Query 009593
Match_columns 531
No_of_seqs 382 out of 1742
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 08:39:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009593.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009593hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 7.4E-58 2.5E-62 479.9 26.0 327 97-450 16-398 (413)
2 2x0b_A Renin; hydrolase-hormon 100.0 1.3E-57 4.4E-62 473.2 25.7 310 91-451 51-383 (383)
3 1tzs_A Cathepsin E; hydrolase, 100.0 3.9E-57 1.3E-61 466.0 28.9 317 89-455 11-346 (351)
4 3psg_A Pepsinogen; hydrolase(a 100.0 4.6E-57 1.6E-61 468.0 27.6 309 90-451 45-370 (370)
5 1mpp_A Pepsin; hydrolase(acid 100.0 2.7E-56 9.4E-61 461.5 28.1 316 91-456 8-360 (361)
6 1dpj_A Proteinase A; proteinas 100.0 6.4E-56 2.2E-60 453.0 29.0 307 91-451 3-329 (329)
7 1am5_A Pepsin, acid proteinase 100.0 4.1E-56 1.4E-60 453.4 27.4 306 92-451 3-324 (324)
8 1j71_A Candidapepsin, aspartic 100.0 1E-55 3.5E-60 452.4 29.2 310 92-454 4-327 (334)
9 3cms_A Chymosin B; hydrolase, 100.0 7.7E-56 2.6E-60 451.2 27.7 308 91-451 4-323 (323)
10 2qzx_A Candidapepsin-5; aspart 100.0 8.3E-56 2.9E-60 454.5 27.4 323 92-463 4-341 (342)
11 3aup_A SBG7S, BG, basic 7S glo 100.0 7.4E-56 2.5E-60 464.6 27.4 337 92-458 11-400 (403)
12 2apr_A Rhizopuspepsin; hydrola 100.0 2.9E-55 9.8E-60 447.3 30.3 300 97-451 11-324 (325)
13 4aa9_A Chymosin; hydrolase, as 100.0 1.1E-55 3.9E-60 449.4 26.9 307 92-451 2-320 (320)
14 2bju_A Plasmepsin II; aspartic 100.0 2E-55 6.8E-60 464.3 27.6 309 90-451 127-450 (453)
15 1htr_B Gastricsin; aspartyl pr 100.0 2.3E-55 7.7E-60 448.9 26.8 305 93-451 5-329 (329)
16 3k1w_A Renin; protease, altern 100.0 1.7E-55 5.8E-60 452.1 24.9 313 89-451 6-340 (341)
17 3fv3_A SAPP1P-secreted asparti 100.0 6.1E-55 2.1E-59 447.6 29.0 312 92-463 4-339 (339)
18 3c9x_A Trichoderma reesei aspa 100.0 2.5E-55 8.7E-60 448.5 25.8 306 97-450 11-329 (329)
19 1miq_A Plasmepsin; aspartic pr 100.0 1.2E-54 4.1E-59 450.6 29.3 307 90-451 51-374 (375)
20 1oew_A Endothiapepsin; hydrola 100.0 6.3E-55 2.1E-59 445.5 25.3 303 98-450 12-329 (329)
21 3pvk_A Candidapepsin-2; hydrol 100.0 1.6E-54 5.6E-59 444.9 28.1 320 92-463 4-341 (342)
22 1qdm_A Prophytepsin; aspartic 100.0 2.4E-54 8.1E-59 460.6 30.0 322 90-450 41-477 (478)
23 2ewy_A Beta-secretase 2; BACE2 100.0 1.7E-54 5.8E-59 451.6 27.0 329 94-464 6-368 (383)
24 2qp8_A Beta-secretase 1; BACE1 100.0 5.8E-54 2E-58 449.3 29.7 324 97-463 17-379 (395)
25 3qvc_A Histo-aspartic protease 100.0 1.9E-53 6.6E-58 449.7 28.3 308 89-451 125-449 (451)
26 3vf3_A Beta-secretase 1; struc 100.0 3.1E-53 1.1E-57 444.8 29.0 325 98-464 25-387 (402)
27 1yg9_A Aspartic protease BLA G 100.0 1.8E-53 6.1E-58 434.9 25.8 307 92-451 8-329 (330)
28 3lpj_A Beta-secretase 1; alzhe 100.0 9.7E-53 3.3E-57 447.6 29.1 327 97-464 70-433 (455)
29 1ibq_A Aspergillopepsin; aspar 100.0 9.1E-53 3.1E-57 428.8 26.2 300 99-450 12-324 (325)
30 1t6e_X Xylanase inhibitor; two 100.0 1.6E-52 5.5E-57 436.1 26.9 321 93-452 5-374 (381)
31 1izd_A Aspartic proteinase; su 100.0 5E-52 1.7E-56 422.9 25.5 297 99-450 13-322 (323)
32 1bxo_A Protein (penicillopepsi 100.0 1.7E-52 5.9E-57 426.4 20.7 297 99-450 13-322 (323)
33 1wkr_A Polyporopepsin; hydrola 100.0 1.7E-51 6E-56 422.1 26.4 298 92-455 4-337 (340)
34 1b5f_A Protein (cardosin A); h 100.0 1.3E-42 4.5E-47 338.2 19.4 226 89-352 1-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 8.5E-37 2.9E-41 297.7 21.9 220 220-451 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.4E-22 4.9E-27 167.8 9.2 92 91-211 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.6 9E-17 3.1E-21 130.4 5.5 80 371-451 3-87 (87)
38 3s8i_A Protein DDI1 homolog 1; 94.8 0.039 1.3E-06 48.3 5.8 109 305-451 23-136 (148)
39 2i1a_A DNA damage-inducible pr 94.0 0.17 5.9E-06 44.0 8.2 26 423-448 109-134 (148)
40 1fmb_A EIAV protease; hydrolas 82.0 1.4 4.7E-05 35.9 4.2 27 103-131 9-35 (104)
41 2hs1_A HIV-1 protease; ultra-h 81.9 1.4 4.8E-05 35.4 4.1 26 104-131 10-35 (99)
42 3ec0_A Protease; HIV-2, inhibi 77.7 2.2 7.6E-05 34.2 4.1 26 104-131 10-35 (99)
43 3liy_A Protease; hydrolase, hy 73.7 3.2 0.00011 34.0 4.0 28 104-131 12-42 (116)
44 2hah_A Protease, retropepsin; 72.4 3.4 0.00012 34.2 4.0 26 103-131 15-40 (116)
45 2i1a_A DNA damage-inducible pr 70.3 3.9 0.00013 35.0 4.2 30 100-131 24-53 (148)
46 3sqf_A Protease; folded monome 65.5 6.5 0.00022 32.3 4.2 26 104-131 11-36 (114)
47 3s8i_A Protein DDI1 homolog 1; 62.6 6.6 0.00023 33.9 4.0 30 101-132 23-52 (148)
48 3slz_A GAG-Pro-POL polyprotein 51.7 14 0.00047 31.2 4.1 27 103-131 23-49 (132)
49 2rsp_A RSV protease; hydrolase 47.7 15 0.00051 30.6 3.6 21 109-131 27-47 (124)
50 1lya_A Cathepsin D; lysosomal 44.4 39 0.0013 26.5 5.5 32 305-342 13-44 (97)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 44.3 19 0.00066 32.7 4.1 26 104-131 10-35 (203)
52 1ibq_A Aspergillopepsin; aspar 36.8 31 0.0011 33.5 4.7 42 293-343 3-44 (325)
53 1bxo_A Protein (penicillopepsi 36.3 30 0.001 33.6 4.4 42 293-343 4-45 (323)
54 1izd_A Aspartic proteinase; su 35.5 34 0.0012 33.2 4.7 42 293-343 4-45 (323)
55 3ka2_A [L-Ala51;Gly51']HIV-1 p 28.1 51 0.0017 29.9 4.1 27 103-131 113-139 (203)
56 3c9x_A Trichoderma reesei aspa 27.4 76 0.0026 30.7 5.7 43 294-343 4-47 (329)
57 1oew_A Endothiapepsin; hydrola 26.0 84 0.0029 30.4 5.7 43 294-343 4-47 (329)
58 2apr_A Rhizopuspepsin; hydrola 25.5 82 0.0028 30.4 5.5 42 294-342 5-46 (325)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=7.4e-58 Score=479.90 Aligned_cols=327 Identities=22% Similarity=0.372 Sum_probs=260.4
Q ss_pred CCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCCCCC-
Q 009593 97 NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLG- 175 (531)
Q Consensus 97 ~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~- 175 (531)
+..+.+||++|.||||||+|.|++||||+++||+|. .| .+|+||+.++|.+..|...
T Consensus 16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~--~c--------------------~~Sst~~~v~C~s~~C~~~~ 73 (413)
T 3vla_A 16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD--QN--------------------YVSSTYRPVRCRTSQCSLSG 73 (413)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--SS--------------------CCCTTCEECBTTSHHHHHTT
T ss_pred cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC--CC--------------------CCCCCcCccCCCcccccccc
Confidence 344678999999999999999999999999999993 33 2599999999999999753
Q ss_pred -CCC---CC------CCCCCceEEecC-CCCceeeEEEEEEEEEEecCCCCcc-ccccccceEEEEEEeccCCCCCCCCC
Q 009593 176 -TSC---QN------PKQPCPYTMDYY-TENTSSSGLLVEDILHLISGGDNAL-KNSVQASVIIGCGMKQSGGYLDGVAP 243 (531)
Q Consensus 176 -~~C---~~------~~~~c~~~i~Y~-~g~s~~~G~~~~D~v~lg~~~~~~~-~~~~~~~~~fG~~~~~~g~~~~~~~~ 243 (531)
..| .+ .++.|.|.+.|+ ++ +.+.|++++|+|+|+..++... ....+.++.|||++++.+... ...+
T Consensus 74 ~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~-~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~-~~~~ 151 (413)
T 3vla_A 74 SIACGDCFNGPRPGCNNNTCGVFPENPVIN-TATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL-ASGV 151 (413)
T ss_dssp CCEEECCSSCCBTTBCSSEEEECCEETTTT-EECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS-CTTC
T ss_pred cCCCcccccCCCCCCCCCcCcceeecCcCC-ceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc-cccc
Confidence 122 21 124699999994 75 6899999999999986433210 013567899999998743221 2367
Q ss_pred CeeeecCCCCCChHHHHHhcCCCCCcEEEeeecC--CCCcEEECCCCCCC----------CeeeeeeecCCC--------
Q 009593 244 DGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKD--DSGRIFFGDQGPAT----------QQSTSFLASNGK-------- 303 (531)
Q Consensus 244 dGIlGLG~~~~S~~~~L~~~g~i~~~FS~~L~~~--~~G~l~fGg~d~~~----------~~~~~~v~~~~~-------- 303 (531)
|||||||++.+|++.||+++++++++|||||.+. .+|.|+||+.|... ..++|++..+..
T Consensus 152 dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~ 231 (413)
T 3vla_A 152 VGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQG 231 (413)
T ss_dssp CEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTT
T ss_pred ccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccccc
Confidence 9999999999999999999988899999999873 57999999998632 335555443211
Q ss_pred --ceeEEEEeeEEEeCCeEeecC----------cceEEEecCccceeccHHHHHHHHHHHHhhccC---cccccCCCCce
Q 009593 304 --YITYIIGVETCCIGSSCLKQT----------SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVND---TITSFEGYPWK 368 (531)
Q Consensus 304 --~~~y~V~l~~i~Vgg~~~~~~----------~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~---~~~~~~~~~~~ 368 (531)
..+|+|+|++|.||++.+... ..++||||||++++||+++|++|+++|.+++.. .+. .....++
T Consensus 232 ~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~-~~~~~~~ 310 (413)
T 3vla_A 232 EPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRV-ASVAPFG 310 (413)
T ss_dssp CCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEE-CCCTTCS
T ss_pred CCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcC-CCCCCCc
Confidence 269999999999999988632 367999999999999999999999999988742 222 1234578
Q ss_pred eeeecCCCC----CCCCCeEEEEecC-CcEEEEcCCeEEEEeccccceEEEEEEecCC---CceeeCccceeceEEEEeC
Q 009593 369 CCYKSSSQR----LPKLPSVKLMFPQ-NNSFVVNNPVFVIYGTQVVTGFCLAIQPVDG---DIGTIGQNFMTGYRVVFDR 440 (531)
Q Consensus 369 ~Cy~~~~~~----~~~~P~itf~f~g-g~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~~---~~~ILG~~fl~~~yvvFD~ 440 (531)
.||..++.. +..+|+|+|+|+| +++|+|++++|+++..+ +.+|++++..+. +.||||+.||+++|+|||+
T Consensus 311 ~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~ 388 (413)
T 3vla_A 311 ACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDL 388 (413)
T ss_dssp CEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSSSEEECHHHHTTEEEEEET
T ss_pred ceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCcccceeEehhhhcCeEEEEEC
Confidence 999987642 2479999999965 48999999999998654 678999887642 5799999999999999999
Q ss_pred CCCEEEEeeC
Q 009593 441 ENLKLGWSHS 450 (531)
Q Consensus 441 e~~riGfa~~ 450 (531)
+|+|||||++
T Consensus 389 ~~~riGfa~~ 398 (413)
T 3vla_A 389 ATSRVGFSGT 398 (413)
T ss_dssp TTTEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999999996
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.3e-57 Score=473.22 Aligned_cols=310 Identities=23% Similarity=0.392 Sum_probs=260.0
Q ss_pred ceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCC--CcccccccCCCCCCCCCCCCCCCCccccCC
Q 009593 91 KTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAP--LSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (531)
Q Consensus 91 ~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~--~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~ 168 (531)
..+++.|+.+.+||++|.||||||+|.|++||||+++||+|. .|.. ..|. .++.|||++|+||+..
T Consensus 51 ~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~--~C~~~~~~C~-------~~~~y~~~~SsT~~~~--- 118 (383)
T 2x0b_A 51 SSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS--KCSRLYTACV-------YHKLFDASDSSSYKHN--- 118 (383)
T ss_dssp CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TSCTTSHHHH-------TSCCBCGGGCTTCEEE---
T ss_pred ceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc--CCCCCccccc-------CCCCCCCCCCCcEEEC---
Confidence 457888999999999999999999999999999999999994 4432 2222 3479999999999985
Q ss_pred CCCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeee
Q 009593 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIG 248 (531)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlG 248 (531)
+|.|.+.|++| +++|.+++|+|+|++. .+. +.|||++.+.+..+....+|||||
T Consensus 119 ---------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~g~~f~~~~~dGIlG 172 (383)
T 2x0b_A 119 ---------------GTELTLRYSTG--TVSGFLSQDIITVGGI--------TVT-QMFGEVTEMPALPFMLAEFDGVVG 172 (383)
T ss_dssp ---------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEE-EEEEEEEECCHHHHTTCSSSEEEE
T ss_pred ---------------CcEEEEEcCCc--cEEEEEEeeEEEEcCc--------eEE-EEEEEEEecCCcccccCCCceEec
Confidence 48999999998 5899999999999875 566 999999998775555557899999
Q ss_pred cCCCCCCh------HHHHHhcCCC-CCcEEEeeecC------CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEE
Q 009593 249 LGLGEISV------PSLLAKAGLI-RNSFSMCFDKD------DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETC 314 (531)
Q Consensus 249 LG~~~~S~------~~~L~~~g~i-~~~FS~~L~~~------~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i 314 (531)
||+..++. ..+|++||+| +++||+||+++ ..|.|+|||+|+.++ +.+.|+|+... .+|.|+|++|
T Consensus 173 Lg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~-~~w~v~l~~i 251 (383)
T 2x0b_A 173 MGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT-GVWQIQMKGV 251 (383)
T ss_dssp CSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST-TSCEEEECEE
T ss_pred cCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC-ceEEEEEeEE
Confidence 99998764 5679999999 79999999875 279999999999885 58899998875 8999999999
Q ss_pred EeCCeEe-ecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcE
Q 009593 315 CIGSSCL-KQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNS 393 (531)
Q Consensus 315 ~Vgg~~~-~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~ 393 (531)
.||++.+ ....+.+||||||+++++|+++|++|.++|... . ..+. |.++|..+..+|+|+|+| +|.+
T Consensus 252 ~v~~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~----~-~~g~------~~v~C~~~~~~P~i~f~~-~g~~ 319 (383)
T 2x0b_A 252 SVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK----K-RLFD------YVVKCNEGPTLPDISFHL-GGKE 319 (383)
T ss_dssp EESSCCCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----E-CSSC------EEEEGGGTTTCCCEEEEE-TTEE
T ss_pred EeCCceEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc----c-cCCc------EEEeccccccCceEEEEE-CCEE
Confidence 9999874 345788999999999999999988887776432 2 2222 567787777899999999 8899
Q ss_pred EEEcCCeEEEEeccccceEEE-EEEec-----CCCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 394 FVVNNPVFVIYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 394 ~~i~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
|.|++++|+++........|+ +|+.. .++.||||+.|||++|+|||++|+|||||+++
T Consensus 320 ~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 320 YTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp EEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 999999999876532245898 67654 24689999999999999999999999999863
No 3
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.9e-57 Score=465.96 Aligned_cols=317 Identities=21% Similarity=0.353 Sum_probs=256.8
Q ss_pred CCceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCC
Q 009593 89 GSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (531)
Q Consensus 89 ~~~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~ 168 (531)
....+++.|+.+.+|+++|.||||+|+|.|++||||+++||+|. .|....|. .++.|||++|+||+..
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~--- 78 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV--YCTSPACK-------THSRFQPSQSSTYSQP--- 78 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSGGGT-------TSCCBCGGGCTTCBCC---
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC--CCCccccC-------CCCcCCcccCcceEEC---
Confidence 33457788888899999999999999999999999999999995 34332332 3479999999999984
Q ss_pred CCCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeee
Q 009593 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIG 248 (531)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlG 248 (531)
+|.|.+.|++| +++|.+++|+|+|++. ...++.|||++.+.+..+.....|||||
T Consensus 79 ---------------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilG 133 (351)
T 1tzs_A 79 ---------------GQSFSIQYGTG--SLSGIIGADQVSVEGL--------TVVGQQFGESVTEPGQTFVDAEFDGILG 133 (351)
T ss_dssp ---------------SCEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEE
T ss_pred ---------------CCEEEEEeCCC--CeEEEEEEeEEEECCe--------EECCeEEEEEEeccccccccCCCceEEe
Confidence 49999999998 5899999999999865 6779999999988775554456799999
Q ss_pred cCCCCCC------hHHHHHhcCCC-CCcEEEeeecCC----CCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEe
Q 009593 249 LGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD----SGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCI 316 (531)
Q Consensus 249 LG~~~~S------~~~~L~~~g~i-~~~FS~~L~~~~----~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~V 316 (531)
||+..++ +..+|+++|+| +++||+||++.. .|.|+||++|+.++ +.+.|+++... .+|.|.|++|.|
T Consensus 134 Lg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v 212 (351)
T 1tzs_A 134 LGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ-AYWQIALDNIQV 212 (351)
T ss_dssp CSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE-TTEEEEEEEEEE
T ss_pred cCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC-ceEEEEeCEEEE
Confidence 9998766 45679999999 799999998762 79999999999874 47777777654 799999999999
Q ss_pred CCeEee-cCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEE
Q 009593 317 GSSCLK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFV 395 (531)
Q Consensus 317 gg~~~~-~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~ 395 (531)
+++.+. .....+||||||++++||+++|++|.+++... ... +. |.++|..+..+|+|+|+| +|.++.
T Consensus 213 ~~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~----~~~-g~------~~~~C~~~~~~P~i~f~f-~g~~~~ 280 (351)
T 1tzs_A 213 GGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAA----PVD-GE------YAVECANLNVMPDVTFTI-NGVPYT 280 (351)
T ss_dssp TTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----ECS-SS------EEECGGGGGGSCCEEEEE-TTEEEE
T ss_pred CCceEEcCCCceEEeccCCcceeCCHHHHHHHHHHhCCc----ccC-Ce------EEEeCCCCccCCcEEEEE-CCEEEE
Confidence 998853 45678999999999999999998888776432 222 21 566776666899999999 889999
Q ss_pred EcCCeEEEEeccccceEEE-EEEec-----CCCceeeCccceeceEEEEeCCCCEEEEeeCCCCCC
Q 009593 396 VNNPVFVIYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDL 455 (531)
Q Consensus 396 i~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~~~ 455 (531)
|++++|+++........|+ +|+.. ..+.||||+.|||++|+|||++++|||||+++|...
T Consensus 281 i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~ 346 (351)
T 1tzs_A 281 LSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSH 346 (351)
T ss_dssp ECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC----
T ss_pred ECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccc
Confidence 9999999876432245797 57754 246799999999999999999999999999999763
No 4
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4.6e-57 Score=467.99 Aligned_cols=309 Identities=24% Similarity=0.394 Sum_probs=259.0
Q ss_pred CceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCC
Q 009593 90 SKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSH 169 (531)
Q Consensus 90 ~~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 169 (531)
...+++.|+.+.+||++|.||||||+|.|++||||+++||+|. .|....|. .++.|||++|+||+...
T Consensus 45 ~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~--~C~~~~C~-------~~~~y~~~~SsT~~~~~--- 112 (370)
T 3psg_A 45 IGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV--YCSSLACS-------DHNQFNPDDSSTFEATS--- 112 (370)
T ss_dssp SCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSGGGT-------TSCCBCGGGCTTCEEEE---
T ss_pred cceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC--CCCCcccC-------CCCCCCCccCcCcEECC---
Confidence 4567899999999999999999999999999999999999995 44333333 34799999999999854
Q ss_pred CCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeec
Q 009593 170 RLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGL 249 (531)
Q Consensus 170 ~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGL 249 (531)
|.|.+.|++| +++|.+++|+|+|++. ...++.|||++.+.+..+....+||||||
T Consensus 113 ---------------~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~~~~~~~dGIlGL 167 (370)
T 3psg_A 113 ---------------QELSITYGTG--SMTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFLYYAPFDGILGL 167 (370)
T ss_dssp ---------------EEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEEC
T ss_pred ---------------cEEEEEeCCc--eEEEEEEEEEEeeCCc--------ccCCeEEEEEEeecccccccCCccceecc
Confidence 8999999998 5899999999999875 77899999999988766555678999999
Q ss_pred CCCCCC------hHHHHHhcCCC-CCcEEEeeecC--CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCe
Q 009593 250 GLGEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSS 319 (531)
Q Consensus 250 G~~~~S------~~~~L~~~g~i-~~~FS~~L~~~--~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~ 319 (531)
|++.++ +..+|+++|+| +++||+||.++ ..|.|+|||+|+.++ +.+.|+|+... .+|.|+|++|.||++
T Consensus 168 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~-~~w~v~l~~i~v~g~ 246 (370)
T 3psg_A 168 AYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE-GYWQITLDSITMDGE 246 (370)
T ss_dssp SCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE-TTEEEEECEEESSSS
T ss_pred CCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc-ceeEEEEeEEEECCE
Confidence 998765 35679999999 79999999975 579999999999874 57888888765 899999999999998
Q ss_pred Eee-cCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcC
Q 009593 320 CLK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNN 398 (531)
Q Consensus 320 ~~~-~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~ 398 (531)
.+. ...+.+||||||+++++|+++|++|.++| ++.....+ +|.++|.....+|+|+|+| +|.+++|++
T Consensus 247 ~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i----~a~~~~~g------~~~v~C~~~~~lP~i~f~~-~g~~~~l~~ 315 (370)
T 3psg_A 247 TIACSGGCQAIVDTGTSLLTGPTSAIANIQSDI----GASENSDG------EMVISCSSIDSLPDIVFTI-DGVQYPLSP 315 (370)
T ss_dssp EEECTTCEEEEECTTCCSEEEEHHHHHHHHHHT----TCEECTTC------CEECCGGGGGGCCCEEEEE-TTEEEEECH
T ss_pred EEecCCCceEEEcCCCCcEECCHHHHHHHHHHh----CCcccCCC------cEEEECCCcccCCcEEEEE-CCEEEEECH
Confidence 775 35688999999999999999988876665 33322212 3888998777899999999 899999999
Q ss_pred CeEEEEeccccceEEE-EEEecC-----CCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 399 PVFVIYGTQVVTGFCL-AIQPVD-----GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 399 ~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
++|+++ . ...|+ ++...+ ++.||||+.|||++|+|||++|+|||||++.
T Consensus 316 ~~yi~~-~---~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 316 SAYILQ-D---DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHHEEE-C---SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHhccc-C---CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 999998 3 33697 465532 2469999999999999999999999999973
No 5
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.7e-56 Score=461.48 Aligned_cols=316 Identities=20% Similarity=0.268 Sum_probs=259.9
Q ss_pred ceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CC---CCCCCcccccccCCCCCCCCCCCCCCCCcccc
Q 009593 91 KTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CV---RCAPLSASYYNSLDRDLNEYSPSASSTSKHLS 166 (531)
Q Consensus 91 ~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~---~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~ 166 (531)
..+++.|+.+.+|+++|.||||+|+|.|+|||||+++||+|. |. .|. .++.|+|++|+||+...
T Consensus 8 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~------------~~~~y~~~~SsT~~~~~ 75 (361)
T 1mpp_A 8 DTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCV------------GKRFFDPSSSSTFKETD 75 (361)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCC------------SSCCBCGGGCTTCEEEE
T ss_pred ceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCC------------CCCcCCCccCCceEecC
Confidence 347788888999999999999999999999999999999996 65 453 23789999999999854
Q ss_pred CCCCCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccC-----CCCCCC
Q 009593 167 CSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSG-----GYLDGV 241 (531)
Q Consensus 167 C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g-----~~~~~~ 241 (531)
|.|.+.|++| +++|.+++|+|+|++. .+.++.|||++.+.+ ..+...
T Consensus 76 ------------------~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~~~ 127 (361)
T 1mpp_A 76 ------------------YNLNITYGTG--GANGIYFRDSITVGGA--------TVKQQTLAYVDNVSGPTAEQSPDSEL 127 (361)
T ss_dssp ------------------EEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEESGGGSSCTTCSS
T ss_pred ------------------CeEEEEECCc--eEEEEEEEEEEEECCE--------EEeceEEEEEEeccCccccccccccC
Confidence 8999999998 4899999999999865 678999999999887 455445
Q ss_pred CCCeeeecCCCCCCh------------HHHHHhcCCC-CCcEEEeeecC-CCCcEEECCCCCCCC-eeeeeeecCCC---
Q 009593 242 APDGLIGLGLGEISV------------PSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQGPATQ-QSTSFLASNGK--- 303 (531)
Q Consensus 242 ~~dGIlGLG~~~~S~------------~~~L~~~g~i-~~~FS~~L~~~-~~G~l~fGg~d~~~~-~~~~~v~~~~~--- 303 (531)
..|||||||+..++. +.+|+++|+| +++||+||+++ ..|.|+||++|+.++ +.+.|+|+...
T Consensus 128 ~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~ 207 (361)
T 1mpp_A 128 FLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGG 207 (361)
T ss_dssp CCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTE
T ss_pred CCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCc
Confidence 779999999986654 4579999999 79999999985 579999999998774 34555554333
Q ss_pred ceeEEEEeeEEEeCCeEee-cCcceEE-EecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCC
Q 009593 304 YITYIIGVETCCIGSSCLK-QTSFKAI-VDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKL 381 (531)
Q Consensus 304 ~~~y~V~l~~i~Vgg~~~~-~~~~~ai-iDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~ 381 (531)
..+|.|.|++|.|+++.+. .....+| |||||++++||+++|++|.++|.... ....+ .|.++|..+..+
T Consensus 208 ~~~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~----~~~~g-----~~~~~C~~~~~~ 278 (361)
T 1mpp_A 208 YFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDA----TESQQ-----GYTVPCSKYQDS 278 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTC----EEETT-----EEEEEHHHHTTC
T ss_pred eeEEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcc----cCCCC-----cEEEECCCcccC
Confidence 2399999999999998874 3567899 99999999999999999988875532 11112 145556544577
Q ss_pred -CeEEEEec-C-----CcEEEEcCCeEEEEeccccceEEE-EEEecCCCceeeCccceeceEEEEeCCCCEEEEeeCCCC
Q 009593 382 -PSVKLMFP-Q-----NNSFVVNNPVFVIYGTQVVTGFCL-AIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQ 453 (531)
Q Consensus 382 -P~itf~f~-g-----g~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~ 453 (531)
|+|+|+|. + |.++.|++++|+++...+ ...|+ +|+...++.||||+.|||++|+|||++++|||||+++|+
T Consensus 279 ~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~-~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~ 357 (361)
T 1mpp_A 279 KTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKS-GETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASG 357 (361)
T ss_dssp CCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSS-SCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTT
T ss_pred CCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCC-CCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccC
Confidence 99999994 4 789999999999986532 56897 787755568999999999999999999999999999998
Q ss_pred CCC
Q 009593 454 DLN 456 (531)
Q Consensus 454 ~~~ 456 (531)
...
T Consensus 358 ~~~ 360 (361)
T 1mpp_A 358 YEN 360 (361)
T ss_dssp TCC
T ss_pred CCC
Confidence 643
No 6
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=6.4e-56 Score=452.96 Aligned_cols=307 Identities=25% Similarity=0.397 Sum_probs=258.1
Q ss_pred ceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCC
Q 009593 91 KTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSH 169 (531)
Q Consensus 91 ~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 169 (531)
..+++.|+.+.+|+++|.||||+|+|.|++||||+++||+|. |.. ..|. .++.|||++|+||+..
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~---~~C~-------~~~~y~~~~SsT~~~~---- 68 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGS---LACF-------LHSKYDHEASSSYKAN---- 68 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCS---HHHH-------TSCCBCGGGCTTCEEE----
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCC---cccC-------CcCcCCcccCcCeEEC----
Confidence 356788888999999999999999999999999999999995 544 2332 2378999999999984
Q ss_pred CCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeec
Q 009593 170 RLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGL 249 (531)
Q Consensus 170 ~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGL 249 (531)
+|.|.+.|++| +++|.+++|+|+|++. ...++.|||++.+.+..+.....||||||
T Consensus 69 --------------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~f~~~~~~GilGL 124 (329)
T 1dpj_A 69 --------------GTEFAIQYGTG--SLEGYISQDTLSIGDL--------TIPKQDFAEATSEPGLTFAFGKFDGILGL 124 (329)
T ss_dssp --------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCHHHHTTCSCSEEEEC
T ss_pred --------------CcEEEEEECCc--eEEEEEEEEEEEECCe--------EECCeEEEEEEecCccccccCCcceEEEe
Confidence 48999999997 7899999999999865 67799999999887632233467999999
Q ss_pred CCCCCCh------HHHHHhcCCC-CCcEEEeeecC-----CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEe
Q 009593 250 GLGEISV------PSLLAKAGLI-RNSFSMCFDKD-----DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCI 316 (531)
Q Consensus 250 G~~~~S~------~~~L~~~g~i-~~~FS~~L~~~-----~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~V 316 (531)
|+..+++ ..+|+++|+| +++||+||.+. ..|.|+||++|+.++ +.+.|+++... .+|.|.|++|.|
T Consensus 125 g~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v 203 (329)
T 1dpj_A 125 GYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK-AYWEVKFEGIGL 203 (329)
T ss_dssp SCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB-TTBEEEEEEEEE
T ss_pred CCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC-ceEEEEeeeEEE
Confidence 9998765 4569999999 79999999764 369999999999875 47888888765 899999999999
Q ss_pred CCeEeecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEE
Q 009593 317 GSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVV 396 (531)
Q Consensus 317 gg~~~~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i 396 (531)
+++.+......+||||||++++||+++|++|.+++... .. ...||.++|.....+|+|+|+| +|.+++|
T Consensus 204 ~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~------~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i 272 (329)
T 1dpj_A 204 GDEYAELESHGAAIDTGTSLITLPSGLAEMINAEIGAK----KG------WTGQYTLDCNTRDNLPDLIFNF-NGYNFTI 272 (329)
T ss_dssp TTEEEECSSCEEEECTTCSCEEECHHHHHHHHHHHTCE----EC------TTSSEEECGGGGGGCCCEEEEE-TTEEEEE
T ss_pred CCeEecCCCccEEeeCCCCcEECCHHHHHHHHHHhCCc----cC------CCCeEEEECCCCCcCCcEEEEE-CCEEEEE
Confidence 99988766789999999999999999999988877432 11 1225888897777899999999 7899999
Q ss_pred cCCeEEEEeccccceEEE-EEEec-----CCCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 397 NNPVFVIYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 397 ~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
++++|+++.. ..|+ +|+.. .++.||||+.|||++|+|||++++|||||+++
T Consensus 273 ~~~~y~~~~~----~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 273 GPYDYTLEVS----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp CTTTSEEEET----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhEecCC----CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 9999998763 4797 67654 23689999999999999999999999999864
No 7
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=4.1e-56 Score=453.45 Aligned_cols=306 Identities=20% Similarity=0.376 Sum_probs=255.8
Q ss_pred eeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCC
Q 009593 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (531)
Q Consensus 92 ~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~ 171 (531)
.+++.|+.+.+|+++|.||||+|+|.|++||||+++||+|. .|....|. .++.|||++|+|++...
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~~----- 68 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS--HCSAQACS-------NHNKFKPRQSSTYVETG----- 68 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT--TCCSHHHH-------TSCCBCGGGCTTCEEEE-----
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC--CCCccccc-------CCCcCCCccCCCeEeCC-----
Confidence 35677888899999999999999999999999999999995 44322332 23789999999999854
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCC
Q 009593 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (531)
Q Consensus 172 C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~ 251 (531)
|.|.+.|++| +++|.+++|+|+|++. ...++.|||++.+.+..+.....|||||||+
T Consensus 69 -------------~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (324)
T 1am5_A 69 -------------KTVDLTYGTG--GMRGILGQDTVSVGGG--------SDPNQELGESQTEPGPFQAAAPFDGILGLAY 125 (324)
T ss_dssp -------------EEEEEECSSC--EEEEEEEEEEEESSSS--------CEEEEEEEEEEECCSTTTTTCSSSEEEECSC
T ss_pred -------------cEEEEEECCC--CeEEEEEECceeECCc--------EEcccEEEEEEecccccccCCCCceEEecCC
Confidence 8999999998 5699999999999875 6679999999998876555557899999999
Q ss_pred CCCC------hHHHHHhcCCC-CCcEEEeeecC--CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCeEe
Q 009593 252 GEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSSCL 321 (531)
Q Consensus 252 ~~~S------~~~~L~~~g~i-~~~FS~~L~~~--~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~ 321 (531)
..++ +..+|+++|+| +++||+||++. ..|.|+||++|+.++ +.+.|+|+... .+|.|.|++|.|+++.+
T Consensus 126 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~ 204 (324)
T 1am5_A 126 PSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE-KYWQVALDGITVNGQTA 204 (324)
T ss_dssp GGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE-TTEEEEECEEEETTEEC
T ss_pred ccccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC-cEEEEEEeEEEECCcee
Confidence 8765 46779999999 79999999875 479999999999874 46666666543 79999999999999876
Q ss_pred ecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCCeE
Q 009593 322 KQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVF 401 (531)
Q Consensus 322 ~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~~y 401 (531)
......+||||||++++||+++|++|.+++... ...+ .|.++|.....+|+|+|+| +|.+++|++++|
T Consensus 205 ~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-----~~~g------~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y 272 (324)
T 1am5_A 205 ACEGCQAIVDTGTSKIVAPVSALANIMKDIGAS-----ENQG------EMMGNCASVQSLPDITFTI-NGVKQPLPPSAY 272 (324)
T ss_dssp CCCCEEEEECTTCSSEEECTTTHHHHHHHHTCE-----ECCC------CEECCTTSSSSSCCEEEEE-TTEEEEECHHHH
T ss_pred eccCceEEEecCCccEECCHHHHHHHHHHhCCc-----ccCC------cEEEeCCCcccCCcEEEEE-CCEEEEECHHHh
Confidence 433488999999999999999999998877543 1112 1677887777899999999 889999999999
Q ss_pred EEEeccccceEEE-EEEecC-----CCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 402 VIYGTQVVTGFCL-AIQPVD-----GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 402 ~~~~~~~~~~~Cl-~i~~~~-----~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
+++. +..|+ +++..+ ++.||||+.|||++|+|||++++|||||+++
T Consensus 273 ~~~~----~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 273 IEGD----QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp EEES----SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred cccC----CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 9876 34797 676642 3689999999999999999999999999874
No 8
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1e-55 Score=452.40 Aligned_cols=310 Identities=20% Similarity=0.342 Sum_probs=253.9
Q ss_pred eeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCC
Q 009593 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (531)
Q Consensus 92 ~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~ 171 (531)
.+++.+. +.+|+++|.||||+|+|.|++||||+++||+|.|..|...........|..++.|||++|+||+...
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~----- 77 (334)
T 1j71_A 4 PTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN----- 77 (334)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE-----
T ss_pred eEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC-----
Confidence 4556665 7899999999999999999999999999999753234321000000123355899999999999854
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCC
Q 009593 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (531)
Q Consensus 172 C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~ 251 (531)
|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++... ..|||||||+
T Consensus 78 -------------~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~-------~~~GilGLg~ 128 (334)
T 1j71_A 78 -------------QDFSIEYGDL-TSSQGSFYKDTVGFGGI--------SIKNQQFADVTTTS-------VDQGIMGIGF 128 (334)
T ss_dssp -------------EEEEEEBTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEECSC
T ss_pred -------------CceEEEECCC-CEEEEEEEEEEEEECCE--------EEccEEEEEEEecC-------CCccEEEEcC
Confidence 8999999997 67899999999999864 67899999999763 4589999999
Q ss_pred CCC--------ChHHHHHhcCCC-CCcEEEeeecC--CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCe
Q 009593 252 GEI--------SVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSS 319 (531)
Q Consensus 252 ~~~--------S~~~~L~~~g~i-~~~FS~~L~~~--~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~ 319 (531)
..+ +++.+|+++|+| +++||+||.+. ..|.|+||++|+.++ +.+.|+|+... .+|.|.|++|.|||+
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g~ 207 (334)
T 1j71_A 129 TADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS-VELRVHLGSINFDGT 207 (334)
T ss_dssp GGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS-SSCEEEEEEEEETTE
T ss_pred CcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC-CeEEEEEeEEEECCE
Confidence 865 678899999999 79999999863 579999999999885 47888888765 799999999999999
Q ss_pred EeecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeee-cCCCCCCCCCeEEEEecCCcEEEEcC
Q 009593 320 CLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYK-SSSQRLPKLPSVKLMFPQNNSFVVNN 398 (531)
Q Consensus 320 ~~~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~-~~~~~~~~~P~itf~f~gg~~~~i~~ 398 (531)
.+. ....+||||||++++||+++|++|.++|..... .... .|. ++|. .+|.|+|+|.+|.++.|++
T Consensus 208 ~~~-~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~~-----~~~~~~C~---~~p~i~f~f~~g~~~~i~~ 274 (334)
T 1j71_A 208 SVS-TNADVVLDSGTTITYFSQSTADKFARIVGATWD----SRNE-----IYRLPSCD---LSGDAVFNFDQGVKITVPL 274 (334)
T ss_dssp EEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----TTTT-----EEECSSSC---CCSEEEEEESTTCEEEEEG
T ss_pred ecc-CCccEEEeCCCCcEecCHHHHHHHHHHcCCccc----CCCc-----eEEEEcCC---CCCceEEEEcCCcEEEECH
Confidence 886 457899999999999999999999888865542 1111 255 7775 3899999997789999999
Q ss_pred CeEEEEeccccceEEEE-EEecCCCceeeCccceeceEEEEeCCCCEEEEeeCCCCC
Q 009593 399 PVFVIYGTQVVTGFCLA-IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQD 454 (531)
Q Consensus 399 ~~y~~~~~~~~~~~Cl~-i~~~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~~ 454 (531)
++|+++..+ +..|+. +... +.||||+.|||++|+|||++++|||||+++|..
T Consensus 275 ~~y~~~~~~--~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 275 SELILKDSD--SSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp GGGEEECSS--SSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred HHheeecCC--CCeeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 999998644 335975 5544 469999999999999999999999999999975
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=7.7e-56 Score=451.18 Aligned_cols=308 Identities=21% Similarity=0.383 Sum_probs=257.0
Q ss_pred ceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCC
Q 009593 91 KTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHR 170 (531)
Q Consensus 91 ~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~ 170 (531)
..+++.|+.+.+|+++|.||||+|+|.|++||||+++||+|. .|....|. .++.|||++|+||+...
T Consensus 4 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~~---- 70 (323)
T 3cms_A 4 ASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI--YCKSNACK-------NHQRFDPRKSSTFQNLG---- 70 (323)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHHHH-------TSCCBCGGGCTTCEEEE----
T ss_pred ceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC--CCCccccc-------CCCCCCCccCCCeEECC----
Confidence 346788888999999999999999999999999999999995 44333332 34789999999999854
Q ss_pred CCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecC
Q 009593 171 LCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLG 250 (531)
Q Consensus 171 ~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG 250 (531)
|.|.+.|++| +++|.+++|+|+|++. ...++.|||++.+.+..+.....|||||||
T Consensus 71 --------------~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg 126 (323)
T 3cms_A 71 --------------KPLSIHYGTG--SMQGILGYDTVTVSNI--------VDIQQTVGLSTQEPGDFFTYAEFDGILGMA 126 (323)
T ss_dssp --------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHHSSCSEEEECS
T ss_pred --------------cEEEEEeCCC--CeEEEEEEEEEEECCe--------EEeccEEEEEEecccccccccCCceEEecC
Confidence 8999999997 5899999999999865 667999999998876433333679999999
Q ss_pred CCCCC------hHHHHHhcCCC-CCcEEEeeecC-CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCeEe
Q 009593 251 LGEIS------VPSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSSCL 321 (531)
Q Consensus 251 ~~~~S------~~~~L~~~g~i-~~~FS~~L~~~-~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~ 321 (531)
++.++ +..+|+++|+| +++||+||+++ ..|.|+||++|+.++ +.+.|+|+... .+|.|+|++|.|+++.+
T Consensus 127 ~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~ 205 (323)
T 3cms_A 127 YPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ-QYWQFTVDSVTISGVVV 205 (323)
T ss_dssp CGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB-TTBEEEEEEEEETTEEE
T ss_pred cchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC-CeEEEEEeeEEECCEEe
Confidence 98764 46779999999 79999999875 459999999999875 58888888765 89999999999999987
Q ss_pred e-cCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCCe
Q 009593 322 K-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPV 400 (531)
Q Consensus 322 ~-~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~~ 400 (531)
. .....+||||||++++||+++|++|.+++.. ...... .|.++|.....+|+|+|+| +|.++.|++++
T Consensus 206 ~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~----~~~~~g------~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~ 274 (323)
T 3cms_A 206 ACEGGCQAILDTGTSKLVGPSSDILNIQQAIGA----TQNQYG------EFDIDCDNLSYMPTVVFEI-NGKMYPLTPSA 274 (323)
T ss_dssp ESTTCEEEEECTTCCSEEECHHHHHHHHHHHTC----EEETTT------EEEECTTCTTTSCCEEEEE-TTEEEEECHHH
T ss_pred ecCCCcEEEEecCCccEeCCHHHHHHHHHHhCC----eecCCC------cEEEECCCCccCceEEEEE-CCEEEEECHHH
Confidence 5 3567899999999999999999888877643 222111 2667887777899999999 88999999999
Q ss_pred EEEEeccccceEEE-EEEecC-CCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 401 FVIYGTQVVTGFCL-AIQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 401 y~~~~~~~~~~~Cl-~i~~~~-~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
|+++ . ...|+ +|+..+ ++.||||+.|||++|+|||++++|||||+++
T Consensus 275 y~~~-~---~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 275 YTSQ-D---QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp HEEE-E---TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hccC-C---CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 9998 2 56897 477653 4689999999999999999999999999863
No 10
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=8.3e-56 Score=454.53 Aligned_cols=323 Identities=19% Similarity=0.318 Sum_probs=257.1
Q ss_pred eeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCC
Q 009593 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (531)
Q Consensus 92 ~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~ 171 (531)
.+++.| .+..|+++|.||||+|+|.|++||||+++||+|.|..|....+......|..++.|||++|+||+...
T Consensus 4 ~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~----- 77 (342)
T 2qzx_A 4 AVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN----- 77 (342)
T ss_dssp EEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE-----
T ss_pred eEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC-----
Confidence 445655 46789999999999999999999999999999753234321100001123356899999999999854
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCC
Q 009593 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (531)
Q Consensus 172 C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~ 251 (531)
|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++... ..|||||||+
T Consensus 78 -------------~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~-------~~~GilGLg~ 128 (342)
T 2qzx_A 78 -------------TRFDIKYGDG-SYAKGKLYKDTVGIGGV--------SVRDQLFANVWSTS-------ARKGILGIGF 128 (342)
T ss_dssp -------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEEC-------SSSCEEECSC
T ss_pred -------------CcEEEEeCCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEecC-------CCcCEEEEcc
Confidence 8999999997 67899999999999864 67799999999763 4589999999
Q ss_pred CCC--------ChHHHHHhcCCC-CCcEEEeeecC--CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCe
Q 009593 252 GEI--------SVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSS 319 (531)
Q Consensus 252 ~~~--------S~~~~L~~~g~i-~~~FS~~L~~~--~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~ 319 (531)
..+ +++.+|+++|+| +++||+||.+. ..|.|+||++|+.++ +.+.|+|+... .+|.|.|++|.|||+
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g~ 207 (342)
T 2qzx_A 129 QSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE-KKLTVGLRSVNVRGR 207 (342)
T ss_dssp GGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS-SSCEEEEEEEEETTE
T ss_pred ccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC-ceEEEEEeEEEECCE
Confidence 865 678899999999 79999999863 579999999999874 47778887765 699999999999999
Q ss_pred EeecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCC
Q 009593 320 CLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNP 399 (531)
Q Consensus 320 ~~~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~ 399 (531)
.+. ....+||||||++++||+++|++|.++|......... . ...|.++|. .+|.|+|+|.+|.++.|+++
T Consensus 208 ~~~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~--~----~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~ 277 (342)
T 2qzx_A 208 NVD-ANTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSA--G----NKVYVADCK---TSGTIDFQFGNNLKISVPVS 277 (342)
T ss_dssp EEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTT--S----CEEEEECTT---CCCEEEEEETTTEEEEEEGG
T ss_pred ecC-CCcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccC--C----CcEEEEECC---CCCcEEEEECCCcEEEEcHH
Confidence 886 4578999999999999999999998888654421110 1 123777886 38999999977899999999
Q ss_pred eEEEEec---cccceEEEEEEecCCCceeeCccceeceEEEEeCCCCEEEEeeCCCCCCCCCCcccC
Q 009593 400 VFVIYGT---QVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPL 463 (531)
Q Consensus 400 ~y~~~~~---~~~~~~Cl~i~~~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~~~~~~~~~p~ 463 (531)
+|+++.. ......|++..... +.||||+.|||++|+|||++++|||||+++|.. +.++++|
T Consensus 278 ~~~~~~~~~~~~~~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~--~~~i~~i 341 (342)
T 2qzx_A 278 EFLFQTYYTSGKPFPKCEVRIRES-EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS--ESDIVAI 341 (342)
T ss_dssp GGEECCBCTTSCBCSSEEESEEEC-SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS--CCCEEEC
T ss_pred HhcccccccCCCCCCccEEEEecC-CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC--CCCeEEc
Confidence 9998742 11145797543333 469999999999999999999999999999975 3344554
No 11
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=7.4e-56 Score=464.65 Aligned_cols=337 Identities=20% Similarity=0.335 Sum_probs=261.0
Q ss_pred eeecC-CCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCC
Q 009593 92 TMSLG-NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHR 170 (531)
Q Consensus 92 ~~~l~-~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~ 170 (531)
.+|+. |+.+.+||++|.||||+|+|.|+|||||+++||+|. .| .+|+||+.++|.+.
T Consensus 11 ~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~~--------------------~~Sst~~~~~C~s~ 68 (403)
T 3aup_A 11 VLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE--QQ--------------------YSSKTYQAPFCHST 68 (403)
T ss_dssp EEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--SC--------------------CCCSSCBCCCTTBH
T ss_pred EEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCC--CC--------------------CCCCCCCccCCCCc
Confidence 46676 777889999999999999999999999999999993 22 35899999999988
Q ss_pred CCCCC-------------CCCCCCCCCCceEEecC-CCCceeeEEEEEEEEEEecCCCCc---cccccccceEEEEEEec
Q 009593 171 LCDLG-------------TSCQNPKQPCPYTMDYY-TENTSSSGLLVEDILHLISGGDNA---LKNSVQASVIIGCGMKQ 233 (531)
Q Consensus 171 ~C~~~-------------~~C~~~~~~c~~~i~Y~-~g~s~~~G~~~~D~v~lg~~~~~~---~~~~~~~~~~fG~~~~~ 233 (531)
.|... +.|.+ +.|.|.+.|+ ++ +.+.|.+++|+|+|++.++.. .....+.++.|||++.+
T Consensus 69 ~C~~~~~~~c~~c~~~~~s~~~~--~~~~~~~~Y~~d~-~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~ 145 (403)
T 3aup_A 69 QCSRANTHQCLSCPAASRPGCHK--NTCGLMSTNPITQ-QTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSF 145 (403)
T ss_dssp HHHHTTCCCEEECSSSCBTTBCS--SEEEEEEEETTTT-EEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGG
T ss_pred cccCccccCccccCCCCCCCCCC--CcceeEeecCCCC-ceeeEEEEEEEEEecccCCccccccccccccCEEEECCccc
Confidence 88643 12322 4699999998 65 789999999999998743210 00135679999999987
Q ss_pred cCCCCCCCCCCeeeecCCCCCChHHHHHhcCCCCCcEEEeeec--CCCCcEEECCCCCCCC----e-----eeeeeecCC
Q 009593 234 SGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDK--DDSGRIFFGDQGPATQ----Q-----STSFLASNG 302 (531)
Q Consensus 234 ~g~~~~~~~~dGIlGLG~~~~S~~~~L~~~g~i~~~FS~~L~~--~~~G~l~fGg~d~~~~----~-----~~~~v~~~~ 302 (531)
.+........|||||||++.+|++.||++..+.+++||+||.+ ...|.|+||+ |+.++ + .+.|+|+..
T Consensus 146 ~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~ 224 (403)
T 3aup_A 146 LVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTI 224 (403)
T ss_dssp GGSSSSSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEE
T ss_pred ccccCCCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeeccccc
Confidence 6541222467999999999999999997655458999999987 3679999999 76433 1 444544432
Q ss_pred C-ceeEEEEeeEEEeCCeEe-ec-Cc---------ceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceee
Q 009593 303 K-YITYIIGVETCCIGSSCL-KQ-TS---------FKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCC 370 (531)
Q Consensus 303 ~-~~~y~V~l~~i~Vgg~~~-~~-~~---------~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~C 370 (531)
. ..+|.|+|++|.||++.+ .. .. ..+||||||++++||+++|++|.++|.++++..........+++|
T Consensus 225 ~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c 304 (403)
T 3aup_A 225 TLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLC 304 (403)
T ss_dssp CTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCE
T ss_pred CCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCce
Confidence 2 269999999999999988 42 22 249999999999999999999999998876543221112245678
Q ss_pred eecCCCCCCCCCeEEEEecCC--cEEEEcCCeEEEEeccccceEEEEEEecCC---CceeeCccceeceEEEEeCCCCEE
Q 009593 371 YKSSSQRLPKLPSVKLMFPQN--NSFVVNNPVFVIYGTQVVTGFCLAIQPVDG---DIGTIGQNFMTGYRVVFDRENLKL 445 (531)
Q Consensus 371 y~~~~~~~~~~P~itf~f~gg--~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~~---~~~ILG~~fl~~~yvvFD~e~~ri 445 (531)
|. |..+..+|+|+|+|.|+ .+|.|++++|+++..+ +.+|++|+..+. +.||||+.|||++|+|||++|+||
T Consensus 305 ~~--c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rI 380 (403)
T 3aup_A 305 FN--SNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRV 380 (403)
T ss_dssp EC--GGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEE
T ss_pred EE--CCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEE
Confidence 74 55556899999999655 5999999999987653 568999988653 579999999999999999999999
Q ss_pred EE-------eeCCCCCCCCC
Q 009593 446 GW-------SHSNCQDLNDG 458 (531)
Q Consensus 446 Gf-------a~~~C~~~~~~ 458 (531)
|| ++++|++..+.
T Consensus 381 Gf~A~~~~~~~~~C~~~~~~ 400 (403)
T 3aup_A 381 GFSTSSLHSHGVKCADLFNF 400 (403)
T ss_dssp EEESSCGGGGTCCGGGSCCT
T ss_pred EEecccccccCCCccccccc
Confidence 99 77788876543
No 12
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.9e-55 Score=447.30 Aligned_cols=300 Identities=25% Similarity=0.412 Sum_probs=251.0
Q ss_pred CCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 009593 97 NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLG 175 (531)
Q Consensus 97 ~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 175 (531)
+..+.+|+++|.||||+|+|.|++||||+++||+|. |..| |. .++.|+|++|+||+..
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c----~~-------~~~~y~~~~SsT~~~~---------- 69 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC----GS-------GQTKYDPNQSSTYQAD---------- 69 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC----CT-------TSCCBCGGGCTTCEEE----------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH----hc-------CCCCCCcccCCCeeeC----------
Confidence 455789999999999999999999999999999997 8777 21 2479999999999983
Q ss_pred CCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC
Q 009593 176 TSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS 255 (531)
Q Consensus 176 ~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~~~S 255 (531)
.|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++.+++.|... ..|||||||+..++
T Consensus 70 --------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~f~~~-~~~GilGLg~~~~s 131 (325)
T 2apr_A 70 --------GRTWSISYGDG-SSASGILAKDNVNLGGL--------LIKGQTIELAKREAASFASG-PNDGLLGLGFDTIT 131 (325)
T ss_dssp --------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTS-SCSEEEECSCGGGC
T ss_pred --------CCEEEEEECCC-CCEEEEEEEEEEEECCE--------EECcEEEEEEeccCcccccC-CCceEEEeCCcccc
Confidence 48999999997 67899999999999865 66799999999887655432 47999999998764
Q ss_pred -------hHHHHHhcCCC-CCcEEEeeec---CCCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCeEeec
Q 009593 256 -------VPSLLAKAGLI-RNSFSMCFDK---DDSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSSCLKQ 323 (531)
Q Consensus 256 -------~~~~L~~~g~i-~~~FS~~L~~---~~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~~~ 323 (531)
++.+|+++|+| +++||+||++ ...|.|+||++|+.++ +.+.|+|+.....+|.|.+++|.||+ .+..
T Consensus 132 ~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~~~ 210 (325)
T 2apr_A 132 TVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-STVA 210 (325)
T ss_dssp SSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EEEE
T ss_pred cccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-EecC
Confidence 56789999999 7999999954 3679999999998874 47777777544479999999999999 4554
Q ss_pred CcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCCeEEE
Q 009593 324 TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVI 403 (531)
Q Consensus 324 ~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~~y~~ 403 (531)
..+.+||||||++++||+++|++++++|.+++... .. |.++|.. ..+|+|+|+| +|.++.|++++|++
T Consensus 211 ~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~----g~------~~~~C~~-~~~p~i~f~f-~g~~~~ip~~~~~~ 278 (325)
T 2apr_A 211 SSFDGILDTGTTLLILPNNIAASVARAYGASDNGD----GT------YTISCDT-SAFKPLVFSI-NGASFQVSPDSLVF 278 (325)
T ss_dssp CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS----SC------EEECSCG-GGCCCEEEEE-TTEEEEECGGGGEE
T ss_pred CCceEEEecCCccEECCHHHHHHHHHHHhcccCCC----Ce------EEEECCC-CCCCcEEEEE-CCEEEEECHHHEEE
Confidence 67899999999999999999999999998776432 11 5667763 2489999999 55699999999988
Q ss_pred EeccccceEEEE-EEecCCCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 404 YGTQVVTGFCLA-IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 404 ~~~~~~~~~Cl~-i~~~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
+.. +..|++ ++..+.+.||||+.|||++|+|||++++|||||+..
T Consensus 279 ~~~---~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 279 EEF---QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EEE---TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cCC---CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 654 458986 555445689999999999999999999999999863
No 13
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.1e-55 Score=449.45 Aligned_cols=307 Identities=23% Similarity=0.393 Sum_probs=254.3
Q ss_pred eeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCC
Q 009593 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (531)
Q Consensus 92 ~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~ 171 (531)
.++|.|+.+.+||++|.||||+|+|.|++||||+++||+|. .|....|. .++.|||++|+|++...
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~~----- 67 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI--YCKSNVCK-------NHHRFDPRKSSTFRNLG----- 67 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHHHH-------TSCCBCGGGCTTCEEEE-----
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC--CCCccccC-------CCCCCCCCCCcCeEcCC-----
Confidence 35788999999999999999999999999999999999995 44333332 34799999999999854
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCC
Q 009593 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (531)
Q Consensus 172 C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~ 251 (531)
|.|.+.|++| +++|.+++|+|+|++. ...++.|||++...+..+....+|||||||+
T Consensus 68 -------------~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 124 (320)
T 4aa9_A 68 -------------KPLSIHYGTG--SMEGFLGYDTVTVSNI--------VDPNQTVGLSTEQPGEVFTYSEFDGILGLAY 124 (320)
T ss_dssp -------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHSCCCSEEEECSC
T ss_pred -------------cEEEEEECCc--EEEEEEEEEEEEECCE--------eecCeEEEEEEEcccccccccCcccEEecCc
Confidence 8999999998 5899999999999875 6789999999998775444456799999999
Q ss_pred CCCC------hHHHHHhcCCC-CCcEEEeeecC-CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCeEee
Q 009593 252 GEIS------VPSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSSCLK 322 (531)
Q Consensus 252 ~~~S------~~~~L~~~g~i-~~~FS~~L~~~-~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~~ 322 (531)
..++ +..+|+++|+| +++||+||.++ ..|.|+||++|+.++ +.+.|+|+... .+|.|++++|.|+++.+.
T Consensus 125 ~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~~~~~~ 203 (320)
T 4aa9_A 125 PSLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ-QYWQFTVDSVTINGVAVA 203 (320)
T ss_dssp GGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB-TTBEEEECEEEETTEEEE
T ss_pred ccccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC-CceEEEEeEEEECCEEec
Confidence 8654 56789999999 79999999985 689999999999885 58888888765 899999999999999876
Q ss_pred c-CcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCCeE
Q 009593 323 Q-TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVF 401 (531)
Q Consensus 323 ~-~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~~y 401 (531)
. ....+||||||++++||+++|++|.+++.. ...... .|.++|.....+|+|+|+| +|.++.|++++|
T Consensus 204 ~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~----~~~~~g------~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y 272 (320)
T 4aa9_A 204 CVGGCQAILDTGTSVLFGPSSDILKIQMAIGA----TENRYG------EFDVNCGNLRSMPTVVFEI-NGRDYPLSPSAY 272 (320)
T ss_dssp STTCEEEEECTTCSSEEEEHHHHHHHHHHTTC----EECTTS------CEEECGGGGGGCCCEEEEE-TTEEEEECHHHH
T ss_pred cCCCcEEEEECCCCcEECCHHHHHHHHHHhCC----cccCCC------cEEEeCCCCCcCceEEEEE-CCEEEEECHHHh
Confidence 3 467899999999999999998888776633 222112 2778887777899999999 899999999999
Q ss_pred EEEeccccceEEE-EEEecC-CCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 402 VIYGTQVVTGFCL-AIQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 402 ~~~~~~~~~~~Cl-~i~~~~-~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
+.+. ...|+ +++... ++.||||+.|||++|+|||++++|||||+++
T Consensus 273 ~~~~----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 273 TSKD----QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EEEE----TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccCC----CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 9763 45897 576643 3579999999999999999999999999974
No 14
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2e-55 Score=464.34 Aligned_cols=309 Identities=20% Similarity=0.324 Sum_probs=253.7
Q ss_pred CceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCC
Q 009593 90 SKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSH 169 (531)
Q Consensus 90 ~~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 169 (531)
...+++.|+.+.+|+++|.||||+|+|.|++||||+++||+|. .|....|. .++.|||++|+||+...
T Consensus 127 ~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~--~C~~~~C~-------~~~~ydps~SsT~~~~~--- 194 (453)
T 2bju_A 127 NDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV--KCTTAGCL-------TKHLYDSSKSRTYEKDG--- 194 (453)
T ss_dssp SEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSTTGG-------GSCCBCGGGCTTCEEEE---
T ss_pred CCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc--CCCccccC-------CCCcCCCccCCceeECC---
Confidence 3457888888999999999999999999999999999999995 44333332 34799999999999854
Q ss_pred CCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEecc--CCCCCCCCCCeee
Q 009593 170 RLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQS--GGYLDGVAPDGLI 247 (531)
Q Consensus 170 ~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~--g~~~~~~~~dGIl 247 (531)
|.|.+.|++| +++|.+++|+|+|++. ... +.|||++.+. +..+.....||||
T Consensus 195 ---------------~~~~i~YgdG--s~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~~~g~~f~~~~~dGIl 248 (453)
T 2bju_A 195 ---------------TKVEMNYVSG--TVSGFFSKDLVTVGNL--------SLP-YKFIEVIDTNGFEPTYTASTFDGIL 248 (453)
T ss_dssp ---------------EEEEEECSSS--EEEEEEEEEEEEETTE--------EEE-EEEEEEEECGGGTTHHHHSSCCEEE
T ss_pred ---------------cEEEEEcCCC--CeEEEEEEEEEEEeCc--------EEE-EEEEEEEEecccCccccccCCceeE
Confidence 8999999998 4899999999999875 566 9999999987 6544334679999
Q ss_pred ecCCCCCC------hHHHHHhcCCC-CCcEEEeeecC--CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeC
Q 009593 248 GLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIG 317 (531)
Q Consensus 248 GLG~~~~S------~~~~L~~~g~i-~~~FS~~L~~~--~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vg 317 (531)
|||++.++ +..+|+++|+| +++||+||++. ..|.|+|||+|+.++ +.+.|+|+... .+|.|.++ |.||
T Consensus 249 GLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~-~~w~V~l~-I~Vg 326 (453)
T 2bju_A 249 GLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD-LYWQITLD-AHVG 326 (453)
T ss_dssp ECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE-TTEEEEEE-EEET
T ss_pred eccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC-ceEEEEEE-EEEC
Confidence 99998765 45779999999 79999999985 579999999999875 47777777554 79999999 9999
Q ss_pred CeEeecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEc
Q 009593 318 SSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVN 397 (531)
Q Consensus 318 g~~~~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~ 397 (531)
|+. . ....+||||||++++||+++|++|.+++ +......+ .+|.++|.. ..+|+|+|+| +|.+++|+
T Consensus 327 g~~-~-~~~~aIiDSGTsl~~lP~~~~~~l~~~i----~~~~~~~g-----~~~~v~C~~-~~~P~itf~f-gg~~~~l~ 393 (453)
T 2bju_A 327 NIM-L-EKANCIVDSGTSAITVPTDFLNKMLQNL----DVIKVPFL-----PFYVTLCNN-SKLPTFEFTS-ENGKYTLE 393 (453)
T ss_dssp TEE-E-EEEEEEECTTCCSEEECHHHHHHHTTTS----SCEECTTS-----SCEEEETTC-TTCCCEEEEC-SSCEEEEC
T ss_pred cEE-e-ccccEEEcCCCCeEecCHHHHHHHHHHh----CCcccCCC-----ceEEEecCC-CCCCcEEEEE-CCEEEEEC
Confidence 943 3 5678999999999999999987776554 33221111 136677765 6899999999 88999999
Q ss_pred CCeEEEEeccccceEEE-EEEecC--CCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 398 NPVFVIYGTQVVTGFCL-AIQPVD--GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 398 ~~~y~~~~~~~~~~~Cl-~i~~~~--~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
+++|+++........|+ +++..+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 394 ~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 394 PEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp HHHHEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HHHhEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999987532256897 677765 3589999999999999999999999999974
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.3e-55 Score=448.93 Aligned_cols=305 Identities=22% Similarity=0.416 Sum_probs=254.8
Q ss_pred eecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCC
Q 009593 93 MSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLC 172 (531)
Q Consensus 93 ~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C 172 (531)
++|. +.+.+|+++|.||||+|+|.|++||||+++||+|. .|....|. .++.|||++|+|++...
T Consensus 5 ~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~~------ 68 (329)
T 1htr_B 5 EPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV--YCQSQACT-------SHSRFNPSESSTYSTNG------ 68 (329)
T ss_dssp CGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHHHH-------TSCCBCGGGCTTCEEEE------
T ss_pred eeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC--CCCCcccC-------CCCcCCCccCCCeEECC------
Confidence 5666 77889999999999999999999999999999995 44322232 24799999999999854
Q ss_pred CCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCCC
Q 009593 173 DLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLG 252 (531)
Q Consensus 173 ~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~ 252 (531)
|.|.+.|++| ++.|.+++|+|+|++. ...++.|||++.+.+..+.....|||||||+.
T Consensus 69 ------------~~~~i~Yg~g--s~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 126 (329)
T 1htr_B 69 ------------QTFSLQYGSG--SLTGFFGYDTLTVQSI--------QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYP 126 (329)
T ss_dssp ------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEESSCSSGGGGGCSCCEEEECCCC
T ss_pred ------------cEEEEEeCCC--CeEEEEEeeeEEEcce--------EECceEEEEEEEccccccccCCCceEEecCCC
Confidence 8999999998 5699999999999865 67799999999887755544567999999998
Q ss_pred CCC------hHHHHHhcCCC-CCcEEEeeecCC---CCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCeEe
Q 009593 253 EIS------VPSLLAKAGLI-RNSFSMCFDKDD---SGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSSCL 321 (531)
Q Consensus 253 ~~S------~~~~L~~~g~i-~~~FS~~L~~~~---~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~ 321 (531)
.++ +..+|+++|+| +++||+||++.. .|.|+||++|+.++ +.+.|+|+... .+|.|+|++|.|+++.+
T Consensus 127 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~ 205 (329)
T 1htr_B 127 ALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE-LYWQIGIEEFLIGGQAS 205 (329)
T ss_dssp SCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS-SSCEEEECEEEETTEEC
T ss_pred cccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC-ceEEEEEeEEEECCcee
Confidence 765 46779999999 799999999863 79999999999875 57888888765 89999999999999876
Q ss_pred e--cCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCC
Q 009593 322 K--QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNP 399 (531)
Q Consensus 322 ~--~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~ 399 (531)
. .....+||||||++++||+++|++|.+++.... ...+. |.++|..+..+|+|+|+| +|.+++|+++
T Consensus 206 ~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~----~~~g~------~~~~C~~~~~~P~i~f~f-~g~~~~i~~~ 274 (329)
T 1htr_B 206 GWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQE----DEYGQ------FLVNCNSIQNLPSLTFII-NGVEFPLPPS 274 (329)
T ss_dssp CTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE----CTTSC------EEECGGGGGGSCCEEEEE-TTEEEEECHH
T ss_pred eecCCCceEEEecCCccEECCHHHHHHHHHHhCCee----cCCCe------EEEeCCCcccCCcEEEEE-CCEEEEECHH
Confidence 4 356789999999999999999999988775432 11121 556776666899999999 8899999999
Q ss_pred eEEEEeccccceEEE-EEEecC-----CC-ceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 400 VFVIYGTQVVTGFCL-AIQPVD-----GD-IGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 400 ~y~~~~~~~~~~~Cl-~i~~~~-----~~-~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
+|+++.. + .|+ +++..+ ++ .||||+.|||++|+|||++++|||||+++
T Consensus 275 ~y~~~~~---g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 275 SYILSNN---G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp HHEEECS---S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HhcccCC---C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 9998764 2 897 676542 34 79999999999999999999999999863
No 16
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.7e-55 Score=452.06 Aligned_cols=313 Identities=23% Similarity=0.387 Sum_probs=260.9
Q ss_pred CCceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccC
Q 009593 89 GSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSC 167 (531)
Q Consensus 89 ~~~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C 167 (531)
+...++|.|+.+.+||++|.||||+|+|.|++||||+++||+|. |..| ...|. .++.|+|++|+|++..
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~-~~~C~-------~~~~y~~~~SsT~~~~-- 75 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRL-YTACV-------YHKLFDASDSSSYKHN-- 75 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTT-CHHHH-------TSCCBCGGGCTTCEEE--
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCC-CCccc-------CCCCCCCCcCcCeeEC--
Confidence 44578899999999999999999999999999999999999995 5522 11222 3479999999999984
Q ss_pred CCCCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeee
Q 009593 168 SHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLI 247 (531)
Q Consensus 168 ~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIl 247 (531)
+|.|.+.|++| +++|.+++|+|+|++. .. ++.|||++...+..+.....||||
T Consensus 76 ----------------~~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v-~~~fg~~~~~~~~~~~~~~~~Gil 128 (341)
T 3k1w_A 76 ----------------GTELTLRYSTG--TVSGFLSQDIITVGGI--------TV-TQMFGEVTEMPALPFMLAEFDGVV 128 (341)
T ss_dssp ----------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EE-EEEEEEEEECCHHHHTTCSSSEEE
T ss_pred ----------------CCEEEEEECCc--EEEEEEEEEEEEECCc--------ee-eEEEEEEEEccccccccCCcceEE
Confidence 48999999997 5899999999999875 55 999999999876533344679999
Q ss_pred ecCCCCCC------hHHHHHhcCCC-CCcEEEeeecCC------CCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeE
Q 009593 248 GLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD------SGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVET 313 (531)
Q Consensus 248 GLG~~~~S------~~~~L~~~g~i-~~~FS~~L~~~~------~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~ 313 (531)
|||+..++ ++.+|+++|+| +++||+||++.. .|.|+||++|+.++ +.+.|+++... .+|.|.+++
T Consensus 129 GLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~ 207 (341)
T 3k1w_A 129 GMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT-GVWQIQMKG 207 (341)
T ss_dssp ECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST-TSCEEEECC
T ss_pred ECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC-CEEEEEEeE
Confidence 99998775 57789999999 799999998764 79999999999885 58888888765 899999999
Q ss_pred EEeCCeEee-cCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCc
Q 009593 314 CCIGSSCLK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNN 392 (531)
Q Consensus 314 i~Vgg~~~~-~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~ 392 (531)
|.|+++.+. .....+||||||++++||+++|++|.+++... ... .+ |.++|.....+|+|+|+| +|.
T Consensus 208 i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~----~~~-~g------~~~~C~~~~~~p~i~f~f-~g~ 275 (341)
T 3k1w_A 208 VSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK----KRL-FD------YVVKCNEGPTLPDISFHL-GGK 275 (341)
T ss_dssp EEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----ECS-SC------EEEEGGGGGGCCCEEEEE-TTE
T ss_pred EEECCEEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCe----ecC-CC------eEEeCCCCCcCCcEEEEE-CCE
Confidence 999999653 45678999999999999999998888777433 211 11 677787667899999999 799
Q ss_pred EEEEcCCeEEEEeccccceEEE-EEEec-----CCCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 393 SFVVNNPVFVIYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 393 ~~~i~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
++.|++++|+++........|+ ++... .++.||||+.|||++|+|||++++|||||+++
T Consensus 276 ~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 276 EYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp EEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9999999999876432256897 57662 24679999999999999999999999999974
No 17
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=6.1e-55 Score=447.58 Aligned_cols=312 Identities=21% Similarity=0.349 Sum_probs=255.8
Q ss_pred eeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC---CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCC
Q 009593 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD---CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (531)
Q Consensus 92 ~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~---C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~ 168 (531)
.+++.+. +..|+++|.||||+|++.|++||||+++||++. |..|. .| ..++.|+|++|+||+...
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~--~C-------~~~~~y~~~~SsT~~~~~-- 71 (339)
T 3fv3_A 4 SLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV--DC-------KSSGTFTPSSSSSYKNLG-- 71 (339)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC--CT-------TTTCCBCGGGCTTCEEEE--
T ss_pred eeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC--CC-------CCCCcCCCccCcceeeCC--
Confidence 3455554 568999999999999999999999999999953 33221 11 134799999999999865
Q ss_pred CCCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeee
Q 009593 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIG 248 (531)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlG 248 (531)
|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++...+ .+||||
T Consensus 72 ----------------~~~~i~Yg~g-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~-------~~GilG 119 (339)
T 3fv3_A 72 ----------------AAFTIRYGDG-STSQGTWGKDTVTINGV--------SITGQQIADVTQTSV-------DQGILG 119 (339)
T ss_dssp ----------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEESS-------SSCEEE
T ss_pred ----------------ceEEEEECCC-ceEEEEEEEEEEEECCE--------EECceEEEEEEecCC-------CceeEE
Confidence 8999999997 78999999999999875 678999999998763 489999
Q ss_pred cCCCCCC----------------hHHHHHhcCCC-CCcEEEeeecC--CCCcEEECCCCCCCC-eeeeeeecCCCceeEE
Q 009593 249 LGLGEIS----------------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ-QSTSFLASNGKYITYI 308 (531)
Q Consensus 249 LG~~~~S----------------~~~~L~~~g~i-~~~FS~~L~~~--~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~ 308 (531)
||+..++ ++.+|+++|+| +++||+||++. ..|.|+||++|+.++ +.+.|+|+... .+|.
T Consensus 120 Lg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~ 198 (339)
T 3fv3_A 120 IGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS-QALT 198 (339)
T ss_dssp CSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS-SSCE
T ss_pred ecCccccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC-ccEE
Confidence 9998653 68899999999 79999999875 479999999999885 47778887765 6999
Q ss_pred EEeeEEEeCCeEeecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEe
Q 009593 309 IGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMF 388 (531)
Q Consensus 309 V~l~~i~Vgg~~~~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f 388 (531)
|++++|.|+++.+. ....++|||||++++||+++|++|.++|.......... ..-|.++|.. ..+|+|+|+|
T Consensus 199 v~l~~i~v~g~~~~-~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~------~~~~~~~C~~-~~~p~i~f~f 270 (339)
T 3fv3_A 199 ISLASVNLKGSSFS-FGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARD------QYLYFIDCNT-DTSGTTVFNF 270 (339)
T ss_dssp EEEEEEEESSCEEE-EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETT------EEEEEECTTC-CCCSEEEEEE
T ss_pred EEEEEEEECCEeec-CCccEEEeCCCCCEecCHHHHHHHHHHcCCEEcccccc------CceEEEecCC-CCCCcEEEEE
Confidence 99999999999887 34789999999999999999999988886443211001 1126678865 4689999999
Q ss_pred cCCcEEEEcCCeEEEEeccccceEE-EEEEecCCCceeeCccceeceEEEEeCCCCEEEEeeCCCCCCCCCCcccC
Q 009593 389 PQNNSFVVNNPVFVIYGTQVVTGFC-LAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPL 463 (531)
Q Consensus 389 ~gg~~~~i~~~~y~~~~~~~~~~~C-l~i~~~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~~~~~~~~~p~ 463 (531)
.+|.++.|++++|+++.. ...| ++|.. .+.||||+.|||++|+|||++++|||||+++|++ +.++++|
T Consensus 271 ~~g~~~~v~~~~~~~~~~---~~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~--~s~i~~i 339 (339)
T 3fv3_A 271 GNGAKITVPNTEYVYQNG---DGTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTT--DSSISAV 339 (339)
T ss_dssp TTSCEEEEEGGGGEEECS---SSCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS--CCCEEEC
T ss_pred CCCCEEEECHHHheeeCC---CCeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCC--ccceEEC
Confidence 668999999999998754 3468 57777 3579999999999999999999999999999984 4444553
No 18
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.5e-55 Score=448.46 Aligned_cols=306 Identities=20% Similarity=0.291 Sum_probs=248.5
Q ss_pred CCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 009593 97 NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLG 175 (531)
Q Consensus 97 ~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 175 (531)
.+.+.+|+++|.||||+|+|.|++||||+++||+|. |..|. |. .++.|||++|+|++.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~---~~-------~~~~y~~~~SsT~~~~~--------- 71 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSS---AT-------GHAIYTPSKSSTSKKVS--------- 71 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHH---HT-------TSCCBCGGGCTTCEECT---------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccc---cC-------CCCcCCcccCcCceEcC---------
Confidence 455778999999999999999999999999999996 76653 21 34799999999999864
Q ss_pred CCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC
Q 009593 176 TSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS 255 (531)
Q Consensus 176 ~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~~~S 255 (531)
.|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++.+++.+......|||||||+..++
T Consensus 72 --------~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 134 (329)
T 3c9x_A 72 --------GASWSISYGDG-SSSSGDVYTDKVTIGGF--------SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGN 134 (329)
T ss_dssp --------TCBEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGC
T ss_pred --------CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEcceEEEEEEecCccccccCCCceeEEeCccccc
Confidence 48999999997 66899999999999865 67799999999987765443467999999998655
Q ss_pred ---------hHHHHHhcCCCCCcEEEeeecCCCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCeEeecCc
Q 009593 256 ---------VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSSCLKQTS 325 (531)
Q Consensus 256 ---------~~~~L~~~g~i~~~FS~~L~~~~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~~~~~ 325 (531)
+..+|+++ +-+++||+||.++..|.|+||++|+.++ +.+.|+|+.....+|.|+|++|.||++.+....
T Consensus 135 ~~~~~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~ 213 (329)
T 3c9x_A 135 QVRPHPQKTWFSNAASS-LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNRNS 213 (329)
T ss_dssp CCBSSCCCCHHHHHHTT-SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCSCC
T ss_pred ccCCCCCCCHHHHHHHh-cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccCCC
Confidence 35667765 3379999999987789999999998874 477777775444799999999999999887667
Q ss_pred ceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCCeEEEEe
Q 009593 326 FKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYG 405 (531)
Q Consensus 326 ~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~~y~~~~ 405 (531)
+.+||||||++++||+++|++|.++|.. +......+. |.++|. ..+|+|+|+| +|.++.|++++|++..
T Consensus 214 ~~aiiDSGTt~~~lp~~~~~~i~~~i~~---a~~~~~~~~-----~~~~C~--~~~P~i~f~f-~g~~~~ip~~~~~~~~ 282 (329)
T 3c9x_A 214 IDGIADTGTTLLLLDDNVVDAYYANVQS---AQYDNQQEG-----VVFDCD--EDLPSFSFGV-GSSTITIPGDLLNLTP 282 (329)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTCTT---CEEETTTTE-----EEEETT--CCCCCEEEEE-TTEEEEECGGGGEEEE
T ss_pred ceEEEECCCCcEeCCHHHHHHHHHhCCC---cEEcCCCCE-----EEEECC--CCCCcEEEEE-CCEEEEECHHHeeeec
Confidence 8999999999999999998777655422 222111111 556676 4789999999 6899999999998875
Q ss_pred ccccceEEEE-EEecC-CCceeeCccceeceEEEEeCCCCEEEEeeC
Q 009593 406 TQVVTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 450 (531)
Q Consensus 406 ~~~~~~~Cl~-i~~~~-~~~~ILG~~fl~~~yvvFD~e~~riGfa~~ 450 (531)
.......|++ |+..+ .+.||||+.|||++|+|||++|+|||||+.
T Consensus 283 ~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 283 LEEGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp SSTTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred cCCCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 3322468986 66554 368999999999999999999999999973
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.2e-54 Score=450.61 Aligned_cols=307 Identities=20% Similarity=0.360 Sum_probs=255.0
Q ss_pred CceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCC
Q 009593 90 SKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSH 169 (531)
Q Consensus 90 ~~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 169 (531)
...+++.|+.+..|+++|.||||+|+|.|++||||+++||+|. .|....|. .++.|||++|+||+...
T Consensus 51 ~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~~--- 118 (375)
T 1miq_A 51 NDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK--KCNSSGCS-------IKNLYDSSKSKSYEKDG--- 118 (375)
T ss_dssp TBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT--TCCSSGGG-------GSCCBCGGGCTTCEEEE---
T ss_pred cceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC--CCCccccc-------CCCcCCCccCCceEECC---
Confidence 3457888888999999999999999999999999999999995 44333333 24799999999999854
Q ss_pred CCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEe----ccCCCCCCCCCCe
Q 009593 170 RLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMK----QSGGYLDGVAPDG 245 (531)
Q Consensus 170 ~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~----~~g~~~~~~~~dG 245 (531)
|.|.+.|++| +++|.+++|+|+|++. ...+ .|||++. ++ .| .....||
T Consensus 119 ---------------~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~-~Fg~~~~~~~~~~-~f-~~~~~dG 170 (375)
T 1miq_A 119 ---------------TKVDITYGSG--TVKGFFSKDLVTLGHL--------SMPY-KFIEVTDTDDLEP-IY-SSVEFDG 170 (375)
T ss_dssp ---------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEE-EEEEEEECGGGTT-HH-HHSCCCE
T ss_pred ---------------cEEEEEeCCC--eEEEEEEEEEEEEcCc--------eECc-EEEEEEecccccc-cc-ccCCCce
Confidence 8999999998 4899999999999865 5667 9999998 54 22 2236799
Q ss_pred eeecCCCCCC------hHHHHHhcCCC-CCcEEEeeecC--CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEE
Q 009593 246 LIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCC 315 (531)
Q Consensus 246 IlGLG~~~~S------~~~~L~~~g~i-~~~FS~~L~~~--~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~ 315 (531)
|||||++.++ +..+|+++|+| +++||+||.+. ..|.|+||++|+.++ +.+.|+|+... .+|.|.++ |.
T Consensus 171 ilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~-i~ 248 (375)
T 1miq_A 171 ILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD-LYWQIDLD-VH 248 (375)
T ss_dssp EEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS-SSSEEEEE-EE
T ss_pred EEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC-ceEEEEEE-EE
Confidence 9999998765 46779999999 79999999986 379999999999875 58888888765 89999999 99
Q ss_pred eCCeEeecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEE
Q 009593 316 IGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFV 395 (531)
Q Consensus 316 Vgg~~~~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~ 395 (531)
|||+.+ ....+||||||++++||+++|++|.++|.... ....+. |.++|.. ..+|+|+|+| +|.++.
T Consensus 249 v~g~~~--~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~~~~g~-----~~~~C~~-~~~P~i~f~f-~g~~~~ 315 (375)
T 1miq_A 249 FGKQTM--EKANVIVDSGTTTITAPSEFLNKFFANLNVIK----VPFLPF-----YVTTCDN-KEMPTLEFKS-ANNTYT 315 (375)
T ss_dssp ETTEEE--EEEEEEECTTBSSEEECHHHHHHHHHHHTCEE----CTTSSC-----EEEETTC-TTCCCEEEEC-SSCEEE
T ss_pred ECCEEc--ccceEEecCCCccEEcCHHHHHHHHHHhCCcc----cCCCCe-----EEEECCC-CCCCcEEEEE-CCEEEE
Confidence 999988 56789999999999999999999988775432 111111 5566765 6899999999 889999
Q ss_pred EcCCeEEEEeccccceEEE-EEEecCC--CceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 396 VNNPVFVIYGTQVVTGFCL-AIQPVDG--DIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 396 i~~~~y~~~~~~~~~~~Cl-~i~~~~~--~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
|++++|+++........|+ +|+..+. +.||||+.|||++|+|||++++|||||+++
T Consensus 316 l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 316 LEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp ECGGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9999999986532245897 7877653 689999999999999999999999999973
No 20
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=6.3e-55 Score=445.54 Aligned_cols=303 Identities=22% Similarity=0.297 Sum_probs=247.4
Q ss_pred CCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009593 98 DFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGT 176 (531)
Q Consensus 98 ~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 176 (531)
..+..|+++|.||||+|+|.|++||||+++||+|. |..|.. .++.|||++|+||+.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-----------~~~~y~~~~SsT~~~~~---------- 70 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-----------XQTIYTPSKSTTAKLLS---------- 70 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC------------CCCBCGGGCTTCEEEE----------
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-----------ccCccCCccCccceecC----------
Confidence 35778999999999999999999999999999996 766632 23799999999999864
Q ss_pred CCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC-
Q 009593 177 SCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS- 255 (531)
Q Consensus 177 ~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~~~S- 255 (531)
.|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++.+++.+......|||||||+..++
T Consensus 71 -------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 134 (329)
T 1oew_A 71 -------GATWSISYGDG-SSSSGDVYTDTVSVGGL--------TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNT 134 (329)
T ss_dssp -------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCC
T ss_pred -------CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEeeeEEEEEEecCccccccCCCceEEEeccccccc
Confidence 38999999997 56899999999999875 67899999999987765443467999999998665
Q ss_pred --------hHHHHHhcCCC-CCcEEEeeecCCCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCeEeecCc
Q 009593 256 --------VPSLLAKAGLI-RNSFSMCFDKDDSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSSCLKQTS 325 (531)
Q Consensus 256 --------~~~~L~~~g~i-~~~FS~~L~~~~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~~~~~ 325 (531)
+..+|+++ | +++||+||.++..|.|+||++|+.++ +.+.|+|+.....+|.|+|++|.||++.+....
T Consensus 135 ~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~ 212 (329)
T 1oew_A 135 VSPTQQKTFFDNAKAS--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTS 212 (329)
T ss_dssp CBSSCCCCHHHHHTTT--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEEE
T ss_pred cCcCCCCCHHHHHHHh--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCCC
Confidence 35678776 6 79999999987789999999999875 477777775444799999999999998876567
Q ss_pred ceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCCeEEEEe
Q 009593 326 FKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYG 405 (531)
Q Consensus 326 ~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~~y~~~~ 405 (531)
+.+||||||++++||+++|++|.++|.. +......+ -|.++|. ..+|+|+|+| +|.++.|++++|++..
T Consensus 213 ~~aiiDSGTt~~~lP~~~~~~l~~~i~~---a~~~~~~g-----~~~~~C~--~~~P~i~f~f-gg~~~~ip~~~~~~~~ 281 (329)
T 1oew_A 213 IDGIADTGTTLLYLPATVVSAYWAQVSG---AKSSSSVG-----GYVFPCS--ATLPSFTFGV-GSARIVIPGDYIDFGP 281 (329)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTSTT---CEEETTTT-----EEEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEE
T ss_pred ceEEEeCCCCCEECCHHHHHHHHHhCCC---cEEcCCCC-----EEEEECC--CCCCcEEEEE-CCEEEEECHHHeeeee
Confidence 8999999999999999998777655422 22221111 1556776 3789999999 8999999999998875
Q ss_pred ccccceEEEE-EEecC-CCceeeCccceeceEEEEeC-CCCEEEEeeC
Q 009593 406 TQVVTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDR-ENLKLGWSHS 450 (531)
Q Consensus 406 ~~~~~~~Cl~-i~~~~-~~~~ILG~~fl~~~yvvFD~-e~~riGfa~~ 450 (531)
.......|++ ++..+ .+.||||+.|||++|+|||+ +++|||||+.
T Consensus 282 ~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 282 ISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp SSTTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred cCCCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 3222468986 66554 36899999999999999999 9999999974
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.6e-54 Score=444.93 Aligned_cols=320 Identities=22% Similarity=0.352 Sum_probs=256.2
Q ss_pred eeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC---CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCC
Q 009593 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD---CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (531)
Q Consensus 92 ~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~---C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~ 168 (531)
.+++.+. +..|+++|.||||+|+|.|++||||+++||+|. |..|.... ....|..++.|+|++|+|++...
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~---~~~~C~~~~~y~~~~SsT~~~~~-- 77 (342)
T 3pvk_A 4 PVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQ---TADFCKQKGTYDPSGSSASQDLN-- 77 (342)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTC---CTTGGGTTCCBCGGGCTTCEEEE--
T ss_pred ceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCccccccc---ccCCCCCCCcCCCccCcceeecC--
Confidence 3445444 678999999999999999999999999999974 55553211 01123346899999999999865
Q ss_pred CCCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeee
Q 009593 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIG 248 (531)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlG 248 (531)
|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++... ..|||||
T Consensus 78 ----------------~~~~i~Yg~g-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~-------~~~GilG 125 (342)
T 3pvk_A 78 ----------------TPFKIGYGDG-SSSQGTLYKDTVGFGGV--------SIKNQVLADVDSTS-------IDQGILG 125 (342)
T ss_dssp ----------------EEEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEE
T ss_pred ----------------CeEEEEecCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEccC-------CCccEEE
Confidence 8999999997 67999999999999875 67899999998764 4589999
Q ss_pred cCCCC-------CChHHHHHhcCCC-CCcEEEeeecC--CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeC
Q 009593 249 LGLGE-------ISVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIG 317 (531)
Q Consensus 249 LG~~~-------~S~~~~L~~~g~i-~~~FS~~L~~~--~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vg 317 (531)
||+.. .+++.+|+++|+| +++||+||++. ..|.|+||++|+.++ +.+.|+|+... .+|.|+|++|.|+
T Consensus 126 Lg~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~ 204 (342)
T 3pvk_A 126 VGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD-RELRISLGSVEVS 204 (342)
T ss_dssp CSCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS-SSCEEEEEEEEET
T ss_pred ecCccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc-ceEEEEEeEEEEC
Confidence 99987 3678999999999 79999999874 469999999999885 47788887765 6999999999999
Q ss_pred CeEeecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEc
Q 009593 318 SSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVN 397 (531)
Q Consensus 318 g~~~~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~ 397 (531)
++.+......+||||||++++||+++|++|.++|....... .. ...+|.++|. ..|+|+|+|.+|.++.|+
T Consensus 205 g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~----~~--~~~~~~~~C~---~~p~i~f~f~~g~~~~vp 275 (342)
T 3pvk_A 205 GKTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD----SN--GNSFYEVDCN---LSGDVVFNFSKNAKISVP 275 (342)
T ss_dssp TEEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC----TT--SCEEEEECSC---CCSEEEEEESTTCEEEEE
T ss_pred CEEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc----CC--CceEEEEecC---CCCceEEEECCCCEEEEc
Confidence 99987656889999999999999999888877775433211 11 1234778887 359999999668899999
Q ss_pred CCeEEEEecc--c-cceEEE-EEEecCCCceeeCccceeceEEEEeCCCCEEEEeeCCCCCCCCCCcccC
Q 009593 398 NPVFVIYGTQ--V-VTGFCL-AIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPL 463 (531)
Q Consensus 398 ~~~y~~~~~~--~-~~~~Cl-~i~~~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~~~~~~~~~p~ 463 (531)
+++|+++... + ....|+ ++... +.||||+.|||++|+|||++++|||||+++|++ +.+++++
T Consensus 276 ~~~~~~~~~~~~g~~~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~--~s~iv~i 341 (342)
T 3pvk_A 276 ASEFAASLQGDDGQPYDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQVKYTS--ASSISAL 341 (342)
T ss_dssp GGGGEEC----------CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS--CCCEEEC
T ss_pred HHHheeeccccCCCcCCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC--CCCEEEe
Confidence 9999987321 1 125796 45543 579999999999999999999999999999984 3455654
No 22
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.4e-54 Score=460.58 Aligned_cols=322 Identities=23% Similarity=0.381 Sum_probs=257.9
Q ss_pred CceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCC-CCcccccccCCCCCCCCCCCCCCCCccccCC
Q 009593 90 SKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCA-PLSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (531)
Q Consensus 90 ~~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~-~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~ 168 (531)
...+++.|+.+.+||++|.||||+|+|.|+|||||+++||+|. .|. ...|. .++.|||++|+||+..
T Consensus 41 ~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~--~C~~~~~C~-------~~~~y~~~~SsT~~~~--- 108 (478)
T 1qdm_A 41 GDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA--KCYFSIACY-------LHSRYKAGASSTYKKN--- 108 (478)
T ss_dssp SCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT--TCCSCGGGG-------GSCCBCGGGCTTCBCC---
T ss_pred CceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC--CCCCCcccc-------CCCCCCcccCCCeeeC---
Confidence 4568899998999999999999999999999999999999995 343 11222 3479999999999983
Q ss_pred CCCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeee
Q 009593 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIG 248 (531)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlG 248 (531)
+|.|.+.|++| +++|.+++|+|+|++. ...++.|||++.+.+..+....+|||||
T Consensus 109 ---------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~f~~~~~dGIlG 163 (478)
T 1qdm_A 109 ---------------GKPAAIQYGTG--SIAGYFSEDSVTVGDL--------VVKDQEFIEATKEPGITFLVAKFDGILG 163 (478)
T ss_dssp ---------------CCEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCBSHHHHCSSSEEEE
T ss_pred ---------------CcEEEEEcCCC--CeEEEEEEEEEEECCe--------EECCEEEEEEEecCCcccccccccceec
Confidence 48999999998 5899999999999875 6779999999987764333346799999
Q ss_pred cCCCCCCh------HHHHHhcCCC-CCcEEEeeecC----CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEe
Q 009593 249 LGLGEISV------PSLLAKAGLI-RNSFSMCFDKD----DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCI 316 (531)
Q Consensus 249 LG~~~~S~------~~~L~~~g~i-~~~FS~~L~~~----~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~V 316 (531)
||+..++. ..+|+++|+| +++||+||.++ ..|.|+||++|+.++ +.+.|+|+... .+|.|+|++|.|
T Consensus 164 Lg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~-~~w~v~l~~i~v 242 (478)
T 1qdm_A 164 LGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK-GYWQFDMGDVLV 242 (478)
T ss_dssp CSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE-TTEEEEECCEEE
T ss_pred ccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC-CeEEEEEeEEEE
Confidence 99998774 4569999999 79999999875 479999999999885 47778777654 799999999999
Q ss_pred CCeEee--cCcceEEEecCccceeccHHHHHHHHHHHHhhc----------------------------------cCccc
Q 009593 317 GSSCLK--QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQV----------------------------------NDTIT 360 (531)
Q Consensus 317 gg~~~~--~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~----------------------------------~~~~~ 360 (531)
|++.+. .....+||||||++++||+++|++|.++|.... +.-..
T Consensus 243 ~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~ 322 (478)
T 1qdm_A 243 GGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTF 322 (478)
T ss_dssp TTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC--
T ss_pred CCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhcccccccc
Confidence 998865 246789999999999999999999988874321 00000
Q ss_pred c-------------cC--------------------------------------CCCceee---------eecCCCCCCC
Q 009593 361 S-------------FE--------------------------------------GYPWKCC---------YKSSSQRLPK 380 (531)
Q Consensus 361 ~-------------~~--------------------------------------~~~~~~C---------y~~~~~~~~~ 380 (531)
. .+ ....+.| |.++|+.+..
T Consensus 323 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~ 402 (478)
T 1qdm_A 323 DGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGS 402 (478)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTT
T ss_pred CccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccc
Confidence 0 00 0001122 5567777778
Q ss_pred CCeEEEEecCCcEEEEcCCeEEEEeccccceEEEE-EEec-----CCCceeeCccceeceEEEEeCCCCEEEEeeC
Q 009593 381 LPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLA-IQPV-----DGDIGTIGQNFMTGYRVVFDRENLKLGWSHS 450 (531)
Q Consensus 381 ~P~itf~f~gg~~~~i~~~~y~~~~~~~~~~~Cl~-i~~~-----~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~ 450 (531)
+|+|+|+| +|++|.|+|++|+++..++....|++ |... .++.||||+.||+++|+|||++|+|||||++
T Consensus 403 lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 403 MPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp CCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 99999999 88999999999999875533468975 5543 2367999999999999999999999999986
No 23
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.7e-54 Score=451.62 Aligned_cols=329 Identities=22% Similarity=0.316 Sum_probs=261.4
Q ss_pred ecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCC
Q 009593 94 SLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLC 172 (531)
Q Consensus 94 ~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C 172 (531)
+|.+..+..||++|.||||+|+|.|+|||||+++||+|. |..| ++.|||++|+||+...
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~f~~~~SsT~~~~~------ 65 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI--------------DTYFDTERSSTYRSKG------ 65 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB--------------SCCCCGGGCTTCEEEE------
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc--------------ccCcccccCccceeCC------
Confidence 345566778999999999999999999999999999995 5444 2689999999999864
Q ss_pred CCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCCC
Q 009593 173 DLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLG 252 (531)
Q Consensus 173 ~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~ 252 (531)
|.|.+.|++| +++|.+++|+|+|++.. .....+.|+|.....+.+......|||||||+.
T Consensus 66 ------------~~~~i~Yg~G--s~~G~~~~Dtv~i~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~ 125 (383)
T 2ewy_A 66 ------------FDVTVKYTQG--SWTGFVGEDLVTIPKGF------NTSFLVNIATIFESENFFLPGIKWNGILGLAYA 125 (383)
T ss_dssp ------------EEEEEECSSC--EEEEEEEEEEEEETTTE------EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCG
T ss_pred ------------ceEEEEECCc--EEEEEEEEEEEEECCCc------cceeEEEEEEEEeecceeeccCcCceEEecCch
Confidence 8999999998 57999999999998531 122357789987766655444567999999998
Q ss_pred CCCh--------HHHHHhcCCCCCcEEEeeec---------CCCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEE
Q 009593 253 EISV--------PSLLAKAGLIRNSFSMCFDK---------DDSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETC 314 (531)
Q Consensus 253 ~~S~--------~~~L~~~g~i~~~FS~~L~~---------~~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i 314 (531)
.++. ..+|++|+.++++||+||++ ...|.|+||++|+.++ +.+.|+|+... .+|.|.|++|
T Consensus 126 ~~s~~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i 204 (383)
T 2ewy_A 126 TLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE-WYYQIEILKL 204 (383)
T ss_dssp GGCSSCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB-TTBBCCEEEE
T ss_pred hcccccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC-ceEEEEEEEE
Confidence 7653 45788888888899999963 2579999999998874 47888888765 7999999999
Q ss_pred EeCCeEeec--C---cceEEEecCccceeccHHHHHHHHHHHHhhccCcccccC--CCCceeeeecCCCCCCCCCeEEEE
Q 009593 315 CIGSSCLKQ--T---SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSVKLM 387 (531)
Q Consensus 315 ~Vgg~~~~~--~---~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~itf~ 387 (531)
.||++.+.. . ...+||||||++++||+++|++|.++|............ ......|+..+...+..+|+|+|+
T Consensus 205 ~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~ 284 (383)
T 2ewy_A 205 EIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIY 284 (383)
T ss_dssp EETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEE
T ss_pred EECCEEccccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEE
Confidence 999998752 1 357999999999999999999999999876543221110 123467887655444579999999
Q ss_pred ecCC-----cEEEEcCCeEEEEecc-ccceEEEE--EEecCCCceeeCccceeceEEEEeCCCCEEEEeeCCCCCCCCCC
Q 009593 388 FPQN-----NSFVVNNPVFVIYGTQ-VVTGFCLA--IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGT 459 (531)
Q Consensus 388 f~gg-----~~~~i~~~~y~~~~~~-~~~~~Cl~--i~~~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~~~~~~~ 459 (531)
|.++ .++.|++++|+.+... +.+..|++ +.+.+ +.||||+.|||++|+|||++++|||||+++|...++.+
T Consensus 285 f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~~-~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~ 363 (383)
T 2ewy_A 285 LRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPST-NALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAGAA 363 (383)
T ss_dssp EECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEES-SCEEECHHHHTTEEEEEETTTTEEEEEECTTCBSSSCB
T ss_pred ECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCCC-CcEEEChHHhCCeeEEEECCCCeEEEEeccCCCcCCcc
Confidence 9554 2799999999987632 12457975 44443 57999999999999999999999999999999877777
Q ss_pred cccCC
Q 009593 460 KSPLT 464 (531)
Q Consensus 460 ~~p~~ 464 (531)
++++.
T Consensus 364 i~~i~ 368 (383)
T 2ewy_A 364 VSEIS 368 (383)
T ss_dssp CEEEE
T ss_pred eeeec
Confidence 77773
No 24
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=5.8e-54 Score=449.28 Aligned_cols=324 Identities=20% Similarity=0.247 Sum_probs=258.0
Q ss_pred CCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 009593 97 NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLG 175 (531)
Q Consensus 97 ~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 175 (531)
+..+..||++|.||||+|+|.|+|||||+++||+|. |..| ++.|||++|+||+...
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~y~~~~SsT~~~~~--------- 73 (395)
T 2qp8_A 17 GKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL--------------HRYYQRQLSSTYRDLR--------- 73 (395)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC--------------SCCCCGGGCTTCEEEE---------
T ss_pred CCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc--------------cCCcCcccCCCceeCC---------
Confidence 344678999999999999999999999999999995 5433 2689999999999864
Q ss_pred CCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEec-CCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCCCCC
Q 009593 176 TSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLIS-GGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI 254 (531)
Q Consensus 176 ~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~-~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~~~ 254 (531)
|.|.+.|++| +++|.+++|+|+|++ . .....+.|+|.....+.|......|||||||+..+
T Consensus 74 ---------~~~~i~Yg~G--s~~G~~~~Dtv~ig~g~-------~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~ 135 (395)
T 2qp8_A 74 ---------KGVYVPYTQG--KWEGELGTDLVSIPHGP-------NVTVRANIAAITESDKFFINGSNWEGILGLAYAEI 135 (395)
T ss_dssp ---------EEEEEECSSC--EEEEEEEEEEEECTTSC-------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGG
T ss_pred ---------ceEEEEECCc--EEEEEEEeEEEEECCCC-------CceEEEEEEEEEccCcccccccCccceEEcCchhh
Confidence 8999999998 569999999999973 2 12224678888766655543456799999999876
Q ss_pred C--------hHHHHHhcCCCCCcEEEeeec------------CCCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeE
Q 009593 255 S--------VPSLLAKAGLIRNSFSMCFDK------------DDSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVET 313 (531)
Q Consensus 255 S--------~~~~L~~~g~i~~~FS~~L~~------------~~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~ 313 (531)
+ ++.+|++|++|+++||+||++ ...|.|+||++|+.++ +.+.|+|+... .+|.|.|++
T Consensus 136 s~~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~ 214 (395)
T 2qp8_A 136 ARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIVR 214 (395)
T ss_dssp CSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB-TTBBCCEEE
T ss_pred ccCCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC-ceEEEEEEE
Confidence 4 356899999998899999974 2579999999999875 47888888764 799999999
Q ss_pred EEeCCeEeec-----CcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccC--CCCceeeeecCCCCCCCCCeEEE
Q 009593 314 CCIGSSCLKQ-----TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSVKL 386 (531)
Q Consensus 314 i~Vgg~~~~~-----~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~itf 386 (531)
|.||++.+.. ....+||||||++++||+++|++|.++|............ ......|+..+...+..+|+|+|
T Consensus 215 i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f 294 (395)
T 2qp8_A 215 VEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISL 294 (395)
T ss_dssp EEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEE
T ss_pred EEECCEEcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEE
Confidence 9999998752 1357999999999999999999999999876543221100 11235788765444457999999
Q ss_pred EecCCc-----EEEEcCCeEEEEecc--ccceEEE--EEEecCCCceeeCccceeceEEEEeCCCCEEEEeeCCCCCCCC
Q 009593 387 MFPQNN-----SFVVNNPVFVIYGTQ--VVTGFCL--AIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLND 457 (531)
Q Consensus 387 ~f~gg~-----~~~i~~~~y~~~~~~--~~~~~Cl--~i~~~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~~~~~ 457 (531)
+|.|+. ++.|++++|+++... +....|+ ++...+ +.||||+.|||++|+|||++++|||||+++|...++
T Consensus 295 ~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~-~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 373 (395)
T 2qp8_A 295 YLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSS-TGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDE 373 (395)
T ss_dssp EEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEES-SCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCS
T ss_pred EEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCCC-CcEEEChHHhCCeeEEEECCCCEEEEEeccCCCCCC
Confidence 996553 799999999988643 1235896 455443 679999999999999999999999999999998777
Q ss_pred CCcccC
Q 009593 458 GTKSPL 463 (531)
Q Consensus 458 ~~~~p~ 463 (531)
.+++++
T Consensus 374 ~~i~~i 379 (395)
T 2qp8_A 374 FRTAAV 379 (395)
T ss_dssp SCCCEE
T ss_pred Ccccee
Confidence 766666
No 25
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.9e-53 Score=449.69 Aligned_cols=308 Identities=18% Similarity=0.314 Sum_probs=255.6
Q ss_pred CCceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCC
Q 009593 89 GSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (531)
Q Consensus 89 ~~~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~ 168 (531)
....+++.|+.+.+||++|.||||||++.|++||||+++||+|. .|....|. .++.|||++|+|++..
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~--~C~s~~C~-------~~~~ydps~SsT~~~~--- 192 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI--KCTSESCE-------SKNHYDSSKSKTYEKD--- 192 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT--TCCSGGGT-------TSCCBCGGGCTTCEEE---
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC--CCCccccC-------CCCCCCCCCCcccccC---
Confidence 44567899999999999999999999999999999999999995 44333332 3479999999999984
Q ss_pred CCCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEe----ccCCCCCCCCCC
Q 009593 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMK----QSGGYLDGVAPD 244 (531)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~----~~g~~~~~~~~d 244 (531)
+|.|.+.|++| +++|.+++|+|+|++. ... +.|||++. +++ + .....|
T Consensus 193 ---------------~~~f~i~YgdG--s~~G~~~~Dtv~igg~--------~v~-~~Fg~a~~t~~~~~~-f-~~~~~d 244 (451)
T 3qvc_A 193 ---------------DTPVKLTSKAG--TISGIFSKDLVTIGKL--------SVP-YKFIEMTEIVGFEPF-Y-SESDVD 244 (451)
T ss_dssp ---------------EEEEEEECSSE--EEEEEEEEEEEEETTE--------EEE-EEEEEEEEEEECTTH-H-HHSCCC
T ss_pred ---------------CCEEEEEECCC--EEEEEEEEEEEEECCE--------EEE-EEEEEEEeccccCCC-c-cCCCCC
Confidence 48999999998 4999999999999875 566 99999998 665 3 223679
Q ss_pred eeeecCCCCCC------hHHHHHhcCCC-CCcEEEeeecC--CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEE
Q 009593 245 GLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETC 314 (531)
Q Consensus 245 GIlGLG~~~~S------~~~~L~~~g~i-~~~FS~~L~~~--~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i 314 (531)
||||||++.++ ++.+|+++|+| +++||+||++. ..|.|+|||+|+.++ +.+.|+|+... .+|.|.++ |
T Consensus 245 GILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~-~~w~v~l~-I 322 (451)
T 3qvc_A 245 GVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD-LMWQVDLD-V 322 (451)
T ss_dssp EEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST-TSSEEEEE-E
T ss_pred EEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC-CeeEEEEE-E
Confidence 99999998754 57789999999 79999999986 369999999999885 58888888765 89999999 9
Q ss_pred EeCCeEeecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEE
Q 009593 315 CIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSF 394 (531)
Q Consensus 315 ~Vgg~~~~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~ 394 (531)
.||++ ......+||||||++++||++++++|.+++ ++...... .+|.++|. ...+|+|+|+| +|.++
T Consensus 323 ~Vgg~--~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i----~a~~~~~~-----g~y~v~C~-~~~~P~itf~f-gg~~i 389 (451)
T 3qvc_A 323 HFGNV--SSKKANVILDSATSVITVPTEFFNQFVESA----SVFKVPFL-----SLYVTTCG-NTKLPTLEYRS-PNKVY 389 (451)
T ss_dssp EETTE--EEEEEEEEECTTBSSEEECHHHHHHHHTTT----TCEECTTS-----SCEEEETT-CTTCCCEEEEE-TTEEE
T ss_pred EECCc--cCCCceEEEeCCCccccCCHHHHHHHHHHc----CCeecCCC-----CeEEeeCC-cCcCCcEEEEE-CCEEE
Confidence 99998 335678999999999999999977776554 43332211 23778888 77899999999 89999
Q ss_pred EEcCCeEEEEeccccceEEE-EEEecC--CCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 395 VVNNPVFVIYGTQVVTGFCL-AIQPVD--GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 395 ~i~~~~y~~~~~~~~~~~Cl-~i~~~~--~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
+|++++|+.+........|+ +++..+ ++.||||++|||++|+|||++++|||||+++
T Consensus 390 ~lp~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 390 TLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EECHHHHEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEcHHHheeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999999986532246896 577665 4689999999999999999999999999974
No 26
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.1e-53 Score=444.81 Aligned_cols=325 Identities=20% Similarity=0.250 Sum_probs=258.8
Q ss_pred CCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009593 98 DFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGT 176 (531)
Q Consensus 98 ~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 176 (531)
..+..||++|.||||+|+|.|+|||||+++||+|. | |. .++.|+|++|+||+...
T Consensus 25 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~------------~~~~y~~~~SsT~~~~~---------- 80 (402)
T 3vf3_A 25 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF------------LHRYYQRQLSSTYRDLR---------- 80 (402)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT------------CSCCCCGGGCTTCEEEE----------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cc------------ccCCcCcccCcccccCC----------
Confidence 33568999999999999999999999999999995 4 21 23799999999999854
Q ss_pred CCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC-
Q 009593 177 SCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS- 255 (531)
Q Consensus 177 ~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~~~S- 255 (531)
|.|.+.|++| +++|.+++|+|+|++.. .....+.|+|.....+.+.....+|||||||+..++
T Consensus 81 --------~~~~i~Yg~G--s~~G~~~~D~v~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~ 144 (402)
T 3vf3_A 81 --------KGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIAR 144 (402)
T ss_dssp --------EEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCS
T ss_pred --------CEEEEEECcE--EEEEEEEEEEEEECCcc------ccceeeeEEEEEccccccccCCCccceEEcCchhhcc
Confidence 8999999998 57999999999998421 122345688888777666555578999999998654
Q ss_pred -------hHHHHHhcCCCCCcEEEeeec------------CCCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEE
Q 009593 256 -------VPSLLAKAGLIRNSFSMCFDK------------DDSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCC 315 (531)
Q Consensus 256 -------~~~~L~~~g~i~~~FS~~L~~------------~~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~ 315 (531)
++.+|+++++|+++||+||++ ...|.|+||++|+.++ +.+.|+|+... .+|.|.+++|.
T Consensus 145 ~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~ 223 (402)
T 3vf3_A 145 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIVRVE 223 (402)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB-TTBEECEEEEE
T ss_pred cCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC-cEEEEEEeEEE
Confidence 466899999998899999963 2479999999999885 47888888764 89999999999
Q ss_pred eCCeEeec-----CcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccC--CCCceeeeecCCCCCCCCCeEEEEe
Q 009593 316 IGSSCLKQ-----TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSVKLMF 388 (531)
Q Consensus 316 Vgg~~~~~-----~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~itf~f 388 (531)
|+++.+.. ....+||||||++++||+++|++|.++|............ ......|+......+..+|+|+|+|
T Consensus 224 v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f 303 (402)
T 3vf3_A 224 INGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYL 303 (402)
T ss_dssp ETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEE
T ss_pred ECCEEecccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEE
Confidence 99998763 2457999999999999999999999999887542221111 1124678877654455799999999
Q ss_pred cCCc-----EEEEcCCeEEEEeccc--cceEEEE--EEecCCCceeeCccceeceEEEEeCCCCEEEEeeCCCCCCCCCC
Q 009593 389 PQNN-----SFVVNNPVFVIYGTQV--VTGFCLA--IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGT 459 (531)
Q Consensus 389 ~gg~-----~~~i~~~~y~~~~~~~--~~~~Cl~--i~~~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~~~~~~~ 459 (531)
.++. ++.|++++|+++.... ....|++ +... ++.||||+.|||++|+|||++++|||||+++|+..++.+
T Consensus 304 ~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~ 382 (402)
T 3vf3_A 304 MGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFR 382 (402)
T ss_dssp ECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEE-SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBCSSC
T ss_pred ecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccCcccCcc
Confidence 5543 5899999999886542 1258985 3333 367999999999999999999999999999999887776
Q ss_pred cccCC
Q 009593 460 KSPLT 464 (531)
Q Consensus 460 ~~p~~ 464 (531)
++++.
T Consensus 383 i~~i~ 387 (402)
T 3vf3_A 383 TAAVE 387 (402)
T ss_dssp BCEEE
T ss_pred ccccc
Confidence 66663
No 27
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.8e-53 Score=434.88 Aligned_cols=307 Identities=18% Similarity=0.228 Sum_probs=252.8
Q ss_pred eeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCC
Q 009593 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (531)
Q Consensus 92 ~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~ 171 (531)
.+++.|+.+..|+++|.|| +|+|.|++||||+++||+|. .|....|. +..++.|||++| ||+..
T Consensus 8 ~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~--~C~~~~C~-----~~~~~~y~~~~S-T~~~~------ 71 (330)
T 1yg9_A 8 YKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ--ECVGGACV-----CPNLQKYEKLKP-KYISD------ 71 (330)
T ss_dssp CSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECT--TCCSGGGG-----STTCCCCCCSSC-EEEEE------
T ss_pred EeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC--CCCCccCc-----ccccCccCCCCC-ceEEC------
Confidence 3567788889999999999 99999999999999999995 33322220 013479999999 99884
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCC
Q 009593 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (531)
Q Consensus 172 C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~ 251 (531)
++.|.+.|++| +++|.+++|+|+|++. ...++.|||++.+ +..+.....|||||||+
T Consensus 72 ------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~ 128 (330)
T 1yg9_A 72 ------------GNVQVKFFDTG--SAVGRGIEDSLTISQL--------TTSQQDIVLADEL-SQEVCILSADVVVGIAA 128 (330)
T ss_dssp ------------EEEEEEETTTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEE-CTHHHHTTCSEEEECSC
T ss_pred ------------CCEEEEEECCc--eEEEEEEEEEEEECCE--------EEcCeEEEEEEEc-ccccccccCceEEEcCc
Confidence 38999999998 5699999999999875 6779999999988 43222336799999999
Q ss_pred CCCC-------hHHHHHhcCCCCCcEEEeeecC--C--CCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCe
Q 009593 252 GEIS-------VPSLLAKAGLIRNSFSMCFDKD--D--SGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSS 319 (531)
Q Consensus 252 ~~~S-------~~~~L~~~g~i~~~FS~~L~~~--~--~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~ 319 (531)
+.++ ++.+|+++|+|+++||+||++. . .|.|+||++|+.++ +.+.|+|+... .+|.|+|++|.|+++
T Consensus 129 ~~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~~~ 207 (330)
T 1yg9_A 129 PGCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD-DSWKFRLDGVKIGDT 207 (330)
T ss_dssp TTSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT-TSCCEECSEEEETTE
T ss_pred chhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC-CEEEEEeCeEEECCE
Confidence 9877 5778999998899999999875 2 69999999999885 48888888754 899999999999999
Q ss_pred EeecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeee-ecCCCCCCCCCeEEEEecCCcEEEEcC
Q 009593 320 CLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCY-KSSSQRLPKLPSVKLMFPQNNSFVVNN 398 (531)
Q Consensus 320 ~~~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy-~~~~~~~~~~P~itf~f~gg~~~~i~~ 398 (531)
.+......+||||||++++||+++|++|.++|... ..... .. .| .++|.....+|+|+|+| +|.+++|++
T Consensus 208 ~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~----~~~~g--~~--~~~~~~C~~~~~~p~i~f~f-gg~~~~l~~ 278 (330)
T 1yg9_A 208 TVAPAGTQAIIDTSKAIIVGPKAYVNPINEAIGCV----VEKTT--TR--RICKLDCSKIPSLPDVTFVI-NGRNFNISS 278 (330)
T ss_dssp EEECTTCEEEECTTCSSEEEEHHHHHHHHHHHTCE----EEECS--SC--EEEEECGGGGGGSCCEEEEE-TTEEEEECH
T ss_pred EEcCCCcEEEEecCCccccCCHHHHHHHHHHhCCc----ccCCC--ce--EEEEEECCCccccCcEEEEE-CCEEEEECH
Confidence 87656788999999999999999999988877432 21111 11 25 77887667899999999 899999999
Q ss_pred CeEEEEeccccceEEE-EEEec-CCCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 399 PVFVIYGTQVVTGFCL-AIQPV-DGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 399 ~~y~~~~~~~~~~~Cl-~i~~~-~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
++|+++. +..|+ +++.. .++.||||+.|||++|+|||++|+|||||+++
T Consensus 279 ~~y~~~~----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 279 QYYIQQN----GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp HHHEEEE----TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhcccC----CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 9999876 34797 56654 34679999999999999999999999999873
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=9.7e-53 Score=447.64 Aligned_cols=327 Identities=20% Similarity=0.244 Sum_probs=262.2
Q ss_pred CCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 009593 97 NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLG 175 (531)
Q Consensus 97 ~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 175 (531)
+..+..||++|.||||+|+|.|+|||||+++||+|. | |. .++.|+|++|+||+...
T Consensus 70 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~------------~~~~y~~~~SsT~~~~~--------- 126 (455)
T 3lpj_A 70 GKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF------------LHRYYQRQLSSTYRDLR--------- 126 (455)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT------------CSCCCCGGGCTTCEEEE---------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cc------------cCCcccCCCCCCcccCC---------
Confidence 345678999999999999999999999999999996 4 32 23799999999999864
Q ss_pred CCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC
Q 009593 176 TSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS 255 (531)
Q Consensus 176 ~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~~~S 255 (531)
|.|.+.|++| +++|.+++|+|+|++.. .....+.|+|+....+.+.....+|||||||+..++
T Consensus 127 ---------~~~~i~Yg~G--s~~G~~~~Dtv~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s 189 (455)
T 3lpj_A 127 ---------KGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIA 189 (455)
T ss_dssp ---------EEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGC
T ss_pred ---------ccEEEEeCCe--EEEEEEEEEEEEECCCc------ceeeEEEEEEEEccCcccccCCCcceEEEeCccccc
Confidence 8999999998 56999999999998521 122356799998887766555578999999998654
Q ss_pred --------hHHHHHhcCCCCCcEEEeeec------------CCCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEE
Q 009593 256 --------VPSLLAKAGLIRNSFSMCFDK------------DDSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETC 314 (531)
Q Consensus 256 --------~~~~L~~~g~i~~~FS~~L~~------------~~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i 314 (531)
++.+|+++++|+++||+||++ ...|.|+||++|+.++ +.+.|+|+... .+|.|.+++|
T Consensus 190 ~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i 268 (455)
T 3lpj_A 190 RPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIVRV 268 (455)
T ss_dssp SSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB-TTBBCCEEEE
T ss_pred cccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC-ceeEEEEeEE
Confidence 456799999998899999973 3579999999999885 57888888765 8999999999
Q ss_pred EeCCeEeec-----CcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccC--CCCceeeeecCCCCCCCCCeEEEE
Q 009593 315 CIGSSCLKQ-----TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSVKLM 387 (531)
Q Consensus 315 ~Vgg~~~~~-----~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~itf~ 387 (531)
.||++.+.. ....+||||||++++||+++|++|.++|............ ......|+......+..+|+|+|+
T Consensus 269 ~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~ 348 (455)
T 3lpj_A 269 EINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLY 348 (455)
T ss_dssp EETTEECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEE
T ss_pred EECCEEccccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEE
Confidence 999998763 2457999999999999999999999999887543221111 123467887665445569999999
Q ss_pred ecCCc-----EEEEcCCeEEEEecccc--ceEEEEEEe-cCCCceeeCccceeceEEEEeCCCCEEEEeeCCCCCCCCCC
Q 009593 388 FPQNN-----SFVVNNPVFVIYGTQVV--TGFCLAIQP-VDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGT 459 (531)
Q Consensus 388 f~gg~-----~~~i~~~~y~~~~~~~~--~~~Cl~i~~-~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~~~~~~~ 459 (531)
|.++. ++.|++++|+++..... ...|+++.. ...+.||||+.|||++|+|||++++|||||+++|...++.+
T Consensus 349 f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~ 428 (455)
T 3lpj_A 349 LMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFR 428 (455)
T ss_dssp EECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSC
T ss_pred EcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccccccccC
Confidence 95543 59999999999865421 258986322 22367999999999999999999999999999999887766
Q ss_pred cccCC
Q 009593 460 KSPLT 464 (531)
Q Consensus 460 ~~p~~ 464 (531)
++.+.
T Consensus 429 i~~i~ 433 (455)
T 3lpj_A 429 TAAVE 433 (455)
T ss_dssp CCEEE
T ss_pred cceec
Confidence 66663
No 29
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=9.1e-53 Score=428.81 Aligned_cols=300 Identities=21% Similarity=0.307 Sum_probs=243.5
Q ss_pred CCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCCCCCCC
Q 009593 99 FGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTS 177 (531)
Q Consensus 99 ~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~ 177 (531)
.+.+|+++|.|| +|+|.|++||||+++||+|. |..|. |. .++.|||++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~---c~-------~~~~y~~~~Ss-~~~------------- 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSE---QT-------GHDLYTPSSSA-TKL------------- 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHH---HT-------TSCCCBCCSSC-EEC-------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccc---cC-------CCCCCCchhcC-Ccc-------------
Confidence 477899999999 99999999999999999996 66553 21 34799999998 543
Q ss_pred CCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC--
Q 009593 178 CQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS-- 255 (531)
Q Consensus 178 C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~~~S-- 255 (531)
++|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++.+++.+......|||||||+..++
T Consensus 66 -----~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 66 -----SGYSWDISYGDG-SSASGDVYRDTVTVGGV--------TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTV 131 (325)
T ss_dssp -----TTCBEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCC
T ss_pred -----CCCEEEEEeCCC-CEEEEEEEEeEEEECCE--------EEcceEEEEEEecCccccccCCCceEEEeCccccccc
Confidence 359999999997 66899999999999865 67899999999987766544577999999998765
Q ss_pred -------hHHHHHhcCCCCCcEEEeeecCCCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCeEeecCcce
Q 009593 256 -------VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFK 327 (531)
Q Consensus 256 -------~~~~L~~~g~i~~~FS~~L~~~~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~~~~~~~ 327 (531)
+..+|+++ +.+++||+||.++..|.|+||++|+.++ +.+.|+|+.....+|.|+|++|.|+++.+....+.
T Consensus 132 ~p~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 210 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSSSGFS 210 (325)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBSCCEE
T ss_pred CcCCCCCHHHHHHHh-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccCCCce
Confidence 35778876 3389999999987789999999999874 47777777544479999999999999888656789
Q ss_pred EEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCCeEEEEecc
Q 009593 328 AIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQ 407 (531)
Q Consensus 328 aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~~y~~~~~~ 407 (531)
+||||||++++||+++|++|.++|.. +......+. |.++|. ..+|+|+|+| +|.++.|++++|++....
T Consensus 211 aiiDSGTt~~~lP~~~~~~i~~~i~~---a~~~~~~g~-----~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~~~~~ 279 (325)
T 1ibq_A 211 AIADTGTTLILLDDEIVSAYYEQVSG---AQESYEAGG-----YVFSCS--TDLPDFTVVI-GDYKAVVPGKYINYAPVS 279 (325)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTSTT---CBCCSSSSS-----CEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEESS
T ss_pred EEEeCCCCcEeCCHHHHHHHHHhCCC---ceEcCcCCe-----EEEEcC--CCCCcEEEEE-CCEEEEECHHHhcccccC
Confidence 99999999999999998887665532 222111111 456676 3789999999 899999999999887533
Q ss_pred ccceEEEE-EEecC-CCceeeCccceeceEEEEeCCCCEEEEeeC
Q 009593 408 VVTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 450 (531)
Q Consensus 408 ~~~~~Cl~-i~~~~-~~~~ILG~~fl~~~yvvFD~e~~riGfa~~ 450 (531)
.....|++ ++..+ .+.||||+.|||++|+|||++++|||||++
T Consensus 280 ~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 324 (325)
T 1ibq_A 280 TGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQ 324 (325)
T ss_dssp TTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeC
Confidence 11468986 66554 368999999999999999999999999986
No 30
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.6e-52 Score=436.10 Aligned_cols=321 Identities=19% Similarity=0.348 Sum_probs=242.4
Q ss_pred eecC-CCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCC
Q 009593 93 MSLG-NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (531)
Q Consensus 93 ~~l~-~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~ 171 (531)
+++. ++.+.+||++|.|||| |+|||||+++||+|. .|. +|+.++|++..
T Consensus 5 ~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~--~~~-----------------------~~~~~~C~s~~ 54 (381)
T 1t6e_X 5 APVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD--GGQ-----------------------PPAEIPCSSPT 54 (381)
T ss_dssp EEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCC--TTC-----------------------CCCCCBTTSHH
T ss_pred EeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCC--CCC-----------------------CCCccCCCCch
Confidence 3444 6778899999999998 999999999999995 121 12334444444
Q ss_pred CCC-----CCCCCC-------CCCCC-ceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccc----eEEEEEEecc
Q 009593 172 CDL-----GTSCQN-------PKQPC-PYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQAS----VIIGCGMKQS 234 (531)
Q Consensus 172 C~~-----~~~C~~-------~~~~c-~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~----~~fG~~~~~~ 234 (531)
|.. ...|.. .++.| .|.+.|++| +.++|.+++|+|+|++.++. ....+ +.|||++.+.
T Consensus 55 C~~~~~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdG-s~~~G~l~~Dtv~ig~~~g~----~~v~~~~~~~~Fg~~~~~~ 129 (381)
T 1t6e_X 55 CLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSG-ACAAGSLSHTRFVANTTDGS----KPVSKVNVGVLAACAPSKL 129 (381)
T ss_dssp HHHHHSSCCTTCCCCCC------CBCEECCBCTTTC-CBCCEEEEEEEEEEEEESSS----SEEEEEEEEEEEEECCGGG
T ss_pred hccccCCCCCCCCCccCCcCcCCCccccccccccCC-ceeeEEEEEEEEEeeccCCC----ccccceeeeeEeecCcccc
Confidence 432 112332 12347 599999997 66799999999999864321 12333 4789998873
Q ss_pred CCCCCCCCCCeeeecCCCCCChHHHHHhcCCCCCcEEEeeecCCCCcEEECCCCCC--C-Ce---eeeeeecCCCceeEE
Q 009593 235 GGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPA--T-QQ---STSFLASNGKYITYI 308 (531)
Q Consensus 235 g~~~~~~~~dGIlGLG~~~~S~~~~L~~~g~i~~~FS~~L~~~~~G~l~fGg~d~~--~-~~---~~~~v~~~~~~~~y~ 308 (531)
+..+ ....|||||||++.+|++.||+++++++++||+||.+...|.|+||+.+.. + .+ ++|++..+.. .+|.
T Consensus 130 ~~~~-~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~ 207 (381)
T 1t6e_X 130 LASL-PRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHY 207 (381)
T ss_dssp GTTS-CTTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCE
T ss_pred cCCC-CCCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCC-cceE
Confidence 2222 246799999999999999999999877999999999877899999998764 1 22 4555433222 4677
Q ss_pred EEeeEEEeCCeEeecC-----cceEEEecCccceeccHHHHHHHHHHHHhhccC--------cccccCCCCceeeeecCC
Q 009593 309 IGVETCCIGSSCLKQT-----SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVND--------TITSFEGYPWKCCYKSSS 375 (531)
Q Consensus 309 V~l~~i~Vgg~~~~~~-----~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~--------~~~~~~~~~~~~Cy~~~~ 375 (531)
|+|++|+||++.+... ..++||||||++++||+++|++|.++|.+++.. .+.......++.||..++
T Consensus 208 v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~ 287 (381)
T 1t6e_X 208 ISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKT 287 (381)
T ss_dssp ECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGG
T ss_pred EEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCC
Confidence 9999999999987532 246999999999999999999999999887642 111012245688998876
Q ss_pred CC----CCCCCeEEEEecCCcEEEEcCCeEEEEeccccceEEEEEEecCC--------CceeeCccceeceEEEEeCCCC
Q 009593 376 QR----LPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDG--------DIGTIGQNFMTGYRVVFDRENL 443 (531)
Q Consensus 376 ~~----~~~~P~itf~f~gg~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~~--------~~~ILG~~fl~~~yvvFD~e~~ 443 (531)
.. ...+|+|+|+|+||++++|++++|+++..+ +.+|++++..+. +.||||+.|||++|+|||++|+
T Consensus 288 ~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~ 365 (381)
T 1t6e_X 288 LGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKK 365 (381)
T ss_dssp CCEETTEECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTT
T ss_pred CcccccCCcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCC
Confidence 32 136899999996679999999999988643 678999887653 5799999999999999999999
Q ss_pred EEEEeeCCC
Q 009593 444 KLGWSHSNC 452 (531)
Q Consensus 444 riGfa~~~C 452 (531)
|||||++..
T Consensus 366 riGfA~~~~ 374 (381)
T 1t6e_X 366 RLGFSRLPH 374 (381)
T ss_dssp EEEEEECCT
T ss_pred EEEEecccC
Confidence 999999864
No 31
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=5e-52 Score=422.93 Aligned_cols=297 Identities=20% Similarity=0.294 Sum_probs=242.9
Q ss_pred CCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCCCCCCC
Q 009593 99 FGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTS 177 (531)
Q Consensus 99 ~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~ 177 (531)
.+.+|+++|.|| +|+|.|++||||+++||+|. |..|. |. .++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~---c~-------~~~~y~~~~Ss-~~~------------- 66 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSE---RS-------GHDYYTPGSSA-QKI------------- 66 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH---HT-------TCCCBCCCTTC-EEE-------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccc---cc-------CCCCCCccccC-Ccc-------------
Confidence 467899999999 89999999999999999996 66552 22 34799999999 553
Q ss_pred CCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCCh-
Q 009593 178 CQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISV- 256 (531)
Q Consensus 178 C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~~~S~- 256 (531)
++|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++.+++.+......|||||||+..++.
T Consensus 67 -----~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 67 -----DGATWSISYGDG-SSASGDVYKDKVTVGGV--------SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCC
T ss_pred -----CCCeEEEEcCCC-CeEEEEEEEEEEEECCE--------EECceEEEEEEeccccccccCCCceEEecCccccccc
Confidence 249999999997 56899999999999865 678999999999877655434679999999986653
Q ss_pred --------HHHHHhcCCCCCcEEEeeecCCCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCeEeecCcce
Q 009593 257 --------PSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFK 327 (531)
Q Consensus 257 --------~~~L~~~g~i~~~FS~~L~~~~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~~~~~~~ 327 (531)
..+|+++ +.+++||+||.++..|.|+||++|+.++ +.+.|+|+.....+|.|++++|.||+ .+....+.
T Consensus 133 ~p~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~~~~~~ 210 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS-LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSSSDSIT 210 (323)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEECCCEE
T ss_pred CCCCCCCHHHHHHHh-ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cccCCCce
Confidence 5678876 3379999999987789999999999885 47888888644579999999999999 66656789
Q ss_pred EEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCCeEEEEecc
Q 009593 328 AIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQ 407 (531)
Q Consensus 328 aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~~y~~~~~~ 407 (531)
+||||||++++||+++|++|.++|.. +......+ .|.++|. ..+|+|+|+| +|.+++|++++|+++...
T Consensus 211 aiiDSGTs~~~lp~~~~~~i~~~i~g---a~~~~~~g-----~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~~~~~ 279 (323)
T 1izd_A 211 GIADTGTTLLLLDDSIVDAYYEQVNG---ASYDSSQG-----GYVFPSS--ASLPDFSVTI-GDYTATVPGEYISFADVG 279 (323)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTSTT---CEEETTTT-----EEEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEECS
T ss_pred EEEeCCCcceeCCHHHHHHHHHhCCC---cEEcCcCC-----EEEEECC--CCCceEEEEE-CCEEEecCHHHeEEecCC
Confidence 99999999999999998777655422 22211111 1666776 4789999999 899999999999887643
Q ss_pred ccceEEEE-EEecC-CCceeeCccceeceEEEEeCCCCEEEEeeC
Q 009593 408 VVTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 450 (531)
Q Consensus 408 ~~~~~Cl~-i~~~~-~~~~ILG~~fl~~~yvvFD~e~~riGfa~~ 450 (531)
+..|++ ++..+ .+.||||+.|||++|+|||++++|||||++
T Consensus 280 --~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 280 --NGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp --TTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred --CCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 568986 76654 368999999999999999999999999986
No 32
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.7e-52 Score=426.43 Aligned_cols=297 Identities=20% Similarity=0.292 Sum_probs=240.9
Q ss_pred CCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCCCCCCC
Q 009593 99 FGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTS 177 (531)
Q Consensus 99 ~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~ 177 (531)
.+..|+++|.|| +|+|.|++||||+++||+|. |..|. |. .++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~---c~-------~~~~y~~~~Ss-~~~------------- 66 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQ---QS-------GHSVYNPSATG-KEL------------- 66 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH---HT-------TSCCBCHHHHC-EEE-------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchh---cc-------CCCCCCcccCC-ccc-------------
Confidence 467899999999 99999999999999999996 66553 22 34799999998 654
Q ss_pred CCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC--
Q 009593 178 CQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS-- 255 (531)
Q Consensus 178 C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~~~S-- 255 (531)
++|.|++.|++| +.++|.+++|+|+|++. ...++.|||++.+++.+......|||||||+..++
T Consensus 67 -----~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 67 -----SGYTWSISYGDG-SSASGNVFTDSVTVGGV--------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCC
T ss_pred -----CCCeEEEEeCCC-CeEEEEEEEEEEEECCE--------EECcEEEEEEEecCcccccCCCCceEEEeCccccccc
Confidence 249999999997 56899999999999875 67899999999987766544577999999998654
Q ss_pred -------hHHHHHhcCCCCCcEEEeeecCCCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCeEeecCcce
Q 009593 256 -------VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFK 327 (531)
Q Consensus 256 -------~~~~L~~~g~i~~~FS~~L~~~~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~~~~~~~ 327 (531)
+..+|+++ +.+++||+||.++..|.|+||++|+.++ +.+.|+|+.....+|.|+|++|.|++ +......
T Consensus 133 ~~~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~~~~~~~ 209 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS-LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--QSGDGFS 209 (323)
T ss_dssp BSSCCCCHHHHHGGG-BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--EEEEEEE
T ss_pred ccCCCCCHHHHHHHh-cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--ccCCCce
Confidence 35678876 3379999999987789999999999874 47777777544479999999999999 4445678
Q ss_pred EEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCCeEEEEecc
Q 009593 328 AIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQ 407 (531)
Q Consensus 328 aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~~y~~~~~~ 407 (531)
+||||||++++||+++|++|.++|.. +......+ -|.++|. ..+|+|+|+| +|.+++|++++|++....
T Consensus 210 aiiDSGTs~~~lP~~~~~~l~~~i~~---a~~~~~~g-----~~~~~C~--~~~P~i~f~f-gg~~~~l~~~~~~~~~~~ 278 (323)
T 1bxo_A 210 GIADTGTTLLLLDDSVVSQYYSQVSG---AQQDSNAG-----GYVFDCS--TNLPDFSVSI-SGYTATVPGSLINYGPSG 278 (323)
T ss_dssp EEECTTCSSEEECHHHHHHHHTTSTT---CEEETTTT-----EEEECTT--CCCCCEEEEE-TTEEEEECHHHHEEEECS
T ss_pred EEEeCCCCceeCCHHHHHHHHHhCCC---ceEcCcCC-----EEEEECC--CCCceEEEEE-CCEEEEECHHHeEEeccC
Confidence 99999999999999998877665532 22211111 1667786 4789999999 899999999999887643
Q ss_pred ccceEEEE-EEecC-CCceeeCccceeceEEEEeCCCCEEEEeeC
Q 009593 408 VVTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 450 (531)
Q Consensus 408 ~~~~~Cl~-i~~~~-~~~~ILG~~fl~~~yvvFD~e~~riGfa~~ 450 (531)
+ ...|++ ++..+ .+.||||+.|||++|+|||++|+|||||++
T Consensus 279 ~-~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 279 D-GSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp S-SSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred C-CCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 2 468986 66654 368999999999999999999999999986
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.7e-51 Score=422.06 Aligned_cols=298 Identities=19% Similarity=0.315 Sum_probs=241.7
Q ss_pred eeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCC
Q 009593 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (531)
Q Consensus 92 ~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~ 171 (531)
.+++.|+ +..|+++|.||||+|+|.|+|||||+++||+|. +.|+|++|+++.
T Consensus 4 ~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-------------------~~y~~s~Ss~~~-------- 55 (340)
T 1wkr_A 4 SVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-------------------KSYVKTSTSSAT-------- 55 (340)
T ss_dssp EEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-------------------SCCCCCTTCEEE--------
T ss_pred cEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-------------------CccCCcCCcccc--------
Confidence 4567776 568999999999999999999999999999982 579998887653
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecCC
Q 009593 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (531)
Q Consensus 172 C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~ 251 (531)
+|.|.+.|++| +++|.+++|+|+|++. .+.++.|||++.+.+ + ...|||||||+
T Consensus 56 ------------~~~~~i~Yg~G--s~~G~~~~Dtv~~g~~--------~v~~~~fg~~~~~~~-~---~~~~GilGLg~ 109 (340)
T 1wkr_A 56 ------------SDKVSVTYGSG--SFSGTEYTDTVTLGSL--------TIPKQSIGVASRDSG-F---DGVDGILGVGP 109 (340)
T ss_dssp ------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEES-C---TTCSEEEECSC
T ss_pred ------------CceEEEEECCc--EEEEEEEEEEEEECCE--------EEcceEEEEEEccCC-C---cCCCcEEECCc
Confidence 38999999998 4899999999999874 678999999999876 3 25799999999
Q ss_pred CCCC--------------hHHHHHhcCCC-CCcEEEeeecC-----CCCcEEECCCCCCCC-eeeeeeecCCC---ceeE
Q 009593 252 GEIS--------------VPSLLAKAGLI-RNSFSMCFDKD-----DSGRIFFGDQGPATQ-QSTSFLASNGK---YITY 307 (531)
Q Consensus 252 ~~~S--------------~~~~L~~~g~i-~~~FS~~L~~~-----~~G~l~fGg~d~~~~-~~~~~v~~~~~---~~~y 307 (531)
..++ ++.+|+++|+| +++||+||.+. ..|.|+||++|+.++ +.+.|+|+... ..+|
T Consensus 110 ~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w 189 (340)
T 1wkr_A 110 VDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYW 189 (340)
T ss_dssp GGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSS
T ss_pred cccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceE
Confidence 8654 35679999999 79999999863 369999999998774 46667776552 4799
Q ss_pred EEEeeEEEeCC-eEeecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEE
Q 009593 308 IIGVETCCIGS-SCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKL 386 (531)
Q Consensus 308 ~V~l~~i~Vgg-~~~~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf 386 (531)
.|. ++|.|++ +.+. ....+||||||++++||+++|++|.+++.... ....+ +|.++|.....+|+|+|
T Consensus 190 ~v~-~~i~v~~~~~l~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~----~~~~g-----~~~~~C~~~~~~p~i~f 258 (340)
T 1wkr_A 190 GIN-QSIRYGSSTSIL-SSTAGIVDTGTTLTLIASDAFAKYKKATGAVA----DNNTG-----LLRLTTAQYANLQSLFF 258 (340)
T ss_dssp EEE-EEEEETTTEEEE-EEEEEEECTTBCSEEECHHHHHHHHHHHTCEE----CTTTS-----SEEECHHHHHTCCCEEE
T ss_pred EEE-eeEEECCCeEcc-CCCeEEEeCCcccccCCHHHHHHHHHhhCCEE----cCCCC-----eEEeeccccccCCcEEE
Confidence 999 9999998 8775 35689999999999999999998877664332 11111 36778865567899999
Q ss_pred EecCCcEEEEcCCeEEEEecc-----ccceEE-EEEEec-----CCCceeeCccceeceEEEEeCCCCEEEEeeCCCCCC
Q 009593 387 MFPQNNSFVVNNPVFVIYGTQ-----VVTGFC-LAIQPV-----DGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDL 455 (531)
Q Consensus 387 ~f~gg~~~~i~~~~y~~~~~~-----~~~~~C-l~i~~~-----~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~~~ 455 (531)
+| +|.++.|++++|+++... +....| +++... .+..||||+.|||++|+|||++++|||||+++|++.
T Consensus 259 ~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 337 (340)
T 1wkr_A 259 TI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTA 337 (340)
T ss_dssp EE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTC
T ss_pred EE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCC
Confidence 99 889999999999876532 112456 456542 124699999999999999999999999999999864
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.3e-42 Score=338.25 Aligned_cols=226 Identities=25% Similarity=0.391 Sum_probs=188.6
Q ss_pred CCceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccC
Q 009593 89 GSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSC 167 (531)
Q Consensus 89 ~~~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C 167 (531)
|+..++|.|+.+.+||++|.||||+|+|.|+|||||+++||+|. |..| ..|. .++.|||++|+||+...
T Consensus 1 ~~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~--~~C~-------~~~~y~~~~SsT~~~~~- 70 (239)
T 1b5f_A 1 GSAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINS--KACR-------AHSMYESSDSSTYKENG- 70 (239)
T ss_dssp CCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSC--HHHH-------TSCCBCGGGCTTCEEEE-
T ss_pred CCceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCC--cccC-------CCCCCCCccCCCeeeCC-
Confidence 34568889999999999999999999999999999999999995 5421 1222 23789999999999854
Q ss_pred CCCCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeee
Q 009593 168 SHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLI 247 (531)
Q Consensus 168 ~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIl 247 (531)
|.|.+.|++| +++|.+++|+|+|++. ...++.|||+..+.+..+....+||||
T Consensus 71 -----------------~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~f~~~~~~Gil 123 (239)
T 1b5f_A 71 -----------------TFGAIIYGTG--SITGFFSQDSVTIGDL--------VVKEQDFIEATDEADNVFLHRLFDGIL 123 (239)
T ss_dssp -----------------EEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTTCSCCEEE
T ss_pred -----------------cEEEEEECCC--cEEEEEEEEEEEECCc--------EEccEEEEEEEeccCccccccCcceEE
Confidence 8999999998 5899999999999865 677999999998765433334679999
Q ss_pred ecCCCCCChH--HHHHhcCCC-CCcEEEeeecC----CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCe
Q 009593 248 GLGLGEISVP--SLLAKAGLI-RNSFSMCFDKD----DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSS 319 (531)
Q Consensus 248 GLG~~~~S~~--~~L~~~g~i-~~~FS~~L~~~----~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~ 319 (531)
|||+..++.| .+|+++|+| +++||+||.+. ..|.|+||++|+.++ +.+.|+|+... .+|.|+|++|.|+++
T Consensus 124 GLg~~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~ 202 (239)
T 1b5f_A 124 GLSFQTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ-YYWQFGIGDVLIGDK 202 (239)
T ss_dssp ECSCCSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE-TTEEEEECCEEETTE
T ss_pred ecCccccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC-CeEEEEeeEEEECCE
Confidence 9999998855 458999999 79999999873 479999999999875 46777777654 799999999999999
Q ss_pred Eee--cCcceEEEecCccceeccHHHHHHHHHHHH
Q 009593 320 CLK--QTSFKAIVDSGSSFTFLPKEVYETIAAEFD 352 (531)
Q Consensus 320 ~~~--~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~ 352 (531)
.+. .....+||||||++++||+++|++|.++|.
T Consensus 203 ~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 203 STGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp ECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred EecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 875 346789999999999999999888876653
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=8.5e-37 Score=297.73 Aligned_cols=220 Identities=21% Similarity=0.366 Sum_probs=182.1
Q ss_pred ccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC------hHHHHHhcCCC-CCcEEEeeecCC----CCcEEECCCC
Q 009593 220 SVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD----SGRIFFGDQG 288 (531)
Q Consensus 220 ~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG~~~~S------~~~~L~~~g~i-~~~FS~~L~~~~----~G~l~fGg~d 288 (531)
..+.++.|||++.+++.++.....|||||||++.++ +..+|+++|+| +++||+||++.. .|.|+||++|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 367899999999998866655678999999998765 45789999999 799999998752 7999999999
Q ss_pred CCCC-eeeeeeecCCCceeEEEEeeEEEeCCeEe-ecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCC
Q 009593 289 PATQ-QSTSFLASNGKYITYIIGVETCCIGSSCL-KQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYP 366 (531)
Q Consensus 289 ~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~-~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~ 366 (531)
+.++ +.+.|+|+... .+|.|++++|.|+++.+ ......+||||||++++||+++|++|.+++... .....
T Consensus 83 ~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~~~g--- 154 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRK-AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAV----PLIQG--- 154 (241)
T ss_dssp GGGEEEEEEEEECSSB-TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----EEETT---
T ss_pred HHHcCCceEEEECccc-cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCe----eccCC---
Confidence 9875 58888888765 89999999999999874 345678999999999999999999888776432 22111
Q ss_pred ceeeeecCCCCCCCCCeEEEEecCCcEEEEcCCeEEEEeccccceEEE-EEEec-----CCCceeeCccceeceEEEEeC
Q 009593 367 WKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVVFDR 440 (531)
Q Consensus 367 ~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~ILG~~fl~~~yvvFD~ 440 (531)
.|.++|.....+|+|+|+| +|.+++|++++|+++........|+ +++.. .++.||||++|||++|+|||+
T Consensus 155 ---~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~ 230 (241)
T 1lya_B 155 ---EYMIPCEKVSTLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDR 230 (241)
T ss_dssp ---EEEEEGGGGGGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEEET
T ss_pred ---cEEEECCCCccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEEEEEC
Confidence 1667776666899999999 8999999999999987542246897 57764 246899999999999999999
Q ss_pred CCCEEEEeeCC
Q 009593 441 ENLKLGWSHSN 451 (531)
Q Consensus 441 e~~riGfa~~~ 451 (531)
+++|||||+++
T Consensus 231 ~~~~igfA~~~ 241 (241)
T 1lya_B 231 DNNRVGFAEAA 241 (241)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCEEEEEEcC
Confidence 99999999863
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.87 E-value=1.4e-22 Score=167.78 Aligned_cols=92 Identities=29% Similarity=0.417 Sum_probs=78.5
Q ss_pred ceeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCC--CcccccccCCCCCCCCCCCCCCCCccccCC
Q 009593 91 KTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAP--LSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (531)
Q Consensus 91 ~~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~--~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~ 168 (531)
..++|.|+.+..||++|.||||+|+|.|+|||||+++||+|. .|.. ..|. .++.|||++|+|++...
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~C~~~~~~C~-------~~~~y~p~~SsT~~~~~-- 71 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI--HCKLLDIACW-------IHHKYNSDKSSTYVKNG-- 71 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCTTCHHHH-------TSCCBCGGGCTTCEEEE--
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc--CccCcccccC-------CCCCCCchhCCCceeCC--
Confidence 457788888999999999999999999999999999999995 3432 1221 34799999999999854
Q ss_pred CCCCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEec
Q 009593 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLIS 211 (531)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~ 211 (531)
|.|.+.|++| ++.|.+++|+|+|++
T Consensus 72 ----------------~~~~i~Yg~G--s~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ----------------TSFDIHYGSG--SLSGYLSQDTVSVPC 96 (97)
T ss_dssp ----------------EEEEEECSSC--EEEEEEEEEEEEESC
T ss_pred ----------------CcEEEEECCc--EEEEEEEEEEEEECC
Confidence 8999999998 489999999999975
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.65 E-value=9e-17 Score=130.40 Aligned_cols=80 Identities=20% Similarity=0.421 Sum_probs=67.8
Q ss_pred eecCCCCCCCCCeEEEEecCCcEEEEcCCeEEEEeccccceEEE-EEEec----CCCceeeCccceeceEEEEeCCCCEE
Q 009593 371 YKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPV----DGDIGTIGQNFMTGYRVVFDRENLKL 445 (531)
Q Consensus 371 y~~~~~~~~~~P~itf~f~gg~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~----~~~~~ILG~~fl~~~yvvFD~e~~ri 445 (531)
|.++|+....+|+|+|+| +|.++.|++++|+++...+....|+ +++.. .++.||||+.|||++|+|||++|+||
T Consensus 3 y~v~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ri 81 (87)
T 1b5f_B 3 LQVDCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLV 81 (87)
T ss_dssp CEECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEE
T ss_pred EEEECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEE
Confidence 678888777899999999 8999999999999986543246897 57663 24589999999999999999999999
Q ss_pred EEeeCC
Q 009593 446 GWSHSN 451 (531)
Q Consensus 446 Gfa~~~ 451 (531)
|||+++
T Consensus 82 GfA~~~ 87 (87)
T 1b5f_B 82 GFAEAA 87 (87)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999863
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=94.81 E-value=0.039 Score=48.32 Aligned_cols=109 Identities=17% Similarity=0.219 Sum_probs=62.6
Q ss_pred eeEEEEeeEEEeCCeEeecCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCC-CC---CCC
Q 009593 305 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSS-QR---LPK 380 (531)
Q Consensus 305 ~~y~V~l~~i~Vgg~~~~~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~-~~---~~~ 380 (531)
..++|+ +.|||+.+. ++||||.+.+.++.+..+.+ +..+..... +. -.... .. ...
T Consensus 23 ~~l~v~---~~Ing~~v~-----~LVDTGAs~s~Is~~~A~rl--------GL~~~~~~~--~~--~~a~g~G~~~~~g~ 82 (148)
T 3s8i_A 23 TMLYIN---CKVNGHPLK-----AFVDSGAQMTIMSQACAERC--------NIMRLVDRR--WA--GVAKGVGTQRIIGR 82 (148)
T ss_dssp CCCEEE---EEETTEEEE-----EEECTTCSSCEEEHHHHHHT--------TCGGGEEGG--GC--EECCC---CEEEEE
T ss_pred CEEEEE---EEECCEEEE-----EEEeCCCCcEeeCHHHHHHc--------CCccccCcc--ee--EEEEcCCccEEEEE
Confidence 345555 447887655 99999999999999985544 221110000 00 00000 00 001
Q ss_pred CCeEEEEecCCcEEEEcCCeEEEEeccccceEE-EEEEecCCCceeeCccceeceEEEEeCCCCEEEEeeCC
Q 009593 381 LPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFC-LAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 451 (531)
Q Consensus 381 ~P~itf~f~gg~~~~i~~~~y~~~~~~~~~~~C-l~i~~~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~ 451 (531)
.+...+++ |+..+ .| +.+.....-..|||..||+.+-.+.|++++++-|...+
T Consensus 83 v~~~~I~I-g~~~~-----------------~~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~~ 136 (148)
T 3s8i_A 83 VHLAQIQI-EGDFL-----------------QCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTG 136 (148)
T ss_dssp EEEEEEEE-TTEEE-----------------EEEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTTC
T ss_pred EEEEEEEE-CCEEE-----------------EEEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccCC
Confidence 22234444 33321 13 33333333358999999999999999999999997653
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.98 E-value=0.17 Score=43.96 Aligned_cols=26 Identities=15% Similarity=0.058 Sum_probs=24.6
Q ss_pred ceeeCccceeceEEEEeCCCCEEEEe
Q 009593 423 IGTIGQNFMTGYRVVFDRENLKLGWS 448 (531)
Q Consensus 423 ~~ILG~~fl~~~yvvFD~e~~riGfa 448 (531)
..|||..||+.+-++.|+++++|-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 48999999999999999999999996
No 40
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=82.04 E-value=1.4 Score=35.85 Aligned_cols=27 Identities=26% Similarity=0.287 Sum_probs=24.0
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceEEec
Q 009593 103 HYTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (531)
Q Consensus 103 y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c 131 (531)
-++.|.|| .|.+.+++|||.|++-+.-
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 35689999 8999999999999999973
No 41
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=81.86 E-value=1.4 Score=35.45 Aligned_cols=26 Identities=31% Similarity=0.211 Sum_probs=23.5
Q ss_pred EEEEEecCCCeEEEEEEEcCCCceEEec
Q 009593 104 YTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (531)
Q Consensus 104 ~~~i~IGTP~q~~~v~vDTGS~~~Wv~c 131 (531)
++.|.|| .|.+.+++|||.|++-+..
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEE 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEec
Confidence 4689999 8999999999999999965
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=77.71 E-value=2.2 Score=34.20 Aligned_cols=26 Identities=23% Similarity=0.118 Sum_probs=23.4
Q ss_pred EEEEEecCCCeEEEEEEEcCCCceEEec
Q 009593 104 YTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (531)
Q Consensus 104 ~~~i~IGTP~q~~~v~vDTGS~~~Wv~c 131 (531)
++.|.|| .|.+.+++|||.|++-+..
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~ 35 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAG 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcC
Confidence 5689999 8999999999999999964
No 43
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=73.73 E-value=3.2 Score=34.02 Aligned_cols=28 Identities=21% Similarity=0.306 Sum_probs=24.2
Q ss_pred EEEEEec---CCCeEEEEEEEcCCCceEEec
Q 009593 104 YTWIDIG---TPNVSFLVALDAGSDLLWIPC 131 (531)
Q Consensus 104 ~~~i~IG---TP~q~~~v~vDTGS~~~Wv~c 131 (531)
.+.|.|| +|+|.+..++|||.|++-+..
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~ 42 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPI 42 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEec
Confidence 3466777 789999999999999999986
No 44
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=72.43 E-value=3.4 Score=34.18 Aligned_cols=26 Identities=19% Similarity=0.248 Sum_probs=23.0
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceEEec
Q 009593 103 HYTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (531)
Q Consensus 103 y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c 131 (531)
=++ |.|| .|.+.+++|||.|++-+.-
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 345 9999 8999999999999999975
No 45
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=70.34 E-value=3.9 Score=35.05 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=26.3
Q ss_pred CceEEEEEEecCCCeEEEEEEEcCCCceEEec
Q 009593 100 GWLHYTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (531)
Q Consensus 100 ~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c 131 (531)
...+|+++.|+ .+++.+++|||++.+-+.-
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 45678899998 8899999999999998875
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=65.52 E-value=6.5 Score=32.31 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=23.3
Q ss_pred EEEEEecCCCeEEEEEEEcCCCceEEec
Q 009593 104 YTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (531)
Q Consensus 104 ~~~i~IGTP~q~~~v~vDTGS~~~Wv~c 131 (531)
.+.|.|| .|.+..++|||.|++-+..
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~ 36 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKL 36 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEec
Confidence 3578999 8999999999999999975
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=62.59 E-value=6.6 Score=33.92 Aligned_cols=30 Identities=10% Similarity=0.185 Sum_probs=26.4
Q ss_pred ceEEEEEEecCCCeEEEEEEEcCCCceEEecC
Q 009593 101 WLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD 132 (531)
Q Consensus 101 ~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~ 132 (531)
..+|+++.|. .+++.++||||++.+.+.-.
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 3578899998 89999999999999999864
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=51.68 E-value=14 Score=31.24 Aligned_cols=27 Identities=11% Similarity=0.158 Sum_probs=23.7
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceEEec
Q 009593 103 HYTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (531)
Q Consensus 103 y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c 131 (531)
-++.+.|+ .|.+..++|||.+++-+..
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEEcc
Confidence 45688999 8999999999999999964
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=47.71 E-value=15 Score=30.65 Aligned_cols=21 Identities=29% Similarity=0.341 Sum_probs=18.7
Q ss_pred ecCCCeEEEEEEEcCCCceEEec
Q 009593 109 IGTPNVSFLVALDAGSDLLWIPC 131 (531)
Q Consensus 109 IGTP~q~~~v~vDTGS~~~Wv~c 131 (531)
|| .|.+..++|||.|++-+..
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISE 47 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEET
T ss_pred CC--CEEEEEEecCCCCcEEEec
Confidence 66 7889999999999999975
No 50
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=44.45 E-value=39 Score=26.54 Aligned_cols=32 Identities=28% Similarity=0.458 Sum_probs=23.5
Q ss_pred eeEEEEeeEEEeCCeEeecCcceEEEecCccceeccHH
Q 009593 305 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (531)
Q Consensus 305 ~~y~V~l~~i~Vgg~~~~~~~~~aiiDSGTs~t~LP~~ 342 (531)
..|.++ |.||.- +..+.++||||++.+++|..
T Consensus 13 ~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 13 AQYYGE---IGIGTP---PQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp TEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred CeEEEE---EEECCC---CeEEEEEEeCCCCceEEeEc
Confidence 466665 777742 12466999999999999965
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=44.30 E-value=19 Score=32.69 Aligned_cols=26 Identities=31% Similarity=0.190 Sum_probs=23.2
Q ss_pred EEEEEecCCCeEEEEEEEcCCCceEEec
Q 009593 104 YTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (531)
Q Consensus 104 ~~~i~IGTP~q~~~v~vDTGS~~~Wv~c 131 (531)
.+.|.|| .|.+..++|||.|++-+..
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEec
Confidence 4689999 8999999999999999964
No 52
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=36.81 E-value=31 Score=33.48 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=30.2
Q ss_pred eeeeeeecCCCceeEEEEeeEEEeCCeEeecCcceEEEecCccceeccHHH
Q 009593 293 QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEV 343 (531)
Q Consensus 293 ~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~~~~~~~aiiDSGTs~t~LP~~~ 343 (531)
++++..+...+ ..|.++ |.||. ..+.++||||++.+++|..-
T Consensus 3 ~~v~~~~~~~~-~~Y~~~---i~iG~-----Q~~~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 3 GSAVTTPQNND-EEYLTP---VTVGK-----STLHLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEEEECTTT-SCEEEE---EEEBT-----EEEEEEEETTCCCEEEECTT
T ss_pred ceEEeEEcCCC-CEEEEE---EEECC-----EEEEEEEeCCCccceEeeCC
Confidence 35566665554 677765 66773 35679999999999999754
No 53
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=36.28 E-value=30 Score=33.59 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=29.8
Q ss_pred eeeeeeecCCCceeEEEEeeEEEeCCeEeecCcceEEEecCccceeccHHH
Q 009593 293 QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEV 343 (531)
Q Consensus 293 ~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~~~~~~~aiiDSGTs~t~LP~~~ 343 (531)
++++..+...+ ..|.++ |.||. ..+.++||||++.+++|..-
T Consensus 4 g~v~~~~~~~~-~~Y~~~---i~iG~-----Q~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 4 GVATNTPTAND-EEYITP---VTIGG-----TTLNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEEEECGGG-SCEEEE---EEETT-----EEEEEEEETTCCCEEECBTT
T ss_pred CceeeeecCCC-CEEEEE---EEECC-----EEEEEEEeCCCcceEEecCC
Confidence 45556555443 667665 67883 34679999999999999754
No 54
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=35.49 E-value=34 Score=33.16 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=29.4
Q ss_pred eeeeeeecCCCceeEEEEeeEEEeCCeEeecCcceEEEecCccceeccHHH
Q 009593 293 QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEV 343 (531)
Q Consensus 293 ~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~~~~~~~aiiDSGTs~t~LP~~~ 343 (531)
++++..+...+ ..|.++ |.||. ..+.++||||++.+++|..-
T Consensus 4 ~~v~~~~~~~~-~~Y~~~---i~iG~-----q~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 4 GSVTTNPTSND-EEYITQ---VTVGD-----DTLGLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEEECGGG-CCEEEE---EEETT-----EEEEEEEETTCCCEEECBTT
T ss_pred CceeeeEcCCC-CEEEEE---EEECC-----EEEEEEEcCCCcceEEecCC
Confidence 45555555433 667665 67883 35679999999999999754
No 55
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=28.09 E-value=51 Score=29.90 Aligned_cols=27 Identities=30% Similarity=0.170 Sum_probs=23.6
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceEEec
Q 009593 103 HYTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (531)
Q Consensus 103 y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c 131 (531)
=.+++.|| .|.+..++|||.|++-+..
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 35689999 8999999999999999954
No 56
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=27.37 E-value=76 Score=30.67 Aligned_cols=43 Identities=21% Similarity=0.240 Sum_probs=28.5
Q ss_pred eeeee-ecCCCceeEEEEeeEEEeCCeEeecCcceEEEecCccceeccHHH
Q 009593 294 STSFL-ASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEV 343 (531)
Q Consensus 294 ~~~~v-~~~~~~~~y~V~l~~i~Vgg~~~~~~~~~aiiDSGTs~t~LP~~~ 343 (531)
+++.. +...+ ..|.++ |.||.- +..+.++||||++.+++|..-
T Consensus 4 ~v~~~~~~~~~-~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 4 SAPNHPSDSAD-SEYITS---VSIGTP---AQVLPLDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEEEESSTTC-CCEEEE---EEETTT---TEEEEEEEETTCCCEEECBTT
T ss_pred ceeeecCCCCC-CEEEEE---EEECCC---CeEEEEEEcCCCCCeEEecCC
Confidence 45555 43333 567665 778842 123569999999999999753
No 57
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=26.00 E-value=84 Score=30.38 Aligned_cols=43 Identities=21% Similarity=0.193 Sum_probs=28.3
Q ss_pred eeeee-ecCCCceeEEEEeeEEEeCCeEeecCcceEEEecCccceeccHHH
Q 009593 294 STSFL-ASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEV 343 (531)
Q Consensus 294 ~~~~v-~~~~~~~~y~V~l~~i~Vgg~~~~~~~~~aiiDSGTs~t~LP~~~ 343 (531)
+++.. +...+ ..|.++ |.||.- ...+.++||||++.+++|..-
T Consensus 4 ~v~~~~~~~~~-~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~~ 47 (329)
T 1oew_A 4 SATTTPIDSLD-DAYITP---VQIGTP---AQTLNLDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEEEESSTTC-CCEEEE---EEETTT---TEEEEEEEETTCCCEEECBTT
T ss_pred eeEeeecCCCC-CEEEEE---EEECCC---CeEEEEEECCCCCCeEEecCC
Confidence 44454 43333 567665 778842 123569999999999999753
No 58
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=25.47 E-value=82 Score=30.37 Aligned_cols=42 Identities=21% Similarity=0.311 Sum_probs=27.9
Q ss_pred eeeeeecCCCceeEEEEeeEEEeCCeEeecCcceEEEecCccceeccHH
Q 009593 294 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (531)
Q Consensus 294 ~~~~v~~~~~~~~y~V~l~~i~Vgg~~~~~~~~~aiiDSGTs~t~LP~~ 342 (531)
+++..+...+ ..|.++ |.||.- ...+.++||||++.+++|..
T Consensus 5 ~v~~~~~~~~-~~Y~~~---i~iGTP---~q~~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 5 TVPMTDYGND-IEYYGQ---VTIGTP---GKKFNLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEEEETTT-TEEEEE---EEETTT---TEEEEEEEETTCCCCEEEBT
T ss_pred ceeeeecCCC-CEEEEE---EEECCC---CeEEEEEEcCCCCCEEEccC
Confidence 4444444444 567665 678732 12356999999999999965
Done!