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGS-LTPEKVK 422 (531)
Q Consensus 361 ~~~---~~~~~~~g~-~~~~--~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~~-~~~~~~~ 422 (531)
... +..||++|. ..++ ||..+.++.+++.|..++|||||+|+|+|..+++.+..+ +++.+++
T Consensus 215 ~~~~~~~~~~Sn~G~~~vdi~APG~~i~s~~~~~~~~~~sGTS~AaP~vaG~aAl~~s~~p~lt~~~v~ 283 (291)
T cd07483 215 KYENNLVANFSNYGKKNVDVFAPGERIYSTTPDNEYETDSGTSMAAPVVSGVAALIWSYYPNLTAKEVK 283 (291)
T ss_pred cCCcccccccCCCCCCceEEEeCCCCeEeccCcCCeEeeccHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Confidence 643 678999987 4555 999999988888999999999999999999988876433 4444443
No 7
>cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=9.5e-38 Score=305.26 Aligned_cols=216 Identities=18% Similarity=0.174 Sum_probs=167.0
Q ss_pred CCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCC
Q 009592 142 GQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDM 221 (531)
Q Consensus 142 G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 221 (531)
+++|+|||||||||++||+|+++.. ..++|....... ........|.
T Consensus 2 ~~~V~VaVIDsGvd~~hpdl~~~i~---------------------------~~~~~~~~~~~~------~~~~~~~~d~ 48 (247)
T cd07491 2 LKRIKVALIDDGVDILDSDLQGKII---------------------------GGKSFSPYEGDG------NKVSPYYVSA 48 (247)
T ss_pred CCCCEEEEECCCcCCCchhhccccc---------------------------cCCCCCCCCCCc------ccCCCCCCCC
Confidence 7899999999999999999975421 111222110000 0011233568
Q ss_pred CCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEEE
Q 009592 222 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 301 (531)
Q Consensus 222 ~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn 301 (531)
.||||||||||+ |+||+|+|+++||++..+.... -..+....+++||+||+++|+||||
T Consensus 49 ~gHGT~vAgiI~-------------------gvap~a~i~~~kv~~~~~~~~~--~~~~~~~~i~~Ai~~Ai~~gadIIn 107 (247)
T cd07491 49 DGHGTAMARMIC-------------------RICPSAKLYVIKLEDRPSPDSN--KRSITPQSAAKAIEAAVEKKVDIIS 107 (247)
T ss_pred CCcHHHHHHHHH-------------------HHCCCCeEEEEEecccCCCCCc--ccccCHHHHHHHHHHHHHCCCcEEE
Confidence 899999999995 7899999999999987642100 0034678899999999999999999
Q ss_pred EeccCCCCC--CCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CC--CCCCCceeeeeccccCCCcccceEeCCccee
Q 009592 302 ISIGTNQPF--AFNRDGIAIGALNAVKHNILVACSAGNSGPAPS-SL--SNLAPWLITVGAGSLDRDFVGPVVLGTGMEI 376 (531)
Q Consensus 302 ~S~G~~~~~--~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~--~~~~~~vitVgA~~~~~~~~~~~~~g~~~~~ 376 (531)
||||..... ......+..++++|.++|++||+||||+|.+.. .+ +...++||+|||++.++.+..|+++|..+++
T Consensus 108 ~S~g~~~~~~~~~~~~~l~~ai~~A~~~GilvvaaAGN~g~~~~~~~~~pa~~~~Vi~VgA~~~~g~~~~~S~~g~~vd~ 187 (247)
T cd07491 108 MSWTIKKPEDNDNDINELENAIKEALDRGILLFCSASDQGAFTGDTYPPPAARDRIFRIGAADEDGGADAPVGDEDRVDY 187 (247)
T ss_pred eeeecccccccccchHHHHHHHHHHHhCCeEEEEecCCCCCcCCCcccCcccCCCeEEEEeeCCCCCCccccCCCCcceE
Confidence 999984321 123567888889999999999999999998764 33 3467999999999999999999999988877
Q ss_pred --eeeeeccCCC---CCCceeEEecccCCCCcCccccCCC
Q 009592 377 --IGKTVTPYNL---KKMHPLVYAADVVVPGVHQNETNQC 411 (531)
Q Consensus 377 --~G~~i~~~~~---~~~~~~~~gts~a~p~v~~~~a~~c 411 (531)
||..|.++.+ ++.|..++|||||+|+|+|.++++.
T Consensus 188 ~APG~~i~s~~~~~~~~~~~~~sGTS~Atp~vaGvaAL~l 227 (247)
T cd07491 188 ILPGENVEARDRPPLSNSFVTHTGSSVATALAAGLAALIL 227 (247)
T ss_pred EeCCCceecCCcCCCCCCeeeeccHHHHHHHHHHHHHHHH
Confidence 9999987754 6789999999999999999887664
No 8
>cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.5e-37 Score=303.11 Aligned_cols=215 Identities=21% Similarity=0.218 Sum_probs=173.0
Q ss_pred eEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCCCCC
Q 009592 145 VIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGH 224 (531)
Q Consensus 145 v~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gH 224 (531)
|+|||||||||.+||+|++..+ ..+++.. ....|..+|
T Consensus 1 V~VavIDsGvd~~hp~l~~~~~---------------------------~~~~~~~---------------~~~~~~~~H 38 (239)
T cd05561 1 VRVGMIDTGIDTAHPALSAVVI---------------------------ARLFFAG---------------PGAPAPSAH 38 (239)
T ss_pred CEEEEEeCCCCCCCcccccCcc---------------------------ccccCCC---------------CCCCCCCCC
Confidence 7899999999999999975421 0011100 134567899
Q ss_pred CcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEEEEec
Q 009592 225 GTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISI 304 (531)
Q Consensus 225 GThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn~S~ 304 (531)
||||||||++.. ... .||||+|+|+.+|++...+.. ..++..++++||+||+++|++||||||
T Consensus 39 GT~vAgiia~~~---------~~~---~Gvap~a~i~~~~v~~~~~~~-----~~~~~~~i~~ai~~a~~~g~~VIn~S~ 101 (239)
T cd05561 39 GTAVASLLAGAG---------AQR---PGLLPGADLYGADVFGRAGGG-----EGASALALARALDWLAEQGVRVVNISL 101 (239)
T ss_pred HHHHHHHHhCCC---------CCC---cccCCCCEEEEEEEecCCCCC-----CCcCHHHHHHHHHHHHHCCCCEEEeCC
Confidence 999999999872 211 699999999999999865310 046788999999999999999999999
Q ss_pred cCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCC-CCCCCCCCceeeeeccccCCCcccceEeCCccee--eeeee
Q 009592 305 GTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP-SSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEI--IGKTV 381 (531)
Q Consensus 305 G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~~~vitVgA~~~~~~~~~~~~~g~~~~~--~G~~i 381 (531)
|.. . ...++.+++++.++|+++|+||||+|... ..+++..+++|+|||++.++....++++|...++ ||..+
T Consensus 102 g~~-~----~~~l~~ai~~a~~~gilvv~AaGN~g~~~~~~~Pa~~~~vi~V~a~~~~~~~~~~s~~g~~~di~ApG~~i 176 (239)
T cd05561 102 AGP-P----NALLAAAVAAAAARGMVLVAAAGNDGPAAPPLYPAAYPGVIAVTAVDARGRLYREANRGAHVDFAAPGVDV 176 (239)
T ss_pred CCC-C----CHHHHHHHHHHHHCCCEEEEecCCCCCCCCccCcccCCCceEEEeecCCCCccccCCCCCcceEEccccce
Confidence 972 2 35677788999999999999999999764 3566778999999999999999999999988887 99999
Q ss_pred ccCCCCCCceeEEecccCCCCcCccccCCCCCCCCCCCcccc
Q 009592 382 TPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKG 423 (531)
Q Consensus 382 ~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~~~~~~~~~g 423 (531)
.++.+++.|..++|||||+|+|+|..+.+.+..++++++++.
T Consensus 177 ~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~~~~~i~~ 218 (239)
T cd05561 177 WVAAPGGGYRYVSGTSFAAPFVTAALALLLQASPLAPDDARA 218 (239)
T ss_pred ecccCCCCEEEeCCHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 988888899999999999999999998876654455544433
No 9
>cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin. Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. Howev
Probab=100.00 E-value=1.5e-36 Score=302.54 Aligned_cols=239 Identities=21% Similarity=0.173 Sum_probs=180.4
Q ss_pred hhhcccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCC
Q 009592 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (531)
Q Consensus 134 ~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~ 213 (531)
++|..+++|+||+|+|||||||++||+|.+.... ..+ ..+...+..... ..+
T Consensus 1 ~aw~~g~~G~gv~IaviDtGid~~Hp~~~~~~~~-------------~~~------------~~~~~~~~~~~~---~~~ 52 (273)
T cd07485 1 AAWEFGTGGPGIIVAVVDTGVDGTHPDLQGNGDG-------------DGY------------DPAVNGYNFVPN---VGD 52 (273)
T ss_pred CccccccCCCCcEEEEEeCCCCCCChhhccCCCC-------------CCc------------ccccCCcccccc---cCC
Confidence 3799999999999999999999999999866210 001 000000000000 001
Q ss_pred CCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHH
Q 009592 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (531)
Q Consensus 214 ~~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~ 293 (531)
......|..+|||||||||++...+.... |+.. ...|+||+++|+.+|+++... ....+.+++||+|++
T Consensus 53 ~~~~~~~~~gHGT~VAgiia~~~~~~~~~-g~i~--~~~gvap~a~l~~~~v~~~~~--------~~~~~~~~~ai~~a~ 121 (273)
T cd07485 53 IDNDVSVGGGHGTHVAGTIAAVNNNGGGV-GGIA--GAGGVAPGVKIMSIQIFAGRY--------YVGDDAVAAAIVYAA 121 (273)
T ss_pred cCCCCCCCCCCHHHHHHHHHcccCCCcce-eccc--cccccCCCCEEEEEEEECCCC--------CccHHHHHHHHHHHH
Confidence 12244567899999999999873221100 0111 224699999999999999765 678899999999999
Q ss_pred HcCCcEEEEeccCCCCCCCcccHHHHHHHHHHhC-------CcEEEEecCCCCCCCCCCCCCCCceeeeeccccCCCccc
Q 009592 294 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKH-------NILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVG 366 (531)
Q Consensus 294 ~~g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~-------Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~ 366 (531)
+.|++|||||||... ...+...+..+++.+.++ |+++|+||||+|.....+++..+++|+|||++.+.....
T Consensus 122 ~~g~~Vin~S~g~~~-~~~~~~~~~~a~~~~~~~~~~~~~~g~lvv~AaGN~g~~~~~~pa~~~~vi~V~a~~~~~~~~~ 200 (273)
T cd07485 122 DNGAVILQNSWGGTG-GGIYSPLLKDAFDYFIENAGGSPLDGGIVVFSAGNSYTDEHRFPAAYPGVIAVAALDTNDNKAS 200 (273)
T ss_pred HcCCcEEEecCCCCC-ccccCHHHHHHHHHHHHhcccccCCCeEEEEecCCCCCCCCCCcccCCCeEEEEeccCCCCcCc
Confidence 999999999999832 233455677777888887 999999999999887777788899999999999999999
Q ss_pred ceEeCCccee--eee-eeccCCC------CCCceeEEecccCCCCcCccccCCCC
Q 009592 367 PVVLGTGMEI--IGK-TVTPYNL------KKMHPLVYAADVVVPGVHQNETNQCL 412 (531)
Q Consensus 367 ~~~~g~~~~~--~G~-~i~~~~~------~~~~~~~~gts~a~p~v~~~~a~~c~ 412 (531)
|+++|...++ ||. .+.++.+ .+.|..++|||||+|+|+|..|.+.+
T Consensus 201 ~S~~g~~~~i~apG~~~i~~~~~~~~~~~~~~~~~~sGTS~AaP~VaG~aAll~~ 255 (273)
T cd07485 201 FSNYGRWVDIAAPGVGTILSTVPKLDGDGGGNYEYLSGTSMAAPHVSGVAALVLS 255 (273)
T ss_pred cccCCCceEEEeCCCCccccccccccCCCCCCeEeeccHHHHHHHHHHHHHHHHH
Confidence 9999998887 888 6666544 35799999999999999999887755
No 10
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid
Probab=100.00 E-value=2.1e-36 Score=299.60 Aligned_cols=231 Identities=22% Similarity=0.243 Sum_probs=189.2
Q ss_pred cchhhhcccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCC
Q 009592 131 MGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLN 210 (531)
Q Consensus 131 ~~~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~ 210 (531)
+++.+|..+ +|+||+|+|||||||++||+|.... +...+++.+.
T Consensus 17 ~~~~~~~~~-~G~gv~I~viDsGi~~~h~~l~~~~--------------------------~~~~~~~~~~--------- 60 (260)
T cd07484 17 GAPKAWDIT-GGSGVTVAVVDTGVDPTHPDLLKVK--------------------------FVLGYDFVDN--------- 60 (260)
T ss_pred ChHHHHhhc-CCCCCEEEEEeCCCCCCCcccccCC--------------------------cccceeccCC---------
Confidence 558899988 9999999999999999999984221 1222333221
Q ss_pred CCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHH
Q 009592 211 ATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAID 290 (531)
Q Consensus 211 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~ 290 (531)
...+.|..+|||||||||++.. .....+.|+||+|+|+.+|+++..+ .+...++++||+
T Consensus 61 ----~~~~~d~~~HGT~vagii~~~~---------~~~~~~~Giap~a~l~~~~v~~~~~--------~~~~~~~~~ai~ 119 (260)
T cd07484 61 ----DSDAMDDNGHGTHVAGIIAAAT---------NNGTGVAGVAPKAKIMPVKVLDANG--------SGSLADIANGIR 119 (260)
T ss_pred ----CCCCCCCCCcHHHHHHHHhCcc---------CCCCceEeECCCCEEEEEEEECCCC--------CcCHHHHHHHHH
Confidence 1235677899999999999873 2223467999999999999998765 678889999999
Q ss_pred HHHHcCCcEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceeeeeccccCCCcccceEe
Q 009592 291 DAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVL 370 (531)
Q Consensus 291 ~a~~~g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~ 370 (531)
++++.|++|||||||... ....+..+++.+.++|+++|+||||+|.....+++.++++|+||+++.+.....++++
T Consensus 120 ~a~~~~~~iin~S~g~~~----~~~~~~~~~~~a~~~gilvV~aaGN~g~~~~~~pa~~~~vi~Vga~~~~~~~~~~s~~ 195 (260)
T cd07484 120 YAADKGAKVINLSLGGGL----GSTALQEAINYAWNKGVVVVAAAGNEGVSSVSYPAAYPGAIAVAATDQDDKRASFSNY 195 (260)
T ss_pred HHHHCCCeEEEecCCCCC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCeEEEEeeCCCCCcCCcCCC
Confidence 999999999999999843 4456777788899999999999999999888888899999999999999999999999
Q ss_pred CCccee--eeeeeccCCCCCCceeEEecccCCCCcCccccCCCCCCCCCCCccc
Q 009592 371 GTGMEI--IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVK 422 (531)
Q Consensus 371 g~~~~~--~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~~~~~~~~~ 422 (531)
|+..++ ||..+.+....+.|..+.|||+|+|.+++..+.+.+..++++.+++
T Consensus 196 g~~~~~~apG~~i~~~~~~~~~~~~~GTS~Aap~vag~~Al~~~~~p~t~~~i~ 249 (260)
T cd07484 196 GKWVDVSAPGGGILSTTPDGDYAYMSGTSMATPHVAGVAALLYSQGPLSASEVR 249 (260)
T ss_pred CCCceEEeCCCCcEeecCCCCEEEeeeHHHHHHHHHHHHHHHHhcCCCCHHHHH
Confidence 988777 8998888777788999999999999999988776554335554443
No 11
>cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=2.2e-36 Score=304.52 Aligned_cols=238 Identities=22% Similarity=0.178 Sum_probs=153.3
Q ss_pred CCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCC
Q 009592 142 GQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDM 221 (531)
Q Consensus 142 G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 221 (531)
|+||+|||||||||.+||||.++... .|. ..| ..+ ..+....++.. .....+.|.
T Consensus 1 G~gV~VaViDTGid~~HPdl~~~~~~----~~~------~~~--d~~-~~~~~g~d~~~------------~~~~~~~D~ 55 (311)
T cd07497 1 GEGVVIAIVDTGVDYSHPDLDIYGNF----SWK------LKF--DYK-AYLLPGMDKWG------------GFYVIMYDF 55 (311)
T ss_pred CCCeEEEEEeCCcCCCChhHhcccCC----Ccc------ccc--CcC-CCccCCcCCCC------------CccCCCCCc
Confidence 89999999999999999999754210 000 000 000 01111111111 111246788
Q ss_pred CCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHH-------HHHHHHHH-
Q 009592 222 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADM-------LAAIDDAI- 293 (531)
Q Consensus 222 ~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i-------~~ai~~a~- 293 (531)
+||||||||||||......+..|-.....+.||||+|+|+++|+|...+ ......+ ..+++|.+
T Consensus 56 ~gHGThvAGiiag~~~~~~~~~~~~~~~g~~GVAP~A~l~~vkvl~~~~--------~~~~~~~~~g~~~~~~~~~~~~~ 127 (311)
T cd07497 56 FSHGTSCASVAAGRGKMEYNLYGYTGKFLIRGIAPDAKIAAVKALWFGD--------VIYAWLWTAGFDPVDRKLSWIYT 127 (311)
T ss_pred cccchhHHHHHhccCcccccccccccccceeeeCCCCEEEEEEEEecCC--------cchhhhhhhccchhhhhhhhhhc
Confidence 9999999999999832211110000123568999999999999997543 2322222 22445543
Q ss_pred -HcCCcEEEEeccCCCCCC----CcccHHHHHHHH-HHhCCcEEEEecCCCCCCCCC--CCCCCCceeeeeccccC----
Q 009592 294 -RDGVHVLSISIGTNQPFA----FNRDGIAIGALN-AVKHNILVACSAGNSGPAPSS--LSNLAPWLITVGAGSLD---- 361 (531)
Q Consensus 294 -~~g~~VIn~S~G~~~~~~----~~~~~~~~a~~~-a~~~Gi~vV~AAGN~g~~~~~--~~~~~~~vitVgA~~~~---- 361 (531)
+++++|||||||...... ...+..+..++. +.++|+++|+||||+|+...+ .+..++++|+|||++..
T Consensus 128 ~~~~~~VIN~S~G~~~~~~~~~~~g~~~~~~~~d~~~~~~Gv~vV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~~~~~ 207 (311)
T cd07497 128 GGPRVDVISNSWGISNFAYTGYAPGLDISSLVIDALVTYTGVPIVSAAGNGGPGYGTITAPGAASLAISVGAATNFDYRP 207 (311)
T ss_pred cCCCceEEEecCCcCCCCccccccCcCHHHHHHHHHHhcCCCEEEEeCCCCCCCCccccCccCCCCeEEEEeccCCcccc
Confidence 679999999999842211 111233333333 248999999999999986444 44578999999999753
Q ss_pred -----------CCcccceEeCCcc------ee--eeeeeccCCC----------CCCceeEEecccCCCCcCccccCCCC
Q 009592 362 -----------RDFVGPVVLGTGM------EI--IGKTVTPYNL----------KKMHPLVYAADVVVPGVHQNETNQCL 412 (531)
Q Consensus 362 -----------~~~~~~~~~g~~~------~~--~G~~i~~~~~----------~~~~~~~~gts~a~p~v~~~~a~~c~ 412 (531)
+....||++|+.. ++ ||..++++.+ +..|..++|||||+|||++..|++.+
T Consensus 208 ~~~~~~~~~~~~~~~~fSs~Gp~~~g~~kPdv~ApG~~i~s~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VaG~aALll~ 287 (311)
T cd07497 208 FYLFGYLPGGSGDVVSWSSRGPSIAGDPKPDLAAIGAFAWAPGRVLDSGGALDGNEAFDLFGGTSMATPMTAGSAALVIS 287 (311)
T ss_pred hhhhccccCCCCCccccccCCCCcccCCCCceeccCcceEeecccCCCCcccCCCcceeeecchhhhhHHHHHHHHHHHH
Confidence 3456789998753 33 7887765433 23688999999999999999987765
No 12
>cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intr
Probab=100.00 E-value=9.8e-36 Score=306.97 Aligned_cols=252 Identities=21% Similarity=0.235 Sum_probs=189.8
Q ss_pred hhhcccC-CCCceEEEEeecccCCCCCCCcCCCCCCCCC-----CccccccccCCcCcccCCceeeeEEecccccccccC
Q 009592 134 DLLSKAR-YGQDVIVGLVDNGVWPESKSFSDEGMGPVPK-----SWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYG 207 (531)
Q Consensus 134 ~~~~~~~-~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~-----~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~ 207 (531)
++|+.+. +|+||+|||||||||++||+|.+....+... .+...+. .-...+.+.+++..++|.++....
T Consensus 1 ~~w~~~~~~G~gv~VaViDtGv~~~hp~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-- 75 (346)
T cd07475 1 PLWDKGGYKGEGMVVAVIDSGVDPTHDAFRLDDDSKAKYSEEFEAKKKKAG---IGYGKYYNEKVPFAYNYADNNDDI-- 75 (346)
T ss_pred ChhhhcCCCCCCcEEEEEeCCCCCCChhHccCCCcccccchhhhhhhhccc---CCCCcccccCCCeeEcCCCCCCcc--
Confidence 3688876 9999999999999999999998764432110 1111111 111235667888888887652211
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecC--CCccCccCCCCCCHHHH
Q 009592 208 PLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWA--TPKASKAAGNTCFEADM 285 (531)
Q Consensus 208 ~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~--~~~~~~~~~~~~~~~~i 285 (531)
....+..+|||||||||+|...+.. ....+.||||+|+|+.+|+++. .. ......+
T Consensus 76 --------~~~~~~~~HGT~vagiiag~~~~~~------~~~~~~GiAp~a~l~~~~v~~~~~~~--------~~~~~~~ 133 (346)
T cd07475 76 --------LDEDDGSSHGMHVAGIVAGNGDEED------NGEGIKGVAPEAQLLAMKVFSNPEGG--------STYDDAY 133 (346)
T ss_pred --------CCCCCCCCcHHHHHHHHhcCCCccc------cCCceEEeCCCCeEEEEEeecCCCCC--------CCCHHHH
Confidence 1245788999999999999832110 1345689999999999999974 32 6788899
Q ss_pred HHHHHHHHHcCCcEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCC----------------CCCCC
Q 009592 286 LAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSS----------------LSNLA 349 (531)
Q Consensus 286 ~~ai~~a~~~g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~----------------~~~~~ 349 (531)
++|++++++.|++|||||||...........+..+++++.++|+++|+||||+|..... .+...
T Consensus 134 ~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~a~~~giliv~aAGN~g~~~~~~~~~~~~~~~~~~~~~~p~~~ 213 (346)
T cd07475 134 AKAIEDAVKLGADVINMSLGSTAGFVDLDDPEQQAIKRAREAGVVVVVAAGNDGNSGSGTSKPLATNNPDTGTVGSPATA 213 (346)
T ss_pred HHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHhhCCeEEEEeCCCCCccCccccCcccccCCCcceecCCccC
Confidence 99999999999999999999954444556678888899999999999999999865322 12356
Q ss_pred Cceeeeeccc------cCCCcccceEeCCcc------ee--eeeeeccCCCCCCceeEEecccCCCCcCccccCCCC
Q 009592 350 PWLITVGAGS------LDRDFVGPVVLGTGM------EI--IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCL 412 (531)
Q Consensus 350 ~~vitVgA~~------~~~~~~~~~~~g~~~------~~--~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~ 412 (531)
+++|+|||++ .......|+++|... ++ ||..++++..++.|....|||+|+|+|+|..|.+.+
T Consensus 214 ~~~i~Vga~~~~~~~~~~~~~~~~S~~G~~~~~~~~pdi~apG~~i~s~~~~~~~~~~~GTS~AaP~VaG~aALl~~ 290 (346)
T cd07475 214 DDVLTVASANKKVPNPNGGQMSGFSSWGPTPDLDLKPDITAPGGNIYSTVNDNTYGYMSGTSMASPHVAGASALVKQ 290 (346)
T ss_pred CCceEEeecccccCCCCCCccCCCcCCCCCcccCcCCeEEeCCCCeEEecCCCceEeeCcHHHHHHHHHHHHHHHHH
Confidence 8999999997 445667788888643 33 899998887788899999999999999998886654
No 13
>cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins. The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding moti
Probab=100.00 E-value=5.5e-36 Score=295.71 Aligned_cols=220 Identities=24% Similarity=0.298 Sum_probs=180.6
Q ss_pred hhcccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCC
Q 009592 135 LLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATED 214 (531)
Q Consensus 135 ~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~ 214 (531)
+|..+++|+||+||||||||+++||+|.++. ...+++...
T Consensus 17 ~~~~~~~G~gv~VaViDsGi~~~h~~~~~~~---------------------------~~~~~~~~~------------- 56 (255)
T cd04077 17 YYYDSSTGSGVDVYVLDTGIRTTHVEFGGRA---------------------------IWGADFVGG------------- 56 (255)
T ss_pred eEecCCCCCCcEEEEEcCCCCCCChhhhCCe---------------------------eeeeecCCC-------------
Confidence 7778999999999999999999999997432 122222221
Q ss_pred CCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHH
Q 009592 215 DRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR 294 (531)
Q Consensus 215 ~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~ 294 (531)
....|..+|||||||||++.. .||||+|+|+.+|+++..+ ....+.++++|+|+++
T Consensus 57 -~~~~d~~~HGT~vAgiia~~~---------------~GvAp~a~i~~~~i~~~~~--------~~~~~~~~~ai~~~~~ 112 (255)
T cd04077 57 -DPDSDCNGHGTHVAGTVGGKT---------------YGVAKKANLVAVKVLDCNG--------SGTLSGIIAGLEWVAN 112 (255)
T ss_pred -CCCCCCCccHHHHHHHHHccc---------------cCcCCCCeEEEEEEeCCCC--------CcCHHHHHHHHHHHHh
Confidence 125577899999999999761 4999999999999999875 6778999999999998
Q ss_pred c-----CCcEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCC-CCCCCCCCceeeeeccccCCCcccce
Q 009592 295 D-----GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP-SSLSNLAPWLITVGAGSLDRDFVGPV 368 (531)
Q Consensus 295 ~-----g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~~~vitVgA~~~~~~~~~~~ 368 (531)
. +++|||||||... ...+..+++++.++|+++|+||||+|... ...++..+++|+|||++.+.....|+
T Consensus 113 ~~~~~~~~~iin~S~g~~~-----~~~~~~~~~~~~~~g~liV~aaGN~g~~~~~~~pa~~~~vi~Vga~~~~~~~~~~S 187 (255)
T cd04077 113 DATKRGKPAVANMSLGGGA-----STALDAAVAAAVNAGVVVVVAAGNSNQDACNYSPASAPEAITVGATDSDDARASFS 187 (255)
T ss_pred cccccCCCeEEEeCCCCCC-----CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCcCccCCCceEEEeccCCCCCccCcc
Confidence 7 4899999999832 45677788999999999999999999876 34556789999999999999999999
Q ss_pred EeCCccee--eeeeeccCCC--CCCceeEEecccCCCCcCccccCCCCCCC-CCCCcccc
Q 009592 369 VLGTGMEI--IGKTVTPYNL--KKMHPLVYAADVVVPGVHQNETNQCLPGS-LTPEKVKG 423 (531)
Q Consensus 369 ~~g~~~~~--~G~~i~~~~~--~~~~~~~~gts~a~p~v~~~~a~~c~~~~-~~~~~~~g 423 (531)
++|+..++ ||..+.+... +..|..+.|||+|+|+|+|..+.+.+..+ +.+++++.
T Consensus 188 ~~g~~~~i~apG~~i~~~~~~~~~~~~~~~GTS~Aap~vaG~~All~~~~p~~~~~~v~~ 247 (255)
T cd04077 188 NYGSCVDIFAPGVDILSAWIGSDTATATLSGTSMAAPHVAGLAAYLLSLGPDLSPAEVKA 247 (255)
T ss_pred cCCCCCcEEeCCCCeEecccCCCCcEEeeCcHHHHHHHHHHHHHHHHhhCCCCCHHHHHH
Confidence 99998876 8998887766 67899999999999999999987766433 34444443
No 14
>cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.1e-35 Score=298.21 Aligned_cols=185 Identities=19% Similarity=0.175 Sum_probs=150.2
Q ss_pred CCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHH---
Q 009592 217 SPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI--- 293 (531)
Q Consensus 217 ~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~--- 293 (531)
...+..+|||||||||+|.. .+...+.||||+|+|+.+|+++..+ ...+++++|++|++
T Consensus 66 ~~~~~~~HGT~vAgiiaa~~---------~~~~~~~GvAp~a~i~~~~v~~~~~---------~~~~~i~~a~~~a~~~~ 127 (285)
T cd07496 66 GVSPSSWHGTHVAGTIAAVT---------NNGVGVAGVAWGARILPVRVLGKCG---------GTLSDIVDGMRWAAGLP 127 (285)
T ss_pred CCCCCCCCHHHHHHHHhCcC---------CCCCCceeecCCCeEEEEEEecCCC---------CcHHHHHHHHHHHhccC
Confidence 34567899999999999983 2233457999999999999998773 47889999999998
Q ss_pred -------HcCCcEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCC-CCCCCCCCceeeeeccccCCCcc
Q 009592 294 -------RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP-SSLSNLAPWLITVGAGSLDRDFV 365 (531)
Q Consensus 294 -------~~g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~~~vitVgA~~~~~~~~ 365 (531)
.++++|||||||..... ...+..+++++.++|++||+||||+|.+. ..++..++++|+|||++.++..+
T Consensus 128 ~~~~~~~~~~~~Iin~S~G~~~~~---~~~~~~ai~~a~~~GvivV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~~~~~ 204 (285)
T cd07496 128 VPGVPVNPNPAKVINLSLGGDGAC---SATMQNAINDVRARGVLVVVAAGNEGSSASVDAPANCRGVIAVGATDLRGQRA 204 (285)
T ss_pred cCCCcccCCCCeEEEeCCCCCCCC---CHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCCCCCCceEEEeccCCCCCcc
Confidence 45789999999984221 45677788999999999999999999876 55667889999999999999999
Q ss_pred cceEeCCccee--eeeeeccCCC---------------CCCceeEEecccCCCCcCccccCCCCCC-CCCCCccc
Q 009592 366 GPVVLGTGMEI--IGKTVTPYNL---------------KKMHPLVYAADVVVPGVHQNETNQCLPG-SLTPEKVK 422 (531)
Q Consensus 366 ~~~~~g~~~~~--~G~~i~~~~~---------------~~~~~~~~gts~a~p~v~~~~a~~c~~~-~~~~~~~~ 422 (531)
.|+++|...++ ||..+.++.. ...|...+|||||+|+|+|..+...+.. .+++++++
T Consensus 205 ~~S~~g~~vdi~apG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAlv~~~~p~lt~~~v~ 279 (285)
T cd07496 205 SYSNYGPAVDVSAPGGDCASDVNGDGYPDSNTGTTSPGGSTYGFLQGTSMAAPHVAGVAALMKSVNPSLTPAQIE 279 (285)
T ss_pred cccCCCCCCCEEeCCCCccccCCCCccccccccccCCCCCceEeeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 99999998877 8888765432 3457889999999999999998776532 34554443
No 15
>cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.8e-35 Score=292.89 Aligned_cols=229 Identities=21% Similarity=0.197 Sum_probs=175.8
Q ss_pred ceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCC-CCCCC
Q 009592 144 DVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRS-PRDMD 222 (531)
Q Consensus 144 gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~ 222 (531)
||+|||||||||++||+|.... ...+.++.+.++|.++. .. ..|..
T Consensus 1 Gv~VaviDsGi~~~h~~~~~~~--------------------~~~~~~i~~~~~~~~~~-------------~~~~~~~~ 47 (261)
T cd07493 1 GITIAVIDAGFPKVHEAFAFKH--------------------LFKNLRILGEYDFVDNS-------------NNTNYTDD 47 (261)
T ss_pred CCEEEEEccCCCccCcchhhhc--------------------cccCCceeeeecCccCC-------------CCCCCCCC
Confidence 7999999999999999995221 11234566777775531 12 35778
Q ss_pred CCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEEEE
Q 009592 223 GHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSI 302 (531)
Q Consensus 223 gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn~ 302 (531)
+|||||||+|+|.. .+.+.||||+|+|+.+|+....... ......++.|++|+.++|++||||
T Consensus 48 ~HGT~vagiia~~~-----------~~~~~GvAp~a~l~~~~~~~~~~~~------~~~~~~~~~ai~~a~~~~v~VIn~ 110 (261)
T cd07493 48 DHGTAVLSTMAGYT-----------PGVMVGTAPNASYYLARTEDVASET------PVEEDNWVAAAEWADSLGVDIISS 110 (261)
T ss_pred CchhhhheeeeeCC-----------CCCEEEeCCCCEEEEEEecccCCcc------cccHHHHHHHHHHHHHcCCCEEEe
Confidence 99999999999872 2346899999999999997644321 345677899999999999999999
Q ss_pred eccCCCCCCC-----------cccHHHHHHHHHHhCCcEEEEecCCCCCC---CCCCCCCCCceeeeeccccCCCcccce
Q 009592 303 SIGTNQPFAF-----------NRDGIAIGALNAVKHNILVACSAGNSGPA---PSSLSNLAPWLITVGAGSLDRDFVGPV 368 (531)
Q Consensus 303 S~G~~~~~~~-----------~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~---~~~~~~~~~~vitVgA~~~~~~~~~~~ 368 (531)
|||....... ....+..+++++.++|+++|+||||+|.. ...++...+++|+|||++.+.....|+
T Consensus 111 S~G~~~~~~~~~~~~~~~~~~~~~~l~~a~~~a~~~gilvv~AAGN~g~~~~~~~~~Pa~~~~vi~Vga~~~~~~~~~~S 190 (261)
T cd07493 111 SLGYTTFDNPTYSYTYADMDGKTSFISRAANIAASKGMLVVNSAGNEGSTQWKGIGAPADAENVLSVGAVDANGNKASFS 190 (261)
T ss_pred CCCcCCCCCcccccccccccccchHHHHHHHHHHhCCeEEEEECCCCCCCCCCcccCcccCCceEEEEEeccCCCCCccC
Confidence 9998432211 12457778899999999999999999987 345566789999999999998889999
Q ss_pred EeCCcc------ee--eeeeeccCCCCCCceeEEecccCCCCcCccccCCCCCC-CCCCCccc
Q 009592 369 VLGTGM------EI--IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPG-SLTPEKVK 422 (531)
Q Consensus 369 ~~g~~~------~~--~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~-~~~~~~~~ 422 (531)
++|+.. ++ ||..++....++.|..++|||||+|+|+|..+.+.+.. .+++.+++
T Consensus 191 ~~G~~~~~~~~pdi~a~G~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~i~ 253 (261)
T cd07493 191 SIGPTADGRLKPDVMALGTGIYVINGDGNITYANGTSFSCPLIAGLIACLWQAHPNWTNLQIK 253 (261)
T ss_pred CcCCCCCCCcCCceEecCCCeEEEcCCCcEEeeCcHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Confidence 988753 23 78888776667889999999999999999998876643 34444443
No 16
>cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5. gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=3.6e-35 Score=298.29 Aligned_cols=232 Identities=22% Similarity=0.242 Sum_probs=176.0
Q ss_pred chhhhcccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccc-cccccCCCC
Q 009592 132 GQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKG-FEQLYGPLN 210 (531)
Q Consensus 132 ~~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~-~~~~~~~~~ 210 (531)
++.+|+.+++|+||+|||||||||++||+|.++... +.++.+.++|..+ +...+
T Consensus 2 v~~~~~~g~tG~gv~VaViDsGid~~hp~l~~~~~~---------------------~~~~~~~~d~~~~~~~~~~---- 56 (312)
T cd07489 2 VDKLHAEGITGKGVKVAVVDTGIDYTHPALGGCFGP---------------------GCKVAGGYDFVGDDYDGTN---- 56 (312)
T ss_pred hhhHHhCCCCCCCCEEEEEECCCCCCChhhhcCCCC---------------------CceeccccccCCccccccc----
Confidence 478999999999999999999999999999864211 1122233333321 11010
Q ss_pred CCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHH
Q 009592 211 ATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAID 290 (531)
Q Consensus 211 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~ 290 (531)
...+...+.|..+|||||||||++.. ++ ..+.||||+|+|+.+|+++..+ ....+.++++|+
T Consensus 57 ~~~~~~~~~d~~gHGT~vAgiia~~~---------~~-~~~~GiAp~a~i~~~~v~~~~~--------~~~~~~~~~ai~ 118 (312)
T cd07489 57 PPVPDDDPMDCQGHGTHVAGIIAANP---------NA-YGFTGVAPEATLGAYRVFGCSG--------STTEDTIIAAFL 118 (312)
T ss_pred CCCCCCCCCCCCCcHHHHHHHHhcCC---------CC-CceEEECCCCEEEEEEeecCCC--------CCCHHHHHHHHH
Confidence 11122356677999999999999983 22 3467999999999999998665 677888999999
Q ss_pred HHHHcCCcEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC---CCCCCCCceeeeeccccCCCcccc
Q 009592 291 DAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS---SLSNLAPWLITVGAGSLDRDFVGP 367 (531)
Q Consensus 291 ~a~~~g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~---~~~~~~~~vitVgA~~~~~~~~~~ 367 (531)
|+++++++|||||||... .+....+..+++++.++|+++|+||||+|.... ..+...+++|+|||++ ..+
T Consensus 119 ~a~~~~~~iIn~S~g~~~--~~~~~~~~~~~~~~~~~gv~iv~aaGN~g~~~~~~~~~p~~~~~vi~Vga~~-----~~~ 191 (312)
T cd07489 119 RAYEDGADVITASLGGPS--GWSEDPWAVVASRIVDAGVVVTIAAGNDGERGPFYASSPASGRGVIAVASVD-----SYF 191 (312)
T ss_pred HHHhcCCCEEEeCCCcCC--CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccCCccCCCeEEEEEec-----CCc
Confidence 999999999999999842 334467777888999999999999999987543 2345679999999987 455
Q ss_pred eEeCCcc------ee--eeeeeccCCCCC--CceeEEecccCCCCcCccccCCCCC
Q 009592 368 VVLGTGM------EI--IGKTVTPYNLKK--MHPLVYAADVVVPGVHQNETNQCLP 413 (531)
Q Consensus 368 ~~~g~~~------~~--~G~~i~~~~~~~--~~~~~~gts~a~p~v~~~~a~~c~~ 413 (531)
+++|+.. ++ ||..+.++.+.. .|..+.|||+|+|+++|..+++.+.
T Consensus 192 s~~g~~~~~~~kpdv~ApG~~i~~~~~~~~~~~~~~~GTS~Aap~vaG~~Al~~~~ 247 (312)
T cd07489 192 SSWGPTNELYLKPDVAAPGGNILSTYPLAGGGYAVLSGTSMATPYVAGAAALLIQA 247 (312)
T ss_pred cCCCCCCCCCcCccEEcCCCCEEEeeeCCCCceEeeccHHHHHHHHHHHHHHHHHh
Confidence 6666543 33 888887766644 4999999999999999988877654
No 17
>cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins. Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity.
Probab=100.00 E-value=3.7e-35 Score=291.19 Aligned_cols=221 Identities=20% Similarity=0.154 Sum_probs=170.4
Q ss_pred CCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCC
Q 009592 142 GQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDM 221 (531)
Q Consensus 142 G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 221 (531)
|+||+|||||||||++||+|.+... +... ..+...+.+.+. ......+.|.
T Consensus 1 G~GV~VaViDsGi~~~hp~l~~~~~--------~~~~-----------~~~~~~~~~~d~----------~~~~~~~~d~ 51 (264)
T cd07481 1 GTGIVVANIDTGVDWTHPALKNKYR--------GWGG-----------GSADHDYNWFDP----------VGNTPLPYDD 51 (264)
T ss_pred CCCcEEEEEeCCCCCCChhHhhccc--------ccCC-----------CCcccccccccC----------CCCCCCCCCC
Confidence 8999999999999999999986411 0000 000000111110 0112355678
Q ss_pred CCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHH-------
Q 009592 222 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR------- 294 (531)
Q Consensus 222 ~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~------- 294 (531)
.+|||||||||+|.. .... ..||||+|+|+.+|+++.. .+...+++++++|++.
T Consensus 52 ~~HGT~vagii~g~~---------~~~~-~~GvAp~a~i~~~~~~~~~---------~~~~~~~~~a~~~~~~~~~~~~~ 112 (264)
T cd07481 52 NGHGTHTMGTMVGND---------GDGQ-QIGVAPGARWIACRALDRN---------GGNDADYLRCAQWMLAPTDSAGN 112 (264)
T ss_pred CCchhhhhhheeecC---------CCCC-ceEECCCCeEEEEEeecCC---------CCcHHHHHHHHHHHHhccccccc
Confidence 899999999999872 2222 3799999999999999876 5778899999999975
Q ss_pred -----cCCcEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCC---CCCCCCceeeeeccccCCCccc
Q 009592 295 -----DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSS---LSNLAPWLITVGAGSLDRDFVG 366 (531)
Q Consensus 295 -----~g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~---~~~~~~~vitVgA~~~~~~~~~ 366 (531)
.|++|||||||.... ....+..+++.+.++|++||+||||+|.+... ++..++++|+|||++.+.....
T Consensus 113 ~~~~~~~~~Iin~S~G~~~~---~~~~~~~~~~~~~~~gvlvV~aaGN~~~~~~~~~~~pa~~~~vi~Vga~~~~~~~~~ 189 (264)
T cd07481 113 PADPDLAPDVINNSWGGPSG---DNEWLQPAVAAWRAAGIFPVFAAGNDGPRCSTLNAPPANYPESFAVGATDRNDVLAD 189 (264)
T ss_pred ccccccCCeEEEeCCCcCCC---CchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCcCCCCcCCceEEEEecCCCCCCcc
Confidence 789999999998432 34555667788889999999999999976433 4567899999999999999999
Q ss_pred ceEeCCcc------ee--eeeeeccCCCCCCceeEEecccCCCCcCccccCCCCC
Q 009592 367 PVVLGTGM------EI--IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLP 413 (531)
Q Consensus 367 ~~~~g~~~------~~--~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~ 413 (531)
|+++|... ++ ||..+.+..+++.|..+.|||||+|+|+|..+.+.+.
T Consensus 190 ~S~~g~~~~~~~~~dv~ApG~~i~s~~~~~~~~~~~GTS~AaP~vaG~aAll~~~ 244 (264)
T cd07481 190 FSSRGPSTYGRIKPDISAPGVNIRSAVPGGGYGSSSGTSMAAPHVAGVAALLWSA 244 (264)
T ss_pred ccCCCCCCCCCcCceEEECCCCeEEecCCCceEeeCcHHHHHHHHHHHHHHHHHh
Confidence 99998765 55 8999988888889999999999999999988877654
No 18
>cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=4.2e-35 Score=287.09 Aligned_cols=223 Identities=22% Similarity=0.206 Sum_probs=177.1
Q ss_pred eEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCCCCC
Q 009592 145 VIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGH 224 (531)
Q Consensus 145 v~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gH 224 (531)
|+|||||||||++||+|++.. +++..+++.. ....+.|..+|
T Consensus 1 V~VaviDsGi~~~hp~l~~~~-------------------------~~~~~~~~~~-------------~~~~~~~~~~H 42 (242)
T cd07498 1 VVVAIIDTGVDLNHPDLSGKP-------------------------KLVPGWNFVS-------------NNDPTSDIDGH 42 (242)
T ss_pred CEEEEecCCCCCCChhhccCc-------------------------CccCCccccC-------------CCCCCCCCCCC
Confidence 689999999999999997531 0001111111 11134578899
Q ss_pred CcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEEEEec
Q 009592 225 GTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISI 304 (531)
Q Consensus 225 GThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn~S~ 304 (531)
||||||||+|+. +....+.||||+|+|+.+|+++..+ ....+.+.++++|+++.+++||||||
T Consensus 43 GT~vAgiiag~~---------~~~~~~~Gvap~a~i~~~~~~~~~~--------~~~~~~~~~ai~~a~~~~~~Vin~S~ 105 (242)
T cd07498 43 GTACAGVAAAVG---------NNGLGVAGVAPGAKLMPVRIADSLG--------YAYWSDIAQAITWAADNGADVISNSW 105 (242)
T ss_pred HHHHHHHHHhcc---------CCCceeEeECCCCEEEEEEEECCCC--------CccHHHHHHHHHHHHHCCCeEEEecc
Confidence 999999999873 2233467999999999999998765 57789999999999999999999999
Q ss_pred cCCCCCCCcccHHHHHHHHHHh-CCcEEEEecCCCCCCCCCCCCCCCceeeeeccccCCCcccceEeCCccee--eeeee
Q 009592 305 GTNQPFAFNRDGIAIGALNAVK-HNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEI--IGKTV 381 (531)
Q Consensus 305 G~~~~~~~~~~~~~~a~~~a~~-~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~g~~~~~--~G~~i 381 (531)
|...........+..+++++.+ +|+++|+||||+|......+...+++|+|||++..+....|+++|...++ ||..+
T Consensus 106 g~~~~~~~~~~~~~~~~~~~~~~~gvliv~aaGN~g~~~~~~pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~apG~~~ 185 (242)
T cd07498 106 GGSDSTESISSAIDNAATYGRNGKGGVVLFAAGNSGRSVSSGYAANPSVIAVAATDSNDARASYSNYGNYVDLVAPGVGI 185 (242)
T ss_pred CCCCCCchHHHHHHHHHHHHhhcCCeEEEEecCCCCCccCCCCcCCCCeEEEEEeCCCCCccCcCCCCCCeEEEeCcCCc
Confidence 9854444556777778888888 99999999999998877777789999999999999999999999998776 88888
Q ss_pred ccC---------CCCCCceeEEecccCCCCcCccccCCCCCC-CCCCCccc
Q 009592 382 TPY---------NLKKMHPLVYAADVVVPGVHQNETNQCLPG-SLTPEKVK 422 (531)
Q Consensus 382 ~~~---------~~~~~~~~~~gts~a~p~v~~~~a~~c~~~-~~~~~~~~ 422 (531)
... .+.+.|..+.|||||+|+|+|..|.+.+.. .+++++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~GTS~Aap~vaG~~All~~~~p~l~~~~i~ 236 (242)
T cd07498 186 WTTGTGRGSAGDYPGGGYGSFSGTSFASPVAAGVAALILSANPNLTPAEVE 236 (242)
T ss_pred ccCCccccccccCCCCceEeeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 766 346678889999999999999998776532 34444443
No 19
>cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=4.3e-35 Score=291.11 Aligned_cols=212 Identities=19% Similarity=0.159 Sum_probs=158.3
Q ss_pred cchhhhcc-cCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCC
Q 009592 131 MGQDLLSK-ARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPL 209 (531)
Q Consensus 131 ~~~~~~~~-~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~ 209 (531)
++.++|+. +..|+||+|+|||||||.+||||+++.... + .
T Consensus 3 ~~~~aw~~~~g~G~gV~VaviDtGid~~Hpdl~~~~~~~-----------------------------~-~--------- 43 (277)
T cd04843 3 NARYAWTKPGGSGQGVTFVDIEQGWNLNHEDLVGNGITL-----------------------------I-S--------- 43 (277)
T ss_pred ChHHHHHhcCCCCCcEEEEEecCCCCCCChhhccccccc-----------------------------c-C---------
Confidence 45789987 445999999999999999999997542100 0 0
Q ss_pred CCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHH
Q 009592 210 NATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAI 289 (531)
Q Consensus 210 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai 289 (531)
...+.|.++|||||||||+|. ++..| +.||||+|+|+++|+++ . . +++++|
T Consensus 44 -----~~~~~d~~gHGT~VAGiIaa~---------~n~~G-~~GvAp~a~l~~i~v~~--~--------~----~~~~ai 94 (277)
T cd04843 44 -----GLTDQADSDHGTAVLGIIVAK---------DNGIG-VTGIAHGAQAAVVSSTR--V--------S----NTADAI 94 (277)
T ss_pred -----CCCCCCCCCCcchhheeeeee---------cCCCc-eeeeccCCEEEEEEecC--C--------C----CHHHHH
Confidence 001456789999999999987 33333 57999999999999986 1 2 345566
Q ss_pred HHHHH----cCCcEEEEeccCCCCCC-----CcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCC-----------C--
Q 009592 290 DDAIR----DGVHVLSISIGTNQPFA-----FNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLS-----------N-- 347 (531)
Q Consensus 290 ~~a~~----~g~~VIn~S~G~~~~~~-----~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~-----------~-- 347 (531)
+||++ .++.+||||||...... .....+..+++++.++|+++|+||||++.+..... .
T Consensus 95 ~~A~~~~~~~~v~~in~s~g~~~~~~~~~p~~~~~~~~~av~~a~~~G~~vV~AAGN~~~~~~~~~~~~g~~~~~~~~~~ 174 (277)
T cd04843 95 LDAADYLSPGDVILLEMQTGGPNNGYPPLPVEYEQANFDAIRTATDLGIIVVEAAGNGGQDLDAPVYNRGPILNRFSPDF 174 (277)
T ss_pred HHHHhccCCCCEEEEEccccCCCcCcccCcchhhHHHHHHHHHHHhCCcEEEEeCCCCCccccCcccccccccccCCcCc
Confidence 66665 45678999999843221 12345566888999999999999999987532111 1
Q ss_pred CCCceeeeeccccCC--CcccceEeCCccee--eeeeeccCCCCCC----------ceeEEecccCCCCcCccccCC
Q 009592 348 LAPWLITVGAGSLDR--DFVGPVVLGTGMEI--IGKTVTPYNLKKM----------HPLVYAADVVVPGVHQNETNQ 410 (531)
Q Consensus 348 ~~~~vitVgA~~~~~--~~~~~~~~g~~~~~--~G~~i~~~~~~~~----------~~~~~gts~a~p~v~~~~a~~ 410 (531)
..+++|+|||++.+. .+..||++|..+++ ||+.|.++..+.. |..++|||||+|+|+|..+.+
T Consensus 175 ~~~~vI~VgA~~~~~~~~~~~fSn~G~~vdi~APG~~i~s~~~~~~~~~~~~~~~~~~~~sGTS~AaP~VaG~aALl 251 (277)
T cd04843 175 RDSGAIMVGAGSSTTGHTRLAFSNYGSRVDVYGWGENVTTTGYGDLQDLGGENQDYTDSFSGTSSASPIVAGAAASI 251 (277)
T ss_pred CCCCeEEEEeccCCCCCccccccCCCCccceEcCCCCeEecCCCCcccccCCCCcceeeecccchhhHHHHHHHHHH
Confidence 236899999998753 27899999998887 9999988776433 367899999999999998765
No 20
>cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=2.2e-34 Score=284.06 Aligned_cols=220 Identities=22% Similarity=0.205 Sum_probs=168.4
Q ss_pred ceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCCCC
Q 009592 144 DVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDG 223 (531)
Q Consensus 144 gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g 223 (531)
||+|||||||||++||+|.+... ..++|..+. ........|..+
T Consensus 1 GV~VaviDsGv~~~hp~l~~~~~---------------------------~~~~~~~~~---------~~~~~~~~d~~~ 44 (254)
T cd07490 1 GVTVAVLDTGVDADHPDLAGRVA---------------------------QWADFDENR---------RISATEVFDAGG 44 (254)
T ss_pred CCEEEEEeCCCCCCCcchhcccC---------------------------CceeccCCC---------CCCCCCCCCCCC
Confidence 79999999999999999975421 112221110 011234557789
Q ss_pred CCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 009592 224 HGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSIS 303 (531)
Q Consensus 224 HGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn~S 303 (531)
|||||||||+++. . .+...||||+++|+.+|++... .+..+++++||+|+++.+++|||||
T Consensus 45 HGT~vAgiia~~~---------~-~~~~~GvAp~a~i~~~~v~~~~---------~~~~~~~~~ai~~a~~~~~~Vin~S 105 (254)
T cd07490 45 HGTHVSGTIGGGG---------A-KGVYIGVAPEADLLHGKVLDDG---------GGSLSQIIAGMEWAVEKDADVVSMS 105 (254)
T ss_pred cHHHHHHHHhcCC---------C-CCCEEEECCCCEEEEEEEecCC---------CCcHHHHHHHHHHHHhCCCCEEEEC
Confidence 9999999999983 2 2345799999999999999865 4678899999999999999999999
Q ss_pred ccCCCCCCCcccHHHHHHHHHHh-CCcEEEEecCCCCCCCCCCCCCCCceeeeeccccCCCcccceEeCC----------
Q 009592 304 IGTNQPFAFNRDGIAIGALNAVK-HNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGT---------- 372 (531)
Q Consensus 304 ~G~~~~~~~~~~~~~~a~~~a~~-~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~g~---------- 372 (531)
||..... ...+..+++...+ +|+++|+||||+|.....++...+++|+|||++.......++++|.
T Consensus 106 ~g~~~~~---~~~~~~~~~~~~~~~g~lvV~aAGN~g~~~~~~pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~~~~~~ 182 (254)
T cd07490 106 LGGTYYS---EDPLEEAVEALSNQTGALFVVSAGNEGHGTSGSPGSAYAALSVGAVDRDDEDAWFSSFGSSGASLVSAPD 182 (254)
T ss_pred CCcCCCC---CcHHHHHHHHHHHcCCCEEEEeCCCCCCCCCCCCccCCceeEEecccccCCccCccCCcccccccccCCC
Confidence 9984322 5566666666654 6999999999999887777778899999999999888888886661
Q ss_pred -------ccee--eeeeecc----CCCCCCceeEEecccCCCCcCccccCCCCCC-CCCCCcc
Q 009592 373 -------GMEI--IGKTVTP----YNLKKMHPLVYAADVVVPGVHQNETNQCLPG-SLTPEKV 421 (531)
Q Consensus 373 -------~~~~--~G~~i~~----~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~-~~~~~~~ 421 (531)
..++ ||..+++ ....+.|..+.|||+|+|+|+|..+.+.+.. .+++.++
T Consensus 183 ~~~~~~~~~d~~apG~~i~~~~~~~~~~~~~~~~~GTS~AaP~vaG~aAl~~~~~p~~~~~~i 245 (254)
T cd07490 183 SPPDEYTKPDVAAPGVDVYSARQGANGDGQYTRLSGTSMAAPHVAGVAALLAAAHPDLSPEQI 245 (254)
T ss_pred CCccCCcCceEEeccCCeEccccCCCCCCCeeecccHHHHHHHHHHHHHHHHHHCCCCCHHHH
Confidence 1223 8888887 4557889999999999999999988776533 2344444
No 21
>cd05562 Peptidases_S53_like Peptidase domain in the S53 family. Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functi
Probab=100.00 E-value=1.7e-34 Score=286.61 Aligned_cols=207 Identities=21% Similarity=0.149 Sum_probs=151.3
Q ss_pred cCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCC
Q 009592 139 ARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSP 218 (531)
Q Consensus 139 ~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (531)
+++|+||+|||||||||.+||+|.+-.-+ ++.+...+... ....
T Consensus 1 g~tG~gv~vaviDtGvd~~~~~~~~~~~~-----------------------~l~~~~~~~~~-------------~~~~ 44 (275)
T cd05562 1 GVDGTGIKIGVISDGFDGLGDAADDQASG-----------------------DLPGNVNVLGD-------------LDGG 44 (275)
T ss_pred CCCCCceEEEEEeCCccccccccccccCC-----------------------CCCcceeeccc-------------cCCC
Confidence 57999999999999999999855321110 11111111110 1234
Q ss_pred CCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCc
Q 009592 219 RDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVH 298 (531)
Q Consensus 219 ~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~ 298 (531)
.|..+|||||||||+ ||||+|+|+.+|++ ...+++++||+|++++|++
T Consensus 45 ~d~~gHGT~vAgii~-------------------GvAP~a~l~~~~~~-------------~~~~~i~~ai~~a~~~g~~ 92 (275)
T cd05562 45 SGGGDEGRAMLEIIH-------------------DIAPGAELAFHTAG-------------GGELDFAAAIRALAAAGAD 92 (275)
T ss_pred CCCCchHHHHHHHHh-------------------ccCCCCEEEEEecC-------------CCHHHHHHHHHHHHHcCCC
Confidence 577899999999994 89999999988763 3378899999999999999
Q ss_pred EEEEeccCCCCCCCcccHHHHHHHHHHhC-CcEEEEecCCCCCCCC-CCCCCCCceeeeeccccCCCcccce--------
Q 009592 299 VLSISIGTNQPFAFNRDGIAIGALNAVKH-NILVACSAGNSGPAPS-SLSNLAPWLITVGAGSLDRDFVGPV-------- 368 (531)
Q Consensus 299 VIn~S~G~~~~~~~~~~~~~~a~~~a~~~-Gi~vV~AAGN~g~~~~-~~~~~~~~vitVgA~~~~~~~~~~~-------- 368 (531)
|||||||......+.+..+..+++++.++ |++||+||||+|.... ..++.+|+||+|||++..+....++
T Consensus 93 Vin~S~g~~~~~~~~~~~~~~ai~~a~~~~GvlvVaAAGN~g~~~~~~~Pa~~~~vitVgA~~~~~~~~~~s~~~~~~~~ 172 (275)
T cd05562 93 IIVDDIGYLNEPFFQDGPIAQAVDEVVASPGVLYFSSAGNDGQSGSIFGHAAAPGAIAVGAVDYGNTPAFGSDPAPGGTP 172 (275)
T ss_pred EEEecccccCCCcccCCHHHHHHHHHHHcCCcEEEEeCCCCCCCCCccCCCCCCCeEEEEeeccCCCcccccccccCCCc
Confidence 99999998433323345677888888887 9999999999998543 3456789999999999877655332
Q ss_pred ----EeCC---------ccee--ee-eeeccCCCCCCceeEEecccCCCCcCccccCCCCC
Q 009592 369 ----VLGT---------GMEI--IG-KTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLP 413 (531)
Q Consensus 369 ----~~g~---------~~~~--~G-~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~ 413 (531)
+++. ..++ || ..+.+...++.|..++|||||+|+|+|..+++.+.
T Consensus 173 s~~~~~~~~~p~~~~~~~~di~Apgg~~~~~~~~~~~~~~~sGTS~AaP~VaG~aALl~~~ 233 (275)
T cd05562 173 SSFDPVGIRLPTPEVRQKPDVTAPDGVNGTVDGDGDGPPNFFGTSAAAPHAAGVAALVLSA 233 (275)
T ss_pred ccccCCcccCcCCCCCcCCeEEcCCcccccCCCcCCceeecccchHHHHHHHHHHHHHHHh
Confidence 2221 2334 53 33444555778999999999999999999877653
No 22
>cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.5e-33 Score=279.63 Aligned_cols=219 Identities=23% Similarity=0.311 Sum_probs=173.6
Q ss_pred CCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCC
Q 009592 142 GQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDM 221 (531)
Q Consensus 142 G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 221 (531)
|+||+|+|||||||++||+|.+.... .+.+.... .......|.
T Consensus 1 G~gv~VaviDsGv~~~h~~l~~~~~~---------------------------~~~~~~~~----------~~~~~~~d~ 43 (264)
T cd07487 1 GKGITVAVLDTGIDAPHPDFDGRIIR---------------------------FADFVNTV----------NGRTTPYDD 43 (264)
T ss_pred CCCcEEEEEeCCCCCCCccccccccc---------------------------cccccccc----------cCCCCCCCC
Confidence 89999999999999999999765321 00111000 012345567
Q ss_pred CCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHc----CC
Q 009592 222 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD----GV 297 (531)
Q Consensus 222 ~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~----g~ 297 (531)
.+|||||||+|+|... +..+.+.||||+|+|+.+|+++..+ .+..+++++||+|+++. ++
T Consensus 44 ~~HGT~vAgiiag~~~--------~~~~~~~Giap~a~i~~~~v~~~~~--------~~~~~~~~~ai~~~~~~~~~~~~ 107 (264)
T cd07487 44 NGHGTHVAGIIAGSGR--------ASNGKYKGVAPGANLVGVKVLDDSG--------SGSESDIIAGIDWVVENNEKYNI 107 (264)
T ss_pred CCchHHHHHHHhcCCc--------ccCCceEEECCCCeEEEEEeecCCC--------CccHHHHHHHHHHHHhhccccCc
Confidence 8999999999998832 1134568999999999999998876 67789999999999998 99
Q ss_pred cEEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC--CCCCCCCceeeeeccccCCC----cccceEeC
Q 009592 298 HVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS--SLSNLAPWLITVGAGSLDRD----FVGPVVLG 371 (531)
Q Consensus 298 ~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~--~~~~~~~~vitVgA~~~~~~----~~~~~~~g 371 (531)
+|||||||.........+.+..+++++.++|+++|+||||+|.... ..+...+++|+|||++.+.. ...|+++|
T Consensus 108 ~Iin~S~g~~~~~~~~~~~~~~~~~~~~~~gilvv~aaGN~~~~~~~~~~p~~~~~vi~Vga~~~~~~~~~~~~~~s~~G 187 (264)
T cd07487 108 RVVNLSLGAPPDPSYGEDPLCQAVERLWDAGIVVVVAAGNSGPGPGTITSPGNSPKVITVGAVDDNGPHDDGISYFSSRG 187 (264)
T ss_pred eEEEeccCCCCCCCCCCCHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCCcccCCCceEEEeccCCCCCCccccccccCC
Confidence 9999999995444566788888999999999999999999998765 45567899999999998877 67888887
Q ss_pred Ccc------ee--eeeeeccC---------CCCCCceeEEecccCCCCcCccccCCCCC
Q 009592 372 TGM------EI--IGKTVTPY---------NLKKMHPLVYAADVVVPGVHQNETNQCLP 413 (531)
Q Consensus 372 ~~~------~~--~G~~i~~~---------~~~~~~~~~~gts~a~p~v~~~~a~~c~~ 413 (531)
+.. ++ ||..+.+. .....|..+.|||+|+|.|+|..+.+.+.
T Consensus 188 ~~~~~~~~~di~apG~~i~~~~~~~~~~~~~~~~~~~~~~GTS~Aap~vaG~~All~~~ 246 (264)
T cd07487 188 PTGDGRIKPDVVAPGENIVSCRSPGGNPGAGVGSGYFEMSGTSMATPHVSGAIALLLQA 246 (264)
T ss_pred CCCCCCcCCCEEccccceEeccccccccCCCCCCceEeccccchHHHHHHHHHHHHHHH
Confidence 542 23 88888773 34677889999999999999988877553
No 23
>cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins. This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thoug
Probab=100.00 E-value=9.7e-34 Score=275.02 Aligned_cols=210 Identities=23% Similarity=0.276 Sum_probs=172.1
Q ss_pred ceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCCCC
Q 009592 144 DVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDG 223 (531)
Q Consensus 144 gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g 223 (531)
||+|||||+||+++||+|.+... ..++|... ....+.|..+
T Consensus 1 gv~V~iiDsGv~~~h~~l~~~~~---------------------------~~~~~~~~------------~~~~~~~~~~ 41 (229)
T cd07477 1 GVKVAVIDTGIDSSHPDLKLNIV---------------------------GGANFTGD------------DNNDYQDGNG 41 (229)
T ss_pred CCEEEEEcCCCCCCChhHhcccc---------------------------CcccccCC------------CCCCCCCCCC
Confidence 79999999999999999975421 11222211 0024557789
Q ss_pred CCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 009592 224 HGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSIS 303 (531)
Q Consensus 224 HGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn~S 303 (531)
|||||||+|++.. ... .+.|+||+|+|+.+|+++..+ .....+++++++|+++.|++|||||
T Consensus 42 HGT~vA~ii~~~~---------~~~-~~~giap~a~i~~~~~~~~~~--------~~~~~~l~~ai~~a~~~~~~Vin~S 103 (229)
T cd07477 42 HGTHVAGIIAALD---------NGV-GVVGVAPEADLYAVKVLNDDG--------SGTYSDIIAGIEWAIENGMDIINMS 103 (229)
T ss_pred CHHHHHHHHhccc---------CCC-ccEeeCCCCEEEEEEEECCCC--------CcCHHHHHHHHHHHHHCCCCEEEEC
Confidence 9999999999872 222 457999999999999998775 5677899999999999999999999
Q ss_pred ccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCC--CCCCCceeeeeccccCCCcccceEeCCccee--eee
Q 009592 304 IGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSL--SNLAPWLITVGAGSLDRDFVGPVVLGTGMEI--IGK 379 (531)
Q Consensus 304 ~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~--~~~~~~vitVgA~~~~~~~~~~~~~g~~~~~--~G~ 379 (531)
||... ....+..+++.+.++|+++|+||||++...... ++..+++|+||+++.+.....++++|...++ ||.
T Consensus 104 ~g~~~----~~~~~~~~~~~a~~~giliv~aaGN~~~~~~~~~~pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~apg~ 179 (229)
T cd07477 104 LGGPS----DSPALREAIKKAYAAGILVVAAAGNSGNGDSSYDYPAKYPSVIAVGAVDSNNNRASFSSTGPEVELAAPGV 179 (229)
T ss_pred CccCC----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCccCCCCCCCEEEEEeecCCCCcCCccCCCCCceEEeCCC
Confidence 99832 234566677889999999999999999876664 7788999999999999999999999988776 899
Q ss_pred eeccCCCCCCceeEEecccCCCCcCccccCCCCCC
Q 009592 380 TVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPG 414 (531)
Q Consensus 380 ~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~ 414 (531)
.+.+..+.+.|..+.|||+|+|++++..+.+.+..
T Consensus 180 ~i~~~~~~~~~~~~~GTS~Aap~vag~~All~~~~ 214 (229)
T cd07477 180 DILSTYPNNDYAYLSGTSMATPHVAGVAALVWSKR 214 (229)
T ss_pred CeEEecCCCCEEEEccHHHHHHHHHHHHHHHHHhC
Confidence 99888877889999999999999999988776543
No 24
>cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1e-33 Score=285.56 Aligned_cols=219 Identities=21% Similarity=0.267 Sum_probs=158.2
Q ss_pred ccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCC
Q 009592 138 KARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRS 217 (531)
Q Consensus 138 ~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (531)
.+++|+||+|||||||||.+||+|.+... ...+|.+. ..
T Consensus 3 ~~~tG~gv~VaVlDsGv~~~hp~l~~~~~---------------------------~~~~~~~~--------------~~ 41 (297)
T cd07480 3 SPFTGAGVRVAVLDTGIDLTHPAFAGRDI---------------------------TTKSFVGG--------------ED 41 (297)
T ss_pred CCCCCCCCEEEEEcCCCCCCChhhcCCcc---------------------------cCcccCCC--------------CC
Confidence 47899999999999999999999975421 11112111 12
Q ss_pred CCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCC
Q 009592 218 PRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGV 297 (531)
Q Consensus 218 ~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~ 297 (531)
+.|..+|||||||||+|+. .. +...||||+|+|+.+|++.... ......+++||+|+++.|+
T Consensus 42 ~~d~~gHGT~VAgiiag~~---------~~-~~~~GvAp~a~i~~~~~~~~~~--------~~~~~~i~~ai~~a~~~g~ 103 (297)
T cd07480 42 VQDGHGHGTHCAGTIFGRD---------VP-GPRYGVARGAEIALIGKVLGDG--------GGGDGGILAGIQWAVANGA 103 (297)
T ss_pred CCCCCCcHHHHHHHHhccc---------CC-CcccccCCCCEEEEEEEEeCCC--------CCcHHHHHHHHHHHHHcCC
Confidence 4578899999999999873 21 2346999999999999998765 6777789999999999999
Q ss_pred cEEEEeccCCCC---------CCCcccHHHHHHHHH---------------HhCCcEEEEecCCCCCCCCCCC-----C-
Q 009592 298 HVLSISIGTNQP---------FAFNRDGIAIGALNA---------------VKHNILVACSAGNSGPAPSSLS-----N- 347 (531)
Q Consensus 298 ~VIn~S~G~~~~---------~~~~~~~~~~a~~~a---------------~~~Gi~vV~AAGN~g~~~~~~~-----~- 347 (531)
+|||||||.... .......++...+.+ .++|++||+||||+|....... .
T Consensus 104 ~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~gvlvV~aAGN~g~~~~~~~~~~~~~~ 183 (297)
T cd07480 104 DVISMSLGADFPGLVDQGWPPGLAFSRALEAYRQRARLFDALMTLVAAQAALARGTLIVAAAGNESQRPAGIPPVGNPAA 183 (297)
T ss_pred CEEEeccCCCCcccccccCCCCchhHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCceEEEecCCCCCCCCCCCCccCccc
Confidence 999999998431 111122333333333 7899999999999986543222 1
Q ss_pred --CCCceeeeeccccCCCcccceEeCC-ccee--eeeeeccCCCCCCceeEEecccCCCCcCccccCCCCCCC
Q 009592 348 --LAPWLITVGAGSLDRDFVGPVVLGT-GMEI--IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGS 415 (531)
Q Consensus 348 --~~~~vitVgA~~~~~~~~~~~~~g~-~~~~--~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~~ 415 (531)
....|++|++.+....+....+++. ..++ ||+.+.++..++.|..++|||||+|+|+|..+++.+..+
T Consensus 184 ~~~~~~V~~V~~~~~~~~~~~~~~~~~~~~dv~ApG~~i~s~~~~~~~~~~sGTS~AaP~VaG~aAll~~~~p 256 (297)
T cd07480 184 CPSAMGVAAVGALGRTGNFSAVANFSNGEVDIAAPGVDIVSAAPGGGYRSMSGTSMATPHVAGVAALWAEALP 256 (297)
T ss_pred cccccEEEEECCCCCCCCccccCCCCCCceEEEeCCCCeEeecCCCcEEEeCcHHHHHHHHHHHHHHHHHhCc
Confidence 2345566666554444433333322 3444 999999888889999999999999999999988776443
No 25
>cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.5e-33 Score=278.92 Aligned_cols=240 Identities=22% Similarity=0.259 Sum_probs=177.2
Q ss_pred CceEEEEeecccCCCCCCCcCCCCCCC-CCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCC
Q 009592 143 QDVIVGLVDNGVWPESKSFSDEGMGPV-PKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDM 221 (531)
Q Consensus 143 ~gv~VaViDtGid~~Hp~f~~~~~~~~-~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 221 (531)
+||+|+|||||||++||+|.++..... ...+.+....+.+|. +.. .+|+.. .....+.|.
T Consensus 2 ~~v~V~iiDtGid~~h~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~~~-------~~~~~~~d~ 62 (259)
T cd07473 2 GDVVVAVIDTGVDYNHPDLKDNMWVNPGEIPGNGIDDDGNGYV-----DDI-------YGWNFV-------NNDNDPMDD 62 (259)
T ss_pred CCCEEEEEeCCCCCCChhhccccccCcccccccCcccCCCCcc-----cCC-------Cccccc-------CCCCCCCCC
Confidence 689999999999999999987532100 000111100011110 000 011111 122356788
Q ss_pred CCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEEE
Q 009592 222 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 301 (531)
Q Consensus 222 ~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn 301 (531)
.+|||||||||+|. +.....+.||||+|+|+.+|++...+ .+...+++++|+|+++.+++|||
T Consensus 63 ~~HGT~va~ii~~~---------~~~~~~~~GvAp~a~l~~~~~~~~~~--------~~~~~~~~~a~~~a~~~~~~vin 125 (259)
T cd07473 63 NGHGTHVAGIIGAV---------GNNGIGIAGVAWNVKIMPLKFLGADG--------SGTTSDAIKAIDYAVDMGAKIIN 125 (259)
T ss_pred CCcHHHHHHHHHCc---------CCCCCceEEeCCCCEEEEEEEeCCCC--------CcCHHHHHHHHHHHHHCCCeEEE
Confidence 99999999999988 33333457999999999999998775 68889999999999999999999
Q ss_pred EeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCC---CCCCC--CCCceeeeeccccCCCcccceEeCCc-ce
Q 009592 302 ISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP---SSLSN--LAPWLITVGAGSLDRDFVGPVVLGTG-ME 375 (531)
Q Consensus 302 ~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~---~~~~~--~~~~vitVgA~~~~~~~~~~~~~g~~-~~ 375 (531)
+|||.... ...+..+++++.++|+++|+||||+|... ..++. ..+++|+||+++.......++++|.. .+
T Consensus 126 ~S~G~~~~----~~~~~~~~~~~~~~g~ivV~aaGN~g~~~~~~~~~p~~~~~~~vi~Vga~~~~~~~~~~s~~g~~~~~ 201 (259)
T cd07473 126 NSWGGGGP----SQALRDAIARAIDAGILFVAAAGNDGTNNDKTPTYPASYDLDNIISVAATDSNDALASFSNYGKKTVD 201 (259)
T ss_pred eCCCCCCC----CHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcCcCcccCCCCeEEEEecCCCCCcCcccCCCCCCcE
Confidence 99999433 56677788899999999999999999762 33443 35899999999999998889999864 34
Q ss_pred e--eeeeeccCCCCCCceeEEecccCCCCcCccccCCCCCCC-CCCCccc
Q 009592 376 I--IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGS-LTPEKVK 422 (531)
Q Consensus 376 ~--~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~~-~~~~~~~ 422 (531)
+ ||..+++..+.+.|..+.|||+|+|.|+|..+.+.+..+ +.+.+++
T Consensus 202 ~~apG~~~~~~~~~~~~~~~~GTS~AaP~vaG~~All~~~~~~~t~~~v~ 251 (259)
T cd07473 202 LAAPGVDILSTSPGGGYGYMSGTSMATPHVAGAAALLLSLNPNLTAAQIK 251 (259)
T ss_pred EEeccCCeEeccCCCcEEEeccHhHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 4 899988877788899999999999999999988866433 3444443
No 26
>cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II. Tripeptidyl aminopeptidases II are member of the peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Tripeptidyl aminopeptidase II removes tripeptides from the free N terminus of oligopeptides as well as having endoproteolytic activity. Some tripeptidyl aminopeptidases have been shown to cleave tripeptides and small peptides, e.g. angiotensin II and glucagon, while others are believed to be involved in MHC I processing.
Probab=100.00 E-value=5.2e-33 Score=285.70 Aligned_cols=178 Identities=21% Similarity=0.185 Sum_probs=133.4
Q ss_pred CCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCc
Q 009592 219 RDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVH 298 (531)
Q Consensus 219 ~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~ 298 (531)
.|+.+|||||||||+|+ +.....+.||||+|+|+++|+++..... ......+++||++|++.|++
T Consensus 182 ~d~~gHGThVAGIIAg~---------~~~~~~~~GVAP~A~I~svkv~d~~~gs------~~t~~~l~~ai~~ai~~gad 246 (412)
T cd04857 182 TDSGAHGTHVAGIAAAH---------FPEEPERNGVAPGAQIVSIKIGDTRLGS------METGTALVRAMIAAIETKCD 246 (412)
T ss_pred CCCCCCHHHHHHHHhCC---------CCCCCceEEecCCCeEEEEEeccCCCCC------ccchHHHHHHHHHHHHcCCC
Confidence 47789999999999998 2233456899999999999998754210 23346799999999999999
Q ss_pred EEEEeccCCCCCCCcccHHHHHH-HHHHhCCcEEEEecCCCCCCCCCCCC---CCCceeeeeccccC-------------
Q 009592 299 VLSISIGTNQPFAFNRDGIAIGA-LNAVKHNILVACSAGNSGPAPSSLSN---LAPWLITVGAGSLD------------- 361 (531)
Q Consensus 299 VIn~S~G~~~~~~~~~~~~~~a~-~~a~~~Gi~vV~AAGN~g~~~~~~~~---~~~~vitVgA~~~~------------- 361 (531)
|||||||........ ..+..++ +.+.++|+++|+||||+|+..+++.. .+++||+|||+...
T Consensus 247 VIN~SlG~~~~~~~~-~~~~~~~~~~~~~~GVlvVaAAGN~G~~~~tv~~P~~~~~~VIsVGA~~~~~~~~~~y~~~~~~ 325 (412)
T cd04857 247 LINMSYGEATHWPNS-GRIIELMNEAVNKHGVIFVSSAGNNGPALSTVGAPGGTTSSVIGVGAYVSPEMMAAEYSLREKL 325 (412)
T ss_pred EEEecCCcCCCCccc-hHHHHHHHHHHHhCCCEEEEECCCCCCCccccCCccccCCCeEEEcceeccCcccccccccccc
Confidence 999999984322111 2233333 34567999999999999988776543 46899999997532
Q ss_pred -CCcccceEeCCc------cee--eeeeeccCC--CCCCceeEEecccCCCCcCccccCCCC
Q 009592 362 -RDFVGPVVLGTG------MEI--IGKTVTPYN--LKKMHPLVYAADVVVPGVHQNETNQCL 412 (531)
Q Consensus 362 -~~~~~~~~~g~~------~~~--~G~~i~~~~--~~~~~~~~~gts~a~p~v~~~~a~~c~ 412 (531)
.....||++|+. .++ ||..|.+.. ....|.+++|||||+|||+|.+|++.+
T Consensus 326 ~~~~~~fSSrGP~~dG~~~pdI~APG~~I~s~p~~~~~~~~~~sGTSmAaP~VAG~aALllS 387 (412)
T cd04857 326 PGNQYTWSSRGPTADGALGVSISAPGGAIASVPNWTLQGSQLMNGTSMSSPNACGGIALLLS 387 (412)
T ss_pred CCccccccccCCcccCCcCceEEeCCCcEEEcccCCCCCeEEecccHHHHHHHHHHHHHHHh
Confidence 234568888875 234 898887643 246789999999999999999987754
No 27
>cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=3.2e-33 Score=280.83 Aligned_cols=210 Identities=20% Similarity=0.195 Sum_probs=153.0
Q ss_pred cchhhhcccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCC
Q 009592 131 MGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLN 210 (531)
Q Consensus 131 ~~~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~ 210 (531)
++.++|+.+++|+||+|||||||||.+|| |.+..+ .+ ++ .+..+
T Consensus 9 ~~~~~~~~G~~G~Gv~VaViDTGv~~~h~-~~~~~~-------~~---------------~~----~~~~~--------- 52 (298)
T cd07494 9 NATRVHQRGITGRGVRVAMVDTGFYAHPF-FESRGY-------QV---------------RV----VLAPG--------- 52 (298)
T ss_pred ChhHHHhcCCCCCCcEEEEEeCCCcCCch-hhcCCc-------cc---------------ee----ecCCC---------
Confidence 55899999999999999999999999998 654321 00 00 00000
Q ss_pred CCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHH
Q 009592 211 ATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAID 290 (531)
Q Consensus 211 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~ 290 (531)
......|..||||||||++ .||||+|+|+.+|++++ ..+.+++||+
T Consensus 53 ---~~~~~~D~~gHGT~vag~i-------------------~GvAP~a~i~~vkv~~~------------~~~~~~~ai~ 98 (298)
T cd07494 53 ---ATDPACDENGHGTGESANL-------------------FAIAPGAQFIGVKLGGP------------DLVNSVGAFK 98 (298)
T ss_pred ---CCCCCCCCCCcchheeece-------------------eEeCCCCeEEEEEccCC------------CcHHHHHHHH
Confidence 0123457889999999876 39999999999999864 3467899999
Q ss_pred HHHHcCCcEEEEeccCCCCCC---------CcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceeeeecccc-
Q 009592 291 DAIRDGVHVLSISIGTNQPFA---------FNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSL- 360 (531)
Q Consensus 291 ~a~~~g~~VIn~S~G~~~~~~---------~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~- 360 (531)
||+++|++|||||||...... .....+..++++|.++|++||+||||++. .+++..|+||+|||++.
T Consensus 99 ~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~~al~~ai~~A~~~Gi~vVaAAGN~~~---~~Pa~~p~viaVga~~~~ 175 (298)
T cd07494 99 KAISLSPDIISNSWGYDLRSPGTSWSRSLPNALKALAATLQDAVARGIVVVFSAGNGGW---SFPAQHPEVIAAGGVFVD 175 (298)
T ss_pred HHHhcCCCEEEeecccCCCCcccccccccchhhHHHHHHHHHHHHCCcEEEEeCCCCCC---CcCCCCCCEEEEEeEecc
Confidence 999999999999999843221 12345778889999999999999999974 56888999999999843
Q ss_pred -CCCc--ccce-EeC----Ccc---e------------------eeeeeecc--------CCCCCCceeEEecccCCCCc
Q 009592 361 -DRDF--VGPV-VLG----TGM---E------------------IIGKTVTP--------YNLKKMHPLVYAADVVVPGV 403 (531)
Q Consensus 361 -~~~~--~~~~-~~g----~~~---~------------------~~G~~i~~--------~~~~~~~~~~~gts~a~p~v 403 (531)
++.. ..++ .+. ++. + -||..|.. +.+++.|..++|||||+|||
T Consensus 176 ~~g~~~~~~~~~~~~s~~~~g~~~pd~~~~~g~~~~~~~~~~~~APG~~i~~~~~~~~~~~~~~~~y~~~sGTS~Aap~v 255 (298)
T cd07494 176 EDGARRASSYASGFRSKIYPGRQVPDVCGLVGMLPHAAYLMLPVPPGSQLDRSCAAFPDGTPPNDGWGVFSGTSAAAPQV 255 (298)
T ss_pred CCCcccccccccCcccccCCCCccCccccccCcCCcccccccccCCCcceeccccCCCCCCCCCCCeEeeccchHHHHHH
Confidence 2221 1111 111 010 0 16666632 23366799999999999999
Q ss_pred CccccCCCCC
Q 009592 404 HQNETNQCLP 413 (531)
Q Consensus 404 ~~~~a~~c~~ 413 (531)
+|.++++.+.
T Consensus 256 aG~aAll~~~ 265 (298)
T cd07494 256 AGVCALMLQA 265 (298)
T ss_pred HHHHHHHHHh
Confidence 9999888653
No 28
>cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases. Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases
Probab=100.00 E-value=5.4e-33 Score=279.93 Aligned_cols=229 Identities=22% Similarity=0.197 Sum_probs=168.5
Q ss_pred ccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCC
Q 009592 138 KARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRS 217 (531)
Q Consensus 138 ~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (531)
.+++|+||+|||||||||++||+|.+.... +.. ..++++.....+.. .
T Consensus 2 ~g~tG~gv~VaviDtGi~~~hp~l~~~~~~------------~~~----~~~~~~~~~~~~~~----------------~ 49 (293)
T cd04842 2 LGLTGKGQIVGVADTGLDTNHCFFYDPNFN------------KTN----LFHRKIVRYDSLSD----------------T 49 (293)
T ss_pred CCcCCcCCEEEEEecCCCCCCCcccCCCcC------------cCc----cCcccEEEeeccCC----------------C
Confidence 489999999999999999999999765320 011 12334443333221 2
Q ss_pred CCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCC
Q 009592 218 PRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGV 297 (531)
Q Consensus 218 ~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~ 297 (531)
..|..+|||||||||+|...+... ...+.||||+|+|+.+|++...+. ......+..+++++.+.++
T Consensus 50 ~~d~~~HGT~vAgiia~~~~~~~~------~~~~~GvAp~a~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 116 (293)
T cd04842 50 KDDVDGHGTHVAGIIAGKGNDSSS------ISLYKGVAPKAKLYFQDIGDTSGN-------LSSPPDLNKLFSPMYDAGA 116 (293)
T ss_pred CCCCCCCcchhheeeccCCcCCCc------ccccccccccCeEEEEEeeccCcc-------ccCCccHHHHHHHHHHhCC
Confidence 227899999999999998322100 014579999999999999987642 3566778999999999999
Q ss_pred cEEEEeccCCCCCCCcccHHHHHHHHHH-h-CCcEEEEecCCCCCCCC---CCCCCCCceeeeeccccCCC---------
Q 009592 298 HVLSISIGTNQPFAFNRDGIAIGALNAV-K-HNILVACSAGNSGPAPS---SLSNLAPWLITVGAGSLDRD--------- 363 (531)
Q Consensus 298 ~VIn~S~G~~~~~~~~~~~~~~a~~~a~-~-~Gi~vV~AAGN~g~~~~---~~~~~~~~vitVgA~~~~~~--------- 363 (531)
+|||||||..... .......++.++. + +|+++|+||||+|.... ..+..++++|+|||++....
T Consensus 117 ~Vin~S~G~~~~~--~~~~~~~~~~~~~~~~~g~lvV~aAGN~g~~~~~~~~~pa~~~~vi~Vga~~~~~~~~~~~~~~~ 194 (293)
T cd04842 117 RISSNSWGSPVNN--GYTLLARAYDQFAYNNPDILFVFSAGNDGNDGSNTIGSPATAKNVLTVGASNNPSVSNGEGGLGQ 194 (293)
T ss_pred EEEeccCCCCCcc--ccchHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccccCcccccceEEEeeccCCCcccccccccc
Confidence 9999999994332 1223333444333 3 89999999999998765 55667899999999998776
Q ss_pred ------cccceEeCCcc------ee--eeeeeccCC---------CCCCceeEEecccCCCCcCccccCCCCC
Q 009592 364 ------FVGPVVLGTGM------EI--IGKTVTPYN---------LKKMHPLVYAADVVVPGVHQNETNQCLP 413 (531)
Q Consensus 364 ------~~~~~~~g~~~------~~--~G~~i~~~~---------~~~~~~~~~gts~a~p~v~~~~a~~c~~ 413 (531)
+..|+++|... ++ ||..+.+.. ....|....|||+|+|+|++..+++.+.
T Consensus 195 ~~~~~~~~~~S~~G~~~~~~~~pdv~ApG~~i~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~VaG~aAll~~~ 267 (293)
T cd04842 195 SDNSDTVASFSSRGPTYDGRIKPDLVAPGTGILSARSGGGGIGDTSDSAYTSKSGTSMATPLVAGAAALLRQY 267 (293)
T ss_pred cCCCCccccccCcCCCCCCCcCCCEECCCCCeEeccCCCCCCCCCChhheeecCcHHHHHHHHHHHHHHHHHH
Confidence 77888888643 34 888887763 2567888999999999999999877653
No 29
>cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases. Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family h
Probab=100.00 E-value=6.1e-33 Score=279.66 Aligned_cols=224 Identities=20% Similarity=0.196 Sum_probs=160.2
Q ss_pred ceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCCCC
Q 009592 144 DVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDG 223 (531)
Q Consensus 144 gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g 223 (531)
.|+|||||||||++||+|++.... ..+.+...............+.....|..|
T Consensus 1 ~V~VaviDtGi~~~hp~l~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g 54 (294)
T cd07482 1 KVTVAVIDSGIDPDHPDLKNSISS--------------------------YSKNLVPKGGYDGKEAGETGDINDIVDKLG 54 (294)
T ss_pred CcEEEEEeCCCCCCChhHhhcccc--------------------------cccccccCCCcCCccccccCCCCcCCCCCC
Confidence 389999999999999999853210 000000000000000000011234567899
Q ss_pred CCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 009592 224 HGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSIS 303 (531)
Q Consensus 224 HGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn~S 303 (531)
|||||||+|+|. ++ ..||||+|+|+.+|+++..+ .....++++||+||++.+++|||||
T Consensus 55 HGT~vAgiia~~---------~~----~~GvAp~a~i~~~~v~~~~~--------~~~~~~~~~ai~~a~~~~~~vin~S 113 (294)
T cd07482 55 HGTAVAGQIAAN---------GN----IKGVAPGIGIVSYRVFGSCG--------SAESSWIIKAIIDAADDGVDVINLS 113 (294)
T ss_pred cHhHHHHHHhcC---------CC----CceeCCCCEEEEEEeecCCC--------CcCHHHHHHHHHHHHHCCCCEEEeC
Confidence 999999999987 22 24999999999999998775 4578899999999999999999999
Q ss_pred ccCCCCCCC-------cccHHHHHHHHHHhCCcEEEEecCCCCCCC----------------------CCCCCCCCceee
Q 009592 304 IGTNQPFAF-------NRDGIAIGALNAVKHNILVACSAGNSGPAP----------------------SSLSNLAPWLIT 354 (531)
Q Consensus 304 ~G~~~~~~~-------~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----------------------~~~~~~~~~vit 354 (531)
||....... ..+.+..+++.+.++|++||+||||+|... ...+...+++|+
T Consensus 114 ~G~~~~~~~~~~~~~~~~~~~~~~i~~a~~~g~lvv~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vi~ 193 (294)
T cd07482 114 LGGYLIIGGEYEDDDVEYNAYKKAINYAKSKGSIVVAAAGNDGLDVSNKQELLDFLSSGDDFSVNGEVYDVPASLPNVIT 193 (294)
T ss_pred CccCCCCCcccccchhhhHHHHHHHHHHHHCCCEEEEeCCCCCcccccccccccccccccccccCCcceecccccCceEE
Confidence 998432211 124566677888899999999999999654 123346789999
Q ss_pred eeccccCCCcccceEeCCc-cee--eeeeecc----------------------CCCCCCceeEEecccCCCCcCccccC
Q 009592 355 VGAGSLDRDFVGPVVLGTG-MEI--IGKTVTP----------------------YNLKKMHPLVYAADVVVPGVHQNETN 409 (531)
Q Consensus 355 VgA~~~~~~~~~~~~~g~~-~~~--~G~~i~~----------------------~~~~~~~~~~~gts~a~p~v~~~~a~ 409 (531)
|||++.++....|+++|.. .++ ||..+.. ....+.|..++|||||+|+|+|..+.
T Consensus 194 Vga~~~~~~~~~~S~~g~~~~~~~apG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~VaG~aAl 273 (294)
T cd07482 194 VSATDNNGNLSSFSNYGNSRIDLAAPGGDFLLLDQYGKEKWVNNGLMTKEQILTTAPEGGYAYMYGTSLAAPKVSGALAL 273 (294)
T ss_pred EEeeCCCCCcCccccCCCCcceEECCCCCcccccccCccccccccccccceeeecccCCceEeecchhhhhHHHHHHHHH
Confidence 9999999998889888753 333 6655531 12356788899999999999999987
Q ss_pred CCCCC
Q 009592 410 QCLPG 414 (531)
Q Consensus 410 ~c~~~ 414 (531)
+.+..
T Consensus 274 l~~~~ 278 (294)
T cd07482 274 IIDKN 278 (294)
T ss_pred HHHHC
Confidence 76543
No 30
>cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins. GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure
Probab=100.00 E-value=4.9e-33 Score=294.03 Aligned_cols=258 Identities=23% Similarity=0.193 Sum_probs=180.3
Q ss_pred CCCCceEEEEeecccCCCCCCCcCC-CCCCCCCCccccccccCCcCcccCCceeeeEEecccc-cccccCCCCCCCCCCC
Q 009592 140 RYGQDVIVGLVDNGVWPESKSFSDE-GMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKG-FEQLYGPLNATEDDRS 217 (531)
Q Consensus 140 ~~G~gv~VaViDtGid~~Hp~f~~~-~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~-~~~~~~~~~~~~~~~~ 217 (531)
++|+||+|||||||||+.||+|++. +.+++...|+.....+.. .....+...+... .+...... ...+...
T Consensus 1 ltG~GV~VaVIDtGId~~hp~F~~~dg~tRi~~~wDq~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~-~p~~~~~ 73 (455)
T cd07478 1 LTGKGVLVGIIDTGIDYLHPEFRNEDGTTRILYIWDQTIPGGPP------PGGYYGGGEYTEEIINAALASD-NPYDIVP 73 (455)
T ss_pred CCCCceEEEEEECCCCCCCHHHccCCCCchhHHhhhCcCCCCCC------CccccCceEEeHHHHHHHHhcC-CccccCc
Confidence 4799999999999999999999854 233444556543332111 1111111111110 00000000 0011224
Q ss_pred CCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCc--cCCCCCCHHHHHHHHHHHHHc
Q 009592 218 PRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASK--AAGNTCFEADMLAAIDDAIRD 295 (531)
Q Consensus 218 ~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~--~~~~~~~~~~i~~ai~~a~~~ 295 (531)
..|..||||||||||||+ +.....+.||||+|+|+++|++...+.... .....+..+++++||+|+++.
T Consensus 74 ~~D~~GHGThvAGIiag~---------~~~~~~~~GvAp~a~l~~vk~~~~~~~~~~~~~~~~~~~~~~i~~ai~~~~~~ 144 (455)
T cd07478 74 SRDENGHGTHVAGIAAGN---------GDNNPDFKGVAPEAELIVVKLKQAKKYLREFYEDVPFYQETDIMLAIKYLYDK 144 (455)
T ss_pred CCCCCCchHHHHHHHhcC---------CCCCCCccccCCCCcEEEEEeecCCCcccccccccccCcHHHHHHHHHHHHHH
Confidence 468899999999999998 333345689999999999999987752000 000026788999999999875
Q ss_pred -----CCcEEEEeccCCCCCCCcccHHHHHHHHHHhC-CcEEEEecCCCCCCC---------------------------
Q 009592 296 -----GVHVLSISIGTNQPFAFNRDGIAIGALNAVKH-NILVACSAGNSGPAP--------------------------- 342 (531)
Q Consensus 296 -----g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~-Gi~vV~AAGN~g~~~--------------------------- 342 (531)
.+.|||||||..........+++.+++.+.++ |++||+||||+|...
T Consensus 145 a~~~~~p~VInlSlG~~~g~~~g~~~l~~~i~~~~~~~gv~vV~aaGNeg~~~~h~~~~~~~~~~~~~ie~~v~~~~~~~ 224 (455)
T cd07478 145 ALELNKPLVINISLGTNFGSHDGTSLLERYIDAISRLRGIAVVVGAGNEGNTQHHHSGGIVPNGETKTVELNVGEGEKGF 224 (455)
T ss_pred HHHhCCCeEEEEccCcCCCCCCCccHHHHHHHHHHhhCCeEEEEeCCCCCCcCCceeeeeccCCceEEEEEEECCCCcce
Confidence 46899999999666667778888888887776 999999999999520
Q ss_pred ---------------------------------C----------------------------------------------
Q 009592 343 ---------------------------------S---------------------------------------------- 343 (531)
Q Consensus 343 ---------------------------------~---------------------------------------------- 343 (531)
.
T Consensus 225 ~~eiW~~~~d~~~v~i~sP~Ge~~~~i~~~~~~~~~~~~~~~~t~i~v~y~~~~~~~g~~~i~i~~~~~~~GiW~i~~~~ 304 (455)
T cd07478 225 NLEIWGDFPDRFSVSIISPSGESSGRINPGIGGSESYKFVFEGTTVYVYYYLPEPYTGDQLIFIRFKNIKPGIWKIRLTG 304 (455)
T ss_pred EEEEecCCCCEEEEEEECCCCCccCccCcCCCcceeEEEEECCeEEEEEEcCCCCCCCCeEEEEEccCCCccceEEEEEe
Confidence 0
Q ss_pred ---------------------------------CCCCCCCceeeeeccccCCC-cccceEeCCc------cee--eeeee
Q 009592 344 ---------------------------------SLSNLAPWLITVGAGSLDRD-FVGPVVLGTG------MEI--IGKTV 381 (531)
Q Consensus 344 ---------------------------------~~~~~~~~vitVgA~~~~~~-~~~~~~~g~~------~~~--~G~~i 381 (531)
+.++.++++|+|||++.... ...||++|.. .++ ||..+
T Consensus 305 ~~~~~g~~~~Wlp~~~~~~~~t~f~~~~~~~tit~Pa~~~~vitVga~~~~~~~~~~~Ss~G~~~~~~~kpdi~APG~~i 384 (455)
T cd07478 305 VSITDGRFDAWLPSRGLLSENTRFLEPDPYTTLTIPGTARSVITVGAYNQNNNSIAIFSGRGPTRDGRIKPDIAAPGVNI 384 (455)
T ss_pred ccCCCceEEEEecCcCcCCCCCEeecCCCCceEecCCCCCCcEEEEEEeCCCCcccCccCCCcCCCCCcCceEEecCCCE
Confidence 01113468999999987654 7889999864 334 99999
Q ss_pred ccCCCCCCceeEEecccCCCCcCccccCCCCC
Q 009592 382 TPYNLKKMHPLVYAADVVVPGVHQNETNQCLP 413 (531)
Q Consensus 382 ~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~ 413 (531)
.++.+++.|..++|||||+|+|+|..|++++.
T Consensus 385 ~s~~~~~~~~~~sGTS~Aap~vaG~aALl~~~ 416 (455)
T cd07478 385 LTASPGGGYTTRSGTSVAAAIVAGACALLLQW 416 (455)
T ss_pred EEeecCCcEEeeCcHHHHHHHHHHHHHHHHHh
Confidence 99888899999999999999999999888764
No 31
>cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins. The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.4e-32 Score=277.33 Aligned_cols=241 Identities=28% Similarity=0.366 Sum_probs=173.4
Q ss_pred CCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCC-C-CCCCCCCCC
Q 009592 142 GQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPL-N-ATEDDRSPR 219 (531)
Q Consensus 142 G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 219 (531)
|+||+|||||||||++||+|.+.. ..+.++...++|........... . .........
T Consensus 1 G~gV~VaViDsGi~~~hp~l~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 (295)
T cd07474 1 GKGVKVAVIDTGIDYTHPDLGGPG---------------------FPNDKVKGGYDFVDDDYDPMDTRPYPSPLGDASAG 59 (295)
T ss_pred CCCCEEEEEECCcCCCCcccccCC---------------------CCCCceeeeeECccCCCCcccccccccccccCCCC
Confidence 899999999999999999997542 12344555555544211110000 0 000111245
Q ss_pred CCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcE
Q 009592 220 DMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHV 299 (531)
Q Consensus 220 d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~V 299 (531)
|..+|||||||+|+|. ......+.|+||+|+|+.+|+++..+ .+....+++||+|+++++++|
T Consensus 60 ~~~~HGT~vAgiiag~---------~~n~~~~~Giap~a~i~~~~~~~~~~--------~~~~~~~~~ai~~a~~~~~~I 122 (295)
T cd07474 60 DATGHGTHVAGIIAGN---------GVNVGTIKGVAPKADLYAYKVLGPGG--------SGTTDVIIAAIEQAVDDGMDV 122 (295)
T ss_pred CCCCcHHHHHHHHhcC---------CCccCceEeECCCCeEEEEEeecCCC--------CCCHHHHHHHHHHHHHcCCCE
Confidence 6889999999999988 32344568999999999999998554 678899999999999999999
Q ss_pred EEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCC--CCCCCceeeeeccccC-----CCcccceEeCC
Q 009592 300 LSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSL--SNLAPWLITVGAGSLD-----RDFVGPVVLGT 372 (531)
Q Consensus 300 In~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~--~~~~~~vitVgA~~~~-----~~~~~~~~~g~ 372 (531)
||||||... ......+..+++++.++|+++|+||||+|...... +...+++|+|||++.. .....+++.+.
T Consensus 123 in~S~g~~~--~~~~~~~~~~~~~~~~~gil~V~aAGN~g~~~~~~~~pa~~~~~i~Vga~~~~~~~~~~~~~~~~s~~~ 200 (295)
T cd07474 123 INLSLGSSV--NGPDDPDAIAINNAVKAGVVVVAAAGNSGPAPYTIGSPATAPSAITVGASTVADVAEADTVGPSSSRGP 200 (295)
T ss_pred EEeCCCCCC--CCCCCHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCCcCCCeEEEeeeeccCcCCCCceeccCCCCC
Confidence 999999832 22456777888999999999999999999765544 4568999999997632 22233333332
Q ss_pred c---------ceeeeeeeccCCCC--CCceeEEecccCCCCcCccccCCCCCC-CCCCCccc
Q 009592 373 G---------MEIIGKTVTPYNLK--KMHPLVYAADVVVPGVHQNETNQCLPG-SLTPEKVK 422 (531)
Q Consensus 373 ~---------~~~~G~~i~~~~~~--~~~~~~~gts~a~p~v~~~~a~~c~~~-~~~~~~~~ 422 (531)
. +..||..+.++... ..|....|||||+|+|+|..+.+.+.. .+++++++
T Consensus 201 ~~~~~~~kpdv~apG~~i~~~~~~~~~~~~~~~GTS~AaP~vaG~aAll~~~~p~l~~~~v~ 262 (295)
T cd07474 201 PTSDSAIKPDIVAPGVDIMSTAPGSGTGYARMSGTSMAAPHVAGAAALLKQAHPDWSPAQIK 262 (295)
T ss_pred CCCCCCcCCCEECCcCceEeeccCCCCceEEeccHHHHHHHHHHHHHHHHhhCCCCCHHHHH
Confidence 1 12288888877664 788999999999999999998876643 34444444
No 32
>cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases. Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.
Probab=99.98 E-value=1.2e-32 Score=278.03 Aligned_cols=236 Identities=17% Similarity=0.078 Sum_probs=165.4
Q ss_pred cchhhhcccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCC
Q 009592 131 MGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLN 210 (531)
Q Consensus 131 ~~~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~ 210 (531)
++..+|+.+++|+||+|+|||||||++||+|.++... ...++|....
T Consensus 27 ~~~~~w~~g~~G~gv~VaViDtGv~~~h~~l~~~~~~-------------------------~~~~~~~~~~-------- 73 (297)
T cd04059 27 NVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDP-------------------------EASYDFNDND-------- 73 (297)
T ss_pred ccHHHHhCCCCCcceEEEEEeCCcccCCHhHhhcccc-------------------------cccccccCCC--------
Confidence 5689999999999999999999999999999754311 0111222110
Q ss_pred CCCCCCCC--CCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHH
Q 009592 211 ATEDDRSP--RDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAA 288 (531)
Q Consensus 211 ~~~~~~~~--~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~a 288 (531)
....+ .|..+|||||||||+|.. +......||||+|+|+.+|+++.. ........+
T Consensus 74 ---~~~~~~~~~~~gHGT~vAgiiag~~---------~~~~~~~GvAp~a~l~~~~~~~~~----------~~~~~~~~~ 131 (297)
T cd04059 74 ---PDPTPRYDDDNSHGTRCAGEIAAVG---------NNGICGVGVAPGAKLGGIRMLDGD----------VTDVVEAES 131 (297)
T ss_pred ---CCCCCccccccccCcceeeEEEeec---------CCCcccccccccceEeEEEecCCc----------cccHHHHHH
Confidence 01122 277899999999999982 222234799999999999999754 223445566
Q ss_pred HHHHHHcCCcEEEEeccCCCCCC---CcccHHHHHHHHHHh-----CCcEEEEecCCCCCCCC--CC--CCCCCceeeee
Q 009592 289 IDDAIRDGVHVLSISIGTNQPFA---FNRDGIAIGALNAVK-----HNILVACSAGNSGPAPS--SL--SNLAPWLITVG 356 (531)
Q Consensus 289 i~~a~~~g~~VIn~S~G~~~~~~---~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~g~~~~--~~--~~~~~~vitVg 356 (531)
+.++.+ .++|||||||...... ........+++++.. +|+++|+||||+|.... .. ....+++|+||
T Consensus 132 ~~~~~~-~~~Vin~S~g~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~gilvV~AAGN~g~~~~~~~~~~~~~~~~vi~Vg 210 (297)
T cd04059 132 LGLNPD-YIDIYSNSWGPDDDGKTVDGPGPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVS 210 (297)
T ss_pred HhcccC-CceEEECCCCCCCCCCccCCCcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCCCCCCCCCcccCCCceEEEE
Confidence 665554 4599999999843221 122333444454443 69999999999997322 22 23568999999
Q ss_pred ccccCCCcccceEeCCccee--eeee-------eccCCCC---CCceeEEecccCCCCcCccccCCCCCC-CCCCCccc
Q 009592 357 AGSLDRDFVGPVVLGTGMEI--IGKT-------VTPYNLK---KMHPLVYAADVVVPGVHQNETNQCLPG-SLTPEKVK 422 (531)
Q Consensus 357 A~~~~~~~~~~~~~g~~~~~--~G~~-------i~~~~~~---~~~~~~~gts~a~p~v~~~~a~~c~~~-~~~~~~~~ 422 (531)
|++.++....|+++|....+ ||.. ++++.+. ..|..++|||||+|+|+|..+++-+.. .+++.+++
T Consensus 211 a~~~~g~~~~~s~~g~~~~~~a~g~~~~~~~~~i~~~~~~~~~~~~~~~sGTS~AaP~VAG~aAll~~~~p~lt~~~v~ 289 (297)
T cd04059 211 AVTANGVRASYSEVGSSVLASAPSGGSGNPEASIVTTDLGGNCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQ 289 (297)
T ss_pred eeCCCCCCcCCCCCCCcEEEEecCCCCCCCCCceEeCCCCCCCCcccccCCcchhhhhhHhHHHHhhccCCCCCHHHHH
Confidence 99999999999999987766 5544 5555544 557889999999999999998776533 34444443
No 33
>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.98 E-value=7.3e-33 Score=267.72 Aligned_cols=210 Identities=16% Similarity=0.121 Sum_probs=160.5
Q ss_pred ceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEeccc-ccccccCCCCCCCCCCCCCCCC
Q 009592 144 DVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLK-GFEQLYGPLNATEDDRSPRDMD 222 (531)
Q Consensus 144 gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~ 222 (531)
||+|||||||||++||+|.+.... .+.+.. .+ ..+.....|..
T Consensus 1 gV~VaViDsGi~~~h~~l~~~~~~---------------------------~~~~~~~~~---------~~~~~~~~d~~ 44 (222)
T cd07492 1 GVRVAVIDSGVDTDHPDLGNLALD---------------------------GEVTIDLEI---------IVVSAEGGDKD 44 (222)
T ss_pred CCEEEEEeCCCCCCChhhhccccc---------------------------ccccccccc---------ccCCCCCCCCC
Confidence 799999999999999999754311 000100 00 01123456788
Q ss_pred CCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEEEE
Q 009592 223 GHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSI 302 (531)
Q Consensus 223 gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn~ 302 (531)
||||||||||++. +|+++|+.+|+++..+ .+..+.+++||+|++++|++||||
T Consensus 45 gHGT~vAgiia~~-------------------~p~~~i~~~~v~~~~~--------~~~~~~~~~ai~~a~~~~v~Vin~ 97 (222)
T cd07492 45 GHGTACAGIIKKY-------------------APEAEIGSIKILGEDG--------RCNSFVLEKALRACVENDIRIVNL 97 (222)
T ss_pred CcHHHHHHHHHcc-------------------CCCCeEEEEEEeCCCC--------CcCHHHHHHHHHHHHHCCCCEEEe
Confidence 9999999999853 5999999999998775 678899999999999999999999
Q ss_pred eccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceeeeeccccCCCcccceEeCCccee--eeee
Q 009592 303 SIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEI--IGKT 380 (531)
Q Consensus 303 S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~g~~~~~--~G~~ 380 (531)
|||... ......+..+++++.++|+++|+||||++.... .++..++||+||+++.......+ +...++ ||..
T Consensus 98 S~G~~~--~~~~~~~~~~~~~a~~~g~l~V~aagN~~~~~~-~Pa~~~~vi~V~~~~~~~~~~~~---~~~~~~~apg~~ 171 (222)
T cd07492 98 SLGGPG--DRDFPLLKELLEYAYKAGGIIVAAAPNNNDIGT-PPASFPNVIGVKSDTADDPKSFW---YIYVEFSADGVD 171 (222)
T ss_pred CCCCCC--CCcCHHHHHHHHHHHHCCCEEEEECCCCCCCCC-CCccCCceEEEEecCCCCCcccc---cCCceEEeCCCC
Confidence 999842 223356677888999999999999999986543 36778999999998876554333 444444 8999
Q ss_pred eccCCCCCCceeEEecccCCCCcCccccCCCCCC-CCCCCccc
Q 009592 381 VTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPG-SLTPEKVK 422 (531)
Q Consensus 381 i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~-~~~~~~~~ 422 (531)
+.+..+.+.|..+.|||||+|+|+|..+.+.+.. .+++++++
T Consensus 172 i~~~~~~~~~~~~~GTS~Aap~vaG~~All~~~~p~l~~~~v~ 214 (222)
T cd07492 172 IIAPAPHGRYLTVSGNSFAAPHVTGMVALLLSEKPDIDANDLK 214 (222)
T ss_pred eEeecCCCCEEEeccHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 9887778889999999999999999998876543 34444444
No 34
>cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.97 E-value=6.9e-32 Score=271.55 Aligned_cols=216 Identities=19% Similarity=0.121 Sum_probs=154.5
Q ss_pred EEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCCCCCC
Q 009592 146 IVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHG 225 (531)
Q Consensus 146 ~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHG 225 (531)
+|||||||||.+||+|.+... ....+.. ......|..|||
T Consensus 2 ~VaviDtGi~~~hp~l~~~~~---------------------------~~~~~~~-------------~~~~~~d~~gHG 41 (291)
T cd04847 2 IVCVLDSGINRGHPLLAPALA---------------------------EDDLDSD-------------EPGWTADDLGHG 41 (291)
T ss_pred EEEEecCCCCCCChhhhhhhc---------------------------ccccccc-------------CCCCcCCCCCCh
Confidence 799999999999999975421 1111110 001156889999
Q ss_pred cccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcC---CcEEEE
Q 009592 226 THTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDG---VHVLSI 302 (531)
Q Consensus 226 ThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g---~~VIn~ 302 (531)
|||||||++.. .......|+||+++|+.+||++..+... .....+++++||+|+++.+ ++||||
T Consensus 42 T~vAgiia~~~---------~~~~~~~gvap~~~l~~~kv~~~~g~~~----~~~~~~~~~~ai~~a~~~~~~~~~ViN~ 108 (291)
T cd04847 42 TAVAGLALYGD---------LTLPGNGLPRPGCRLESVRVLPPNGEND----PELYGDITLRAIRRAVIQNPDIVRVFNL 108 (291)
T ss_pred HHHHHHHHcCc---------ccCCCCCCcccceEEEEEEEcCCCCCCC----ccChHHHHHHHHHHHHHhCCCceeEEEE
Confidence 99999999752 1123446999999999999999864100 0456788999999999863 499999
Q ss_pred eccCCCCCCCcc-cHHHHHHH-HHHhCCcEEEEecCCCCCCCCCC------------CCCCCceeeeeccccCCCcccce
Q 009592 303 SIGTNQPFAFNR-DGIAIGAL-NAVKHNILVACSAGNSGPAPSSL------------SNLAPWLITVGAGSLDRDFVGPV 368 (531)
Q Consensus 303 S~G~~~~~~~~~-~~~~~a~~-~a~~~Gi~vV~AAGN~g~~~~~~------------~~~~~~vitVgA~~~~~~~~~~~ 368 (531)
|||......... ..+..+++ .+.++|++||+||||+|...... ++.++++|+|||++.+.....++
T Consensus 109 SlG~~~~~~~~~~~~~~~~id~~a~~~gvlvV~aAGN~g~~~~~~~~~~~~~~~i~~Pa~~~~vItVgA~~~~~~~~~~s 188 (291)
T cd04847 109 SLGSPLPIDDGRPSSWAAALDQLAAEYDVLFVVSAGNLGDDDAADGPPRIQDDEIEDPADSVNALTVGAITSDDDITDRA 188 (291)
T ss_pred ecCCCCCccCCCCCcHHHHHHHHhccCCeEEEEECCCCCccccccccccccccccCCHHHhhhheeeeeeecCccCCCcc
Confidence 999953322221 24555554 46689999999999999875432 34578999999999988776666
Q ss_pred EeCCc--------------------cee--eeeeeccC------------------CCCCCceeEEecccCCCCcCcccc
Q 009592 369 VLGTG--------------------MEI--IGKTVTPY------------------NLKKMHPLVYAADVVVPGVHQNET 408 (531)
Q Consensus 369 ~~g~~--------------------~~~--~G~~i~~~------------------~~~~~~~~~~gts~a~p~v~~~~a 408 (531)
+++.. .++ ||..+.+. ..+..|....|||||+|+|++.++
T Consensus 189 ~~~~~~~~~~~~fs~~Gp~~~~~~KPDl~apG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~Vag~aA 268 (291)
T cd04847 189 RYSAVGPAPAGATTSSGPGSPGPIKPDVVAFGGNLAYDPSGNAADGDLSLLTTLSSPSGGGFVTVGGTSFAAPLAARLAA 268 (291)
T ss_pred cccccccccCCCccccCCCCCCCcCCcEEeeCCceeecCCCCCccCcceeeecccCCCCCcccccccchHHHHHHHHHHH
Confidence 55432 133 78777532 236778899999999999999998
Q ss_pred CCCCCC
Q 009592 409 NQCLPG 414 (531)
Q Consensus 409 ~~c~~~ 414 (531)
++.+..
T Consensus 269 ll~~~~ 274 (291)
T cd04847 269 GLFAEL 274 (291)
T ss_pred HHHHHC
Confidence 776643
No 35
>cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases. Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.
Probab=99.97 E-value=4.7e-31 Score=261.74 Aligned_cols=229 Identities=25% Similarity=0.227 Sum_probs=171.6
Q ss_pred CCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCC
Q 009592 141 YGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRD 220 (531)
Q Consensus 141 ~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d 220 (531)
+|+||+|+|||+||+.+||+|.+...... .+.... ........|
T Consensus 1 tG~gv~VaiiDsG~~~~h~~l~~~~~~~~---------------------------~~~~~~---------~~~~~~~~~ 44 (267)
T cd04848 1 TGAGVKVGVIDSGIDLSHPEFAGRVSEAS---------------------------YYVAVN---------DAGYASNGD 44 (267)
T ss_pred CCCceEEEEEeCCCCCCCccccCcccccc---------------------------cccccc---------cccCCCCCC
Confidence 69999999999999999999986532100 000000 000124456
Q ss_pred CCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEE
Q 009592 221 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVL 300 (531)
Q Consensus 221 ~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VI 300 (531)
..+|||||||+|+|.. +. ....|+||+|+|+.+|+++..+. ......+.++++++++.+++||
T Consensus 45 ~~~HGT~vagiiag~~---------~~-~~~~GiAp~a~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Vi 107 (267)
T cd04848 45 GDSHGTHVAGVIAAAR---------DG-GGMHGVAPDATLYSARASASAGS-------TFSDADIAAAYDFLAASGVRII 107 (267)
T ss_pred CCChHHHHHHHHhcCc---------CC-CCcccCCcCCEEEEEeccCCCCc-------ccchHHHHHHHHHHHhCCCeEE
Confidence 7899999999999883 22 44579999999999999987631 3567888999999999999999
Q ss_pred EEeccCCCCCC-----------CcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCC---------CCCCceeeeecccc
Q 009592 301 SISIGTNQPFA-----------FNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLS---------NLAPWLITVGAGSL 360 (531)
Q Consensus 301 n~S~G~~~~~~-----------~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~---------~~~~~vitVgA~~~ 360 (531)
|||||...... .....+...++.+.++|+++|+||||++....... ...+++|+|||++.
T Consensus 108 n~S~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~iv~aaGN~~~~~~~~~~~~~~~~~~~~~~~vi~Vga~~~ 187 (267)
T cd04848 108 NNSWGGNPAIDTVSTTYKGSAATQGNTLLAALARAANAGGLFVFAAGNDGQANPSLAAAALPYLEPELEGGWIAVVAVDP 187 (267)
T ss_pred EccCCCCCcccccccchhhhccccchHHHHHHHHHhhCCeEEEEeCCCCCCCCCccccccccccCccccCCEEEEEEecC
Confidence 99999953222 24556677788899999999999999987543332 24689999999999
Q ss_pred CCCcccc--eEeCCcc---ee--eeeeeccCCC--CCCceeEEecccCCCCcCccccCCCCCC-CCCCCccc
Q 009592 361 DRDFVGP--VVLGTGM---EI--IGKTVTPYNL--KKMHPLVYAADVVVPGVHQNETNQCLPG-SLTPEKVK 422 (531)
Q Consensus 361 ~~~~~~~--~~~g~~~---~~--~G~~i~~~~~--~~~~~~~~gts~a~p~v~~~~a~~c~~~-~~~~~~~~ 422 (531)
+.....+ ++++... .+ ||..+.+... +..|..+.|||+|+|+|+|..+.+.+.. .+.+++++
T Consensus 188 ~~~~~~~~~s~~~~~~~~~~~~apG~~i~~~~~~~~~~~~~~~GTS~Aap~vaG~~Al~~~~~p~l~~~~v~ 259 (267)
T cd04848 188 NGTIASYSYSNRCGVAANWCLAAPGENIYSTDPDGGNGYGRVSGTSFAAPHVSGAAALLAQKFPWLTADQVR 259 (267)
T ss_pred CCCcccccccccchhhhhheeecCcCceeecccCCCCcccccceeEchHHHHHHHHHHHHHHCCCCCHHHHH
Confidence 8887777 7776532 22 8888888776 6789999999999999999998877643 33444443
No 36
>KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=8.1e-28 Score=245.06 Aligned_cols=314 Identities=22% Similarity=0.275 Sum_probs=219.7
Q ss_pred CceEEEEecCCCCCCccchhhHHHHHHHHHHhhcchhhhccce------EEEeeeeeeeEEEEeCH-----HHHHHhhcC
Q 009592 23 KQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASH------LYSYKHSINGFSAVLTP-----DEAARLSEL 91 (531)
Q Consensus 23 ~~~yiV~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~g~s~~~~~-----~~~~~l~~~ 91 (531)
+.+|||.|+..- ..+.++.++++.+...+...-++ -..|..-|.-+-++-.. -++++|+.+
T Consensus 49 e~EyIv~F~~y~--------~Ak~r~syi~skl~gS~VtnWriipR~Npa~~YPsDF~vl~i~e~~k~~~~~~ierLe~h 120 (1033)
T KOG4266|consen 49 ESEYIVRFKQYK--------PAKDRRSYIESKLRGSGVTNWRIIPRINPATKYPSDFGVLWIEESGKEAVVGEIERLEMH 120 (1033)
T ss_pred cceeEEEecccc--------cchHHHHHHHHHhhcCCCCceeEeeccCccccCCCccceEEEeccCccchhheeeehhcC
Confidence 688999999754 22345566665544333222233 23344445555554432 357899999
Q ss_pred CCeEEEEeCCCccccccC------------CCCcccc-ccc---hhh----hcccc-----------ccccchhhhcccC
Q 009592 92 EEVVSVYPSHPEKYSLQT------------TRSWEFV-GLD---EVA----KQNWN-----------HFNMGQDLLSKAR 140 (531)
Q Consensus 92 p~V~~v~~~~p~~~~~~~------------~~~~~~~-~~~---~~~----~~~~~-----------~~~~~~~~~~~~~ 140 (531)
|.|+.|.|.+ .+.... +....++ |.. ..+ ..+|. .+.+++-+|..|+
T Consensus 121 p~vk~v~pqr--~V~r~l~y~~~~~~p~n~t~~~~~~qg~~~~r~a~~s~~~~n~~RHl~a~~rQv~s~l~Ad~LWk~Gy 198 (1033)
T KOG4266|consen 121 PDVKVVFPQR--RVLRGLSYPDGKKRPGNITTSMSFEQGTESSRMADTSNTTLNWSRHLLAQKRQVTSMLGADHLWKKGY 198 (1033)
T ss_pred CCceeecchh--hhhhcccccccCCCCCcceeeeeccccccccCCccccccccccchhhhhhhHHHHHHhchhhHHhccc
Confidence 9999999988 543210 0000011 000 000 00111 1117789999999
Q ss_pred CCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCC
Q 009592 141 YGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRD 220 (531)
Q Consensus 141 ~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d 220 (531)
+|++|+|||.|||+..+||.|+.-.. ..+| .+ ...-.|
T Consensus 199 TGa~VkvAiFDTGl~~~HPHFrnvKE---RTNW-------------------------TN--------------E~tLdD 236 (1033)
T KOG4266|consen 199 TGAKVKVAIFDTGLRADHPHFRNVKE---RTNW-------------------------TN--------------EDTLDD 236 (1033)
T ss_pred cCCceEEEEeecccccCCccccchhh---hcCC-------------------------cC--------------cccccc
Confidence 99999999999999999999973210 0112 11 124457
Q ss_pred CCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEE
Q 009592 221 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVL 300 (531)
Q Consensus 221 ~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VI 300 (531)
.-||||.|||+||+.. .-.|.||+++|+++|||.+.. -.+++..++|++||+...+||+
T Consensus 237 ~lgHGTFVAGvia~~~-------------ec~gfa~d~e~~~frvft~~q--------VSYTSWFLDAFNYAI~~kidvL 295 (1033)
T KOG4266|consen 237 NLGHGTFVAGVIAGRN-------------ECLGFASDTEIYAFRVFTDAQ--------VSYTSWFLDAFNYAIATKIDVL 295 (1033)
T ss_pred CcccceeEeeeeccch-------------hhcccCCccceeEEEeeccce--------eehhhHHHHHHHHHHhhhcceE
Confidence 8899999999999872 236999999999999999876 6889999999999999999999
Q ss_pred EEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCC--CceeeeeccccCCCcccceEeCCc-ceee
Q 009592 301 SISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLA--PWLITVGAGSLDRDFVGPVVLGTG-MEII 377 (531)
Q Consensus 301 n~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~--~~vitVgA~~~~~~~~~~~~~g~~-~~~~ 377 (531)
|+|+|++ ++.+.+.-.-+-...+.+|++|.|+||+|+-.++..+++ ..||.||-.+.++..+.||+.|-. .++|
T Consensus 296 NLSIGGP---DfmD~PFVeKVwEltAnNvIMvSAiGNDGPLYGTLNNPaDQsDViGVGGIdfdD~IA~FSSRGMtTWELP 372 (1033)
T KOG4266|consen 296 NLSIGGP---DFMDLPFVEKVWELTANNVIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDFDDHIASFSSRGMTTWELP 372 (1033)
T ss_pred eeccCCc---ccccchHHHHHHhhccCcEEEEEecCCCCcceeecCCcccccceeeeccccccchhhhhccCCcceeecC
Confidence 9999994 456666655555677899999999999999888877654 589999999999999999988742 2332
Q ss_pred -------------eeeeccCCCCCCceeEEecccCCCCcCccccCCCC
Q 009592 378 -------------GKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCL 412 (531)
Q Consensus 378 -------------G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~ 412 (531)
|..+......+...-.+|||.++|.|+|..+.+.+
T Consensus 373 ~GYGRmkpDiVtYG~~v~GS~v~~GCr~LSGTSVaSPVVAGav~LLvS 420 (1033)
T KOG4266|consen 373 HGYGRMKPDIVTYGRDVMGSKVSTGCRSLSGTSVASPVVAGAVCLLVS 420 (1033)
T ss_pred CcccccCCceEeeccccccCcccccchhccCCcccchhhhceeeeEee
Confidence 23332222345677889999999999998866544
No 37
>PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification. ; InterPro: IPR000209 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase families S8 (subfamilies S8A (subtilisin) and S8B (kexin)) and S53 (sedolisin) both of which are members of clan SB. The subtilisin family is the second largest serine protease family characterised to date. Over 200 subtilises are presently known, more than 170 of which with their complete amino acid sequence []. It is widespread, being found in eubacteria, archaebacteria, eukaryotes and viruses []. The vast majority of the family are endopeptidases, although there is an exopeptidase, tripeptidyl peptidase [, ]. Structures have been determined for several members of the subtilisin family: they exploit the same catalytic triad as the chymotrypsins, although the residues occur in a different order (HDS in chymotrypsin and DHS in subtilisin), but the structures show no other similarity [, ]. Some subtilisins are mosaic proteins, while others contain N- and C-terminal extensions that show no sequence similarity to any other known protein []. Based on sequence homology, a subdivision into six families has been proposed []. The proprotein-processing endopeptidases kexin, furin and related enzymes form a distinct subfamily known as the kexin subfamily (S8B). These preferentially cleave C-terminally to paired basic amino acids. Members of this subfamily can be identified by subtly different motifs around the active site [, ]. Members of the kexin family, along with endopeptidases R, T and K from the yeast Tritirachium and cuticle-degrading peptidase from Metarhizium, require thiol activation. This can be attributed to the presence of Cys-173 near to the active histidine [].Only 1 viral member of the subtilisin family is known, a 56kDa protease from herpes virus 1, which infects the channel catfish []. Sedolisins (serine-carboxyl peptidases) are proteolytic enzymes whose fold resembles that of subtilisin; however, they are considerably larger, with the mature catalytic domains containing approximately 375 amino acids. The defining features of these enzymes are a unique catalytic triad, Ser-Glu-Asp, as well as the presence of an aspartic acid residue in the oxyanion hole. High-resolution crystal structures have now been solved for sedolisin from Pseudomonas sp. 101, as well as for kumamolisin from a thermophilic bacterium, Bacillus sp. MN-32. Mutations in the human gene leads to a fatal neurodegenerative disease []. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 3EIF_A 1XF1_B 3F7M_A 3F7O_B 2QTW_B 2W2O_A 3GCX_A 3P5B_A 3M0C_B 2XTJ_A ....
Probab=99.95 E-value=2e-28 Score=245.16 Aligned_cols=218 Identities=27% Similarity=0.320 Sum_probs=163.0
Q ss_pred EEEEeecccCCCCCCCc-CCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCCCCCCCC
Q 009592 146 IVGLVDNGVWPESKSFS-DEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGH 224 (531)
Q Consensus 146 ~VaViDtGid~~Hp~f~-~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gH 224 (531)
+|||||||||++||+|. ++. ...++.+.+.|.+.. .......|..+|
T Consensus 1 ~V~viDtGid~~h~~~~~~~~----------------------~~~~~~~~~~~~~~~----------~~~~~~~~~~~H 48 (282)
T PF00082_consen 1 KVAVIDTGIDPNHPDFSSGNF----------------------IWSKVPGGYNFVDGN----------PNPSPSDDDNGH 48 (282)
T ss_dssp EEEEEESBBTTTSTTTTCTTE----------------------EEEEEEEEEETTTTB----------STTTSSSTSSSH
T ss_pred CEEEEcCCcCCCChhHccCCc----------------------ccccccceeeccCCC----------CCcCccccCCCc
Confidence 69999999999999997 321 112333445554431 112345678899
Q ss_pred CcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHH-HcCCcEEEEe
Q 009592 225 GTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI-RDGVHVLSIS 303 (531)
Q Consensus 225 GThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~-~~g~~VIn~S 303 (531)
||||||+|++.. . .......|+||+|+|+.+|+++.. ......++++|++++ +.+++|||||
T Consensus 49 GT~va~ii~~~~-~-------~~~~~~~Gva~~a~l~~~~i~~~~---------~~~~~~~~~ai~~~~~~~~~~Vin~S 111 (282)
T PF00082_consen 49 GTHVAGIIAGNG-G-------NNGPGINGVAPNAKLYSYKIFDNS---------GGTSSDLIEAIEYAVKNDGVDVINLS 111 (282)
T ss_dssp HHHHHHHHHHTT-S-------SSSSSETCSSTTSEEEEEECSSTT---------SEEHHHHHHHHHHHHHHTTSSEEEEC
T ss_pred cchhhhhccccc-c-------cccccccccccccccccccccccc---------ccccccccchhhhhhhccCCcccccc
Confidence 999999999983 1 122335799999999999998765 466788999999999 8999999999
Q ss_pred ccCC--CCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCC---CCCCCCceeeeeccccCCCcccceEeCCcc----
Q 009592 304 IGTN--QPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSS---LSNLAPWLITVGAGSLDRDFVGPVVLGTGM---- 374 (531)
Q Consensus 304 ~G~~--~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~---~~~~~~~vitVgA~~~~~~~~~~~~~g~~~---- 374 (531)
||.. .........+..+++.+.++|+++|+||||+|..... .+...+++|+||+++.......|+++|...
T Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~g~l~v~aaGN~~~~~~~~~~~Pa~~~~vi~Vg~~~~~~~~~~~s~~g~~~~~~~ 191 (282)
T PF00082_consen 112 FGSNSGPPDPSYSDILEEAIDYAEKKGILIVFAAGNNGPNDDRNISFPASSPNVITVGAVDNNGQPASYSNYGGPSDDGR 191 (282)
T ss_dssp EEBEESSSHSHHHHHHHHHHHHHHHTTEEEEEE--SSSSBTTBTGEBTTTSTTSEEEEEEETTSSBSTTSSBSTTETTCT
T ss_pred ccccccccccccccccccccccccccCcceeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9882 2222334456677788999999999999999876543 445569999999999888888899987654
Q ss_pred ---ee--eeeeeccCCCC---CCceeEEecccCCCCcCccccCCCC
Q 009592 375 ---EI--IGKTVTPYNLK---KMHPLVYAADVVVPGVHQNETNQCL 412 (531)
Q Consensus 375 ---~~--~G~~i~~~~~~---~~~~~~~gts~a~p~v~~~~a~~c~ 412 (531)
++ ||..+.+.... ..|....|||+|+|.+++..+.+++
T Consensus 192 ~~~di~a~G~~i~~~~~~~~~~~~~~~~GTS~Aap~vag~~All~~ 237 (282)
T PF00082_consen 192 IKPDIAAPGGNILSAVPGSDRGSYTSFSGTSFAAPVVAGAAALLLS 237 (282)
T ss_dssp TCEEEEEECSSEEEEETTTESEEEEEEESHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCcCCchHHHHHHHHHHHHH
Confidence 44 88877554443 3477889999999999998887766
No 38
>cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members hav
Probab=99.93 E-value=2e-25 Score=216.72 Aligned_cols=178 Identities=25% Similarity=0.280 Sum_probs=144.9
Q ss_pred CCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHH-Hc
Q 009592 217 SPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI-RD 295 (531)
Q Consensus 217 ~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~-~~ 295 (531)
...+..+|||||||+|++... .. ...|+||+++|+.+|+..... ......+++++++++ ..
T Consensus 39 ~~~~~~~HGt~va~~i~~~~~---------~~-~~~g~a~~a~i~~~~~~~~~~--------~~~~~~~~~ai~~~~~~~ 100 (241)
T cd00306 39 DPDDGNGHGTHVAGIIAASAN---------NG-GGVGVAPGAKLIPVKVLDGDG--------SGSSSDIAAAIDYAAADQ 100 (241)
T ss_pred CCCCCCCcHHHHHHHHhcCCC---------CC-CCEEeCCCCEEEEEEEecCCC--------CcCHHHHHHHHHHHHhcc
Confidence 345678999999999998731 11 127999999999999998764 577889999999999 89
Q ss_pred CCcEEEEeccCCCCCCCcccHHHHHHHHHHhC-CcEEEEecCCCCCCCC---CCCCCCCceeeeeccccCCCcc-cceEe
Q 009592 296 GVHVLSISIGTNQPFAFNRDGIAIGALNAVKH-NILVACSAGNSGPAPS---SLSNLAPWLITVGAGSLDRDFV-GPVVL 370 (531)
Q Consensus 296 g~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~-Gi~vV~AAGN~g~~~~---~~~~~~~~vitVgA~~~~~~~~-~~~~~ 370 (531)
+++|||||||..... ....+..++.++.++ |+++|+|+||++.... ..+...+++|+||+++...... .++..
T Consensus 101 ~~~iin~S~g~~~~~--~~~~~~~~~~~~~~~~~~i~V~aaGN~~~~~~~~~~~p~~~~~vi~Vga~~~~~~~~~~~~~~ 178 (241)
T cd00306 101 GADVINLSLGGPGSP--PSSALSEAIDYALAKLGVLVVAAAGNDGPDGGTNIGYPAASPNVIAVGAVDRDGTPASPSSNG 178 (241)
T ss_pred CCCEEEeCCCCCCCC--CCHHHHHHHHHHHHhcCeEEEEecCCCCCCCCCCccCCccCCceEEEEecCcCCCccCCcCCC
Confidence 999999999994322 345666777888888 9999999999998766 4667889999999999888776 77777
Q ss_pred CCccee--eeeeecc--CCCCCCceeEEecccCCCCcCccccCCCCCC
Q 009592 371 GTGMEI--IGKTVTP--YNLKKMHPLVYAADVVVPGVHQNETNQCLPG 414 (531)
Q Consensus 371 g~~~~~--~G~~i~~--~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~ 414 (531)
+...++ ||..+.. ......+....|||+|+|+++|..+++.+..
T Consensus 179 ~~~~~~~apg~~~~~~~~~~~~~~~~~~GTS~Aap~vaG~~Al~~~~~ 226 (241)
T cd00306 179 GAGVDIAAPGGDILSSPTTGGGGYATLSGTSMAAPIVAGVAALLLSAN 226 (241)
T ss_pred CCCceEEeCcCCccCcccCCCCCeEeeccHHHHHHHHHHHHHHHHHHC
Confidence 777666 7777765 3446788999999999999999998776643
No 39
>cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.92 E-value=4.8e-26 Score=222.11 Aligned_cols=167 Identities=20% Similarity=0.139 Sum_probs=124.5
Q ss_pred CCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHH--HHc
Q 009592 218 PRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDA--IRD 295 (531)
Q Consensus 218 ~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a--~~~ 295 (531)
..|.++|||||||||+|. .|++|+|+|+..++... ..+.+..+++|+ .+.
T Consensus 33 ~~~~~~HGThVAgiiag~----------------~~~~p~a~~~~~~~~~~------------~~~~~~~~i~~~~~~~~ 84 (247)
T cd07488 33 NNTFDDHATLVASIMGGR----------------DGGLPAVNLYSSAFGIK------------SNNGQWQECLEAQQNGN 84 (247)
T ss_pred CCCCCCHHHHHHHHHHhc----------------cCCCCccceehhhhCCC------------CCCccHHHHHHHHHhcC
Confidence 447899999999999987 35679999987555322 223456777888 667
Q ss_pred CCcEEEEeccCCCCCC-----CcccHHHHHHHHHHhC-CcEEEEecCCCCCCCC-----CCCCCCCceeeeeccccCCCc
Q 009592 296 GVHVLSISIGTNQPFA-----FNRDGIAIGALNAVKH-NILVACSAGNSGPAPS-----SLSNLAPWLITVGAGSLDRDF 364 (531)
Q Consensus 296 g~~VIn~S~G~~~~~~-----~~~~~~~~a~~~a~~~-Gi~vV~AAGN~g~~~~-----~~~~~~~~vitVgA~~~~~~~ 364 (531)
+++|||||||...... .....+..+++++.++ |+++|+||||+|.+.. ..+..++++|+|||++..+..
T Consensus 85 gv~VINmS~G~~~~~~~~~~~~~~~~l~~aid~~a~~~GvlvV~AAGN~g~~~~~~~~i~~pa~~~nvItVGA~d~~g~~ 164 (247)
T cd07488 85 NVKIINHSYGEGLKRDPRAVLYGYALLSLYLDWLSRNYEVINVFSAGNQGKEKEKFGGISIPTLAYNSIVVGSTDRNGDR 164 (247)
T ss_pred CceEEEeCCccCCCCCccccccccchHHHHHHHHHhhCCEEEEEecCCCCCCccCCCCcCCccccCCeEEEEEecCCCCc
Confidence 9999999999853332 1234566777777666 9999999999998542 234467899999999988765
Q ss_pred ccc---eEeC--------Cccee--eeeeeccCCCCCCceeEEecccCCCCcCccccCCCCCC
Q 009592 365 VGP---VVLG--------TGMEI--IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPG 414 (531)
Q Consensus 365 ~~~---~~~g--------~~~~~--~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~ 414 (531)
..+ ++++ ...++ ||+.+.+ +++.|..++|||||+|||+|..+++.+..
T Consensus 165 ~~~s~~sn~~~~~~~~~~~~~di~APG~~i~s--~~~~~~~~sGTSmAaP~VaG~aAlll~~~ 225 (247)
T cd07488 165 FFASDVSNAGSEINSYGRRKVLIVAPGSNYNL--PDGKDDFVSGTSFSAPLVTGIIALLLEFY 225 (247)
T ss_pred ceecccccccCCCCCCCCceeEEEEeeeeEEC--CCCceeeecccchHHHHHHHHHHHHHHHC
Confidence 433 4332 22344 9999987 56789999999999999999998887643
No 40
>KOG3526 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=2.4e-20 Score=181.33 Aligned_cols=361 Identities=14% Similarity=0.104 Sum_probs=212.0
Q ss_pred HHHHHHHHHHHhhhhhcc---CCceEEEEecCCCCCCccchhhHHHHHHHHHHhh--cchhhhccceEEEeeeeeeeEEE
Q 009592 4 IFIFFLFLLTLLASSAQK---QKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVK--DNEEEARASHLYSYKHSINGFSA 78 (531)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~---~~~~yiV~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~g~s~ 78 (531)
++..++++||....+... -+..|+|+|++.... + ..+++.++.- .........-+|.|. -+++.-
T Consensus 9 l~a~fl~lf~~~~gag~~~~vftnhflv~l~~g~g~----~----~ah~va~~hgf~nrg~~~a~d~eyhf~--h~~l~h 78 (629)
T KOG3526|consen 9 LIAVFLSLFCVMIGAGEAVDVFTNHFLVHLKEGGGL----E----DAHRVAKRHGFINRGQVAASDNEYHFV--HPALVH 78 (629)
T ss_pred HHHHHHHHHHHHhccccCcceeeeeEEEEEeccCCh----H----HHHHHHHHhCccccccccccCceeeee--ccccch
Confidence 455566666665554433 378999999987632 1 1112221111 111111122344443 333322
Q ss_pred Ee---CHHHHHHhhcCCCeEEEEeCCCccccccC------------CCC---ccccccchhhhcc--ccccccchhhhcc
Q 009592 79 VL---TPDEAARLSELEEVVSVYPSHPEKYSLQT------------TRS---WEFVGLDEVAKQN--WNHFNMGQDLLSK 138 (531)
Q Consensus 79 ~~---~~~~~~~l~~~p~V~~v~~~~p~~~~~~~------------~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~ 138 (531)
-- +...-++|.++|+|+-+.+.. -+.... ... ...|-+....|.. .-+..++.++|..
T Consensus 79 ar~rrsl~h~~~l~~dp~v~~a~qq~--gf~r~krgyrp~~~fd~~~~dplf~~qwylkntgqaggk~rldlnv~~awa~ 156 (629)
T KOG3526|consen 79 ARTRRSLGHHAKLHNDPEVKMALQQE--GFDRKKRGYRPINEFDINMNDPLFTKQWYLKNTGQAGGKPRLDLNVAEAWAL 156 (629)
T ss_pred hhhhcccchhhhhccChhHhhhhhcc--ccchhhccCCchhhhccccCCcccceeeeeecccccCCcccccccHHHHHhh
Confidence 22 223447888899998776544 332110 000 1112222111111 1123377899999
Q ss_pred cCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCCCCCCCCCC
Q 009592 139 ARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSP 218 (531)
Q Consensus 139 ~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (531)
+++|++|++||+|.||||-||||+.+ |+ --..++|+.+.... +...
T Consensus 157 g~tgknvttaimddgvdymhpdlk~n------------------yn-------aeasydfssndpfp---------ypry 202 (629)
T KOG3526|consen 157 GYTGKNVTTAIMDDGVDYMHPDLKSN------------------YN-------AEASYDFSSNDPFP---------YPRY 202 (629)
T ss_pred cccCCCceEEeecCCchhcCcchhcc------------------cC-------ceeecccccCCCCC---------CCcc
Confidence 99999999999999999999999632 11 11234454431111 1111
Q ss_pred CC--CCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHH-c
Q 009592 219 RD--MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR-D 295 (531)
Q Consensus 219 ~d--~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~-~ 295 (531)
.| .+.|||.|||-+++...++ -.-.|||.+.++..+|+++ ..+..++++|-....+ .
T Consensus 203 tddwfnshgtrcagev~aardng---------icgvgvaydskvagirmld-----------qpymtdlieansmghep~ 262 (629)
T KOG3526|consen 203 TDDWFNSHGTRCAGEVVAARDNG---------ICGVGVAYDSKVAGIRMLD-----------QPYMTDLIEANSMGHEPS 262 (629)
T ss_pred cchhhhccCccccceeeeeccCC---------ceeeeeeeccccceeeecC-----------CchhhhhhhhcccCCCCc
Confidence 22 6899999999998875332 1125999999999999997 4566677766443332 3
Q ss_pred CCcEEEEeccCCCCCCCcccHHH---HHHHHHHh-----CCcEEEEecCCCCCCC---CCCCCCCCceeeeeccccCCCc
Q 009592 296 GVHVLSISIGTNQPFAFNRDGIA---IGALNAVK-----HNILVACSAGNSGPAP---SSLSNLAPWLITVGAGSLDRDF 364 (531)
Q Consensus 296 g~~VIn~S~G~~~~~~~~~~~~~---~a~~~a~~-----~Gi~vV~AAGN~g~~~---~~~~~~~~~vitVgA~~~~~~~ 364 (531)
.++|.+.|||........+-+-+ +|+-+-++ .|-+.|.|+|..|.+. |.-.+.+-|.|++-+.-++++-
T Consensus 263 kihiysaswgptddgktvdgprnatmraiv~gvnegrnglgsiyvwasgdgge~ddcncdgyaasmwtisinsaindg~n 342 (629)
T KOG3526|consen 263 KIHIYSASWGPTDDGKTVDGPRNATMRAIVRGVNEGRNGLGSIYVWASGDGGEDDDCNCDGYAASMWTISINSAINDGEN 342 (629)
T ss_pred eEEEEecccCcCCCCcccCCchhHHHHHHHHhhhcccCCcccEEEEecCCCCCccccCCccchhheEEEEeehhhcCCcc
Confidence 67999999998655444443332 33333333 4679999999988642 2222355688888776555433
Q ss_pred cc---------ceEeCCcceeeeeeeccCCCCC-CceeEEecccCCCCcCccccCCCCC-CCCCCCcccceEEEEee
Q 009592 365 VG---------PVVLGTGMEIIGKTVTPYNLKK-MHPLVYAADVVVPGVHQNETNQCLP-GSLTPEKVKGKIVLCMR 430 (531)
Q Consensus 365 ~~---------~~~~g~~~~~~G~~i~~~~~~~-~~~~~~gts~a~p~v~~~~a~~c~~-~~~~~~~~~gkIvLi~r 430 (531)
+- .|++.++..-|-..+..+.+.+ -....+|||.|+|..+|+-+.+.+. ..+.-.|+.---||...
T Consensus 343 ahydescsstlastfsng~rnpetgvattdlyg~ct~~hsgtsaaapeaagvfalaleanp~ltwrd~qhltvltsk 419 (629)
T KOG3526|consen 343 AHYDESCSSTLASTFSNGGRNPETGVATTDLYGRCTRSHSGTSAAAPEAAGVFALALEANPSLTWRDLQHLTVLTSK 419 (629)
T ss_pred ccccchhhHHHHHHhhcCCcCCCcceeeeccccceecccCCccccCccccceeeeeeccCCCcchhhhhheeeeecc
Confidence 21 2234444444555666655533 3456789999999999988877663 45677788877777764
No 41
>COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=2.1e-20 Score=201.06 Aligned_cols=227 Identities=21% Similarity=0.249 Sum_probs=172.8
Q ss_pred hhhhcc--cCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCC
Q 009592 133 QDLLSK--ARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLN 210 (531)
Q Consensus 133 ~~~~~~--~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~ 210 (531)
...|.. +.+|+|++|+|||+||+..||+|.+.... .++|...
T Consensus 130 ~~~~~~~~~~~g~gv~~~vid~gv~~~~~~~~~~~~~---------------------------~~~~~~~--------- 173 (508)
T COG1404 130 GALVANGAGLTGKGVTVAVIDTGVDASHPDLAGSAVA---------------------------GGDFVDG--------- 173 (508)
T ss_pred ccccccccCCCCCCeEEEEeccCCCCCChhhhccccc---------------------------ccccccC---------
Confidence 567777 99999999999999999999999765310 0122211
Q ss_pred CCCCCC-CCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHH
Q 009592 211 ATEDDR-SPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAI 289 (531)
Q Consensus 211 ~~~~~~-~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai 289 (531)
... ...|..+|||||+|++++... .+.....|++|+++++.+|+++... + ....++++++|
T Consensus 174 ---~~~~~~~d~~~hGt~vag~ia~~~~--------~~~~~~~g~a~~~~~~~~~~~~~~~-g------~~~~~~~~~~i 235 (508)
T COG1404 174 ---DPEPPFLDDNGHGTHVAGTIAAVIF--------DNGAGVAGVAPGAKLLLVKVLGSGG-G------SGELSDVAEGI 235 (508)
T ss_pred ---CCCCCCCCCCCCcceeeeeeeeecc--------cCCCccccccCCCcEEEEEeccCCC-C------cccHHHHHHHH
Confidence 111 246889999999999998410 1122357999999999999998762 1 78888889999
Q ss_pred HHHHHcC--CcEEEEeccCCCCCCCcccHHHHHHHHHHhCC-cEEEEecCCCCCCCC----CCCCCC--Cceeeeecccc
Q 009592 290 DDAIRDG--VHVLSISIGTNQPFAFNRDGIAIGALNAVKHN-ILVACSAGNSGPAPS----SLSNLA--PWLITVGAGSL 360 (531)
Q Consensus 290 ~~a~~~g--~~VIn~S~G~~~~~~~~~~~~~~a~~~a~~~G-i~vV~AAGN~g~~~~----~~~~~~--~~vitVgA~~~ 360 (531)
+++++.+ +++||||+|.. ........+..++.+++..| +++|+|+||.|.+.. .++... +.+++|||++.
T Consensus 236 ~~~~~~~~~~~~in~s~g~~-~~~~~~~~~~~a~~~~~~~g~v~~v~aagn~~~~~~~~~~~~p~~~~~~~~i~v~a~~~ 314 (508)
T COG1404 236 EGAANLGGPADVINLSLGGS-LSDSASPALGDALAAAANAGGVVIVAAAGNDGSNASGGDLAYPASYPAPNVIAVGALDL 314 (508)
T ss_pred HHHHhcCCCCcEEEecCCCC-ccccccHHHHHHHHHHHHcCCEEEEEecccCCCCCccccccCCcccCCCceEEEecCCC
Confidence 9999999 99999999984 22344456667778888887 999999999997752 233333 49999999998
Q ss_pred CCCcccceEeCCc--cee--eeeeecc-----CCCCCC--ceeEEecccCCCCcCccccCCCCCC
Q 009592 361 DRDFVGPVVLGTG--MEI--IGKTVTP-----YNLKKM--HPLVYAADVVVPGVHQNETNQCLPG 414 (531)
Q Consensus 361 ~~~~~~~~~~g~~--~~~--~G~~i~~-----~~~~~~--~~~~~gts~a~p~v~~~~a~~c~~~ 414 (531)
.+....++++|.. .++ ||..+.. ..++.. |....||+|++|++++..+..-...
T Consensus 315 ~~~~~~~s~~g~~~~~~~~apg~~i~~~~~~~~~~~~~~~~~~~~Gts~a~p~v~g~aal~~~~~ 379 (508)
T COG1404 315 SDTVASFSNDGSPTGVDIAAPGVNILSLSAVNTLPGDGADYVTLSGTSMAAPHVSGVAALVLSAN 379 (508)
T ss_pred CCccccccccCCCCCcceeCCCccccccccceeeeCCccceEeeccccccccHHHHHHHHHHccC
Confidence 8889999999974 444 8888765 444555 8999999999999998887554433
No 42
>KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=2.4e-20 Score=198.61 Aligned_cols=177 Identities=19% Similarity=0.175 Sum_probs=131.1
Q ss_pred CCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEE
Q 009592 221 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVL 300 (531)
Q Consensus 221 ~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VI 300 (531)
...||||||||++|+.... ....||||+|+|+++++.+.--+. ..+...+.+|+..++++.+|||
T Consensus 309 Sg~HGTHVAgIa~anhpe~---------p~~NGvAPgaqIvSl~IGD~RLgs------METgtaltRA~~~v~e~~vDiI 373 (1304)
T KOG1114|consen 309 SGPHGTHVAGIAAANHPET---------PELNGVAPGAQIVSLKIGDGRLGS------METGTALTRAMIEVIEHNVDII 373 (1304)
T ss_pred CCCCcceehhhhccCCCCC---------ccccCCCCCCEEEEEEecCccccc------cccchHHHHHHHHHHHhcCCEE
Confidence 3569999999999985432 234699999999999998754321 4556679999999999999999
Q ss_pred EEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC---CCCceeeeeccccCC--------------C
Q 009592 301 SISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSN---LAPWLITVGAGSLDR--------------D 363 (531)
Q Consensus 301 n~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~---~~~~vitVgA~~~~~--------------~ 363 (531)
|||+|-....+.....++.+-+.+.++|++.|.||||+|+.-+++++ ...+||.|||--... .
T Consensus 374 NmSyGE~a~~pn~GRviEl~~e~vnKr~vI~VsSAGN~GPaltTVGaPggtTssvIgVGAYVsp~mm~a~y~~~e~vp~~ 453 (1304)
T KOG1114|consen 374 NMSYGEDAHLPNSGRVIELLRELVNKRGVIYVSSAGNNGPALTTVGAPGGTTSSVIGVGAYVSPGMMQAEYSVREPVPSN 453 (1304)
T ss_pred EeccCccCCCCCcchHHHHHHHHhhhccEEEEEeCCCCCCceeeccCCCCcccceEeeeeecCHHHHHhhhhhhccCCCC
Confidence 99999865555555666666677789999999999999999888875 356999999963322 1
Q ss_pred cccceEeCCcc------ee--eeeeeccCCC--CCCceeEEecccCCCCcCccccCCCC
Q 009592 364 FVGPVVLGTGM------EI--IGKTVTPYNL--KKMHPLVYAADVVVPGVHQNETNQCL 412 (531)
Q Consensus 364 ~~~~~~~g~~~------~~--~G~~i~~~~~--~~~~~~~~gts~a~p~v~~~~a~~c~ 412 (531)
....++.|+.. .+ ||-.|.+-.. -....++.||||++|++.|..+.+.+
T Consensus 454 ~YtWsSRgP~~DG~lGVsi~APggAiAsVP~~tlq~~qLMNGTSMsSP~acG~IAllLS 512 (1304)
T KOG1114|consen 454 PYTWSSRGPCLDGDLGVSISAPGGAIASVPQYTLQNSQLMNGTSMSSPSACGAIALLLS 512 (1304)
T ss_pred ccccccCCCCcCCCcceEEecCCccccCCchhhhhhhhhhCCcccCCccccchHHHHHH
Confidence 23345556543 23 5555543222 34567999999999999887765543
No 43
>cd02133 PA_C5a_like PA_C5a_like: Protease-associated domain containing proteins like Streptococcus pyogenes C5a peptidase. This group contains various PA domain-containing proteins similar to S. pyogenes C5a, including, i) Vpr, a minor extracellular serine protease from Bacillus subtilis, ii) a large molecular mass collagenolytic protease from Geobacillus collagenovorans MO-1, and iii) PrtS, a cell envelope protease from Streptococcus thermophilus CNRZ 385. Proteins in this group belong to the peptidase S8 family. C5a peptidase is a cell surface serine protease which specifically inactivates C5a [a chemotactic peptide, which attracts polymorphonuclear leukocytes (PMNs)], by cleaving it to release a 7-residue carboxy-terminal fragment which contains the PMN binding site. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promotin
Probab=99.70 E-value=9.1e-17 Score=144.05 Aligned_cols=105 Identities=27% Similarity=0.349 Sum_probs=83.2
Q ss_pred CCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCCcccc-CCCcccEEEEcHHHHHHHHHHHHcC
Q 009592 411 CLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSY-DAHYLPATAVLYDDAIKIHEYIKST 489 (531)
Q Consensus 411 c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~~~~~-~~~~iP~~~Is~~dG~~L~~~i~~~ 489 (531)
|...++...+++|||+||+||.|+|.+|+.+|+++||+++||||+......... ....||+++|++++|+.|++++++
T Consensus 36 g~~~d~~~~dv~GkIvL~~rg~c~~~~K~~~a~~aGA~gvIi~n~~~~~~~~~~~~~~~iP~v~Is~~dG~~L~~~l~~- 114 (143)
T cd02133 36 GTPEDFEGKDVKGKIALIQRGEITFVEKIANAKAAGAVGVIIYNNVDGLIPGTLGEAVFIPVVFISKEDGEALKAALES- 114 (143)
T ss_pred CchhccCCCCccceEEEEECCCCCHHHHHHHHHHCCCeEEEEeecCCCcccccCCCCCeEeEEEecHHHHHHHHHHHhC-
Confidence 555566677899999999999999999999999999999999999764322211 235789999999999999999988
Q ss_pred CCceEEEEeCeEEecCCCCCccccccCCCCC
Q 009592 490 NNPTAIIKQARTVLHTQPAPFMANFTSRGPN 520 (531)
Q Consensus 490 ~~~~~~i~~~~~~~~~~~~~~~s~FSS~GP~ 520 (531)
.+++.|+.. .. ....+.++.||||||.
T Consensus 115 -~~~i~~~~~--~~-~~~~p~va~fSsrgp~ 141 (143)
T cd02133 115 -SKKLTFNTK--KE-KATNPDLADFSSRGPW 141 (143)
T ss_pred -CCeEEEEec--cc-cccCCccccccCcCCC
Confidence 455555543 32 4456779999999996
No 44
>cd02129 PA_hSPPL_like PA_hSPPL_like: Protease-associated domain containing human signal peptide peptidase-like (hSPPL)-like. This group contains various PA domain-containing proteins similar to hSPPL2a and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is sorted to the late endosomes, SPPL2b to the plasma membrane. In activated dendritic cells, hSPPL2a and 2b catalyze the intramembrane proteolysis of tumor necrosis factor alpha triggering IL-12 production. hSPPL2a and 2b may have a broad substrate spectrum. The significance of the PA domain to these SPPLs has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate.
Probab=99.61 E-value=1.6e-15 Score=129.52 Aligned_cols=93 Identities=22% Similarity=0.346 Sum_probs=75.6
Q ss_pred CCceeEEecccCCCCcCccccCCCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCCc---c-c
Q 009592 388 KMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE---Y-S 463 (531)
Q Consensus 388 ~~~~~~~gts~a~p~v~~~~a~~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~~---~-~ 463 (531)
..++++..+. ...|.+.++.+.+++|||+|++||+|+|.+|+.+|+++||++|||||+...... . .
T Consensus 20 ~~~~~~~~~~----------~~gC~~~~~~~~~l~gkIaLV~RG~CsF~~K~~~Aq~aGA~aVII~nn~~~~~~~~~~~~ 89 (120)
T cd02129 20 TLLPLRNLTS----------SVLCSASDVPPGGLKGKAVVVMRGNCTFYEKARLAQSLGAEGLLIVSRERLVPPSGNRSE 89 (120)
T ss_pred cceeeecCCC----------cCCCCccccCccccCCeEEEEECCCcCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
Confidence 4566665543 357999888778999999999999999999999999999999999999763111 1 1
Q ss_pred cCCCcccEEEEcHHHHHHHHHHHHcCC
Q 009592 464 YDAHYLPATAVLYDDAIKIHEYIKSTN 490 (531)
Q Consensus 464 ~~~~~iP~~~Is~~dG~~L~~~i~~~~ 490 (531)
....+||+++|++++|+.|++.+.++-
T Consensus 90 ~~~v~IP~v~Is~~dG~~i~~~l~~~~ 116 (120)
T cd02129 90 YEKIDIPVALLSYKDMLDIQQTFGDSV 116 (120)
T ss_pred CcCCcccEEEEeHHHHHHHHHHhccCc
Confidence 245689999999999999999988653
No 45
>cd02122 PA_GRAIL_like PA _GRAIL_like: Protease-associated (PA) domain GRAIL-like. This group includes PA domain containing E3 (ubiquitin ligases) similar to human GRAIL (gene related to anergy in lymphocytes) protein. Proteins in this group contain a C3H2C3 RING finger. E3 ubiquitin ligase is part of an enzymic cascade, the end result of which is the ubiquitination of proteins. In this cascade, E1 activates the ubiquitin, the activated ubiquitin is carried by E2, and E3 recognizes the acceptor protein as well as catalyzes the transfer of the activated ubiquitin from E2 to this acceptor. GRAIL, a transmembrane protein localized in the endosomes, controls the development of T cell clonal anergy, and may ubiquitinate membrane-associated targets for T cell activation. GRAIL1 is associated with, and regulated by, two isoforms of otubain 1 (the ubiquitin-specific protease). Additional E3s belonging to this group include human (h)Goliath and Xenopus GREUL1 (Goliath Related E3 Ubiquitin Ligase
Probab=99.58 E-value=7.8e-15 Score=129.68 Aligned_cols=89 Identities=20% Similarity=0.213 Sum_probs=74.8
Q ss_pred cCCCCCCCC--CCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCC-cc--c-cCCCcccEEEEcHHHHHH
Q 009592 408 TNQCLPGSL--TPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGN-EY--S-YDAHYLPATAVLYDDAIK 481 (531)
Q Consensus 408 a~~c~~~~~--~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~-~~--~-~~~~~iP~~~Is~~dG~~ 481 (531)
...|.+.+. .+.+++|+|+||+||+|+|.+|+.+|+++||++|||||+.+... .+ . .....||+++|++++|+.
T Consensus 44 ~~gC~~~~~~~~~~~~~g~IaLV~RG~C~F~~K~~nA~~aGA~aVIIyn~~~~~~~~~~m~~~~~~~ip~v~Is~~~G~~ 123 (138)
T cd02122 44 HYGCDPDTRFPIPPNGEPWIALIQRGNCTFEEKIKLAAERNASAVVIYNNPGTGNETVKMSHPGTGDIVAIMITNPKGME 123 (138)
T ss_pred cCCCCCCccccCCccCCCeEEEEECCCCCHHHHHHHHHHCCCcEEEEEECCCCCCceeeccCCCCCcceEEEEcHHHHHH
Confidence 357998776 56789999999999999999999999999999999999976221 11 1 223578999999999999
Q ss_pred HHHHHHcCCCceEEE
Q 009592 482 IHEYIKSTNNPTAII 496 (531)
Q Consensus 482 L~~~i~~~~~~~~~i 496 (531)
|+++++++.+++++|
T Consensus 124 l~~~l~~G~~Vtv~~ 138 (138)
T cd02122 124 ILELLERGISVTMVI 138 (138)
T ss_pred HHHHHHcCCcEEEeC
Confidence 999999998887764
No 46
>cd02127 PA_hPAP21_like PA_hPAP21_like: Protease-associated domain containing proteins like the human secreted glycoprotein hPAP21 (human protease-associated domain-containing protein, 21kDa). This group contains various PA domain-containing proteins similar to hPAP21. Complex N-glycosylation may be required for the secretion of hPAP21. The significance of the PA domain to hPAP21 has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate.
Probab=99.58 E-value=8.3e-15 Score=126.06 Aligned_cols=89 Identities=21% Similarity=0.321 Sum_probs=73.7
Q ss_pred cCCCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCC-Cc---ccc----CCCcccEEEEcHHHH
Q 009592 408 TNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANG-NE---YSY----DAHYLPATAVLYDDA 479 (531)
Q Consensus 408 a~~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~-~~---~~~----~~~~iP~~~Is~~dG 479 (531)
...|.+.. ...+++|||+|++||+|+|.+|+.+|+++||++|||||+.... .. +.. ....||+++|++++|
T Consensus 21 ~~gC~~~~-~~~~~~g~I~Lv~RG~C~F~~K~~~Aq~aGA~avII~n~~~~~~~~~~~m~~~~~~~~i~IP~v~Is~~dG 99 (118)
T cd02127 21 LEACEELR-NIHDINGNIALIERGGCSFLTKAINAQKAGALAVIITDVNNDSDEYYVEMIQDDSSRRADIPAAFLLGKNG 99 (118)
T ss_pred cccCCCCC-CccccCCeEEEEECCCCCHHHHHHHHHHCCCcEEEEEECCCCccccceEecCCCCCCCceEEEEEecHHHH
Confidence 35798754 4668999999999999999999999999999999999986531 11 111 235899999999999
Q ss_pred HHHHHHHHcCCCceEEEE
Q 009592 480 IKIHEYIKSTNNPTAIIK 497 (531)
Q Consensus 480 ~~L~~~i~~~~~~~~~i~ 497 (531)
+.|++.++++..+++.|.
T Consensus 100 ~~L~~~l~~g~~~~~~~~ 117 (118)
T cd02127 100 YMIRKTLERLGLPYAIIN 117 (118)
T ss_pred HHHHHHHHcCCceEEeee
Confidence 999999999988877763
No 47
>cd02120 PA_subtilisin_like PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases. This group contains various PA domain-containing subtilisin-like proteases including melon cucumisin, Arabidopsis thaliana Ara12, a nodule specific serine protease from Alnus glutinosa ag12, members of the tomato P69 family, and tomato LeSBT2. These proteins belong to the peptidase S8 family. Cucumisin from the juice of melon fruits is a thermostable serine peptidase, with a broad substrate specificity for oligopeptides and proteins. A. thaliana Ara12 is a thermostable, extracellular serine protease, found chiefly in silique tissue and stem tissue. Ara12 is stimulated by Ca2+ ions. A. glutinosa ag12 is expressed at high levels in the nodules, and at low levels in the shoot tips; it is implicated in both symbiotic and non-symbiotic processes in plant development. The tomato P69 protease family is comprised of various protein isoforms of approximately 69KDa. These isoforms accu
Probab=99.57 E-value=3e-14 Score=124.98 Aligned_cols=123 Identities=51% Similarity=0.825 Sum_probs=97.0
Q ss_pred eEeCCcceeeeeeeccCCCCCCceeEEecccCCCCcCccccCCCCCCCCCCCcccceEEEEeeCCC-ccchhhhHHHhcC
Q 009592 368 VVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSG-FKLSKGMEVKRAG 446 (531)
Q Consensus 368 ~~~g~~~~~~G~~i~~~~~~~~~~~~~gts~a~p~v~~~~a~~c~~~~~~~~~~~gkIvLi~rG~c-~~~~K~~na~~aG 446 (531)
..+|++..+.|.+++.... ..++++++...+ .......|+...++..+++||||||+|+.| .+.+|+.+++++|
T Consensus 2 i~LGng~~i~G~sl~~~~~-~~~~~~~~~~~~----~~~~~~~C~~~~~~~~~v~GkIVlc~~~~~~~~~~k~~~~~~~G 76 (126)
T cd02120 2 VTLGNGKTIVGQSLYPGNL-KTYPLVYKSANS----GDVDASLCLPGSLDPSKVKGKIVLCDRGGNTSRVAKGDAVKAAG 76 (126)
T ss_pred EEeCCCCEEEEEEccCCCC-CccceEeccCcC----CCCccccCCCCCCChhhccccEEEEeCCCCccHHHHHHHHHHcC
Confidence 4678898899999986543 467777633321 223346799888878899999999999999 9999999999999
Q ss_pred ceEEEEecCCCCCCccccCCCcccEEEEcHHHHHHHHHHHHcCCCceEE
Q 009592 447 GVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAI 495 (531)
Q Consensus 447 A~gVIiynn~~~~~~~~~~~~~iP~~~Is~~dG~~L~~~i~~~~~~~~~ 495 (531)
|+|+|++++.............+|+++|++++|+.|++|++++...+++
T Consensus 77 A~gvI~~~~~~~~~~~~~~~~~iP~v~I~~~~g~~l~~y~~~~~~~~~~ 125 (126)
T cd02120 77 GAGMILANDPTDGLDVVADAHVLPAVHVDYEDGTAILSYINSTSNPTAT 125 (126)
T ss_pred CcEEEEEecCCCCceecccccccceEEECHHHHHHHHHHHHcCCCccee
Confidence 9999999987643333333467999999999999999999987665554
No 48
>cd04816 PA_SaNapH_like PA_SaNapH_like: Protease-associated domain containing proteins like Streptomyces anulatus N-acetylpuromycin N-acetylhydrolase (SaNapH).This group contains various PA domain-containing proteins similar SaNapH. Proteins in this group belong to the peptidase M28 family. NapH is a terminal enzyme in the puromycin biosynthetic pathway; NapH hydrolyzes N-acetylpuromycin to the active antibiotic. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate.
Probab=99.55 E-value=1.7e-14 Score=125.74 Aligned_cols=88 Identities=18% Similarity=0.174 Sum_probs=74.6
Q ss_pred CCCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCC---cccc--CCCcccEEEEcHHHHHHHH
Q 009592 409 NQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGN---EYSY--DAHYLPATAVLYDDAIKIH 483 (531)
Q Consensus 409 ~~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~---~~~~--~~~~iP~~~Is~~dG~~L~ 483 (531)
..|++.+++..+++|||+||+||.|+|.+|+++|+++||+++||||+.+... .+.. ....||+++|++++|+.|+
T Consensus 30 ~gC~~~~~~~~~~~GkIvLv~rg~c~f~~K~~~A~~aGA~avIi~n~~~~~~~~~~~~~~~~~~~iP~~~Is~~~G~~l~ 109 (122)
T cd04816 30 AGCDASDYDGLDVKGAIVLVDRGGCPFADKQKVAAARGAVAVIVVNNSDGGGTAGTLGAPNIDLKVPVGVITKAAGAALR 109 (122)
T ss_pred cCCCccccCCCCcCCeEEEEECCCCCHHHHHHHHHHCCCcEEEEEeCCCCccccccccCCCCCCeeeEEEEcHHHHHHHH
Confidence 5699888877899999999999999999999999999999999999876321 1111 3457999999999999999
Q ss_pred HHHHcCCCceEEE
Q 009592 484 EYIKSTNNPTAII 496 (531)
Q Consensus 484 ~~i~~~~~~~~~i 496 (531)
++++++.+++++|
T Consensus 110 ~~l~~g~~v~~~~ 122 (122)
T cd04816 110 RRLGAGETLELDA 122 (122)
T ss_pred HHHcCCCEEEEeC
Confidence 9999998776653
No 49
>cd02126 PA_EDEM3_like PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins. This group contains various PA domain-containing proteins similar to mouse EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein). EDEM3 contains a region, similar to Class I alpha-mannosidases (gylcosyl hydrolase family 47), N-terminal to the PA domain. EDEM3 accelerates glycoprotein ERAD (ER-associated degradation). In transfected mammalian cells, overexpression of EDEM3 enhances the mannose trimming from the N-glycans, of a model misfolded protein [alpha1-antitrypsin null (Hong Kong)] as well as, from total glycoproteins. Mannose trimming appears to be involved in the selection of ERAD substrates. EDEM3 has a different specificity of trimming than ER alpha-mannosidase 1. The significance of the PA domain to EDEM3 has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or pr
Probab=99.52 E-value=4.4e-14 Score=123.41 Aligned_cols=87 Identities=25% Similarity=0.358 Sum_probs=72.0
Q ss_pred cCCCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCC-----Ccc--cc-----CCCcccEEEEc
Q 009592 408 TNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANG-----NEY--SY-----DAHYLPATAVL 475 (531)
Q Consensus 408 a~~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~-----~~~--~~-----~~~~iP~~~Is 475 (531)
...|.+... +.+++|||+|++||.|+|.+|+++|+++||++|||||+.+.. ..+ .. +...||+++|+
T Consensus 27 ~~gC~~~~~-~~~~~gkIaLv~RG~C~f~~K~~~Aq~aGA~avII~n~~~~~~~~~~~~~~m~~~~~~~~~~~IP~v~I~ 105 (126)
T cd02126 27 YRACSEITN-AEEVKGKIAIMERGDCMFVEKARRVQKAGAIGGIVIDNNEGSSSDTAPMFAMSGDGDSTDDVTIPVVFLF 105 (126)
T ss_pred hhcccCCCC-ccccCceEEEEECCCCcHHHHHHHHHHCCCcEEEEEECCCCccccccceeEeecCCCCCCCCeEEEEEEE
Confidence 467987653 667999999999999999999999999999999999986542 111 11 24589999999
Q ss_pred HHHHHHHHHHHHcCCCceEE
Q 009592 476 YDDAIKIHEYIKSTNNPTAI 495 (531)
Q Consensus 476 ~~dG~~L~~~i~~~~~~~~~ 495 (531)
+++|+.|+++++++..+++.
T Consensus 106 ~~dG~~L~~~l~~~~~~~~~ 125 (126)
T cd02126 106 SKEGSKLLAAIKEHQNVEVL 125 (126)
T ss_pred HHHHHHHHHHHHhCCceEEe
Confidence 99999999999999887765
No 50
>cd02132 PA_GO-like PA_GO-like: Protease-associated domain containing proteins like Arabidopsis thaliana growth-on protein GRO10. This group contains various PA domain-containing proteins similar to the functionally uncharacterized Arabidopsis GRO10. The PA domain may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate.
Probab=99.50 E-value=7.2e-14 Score=124.22 Aligned_cols=85 Identities=15% Similarity=0.211 Sum_probs=70.7
Q ss_pred cCCCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCCccc------cCCCcccEEEEcHHHHHH
Q 009592 408 TNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYS------YDAHYLPATAVLYDDAIK 481 (531)
Q Consensus 408 a~~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~~~~------~~~~~iP~~~Is~~dG~~ 481 (531)
...|.+.+ .+++|||+||+||+|+|.+|++||+++||++|||||+.+....+. .....||+++|++++|+.
T Consensus 48 ~~gC~~~~---~~~~g~IvLV~RG~C~F~~K~~nA~~aGA~avIv~n~~~~~~~~~~~~~~~~~~~~IP~v~Is~~~G~~ 124 (139)
T cd02132 48 LDCCSPST---SKLSGSIALVERGECAFTEKAKIAEAGGASALLIINDQEELYKMVCEDNDTSLNISIPVVMIPQSAGDA 124 (139)
T ss_pred ccccCCCC---cccCCeEEEEECCCCCHHHHHHHHHHcCCcEEEEEECCCcccccccCCCCCCCCCcEeEEEecHHHHHH
Confidence 35798764 479999999999999999999999999999999999865322211 113589999999999999
Q ss_pred HHHHHHcCCCceEE
Q 009592 482 IHEYIKSTNNPTAI 495 (531)
Q Consensus 482 L~~~i~~~~~~~~~ 495 (531)
|+++++++..++++
T Consensus 125 L~~~l~~g~~Vtv~ 138 (139)
T cd02132 125 LNKSLDQGKKVEVL 138 (139)
T ss_pred HHHHHHcCCcEEEe
Confidence 99999999877664
No 51
>cd02125 PA_VSR PA_VSR: Protease-associated (PA) domain-containing plant vacuolar sorting receptor (VSR). This group includes various PA domain-containing VSRs such as garden pea BP-80, pumpkin PV72, and various Arabidopsis VSRs including AtVSR1. In contrast to most eukaryotes, which only have one or two VSRs, plants have several. This may in part be a reflection of having a more complex vacuolar system with both lytic vacuoles and storage vacuoles. The lytic vacuole is thought to be equivalent to the mammalian lysosome and the yeast vacuole. Pea BP-80 is a type 1 transmembrane protein, involved in the targeting of proteins to the lytic vacuole; it has been suggested that this protein also mediates targeting to the storage vacuole. PV72 and AtVSR1 may mediate transport of seed storage proteins to protein storage vacuoles. The significance of the PA domain to VSRs has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may partic
Probab=99.49 E-value=9.7e-14 Score=121.04 Aligned_cols=88 Identities=15% Similarity=0.200 Sum_probs=70.3
Q ss_pred CCCCCCCCC--CC----cccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCC-ccc----------cCCCcccE
Q 009592 409 NQCLPGSLT--PE----KVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGN-EYS----------YDAHYLPA 471 (531)
Q Consensus 409 ~~c~~~~~~--~~----~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~-~~~----------~~~~~iP~ 471 (531)
..|.+.+.. +. ...+||+|++||+|+|.+|+.+|+++||++|||||+.+... .+. .....||+
T Consensus 23 ~gC~~~~~~~~~~~~~~~~~~~IvLv~RG~C~F~~K~~~Aq~aGA~avII~n~~~~~~~~m~~~~~~~~~~~~~~i~IP~ 102 (127)
T cd02125 23 TGCKEFDVFFKPKKSEPGRRPVILLLDRGGCFFTLKAWNAQQAGAAAVLVADNVDEPLLTMDTPEESGSADYIEKITIPS 102 (127)
T ss_pred ccCCCCcccccccccccCCCceEEEEECCCcCHHHHHHHHHHCCCcEEEEEECCCCccccccCcccccccccCCCceEeE
Confidence 568866442 22 37889999999999999999999999999999999966421 110 12346999
Q ss_pred EEEcHHHHHHHHHHHHcCCCceEEE
Q 009592 472 TAVLYDDAIKIHEYIKSTNNPTAII 496 (531)
Q Consensus 472 ~~Is~~dG~~L~~~i~~~~~~~~~i 496 (531)
++|++++|+.|+++++++..+++++
T Consensus 103 v~Is~~~G~~L~~~l~~g~~V~v~~ 127 (127)
T cd02125 103 ALITKAFGEKLKKAISNGEMVVIKL 127 (127)
T ss_pred EEECHHHHHHHHHHHhcCCeEEEeC
Confidence 9999999999999999998877653
No 52
>cd02130 PA_ScAPY_like PA_ScAPY_like: Protease-associated domain containing proteins like Saccharomyces cerevisiae aminopeptidase Y (ScAPY). This group contains various PA domain-containing proteins similar to the S. cerevisiae APY, including Trichophyton rubrum leucine aminopeptidase 1(LAP1). Proteins in this group belong to the peptidase M28 family. ScAPY hydrolyzes amino acid-4-methylcoumaryl-7-amides (MCAs). ScAPY more rapidly hydrolyzes dipeptidyl-MCAs. Hydrolysis of amino acid-MCAs or dipeptides is stimulated by Co2+ while the hydrolysis of dipeptidyl-MCAs, tripeptides, and longer peptides is inhibited by Co2+. ScAPY is vacuolar and is activated by proteolytic processing. LAP1 is a secreted leucine aminopeptidase. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stab
Probab=99.48 E-value=1.2e-13 Score=120.42 Aligned_cols=87 Identities=21% Similarity=0.262 Sum_probs=72.0
Q ss_pred CCCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCCc---c-ccCCCcccEEEEcHHHHHHHHH
Q 009592 409 NQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE---Y-SYDAHYLPATAVLYDDAIKIHE 484 (531)
Q Consensus 409 ~~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~~---~-~~~~~~iP~~~Is~~dG~~L~~ 484 (531)
..|.+.++ +.+++|||+|++||.|+|.+|+++|+++||++|||||+...+.. . ..+...||+++|++++|+.|++
T Consensus 32 ~gC~~~~~-~~~~~gkIvlv~rg~c~f~~K~~~A~~aGA~~vIv~n~~~~~~~~~~~~~~~~~~Ip~v~Is~~~G~~L~~ 110 (122)
T cd02130 32 LGCDAADY-PASVAGNIALIERGECPFGDKSALAGAAGAAAAIIYNNVPAGGLSGTLGEPSGPYVPTVGISQEDGKALVA 110 (122)
T ss_pred CCCCcccC-CcCCCCEEEEEECCCCCHHHHHHHHHHCCCcEEEEEECCCCcccccccCCCCCCEeeEEEecHHHHHHHHH
Confidence 36887665 46799999999999999999999999999999999998732211 1 1224579999999999999999
Q ss_pred HHHcCCCceEEE
Q 009592 485 YIKSTNNPTAII 496 (531)
Q Consensus 485 ~i~~~~~~~~~i 496 (531)
++++++++++++
T Consensus 111 ~l~~g~~v~~~~ 122 (122)
T cd02130 111 ALANGGEVSANL 122 (122)
T ss_pred HHhcCCcEEEeC
Confidence 999998887764
No 53
>cd04818 PA_subtilisin_1 PA_subtilisin_1: Protease-associated domain containing subtilisin-like proteases, subgroup 1. A subgroup of PA domain-containing subtilisin-like proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following subtilisin-like proteases: i) melon cucumisin, ii) Arabidopsis thaliana Ara12, iii) Alnus glutinosa ag12, iv) members of the tomato P69 family, and v) tomato LeSBT2. However, these proteins belong to other subtilisin-like subgroups. Relatively little is known about proteins in this subgroup.
Probab=99.48 E-value=1.7e-13 Score=118.81 Aligned_cols=90 Identities=21% Similarity=0.279 Sum_probs=73.9
Q ss_pred cccCCCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCCc--cc--cCCCcccEEEEcHHHHHH
Q 009592 406 NETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE--YS--YDAHYLPATAVLYDDAIK 481 (531)
Q Consensus 406 ~~a~~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~~--~~--~~~~~iP~~~Is~~dG~~ 481 (531)
.....|.+..+ .++++|||+||+||.|+|.+|+.+|+++||+++||||+...... +. .....||+++|++++|+.
T Consensus 25 ~~~~~C~~~~~-~~~v~GkIvL~~rg~c~f~~k~~~a~~aGA~gvIi~~~~~~~~~~~~~~~~~~~~iP~v~V~~~~g~~ 103 (118)
T cd04818 25 SNTDGCTAFTN-AAAFAGKIALIDRGTCNFTVKVLNAQNAGAIAVIVANNVAGGAPITMGGDDPDITIPAVMISQADGDA 103 (118)
T ss_pred CcccccCCCCc-CCCCCCEEEEEECCCCCHHHHHHHHHHCCCeEEEEEECCCCCcceeccCCCCCCEEeEEEecHHHHHH
Confidence 34467988776 45699999999999999999999999999999999998764211 11 123579999999999999
Q ss_pred HHHHHHcCCCceEEE
Q 009592 482 IHEYIKSTNNPTAII 496 (531)
Q Consensus 482 L~~~i~~~~~~~~~i 496 (531)
|+++++++.++++++
T Consensus 104 l~~~l~~g~~v~v~~ 118 (118)
T cd04818 104 LKAALAAGGTVTVTL 118 (118)
T ss_pred HHHHHhcCCcEEEeC
Confidence 999999988777653
No 54
>cd02124 PA_PoS1_like PA_PoS1_like: Protease-associated (PA) domain PoS1-like. This group includes various PA domain-containing proteins similar to Pleurotus ostreatus (Po)S1. PoSl, the main extracellular protease in P. ostreatus is a subtilisin-like serine protease belonging to the peptidase S8 family. Ca2+ and Mn2+ both stimulate the protease activity of (Po)S1. Ca2+ protects PoS1 from autolysis. PoS1 is a monomeric glycoprotein, which may play a role in the regulation of laccases in lignin formation. (Po)S1 participates in the degradation of POXA1b, and in the activation of POXA3, (POXA1b and POXA3 are laccase isoenzymes), but its effect may be indirect. The significance of the PA domain to PoS1 has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate.
Probab=99.48 E-value=1.6e-13 Score=119.99 Aligned_cols=101 Identities=19% Similarity=0.174 Sum_probs=76.7
Q ss_pred ceeEEecccCCCCcCccccCCCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCCc-cccCCCc
Q 009592 390 HPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE-YSYDAHY 468 (531)
Q Consensus 390 ~~~~~gts~a~p~v~~~~a~~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~~-~~~~~~~ 468 (531)
++++..+.. .......|++.+.+..+++|||+||+||+|+|.+|+++|+++||++|||||+.+.... ...+...
T Consensus 28 ~p~~~~~~~-----~~~~~~gC~~~~~~~~~~~g~IaLv~rg~c~f~~K~~nA~~aGA~aviiyn~~~~~~~~~~~~~~~ 102 (129)
T cd02124 28 LPLWALSLD-----TSVADDACQPLPDDTPDLSGYIVLVRRGTCTFATKAANAAAKGAKYVLIYNNGSGPTDQVGSDADS 102 (129)
T ss_pred ceEEEeecc-----cCCCcccCcCCCcccccccCeEEEEECCCCCHHHHHHHHHHcCCcEEEEEECCCCcccccCCCCcc
Confidence 566554321 2234467997766656899999999999999999999999999999999998764322 1223345
Q ss_pred ccEEEEcHHHHHHHHHHHHcCCCceEEE
Q 009592 469 LPATAVLYDDAIKIHEYIKSTNNPTAII 496 (531)
Q Consensus 469 iP~~~Is~~dG~~L~~~i~~~~~~~~~i 496 (531)
+|.+++ +++|++|++.++++..++++|
T Consensus 103 ~~~~~~-~~~G~~l~~~l~~G~~vtv~f 129 (129)
T cd02124 103 IIAAVT-PEDGEAWIDALAAGSNVTVDF 129 (129)
T ss_pred eeeEEe-HHHHHHHHHHHhcCCeEEEeC
Confidence 666666 999999999999998777654
No 55
>cd04817 PA_VapT_like PA_VapT_like: Protease-associated domain containing proteins like VapT from Vibrio metschnikovii strain RH530. This group contains various PA domain-containing proteins similar to V. metschnikovii VapT, including the serine alkaline protease SapSh from the psychotroph Shewanella strain Ac10 and the Apa1 protease from the psychrotroph Pseudoalteromonas Sp. As-11. VapT is a sodium dodecyl sulfate (SDS) resistant extracellular alkaline serine protease showing high activity over a broad pH range and temperature. SapSh has a high level of protease activity at low temperatures. Apa1 is also cold-adapted. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate.
Probab=99.45 E-value=2.5e-13 Score=119.50 Aligned_cols=76 Identities=20% Similarity=0.216 Sum_probs=63.0
Q ss_pred CCCCCcccceEEEEeeCCCc-----cchhhhHHHhcCceEEEEecCC--CCCC--cccc--CCCcccEEEEcHHHHHHHH
Q 009592 415 SLTPEKVKGKIVLCMRGSGF-----KLSKGMEVKRAGGVGLILGNSP--ANGN--EYSY--DAHYLPATAVLYDDAIKIH 483 (531)
Q Consensus 415 ~~~~~~~~gkIvLi~rG~c~-----~~~K~~na~~aGA~gVIiynn~--~~~~--~~~~--~~~~iP~~~Is~~dG~~L~ 483 (531)
++.+.+++|||+||+||.|+ |.+|+++|+++||++||||||. ++.. .+.. +...||+++|++++|++|+
T Consensus 49 d~~~~d~~GkIaLI~RG~c~~~~~~f~~Kv~~A~~aGA~avIIyNn~~~~g~~~~~lg~~~~~~~IP~v~is~~dG~~L~ 128 (139)
T cd04817 49 SYICGGMAGKICLIERGGNSKSVYPEIDKVKACQNAGAIAAIVYSNAALAGLQNPFLVDTNNDTTIPSVSVDRADGQALL 128 (139)
T ss_pred cccCCCcCccEEEEECCCCCCCcccHHHHHHHHHHCCCeEEEEEeCCCCCCcccccccCCCCCceEeEEEeeHHHHHHHH
Confidence 34566899999999999999 9999999999999999999997 4311 2222 2468999999999999999
Q ss_pred HHHHcCC
Q 009592 484 EYIKSTN 490 (531)
Q Consensus 484 ~~i~~~~ 490 (531)
+++.++.
T Consensus 129 ~~l~~~~ 135 (139)
T cd04817 129 AALGQST 135 (139)
T ss_pred HHhcCCC
Confidence 9886653
No 56
>cd04813 PA_1 PA_1: Protease-associated (PA) domain subgroup 1. A subgroup of PA-domain containing proteins. Proteins in this subgroup contain a RING-finger (Really Interesting New Gene) domain C-terminal to this PA domain. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins in this group contain a C-terminal RING-finger domain. Proteins into which the PA domain is inserted include the following: i) various signal peptide peptidases: such as hSPPL2a and 2b, ii) various E3 ubiquitin ligases similar to human GRAIL (gene related to anergy in lymphocytes) protein, iii) various proteins containing a RING finger motif such as Arabid
Probab=99.42 E-value=5.8e-13 Score=114.36 Aligned_cols=79 Identities=20% Similarity=0.286 Sum_probs=65.5
Q ss_pred CCCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCC--ccc----cCCCcccEEEEcHHHHHHH
Q 009592 409 NQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGN--EYS----YDAHYLPATAVLYDDAIKI 482 (531)
Q Consensus 409 ~~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~--~~~----~~~~~iP~~~Is~~dG~~L 482 (531)
..|++. +.++++|||+|++||+|+|.+|+.+|+++||++|||||+.+... .+. ....+||+++|++++|++|
T Consensus 28 ~gC~~~--~~~~l~gkIvLV~RG~CsF~~K~~nAq~aGA~avII~n~~~~~~~~~m~~~~~~~~v~IPav~Is~~~g~~L 105 (117)
T cd04813 28 DACSLQ--EHAEIDGKVALVLRGGCGFLDKVMWAQRRGAKAVIVGDDEPGRGLITMFSNGDTDNVTIPAMFTSRTSYHLL 105 (117)
T ss_pred CCCCCC--CcCCcCCeEEEEECCCCCHHHHHHHHHHCCCcEEEEEECCCcccceecccCCCCCCcEEEEEEEcHHHHHHH
Confidence 579866 56889999999999999999999999999999999999876321 111 2235899999999999999
Q ss_pred HHHHHcC
Q 009592 483 HEYIKST 489 (531)
Q Consensus 483 ~~~i~~~ 489 (531)
+.++.+.
T Consensus 106 ~~l~~~~ 112 (117)
T cd04813 106 SSLLPKS 112 (117)
T ss_pred HHhcccc
Confidence 9887654
No 57
>PF02225 PA: PA domain; InterPro: IPR003137 The PA (Protease associated) domain is found as an insert domain in diverse proteases, which include the MEROPS peptidase families A22B, M28, and S8A []. The PA domain is also found in a plant vacuolar sorting receptor O22925 from SWISSPROT and members of the RZF family, e.g. O43567 from SWISSPROT.; PDB: 3EIF_A 1XF1_B 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A ....
Probab=99.39 E-value=2.9e-13 Score=113.77 Aligned_cols=78 Identities=33% Similarity=0.495 Sum_probs=62.9
Q ss_pred CCCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCC----ccccCCCcccEEEEcHHHHHHHHH
Q 009592 409 NQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGN----EYSYDAHYLPATAVLYDDAIKIHE 484 (531)
Q Consensus 409 ~~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~----~~~~~~~~iP~~~Is~~dG~~L~~ 484 (531)
..|.+.+....+++||||||+||.|+|.+|+.+|+++||+|+||||...... ........||+++|++++|+.|++
T Consensus 20 ~~~~~~~~~~~~~~gkIvlv~rg~~~~~~k~~~a~~~GA~gvIi~~~~~~~~~~~~~~~~~~~~iP~v~I~~~~g~~L~~ 99 (101)
T PF02225_consen 20 GDCCPSDYNGSDVKGKIVLVERGSCSFDDKVRNAQKAGAKGVIIYNPPPNNGSMIDSEDPDPIDIPVVFISYEDGEALLA 99 (101)
T ss_dssp CHHHHHHTSTSTCTTSEEEEESTSSCHHHHHHHHHHTTESEEEEE-TSCSCTTTTCEBTTTSTBSEEEEE-HHHHHHHHH
T ss_pred ccccccccCCccccceEEEEecCCCCHHHHHHHHHHcCCEEEEEEeCCccccCcccccCCCCcEEEEEEeCHHHHhhhhc
Confidence 3466667788899999999999999999999999999999999999222111 223345799999999999999999
Q ss_pred HH
Q 009592 485 YI 486 (531)
Q Consensus 485 ~i 486 (531)
++
T Consensus 100 ~i 101 (101)
T PF02225_consen 100 YI 101 (101)
T ss_dssp HH
T ss_pred cC
Confidence 85
No 58
>cd02123 PA_C_RZF_like PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like. This group includes various PA domain-containing proteins similar to C-RZF (chicken embryo RING zinc finger) protein. These proteins contain a C3H2C3 RING finger. C-RZF is expressed in embryo cells and is restricted mainly to brain and heart, it is localized to both the nucleus and endosomes. Additional C3H2C3 RING finger proteins belonging to this group, include Arabidopsis ReMembR-H2 protein and mouse sperizin. ReMembR-H2 is likely to be an integral membrane protein, and to traffic through the endosomal pathway. Sperizin is expressed in haploid germ cells and localized in the cytoplasm, it may participate in spermatogenesis. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and acce
Probab=99.39 E-value=9.4e-13 Score=118.91 Aligned_cols=84 Identities=24% Similarity=0.200 Sum_probs=69.7
Q ss_pred cCCCCCCCCCC---CcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCC-Ccccc-----CCCcccEEEEcHHH
Q 009592 408 TNQCLPGSLTP---EKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANG-NEYSY-----DAHYLPATAVLYDD 478 (531)
Q Consensus 408 a~~c~~~~~~~---~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~-~~~~~-----~~~~iP~~~Is~~d 478 (531)
...|.+....+ .++.|||+|++||+|+|.+|+.+|+++||++|||||+.... ..+.. ....||+++|++++
T Consensus 50 ~~gC~~~~~~~~~~~~~~g~IvLV~RG~CtF~~Kv~nAq~aGA~avII~n~~~~~~~~m~~~~~~~~~v~IP~v~Is~~d 129 (153)
T cd02123 50 LNACSPIENPPLNSNASGSFIVLIRRGNCSFETKVRNAQRAGYKAAIVYNDESNDLISMSGNDQEIKGIDIPSVFVGKST 129 (153)
T ss_pred cccCCCCcccccccccCCCeEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCcceeccCCCCCCcCCEEEEEEeeHHH
Confidence 45798766533 78999999999999999999999999999999999986532 12211 14589999999999
Q ss_pred HHHHHHHHHcCCC
Q 009592 479 AIKIHEYIKSTNN 491 (531)
Q Consensus 479 G~~L~~~i~~~~~ 491 (531)
|+.|+++++.+..
T Consensus 130 g~~L~~~l~~~~~ 142 (153)
T cd02123 130 GEILKKYASYEKG 142 (153)
T ss_pred HHHHHHHHhcCCc
Confidence 9999999998765
No 59
>cd00538 PA PA: Protease-associated (PA) domain. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following: i) various signal peptide peptidases including, hSPPL2a and 2b which catalyze the intramembrane proteolysis of tumor necrosis factor alpha, ii) various proteins containing a C3H2C3 RING finger including, Arabidopsis ReMembR-H2 protein and various E3 ubiquitin ligases such as human GRAIL (gene related to anergy in lymphocytes), iii) EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein), iv) various plant vacuolar sorting receptors such as Pisum sativum BP-80, v) g
Probab=99.36 E-value=2.1e-12 Score=113.01 Aligned_cols=87 Identities=23% Similarity=0.292 Sum_probs=72.4
Q ss_pred CCCCCCC--CCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCC-ccc-----cCCCcccEEEEcHHHHH
Q 009592 409 NQCLPGS--LTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGN-EYS-----YDAHYLPATAVLYDDAI 480 (531)
Q Consensus 409 ~~c~~~~--~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~-~~~-----~~~~~iP~~~Is~~dG~ 480 (531)
..|.... +...+++||||||+||.|+|.+|+.+|+++||+|+|||++..... ... .....||+++|++++|+
T Consensus 31 ~~C~~~~~~~~~~~~~GkIvl~~~g~~~~~~k~~~a~~~GA~gvii~~~~~~~~~~~~~~~~~~~~~~iP~~~is~~~g~ 110 (126)
T cd00538 31 VGCGYGTTDDSGADVKGKIVLVRRGGCSFSEKVKNAQKAGAKAVIIYNNGDDPGPQMGSVGLESTDPSIPTVGISYADGE 110 (126)
T ss_pred EEEecCcccccCCCccceEEEEECCCcCHHHHHHHHHHCCCEEEEEEECCCCcccccccccCCCCCCcEeEEEeCHHHHH
Confidence 4587766 667889999999999999999999999999999999999876321 111 13467999999999999
Q ss_pred HHHHHHHcCCCceEE
Q 009592 481 KIHEYIKSTNNPTAI 495 (531)
Q Consensus 481 ~L~~~i~~~~~~~~~ 495 (531)
.|+++++++.+++++
T Consensus 111 ~l~~~~~~~~~v~~~ 125 (126)
T cd00538 111 ALLSLLEAGKTVTVD 125 (126)
T ss_pred HHHHHHhcCCceEEe
Confidence 999999998776654
No 60
>cd04819 PA_2 PA_2: Protease-associated (PA) domain subgroup 2. A subgroup of PA-domain containing proteins. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins in this group contain a C-terminal RING-finger domain. Proteins into which the PA domain is inserted include the following: i) various signal peptide peptidases: such as hSPPL2a and 2b, ii) various E3 ubiquitin ligases similar to human GRAIL (gene related to anergy in lymphocytes) protein, iii) various proteins containing a RING finger motif such as Arabidopsis ReMembR-H2 protein, iv) EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein), v) various plant vacuola
Probab=99.23 E-value=6.1e-11 Score=103.92 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=65.5
Q ss_pred CCCCCcccceEEEEeeCCC--ccchhhhHHHhcCceEEEEecCCCCCCc----cc---cCCCcccEEEEcHHHHHHHHHH
Q 009592 415 SLTPEKVKGKIVLCMRGSG--FKLSKGMEVKRAGGVGLILGNSPANGNE----YS---YDAHYLPATAVLYDDAIKIHEY 485 (531)
Q Consensus 415 ~~~~~~~~gkIvLi~rG~c--~~~~K~~na~~aGA~gVIiynn~~~~~~----~~---~~~~~iP~~~Is~~dG~~L~~~ 485 (531)
++...+++|||||++|+.| +|.+|+++|+++||+|||+||+.+.... .. .....||++.|+++||+.|++.
T Consensus 37 d~~~~~v~GkIvlv~~g~~~~~~~~k~~~A~~~GA~avi~~~~~~g~~~~~~~~~~~~~~~~~IP~v~Is~edg~~L~~~ 116 (127)
T cd04819 37 DFDGLDLEGKIAVVKRDDPDVDRKEKYAKAVAAGAAAFVVVNTVPGVLPATGDEGTEDGPPSPIPAASVSGEDGLRLARV 116 (127)
T ss_pred HcCCCCCCCeEEEEEcCCCchhHHHHHHHHHHCCCEEEEEEeCCCCcCcccccccccCCCCCCCCEEEEeHHHHHHHHHH
Confidence 4446679999999999999 8999999999999999999988654221 11 1235799999999999999999
Q ss_pred HHcCCCceE
Q 009592 486 IKSTNNPTA 494 (531)
Q Consensus 486 i~~~~~~~~ 494 (531)
++.+..+.+
T Consensus 117 l~~g~~~~~ 125 (127)
T cd04819 117 AERNDTLVL 125 (127)
T ss_pred HhcCCceEe
Confidence 999865543
No 61
>cd04056 Peptidases_S53 Peptidase domain in the S53 family. Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-
Probab=99.16 E-value=9.5e-11 Score=121.33 Aligned_cols=103 Identities=25% Similarity=0.235 Sum_probs=81.5
Q ss_pred ceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHc---CCcEEEEeccCCCCC--CCcccHHHHHHHHH
Q 009592 250 TASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD---GVHVLSISIGTNQPF--AFNRDGIAIGALNA 324 (531)
Q Consensus 250 ~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~---g~~VIn~S~G~~~~~--~~~~~~~~~a~~~a 324 (531)
.+.||||+|+|+.++++++. ...++.++.+++.. +++|||||||..... ..+.+.+..++++|
T Consensus 82 ~~~gvAP~a~i~~~~~~~~~------------~~~~~~a~~~ai~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a 149 (361)
T cd04056 82 YAGAIAPGANITLYFAPGTV------------TNGPLLAFLAAVLDNPNLPSVISISYGEPEQSLPPAYAQRVCNLFAQA 149 (361)
T ss_pred HHHhccCCCeEEEEEECCcC------------ccHHHHHHHHHHHcCCCCCCEEEccCCccccccCHHHHHHHHHHHHHH
Confidence 45799999999999998642 34577888888887 999999999994322 12335677788999
Q ss_pred HhCCcEEEEecCCCCCCCC-----------CCCCCCCceeeeeccccCCCc
Q 009592 325 VKHNILVACSAGNSGPAPS-----------SLSNLAPWLITVGAGSLDRDF 364 (531)
Q Consensus 325 ~~~Gi~vV~AAGN~g~~~~-----------~~~~~~~~vitVgA~~~~~~~ 364 (531)
..+||+||+|+||+|...+ .+++..|+|++||+++.....
T Consensus 150 ~~~GitvvaAsGd~G~~~~~~~~~~~~~~~~~Pas~P~V~sVGgt~~~~~~ 200 (361)
T cd04056 150 AAQGITVLAASGDSGAGGCGGDGSGTGFSVSFPASSPYVTAVGGTTLYTGG 200 (361)
T ss_pred HhCCeEEEEeCCCCCCCCCCCCCCCCcccCCCCCCCCceeeeecccccCCC
Confidence 9999999999999997653 245678999999999876543
No 62
>cd04815 PA_M28_2 PA_M28_2: Protease-associated (PA) domain, peptidase family M28, subfamily-2. A subfamily of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subfamilies; relatively little is known a
Probab=99.00 E-value=1.2e-09 Score=96.65 Aligned_cols=81 Identities=19% Similarity=0.185 Sum_probs=65.8
Q ss_pred CCCCcccceEEEEeeCCC------ccchh-------hhHHHhcCceEEEEecCCCCCC------ccc--cCCCcccEEEE
Q 009592 416 LTPEKVKGKIVLCMRGSG------FKLSK-------GMEVKRAGGVGLILGNSPANGN------EYS--YDAHYLPATAV 474 (531)
Q Consensus 416 ~~~~~~~gkIvLi~rG~c------~~~~K-------~~na~~aGA~gVIiynn~~~~~------~~~--~~~~~iP~~~I 474 (531)
++..+++|||||++|+.| +|..| .+.|+++||+++|++|+.+... .+. .....||++.|
T Consensus 33 ~~~~~v~GKIvlv~~~~~~~~~~~~~~~k~~~r~~~~~~A~~~GA~avIv~s~~~~~~~~~~~G~~~~~~~~~~IP~v~i 112 (134)
T cd04815 33 APAGAVKGKIVFFNQPMVRTQTGSGYGPTVAYRRRGAVEAAKKGAVAVLIRSIGTDSHRSPHTGMMSYDDGVPKIPAAAI 112 (134)
T ss_pred cchhhcCCeEEEecCCccccCchhhcCchhhhhhHHHHHHHhCCCEEEEEEecCcccCCCCcCCccccCCCCCCCCEEEe
Confidence 345689999999999999 99999 7999999999999999643211 111 22356999999
Q ss_pred cHHHHHHHHHHHHcCCCceEEE
Q 009592 475 LYDDAIKIHEYIKSTNNPTAII 496 (531)
Q Consensus 475 s~~dG~~L~~~i~~~~~~~~~i 496 (531)
+++|++.|.+.++++..++++|
T Consensus 113 s~ed~~~L~r~l~~g~~v~~~l 134 (134)
T cd04815 113 SVEDADMLERLAARGKPIRVNL 134 (134)
T ss_pred chhcHHHHHHHHhCCCCeEEeC
Confidence 9999999999999998777653
No 63
>PF05922 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IPR010259 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. Limited proteolysis of most large protein precursors is carried out in vivo by the subtilisin-like pro-protein convertases. Many important biological processes such as peptide hormone synthesis, viral protein processing and receptor maturation involve proteolytic processing by these enzymes []. The subtilisin-serine protease (SRSP) family hormone and pro-protein convertases (furin, PC1/3, PC2, PC4, PACE4, PC5/6, and PC7/7/LPC) act within the secretory pathway to cleave polypeptide precursors at specific basic sites, generating their biologically active forms. Serum proteins, pro-hormones, receptors, zymogens, viral surface glycoproteins, bacterial toxins, amongst others, are activated by this route []. The SRSPs share the same domain structure, including a signal peptide, the pro-peptide, the catalytic domain, the P/middle or homo B domain, and the C terminus. Proteinase propeptide inhibitors (sometimes refered to as activation peptides) are responsible for the modulation of folding and activity of the pro-enzyme or zymogen. The pro-segment docks into the enzyme moiety shielding the substrate binding site, thereby promoting inhibition of the enzyme. Several such propeptides share a similar topology [], despite often low sequence identities []. The propeptide region has an open-sandwich antiparallel-alpha/antiparallel-beta fold, with two alpha-helices and four beta-strands with a (beta/alpha/beta)x2 topology. This group of sequences contain the propeptide domain at the N terminus of peptidases belonging to MEROPS family S8A, subtilisins. A number of the members of this group of sequences belong to MEROPS inhibitor family I9, clan I-. The propeptide is removed by proteolytic cleavage; removal activating the enzyme.; GO: 0004252 serine-type endopeptidase activity, 0042802 identical protein binding, 0043086 negative regulation of catalytic activity; PDB: 3CNQ_P 1SPB_P 3CO0_P 1ITP_A 1V5I_B 1SCJ_B 3P5B_P 2XTJ_P 2W2M_P 2P4E_P ....
Probab=98.94 E-value=3e-09 Score=85.61 Aligned_cols=77 Identities=34% Similarity=0.456 Sum_probs=56.1
Q ss_pred eEEEEecCCCCCCccchhhHHHHHHHHHHhhcch----hhhccceEEEeeeeeeeEEEEeCHHHHHHhhcCCCeEEEEeC
Q 009592 25 VYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNE----EEARASHLYSYKHSINGFSAVLTPDEAARLSELEEVVSVYPS 100 (531)
Q Consensus 25 ~yiV~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~g~s~~~~~~~~~~l~~~p~V~~v~~~ 100 (531)
+|||+|++.. ........+.+++.+++... .....++.+.|+..||||+++++++++++|+++|+|++|+||
T Consensus 1 ~YIV~~k~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gfs~~l~~~~i~~L~~~p~V~~Ve~D 76 (82)
T PF05922_consen 1 RYIVVFKDDA----SAASSFSSHKSWQASILKSALKSASSINAKVLYSYDNAFNGFSAKLSEEEIEKLRKDPGVKSVEPD 76 (82)
T ss_dssp EEEEEE-TTS----THHCHHHHHHHHHH----HHHHTH-TTT-EEEEEESSTSSEEEEEE-HHHHHHHHTSTTEEEEEEE
T ss_pred CEEEEECCCC----CcchhHHHHHHHHHHHHhhhhhhhcccCCceEEEEeeeEEEEEEEeCHHHHHHHHcCCCeEEEEeC
Confidence 6999999976 23334566666666543321 234578999999899999999999999999999999999999
Q ss_pred CCccccc
Q 009592 101 HPEKYSL 107 (531)
Q Consensus 101 ~p~~~~~ 107 (531)
. .+++
T Consensus 77 ~--~v~l 81 (82)
T PF05922_consen 77 Q--VVSL 81 (82)
T ss_dssp C--EEEE
T ss_pred c--eEec
Confidence 9 7765
No 64
>cd02128 PA_TfR PA_TfR: Protease-associated domain containing proteins like transferrin receptor (TfR). This group contains various PA domain-containing proteins similar to human TfR1 and TfR2. TfR1 and TfR2 are type II membrane proteins, belonging to the peptidase M28 family. TfR1 is homodimeric, widely expressed, and a key player in the uptake of iron-loaded transferrin (Tf) into cells. The TfR1 homodimer binds two molecules of Tf and this complex is internalized. In addition to its role in iron uptake, TfR1 may participate in cell growth and proliferation. TfR2 also binds Tf but with a significantly lower affinity than does TfR1. TfR2 is expressed chiefly in hepatocytes, hematopoietic cells, and duodenal crypt cells; its expression overlaps with that of hereditary hemochromatosis protein (HFE). TfR2 is involved in iron homeostasis. HFE and TfR2 interact in cells. By one model for serum iron sensing, at low or basal iron concentrations, HFE and TFR1 form a complex at the plasma membra
Probab=98.58 E-value=8.1e-08 Score=88.25 Aligned_cols=72 Identities=24% Similarity=0.349 Sum_probs=57.6
Q ss_pred CCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCC------------------CCcccc-------------C-
Q 009592 418 PEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPAN------------------GNEYSY-------------D- 465 (531)
Q Consensus 418 ~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~------------------~~~~~~-------------~- 465 (531)
..+++|||+|++||.|.+.+|+++|+++||+|||||++... +..+.+ +
T Consensus 51 gv~v~GkIvLvr~G~~~~~~Kv~~A~~~GA~gvIiy~Dp~d~~~~~~~~~~~g~~~~~~GDplTPG~ps~~~~~~~~~~~ 130 (183)
T cd02128 51 GVSVNGSVVLVRAGKISFAEKVANAEKLGAVGVLIYPDPADFPIDPSETALFGHVHLGTGDPYTPGFPSFNHTQFPPSQS 130 (183)
T ss_pred CCCCCCeEEEEECCCCCHHHHHHHHHHCCCEEEEEecCHHHcCcccCcceeecceeccCCCcCCCCCccccccccCcccc
Confidence 55799999999999999999999999999999999998421 000000 0
Q ss_pred --CCcccEEEEcHHHHHHHHHHHHcC
Q 009592 466 --AHYLPATAVLYDDAIKIHEYIKST 489 (531)
Q Consensus 466 --~~~iP~~~Is~~dG~~L~~~i~~~ 489 (531)
-..||++-||+++++.|++.+.-.
T Consensus 131 ~~lP~IPs~PIS~~da~~lL~~l~G~ 156 (183)
T cd02128 131 SGLPNIPAQTISAAAAAKLLSKMGGP 156 (183)
T ss_pred cCCCCCCEeccCHHHHHHHHHHcCCC
Confidence 136899999999999999987543
No 65
>KOG2442 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only]
Probab=98.43 E-value=5.9e-07 Score=91.70 Aligned_cols=87 Identities=20% Similarity=0.256 Sum_probs=70.4
Q ss_pred CCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCCcc------ccCCCcccEEEEcHHHHHHHH
Q 009592 410 QCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEY------SYDAHYLPATAVLYDDAIKIH 483 (531)
Q Consensus 410 ~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~~~------~~~~~~iP~~~Is~~dG~~L~ 483 (531)
.|++. ...+++|++++.||+|.|.+|++.|+++||.+.+|.|+.++-... ......||+++|++++++.|.
T Consensus 86 ~cs~~---~~kl~~~~~~v~RGnC~Ft~Ka~~Aq~aGAsaLliin~~~d~~~~~~~~~~~~~dv~IPv~mi~~~~~~~l~ 162 (541)
T KOG2442|consen 86 SCSTL---QSKLSGKVALVFRGNCSFTEKAKLAQAAGASALLIINNKKDLLFMPCGNKETSLDVTIPVAMISYSDGRDLN 162 (541)
T ss_pred ccCCC---CccccceeEEEecccceeehhhhhhhhcCceEEEEEcCchhhccCCCCCCCccccccceEEEEEhhhHHHHH
Confidence 46543 345899999999999999999999999999999999996532211 223478999999999999999
Q ss_pred HHHHcCCCceEEEEeC
Q 009592 484 EYIKSTNNPTAIIKQA 499 (531)
Q Consensus 484 ~~i~~~~~~~~~i~~~ 499 (531)
+....+.++++.+-..
T Consensus 163 ~~~~~~~~V~~~lYaP 178 (541)
T KOG2442|consen 163 KSTRSNDNVELALYAP 178 (541)
T ss_pred hhhccCCeEEEEEECC
Confidence 9888888777776543
No 66
>KOG3920 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only]
Probab=98.22 E-value=7.3e-07 Score=77.54 Aligned_cols=91 Identities=20% Similarity=0.158 Sum_probs=72.1
Q ss_pred cCCCCCCCCCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCCc------cccC----CCcccEEEEcHH
Q 009592 408 TNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE------YSYD----AHYLPATAVLYD 477 (531)
Q Consensus 408 a~~c~~~~~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~~------~~~~----~~~iP~~~Is~~ 477 (531)
-.+|.... +.-++.|.|+|++||+|+|..|..+++++||.++||-++.....+ +..+ ..+||++++-..
T Consensus 74 p~aC~elr-N~~f~~d~vaL~eRGeCSFl~Ktl~~e~aGa~aiiitd~~~~~~sf~~YveMI~D~sq~~AniPa~fllg~ 152 (193)
T KOG3920|consen 74 PHACEELR-NEIFAPDSVALMERGECSFLVKTLNGEKAGATAIIITDSQNYEYSFHQYVEMIPDESQDRANIPAVFLLGV 152 (193)
T ss_pred hhHHHHHh-hcccCCCcEEEEecCCceeeehhhhhhhcCceEEEEecCCCCchhHHHHHHhcCcccccccCCceEEEecc
Confidence 35687643 455678999999999999999999999999999999988653321 2222 379999999999
Q ss_pred HHHHHHHHHHcCCCceEEEEeC
Q 009592 478 DAIKIHEYIKSTNNPTAIIKQA 499 (531)
Q Consensus 478 dG~~L~~~i~~~~~~~~~i~~~ 499 (531)
+|-.++..++.....-+.|+..
T Consensus 153 ~Gy~ir~sL~r~~r~ha~i~IP 174 (193)
T KOG3920|consen 153 TGYYIRVSLKRYFRDHAKIDIP 174 (193)
T ss_pred ceEEEehhHHHhCCccEEEecc
Confidence 9999999888877776666543
No 67
>cd04814 PA_M28_1 PA_M28_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1. A subfamily of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subfamilies, relatively little is known a
Probab=98.20 E-value=4.8e-06 Score=73.68 Aligned_cols=77 Identities=19% Similarity=0.162 Sum_probs=57.8
Q ss_pred CCCCCCCCCCCcccceEEEEeeCCC------------------ccchhhhHHHhcCceEEEEecCCCCCCc----ccc-C
Q 009592 409 NQCLPGSLTPEKVKGKIVLCMRGSG------------------FKLSKGMEVKRAGGVGLILGNSPANGNE----YSY-D 465 (531)
Q Consensus 409 ~~c~~~~~~~~~~~gkIvLi~rG~c------------------~~~~K~~na~~aGA~gVIiynn~~~~~~----~~~-~ 465 (531)
..|...++...|++|||||+.||.| ++..|.++|+++||+|||++++.+.... +.. .
T Consensus 34 ~~~~~dDYag~DVkGKIVlv~~g~P~~~~~~~~~~~~~~~~~~~~~~K~~~A~~~GA~gvIii~~~~~~~~p~~~~~~~~ 113 (142)
T cd04814 34 PELSWDDYAGLDVKGKVVVVLRNDPQGEPGAGDFGGKAMTYYGRWTYKYEEAARHGAAGVLIVHELAPASYGWATWKNPA 113 (142)
T ss_pred CCCChhhcCCCCCCCcEEEEEcCCCCcccccccccccccccccCHHHHHHHHHHCCCcEEEEEeCCCcccCChhhhhccc
Confidence 3587778888899999999999999 4678999999999999999999763222 111 1
Q ss_pred CCccc-EEEEcHHHHHHHHHH
Q 009592 466 AHYLP-ATAVLYDDAIKIHEY 485 (531)
Q Consensus 466 ~~~iP-~~~Is~~dG~~L~~~ 485 (531)
...++ ...|+...+.+|.+.
T Consensus 114 ~~~~~~~~~i~~~~a~~l~~~ 134 (142)
T cd04814 114 KVHPNLEAAIQRAVAVDLFEA 134 (142)
T ss_pred ccCCceeeEecHHHHHHHHhh
Confidence 22343 466888888877663
No 68
>cd04822 PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 3. A subgroup of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subgroups; relatively litt
Probab=98.18 E-value=6.2e-06 Score=73.78 Aligned_cols=80 Identities=20% Similarity=0.113 Sum_probs=58.6
Q ss_pred CCCCCCCCCCCcccceEEEEeeCC------------------CccchhhhHHHhcCceEEEEecCCCCCC---ccccCCC
Q 009592 409 NQCLPGSLTPEKVKGKIVLCMRGS------------------GFKLSKGMEVKRAGGVGLILGNSPANGN---EYSYDAH 467 (531)
Q Consensus 409 ~~c~~~~~~~~~~~gkIvLi~rG~------------------c~~~~K~~na~~aGA~gVIiynn~~~~~---~~~~~~~ 467 (531)
..|...++..-|++||||||.|+. |++..|+++|+++||++||+|++..... ...+.-.
T Consensus 34 ~~~~~~Dy~giDVkGKIVlv~~g~P~~~~~~~~~~~~~~~~~~~~~~K~~~A~~~GA~aVIv~~d~~~~~~~~~~~~~~~ 113 (151)
T cd04822 34 PELGYDDYAGLDVKGKIVLVLRHEPQEDDANSRFNGPGLTRHAGLRYKATNARRHGAAAVIVVNGPNSHSGDADRLPRFG 113 (151)
T ss_pred cccchhhccCCCCCCeEEEEEcCCcccccccccccccccccccCHHHHHHHHHHCCCeEEEEEeCCcccCcccccccccC
Confidence 347766777789999999999874 8889999999999999999999865321 1111101
Q ss_pred cccEEEEcHHHHHHHHHHHHc
Q 009592 468 YLPATAVLYDDAIKIHEYIKS 488 (531)
Q Consensus 468 ~iP~~~Is~~dG~~L~~~i~~ 488 (531)
.-.+++|+....+.|+..+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~ 134 (151)
T cd04822 114 GTAPQRVDIAAADPWFTAAEA 134 (151)
T ss_pred ccceEEechHHHHHHhhhhhh
Confidence 112788888888888886443
No 69
>cd02121 PA_GCPII_like PA_GCPII_like: Protease-associated domain containing protein, glutamate carboxypeptidase II (GCPII)-like. This group contains various PA domain-containing proteins similar to GCPII including, GCPIII (NAALADase2) and NAALADase L. These proteins belong to the peptidase M28 family. GCPII is also known N-acetylated-alpha-linked acidic dipeptidase (NAALDase1), folate hydrolase or prostate-specific membrane antigen (PSMA). GCPII is found in various human tissues including prostate, small intestine, and the central nervous system. In the brain, GCPII is known as NAALDase1, it functions as a NAALDase hydrolyzing the neuropeptide N-acetyl-L-aspartyl-L-glutamate (alpha-NAAG), to release free glutamate. In the small intestine, GCPII releases the terminal glutamate from poly-gamma-glutamated folates. GCPII (PSMA) is a useful cancer marker; its expression is markedly increased in prostate cancer and in tumor-associated neovasculature. GCPIII hydrolyzes alpha-NAAG with a lower
Probab=98.11 E-value=3.7e-06 Score=80.00 Aligned_cols=72 Identities=28% Similarity=0.357 Sum_probs=57.6
Q ss_pred CCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCC---------------------C-----c---c-cc---
Q 009592 418 PEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANG---------------------N-----E---Y-SY--- 464 (531)
Q Consensus 418 ~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~---------------------~-----~---~-~~--- 464 (531)
.-+++|||||+++|.|.+.+|+++|+++||+|||||++.... . . . ..
T Consensus 67 gvdv~GKIvLvr~G~~~~~~Kv~~A~~~GA~gVIiy~Dp~d~~~~~~~~~~~yP~g~~~~~~~vqRgsv~~~~~~~GDpl 146 (220)
T cd02121 67 GIDVKGKIVIARYGGIFRGLKVKNAQLAGAVGVIIYSDPADDGYITGENGKTYPDGPARPPSGVQRGSVLFMSIGPGDPL 146 (220)
T ss_pred CCCCCCeEEEEECCCccHHHHHHHHHHcCCEEEEEEeCchhcccccccccccCCCCCCCCCCcceecceeccccCCCCCC
Confidence 568999999999999999999999999999999999974211 0 0 0 00
Q ss_pred ----------------C---CCcccEEEEcHHHHHHHHHHHHcC
Q 009592 465 ----------------D---AHYLPATAVLYDDAIKIHEYIKST 489 (531)
Q Consensus 465 ----------------~---~~~iP~~~Is~~dG~~L~~~i~~~ 489 (531)
. -..||++-||+.|++.|++.++..
T Consensus 147 TPG~ps~~~~~r~~~~~~~~lP~IPs~PIS~~da~~lL~~L~g~ 190 (220)
T cd02121 147 TPGYPSKPGAERRDKEESKGLPKIPSLPISYRDAQPLLKALGGP 190 (220)
T ss_pred CCCCCCCCCCcccCcccccCCCCCCcccCCHHHHHHHHHHcCCC
Confidence 0 035899999999999999998754
No 70
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.07 E-value=8.4e-06 Score=81.76 Aligned_cols=81 Identities=19% Similarity=0.117 Sum_probs=63.9
Q ss_pred CCCCCCC---CCCCcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCCCccc----cCCCcccEEEEcHHHHHH
Q 009592 409 NQCLPGS---LTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYS----YDAHYLPATAVLYDDAIK 481 (531)
Q Consensus 409 ~~c~~~~---~~~~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~~~~~----~~~~~iP~~~Is~~dG~~ 481 (531)
.+|.+.. .....-...++|++||+|+|.+|+.+|+++|.+++|+|||........ .....+++++++...|+.
T Consensus 63 ~aC~~i~~~p~~~~~~~~~laLI~Rg~CsFe~Kv~~AQ~aGfkaaIVynn~~~~~lv~~~~~~~~v~i~~~~vs~~~ge~ 142 (348)
T KOG4628|consen 63 NACNPITNFPEHSTRSTSFLALIRRGGCSFEDKVLNAQRAGFKAAIVYNNVGSEDLVAMASNPSKVDIHIVFVSVFSGEL 142 (348)
T ss_pred cccCccccCccCCCCCcceEEEEEccCCchHHHHhhcccccCceEEEecCCCCchheeeccCCccceeEEEEEeeehHHH
Confidence 4576532 224456778999999999999999999999999999999866443222 234789999999999999
Q ss_pred HHHHHHcC
Q 009592 482 IHEYIKST 489 (531)
Q Consensus 482 L~~~i~~~ 489 (531)
|.+|....
T Consensus 143 l~~~~~~~ 150 (348)
T KOG4628|consen 143 LSSYAGRT 150 (348)
T ss_pred HHHhhccc
Confidence 99986554
No 71
>cd04820 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 1. A subgroup of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subgroups; relatively litt
Probab=98.04 E-value=5.8e-06 Score=72.68 Aligned_cols=49 Identities=27% Similarity=0.346 Sum_probs=42.9
Q ss_pred CCCCCCCCCCCcccceEEEEeeCCCc------------cchhhhHHHhcCceEEEEecCCC
Q 009592 409 NQCLPGSLTPEKVKGKIVLCMRGSGF------------KLSKGMEVKRAGGVGLILGNSPA 457 (531)
Q Consensus 409 ~~c~~~~~~~~~~~gkIvLi~rG~c~------------~~~K~~na~~aGA~gVIiynn~~ 457 (531)
..|...++...|++|||||+++|.|. +..|.++|.++||++||+|++..
T Consensus 36 ~~~~~~Dy~~iDVkGKIVlv~~g~p~~~~~~~~~~~~~~~~K~~~A~~~GA~aVIi~~d~~ 96 (137)
T cd04820 36 PELGHDDYAGLDVKGKIVVVLSGGPAGIPSEEGAHAHSSNEKARYAAKAGAIGMITLTTPR 96 (137)
T ss_pred cCcCHhhccCCCCCCeEEEEEcCCCCccccccccccccHHHHHHHHHHCCCeEEEEEeCCc
Confidence 35777777788999999999999984 66899999999999999999855
No 72
>cd02131 PA_hNAALADL2_like PA_hNAALADL2_like: Protease-associated domain containing proteins like human N-acetylated alpha-linked acidic dipeptidase-like 2 protein (hNAALADL2). This group contains various PA domain-containing proteins similar to hNAALADL2. The function of hNAALADL2 is unknown. This gene has been mapped to a chromosomal region associated with Cornelia de Lange syndrome. The significance of the PA domain to hNAALADL2 has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate.
Probab=98.04 E-value=1e-05 Score=71.48 Aligned_cols=68 Identities=21% Similarity=0.052 Sum_probs=54.4
Q ss_pred CcccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCCCC-------------------Ccccc-----------C---
Q 009592 419 EKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANG-------------------NEYSY-----------D--- 465 (531)
Q Consensus 419 ~~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~~~-------------------~~~~~-----------~--- 465 (531)
-+++|||+|++.|...+..|+++|+++||+|||||.+.... ..+.+ .
T Consensus 37 V~v~GkIvi~RyG~~~RG~Kv~~A~~~GA~GviIYsDP~d~~~~~~~~~~v~~v~~~~~GDP~TPG~PS~~~~~R~~~~~ 116 (153)
T cd02131 37 MNVTNQIALLKLGQAPLLYKLSLLEEAGFGGVLLYVDPCDLPKTRHTWHQAFMVSLNPGGDPSTPGYPSADQSCRQCRGN 116 (153)
T ss_pred CCccceEEEEeccCcchHHHHHHHHHCCCeEEEEecChhhccCcCCCccceEEEecCCCCCCCCCCCccccCcccCCcCC
Confidence 57999999999999999999999999999999999985211 10100 0
Q ss_pred CCcccEEEEcHHHHHHHHHHH
Q 009592 466 AHYLPATAVLYDDAIKIHEYI 486 (531)
Q Consensus 466 ~~~iP~~~Is~~dG~~L~~~i 486 (531)
-..||+.-||..|++.|++.-
T Consensus 117 lP~IPs~PIS~~dA~~lL~~~ 137 (153)
T cd02131 117 LTSLLVQPISAYLAKKLLSAP 137 (153)
T ss_pred CCCCcccccCHHHHHHHHhCC
Confidence 146899999999999998853
No 73
>KOG3525 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones]
Probab=97.53 E-value=0.00023 Score=74.96 Aligned_cols=180 Identities=16% Similarity=0.102 Sum_probs=109.3
Q ss_pred cchhhhcccCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccccccccCCCC
Q 009592 131 MGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLN 210 (531)
Q Consensus 131 ~~~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~~~~~~~~~~ 210 (531)
.+..+|..+++|+++.|++.|+|++..||++.... -..+..++....+.
T Consensus 21 ~v~~~~~~~~~g~~~~~~i~ddgl~~~h~~~~~~~-------------------------~~~~s~d~~~~~~~------ 69 (431)
T KOG3525|consen 21 NVQNAWCKGYTGTRVSVTILDDGLECSHPDLRNNY-------------------------DPLGSYDVNRHDND------ 69 (431)
T ss_pred eeeeccccCCCCCceEEEEeeccccccCccccccc-------------------------CcceeEeeecCCCC------
Confidence 55789999999999999999999999999986321 11122222221110
Q ss_pred CCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCceeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHH
Q 009592 211 ATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAID 290 (531)
Q Consensus 211 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~gg~~~g~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~ 290 (531)
.....+......|||-|++-++.... ..--..|+++++++..+|++...- ++...+..
T Consensus 70 -p~~~~~~~~~~~~g~~Ca~~~a~~~~---------~~~C~vg~~~~~~~~g~~~l~~~v------------~~~~~~~~ 127 (431)
T KOG3525|consen 70 -PEPRCDGTNENKHGTRCAGCVAARAN---------NLTCGVGVAYNATIGGIRMLAGCV------------SDAVEAPS 127 (431)
T ss_pred -cccccCCCCccccCCCCCcccccccC---------CCcCCCCcccCccccceeeeeeec------------ccceeccc
Confidence 01111223457899999999998731 112236999999999999986431 12222222
Q ss_pred HHHH-cCCcEEEEeccCCCCCCCccc---HHHHHHHH-----HHhCCcEEEEecCCCCCCCCCCC----CCCCceeeeec
Q 009592 291 DAIR-DGVHVLSISIGTNQPFAFNRD---GIAIGALN-----AVKHNILVACSAGNSGPAPSSLS----NLAPWLITVGA 357 (531)
Q Consensus 291 ~a~~-~g~~VIn~S~G~~~~~~~~~~---~~~~a~~~-----a~~~Gi~vV~AAGN~g~~~~~~~----~~~~~vitVgA 357 (531)
.... .-+++-+.|||.......... ....+... ...+|-+.|+|.||.|....... ....+.++.+.
T Consensus 128 ~~~~~~~~di~scsw~pddd~~t~~~~~~l~~~~~~~~~~~g~~~~gs~~v~as~ngg~~~d~c~c~~y~~~i~t~~~~~ 207 (431)
T KOG3525|consen 128 LGFGPCHIDIYSCSWGPDDDGKTCDGPGTLAREALVYGRGCGRHGKGSIFVWASGNGGTCGDSCHCDGYTNSIYTLSISC 207 (431)
T ss_pred ccCCCCCceeecCcCCcccCCCcCCCCcchhhhhhhccccccccCCCCeeEEEecCccccccccccccccCcceeccccc
Confidence 2222 246888999998543322222 22223333 23578899999999997654433 13445555666
Q ss_pred cccCCC
Q 009592 358 GSLDRD 363 (531)
Q Consensus 358 ~~~~~~ 363 (531)
.+....
T Consensus 208 ~~~~~~ 213 (431)
T KOG3525|consen 208 ATQCGK 213 (431)
T ss_pred ccccCC
Confidence 555444
No 74
>COG4934 Predicted protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.30 E-value=0.011 Score=68.00 Aligned_cols=95 Identities=19% Similarity=0.214 Sum_probs=58.6
Q ss_pred eeeccCCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCC-cEEEEeccCCCC--CCC--cccHHHHHHHHHH
Q 009592 251 ASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGV-HVLSISIGTNQP--FAF--NRDGIAIGALNAV 325 (531)
Q Consensus 251 ~~GvAP~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~-~VIn~S~G~~~~--~~~--~~~~~~~a~~~a~ 325 (531)
..-+||+|+|..+-. . ......+..|+..-...=. -+|-.||+.... ... .-+.+..-...|.
T Consensus 288 s~A~AP~A~I~lvva--p----------~~~~~a~dna~n~~~~~~~s~~ip~S~s~~~~~~~~~~~~~~~~d~l~~qas 355 (1174)
T COG4934 288 SHAMAPKANIDLVVA--P----------NPLVSALDNAYNEVLYYMVSFVIPISWSYAEFQGPISPGYADLMDLLYEQAS 355 (1174)
T ss_pred hhccCccCceEEEEc--C----------CCceehhhHHHHHHHHhhhcccccchhHHHHhccCCChHHHHHHHHHHHHhh
Confidence 357899999998766 2 2223333333333222211 334457765211 111 3344555667888
Q ss_pred hCCcEEEEecCCCCCCCCC--------CCCCCCceeeeec
Q 009592 326 KHNILVACSAGNSGPAPSS--------LSNLAPWLITVGA 357 (531)
Q Consensus 326 ~~Gi~vV~AAGN~g~~~~~--------~~~~~~~vitVgA 357 (531)
.+||.+++|+|.+|....+ .++.+|.|.+||-
T Consensus 356 aeGITi~AASGD~Gay~~~~~~~~sv~~PasSPYVtsVGG 395 (1174)
T COG4934 356 AEGITIFAASGDSGAYDDTPTPYLSVNFPASSPYVTSVGG 395 (1174)
T ss_pred ccceEEEEecccccccCCCcccceeecccCCCccEEeecC
Confidence 9999999999999876543 3346899999998
No 75
>cd04821 PA_M28_1_2 PA_M28_1_2: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 2. A subgroup of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subgroups; relatively litt
Probab=96.05 E-value=0.013 Score=53.06 Aligned_cols=71 Identities=20% Similarity=0.174 Sum_probs=49.1
Q ss_pred CCCCCcccceEEEEeeCCCccc-------------------hhhhHHHhcCceEEEEecCCCCCC---c-c---------
Q 009592 415 SLTPEKVKGKIVLCMRGSGFKL-------------------SKGMEVKRAGGVGLILGNSPANGN---E-Y--------- 462 (531)
Q Consensus 415 ~~~~~~~~gkIvLi~rG~c~~~-------------------~K~~na~~aGA~gVIiynn~~~~~---~-~--------- 462 (531)
++..-|++|||||+.++.-.+. .|.+.|+++||+|||+.++..... . +
T Consensus 42 Dy~g~DVkGKiVvvl~~~P~~~~~~~~~f~~~~~~~~~~~~~K~~~A~~~GA~gvi~v~~~~~~~~~~~~~~~~~~~~~~ 121 (157)
T cd04821 42 DYKGLDVKGKTVVILVNDPGFATPDSGLFNGKAMTYYGRWTYKYEEAARQGAAGALIVHETEPASYGWSVVQSSWTGEQF 121 (157)
T ss_pred cccCCCcCCcEEEEEcCCCCcccccccccCcccccccccHHHHHHHHHHCCCeEEEEEeCCCcccCChhhhccccCCCce
Confidence 5567799999999998765433 399999999999999997754211 0 0
Q ss_pred --c-cC--CCccc-EEEEcHHHHHHHHHH
Q 009592 463 --S-YD--AHYLP-ATAVLYDDAIKIHEY 485 (531)
Q Consensus 463 --~-~~--~~~iP-~~~Is~~dG~~L~~~ 485 (531)
. .. ...++ ..+|+.+.+++|++.
T Consensus 122 ~~~~~~~~~~~~~~~~~is~~~A~~lf~~ 150 (157)
T cd04821 122 DLVRANPGAPRVKVEGWIQRDAAVKLFAL 150 (157)
T ss_pred EeecccccCCCceEEEEECHHHHHHHHHh
Confidence 0 00 11222 467888888888774
No 76
>cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=88.55 E-value=0.24 Score=50.27 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=19.6
Q ss_pred CCccccccCCCCCCCCCCCcCCCC
Q 009592 508 APFMANFTSRGPNALDPYILKVSF 531 (531)
Q Consensus 508 ~~~~s~FSS~GP~~~~~~~lKPdi 531 (531)
.+.++.||||||+. ++++||||
T Consensus 218 ~~~~~~fSs~Gp~~--~g~~kPdv 239 (311)
T cd07497 218 SGDVVSWSSRGPSI--AGDPKPDL 239 (311)
T ss_pred CCCccccccCCCCc--ccCCCCce
Confidence 56789999999997 78999997
No 77
>KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones]
Probab=86.10 E-value=0.52 Score=53.00 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=22.6
Q ss_pred cCCCCceEEEEeecccCCCCCCCc
Q 009592 139 ARYGQDVIVGLVDNGVWPESKSFS 162 (531)
Q Consensus 139 ~~~G~gv~VaViDtGid~~Hp~f~ 162 (531)
.|.|+||+|||+|||||+.-|-++
T Consensus 77 eYDGRgV~IaIlDtGvDP~apGl~ 100 (1304)
T KOG1114|consen 77 EYDGRGVTIAILDTGVDPSAPGLQ 100 (1304)
T ss_pred CCCCCceEEEEeecCCCCCCCCce
Confidence 799999999999999999999885
No 78
>PF08260 Kinin: Insect kinin peptide; InterPro: IPR013202 This entry represents neuropeptides that are the first members of the insect kinin-family isolated from the American cockroach. Their occurrence in the retrocerebral complex suggests a physiological role as a neurohormone. The C-terminal sequence Phe-X-Ser-Trp-Gly-NH2 characterised the peptides as members of the insect kinin family. Data suggest a possible involvement of insect kinins in water-balance by regulating the osmoregulation. Insect kinins also mediate visceral muscle contractile activity (myotropic activity) []. These peptides have lengths ranging from 6 to 14 amino acids [].
Probab=86.06 E-value=0.32 Score=20.87 Aligned_cols=6 Identities=50% Similarity=0.800 Sum_probs=5.1
Q ss_pred cccCCC
Q 009592 513 NFTSRG 518 (531)
Q Consensus 513 ~FSS~G 518 (531)
.|+|||
T Consensus 3 afnswg 8 (8)
T PF08260_consen 3 AFNSWG 8 (8)
T ss_pred cccccC
Confidence 589998
No 79
>cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins. GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure
Probab=80.01 E-value=0.93 Score=48.63 Aligned_cols=23 Identities=26% Similarity=0.342 Sum_probs=19.9
Q ss_pred CCCccccccCCCCCCCCCCCcCCCC
Q 009592 507 PAPFMANFTSRGPNALDPYILKVSF 531 (531)
Q Consensus 507 ~~~~~s~FSS~GP~~~~~~~lKPdi 531 (531)
..+.++.||||||+. ++++||||
T Consensus 355 ~~~~~~~~Ss~G~~~--~~~~kpdi 377 (455)
T cd07478 355 NNNSIAIFSGRGPTR--DGRIKPDI 377 (455)
T ss_pred CCCcccCccCCCcCC--CCCcCceE
Confidence 345799999999998 78999996
No 80
>cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II. Tripeptidyl aminopeptidases II are member of the peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Tripeptidyl aminopeptidase II removes tripeptides from the free N terminus of oligopeptides as well as having endoproteolytic activity. Some tripeptidyl aminopeptidases have been shown to cleave tripeptides and small peptides, e.g. angiotensin II and glucagon, while others are believed to be involved in MHC I processing.
Probab=74.18 E-value=1.5 Score=46.13 Aligned_cols=48 Identities=23% Similarity=0.268 Sum_probs=35.9
Q ss_pred hhhhcc--cCCCCceEEEEeecccCCCCCCCcCCCCCCCCCCccccccccCCcCcccCCceeeeEEecccc
Q 009592 133 QDLLSK--ARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKG 201 (531)
Q Consensus 133 ~~~~~~--~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ki~~~~~~~~~ 201 (531)
..+|.. .+.|+||+|||+|||||+.||.|+-.. .-.+||+...+.+..
T Consensus 11 ~~f~~~~p~~dgr~v~iai~dtgvd~~~~~lq~t~---------------------~g~~ki~d~~d~t~~ 60 (412)
T cd04857 11 LRFLQKYPEYDGRGVLIAILDTGVDPGAPGLQVTT---------------------DGKPKIIDIIDCTGS 60 (412)
T ss_pred HHHHHHCcCCCCCCcEEEEecCCCCCCCCcccccC---------------------CCCCeEEEEEeCCCC
Confidence 444443 799999999999999999999997221 123688888777653
No 81
>cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=67.44 E-value=2.7 Score=42.12 Aligned_cols=17 Identities=35% Similarity=0.462 Sum_probs=15.2
Q ss_pred cccCCCCCCCCCCCcCCCC
Q 009592 513 NFTSRGPNALDPYILKVSF 531 (531)
Q Consensus 513 ~FSS~GP~~~~~~~lKPdi 531 (531)
.||||||.. ++.+||||
T Consensus 200 ~fs~~Gp~~--~~~~KPDl 216 (291)
T cd04847 200 ATTSSGPGS--PGPIKPDV 216 (291)
T ss_pred CccccCCCC--CCCcCCcE
Confidence 499999997 78999996
No 82
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=64.17 E-value=6 Score=44.47 Aligned_cols=38 Identities=32% Similarity=0.446 Sum_probs=35.0
Q ss_pred cccceEEEEeeCCCccchhhhHHHhcCceEEEEecCCC
Q 009592 420 KVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPA 457 (531)
Q Consensus 420 ~~~gkIvLi~rG~c~~~~K~~na~~aGA~gVIiynn~~ 457 (531)
+++|||+|.+.+...+..|++|+.++||.|||+|.+..
T Consensus 182 ~~~g~i~l~r~~~i~~g~~~~na~~~~a~gviiy~d~~ 219 (702)
T KOG2195|consen 182 NLSGKIVLARVGKIYRGKKVKNAEAAGADGVIIYTDPY 219 (702)
T ss_pred cccCceEEEEccccchhhhHhhHHHhhcCcEEEeeccc
Confidence 47899999999999999999999999999999999743
No 83
>cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intr
Probab=63.79 E-value=4.2 Score=41.71 Aligned_cols=25 Identities=28% Similarity=0.375 Sum_probs=20.9
Q ss_pred CCCCCccccccCCCCCCCCCCCcCCCC
Q 009592 505 TQPAPFMANFTSRGPNALDPYILKVSF 531 (531)
Q Consensus 505 ~~~~~~~s~FSS~GP~~~~~~~lKPdi 531 (531)
....+.++.||||||+. ...+||||
T Consensus 228 ~~~~~~~~~~S~~G~~~--~~~~~pdi 252 (346)
T cd07475 228 NPNGGQMSGFSSWGPTP--DLDLKPDI 252 (346)
T ss_pred CCCCCccCCCcCCCCCc--ccCcCCeE
Confidence 34567899999999997 67899996
No 84
>cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=48.17 E-value=11 Score=36.85 Aligned_cols=22 Identities=36% Similarity=0.323 Sum_probs=18.6
Q ss_pred CCccccccCCCCCCCCCCCcCCCC
Q 009592 508 APFMANFTSRGPNALDPYILKVSF 531 (531)
Q Consensus 508 ~~~~s~FSS~GP~~~~~~~lKPdi 531 (531)
.+.++.||++||+. ++.+||||
T Consensus 183 ~~~~~~~S~~G~~~--~~~~~pdi 204 (261)
T cd07493 183 NGNKASFSSIGPTA--DGRLKPDV 204 (261)
T ss_pred CCCCCccCCcCCCC--CCCcCCce
Confidence 34789999999987 78899996
No 85
>cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases. Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases
Probab=46.12 E-value=11 Score=37.48 Aligned_cols=22 Identities=32% Similarity=0.465 Sum_probs=18.9
Q ss_pred CCccccccCCCCCCCCCCCcCCCC
Q 009592 508 APFMANFTSRGPNALDPYILKVSF 531 (531)
Q Consensus 508 ~~~~s~FSS~GP~~~~~~~lKPdi 531 (531)
...++.||++||+. .+++||||
T Consensus 198 ~~~~~~~S~~G~~~--~~~~~pdv 219 (293)
T cd04842 198 SDTVASFSSRGPTY--DGRIKPDL 219 (293)
T ss_pred CCccccccCcCCCC--CCCcCCCE
Confidence 45689999999997 68899996
No 86
>cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=43.59 E-value=12 Score=36.38 Aligned_cols=21 Identities=29% Similarity=0.392 Sum_probs=18.1
Q ss_pred CccccccCCCCCCCCCCCcCCCC
Q 009592 509 PFMANFTSRGPNALDPYILKVSF 531 (531)
Q Consensus 509 ~~~s~FSS~GP~~~~~~~lKPdi 531 (531)
..++.|||+||+. .+.+||||
T Consensus 178 ~~~~~~s~~G~~~--~~~~~~di 198 (264)
T cd07487 178 DGISYFSSRGPTG--DGRIKPDV 198 (264)
T ss_pred ccccccccCCCCC--CCCcCCCE
Confidence 3489999999997 68899996
No 87
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=43.24 E-value=16 Score=22.08 Aligned_cols=16 Identities=31% Similarity=0.397 Sum_probs=9.5
Q ss_pred chHHHHHHHHHHHhhh
Q 009592 2 TKIFIFFLFLLTLLAS 17 (531)
Q Consensus 2 ~~~~~~~l~~~~~~~~ 17 (531)
+|+++.++.++.+...
T Consensus 8 Kkil~~l~a~~~LagC 23 (25)
T PF08139_consen 8 KKILFPLLALFMLAGC 23 (25)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 6666666666655443
No 88
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=41.08 E-value=21 Score=29.40 Aligned_cols=12 Identities=33% Similarity=0.628 Sum_probs=5.2
Q ss_pred CchHHHHHHHHH
Q 009592 1 MTKIFIFFLFLL 12 (531)
Q Consensus 1 m~~~~~~~l~~~ 12 (531)
-.|.|+||.|+|
T Consensus 2 aSK~~llL~l~L 13 (95)
T PF07172_consen 2 ASKAFLLLGLLL 13 (95)
T ss_pred chhHHHHHHHHH
Confidence 034445554444
No 89
>KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=38.28 E-value=15 Score=39.98 Aligned_cols=25 Identities=24% Similarity=0.203 Sum_probs=19.4
Q ss_pred CCCccccccCCCCCC-C---CCCCcCCCC
Q 009592 507 PAPFMANFTSRGPNA-L---DPYILKVSF 531 (531)
Q Consensus 507 ~~~~~s~FSS~GP~~-~---~~~~lKPdi 531 (531)
..+.++.|||||-|. + --+++||||
T Consensus 354 fdD~IA~FSSRGMtTWELP~GYGRmkpDi 382 (1033)
T KOG4266|consen 354 FDDHIASFSSRGMTTWELPHGYGRMKPDI 382 (1033)
T ss_pred ccchhhhhccCCcceeecCCcccccCCce
Confidence 367899999999775 1 237899997
No 90
>PF02402 Lysis_col: Lysis protein; InterPro: IPR003059 The DNA sequence of the entire colicin E2 operon has been determined []. The operon comprises the colicin activity gene (ceaB), the colicin immunity gene (ceiB) and the lysis gene (celB), which is essential for colicin release from producing cells []. A putative LexA binding site is located upstream from ceaB, and a rho-independent terminator structure is located downstream from celB []. Comparison of the amino acid sequences of colicin E2 and cloacin DF13 reveal extensive similarity. These colicins have different modes of action and recognise different cell surface receptors; the two major regions of heterology at the C terminus, and in the C-terminal end of the central region are thought to correspond to the catalytic and receptor-recognition domains, respectively []. Sequence similarities between colicins E2, A and E1 [] are less striking. The colicin E2 (pyocin) immunity protein does not share similarity with either the colicin E3 or cloacin DF13 [] immunity proteins. By contrast, the lysis proteins of the ColE2, ColE1 and CloDF13 plasmids are almost identical except in the N-terminal regions, which themselves are similar to lipoprotein signal peptides []. Processing of the ColE2 prolysis protein to the mature form is prevented by globomycin, a specific inhibitor of the lipoprotein signal peptidase []. The mature ColE2 lysis protein is located in the cell envelope [].; GO: 0009405 pathogenesis, 0019835 cytolysis, 0019867 outer membrane
Probab=36.23 E-value=15 Score=25.31 Aligned_cols=21 Identities=43% Similarity=0.640 Sum_probs=13.7
Q ss_pred CchHHHHHHHHHHHhhhhhcc
Q 009592 1 MTKIFIFFLFLLTLLASSAQK 21 (531)
Q Consensus 1 m~~~~~~~l~~~~~~~~~~~~ 21 (531)
|+|+++++++++.++..+++.
T Consensus 1 MkKi~~~~i~~~~~~L~aCQa 21 (46)
T PF02402_consen 1 MKKIIFIGIFLLTMLLAACQA 21 (46)
T ss_pred CcEEEEeHHHHHHHHHHHhhh
Confidence 888877777776655555443
No 91
>cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins. Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity.
Probab=31.03 E-value=27 Score=34.26 Aligned_cols=22 Identities=32% Similarity=0.513 Sum_probs=18.5
Q ss_pred CCccccccCCCCCCCCCCCcCCCC
Q 009592 508 APFMANFTSRGPNALDPYILKVSF 531 (531)
Q Consensus 508 ~~~~s~FSS~GP~~~~~~~lKPdi 531 (531)
.+.++.||++||+. .+.+||||
T Consensus 184 ~~~~~~~S~~g~~~--~~~~~~dv 205 (264)
T cd07481 184 NDVLADFSSRGPST--YGRIKPDI 205 (264)
T ss_pred CCCCccccCCCCCC--CCCcCceE
Confidence 46789999999987 57899986
No 92
>COG5567 Predicted small periplasmic lipoprotein [Cell motility and secretion]
Probab=30.77 E-value=54 Score=23.84 Aligned_cols=25 Identities=28% Similarity=0.285 Sum_probs=19.4
Q ss_pred CchHHHHHHHHHHHhhhhhccCCce
Q 009592 1 MTKIFIFFLFLLTLLASSAQKQKQV 25 (531)
Q Consensus 1 m~~~~~~~l~~~~~~~~~~~~~~~~ 25 (531)
|++.|.-++++.++++.+.+..++.
T Consensus 1 mk~~~~s~~ala~l~sLA~CG~KGP 25 (58)
T COG5567 1 MKNVFKSLLALATLFSLAGCGLKGP 25 (58)
T ss_pred ChhHHHHHHHHHHHHHHHhcccCCC
Confidence 8888888888877778888876654
No 93
>cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins. SKI-1 (type I membrane-bound subtilisin-kexin-isoenzyme) proteins are secretory Ca2+-dependent serine proteinases cleave at nonbasic residues: Thr, Leu, and Lys. SKI-1s play a critical role in the regulation of the synthesis and metabolism of cholesterol and fatty acid metabolism. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme tem
Probab=29.56 E-value=29 Score=33.93 Aligned_cols=24 Identities=25% Similarity=0.178 Sum_probs=17.1
Q ss_pred CCccccccCCCCCC----CCCCCcCCCC
Q 009592 508 APFMANFTSRGPNA----LDPYILKVSF 531 (531)
Q Consensus 508 ~~~~s~FSS~GP~~----~~~~~lKPdi 531 (531)
.+.++.||||||+. ...+.+||||
T Consensus 163 ~~~~~~~S~~g~~~~~~p~~~g~~~~di 190 (255)
T cd07479 163 DDNIARFSSRGMTTWELPGGYGRVKPDI 190 (255)
T ss_pred CCccccccCCCCCcccccCCCCCcCccE
Confidence 45789999999652 1146678986
No 94
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila []. This entry includes DIMs 1 to 4 and DIM23.
Probab=28.34 E-value=91 Score=20.69 Aligned_cols=6 Identities=17% Similarity=0.124 Sum_probs=3.0
Q ss_pred CceEEE
Q 009592 23 KQVYIV 28 (531)
Q Consensus 23 ~~~yiV 28 (531)
++..||
T Consensus 23 pG~ViI 28 (36)
T PF08194_consen 23 PGNVII 28 (36)
T ss_pred CCeEEE
Confidence 555544
No 95
>TIGR02052 MerP mercuric transport protein periplasmic component. This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).
Probab=28.30 E-value=52 Score=25.35 Aligned_cols=20 Identities=10% Similarity=0.134 Sum_probs=14.7
Q ss_pred CchHHHHHHHHHHHhhhhhc
Q 009592 1 MTKIFIFFLFLLTLLASSAQ 20 (531)
Q Consensus 1 m~~~~~~~l~~~~~~~~~~~ 20 (531)
|++++.|++|++++....-+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (92)
T TIGR02052 1 MKKLATLLALFVLTSLPAWA 20 (92)
T ss_pred ChhHHHHHHHHHHhcchhhh
Confidence 88998888888766655433
No 96
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=27.97 E-value=1.1e+02 Score=27.39 Aligned_cols=26 Identities=27% Similarity=0.397 Sum_probs=18.1
Q ss_pred CchHHHHHHHHHHHhhhhhccCCceEE
Q 009592 1 MTKIFIFFLFLLTLLASSAQKQKQVYI 27 (531)
Q Consensus 1 m~~~~~~~l~~~~~~~~~~~~~~~~yi 27 (531)
|+|++++++|.+++..++. ...+.|.
T Consensus 1 Mrk~l~~~~l~l~LaGCAt-~~~gnf~ 26 (151)
T PRK13883 1 MRKIVLLALLALALGGCAT-SQYGNFV 26 (151)
T ss_pred ChhHHHHHHHHHHHhcccC-CCCCccc
Confidence 8999888888777766663 3445554
No 97
>PF03032 Brevenin: Brevenin/esculentin/gaegurin/rugosin family; InterPro: IPR004275 In addition to the highly specific cell-mediated immune system, vertebrates possess an efficient host-defence mechanism against invading microorganisms which involves the synthesis of highly potent antimicrobial peptides with a large spectrum of activity. This entry represents a number of these defence peptides secreted from the skin of amphibians, including the opiate-like dermorphins and deltorphins, and the antimicrobial dermoseptins and temporins.; GO: 0006952 defense response, 0042742 defense response to bacterium, 0005576 extracellular region
Probab=26.69 E-value=39 Score=23.79 Aligned_cols=19 Identities=26% Similarity=0.427 Sum_probs=9.3
Q ss_pred CchHHHHHHHHHHHhhhhh
Q 009592 1 MTKIFIFFLFLLTLLASSA 19 (531)
Q Consensus 1 m~~~~~~~l~~~~~~~~~~ 19 (531)
|+|.++|++++-++....+
T Consensus 3 lKKsllLlfflG~ISlSlC 21 (46)
T PF03032_consen 3 LKKSLLLLFFLGTISLSLC 21 (46)
T ss_pred chHHHHHHHHHHHcccchH
Confidence 5555555555444444444
No 98
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=25.41 E-value=1.3e+02 Score=30.35 Aligned_cols=52 Identities=17% Similarity=0.217 Sum_probs=36.0
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCCC-----------CCCcccHHHHHHHHHH-----hCCcEEEEecCC
Q 009592 285 MLAAIDDAIRDGVHVLSISIGTNQP-----------FAFNRDGIAIGALNAV-----KHNILVACSAGN 337 (531)
Q Consensus 285 i~~ai~~a~~~g~~VIn~S~G~~~~-----------~~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN 337 (531)
-+.-++||+++|.+||+ |-|.... +....||+++++++-. ..||.||+|+--
T Consensus 179 KVdLL~y~~~~~l~Vis-s~GaaaksDPTrv~v~Dis~t~~DPlsR~vRrrLrk~GI~~GIpVVFS~Ek 246 (430)
T KOG2018|consen 179 KVDLLEYCYNHGLKVIS-STGAAAKSDPTRVNVADISETEEDPLSRSVRRRLRKRGIEGGIPVVFSLEK 246 (430)
T ss_pred hhHHHHHHHHcCCceEe-ccCccccCCCceeehhhccccccCcHHHHHHHHHHHhccccCCceEEecCC
Confidence 45678899999999996 5554321 2345678887776543 348899998754
No 99
>PF08821 CGGC: CGGC domain; InterPro: IPR014925 Proteins in this entry are a quite highly conserved sequence of CGGC in its central region. The region has many conserved cysteines and histidines suggestive of a zinc binding function.
Probab=24.77 E-value=2.6e+02 Score=23.49 Aligned_cols=46 Identities=13% Similarity=0.131 Sum_probs=34.0
Q ss_pred eecc-CCCcEEEeeeecCCCccCccCCCCCCHHHHHHHHHHHHHcCCcEEEEeccCCC
Q 009592 252 SGGA-PLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISIGTNQ 308 (531)
Q Consensus 252 ~GvA-P~a~l~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn~S~G~~~ 308 (531)
.... ++++|+.+- .+. ++....++.-+++..+.|+++|-+|=....
T Consensus 31 ~~y~~~~~elvgf~--~Cg---------GCpg~~~~~~~~~l~~~~~d~IHlssC~~~ 77 (107)
T PF08821_consen 31 ARYDDEDVELVGFF--TCG---------GCPGRKLVRRIKKLKKNGADVIHLSSCMVK 77 (107)
T ss_pred ccCCCCCeEEEEEe--eCC---------CCChhHHHHHHHHHHHCCCCEEEEcCCEec
Confidence 3443 467887753 343 577888899999999999999999877643
No 100
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=23.58 E-value=48 Score=18.30 Aligned_cols=9 Identities=33% Similarity=0.689 Sum_probs=4.4
Q ss_pred CchHHHHHH
Q 009592 1 MTKIFIFFL 9 (531)
Q Consensus 1 m~~~~~~~l 9 (531)
|+|+++.++
T Consensus 1 MMk~vIIlv 9 (19)
T PF13956_consen 1 MMKLVIILV 9 (19)
T ss_pred CceehHHHH
Confidence 555544433
No 101
>cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5. gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=21.14 E-value=50 Score=33.24 Aligned_cols=18 Identities=33% Similarity=0.519 Sum_probs=15.4
Q ss_pred ccccCCCCCCCCCCCcCCCC
Q 009592 512 ANFTSRGPNALDPYILKVSF 531 (531)
Q Consensus 512 s~FSS~GP~~~~~~~lKPdi 531 (531)
+.||+|||+. ....||||
T Consensus 189 ~~~s~~g~~~--~~~~kpdv 206 (312)
T cd07489 189 SYFSSWGPTN--ELYLKPDV 206 (312)
T ss_pred CCccCCCCCC--CCCcCccE
Confidence 7899999997 57789986
No 102
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=20.86 E-value=2.3e+02 Score=29.33 Aligned_cols=64 Identities=16% Similarity=0.184 Sum_probs=44.6
Q ss_pred CcccceEEEEeeCCCccchh--hhHHHhcCceEEEEecCCCC-----CC---ccccCCCcccEEEEcHHHHHHH
Q 009592 419 EKVKGKIVLCMRGSGFKLSK--GMEVKRAGGVGLILGNSPAN-----GN---EYSYDAHYLPATAVLYDDAIKI 482 (531)
Q Consensus 419 ~~~~gkIvLi~rG~c~~~~K--~~na~~aGA~gVIiynn~~~-----~~---~~~~~~~~iP~~~Is~~dG~~L 482 (531)
.|..|++++-++-..-..-| +-.|.++||-++||-...+. ++ .....|..||++.+...++..+
T Consensus 86 gD~~Gr~~Va~~pq~vdd~k~~~i~Aae~ga~a~~f~~~~~rriV~~Gd~gy~~~s~PtPIPva~v~en~~~y~ 159 (486)
T COG4882 86 GDAGGRVVVARAPQVVDDLKAAAILAAEAGAEALLFESRDPRRIVTGGDWGYSVSSSPTPIPVAVVPENYSRYA 159 (486)
T ss_pred CCCCCeEEeeeccccHHHHHHHHHHHHHcCCeEEEEecCCceeEEecccccccCCCCCCCcceEEeccCcchhh
Confidence 37889999888844322222 34799999999999887542 22 2334678999999987777643
Done!