BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009595
(531 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 151/274 (55%), Gaps = 7/274 (2%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVR 276
G++Y L ++G ++A+K++K+ + Q + E+ HRN++ L +
Sbjct: 52 GKVYKGRL--ADGTLVAVKRLKEERXQGGEL---QFQTEVEMISMAVHRNLLRLRGFCMT 106
Query: 277 PDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
P LLV +M NGS+ L + + + L+W R RIA G GL YLH + P+IIHR
Sbjct: 107 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR 166
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
++ +++L+D++ EA + DFGLA+LM V + V GT+G+IAPEY T K SEK D
Sbjct: 167 DVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTD 225
Query: 397 IYSFGVLLAVLVMGKLPSD-DFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQ 455
++ +GV+L L+ G+ D + ++ L+ W++ ++ + +D L GN +E+
Sbjct: 226 VFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEE 285
Query: 456 MLLVLKIACFCTLDDPEERPNSKDVRSMLSDTAL 489
+ ++++A CT P ERP +V ML L
Sbjct: 286 VEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 319
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 150/274 (54%), Gaps = 7/274 (2%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVR 276
G++Y L ++G ++A+K++K+ + Q + E+ HRN++ L +
Sbjct: 44 GKVYKGRL--ADGXLVAVKRLKEERTQGGEL---QFQTEVEMISMAVHRNLLRLRGFCMT 98
Query: 277 PDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
P LLV +M NGS+ L + + + L+W R RIA G GL YLH + P+IIHR
Sbjct: 99 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR 158
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
++ +++L+D++ EA + DFGLA+LM V + V G +G+IAPEY T K SEK D
Sbjct: 159 DVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGXIGHIAPEYLSTGKSSEKTD 217
Query: 397 IYSFGVLLAVLVMGKLPSD-DFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQ 455
++ +GV+L L+ G+ D + ++ L+ W++ ++ + +D L GN +E+
Sbjct: 218 VFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEE 277
Query: 456 MLLVLKIACFCTLDDPEERPNSKDVRSMLSDTAL 489
+ ++++A CT P ERP +V ML L
Sbjct: 278 VEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 10/260 (3%)
Query: 228 NGKMIAIKKVK-QVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
N +A+KK+ VD + +K +Q EI + +H N+V LL D LV +
Sbjct: 53 NNTTVAVKKLAAMVDITTEELK-QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
M NGSLL+ L+ + G L W R +IA+G +G+ +LH H IHR+I +++L+D
Sbjct: 112 MPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 167
Query: 347 DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAV 406
+ A+I+DFGLAR V S + GT Y+APE + + + K DIYSFGV+L
Sbjct: 168 EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLE 226
Query: 407 LVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFC 466
++ G LP+ D +H E + L+ + E K + + + + +A C
Sbjct: 227 IITG-LPAVD--EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQC 283
Query: 467 TLDDPEERPNSKDVRSMLSD 486
+ +RP+ K V+ +L +
Sbjct: 284 LHEKKNKRPDIKKVQQLLQE 303
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 132/260 (50%), Gaps = 10/260 (3%)
Query: 228 NGKMIAIKKVK-QVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
N +A+KK+ VD + +K +Q EI + +H N+V LL D LV +
Sbjct: 53 NNTTVAVKKLAAMVDITTEELK-QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
M NGSLL+ L+ + G L W R +IA+G +G+ +LH H IHR+I +++L+D
Sbjct: 112 MPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 167
Query: 347 DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAV 406
+ A+I+DFGLAR V + GT Y+APE + + + K DIYSFGV+L
Sbjct: 168 EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLE 226
Query: 407 LVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFC 466
++ G LP+ D +H E + L+ + E K + + + + +A C
Sbjct: 227 IITG-LPAVD--EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQC 283
Query: 467 TLDDPEERPNSKDVRSMLSD 486
+ +RP+ K V+ +L +
Sbjct: 284 LHEKKNKRPDIKKVQQLLQE 303
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 132/260 (50%), Gaps = 10/260 (3%)
Query: 228 NGKMIAIKKVK-QVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
N +A+KK+ VD + +K +Q EI + +H N+V LL D LV +
Sbjct: 47 NNTTVAVKKLAAMVDITTEELK-QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 105
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
M NGSLL+ L+ + G L W R +IA+G +G+ +LH H IHR+I +++L+D
Sbjct: 106 MPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 161
Query: 347 DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAV 406
+ A+I+DFGLAR V + GT Y+APE + + + K DIYSFGV+L
Sbjct: 162 EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLE 220
Query: 407 LVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFC 466
++ G LP+ D +H E + L+ + E K + + + + +A C
Sbjct: 221 IITG-LPAVD--EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQC 277
Query: 467 TLDDPEERPNSKDVRSMLSD 486
+ +RP+ K V+ +L +
Sbjct: 278 LHEKKNKRPDIKKVQQLLQE 297
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 10/260 (3%)
Query: 228 NGKMIAIKKVKQ-VDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
N +A+KK+ VD + +K +Q EI + +H N+V LL D LV +
Sbjct: 44 NNTTVAVKKLAAMVDITTEELK-QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVY 102
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
NGSLL+ L+ + G L W R +IA+G +G+ +LH H IHR+I +++L+D
Sbjct: 103 XPNGSLLDRLSCLD-GTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 158
Query: 347 DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAV 406
+ A+I+DFGLAR V S + GT Y APE + + + K DIYSFGV+L
Sbjct: 159 EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLE 217
Query: 407 LVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFC 466
++ G LP+ D +H E + L+ + E K + + +A C
Sbjct: 218 IITG-LPAVD--EHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQC 274
Query: 467 TLDDPEERPNSKDVRSMLSD 486
+ +RP+ K V+ +L +
Sbjct: 275 LHEKKNKRPDIKKVQQLLQE 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 109/205 (53%), Gaps = 9/205 (4%)
Query: 209 EKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
EKI + + G ++ AE +G +A+K + + D ++ + E+ ++RH NIV
Sbjct: 43 EKIGAGSFGTVHRAEW---HGSDVAVKILMEQD--FHAERVNEFLREVAIMKRLRHPNIV 97
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
+ + +P +V+E++ GSL +L+ S R +L+ R +A + G+ YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
P I+HRN+ ++L+D ++ DFGL+RL +S+ AGT ++APE +
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 389 LKFSEKCDIYSFGVLLAVLVMGKLP 413
+EK D+YSFGV+L L + P
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 108/205 (52%), Gaps = 9/205 (4%)
Query: 209 EKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
EKI + + G ++ AE +G +A+K + + D ++ + E+ ++RH NIV
Sbjct: 43 EKIGAGSFGTVHRAEW---HGSDVAVKILMEQD--FHAERVNEFLREVAIMKRLRHPNIV 97
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
+ + +P +V+E++ GSL +L+ S R +L+ R +A + G+ YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
P I+HR++ ++L+D ++ DFGL+RL + + AGT ++APE +
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRD 213
Query: 389 LKFSEKCDIYSFGVLLAVLVMGKLP 413
+EK D+YSFGV+L L + P
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 134/268 (50%), Gaps = 35/268 (13%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVR 276
G++ I E + G +A+K + + L++ + +++ EI RH +I+ L +
Sbjct: 25 GKVKIGE-HQLTGHKVAVKILNRQKIRSLDV-VGKIKREIQNLKLFRHPHIIKLYQVIST 82
Query: 277 PDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
P +V E++ G L + + GR E E AR R+ + I+S ++Y H R ++HR
Sbjct: 83 PTDFFMVMEYVSGGELFDYI--CKHGRVE-EMEAR-RLFQQILSAVDYCH---RHMVVHR 135
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQTLKFSEKC 395
++ P +VL+D M A+IADFGL+ +M DG + TS G+ Y APE L +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEF-LRTS--CGSPNYAAPEVISGRLYAGPEV 192
Query: 396 DIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRN--VMTSENPNRAIDSKLLGNGYE 453
DI+S GV+L L+ G LP DD +H +L + +R E NR++ + L+
Sbjct: 193 DIWSCGVILYALLCGTLPFDD--EHV--PTLFKKIRGGVFYIPEYLNRSVATLLM----- 243
Query: 454 EQMLLVLKIACFCTLDDPEERPNSKDVR 481
ML V DP +R KD+R
Sbjct: 244 -HMLQV----------DPLKRATIKDIR 260
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 132/268 (49%), Gaps = 35/268 (13%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVR 276
G++ I E + G +A+K + + L++ + +++ EI RH +I+ L +
Sbjct: 25 GKVKIGE-HQLTGHKVAVKILNRQKIRSLDV-VGKIKREIQNLKLFRHPHIIKLYQVIST 82
Query: 277 PDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
P +V E++ G L + + GR E E AR R+ + I+S ++Y H R ++HR
Sbjct: 83 PTDFFMVMEYVSGGELFDYI--CKHGRVE-EMEAR-RLFQQILSAVDYCH---RHMVVHR 135
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQTLKFSEKC 395
++ P +VL+D M A+IADFGL+ +M DG + G+ Y APE L +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVISGRLYAGPEV 192
Query: 396 DIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRN--VMTSENPNRAIDSKLLGNGYE 453
DI+S GV+L L+ G LP DD +H +L + +R E NR++ + L+
Sbjct: 193 DIWSCGVILYALLCGTLPFDD--EHV--PTLFKKIRGGVFYIPEYLNRSVATLLM----- 243
Query: 454 EQMLLVLKIACFCTLDDPEERPNSKDVR 481
ML V DP +R KD+R
Sbjct: 244 -HMLQV----------DPLKRATIKDIR 260
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 12/192 (6%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
E G +A+K + + L++ + ++R EI RH +I+ L + P +V E
Sbjct: 38 ELTGHKVAVKILNRQKIRSLDV-VGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME 96
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
++ G L + + GR L+ R+ + I+SG++Y H R ++HR++ P +VL+
Sbjct: 97 YVSGGELFDYI--CKNGR--LDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLL 149
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQTLKFSEKCDIYSFGVLL 404
D M A+IADFGL+ +M DG + G+ Y APE L + DI+S GV+L
Sbjct: 150 DAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVISGRLYAGPEVDIWSSGVIL 206
Query: 405 AVLVMGKLPSDD 416
L+ G LP DD
Sbjct: 207 YALLCGTLPFDD 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 119/241 (49%), Gaps = 21/241 (8%)
Query: 184 PTIF--SPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVD 241
PTI+ SP +K ++ E+ D + K+ GE+Y + + +A+K +K+
Sbjct: 203 PTIYGVSPNYDKWEM---ERTDITMK-HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKED- 256
Query: 242 NSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQ 301
+++ + E +I+H N+V LL R +++EFM G+LL+ L + +
Sbjct: 257 ----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN- 311
Query: 302 GRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL 361
R+E+ + +A I S +EYL + IHRN+ + L+ ++ ++ADFGL+RL
Sbjct: 312 -RQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 367
Query: 362 MPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLVMGKLPSDDFF 418
M G + + + + APE KFS K D+++FGVLL A M P D
Sbjct: 368 M-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 426
Query: 419 Q 419
Q
Sbjct: 427 Q 427
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 21/241 (8%)
Query: 184 PTIF--SPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVD 241
PT++ SP +K ++ E+ D + K+ GE+Y + + +A+K +K+
Sbjct: 200 PTVYGVSPNYDKWEM---ERTDITMK-HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKED- 253
Query: 242 NSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQ 301
+++ + E +I+H N+V LL R +++EFM G+LL+ L + +
Sbjct: 254 ----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN- 308
Query: 302 GRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL 361
R+E+ + +A I S +EYL + IHRN+ + L+ ++ ++ADFGL+RL
Sbjct: 309 -RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 364
Query: 362 MPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLVMGKLPSDDFF 418
M G + + + + APE KFS K D+++FGVLL A M P D
Sbjct: 365 M-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 423
Query: 419 Q 419
Q
Sbjct: 424 Q 424
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 17/264 (6%)
Query: 165 PTTPSLLLAAVRGGGQNRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAEL 224
PTT +L G N+ F+ I C + I + GE+Y L
Sbjct: 15 PTTENLYFQGAMGSDPNQAVLKFTTEIHP---------SCVTRQKVIGAGEFGEVYKGML 65
Query: 225 PESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVS 284
S+GK +K + + E GQ H NI+ L + + ++++
Sbjct: 66 KTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT 125
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
E+M+NG+L + L + E L + RGI +G++YL + +HR++ ++L
Sbjct: 126 EYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNIL 179
Query: 345 IDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVL 403
++ ++ +++DFGL+R++ D A +TS + + APE KF+ D++SFG++
Sbjct: 180 VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIV 239
Query: 404 L-AVLVMGKLPSDDFFQHTEEKSL 426
+ V+ G+ P + H K++
Sbjct: 240 MWEVMTYGERPYWELSNHEVMKAI 263
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 16/224 (7%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH ++V L+ + +L+ ++M+NG+L L + W R I G GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIA 382
YLH IIHR++ ++L+D++ +I DFG+++ + +V GT+GYI
Sbjct: 153 HYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 383 PEYHQTLKFSEKCDIYSFGVLLAVLVMGK------LPSDDFFQHTEEKSLVRWMRNVMTS 436
PEY + +EK D+YSFGV+L ++ + LP E +L W +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-------EMVNLAEWAVESHNN 262
Query: 437 ENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDV 480
+ +D L E + A C E+RP+ DV
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 16/224 (7%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH ++V L+ + +L+ ++M+NG+L L + W R I G GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIA 382
YLH IIHR++ ++L+D++ +I DFG+++ + +V GT+GYI
Sbjct: 153 HYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 383 PEYHQTLKFSEKCDIYSFGVLLAVLVMGK------LPSDDFFQHTEEKSLVRWMRNVMTS 436
PEY + +EK D+YSFGV+L ++ + LP E +L W +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-------EMVNLAEWAVESHNN 262
Query: 437 ENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDV 480
+ +D L E + A C E+RP+ DV
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 96/169 (56%), Gaps = 12/169 (7%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLA 310
+V EI +RH +I+ L + P ++V E+ E+ + + + +R E
Sbjct: 55 RVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGG----ELFDYIVEKKRMTEDEG 110
Query: 311 RHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
R R + I+ +EY H R +I+HR++ P ++L+DD++ +IADFGL+ +M DG+ +
Sbjct: 111 R-RFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF-LK 165
Query: 371 TSIVAGTVGYIAPEY-HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFF 418
TS G+ Y APE + L + D++S G++L V+++G+LP DD F
Sbjct: 166 TS--CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 21/241 (8%)
Query: 184 PTIF--SPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVD 241
PT++ SP +K ++ E+ D + K+ GE+Y + + +A+K +K+
Sbjct: 242 PTVYGVSPNYDKWEM---ERTDITMK-HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKED- 295
Query: 242 NSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQ 301
+++ + E +I+H N+V LL R +++EFM G+LL+ L + +
Sbjct: 296 ----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN- 350
Query: 302 GRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL 361
R+E+ + +A I S +EYL + IHRN+ + L+ ++ ++ADFGL+RL
Sbjct: 351 -RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 406
Query: 362 MPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLVMGKLPSDDFF 418
M G + + + + APE KFS K D+++FGVLL A M P D
Sbjct: 407 M-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 465
Query: 419 Q 419
Q
Sbjct: 466 Q 466
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 33/259 (12%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL 296
+K+++ M ++ EI Q H NIV V D LV + + GS+L+I+
Sbjct: 45 IKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDII 104
Query: 297 ND-VSQGRRELEWLARHRIA---RGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEAR 352
V++G + L IA R ++ GLEYLH + IHR++ ++L+ +D +
Sbjct: 105 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQ 161
Query: 353 IADFGLARLMPDG----HAQVSTSIVAGTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVL 407
IADFG++ + G +V + V GT ++APE + ++ + K DI+SFG+ L
Sbjct: 162 IADFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 408 VMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLL------VLK 461
G P + ++ K L+ ++N D L G +++ +L K
Sbjct: 221 ATGAAP---YHKYPPMKVLMLTLQN-----------DPPSLETGVQDKEMLKKYGKSFRK 266
Query: 462 IACFCTLDDPEERPNSKDV 480
+ C DPE+RP + ++
Sbjct: 267 MISLCLQKDPEKRPTAAEL 285
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 33/259 (12%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL 296
+K+++ M ++ EI Q H NIV V D LV + + GS+L+I+
Sbjct: 40 IKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDII 99
Query: 297 ND-VSQGRRELEWLARHRIA---RGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEAR 352
V++G + L IA R ++ GLEYLH + IHR++ ++L+ +D +
Sbjct: 100 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQ 156
Query: 353 IADFGLARLMPDG----HAQVSTSIVAGTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVL 407
IADFG++ + G +V + V GT ++APE + ++ + K DI+SFG+ L
Sbjct: 157 IADFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 408 VMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLL------VLK 461
G P + ++ K L+ ++N D L G +++ +L K
Sbjct: 216 ATGAAP---YHKYPPMKVLMLTLQN-----------DPPSLETGVQDKEMLKKYGKSFRK 261
Query: 462 IACFCTLDDPEERPNSKDV 480
+ C DPE+RP + ++
Sbjct: 262 MISLCLQKDPEKRPTAAEL 280
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 28/220 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNG---KMIAIKKVKQVD-------NSLLNIKMRQVRAEIM 257
+ K+ S A GE+ + + E NG K I + K Q D N + ++ EI
Sbjct: 41 VRKLGSGAYGEVLLCK--EKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS 98
Query: 258 TAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWLARHRIAR 316
+ H NI+ L LV+EF + G L E I+N R + + I +
Sbjct: 99 LLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN-----RHKFDECDAANIMK 153
Query: 317 GIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD---MEARIADFGLARLMPDGHAQVSTSI 373
I+SG+ YLH + I+HR+I P ++L+++ + +I DFGL+ +
Sbjct: 154 QILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR-- 208
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
GT YIAPE + K++EKCD++S GV++ +L+ G P
Sbjct: 209 -LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 42 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 96
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 97 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 151
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 152 KVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 210
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 211 MSPYPGIDLSQVYE 224
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 43 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 97
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 98 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 152
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 153 KVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 211
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 212 MSPYPGIDLSQVYE 225
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + +GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 18 VERLGAGQAGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 69
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 70 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 126
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 127 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREG-AKFPIKWTAPEAI 182
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 236
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 237 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 54 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 108
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 109 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 163
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 164 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 222
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 223 MSPYPGIDLSQVYE 236
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 43 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 97
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 98 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 152
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 153 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 211
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 212 MSPYPGIDLSQVYE 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 46 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 100
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 101 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 155
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 156 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 215 MSPYPGIDLSQVYE 228
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 14 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 65
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 66 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 122
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHRN+ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 123 ERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAI 178
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 232
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 233 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 46 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 100
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 101 LLDYLRECN--RQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 155
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 156 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 215 MSPYPGIDLSQVYE 228
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 41 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 96 LLDYLRECN--RQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 150
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 151 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 210 MSPYPGIDLSQVYE 223
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 46 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 100
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 101 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 155
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 156 KVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 215 MSPYPGIDLSQVYE 228
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 41 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 96 LLDYLRECN--RQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 150
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 151 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 210 MSPYPGIDLSQVYE 223
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 46 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 100
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 101 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 155
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 156 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 215 MSPYPGIDLSQVYE 228
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 45 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 99
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 100 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 154
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 155 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 213
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 214 MSPYPGIDLSQVYE 227
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 43 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 97
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 98 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 152
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 153 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 211
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 212 MSPYPGIDLSQVYE 225
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 27/234 (11%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
A++M +IRH +V L A +V + +V+E+M GSLL+ L L L
Sbjct: 64 AQVMK--KIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-- 118
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+A I SG+ Y+ R +HR++ +++L+ +++ ++ADFGLARL+ D
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG- 174
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRN 432
+ + APE +F+ K D++SFG+LL L G++P + R R
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
Query: 433 VMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E P D + C C DPEERP + +++ L D
Sbjct: 235 PCPPECPESLHD-----------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 41 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 96 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 150
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 151 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 210 MSPYPGIDLSQVYE 223
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 210 KIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
K+ GE+++ NG +AIK +K ++ + A++M ++RH +V
Sbjct: 25 KLGQGCFGEVWMGTW---NGTTRVAIKTLKP---GTMSPEAFLQEAQVMK--KLRHEKLV 76
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L A +V + +V+E+M GSLL+ L L L +A I SG+ Y+
Sbjct: 77 QLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIASGMAYVE-- 131
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
R +HR++ +++L+ +++ ++ADFGLARL+ D + + APE
Sbjct: 132 -RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALY 189
Query: 389 LKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKL 447
+F+ K D++SFG+LL L G++P + R R E P D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD--- 246
Query: 448 LGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C DPEERP + +++ L D
Sbjct: 247 --------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 41 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 96 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 150
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 151 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 210 MSPYPGIDLSQVYE 223
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 39 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 93
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 94 LLDYLRECN--RQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 148
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 149 KVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 207
Query: 409 MGKLPSDD 416
M P D
Sbjct: 208 MSPYPGID 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 122/279 (43%), Gaps = 34/279 (12%)
Query: 210 KIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
K+ GE+++ NG +AIK +K N+ E ++RH +V
Sbjct: 192 KLGQGCFGEVWMGTW---NGTTRVAIKTLKPG-----NMSPEAFLQEAQVMKKLRHEKLV 243
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L A +V + +V+E+M GSLL+ L L L +A I SG+ Y+
Sbjct: 244 QLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIASGMAYVE-- 298
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
R +HR++ +++L+ +++ ++ADFGL RL+ D + + + + APE
Sbjct: 299 -RMNYVHRDLRAANILVGENLVCKVADFGLGRLIED-NEYTARQGAKFPIKWTAPEAALY 356
Query: 389 LKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKL 447
+F+ K D++SFG+LL L G++P + R R E P D
Sbjct: 357 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD--- 413
Query: 448 LGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C DPEERP + +++ L D
Sbjct: 414 --------------LMCQCWRKDPEERPTFEYLQAFLED 438
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 27/234 (11%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
A++M ++RH +V L A +V + +V+E+M GSLL+ L L L
Sbjct: 55 AQVMK--KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-- 109
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+A I SG+ Y+ R +HR++ +++L+ +++ ++ADFGLARL+ D
Sbjct: 110 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG- 165
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRN 432
+ + APE +F+ K D++SFG+LL L G++P + R R
Sbjct: 166 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 225
Query: 433 VMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E P D + C C DPEERP + +++ L D
Sbjct: 226 PCPPECPESLHD-----------------LMCQCWRKDPEERPTFEYLQAFLED 262
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 19 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 70
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 71 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 127
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 128 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAI 183
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 184 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 237
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 238 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 267
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 34/272 (12%)
Query: 217 GEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV 275
GE+++ NG +AIK +K ++ + A++M ++RH +V L A +V
Sbjct: 198 GEVWMGTW---NGTTRVAIKTLKP---GTMSPEAFLQEAQVMK--KLRHEKLVQLYA-VV 248
Query: 276 RPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIH 335
+ +V+E+M GSLL+ L + L L +A I SG+ Y+ R +H
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIASGMAYVE---RMNYVH 303
Query: 336 RNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
R++ +++L+ +++ ++ADFGLARL+ D + + APE +F+ K
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIKS 362
Query: 396 DIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEE 454
D++SFG+LL L G++P + R R E P D
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 412
Query: 455 QMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C +PEERP + +++ L D
Sbjct: 413 -------LMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 26 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 77
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 78 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 134
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 135 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAI 190
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 191 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 244
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 245 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 274
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 24 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 75
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 76 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 132
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 133 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAI 188
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 242
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 243 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 272
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 210 KIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
K+ GE+++ NG +AIK +K ++ + A++M ++RH +V
Sbjct: 25 KLGQGCFGEVWMGTW---NGTTRVAIKTLKP---GTMSPEAFLQEAQVMK--KLRHEKLV 76
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L A +V + +V+E+M GSLL+ L L L +A I SG+ Y+
Sbjct: 77 QLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIASGMAYVE-- 131
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
R +HR++ +++L+ +++ ++ADFGLARL+ D + + APE
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALY 189
Query: 389 LKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKL 447
+F+ K D++SFG+LL L G++P + R R E P D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD--- 246
Query: 448 LGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C DPEERP + +++ L D
Sbjct: 247 --------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 18 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 69
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 70 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 126
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 127 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAI 182
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 236
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 237 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 34/272 (12%)
Query: 217 GEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV 275
GE+++ NG +AIK +K ++ + A++M ++RH +V L A +V
Sbjct: 198 GEVWMGTW---NGTTRVAIKTLKP---GTMSPEAFLQEAQVMK--KLRHEKLVQLYA-VV 248
Query: 276 RPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIH 335
+ +V+E+M GSLL+ L + L L +A I SG+ Y+ R +H
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIASGMAYVE---RMNYVH 303
Query: 336 RNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
R++ +++L+ +++ ++ADFGLARL+ D + + APE +F+ K
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIKS 362
Query: 396 DIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEE 454
D++SFG+LL L G++P + R R E P D
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 412
Query: 455 QMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C +PEERP + +++ L D
Sbjct: 413 -------LMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 18 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 69
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 70 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 126
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 127 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAI 182
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 236
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 237 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 27 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 78
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 79 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 135
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 136 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAI 191
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 192 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 245
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 246 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 275
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 24 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 75
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 76 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 132
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 133 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAI 188
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 242
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 243 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 272
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 20 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 71
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 72 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 128
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 129 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAI 184
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 185 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 238
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 239 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 268
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 27/234 (11%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
A++M ++RH +V L A +V + +V+E+M GSLL+ L L L
Sbjct: 53 AQVMK--KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-- 107
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+A I SG+ Y+ R +HR++ +++L+ +++ ++ADFGLARL+ D
Sbjct: 108 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG- 163
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRN 432
+ + APE +F+ K D++SFG+LL L G++P + R R
Sbjct: 164 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 223
Query: 433 VMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E P D + C C DPEERP + +++ L D
Sbjct: 224 PCPPECPESLHD-----------------LMCQCWRKDPEERPTFEYLQAFLED 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 23 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 74
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 75 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 131
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 132 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAI 187
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 188 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 241
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 242 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 271
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 90/165 (54%), Gaps = 8/165 (4%)
Query: 249 MRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEW 308
+++ E+ + Q+ H+NIV ++ DC+ LV E+++ +L E + S G ++
Sbjct: 55 LKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDT 112
Query: 309 LARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQ 368
I+ G+++ H RI+HR+I P ++LID + +I DFG+A+ + + +
Sbjct: 113 AIN--FTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-SL 166
Query: 369 VSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
T+ V GTV Y +PE + E DIYS G++L +++G+ P
Sbjct: 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 27/234 (11%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
A++M ++RH +V L A +V + +V+E+M GSLL+ L + L L
Sbjct: 57 AQVMK--KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-- 111
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+A I SG+ Y+ R +HR++ +++L+ +++ ++ADFGLARL+ D
Sbjct: 112 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG- 167
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRN 432
+ + APE +F+ K D++SFG+LL L G++P + R R
Sbjct: 168 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 227
Query: 433 VMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E P D + C C +PEERP + +++ L D
Sbjct: 228 PCPPECPESLHD-----------------LMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 34/279 (12%)
Query: 210 KIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
K+ GE+++ NG +AIK +K ++ + A++M ++RH +V
Sbjct: 15 KLGQGCFGEVWMGTW---NGTTRVAIKTLKP---GTMSPEAFLQEAQVMK--KLRHEKLV 66
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L A +V + +V+E+M GSLL+ L + L L +A I SG+ Y+
Sbjct: 67 QLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIASGMAYVE-- 121
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
R +HR++ +++L+ +++ ++ADFGLARL+ D + + APE
Sbjct: 122 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG-AKFPIKWTAPEAALY 179
Query: 389 LKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKL 447
+F+ K D++SFG+LL L G++P + R R E P D
Sbjct: 180 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD--- 236
Query: 448 LGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C +PEERP + +++ L D
Sbjct: 237 --------------LMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 18 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 69
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 70 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 126
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 127 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAI 182
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 236
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 237 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R ++ EFM G+
Sbjct: 42 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 96
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 97 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 151
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 152 KVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 210
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 211 MSPYPGIDLSQVYE 224
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 210 KIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
K+ GE+++ NG +AIK +K ++ + A++M ++RH +V
Sbjct: 25 KLGQGCFGEVWMGTW---NGTTRVAIKTLKP---GTMSPEAFLQEAQVMK--KLRHEKLV 76
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L A +V + +V E+M GSLL+ L L L +A I SG+ Y+
Sbjct: 77 QLYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIASGMAYVE-- 131
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
R +HR++ +++L+ +++ ++ADFGLARL+ D + + APE
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALY 189
Query: 389 LKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKL 447
+F+ K D++SFG+LL L G++P + R R E P D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD--- 246
Query: 448 LGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C DPEERP + +++ L D
Sbjct: 247 --------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 28 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 79
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A +V + +++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 80 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 136
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 137 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAI 192
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 193 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 246
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 247 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 276
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R ++ EFM G+
Sbjct: 41 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 95
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 96 LLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 150
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 151 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 210 MSPYPGIDLSQVYE 223
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 217 GEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV 275
GE+++ NG +AIK +K ++ + A++M ++RH +V L A +V
Sbjct: 198 GEVWMGTW---NGTTRVAIKTLKP---GTMSPEAFLQEAQVMK--KLRHEKLVQLYA-VV 248
Query: 276 RPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIH 335
+ +V E+M GSLL+ L + L L +A I SG+ Y+ R +H
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIASGMAYVE---RMNYVH 303
Query: 336 RNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
R++ +++L+ +++ ++ADFGLARL+ D + + APE +F+ K
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIKS 362
Query: 396 DIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEE 454
D++SFG+LL L G++P + R R E P D
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 412
Query: 455 QMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C +PEERP + +++ L D
Sbjct: 413 -------LMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 217 GEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV 275
GE+++ NG +AIK +K ++ + A++M ++RH +V L A +V
Sbjct: 281 GEVWMGTW---NGTTRVAIKTLKP---GTMSPEAFLQEAQVMK--KLRHEKLVQLYA-VV 331
Query: 276 RPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIH 335
+ +V+E+M GSLL+ L + L L +A I SG+ Y+ R +H
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIASGMAYVE---RMNYVH 386
Query: 336 RNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
R++ +++L+ +++ ++ADFGLARL+ D + + + + APE +F+ K
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 396 DIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEE 454
D++SFG+LL L G++P + R R E P D
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 495
Query: 455 QMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C +PEERP + +++ L D
Sbjct: 496 -------LMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R ++ EFM G+
Sbjct: 41 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 95
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 96 LLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 150
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 151 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 210 MSPYPGIDLSQVYE 223
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R +++EFM G+
Sbjct: 39 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 93
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 94 LLDYLRECN--RQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 148
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 149 KVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 207
Query: 409 MGKLPSDD 416
M P D
Sbjct: 208 MSPYPGID 215
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R ++ EFM G+
Sbjct: 46 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 100
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 101 LLDYLRECN--RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 155
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 156 KVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 409 MGKLPSDDFFQHTE 422
M P D Q E
Sbjct: 215 MSPYPGIDLSQVYE 228
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 98/191 (51%), Gaps = 17/191 (8%)
Query: 228 NGKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
GK +A+K + Q+++S L R+VR IM + H NIV L + LV E
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVR--IMKV--LNHPNIVKLFEVIETEKTLYLVME 93
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G + + L V+ GR + E AR + R IVS ++Y H + I+HR++ ++L+
Sbjct: 94 YASGGEVFDYL--VAHGRMK-EKEARAKF-RQIVSAVQYCH---QKFIVHRDLKAENLLL 146
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLL 404
D DM +IADFG + G+ G+ Y APE Q K+ + D++S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 405 AVLVMGKLPSD 415
LV G LP D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 34/281 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+E++ + GE+++ NG +A+K +KQ S AE Q++H+
Sbjct: 13 VERLGAGQFGEVWMGYY---NGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQR 64
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+V L A + + ++ ++E+M+NGSL++ L S + + L +A I G+ ++
Sbjct: 65 LVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAEGMAFIE 121
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
IHR++ +++L+ D + +IADFGLARL+ D + + APE
Sbjct: 122 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAI 177
Query: 387 QTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
F+ K D++SFG+LL +V G++P ++L R R V P
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP------ 231
Query: 446 KLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E++ ++++ C + PE+RP +RS+L D
Sbjct: 232 --------EELYQLMRL---CWKERPEDRPTFDYLRSVLED 261
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 98/191 (51%), Gaps = 17/191 (8%)
Query: 228 NGKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
GK +A+K + Q+++S L R+VR IM + H NIV L + LV E
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVR--IMKV--LNHPNIVKLFEVIETEKTLYLVME 93
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G + + L V+ GR + E AR + R IVS ++Y H + I+HR++ ++L+
Sbjct: 94 YASGGEVFDYL--VAHGRMK-EKEARAKF-RQIVSAVQYCH---QKFIVHRDLKAENLLL 146
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLL 404
D DM +IADFG + G+ G+ Y APE Q K+ + D++S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 405 AVLVMGKLPSD 415
LV G LP D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 34/279 (12%)
Query: 210 KIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
K+ GE+++ NG +AIK +K ++ + A++M ++RH +V
Sbjct: 22 KLGQGCFGEVWMGTW---NGTTRVAIKTLKP---GTMSPEAFLQEAQVMK--KLRHEKLV 73
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L A +V + +V+E+M GSLL+ L + L L ++ I SG+ Y+
Sbjct: 74 QLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD--MSAQIASGMAYVE-- 128
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
R +HR++ +++L+ +++ ++ADFGLARL+ D + + APE
Sbjct: 129 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQG-AKFPIKWTAPEAALY 186
Query: 389 LKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKL 447
+F+ K D++SFG+LL L G++P + R R E P D
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD--- 243
Query: 448 LGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C +PEERP + +++ L D
Sbjct: 244 --------------LMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 27/234 (11%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
A++M ++RH +V L A +V + +V E+M GSLL+ L L L
Sbjct: 64 AQVMK--KLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD-- 118
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+A I SG+ Y+ R +HR++ +++L+ +++ ++ADFGLARL+ D
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG- 174
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRN 432
+ + APE +F+ K D++SFG+LL L G++P + R R
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
Query: 433 VMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E P D + C C DPEERP + +++ L D
Sbjct: 235 PCPPECPESLHD-----------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 27/234 (11%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
A++M ++RH +V L A +V + +V+E+M GSLL+ L + L L
Sbjct: 61 AQVMK--KLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD-- 115
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
++ I SG+ Y+ R +HR++ +++L+ +++ ++ADFGLARL+ D
Sbjct: 116 MSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG- 171
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRN 432
+ + APE +F+ K D++SFG+LL L G++P + R R
Sbjct: 172 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 231
Query: 433 VMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E P D + C C +PEERP + +++ L D
Sbjct: 232 PCPPECPESLHD-----------------LMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 17/191 (8%)
Query: 228 NGKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
G+ +AIK + Q++ + L R+VR IM + H NIV L + L+ E
Sbjct: 36 TGREVAIKIIDKTQLNPTSLQKLFREVR--IMKI--LNHPNIVKLFEVIETEKTLYLIME 91
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G + + L V+ GR + E AR + R IVS ++Y H + RI+HR++ ++L+
Sbjct: 92 YASGGEVFDYL--VAHGRMK-EKEARSKF-RQIVSAVQYCH---QKRIVHRDLKAENLLL 144
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLL 404
D DM +IADFG + G ++ T G+ Y APE Q K+ + D++S GV+L
Sbjct: 145 DADMNIKIADFGFSNEFTVG-GKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 201
Query: 405 AVLVMGKLPSD 415
LV G LP D
Sbjct: 202 YTLVSGSLPFD 212
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 210 KIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
K+ GE+++ NG +AIK +K ++ + A++M ++RH +V
Sbjct: 25 KLGQGCFGEVWMGTW---NGTTRVAIKTLKP---GTMSPEAFLQEAQVMK--KLRHEKLV 76
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L A +V + +V+E+M G LL+ L L L +A I SG+ Y+
Sbjct: 77 QLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD--MAAQIASGMAYVE-- 131
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
R +HR++ +++L+ +++ ++ADFGLARL+ D + + APE
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALY 189
Query: 389 LKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKL 447
+F+ K D++SFG+LL L G++P + R R E P D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD--- 246
Query: 448 LGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C DPEERP + +++ L D
Sbjct: 247 --------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 27/234 (11%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
A++M ++RH +V L A +V + +V E+M GSLL+ L L L
Sbjct: 64 AQVMK--KLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD-- 118
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+A I SG+ Y+ R +HR++ +++L+ +++ ++ADFGLARL+ D
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG- 174
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRN 432
+ + APE +F+ K D++SFG+LL L G++P + R R
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
Query: 433 VMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
E P D + C C DPEERP + +++ L D
Sbjct: 235 PCPPECPESLHD-----------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K+ +++ + E +I+H N+V LL R ++ EFM G+
Sbjct: 39 VAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 93
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
LL+ L + + R+E+ + +A I S +EYL + IHR++ + L+ ++
Sbjct: 94 LLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 148
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL---AVLV 408
++ADFGL+RLM G + + + + APE KFS K D+++FGVLL A
Sbjct: 149 KVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 207
Query: 409 MGKLPSDD 416
M P D
Sbjct: 208 MSPYPGID 215
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 97/191 (50%), Gaps = 17/191 (8%)
Query: 228 NGKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
GK +A+K + Q+++S L R+VR IM + H NIV L + LV E
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVR--IMKV--LNHPNIVKLFEVIETEKTLYLVME 93
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G + + L V+ GR + E AR + R IVS ++Y H + I+HR++ ++L+
Sbjct: 94 YASGGEVFDYL--VAHGRMK-EKEARAKF-RQIVSAVQYCH---QKFIVHRDLKAENLLL 146
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLL 404
D DM +IADFG + G+ G Y APE Q K+ + D++S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGN---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 405 AVLVMGKLPSD 415
LV G LP D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 31/282 (10%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
SL+ I+ +G+ + NG +AIK +K ++ + A+IM +++H
Sbjct: 10 SLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKP---GTMSPESFLEEAQIMK--KLKHD 64
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
+V L A +V + +V+E+M GSLL+ L D +GR L+ +A + +G+ Y+
Sbjct: 65 KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKD-GEGR-ALKLPNLVDMAAQVAAGMAYI 121
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY 385
R IHR++ +++L+ + + +IADFGLARL+ D + + APE
Sbjct: 122 E---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQG-AKFPIKWTAPEA 177
Query: 386 HQTLKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAID 444
+F+ K D++SFG+LL LV G++P + + R R + P
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCP----- 232
Query: 445 SKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ + ++ C DPEERP + ++S L D
Sbjct: 233 ------------ISLHELMIHCWKKDPEERPTFEYLQSFLED 262
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 17/191 (8%)
Query: 228 NGKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
GK +A++ + Q+++S L R+VR IM + H NIV L + LV E
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVR--IMKV--LNHPNIVKLFEVIETEKTLYLVME 93
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G + + L V+ GR + E AR + R IVS ++Y H + I+HR++ ++L+
Sbjct: 94 YASGGEVFDYL--VAHGRMK-EKEARAKF-RQIVSAVQYCH---QKFIVHRDLKAENLLL 146
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLL 404
D DM +IADFG + G+ G+ Y APE Q K+ + D++S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 405 AVLVMGKLPSD 415
LV G LP D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 92/181 (50%), Gaps = 12/181 (6%)
Query: 237 VKQVDNSLLN-IKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEI 295
VK +D + LN ++++ E+ + H NIV L + LV E+ G + +
Sbjct: 45 VKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 104
Query: 296 LNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
L V+ GR + E AR + R IVS ++Y H + I+HR++ ++L+D DM +IAD
Sbjct: 105 L--VAHGRMK-EKEARAKF-RQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIAD 157
Query: 356 FGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPS 414
FG + G+ G+ Y APE Q K+ + D++S GV+L LV G LP
Sbjct: 158 FGFSNEFTVGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
Query: 415 D 415
D
Sbjct: 215 D 215
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 136/280 (48%), Gaps = 41/280 (14%)
Query: 210 KIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVP 269
K+ S A G++++ E S + + +K ++ + M Q+ AEI + H NI+
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERV----IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 270 LLAHMVRPDCH--LLVSEFMKNGSLLE-ILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+ V D H +V E + G LLE I++ ++G+ E + + +++ L Y H
Sbjct: 85 IFE--VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA-ELMKQMMNALAYFH 141
Query: 327 MYHRPRIIHRNITPSSVLIDD---DMEARIADFGLARLM-PDGHAQVSTSIVAGTVGYIA 382
H ++H+++ P ++L D +I DFGLA L D H ++ AGT Y+A
Sbjct: 142 SQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH----STNAAGTALYMA 194
Query: 383 PE-YHQTLKFSEKCDIYSFGVLLAVLVMGKLP-SDDFFQHTEEKSLVRWMRNVMTSENPN 440
PE + + + F KCDI+S GV++ L+ G LP + + ++K+ T + PN
Sbjct: 195 PEVFKRDVTF--KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA---------TYKEPN 243
Query: 441 RAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDV 480
A++ + L Q + +LK DPE RP++ V
Sbjct: 244 YAVECRPL----TPQAVDLLKQML---TKDPERRPSAAQV 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 12/190 (6%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
G+M+AIK + D + L + +++ EI +RH++I L + + +V E+
Sbjct: 34 TGEMVAIKIM---DKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYC 90
Query: 288 KNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDD 347
G L + + +SQ R E + R IVS + Y+H HR++ P ++L D+
Sbjct: 91 PGGELFDYI--ISQDRLSEE--ETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDE 143
Query: 348 DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAV 406
+ ++ DFGL P G+ G++ Y APE Q + + D++S G+LL V
Sbjct: 144 YHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYV 202
Query: 407 LVMGKLPSDD 416
L+ G LP DD
Sbjct: 203 LMCGFLPFDD 212
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 17/191 (8%)
Query: 228 NGKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
G+ +AIK + Q++ + L R+VR IM + H NIV L + L+ E
Sbjct: 39 TGREVAIKIIDKTQLNPTSLQKLFREVR--IMKI--LNHPNIVKLFEVIETEKTLYLIME 94
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G + + L V+ GR + E AR + R IVS ++Y H + RI+HR++ ++L+
Sbjct: 95 YASGGEVFDYL--VAHGRMK-EKEARSKF-RQIVSAVQYCH---QKRIVHRDLKAENLLL 147
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLL 404
D DM +IADFG + G G Y APE Q K+ + D++S GV+L
Sbjct: 148 DADMNIKIADFGFSNEFTVGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 405 AVLVMGKLPSD 415
LV G LP D
Sbjct: 205 YTLVSGSLPFD 215
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 51 NIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 108
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 109 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 221 W-KEKKTYLNPWKKIDSAPLA 240
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 17/191 (8%)
Query: 228 NGKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
GK +A++ + Q+++S L R+VR IM + H NIV L + LV E
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVR--IMKV--LNHPNIVKLFEVIETEKTLYLVME 93
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G + + L V+ GR + E AR + R IVS ++Y H + I+HR++ ++L+
Sbjct: 94 YASGGEVFDYL--VAHGRMK-EKEARAKF-RQIVSAVQYCH---QKFIVHRDLKAENLLL 146
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLL 404
D DM +IADFG + G+ G+ Y APE Q K+ + D++S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGN---KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 405 AVLVMGKLPSD 415
LV G LP D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 34/279 (12%)
Query: 210 KIRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
K+ GE+++ NG +AIK +K ++ + A++M ++RH +V
Sbjct: 25 KLGQGCFGEVWMGTW---NGTTRVAIKTLKP---GTMSPEAFLQEAQVMK--KLRHEKLV 76
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L A +V + +V E+M G LL+ L L L +A I SG+ Y+
Sbjct: 77 QLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD--MAAQIASGMAYVE-- 131
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
R +HR++ +++L+ +++ ++ADFGLARL+ D + + APE
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALY 189
Query: 389 LKFSEKCDIYSFGVLLAVLVM-GKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKL 447
+F+ K D++SFG+LL L G++P + R R E P D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD--- 246
Query: 448 LGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
+ C C DPEERP + +++ L D
Sbjct: 247 --------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 116/221 (52%), Gaps = 16/221 (7%)
Query: 193 KEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQV 252
+E+L F + LEK+ G +Y A+ +S G+++A+K+++ +D I +
Sbjct: 11 RENLYFQGLMEKYQKLEKVGEGTYGVVYKAK--DSQGRIVALKRIR-LDAEDEGIPSTAI 67
Query: 253 RAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEW-LAR 311
R EI ++ H NIV L+ + C LV EFM+ L ++L++ G ++ + +
Sbjct: 68 R-EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYL 125
Query: 312 HRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVST 371
+++ RG+ H+ RI+HR++ P ++LI+ D ++ADFGLAR G S
Sbjct: 126 YQLLRGVAHC-------HQHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSY 176
Query: 372 SIVAGTVGYIAPE-YHQTLKFSEKCDIYSFGVLLAVLVMGK 411
+ T+ Y AP+ + K+S DI+S G + A ++ GK
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 18/208 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L+ +++ GE L + G +A+K +K + + AE Q+RH N+
Sbjct: 23 LKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKN------DATAQAFLAEASVMTQLRHSNL 76
Query: 268 VPLLAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
V LL +V L +V+E+M GSL++ L S+GR L + + + +EYL
Sbjct: 77 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ +HR++ +VL+ +D A+++DFGL + A + V + APE
Sbjct: 135 GNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEAL 186
Query: 387 QTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
+ KFS K D++SFG+LL + G++P
Sbjct: 187 REKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 116/221 (52%), Gaps = 16/221 (7%)
Query: 193 KEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQV 252
+E+L F + LEK+ G +Y A+ +S G+++A+K+++ +D I +
Sbjct: 11 RENLYFQGLMEKYQKLEKVGEGTYGVVYKAK--DSQGRIVALKRIR-LDAEDEGIPSTAI 67
Query: 253 RAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEW-LAR 311
R EI ++ H NIV L+ + C LV EFM+ L ++L++ G ++ + +
Sbjct: 68 R-EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYL 125
Query: 312 HRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVST 371
+++ RG+ H+ RI+HR++ P ++LI+ D ++ADFGLAR G S
Sbjct: 126 YQLLRGVAHC-------HQHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSY 176
Query: 372 SIVAGTVGYIAPE-YHQTLKFSEKCDIYSFGVLLAVLVMGK 411
+ T+ Y AP+ + K+S DI+S G + A ++ GK
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 18/208 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L+ +++ GE L + G +A+K +K + + AE Q+RH N+
Sbjct: 8 LKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKN------DATAQAFLAEASVMTQLRHSNL 61
Query: 268 VPLLAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
V LL +V L +V+E+M GSL++ L S+GR L + + + +EYL
Sbjct: 62 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLE 119
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ +HR++ +VL+ +D A+++DFGL + A + V + APE
Sbjct: 120 GNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEAL 171
Query: 387 QTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
+ KFS K D++SFG+LL + G++P
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 210 KIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVP 269
K+ GE+Y+ + + +A+K +K+ +++ + E +I+H N+V
Sbjct: 39 KLGGGQYGEVYVG-VWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQ 92
Query: 270 LLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYH 329
LL +V+E+M G+LL+ L + + R E+ + +A I S +EYL
Sbjct: 93 LLGVCTLEPPFYIVTEYMPYGNLLDYLRECN--REEVTAVVLLYMATQISSAMEYLE--- 147
Query: 330 RPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL 389
+ IHR++ + L+ ++ ++ADFGL+RLM G + + + + APE
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN 206
Query: 390 KFSEKCDIYSFGVLL---AVLVMGKLPSDDFFQ 419
FS K D+++FGVLL A M P D Q
Sbjct: 207 TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 239
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + + R +E GQ H N++ L + + ++
Sbjct: 55 KLPGKREIFVAIKTLK---SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI 111
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
++EFM+NGSL L Q + + + RGI +G++YL + +HR++ +
Sbjct: 112 ITEFMENGSLDSFLR---QNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARN 165
Query: 343 VLIDDDMEARIADFGLARLMPDGHAQVS-TSIVAGTVG--YIAPEYHQTLKFSEKCDIYS 399
+L++ ++ +++DFGL+R + D + + TS + G + + APE Q KF+ D++S
Sbjct: 166 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 225
Query: 400 FGVLL-AVLVMGKLPSDD 416
+G+++ V+ G+ P D
Sbjct: 226 YGIVMWEVMSYGERPYWD 243
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 17/190 (8%)
Query: 229 GKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
GK +A+K + Q+++S L R+VR + + H NIV L + LV E+
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKV----LNHPNIVKLFEVIETEKTLYLVXEY 94
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
G + + L V+ GR + E AR + R IVS ++Y H + I+HR++ ++L+D
Sbjct: 95 ASGGEVFDYL--VAHGRXK-EKEARAKF-RQIVSAVQYCH---QKFIVHRDLKAENLLLD 147
Query: 347 DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLA 405
D +IADFG + G+ G Y APE Q K+ + D++S GV+L
Sbjct: 148 ADXNIKIADFGFSNEFTFGN---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 406 VLVMGKLPSD 415
LV G LP D
Sbjct: 205 TLVSGSLPFD 214
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 49 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 106
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 107 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 160
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 218
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 219 W-KEKKTYLNPWKKIDSAPLA 238
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 12/167 (7%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLA 310
++ EI +RH +I+ L + D ++V E+ N E+ + + Q + E A
Sbjct: 60 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQEA 115
Query: 311 RHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
R R + I+S +EY H R +I+HR++ P ++L+D+ + +IADFGL+ +M DG+ +
Sbjct: 116 R-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF-LK 170
Query: 371 TSIVAGTVGYIAPEY-HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
TS G+ Y APE L + D++S GV+L V++ +LP DD
Sbjct: 171 TS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 108
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 109 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 221 W-KEKKTYLNPWKKIDSAPLA 240
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 12/167 (7%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLA 310
++ EI +RH +I+ L + D ++V E+ N E+ + + Q + E A
Sbjct: 59 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQEA 114
Query: 311 RHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
R R + I+S +EY H R +I+HR++ P ++L+D+ + +IADFGL+ +M DG+ +
Sbjct: 115 R-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF-LK 169
Query: 371 TSIVAGTVGYIAPEY-HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
TS G+ Y APE L + D++S GV+L V++ +LP DD
Sbjct: 170 TS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 108
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 109 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 221 W-KEKKTYLNPWKKIDSAPLA 240
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 12/167 (7%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLA 310
++ EI +RH +I+ L + D ++V E+ N E+ + + Q + E A
Sbjct: 50 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQEA 105
Query: 311 RHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
R R + I+S +EY H R +I+HR++ P ++L+D+ + +IADFGL+ +M DG+ +
Sbjct: 106 R-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF-LK 160
Query: 371 TSIVAGTVGYIAPEY-HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
TS G+ Y APE L + D++S GV+L V++ +LP DD
Sbjct: 161 TS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 108
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 109 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 221 W-KEKKTYLNPWKKIDSAPLA 240
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 22/210 (10%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L+ +++ GE L + G +A+K +K + + AE Q+RH N+
Sbjct: 195 LKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKN------DATAQAFLAEASVMTQLRHSNL 248
Query: 268 VPLLAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
V LL +V L +V+E+M GSL++ L S+GR L + + + +EYL
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAG--TVGYIAPE 384
+ +HR++ +VL+ +D A+++DFGL + + S++ G V + APE
Sbjct: 307 GNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPE 356
Query: 385 YHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
+ KFS K D++SFG+LL + G++P
Sbjct: 357 ALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 106/191 (55%), Gaps = 13/191 (6%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
+ G+ +A+K + + + +++ R + EI +RH +I+ L + D ++V E+
Sbjct: 31 TTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 89
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
N E+ + + Q + E AR R + I+S +EY H R +I+HR++ P ++L+D
Sbjct: 90 AGN----ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLD 141
Query: 347 DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQTLKFSEKCDIYSFGVLLA 405
+ + +IADFGL+ +M DG+ + TS G+ Y APE L + D++S GV+L
Sbjct: 142 EHLNVKIADFGLSNIMTDGNF-LKTS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILY 198
Query: 406 VLVMGKLPSDD 416
V++ +LP DD
Sbjct: 199 VMLCRRLPFDD 209
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 134/306 (43%), Gaps = 57/306 (18%)
Query: 186 IFSP--LIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNS 243
IF P LI E L + C K+ R +GE+ + +K++ + D
Sbjct: 6 IFRPSDLIHGEVLG----KGCFGQAIKVTHRETGEV------------MVMKELIRFDEE 49
Query: 244 LLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR 303
+++V+ +M + H N++ + + + ++E++K G+L I+ +
Sbjct: 50 TQRTFLKEVK--VMRC--LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS-- 103
Query: 304 RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP 363
+ W R A+ I SG+ YLH + IIHR++ + L+ ++ +ADFGLARLM
Sbjct: 104 -QYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMV 159
Query: 364 DGHAQV------------STSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGK 411
D Q V G ++APE + EK D++SFG++L ++ G+
Sbjct: 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GR 218
Query: 412 LPSD-DFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDD 470
+ +D D+ T + L +R + P S + + C C L D
Sbjct: 219 VNADPDYLPRTMDFGLN--VRGFLDRYCPPNCPPS-----------FFPITVRC-CDL-D 263
Query: 471 PEERPN 476
PE+RP+
Sbjct: 264 PEKRPS 269
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 108
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 109 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 221 W-KEKKTYLNPWKKIDSAPLA 240
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 108
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 109 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 221 W-KEKKTYLNPWKKIDSAPLA 240
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 108
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 109 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 221 W-KEKKTYLNPWKKIDSAPLA 240
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 228 NGKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
GK +A+K + Q+++S L R+VR IM + H NIV L + LV E
Sbjct: 31 TGKEVAVKIIDKTQLNSSSLQKLFREVR--IMKV--LNHPNIVKLFEVIETEKTLYLVME 86
Query: 286 FMKNGSLLEILNDVSQG-RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
+ G + + L V+ G +E E A+ R IVS ++Y H + I+HR++ ++L
Sbjct: 87 YASGGEVFDYL--VAHGWMKEKEARAKFR---QIVSAVQYCH---QKFIVHRDLKAENLL 138
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVL 403
+D DM +IADFG + G+ G+ Y APE Q K+ + D++S GV+
Sbjct: 139 LDADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 195
Query: 404 LAVLVMGKLPSD 415
L LV G LP D
Sbjct: 196 LYTLVSGSLPFD 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 51 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 108
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 109 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 163 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 221 W-KEKKTYLNPWKKIDSAPLA 240
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 32/193 (16%)
Query: 230 KMIAIKKVKQVDN--SLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
K+I+ ++VKQ + SLL E+ Q+ H NI+ L LV E
Sbjct: 57 KVISKRQVKQKTDKESLLR--------EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVY 108
Query: 288 KNGSLL-EILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
G L EI++ R+ + RI R ++SG+ Y+H + +I+HR++ P ++L++
Sbjct: 109 TGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLE 160
Query: 347 D---DMEARIADFGLARLMPDGHAQVSTSIV--AGTVGYIAPEY-HQTLKFSEKCDIYSF 400
D RI DFGL+ H + S + GT YIAPE H T + EKCD++S
Sbjct: 161 SKSKDANIRIIDFGLST-----HFEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWST 213
Query: 401 GVLLAVLVMGKLP 413
GV+L +L+ G P
Sbjct: 214 GVILYILLSGCPP 226
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWL 309
++ EI + H N+V H + L E+ G L + I D+ + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-- 107
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
R +++G+ YLH I HR+I P ++L+D+ +I+DFGLA + + +
Sbjct: 108 ---RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 370 STSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ + GT+ Y+APE + +F +E D++S G++L ++ G+LP D +E S
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYS--D 219
Query: 429 WMRNVMTSENPNRAIDSKLLG 449
W + T NP + IDS L
Sbjct: 220 W-KEKKTYLNPWKKIDSAPLA 239
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 32/193 (16%)
Query: 230 KMIAIKKVKQVDN--SLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
K+I+ ++VKQ + SLL E+ Q+ H NI+ L LV E
Sbjct: 80 KVISKRQVKQKTDKESLLR--------EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVY 131
Query: 288 KNGSLL-EILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
G L EI++ R+ + RI R ++SG+ Y+H + +I+HR++ P ++L++
Sbjct: 132 TGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLE 183
Query: 347 D---DMEARIADFGLARLMPDGHAQVSTSIV--AGTVGYIAPEY-HQTLKFSEKCDIYSF 400
D RI DFGL+ H + S + GT YIAPE H T + EKCD++S
Sbjct: 184 SKSKDANIRIIDFGLST-----HFEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWST 236
Query: 401 GVLLAVLVMGKLP 413
GV+L +L+ G P
Sbjct: 237 GVILYILLSGCPP 249
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + + R +E GQ H N++ L + + ++
Sbjct: 29 KLPGKREIFVAIKTLK---SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI 85
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
++EFM+NGSL L Q + + + RGI +G++YL + +HR + +
Sbjct: 86 ITEFMENGSLDSFLR---QNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRALAARN 139
Query: 343 VLIDDDMEARIADFGLARLMPDGHAQVS-TSIVAGTVG--YIAPEYHQTLKFSEKCDIYS 399
+L++ ++ +++DFGL+R + D + + TS + G + + APE Q KF+ D++S
Sbjct: 140 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 199
Query: 400 FGVLL-AVLVMGKLPSDD 416
+G+++ V+ G+ P D
Sbjct: 200 YGIVMWEVMSYGERPYWD 217
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 32/193 (16%)
Query: 230 KMIAIKKVKQVDN--SLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
K+I+ ++VKQ + SLL E+ Q+ H NI+ L LV E
Sbjct: 81 KVISKRQVKQKTDKESLLR--------EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVY 132
Query: 288 KNGSLL-EILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
G L EI++ R+ + RI R ++SG+ Y+H + +I+HR++ P ++L++
Sbjct: 133 TGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLE 184
Query: 347 D---DMEARIADFGLARLMPDGHAQVSTSIV--AGTVGYIAPEY-HQTLKFSEKCDIYSF 400
D RI DFGL+ H + S + GT YIAPE H T + EKCD++S
Sbjct: 185 SKSKDANIRIIDFGLST-----HFEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWST 237
Query: 401 GVLLAVLVMGKLP 413
GV+L +L+ G P
Sbjct: 238 GVILYILLSGCPP 250
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L+ +++ GE L + G +A+K +K + + AE Q+RH N+
Sbjct: 14 LKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKN------DATAQAFLAEASVMTQLRHSNL 67
Query: 268 VPLLAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
V LL +V L +V+E+M GSL++ L S+GR L + + + +EYL
Sbjct: 68 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ +HR++ +VL+ +D A+++DFGL + A + V + APE
Sbjct: 126 GNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEAL 177
Query: 387 QTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
+ FS K D++SFG+LL + G++P
Sbjct: 178 REAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 31/271 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVR 276
GE+++ +N +A+K +K ++++ A +M ++H +V L A + R
Sbjct: 27 GEVWMGYY--NNSTKVAVKTLKP---GTMSVQAFLEEANLMKT--LQHDKLVRLYAVVTR 79
Query: 277 PDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
+ +++E+M GSLL+ L G+ L L + I G+ Y+ R IHR
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID--FSAQIAEGMAYIE---RKNYIHR 134
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
++ ++VL+ + + +IADFGLAR++ D + + APE F+ K D
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG-AKFPIKWTAPEAINFGCFTIKSD 193
Query: 397 IYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQ 455
++SFG+LL ++ GK+P +L + R P+ D
Sbjct: 194 VWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYD----------- 242
Query: 456 MLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
I C + EERP ++S+L D
Sbjct: 243 ------IMKMCWKEKAEERPTFDYLQSVLDD 267
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 32/193 (16%)
Query: 230 KMIAIKKVKQVDN--SLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
K+I+ ++VKQ + SLL E+ Q+ H NI+ L LV E
Sbjct: 63 KVISKRQVKQKTDKESLLR--------EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVY 114
Query: 288 KNGSLL-EILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
G L EI++ R+ + RI R ++SG+ Y+H + +I+HR++ P ++L++
Sbjct: 115 TGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLE 166
Query: 347 D---DMEARIADFGLARLMPDGHAQVSTSIV--AGTVGYIAPEY-HQTLKFSEKCDIYSF 400
D RI DFGL+ H + S + GT YIAPE H T + EKCD++S
Sbjct: 167 SKSKDANIRIIDFGLST-----HFEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWST 219
Query: 401 GVLLAVLVMGKLP 413
GV+L +L+ G P
Sbjct: 220 GVILYILLSGCPP 232
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 209 EKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
E + + A E+ +AE ++ GK+ A+K + + L K + EI +I+H NIV
Sbjct: 28 ETLGTGAFSEVVLAE-EKATGKLFAVKCIPK---KALKGKESSIENEIAVLRKIKHENIV 83
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L P+ LV + + G L + + V +G + + I L+ ++
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRI--VEKG-----FYTEKDASTLIRQVLDAVYYL 136
Query: 329 HRPRIIHRNITPSSVLI---DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY 385
HR I+HR++ P ++L D++ + I+DFGL+++ +G V S GT GY+APE
Sbjct: 137 HRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDV-MSTACGTPGYVAPEV 193
Query: 386 HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
+S+ D +S GV+ +L+ G P D
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 224
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 25/254 (9%)
Query: 193 KEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQV 252
+E+L F D ++K+ S A GE+ + + + G AIK +K+ + + +
Sbjct: 11 RENLYFQGLSDRYQRVKKLGSGAYGEVLLCK-DKLTGAERAIKIIKKSSVTTTS-NSGAL 68
Query: 253 RAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLL-EILNDVSQGRRELEWLAR 311
E+ Q+ H NI+ L + LV E + G L EI+ R++ +
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL-----RQKFSEVDA 123
Query: 312 HRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDD---DMEARIADFGLARLMPDGHAQ 368
I + ++SG YLH ++ I+HR++ P ++L++ D +I DFGL+ H +
Sbjct: 124 AVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS-----AHFE 175
Query: 369 VSTSIVA--GTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
V + GT YIAPE + K+ EKCD++S GV+L +L+ G P F T+++ L
Sbjct: 176 VGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP---FGGQTDQEIL 231
Query: 427 VRWMRNVMTSENPN 440
R + + + P+
Sbjct: 232 KRVEKGKFSFDPPD 245
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 14/219 (6%)
Query: 200 EKEDCSASLEKI-RSRASGEIYIAEL--PESNGKMIAIKKVKQVDNSLLNIKMRQVRAEI 256
E E +EKI S SGE+ L P +AIK +K + R +E
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKA---GYTERQRRDFLSEA 101
Query: 257 MTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIAR 316
GQ H NI+ L + R ++V+E+M+NGSL L G+ + L + R
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQLVG--MLR 158
Query: 317 GIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVA 375
G+ +G+ YL +HR++ +VL+D ++ +++DFGL+R++ D A +T+
Sbjct: 159 GVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 376 GTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
+ + APE FS D++SFGV++ VL G+ P
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 14/219 (6%)
Query: 200 EKEDCSASLEKI-RSRASGEIYIAEL--PESNGKMIAIKKVKQVDNSLLNIKMRQVRAEI 256
E E +EKI S SGE+ L P +AIK +K + R +E
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKA---GYTERQRRDFLSEA 101
Query: 257 MTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIAR 316
GQ H NI+ L + R ++V+E+M+NGSL L G+ + L + R
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQLVG--MLR 158
Query: 317 GIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVA 375
G+ +G+ YL +HR++ +VL+D ++ +++DFGL+R++ D A +T+
Sbjct: 159 GVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 376 GTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
+ + APE FS D++SFGV++ VL G+ P
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 230 KMIAIKKVKQVDN--SLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
K+I+ ++VKQ + SLL E+ Q+ H NI L LV E
Sbjct: 57 KVISKRQVKQKTDKESLLR--------EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVY 108
Query: 288 KNGSLL-EILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
G L EI++ R+ + RI R ++SG+ Y H + +I+HR++ P ++L++
Sbjct: 109 TGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLE 160
Query: 347 D---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQTLKFSEKCDIYSFGV 402
D RI DFGL+ A GT YIAPE H T + EKCD++S GV
Sbjct: 161 SKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGV 215
Query: 403 LLAVLVMGKLP 413
+L +L+ G P
Sbjct: 216 ILYILLSGCPP 226
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
++K+ + GE+++ +N +A+K +K ++++ A +M ++H +
Sbjct: 17 VKKLGAGQFGEVWMGYY--NNSTKVAVKTLKP---GTMSVQAFLEEANLMKT--LQHDKL 69
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V L A + + + +++EFM GSLL+ L G+ L L + I G+ Y+
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLID--FSAQIAEGMAYIE- 126
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
R IHR++ ++VL+ + + +IADFGLAR++ D + + APE
Sbjct: 127 --RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG-AKFPIKWTAPEAIN 183
Query: 388 TLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSK 446
F+ K +++SFG+LL ++ GK+P +L + R P+ D
Sbjct: 184 FGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYD-- 241
Query: 447 LLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
++K+ C + EERP ++S+L D
Sbjct: 242 ------------IMKM---CWKEKAEERPTFDYLQSVLDD 266
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 211 IRSRASGEIYIAELPESNGKM-IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVP 269
++ SG+ + +L + G+ +A+K +K + S+ + Q E T ++ H +V
Sbjct: 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIK--EGSMSEDEFFQ---EAQTMMKLSHPKLVK 67
Query: 270 LLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYH 329
+ +V+E++ NG LL L +G + L + + G+ +L +
Sbjct: 68 FYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL---EMCYDVCEGMAFLESH- 123
Query: 330 RPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL 389
+ IHR++ + L+D D+ +++DFG+ R + D VS+ V + APE
Sbjct: 124 --QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VSSVGTKFPVKWSAPEVFHYF 180
Query: 390 KFSEKCDIYSFGVLL-AVLVMGKLPSD 415
K+S K D+++FG+L+ V +GK+P D
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 27/198 (13%)
Query: 229 GKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMK 288
G +A+K + + ++ + VR E ++H NI+ L ++ LV EF +
Sbjct: 30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
Query: 289 NGSLLEILNDVSQGRR-----ELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSV 343
G L N V G+R + W A I G+ YLH IIHR++ S++
Sbjct: 90 GGPL----NRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIVPIIHRDLKSSNI 139
Query: 344 LIDDDME--------ARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
LI +E +I DFGLAR + H S AG ++APE + FS+
Sbjct: 140 LILQKVENGDLSNKILKITDFGLAR---EWHRTTKMS-AAGAYAWMAPEVIRASMFSKGS 195
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S+GVLL L+ G++P
Sbjct: 196 DVWSYGVLLWELLTGEVP 213
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 23/194 (11%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIR-------HRNIVPLLAHMVRPD-CH-LL 282
I K V + N +K+ R E T +I H NIV L H V D H L
Sbjct: 26 ICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKL--HEVFHDQLHTFL 83
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V E + G L E + + ++ I R +VS + ++H ++HR++ P +
Sbjct: 84 VMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPEN 136
Query: 343 VLI---DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYS 399
+L +D++E +I DFG ARL P + + T T+ Y APE + E CD++S
Sbjct: 137 LLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQNGYDESCDLWS 194
Query: 400 FGVLLAVLVMGKLP 413
GV+L ++ G++P
Sbjct: 195 LGVILYTMLSGQVP 208
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 249 MRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEW 308
+++V+ E+ Q++H +I+ L + + LV E NG + L + + E E
Sbjct: 55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENE- 113
Query: 309 LARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQ 368
ARH + + I++G+ YLH + I+HR++T S++L+ +M +IADFGLA + H +
Sbjct: 114 -ARHFMHQ-IITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK 168
Query: 369 VSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSD 415
T + GT YI+PE + D++S G + L++G+ P D
Sbjct: 169 HYT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 27/240 (11%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
++K+ S A GE+ + + + G AIK +K+ + + + E+ Q+ H NI
Sbjct: 9 VKKLGSGAYGEVLLCK-DKLTGAERAIKIIKKSSVTTTS-NSGALLDEVAVLKQLDHPNI 66
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLE--ILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
+ L + LV E + G L + IL R++ + I + ++SG YL
Sbjct: 67 MKLYEFFEDKRNYYLVMEVYRGGELFDEIIL------RQKFSEVDAAVIMKQVLSGTTYL 120
Query: 326 HMYHRPRIIHRNITPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVA--GTVGY 380
H ++ I+HR++ P ++L++ D +I DFGL+ H +V + GT Y
Sbjct: 121 HKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS-----AHFEVGGKMKERLGTAYY 172
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPN 440
IAPE + K+ EKCD++S GV+L +L+ G P F T+++ L R + + + P+
Sbjct: 173 IAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP---FGGQTDQEILKRVEKGKFSFDPPD 228
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
EKI ASG +Y A + + G+ +AI+++ N K + EI+ + ++ NI
Sbjct: 26 FEKIGQGASGTVYTA-MDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNI 80
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V L + D +V E++ GSL +++ + ++ + R + LE+LH
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRECLQALEFLH- 134
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGL-ARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
++IHRNI ++L+ D ++ DFG A++ P+ Q S + GT ++APE
Sbjct: 135 --SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSTMVGTPYWMAPEVV 189
Query: 387 QTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ K DI+S G++ ++ G+ P
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 15/224 (6%)
Query: 194 EDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVR 253
ED + E+ LEK+ + G +Y A + + G+++AIK+V V++ L +++
Sbjct: 20 EDSLTKQPEEVFDVLEKLGEGSYGSVYKA-IHKETGQIVAIKQVP-VESDL-----QEII 72
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
EI Q ++V + +V E+ GS+ +I+ ++ E E
Sbjct: 73 KEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT--- 129
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
I + + GLEYLH R IHR+I ++L++ + A++ADFG+A + D A+ +
Sbjct: 130 ILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK--RNX 184
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDF 417
V GT ++APE Q + ++ DI+S G+ + GK P D
Sbjct: 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 19/172 (11%)
Query: 249 MRQVRAEIMTAGQIRHRNIVPLLAHMVRP--DCHLLVSEFMKNGSLLEI--LNDVSQGRR 304
+ QV EI ++ H N+V L+ + P D +V E + G ++E+ L +S+ +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 305 ELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD 364
+ + ++ G+EYLH +IIHR+I PS++L+ +D +IADFG++
Sbjct: 140 RFYF-------QDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 365 GHAQVSTSIVAGTVGYIAPE-YHQTLK-FSEKC-DIYSFGVLLAVLVMGKLP 413
A +S ++ GT ++APE +T K FS K D+++ GV L V G+ P
Sbjct: 190 SDALLSNTV--GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 24/247 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+A+K +K VD + + + R E+ + RH NI+ + +M + D +V+++ + S
Sbjct: 61 VAVKILKVVDPT--PEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSS 117
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
L + L+ V + + ++ L IAR G++YLH IIHR++ +++ + + +
Sbjct: 118 LYKHLH-VQETKFQMFQLID--IARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTV 171
Query: 352 RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLV 408
+I DFGLA + G+V ++APE FS + D+YS+G++L L+
Sbjct: 172 KIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM 231
Query: 409 MGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTL 468
G+LP + H + + +M R S L Y+ + ++ C
Sbjct: 232 TGELP----YSHINNRDQIIFM--------VGRGYASPDLSKLYKNCPKAMKRLVADCVK 279
Query: 469 DDPEERP 475
EERP
Sbjct: 280 KVKEERP 286
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H N+V L + R ++
Sbjct: 65 KLPGKRDVAVAIKTLKV---GYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMI 121
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V EFM+NG+L L ++ + + RGI +G+ YL +HR++ +
Sbjct: 122 VIEFMENGALDAFLRKHDGQFTVIQLVG---MLRGIAAGMRYLADMG---YVHRDLAARN 175
Query: 343 VLIDDDMEARIADFGLARLMPDGHAQVSTSIVAG-TVGYIAPEYHQTLKFSEKCDIYSFG 401
+L++ ++ +++DFGL+R++ D V T+ V + APE Q KF+ D++S+G
Sbjct: 176 ILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYG 235
Query: 402 VLL-AVLVMGKLPSDD 416
+++ V+ G+ P D
Sbjct: 236 IVMWEVMSYGERPYWD 251
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 67 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E+M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---YVHRDLAARN 177
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGLAR++ D A +T + + +PE KF+ D++S+G
Sbjct: 178 ILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 238 IVLWEVMSYGERP 250
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 38/262 (14%)
Query: 229 GKMIAIKKVK-QVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
K +AIK+++ + + +++RQ+ ++ H NIV L + P C LV E+
Sbjct: 32 AKDVAIKQIESESERKAFIVELRQL-------SRVNHPNIVKLYGACLNPVC--LVMEYA 82
Query: 288 KNGSLLEILNDVSQGRRELEWL-ARHRIARGI--VSGLEYLHMYHRPRIIHRNITPSSVL 344
+ GSL +L+ G L + A H ++ + G+ YLH +IHR++ P ++L
Sbjct: 83 EGGSLYNVLH----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 138
Query: 345 -IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVL 403
+ +I DFG A + Q + G+ ++APE + +SEKCD++S+G++
Sbjct: 139 LVAGGTVLKICDFGTACDI-----QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGII 193
Query: 404 LAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIA 463
L ++ + P D+ R + N R K L E M
Sbjct: 194 LWEVITRRKPFDEIGGPA--------FRIMWAVHNGTRPPLIKNLPKPIESLMTR----- 240
Query: 464 CFCTLDDPEERPNSKDVRSMLS 485
C DP +RP+ +++ +++
Sbjct: 241 --CWSKDPSQRPSMEEIVKIMT 260
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 27 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 81
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G + + L +S+ R A I L H R+
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKLSK-------FDEQRTATYITELANALSYCHSKRV 134
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDE 190
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 38/262 (14%)
Query: 229 GKMIAIKKVK-QVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
K +AIK+++ + + +++RQ+ ++ H NIV L + P C LV E+
Sbjct: 31 AKDVAIKQIESESERKAFIVELRQL-------SRVNHPNIVKLYGACLNPVC--LVMEYA 81
Query: 288 KNGSLLEILNDVSQGRRELEWL-ARHRIARGI--VSGLEYLHMYHRPRIIHRNITPSSVL 344
+ GSL +L+ G L + A H ++ + G+ YLH +IHR++ P ++L
Sbjct: 82 EGGSLYNVLH----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137
Query: 345 -IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVL 403
+ +I DFG A Q + G+ ++APE + +SEKCD++S+G++
Sbjct: 138 LVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGII 192
Query: 404 LAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIA 463
L ++ + P D+ R + N R K L E M
Sbjct: 193 LWEVITRRKPFDEIGGPA--------FRIMWAVHNGTRPPLIKNLPKPIESLMTR----- 239
Query: 464 CFCTLDDPEERPNSKDVRSMLS 485
C DP +RP+ +++ +++
Sbjct: 240 --CWSKDPSQRPSMEEIVKIMT 259
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 199 LEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMT 258
++ E+ L++I + GE+Y + +++AIK +D ++ ++ EI
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKG-IDNHTKEVVAIK---IIDLEEAEDEIEDIQQEITV 70
Query: 259 AGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGI 318
Q I ++ ++ E++ GS L++L G E ++A I R I
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK---PGPLEETYIAT--ILREI 125
Query: 319 VSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTV 378
+ GL+YLH R IHR+I ++VL+ + + ++ADFG+A + D Q+ + GT
Sbjct: 126 LKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTP 180
Query: 379 GYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDF 417
++APE + + K DI+S G+ L G+ P+ D
Sbjct: 181 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLL-EILNDVSQGRRELEWLARHR 313
E+ + H NI+ L + LV E K G L EI++ R + +
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH-----RMKFNEVDAAV 140
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDD---DMEARIADFGLARLMPDGHAQVS 370
I + ++SG+ YLH ++ I+HR++ P ++L++ D +I DFGL+ + + Q
Sbjct: 141 IIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN---QKK 194
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWM 430
GT YIAPE + K+ EKCD++S GV+L +L+ G P F T+++ L +
Sbjct: 195 MKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPP---FGGQTDQEILRKVE 250
Query: 431 RNVMTSENP 439
+ T ++P
Sbjct: 251 KGKYTFDSP 259
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 67 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E+M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---FVHRDLAARN 177
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + +PE KF+ D++S+G
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 238 IVLWEVMSYGERP 250
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 39 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 93
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 94 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 146
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDE 202
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHT 421
K D++S GVL ++GK P + + +Q T
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEANTYQET 231
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 27 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 81
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 134
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEXIEGRXHDE 190
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 32/240 (13%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQV----DNSLLNIKMRQVRAEIMTAGQIR 263
+E + S A E+++ + GK+ A+K +K+ D+SL N EI +I+
Sbjct: 14 MEVLGSGAFSEVFLVK-QRLTGKLFALKCIKKSPAFRDSSLEN--------EIAVLKKIK 64
Query: 264 HRNIVPLLAHMVRPDCHLLVSEFMKNGSLLE-ILNDVSQGRRELEWLARHRIARGIVSGL 322
H NIV L + LV + + G L + IL ++ + + ++S +
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS-----LVIQQVLSAV 119
Query: 323 EYLHMYHRPRIIHRNITPSSVLI---DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
+YLH I+HR++ P ++L +++ + I DFGL+++ +G S GT G
Sbjct: 120 KYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPG 172
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENP 439
Y+APE +S+ D +S GV+ +L+ G P F++ TE K + E+P
Sbjct: 173 YVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP---FYEETESKLFEKIKEGYYEFESP 229
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 38 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 94
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E+M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 95 VTEYMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---YVHRDLAARN 148
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + +PE KF+ D++S+G
Sbjct: 149 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 208
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 209 IVLWEVMSYGERP 221
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
EKI ASG +Y A + + G+ +AI+++ N K + EI+ + ++ NI
Sbjct: 25 FEKIGQGASGTVYTA-MDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNI 79
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V L + D +V E++ GSL +++ + ++ + R + LE+LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLH- 133
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGL-ARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
++IHR+I ++L+ D ++ DFG A++ P+ Q S + GT ++APE
Sbjct: 134 --SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSTMVGTPYWMAPEVV 188
Query: 387 QTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ K DI+S G++ ++ G+ P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 48 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 102
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 155
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDE 211
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHT 421
K D++S GVL ++GK P + + +Q T
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQET 240
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 67 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E+M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---YVHRDLAARN 177
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + +PE KF+ D++S+G
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 238 IVLWEVMSYGERP 250
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 23 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 77
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 130
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + ++GT+ Y+ PE + E
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSCHAPSSR----RTTLSGTLDYLPPEMIEGRMHDE 186
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 26 GNVYLAR--ERQSKFILALKVLFKTQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 80
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLAR---HRIARGIVSGLEYLHMYHR 330
L+ E+ G++ REL+ L+R R A I L H
Sbjct: 81 FHDATRVYLILEYAPLGTVY----------RELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 331 PRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK 390
R+IHR+I P ++L+ + E +IADFG + P + + GT+ Y+ PE +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRM 186
Query: 391 FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMT 435
EK D++S GVL ++G P F HT +++ R R T
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPP---FEAHTYQETYRRISRVEFT 228
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 19/192 (9%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMRQVRA---EIMTAGQIRHRNIVPLLAHMVRPDCHLLVS 284
NG+ A+K +K+ + ++++QV E + + H I+ + ++
Sbjct: 30 NGRYYAMKVLKKE----IVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
++++ G L +L + +R +A+ A + LEYLH II+R++ P ++L
Sbjct: 86 DYIEGGELFSLLR---KSQRFPNPVAKFYAAE-VCLALEYLH---SKDIIYRDLKPENIL 138
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+D + +I DFG A+ +PD T + GT YIAPE T +++ D +SFG+L+
Sbjct: 139 LDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILI 193
Query: 405 AVLVMGKLPSDD 416
++ G P D
Sbjct: 194 YEMLAGYTPFYD 205
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 67 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E+M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---YVHRDLAARN 177
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + +PE KF+ D++S+G
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 238 IVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 67 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E+M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---YVHRDLAARN 177
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + +PE KF+ D++S+G
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 238 IVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 65 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 121
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E+M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 122 VTEYMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---YVHRDLAARN 175
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + +PE KF+ D++S+G
Sbjct: 176 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 235
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 236 IVLWEVMSYGERP 248
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 67 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E+M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---YVHRDLAARN 177
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL R++ D A +T + + +PE KF+ D++S+G
Sbjct: 178 ILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 238 IVLWEVMSYGERP 250
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 25 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 79
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 132
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDE 188
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
EKI ASG +Y A + + G+ +AI+++ N K + EI+ + ++ NI
Sbjct: 25 FEKIGQGASGTVYTA-MDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNI 79
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V L + D +V E++ GSL +++ + ++ + R + LE+LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLH- 133
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGL-ARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
++IHR+I ++L+ D ++ DFG A++ P+ Q S + GT ++APE
Sbjct: 134 --SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSXMVGTPYWMAPEVV 188
Query: 387 QTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ K DI+S G++ ++ G+ P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 55 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 111
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E+M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 112 VTEYMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---YVHRDLAARN 165
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + +PE KF+ D++S+G
Sbjct: 166 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 225
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 226 IVLWEVMSYGERP 238
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 27 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 81
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 134
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDE 190
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 67 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E+M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---YVHRDLAARN 177
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + +PE KF+ D++S+G
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 238 IVLWEVMSYGERP 250
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRREL-EWLARHR 313
EI + H+++V D +V E + SLLE+ + R+ L E AR+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYY 144
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTS 372
+ R IV G +YLH R R+IHR++ ++ +++D+E +I DFGLA ++ DG +
Sbjct: 145 L-RQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---K 197
Query: 373 IVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
++ GT YIAPE S + D++S G ++ L++GK P
Sbjct: 198 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 199 LEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMT 258
L+ E+ LEKI + GE++ + K++AIK +D ++ ++ EI
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIK---IIDLEEAEDEIEDIQQEITV 58
Query: 259 AGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGI 318
Q + ++ ++ E++ GS L++L ++ I R I
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREI 113
Query: 319 VSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTV 378
+ GL+YLH + IHR+I ++VL+ + E ++ADFG+A + D Q+ + GT
Sbjct: 114 LKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTP 168
Query: 379 GYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDF 417
++APE + + K DI+S G+ L G+ P +
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRREL-EWLARHR 313
EI + H+++V D +V E + SLLE+ + R+ L E AR+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYY 120
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTS 372
+ R IV G +YLH R R+IHR++ ++ +++D+E +I DFGLA ++ DG +
Sbjct: 121 L-RQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---K 173
Query: 373 IVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
++ GT YIAPE S + D++S G ++ L++GK P
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 22 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 76
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 129
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDE 185
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
EKI ASG +Y A + + G+ +AI+++ N K + EI+ + ++ NI
Sbjct: 26 FEKIGQGASGTVYTA-MDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNI 80
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V L + D +V E++ GSL +++ + ++ + R + LE+LH
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRECLQALEFLH- 134
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGL-ARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
++IHR+I ++L+ D ++ DFG A++ P+ Q S + GT ++APE
Sbjct: 135 --SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSXMVGTPYWMAPEVV 189
Query: 387 QTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ K DI+S G++ ++ G+ P
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E N K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 22 GNVYLAR--EKNSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 76
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H ++
Sbjct: 77 FHDSTRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKKV 129
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPEMIEGRMHDE 185
Query: 394 KCDIYSFGVLLAVLVMGKLP 413
K D++S GVL ++GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRREL-EWLARHR 313
EI + H+++V D +V E + SLLE+ + R+ L E AR+
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYY 146
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTS 372
+ R IV G +YLH R R+IHR++ ++ +++D+E +I DFGLA ++ DG +
Sbjct: 147 L-RQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---K 199
Query: 373 IVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
++ GT YIAPE S + D++S G ++ L++GK P
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 194 EDLAF--LEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQ 251
E+L F ++ E+ LEKI + GE++ + K++AIK +D ++
Sbjct: 16 ENLYFQSMDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIK---IIDLEEAEDEIED 71
Query: 252 VRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLAR 311
++ EI Q + ++ ++ E++ GS L++L ++
Sbjct: 72 IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA---- 127
Query: 312 HRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVST 371
I R I+ GL+YLH + IHR+I ++VL+ + E ++ADFG+A + D Q+
Sbjct: 128 -TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKR 181
Query: 372 SIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDF 417
+ GT ++APE + + K DI+S G+ L G+ P +
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 199 LEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMT 258
L+ E+ LEKI + GE++ + K++AIK +D ++ ++ EI
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIK---IIDLEEAEDEIEDIQQEITV 58
Query: 259 AGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGI 318
Q + ++ ++ E++ GS L++L ++ I R I
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREI 113
Query: 319 VSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTV 378
+ GL+YLH + IHR+I ++VL+ + E ++ADFG+A + D Q+ + GT
Sbjct: 114 LKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTP 168
Query: 379 GYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDF 417
++APE + + K DI+S G+ L G+ P +
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 27 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 81
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G + + L +S+ R A I L H R+
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKLSK-------FDEQRTATYITELANALSYCHSKRV 134
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + GT+ Y+ PE + E
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLXGTLDYLPPEMIEGRMHDE 190
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 91/169 (53%), Gaps = 10/169 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + +P +V+++ + SL L+ S+ + E++
Sbjct: 51 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-ASETKFEMK 108
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
L IAR G++YLH IIHR++ +++ + +D +I DFGLA +
Sbjct: 109 KLID--IARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG 163
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
++G++ ++APE + +S + D+Y+FG++L L+ G+LP
Sbjct: 164 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 25 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 79
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 132
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 209 EKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
E I + GE+ L ++ GK + +K + + R+ +E GQ H NI+
Sbjct: 20 EVIGAGEFGEVCRGRL-KAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L + ++++EFM+NG+L L ++ G+ + L + RGI SG+ YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLV--GMLRGIASGMRYLAEM 135
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS-TSIVAGTVG--YIAPEY 385
+HR++ ++L++ ++ +++DFGL+R + + + + TS + G + + APE
Sbjct: 136 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 386 HQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ D +S+G+++ V+ G+ P D
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 224
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 21 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 75
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 76 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 128
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDE 184
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 216
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 25 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 79
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 132
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RAALCGTLDYLPPEMIEGRMHDE 188
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 26 GNVYLAR--ERQSKFILALKVLFKTQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 80
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLAR---HRIARGIVSGLEYLHMYHR 330
L+ E+ G++ REL+ L+R R A I L H
Sbjct: 81 FHDATRVYLILEYAPLGTVY----------RELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 331 PRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK 390
R+IHR+I P ++L+ + E +IADFG + P + GT+ Y+ PE +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT----LCGTLDYLPPEMIEGRM 186
Query: 391 FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMT 435
EK D++S GVL ++G P F HT +++ R R T
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPP---FEAHTYQETYRRISRVEFT 228
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + +P +V+++ + SL L+ + + E
Sbjct: 52 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFE 107
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
+ IAR G++YLH IIHR++ +++ + +D+ +I DFGLA +
Sbjct: 108 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
++G++ ++APE +S + D+Y+FG++L L+ G+LP +
Sbjct: 165 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 27/231 (11%)
Query: 208 LEKIRSRAS-GEIYIAELPESNGKMIAIKKVKQVDNSLLN--IKMRQVRAEIMTAGQIRH 264
L K+ + S G++++AE ++N + AIK +K+ D L++ ++ V +++ H
Sbjct: 21 LHKMLGKGSFGKVFLAEFKKTN-QFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAW-EH 77
Query: 265 RNIVPLLAHMV----RPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVS 320
P L HM + V E++ G L+ + Q + + A I+
Sbjct: 78 ----PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEIIL 129
Query: 321 GLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
GL++LH I++R++ ++L+D D +IADFG+ + G A+ T+ GT Y
Sbjct: 130 GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGTPDY 184
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMR 431
IAPE K++ D +SFGVLL +++G+ P F +E+ L +R
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP----FHGQDEEELFHSIR 231
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 36/226 (15%)
Query: 210 KIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRA----EIMTAGQIRHR 265
KI ++G + IA + S+GK++A+KK ++++ +Q R E++ +H
Sbjct: 38 KIGEGSTGIVCIATV-RSSGKLVAVKK--------MDLRKQQRRELLFNEVVIMRDYQHE 88
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N+V + + D +V EF++ G+L +I+ + +IA ++ L+ L
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--------MNEEQIAAVCLAVLQAL 140
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI-----VAGTVGY 380
+ H +IHR+I S+L+ D +++DFG AQVS + + GT +
Sbjct: 141 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC-------AQVSKEVPRRKXLVGTPYW 193
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
+APE L + + DI+S G+++ +V G+ P +F K++
Sbjct: 194 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAM 236
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 36/226 (15%)
Query: 210 KIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRA----EIMTAGQIRHR 265
KI ++G + IA + S+GK++A+KK ++++ +Q R E++ +H
Sbjct: 158 KIGEGSTGIVCIATV-RSSGKLVAVKK--------MDLRKQQRRELLFNEVVIMRDYQHE 208
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N+V + + D +V EF++ G+L +I+ + +IA ++ L+ L
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--------MNEEQIAAVCLAVLQAL 260
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI-----VAGTVGY 380
+ H +IHR+I S+L+ D +++DFG AQVS + + GT +
Sbjct: 261 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC-------AQVSKEVPRRKXLVGTPYW 313
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
+APE L + + DI+S G+++ +V G+ P +F K++
Sbjct: 314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAM 356
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 113/226 (50%), Gaps = 36/226 (15%)
Query: 210 KIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRA----EIMTAGQIRHR 265
KI ++G + IA + S+GK++A+KK ++++ +Q R E++ +H
Sbjct: 27 KIGEGSTGIVCIATV-RSSGKLVAVKK--------MDLRKQQRRELLFNEVVIMRDYQHE 77
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N+V + + D +V EF++ G+L +I V+ R E +IA ++ L+ L
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEE-----QIAAVCLAVLQAL 129
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI-----VAGTVGY 380
+ H +IHR+I S+L+ D +++DFG AQVS + + GT +
Sbjct: 130 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC-------AQVSKEVPRRKXLVGTPYW 182
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
+APE L + + DI+S G+++ +V G+ P +F K++
Sbjct: 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAM 225
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 209 EKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
E I + GE+ L ++ GK + +K + + R+ +E GQ H NI+
Sbjct: 22 EVIGAGEFGEVCRGRL-KAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L + ++++EFM+NG+L L ++ G+ + L + RGI SG+ YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLV--GMLRGIASGMRYLAEM 137
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS-TSIVAGTVG--YIAPEY 385
+HR++ ++L++ ++ +++DFGL+R + + + + TS + G + + APE
Sbjct: 138 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 386 HQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ D +S+G+++ V+ G+ P D
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 226
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 126/271 (46%), Gaps = 32/271 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVR 276
GE+++A + +A+K +K ++++ A +M ++H +V L A + +
Sbjct: 202 GEVWMATY--NKHTKVAVKTMKP---GSMSVEAFLAEANVMKT--LQHDKLVKLHAVVTK 254
Query: 277 PDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
++ ++EFM GSLL+ L ++ L L + I G+ ++ + IHR
Sbjct: 255 EPIYI-ITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQRN---YIHR 308
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
++ +++L+ + +IADFGLAR++ D + + APE F+ K D
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREG-AKFPIKWTAPEAINFGSFTIKSD 367
Query: 397 IYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQ 455
++SFG+LL ++ G++P + ++R + P N EE
Sbjct: 368 VWSFGILLMEIVTYGRIP----YPGMSNPEVIRALERGYRMPRPE---------NCPEEL 414
Query: 456 MLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
++++ C + PEERP + ++S+L D
Sbjct: 415 YNIMMR----CWKNRPEERPTFEYIQSVLDD 441
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 23 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 77
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 130
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + GT+ Y+ PE + E
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT----LCGTLDYLPPEMIEGRMHDE 186
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 9/202 (4%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVR 276
GE+ L + I + +K + + + R +E GQ H NI+ L + +
Sbjct: 43 GEVCSGRLKVPGKREICVA-IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 101
Query: 277 PDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
++++E+M+NGSL L + GR + L + RGI SG++YL +HR
Sbjct: 102 CKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVG--MLRGIGSGMKYLSDMS---AVHR 155
Query: 337 NITPSSVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
++ ++L++ ++ +++DFG++R++ D A +T + + APE KF+
Sbjct: 156 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS 215
Query: 396 DIYSFGVLL-AVLVMGKLPSDD 416
D++S+G+++ V+ G+ P D
Sbjct: 216 DVWSYGIVMWEVMSYGERPYWD 237
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 32/271 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVR 276
GE+++A + +A+K +K S+ AE ++H +V L A + +
Sbjct: 29 GEVWMATY--NKHTKVAVKTMKPGSMSV-----EAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 277 PDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
++ ++EFM GSLL+ L ++ L L + I G+ ++ + IHR
Sbjct: 82 EPIYI-ITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQRN---YIHR 135
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
++ +++L+ + +IADFGLAR++ D + + APE F+ K D
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREG-AKFPIKWTAPEAINFGSFTIKSD 194
Query: 397 IYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQ 455
++SFG+LL ++ G++P + ++R + P N EE
Sbjct: 195 VWSFGILLMEIVTYGRIP----YPGMSNPEVIRALERGYRMPRPE---------NCPEEL 241
Query: 456 MLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
++++ C + PEERP + ++S+L D
Sbjct: 242 YNIMMR----CWKNRPEERPTFEYIQSVLDD 268
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
EKI ASG +Y A + + G+ +AI+++ N K + EI+ + ++ NI
Sbjct: 25 FEKIGQGASGTVYTA-MDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNI 79
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V L + D +V E++ GSL +++ + ++ + R + LE+LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLH- 133
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGL-ARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
++IHR+I ++L+ D ++ DFG A++ P+ Q S + GT ++APE
Sbjct: 134 --SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSEMVGTPYWMAPEVV 188
Query: 387 QTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ K DI+S G++ ++ G+ P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 36/226 (15%)
Query: 210 KIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRA----EIMTAGQIRHR 265
KI ++G + IA + S+GK++A+KK ++++ +Q R E++ +H
Sbjct: 36 KIGEGSTGIVCIATV-RSSGKLVAVKK--------MDLRKQQRRELLFNEVVIMRDYQHE 86
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N+V + + D +V EF++ G+L +I+ + +IA ++ L+ L
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--------MNEEQIAAVCLAVLQAL 138
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI-----VAGTVGY 380
+ H +IHR+I S+L+ D +++DFG AQVS + + GT +
Sbjct: 139 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC-------AQVSKEVPRRKXLVGTPYW 191
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
+APE L + + DI+S G+++ +V G+ P +F K++
Sbjct: 192 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAM 234
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + +P +V+++ + SL L+ + + E
Sbjct: 74 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFE 129
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
+ IAR G++YLH IIHR++ +++ + +D+ +I DFGLA +
Sbjct: 130 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 186
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
++G++ ++APE +S + D+Y+FG++L L+ G+LP
Sbjct: 187 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + +P +V+++ + SL L+ + + E
Sbjct: 75 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFE 130
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
+ IAR G++YLH IIHR++ +++ + +D+ +I DFGLA +
Sbjct: 131 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 187
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
++G++ ++APE +S + D+Y+FG++L L+ G+LP
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + +P +V+++ + SL L+ + + E
Sbjct: 52 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFE 107
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
+ IAR G++YLH IIHR++ +++ + +D+ +I DFGLA +
Sbjct: 108 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
++G++ ++APE +S + D+Y+FG++L L+ G+LP +
Sbjct: 165 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 113/226 (50%), Gaps = 36/226 (15%)
Query: 210 KIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRA----EIMTAGQIRHR 265
KI ++G + IA + S+GK++A+KK ++++ +Q R E++ +H
Sbjct: 31 KIGEGSTGIVCIATV-RSSGKLVAVKK--------MDLRKQQRRELLFNEVVIMRDYQHE 81
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N+V + + D +V EF++ G+L +I V+ R E +IA ++ L+ L
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEE-----QIAAVCLAVLQAL 133
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI-----VAGTVGY 380
+ H +IHR+I S+L+ D +++DFG AQVS + + GT +
Sbjct: 134 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC-------AQVSKEVPRRKXLVGTPYW 186
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
+APE L + + DI+S G+++ +V G+ P +F K++
Sbjct: 187 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAM 229
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + +P +V+++ + SL L+ + + E
Sbjct: 47 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFE 102
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
+ IAR G++YLH IIHR++ +++ + +D+ +I DFGLA +
Sbjct: 103 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
++G++ ++APE +S + D+Y+FG++L L+ G+LP +
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 211
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVR 276
GE+ L + I + +K + + + R +E GQ H NI+ L + +
Sbjct: 28 GEVCSGRLKVPGKREICVA-IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 86
Query: 277 PDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
++++E+M+NGSL L + GR + L + RGI SG++YL +HR
Sbjct: 87 CKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVG--MLRGIGSGMKYLSDMS---YVHR 140
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
++ ++L++ ++ +++DFG++R++ D A +T + + APE KF+
Sbjct: 141 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS 200
Query: 396 DIYSFGVLL-AVLVMGKLPSDDF 417
D++S+G+++ V+ G+ P D
Sbjct: 201 DVWSYGIVMWEVMSYGERPYWDM 223
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + +P +V+++ + SL L+ + + E
Sbjct: 49 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFE 104
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
+ IAR G++YLH IIHR++ +++ + +D+ +I DFGLA +
Sbjct: 105 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 161
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
++G++ ++APE +S + D+Y+FG++L L+ G+LP +
Sbjct: 162 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 213
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 24 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 78
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 131
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + GT+ Y+ PE + E
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCGTLDYLPPEMIEGRMHDE 187
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 219
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 26 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 80
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 133
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 221
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 22 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 76
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 129
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPEMIEGRMHDE 185
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVR 276
GE+ L + I + +K + + + R +E GQ H NI+ L + +
Sbjct: 22 GEVCSGRLKVPGKREICVA-IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 80
Query: 277 PDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
++++E+M+NGSL L + GR + L + RGI SG++YL +HR
Sbjct: 81 CKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVG--MLRGIGSGMKYLSDMS---YVHR 134
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
++ ++L++ ++ +++DFG++R++ D A +T + + APE KF+
Sbjct: 135 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS 194
Query: 396 DIYSFGVLL-AVLVMGKLPSDDF 417
D++S+G+++ V+ G+ P D
Sbjct: 195 DVWSYGIVMWEVMSYGERPYWDM 217
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 22 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 76
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 129
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTXLCGTLDYLPPEMIEGRMHDE 185
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
LV E++ GSL + L S G +L A+ I G+ YLH H IHRN+
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQH---YIHRNLAAR 146
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT-VGYIAPEYHQTLKFSEKCDIYSF 400
+VL+D+D +I DFGLA+ +P+GH + V + APE + KF D++SF
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 206
Query: 401 GVLLAVLV 408
GV L L+
Sbjct: 207 GVTLYELL 214
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 23 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 77
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 130
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDE 186
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 36/226 (15%)
Query: 210 KIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRA----EIMTAGQIRHR 265
KI ++G + IA + S+GK++A+KK ++++ +Q R E++ +H
Sbjct: 81 KIGEGSTGIVCIATV-RSSGKLVAVKK--------MDLRKQQRRELLFNEVVIMRDYQHE 131
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N+V + + D +V EF++ G+L +I+ + +IA ++ L+ L
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--------MNEEQIAAVCLAVLQAL 183
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI-----VAGTVGY 380
+ H +IHR+I S+L+ D +++DFG AQVS + + GT +
Sbjct: 184 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC-------AQVSKEVPRRKXLVGTPYW 236
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
+APE L + + DI+S G+++ +V G+ P +F K++
Sbjct: 237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAM 279
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 22 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 76
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 129
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTELCGTLDYLPPEMIEGRMHDE 185
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 22 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 76
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 129
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 22 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 76
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 129
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 27 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 81
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 134
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDE 190
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
LV E++ GSL + L S G +L A+ I G+ YLH H IHRN+
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHSQH---YIHRNLAAR 146
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT-VGYIAPEYHQTLKFSEKCDIYSF 400
+VL+D+D +I DFGLA+ +P+GH + V + APE + KF D++SF
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 206
Query: 401 GVLLAVLV 408
GV L L+
Sbjct: 207 GVTLYELL 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRREL-EWLARHR 313
EI + H+++V D +V E + SLLE+ + R+ L E AR+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYY 122
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTS 372
+ R IV G +YLH R R+IHR++ ++ +++D+E +I DFGLA ++ DG + +
Sbjct: 123 L-RQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-- 176
Query: 373 IVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ GT YIAPE S + D++S G ++ L++GK P
Sbjct: 177 -LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV-RPDCHL-LV 283
+S+GK++ K++ S+ + + + +E+ +++H NIV ++ R + L +V
Sbjct: 28 KSDGKILVWKELDY--GSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85
Query: 284 SEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR-----PRIIHRNI 338
E+ + G L + +++G +E ++L + R + L HR ++HR++
Sbjct: 86 MEYCEGGDLASV---ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
P++V +D ++ DFGLAR++ H GT Y++PE + ++EK DI+
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIW 200
Query: 399 SFGVLLAVLVMGKLPSDDFFQ 419
S G LL L P F Q
Sbjct: 201 SLGCLLYELCALMPPFTAFSQ 221
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRREL-EWLARHR 313
EI + H+++V D +V E + SLLE+ + R+ L E AR+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYY 122
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTS 372
+ R IV G +YLH R R+IHR++ ++ +++D+E +I DFGLA ++ DG + +
Sbjct: 123 L-RQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-- 176
Query: 373 IVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ GT YIAPE S + D++S G ++ L++GK P
Sbjct: 177 -LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 25 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 79
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 132
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + GT+ Y+ PE + E
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIEGRMHDE 188
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 19 GNVYLAR--EKQRKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 73
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 74 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 126
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDE 182
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 214
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 14/162 (8%)
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRI 314
E+ ++ H NI+ L + +V E G E+ +++ + +R E A RI
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG---ELFDEIIKRKRFSEHDA-ARI 126
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDD---DMEARIADFGLARLMPDGHAQVST 371
+ + SG+ Y+H ++ I+HR++ P ++L++ D + +I DFGL+ + ++
Sbjct: 127 IKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKD 182
Query: 372 SIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
I GT YIAPE + + EKCD++S GV+L +L+ G P
Sbjct: 183 RI--GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 24 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 78
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 131
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IA+FG + P + + GT+ Y+ PE + E
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDE 187
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 219
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRREL-EWLARHR 313
EI + H+++V D +V E + SLLE+ + R+ L E AR+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYY 126
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTS 372
+ R IV G +YLH R R+IHR++ ++ +++D+E +I DFGLA ++ DG + +
Sbjct: 127 L-RQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-- 180
Query: 373 IVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ GT YIAPE S + D++S G ++ L++GK P
Sbjct: 181 -LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 38 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 94
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 95 VTEXMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---YVHRDLAARN 148
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + +PE KF+ D++S+G
Sbjct: 149 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 208
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 209 IVLWEVMSYGERP 221
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 27/231 (11%)
Query: 208 LEKIRSRAS-GEIYIAELPESNGKMIAIKKVKQVDNSLLN--IKMRQVRAEIMTAGQIRH 264
L K+ + S G++++AE ++N + AIK +K+ D L++ ++ V +++
Sbjct: 22 LHKMLGKGSFGKVFLAEFKKTN-QFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEH- 78
Query: 265 RNIVPLLAHMV----RPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVS 320
P L HM + V E++ G L+ + Q + + A I+
Sbjct: 79 ----PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEIIL 130
Query: 321 GLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
GL++LH I++R++ ++L+D D +IADFG+ + G A+ T+ GT Y
Sbjct: 131 GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGTPDY 185
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMR 431
IAPE K++ D +SFGVLL +++G+ P F +E+ L +R
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP----FHGQDEEELFHSIR 232
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 48 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 102
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 155
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + GT+ Y+ PE + E
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RDDLCGTLDYLPPEMIEGRMHDE 211
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHT 421
K D++S GVL ++GK P + + +Q T
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQET 240
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV-RPDCHL-LV 283
+S+GK++ K++ S+ + + + +E+ +++H NIV ++ R + L +V
Sbjct: 28 KSDGKILVWKELDY--GSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85
Query: 284 SEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR-----PRIIHRNI 338
E+ + G L + +++G +E ++L + R + L HR ++HR++
Sbjct: 86 MEYCEGGDLASV---ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
P++V +D ++ DFGLAR++ H GT Y++PE + ++EK DI+
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW 200
Query: 399 SFGVLLAVLVMGKLPSDDFFQ 419
S G LL L P F Q
Sbjct: 201 SLGCLLYELCALMPPFTAFSQ 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 113 YAKNGCLLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 165
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE S+ D+++ G ++
Sbjct: 166 NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIY 225
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 226 QLVAGLPP 233
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 22 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 76
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 129
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + GT+ Y+ PE + E
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIEGRMHDE 185
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 67 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 124 VTEXMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---AVHRDLAARN 177
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + +PE KF+ D++S+G
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 238 IVLWEVMSYGERP 250
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 20/198 (10%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
E K+I KK+ D L + R R +++H NIV L + H LV +
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICR-------KLQHPNIVRLHDSIQEESFHYLVFD 85
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G L E D+ E A H I + I+ + Y H I+HRN+ P ++L+
Sbjct: 86 LVTGGELFE---DIVAREFYSEADASHCIQQ-ILESIAYCH---SNGIVHRNLKPENLLL 138
Query: 346 DDDMEA---RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
+ ++ADFGLA + D A AGT GY++PE + +S+ DI++ GV
Sbjct: 139 ASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVLKKDPYSKPVDIWACGV 195
Query: 403 LLAVLVMGKLPSDDFFQH 420
+L +L++G P D QH
Sbjct: 196 ILYILLVGYPPFWDEDQH 213
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 28/249 (11%)
Query: 165 PTTPSLLLAAVRGGG-QNRGPTIFSPLIEKEDLAFLEK--EDCSASLEKIRSRASGEIYI 221
PTT +L G ++R PT F E+ L FL++ + S+E R
Sbjct: 15 PTTENLYFQGAMGSAFEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRYDP------ 64
Query: 222 AELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDC 279
L ++ G+++A+KK++ L R EI ++H NIV + +
Sbjct: 65 --LQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118
Query: 280 HLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNIT 339
L+ E++ GSL + L + + ++ + + I G+EYL R IHR++
Sbjct: 119 LKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLA 172
Query: 340 PSSVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
++L++++ +I DFGL +++P D + + APE KFS D++
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 232
Query: 399 SFGVLLAVL 407
SFGV+L L
Sbjct: 233 SFGVVLYEL 241
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 67 KLPSKKEISVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E M+NGSL L ++ + + RGI SG++YL +HR++ +
Sbjct: 124 VTEXMENGSLDSFLRKHDAQFTVIQLVG---MLRGIASGMKYLSDMG---YVHRDLAARN 177
Query: 343 VLIDDDMEARIADFGLARLMPDG-HAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + +PE KF+ D++S+G
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 402 VLL-AVLVMGKLP 413
++L V+ G+ P
Sbjct: 238 IVLWEVMSYGERP 250
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + +P +V+++ + SL L+ S+ + E++
Sbjct: 63 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-ASETKFEMK 120
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
L IAR G++YLH IIHR++ +++ + +D +I DFGLA
Sbjct: 121 KLID--IARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
++G++ ++APE + +S + D+Y+FG++L L+ G+LP
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV-RPDCHL-LV 283
+S+GK++ K++ S+ + + + +E+ +++H NIV ++ R + L +V
Sbjct: 28 KSDGKILVWKELDY--GSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85
Query: 284 SEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR-----PRIIHRNI 338
E+ + G L + +++G +E ++L + R + L HR ++HR++
Sbjct: 86 MEYCEGGDLASV---ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
P++V +D ++ DFGLAR++ H + GT Y++PE + ++EK DI+
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARIL--NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIW 200
Query: 399 SFGVLLAVLVMGKLPSDDFFQ 419
S G LL L P F Q
Sbjct: 201 SLGCLLYELCALMPPFTAFSQ 221
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 200 EKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTA 259
+ E+ LEKI + GE++ + K++AIK +D ++ ++ EI
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIK---IIDLEEAEDEIEDIQQEITVL 74
Query: 260 GQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
Q + ++ ++ E++ GS L++L ++ I R I+
Sbjct: 75 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREIL 129
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+YLH + IHR+I ++VL+ + E ++ADFG+A + D Q+ + GT
Sbjct: 130 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPF 184
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDF 417
++APE + + K DI+S G+ L G+ P +
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 25 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 79
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 132
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IA+FG + P + + GT+ Y+ PE + E
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 20/198 (10%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
E K+I KK+ D L + R R +++H NIV L + H LV +
Sbjct: 56 EFAAKIINTKKLSARDFQKLEREARICR-------KLQHPNIVRLHDSIQEESFHYLVFD 108
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G L E D+ E A H I + I+ + Y H I+HRN+ P ++L+
Sbjct: 109 LVTGGELFE---DIVAREFYSEADASHCIQQ-ILESIAYCH---SNGIVHRNLKPENLLL 161
Query: 346 DDDMEA---RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
+ ++ADFGLA + D A AGT GY++PE + +S+ DI++ GV
Sbjct: 162 ASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVLKKDPYSKPVDIWACGV 218
Query: 403 LLAVLVMGKLPSDDFFQH 420
+L +L++G P D QH
Sbjct: 219 ILYILLVGYPPFWDEDQH 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + +P +V+++ + SL L+ + + E
Sbjct: 67 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFE 122
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
+ IAR G++YLH IIHR++ +++ + +D+ +I DFGLA
Sbjct: 123 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 179
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
++G++ ++APE +S + D+Y+FG++L L+ G+LP
Sbjct: 180 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 20/198 (10%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
E K+I KK+ D L + R R +++H NIV L + H LV +
Sbjct: 32 EFAAKIINTKKLSARDFQKLEREARICR-------KLQHPNIVRLHDSIQEESFHYLVFD 84
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G L E D+ E A H I + I+ + Y H I+HRN+ P ++L+
Sbjct: 85 LVTGGELFE---DIVAREFYSEADASHCIQQ-ILESIAYCH---SNGIVHRNLKPENLLL 137
Query: 346 DDDMEA---RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
+ ++ADFGLA + D A AGT GY++PE + +S+ DI++ GV
Sbjct: 138 ASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVLKKDPYSKPVDIWACGV 194
Query: 403 LLAVLVMGKLPSDDFFQH 420
+L +L++G P D QH
Sbjct: 195 ILYILLVGYPPFWDEDQH 212
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 88/172 (51%), Gaps = 10/172 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + +P +V+++ + SL L+ + + E
Sbjct: 47 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFE 102
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
+ IAR G++YLH IIHR++ +++ + +D+ +I DFGLA
Sbjct: 103 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 159
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
++G++ ++APE +S + D+Y+FG++L L+ G+LP +
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 211
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 20/198 (10%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
E K+I KK+ D L + R R +++H NIV L + H LV +
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICR-------KLQHPNIVRLHDSIQEESFHYLVFD 85
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G L E D+ E A H I + I+ + Y H I+HRN+ P ++L+
Sbjct: 86 LVTGGELFE---DIVAREFYSEADASHCIQQ-ILESIAYCH---SNGIVHRNLKPENLLL 138
Query: 346 DDDMEA---RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
+ ++ADFGLA + D A AGT GY++PE + +S+ DI++ GV
Sbjct: 139 ASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVLKKDPYSKPVDIWACGV 195
Query: 403 LLAVLVMGKLPSDDFFQH 420
+L +L++G P D QH
Sbjct: 196 ILYILLVGYPPFWDEDQH 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 88/172 (51%), Gaps = 10/172 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + P +V+++ + SL L+ + + E
Sbjct: 47 QLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIET---KFE 102
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
+ IAR G++YLH IIHR++ +++ + +D+ +I DFGLA +
Sbjct: 103 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
++G++ ++APE +S + D+Y+FG++L L+ G+LP +
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + +P +V+++ + SL L+ + + E
Sbjct: 75 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFE 130
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
+ IAR G++YLH IIHR++ +++ + +D+ +I DFGLA
Sbjct: 131 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 187
Query: 368 QVSTSIVAGTVGYIAPE---YHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
++G++ ++APE +S + D+Y+FG++L L+ G+LP
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
+ G+++AIKK++ D L +R +R EI +H NI+ + ++ RPD
Sbjct: 33 KPTGEIVAIKKIEPFDKPLF--ALRTLR-EIKILKHFKHENIITIF-NIQRPDS---FEN 85
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
F + + E++ + L+ I I L + + H +IHR++ PS++LI
Sbjct: 86 FNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI 145
Query: 346 DDDMEARIADFGLARLM---------PDGHAQVSTSIVAGTVGYIAPEYHQT-LKFSEKC 395
+ + + ++ DFGLAR++ P G T VA T Y APE T K+S
Sbjct: 146 NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA-TRWYRAPEVMLTSAKYSRAM 204
Query: 396 DIYSFGVLLAVLVMGK--LPSDDF 417
D++S G +LA L + + P D+
Sbjct: 205 DVWSCGCILAELFLRRPIFPGRDY 228
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 10/107 (9%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT 377
I GLE LH R RI++R++ P ++L+DD RI+D GLA +P+G + GT
Sbjct: 295 ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGT 348
Query: 378 VGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
VGY+APE + +++ D ++ G LL ++ G+ P FQ ++K
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP----FQQRKKK 391
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 10/107 (9%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT 377
I GLE LH R RI++R++ P ++L+DD RI+D GLA +P+G + GT
Sbjct: 295 ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGT 348
Query: 378 VGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
VGY+APE + +++ D ++ G LL ++ G+ P FQ ++K
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP----FQQRKKK 391
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 90 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 142
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 143 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 202
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 203 QLVAGLPP 210
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
+ G+++AIKK++ D L +R +R EI +H NI+ + ++ RPD
Sbjct: 33 KPTGEIVAIKKIEPFDKPLF--ALRTLR-EIKILKHFKHENIITIF-NIQRPDS---FEN 85
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
F + + E++ + L+ I I L + + H +IHR++ PS++LI
Sbjct: 86 FNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI 145
Query: 346 DDDMEARIADFGLARLM---------PDGHAQVSTSIVAGTVGYIAPEYHQT-LKFSEKC 395
+ + + ++ DFGLAR++ P G T VA T Y APE T K+S
Sbjct: 146 NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA-TRWYRAPEVMLTSAKYSRAM 204
Query: 396 DIYSFGVLLAVLVMGK--LPSDDF 417
D++S G +LA L + + P D+
Sbjct: 205 DVWSCGCILAELFLRRPIFPGRDY 228
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 88 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 140
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 141 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 200
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 201 QLVAGLPP 208
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLL---NIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G++ +A + E+ G + A+K +K+ + +L +++ I++ + H + L
Sbjct: 37 GKVMLARVKET-GDLYAVKVLKK--DVILQDDDVECTMTEKRILSLAR-NHPFLTQLFCC 92
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
PD V EF+ G L+ + + RR E AR A I+S L +LH I
Sbjct: 93 FQTPDRLFFVMEFVNGGDLM---FHIQKSRRFDEARARFYAAE-IISALMFLH---DKGI 145
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQ-VSTSIVAGTVGYIAPEYHQTLKFS 392
I+R++ +VL+D + ++ADFG+ + +G V+T+ GT YIAPE Q + +
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAPEILQEMLYG 202
Query: 393 EKCDIYSFGVLLAVLVMGKLP-----SDDFFQ 419
D ++ GVLL ++ G P DD F+
Sbjct: 203 PAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 89 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 141
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 142 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 201
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 202 QLVAGLPP 209
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 91 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 143
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 144 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 203
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 204 QLVAGLPP 211
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 14/138 (10%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
LV ++ G LL +L+ R E +AR +A +++ ++ +H H +HR+I P
Sbjct: 151 LVMDYYVGGDLLTLLSKFED--RLPEEMARFYLAEMVIA-IDSVHQLH---YVHRDIKPD 204
Query: 342 SVLIDDDMEARIADFG-LARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL-----KFSEKC 395
++L+D + R+ADFG +LM DG Q +S+ GT YI+PE Q + ++ +C
Sbjct: 205 NILMDMNGHIRLADFGSCLKLMEDGTVQ--SSVAVGTPDYISPEILQAMEGGKGRYGPEC 262
Query: 396 DIYSFGVLLAVLVMGKLP 413
D +S GV + ++ G+ P
Sbjct: 263 DWWSLGVCMYEMLYGETP 280
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + + Q+R E+ +RH NI+ L +
Sbjct: 25 GNVYLAR--EKQSKFILALKVLFKAQLEKAGVE---HQLRREVEIQSHLRHPNILRLYGY 79
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ E+ G++ L +S+ R A I L H R+
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHSKRV 132
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + GT+ Y+ PE + E
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDDLCGTLDYLPPEMIEGRMHDE 188
Query: 394 KCDIYSFGVLLAVLVMGKLPSD-DFFQHTEEK 424
K D++S GVL ++GK P + + +Q T ++
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 95 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 147
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 148 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 207
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 208 QLVAGLPP 215
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 111 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 163
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 164 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 224 QLVAGLPP 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 111 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 163
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 164 NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 224 QLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 113 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 165
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 166 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 226 QLVAGLPP 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 118 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 170
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 171 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 230
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 231 QLVAGLPP 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 111 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 163
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 164 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 224 QLVAGLPP 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 110 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 162
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 163 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 222
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 223 QLVAGLPP 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 111 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 163
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 164 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 224 QLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 113 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 165
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 166 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 226 QLVAGLPP 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 113 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 165
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 166 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 226 QLVAGLPP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 113 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 165
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 166 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 226 QLVAGLPP 233
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 21/237 (8%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVK--QVDNSLLNIKMRQVRAEIMTAGQIRH 264
LEKI G +Y A+ + G+ A+KK++ + D + + +R EI +++H
Sbjct: 6 GLEKIGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTTIR----EISILKELKH 59
Query: 265 RNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEY 324
NIV L + +LV E + L+ L DV +G LE + +++G+ Y
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGG--LESVTAKSFLLQLLNGIAY 115
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H R++HR++ P ++LI+ + E +IADFGLAR + + IV T+ Y AP+
Sbjct: 116 CH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRAPD 170
Query: 385 -YHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPN 440
+ K+S DI+S G + A +V G + F +E L+R R + T + N
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNG---TPLFPGVSEADQLMRIFRILGTPNSKN 224
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 14/162 (8%)
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRI 314
E+ ++ H NI+ L + +V E G E+ +++ + +R E A RI
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG---ELFDEIIKRKRFSEHDAA-RI 126
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDD---DMEARIADFGLARLMPDGHAQVST 371
+ + SG+ Y+H ++ I+HR++ P ++L++ D + +I DFGL+ + ++
Sbjct: 127 IKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKD 182
Query: 372 SIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
I GT YIAPE + + EKCD++S GV+L +L+ G P
Sbjct: 183 RI--GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 114 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 166
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 167 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 226
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 227 QLVAGLPP 234
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 14/162 (8%)
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRI 314
E+ ++ H NI+ L + +V E G E+ +++ + +R E A RI
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG---ELFDEIIKRKRFSEHDAA-RI 126
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDD---DMEARIADFGLARLMPDGHAQVST 371
+ + SG+ Y+H ++ I+HR++ P ++L++ D + +I DFGL+ + ++
Sbjct: 127 IKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKD 182
Query: 372 SIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
I GT YIAPE + + EKCD++S GV+L +L+ G P
Sbjct: 183 RI--GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
LV E++ GSL + L S G +L A+ I G+ YLH H IHR++
Sbjct: 112 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQH---YIHRDLAAR 163
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT-VGYIAPEYHQTLKFSEKCDIYSF 400
+VL+D+D +I DFGLA+ +P+GH + V + APE + KF D++SF
Sbjct: 164 NVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 223
Query: 401 GVLLAVLV 408
GV L L+
Sbjct: 224 GVTLYELL 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 113 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 165
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 166 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIY 225
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 226 QLVAGLPP 233
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 26/207 (12%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
+ G+++AIKK++ D L +R +R EI +H NI+ + ++ RPD
Sbjct: 33 KPTGEIVAIKKIEPFDKPLF--ALRTLR-EIKILKHFKHENIITIF-NIQRPDS------ 82
Query: 286 FMKNGSLLEILNDVSQGRRE----LEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+N + + I+ ++ Q + L+ I I L + + H +IHR++ PS
Sbjct: 83 -FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPS 141
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVS--TSIVAGTVGYIAPEYHQ-------TLKFS 392
++LI+ + + ++ DFGLAR++ + A S T +G V ++A +++ + K+S
Sbjct: 142 NLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYS 201
Query: 393 EKCDIYSFGVLLAVLVMGK--LPSDDF 417
D++S G +LA L + + P D+
Sbjct: 202 RAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 116 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 168
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 169 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 228
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 229 QLVAGLPP 236
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 110 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 162
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 163 NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 222
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 223 QLVAGLPP 230
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 200 EKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTA 259
+ E+ LE+I + GE++ + +++AIK +D ++ ++ EI
Sbjct: 20 DPEELFTKLERIGKGSFGEVFKG-IDNRTQQVVAIK---IIDLEEAEDEIEDIQQEITVL 75
Query: 260 GQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
Q + ++ ++ E++ GS L++L ++ + + I+
Sbjct: 76 SQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE-----IL 130
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+YLH + IHR+I ++VL+ + + ++ADFG+A + D Q+ + GT
Sbjct: 131 KGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPF 185
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
++APE Q + K DI+S G+ L G+ P+ D
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSD 222
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 22/229 (9%)
Query: 215 ASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
A E+ +AE + K++AIK + + L K + EI +I+H NIV L +
Sbjct: 30 AFSEVILAE-DKRTQKLVAIKCIAK---EALEGKEGSMENEIAVLHKIKHPNIVAL-DDI 84
Query: 275 VRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
HL L+ + + G L + + V +G + +R I L+ + H I
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI--VEKG-----FYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 334 IHRNITPSSVL---IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK 390
+HR++ P ++L +D+D + I+DFGL++ M D + +ST+ GT GY+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTA--CGTPGYVAPEVLAQKP 194
Query: 391 FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENP 439
+S+ D +S GV+ +L+ G P F+ + K + ++ ++P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP---FYDENDAKLFEQILKAEYEFDSP 240
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 89/169 (52%), Gaps = 10/169 (5%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+ + RH NI+ + + P +V+++ + SL L+ S+ + E++
Sbjct: 63 QLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLH-ASETKFEMK 120
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
L IAR G++YLH IIHR++ +++ + +D +I DFGLA
Sbjct: 121 KLID--IARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 368 QVSTSIVAGTVGYIAPEY---HQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
++G++ ++APE + +S + D+Y+FG++L L+ G+LP
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ KNG LL+ + + E R A IVS LEYLH IIHR++ P ++L+
Sbjct: 114 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIHRDLKPENILL 166
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
++DM +I DFG A+++ Q + GT Y++PE + D+++ G ++
Sbjct: 167 NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 226
Query: 406 VLVMGKLP 413
LV G P
Sbjct: 227 QLVAGLPP 234
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 18/195 (9%)
Query: 226 ESNGKMIAIKKVKQVDNSLL--NIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLV 283
+ G+++AIKK + D+ + I MR EI Q+RH N+V LL + LV
Sbjct: 47 KDTGRIVAIKKFLESDDDKMVKKIAMR----EIKLLKQLRHENLVNLLEVCKKKKRWYLV 102
Query: 284 SEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSV 343
EF+ + IL+D+ L++ + I++G+ + H ++ IIHR+I P ++
Sbjct: 103 FEFVDH----TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENI 155
Query: 344 LIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH-QTLKFSEKCDIYSFGV 402
L+ ++ DFG AR + +V VA T Y APE +K+ + D+++ G
Sbjct: 156 LVSQSGVVKLCDFGFARTLA-APGEVYDDEVA-TRWYRAPELLVGDVKYGKAVDVWAIGC 213
Query: 403 LLAVLVMGK--LPSD 415
L+ + MG+ P D
Sbjct: 214 LVTEMFMGEPLFPGD 228
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 22/229 (9%)
Query: 215 ASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
A E+ +AE + K++AIK + + L K + EI +I+H NIV L +
Sbjct: 30 AFSEVILAEDKRTQ-KLVAIKCIAK---EALEGKEGSMENEIAVLHKIKHPNIVAL-DDI 84
Query: 275 VRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
HL L+ + + G L + + V +G + +R I L+ + H I
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI--VEKG-----FYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 334 IHRNITPSSVL---IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK 390
+HR++ P ++L +D+D + I+DFGL++ M D + +ST+ GT GY+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTA--CGTPGYVAPEVLAQKP 194
Query: 391 FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENP 439
+S+ D +S GV+ +L+ G P F+ + K + ++ ++P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP---FYDENDAKLFEQILKAEYEFDSP 240
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 22/229 (9%)
Query: 215 ASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
A E+ +AE + K++AIK + + L K + EI +I+H NIV L +
Sbjct: 30 AFSEVILAEDKRTQ-KLVAIKCIAK---EALEGKEGSMENEIAVLHKIKHPNIVAL-DDI 84
Query: 275 VRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
HL L+ + + G L + + V +G + +R I L+ + H I
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI--VEKG-----FYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 334 IHRNITPSSVL---IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK 390
+HR++ P ++L +D+D + I+DFGL++ M D + +ST+ GT GY+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTA--CGTPGYVAPEVLAQKP 194
Query: 391 FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENP 439
+S+ D +S GV+ +L+ G P F+ + K + ++ ++P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP---FYDENDAKLFEQILKAEYEFDSP 240
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 11/193 (5%)
Query: 223 ELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLL 282
+LP +AIK +K + R E GQ H NI+ L + + ++
Sbjct: 44 KLPGKRELPVAIKTLKV---GYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMI 100
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V+E+M+NGSL L + G+ + L + RGI +G++YL +HR++ +
Sbjct: 101 VTEYMENGSLDTFLKK-NDGQFTVIQLVG--MLRGISAGMKYLSDMG---YVHRDLAARN 154
Query: 343 VLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+LI+ ++ +++DFGL+R++ D A +T + + APE KF+ D++S+G
Sbjct: 155 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYG 214
Query: 402 VLL-AVLVMGKLP 413
+++ V+ G+ P
Sbjct: 215 IVMWEVVSYGERP 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
K ++ + E+ + H NIV L M P +V EF+ G L L D + ++
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAH---PIK 120
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDME-----ARIADFGLARLM 362
W + R+ I G+EY+ P I+HR++ ++ + E A++ADFGL++
Sbjct: 121 WSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-- 177
Query: 363 PDGHAQVSTSIVAGTVGYIAPEY--HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDF 417
+ S S + G ++APE + ++EK D YSF ++L ++ G+ P D++
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 134/317 (42%), Gaps = 46/317 (14%)
Query: 189 PLIEKEDLAFLEKEDCSAS--LEKIRSRASGEIYIAEL----PESNGKMIAIKKVKQVDN 242
PLI + A L++ SA +E++ G++Y L P + +AIK +K
Sbjct: 10 PLINQHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE 69
Query: 243 SLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL------ 296
L + R E M +++H N+V LL + + ++ + +G L E L
Sbjct: 70 GPLR---EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPH 126
Query: 297 ------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDME 350
+D + LE + I +G+EYL +H ++H+++ +VL+ D +
Sbjct: 127 SDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183
Query: 351 ARIADFGLAR--LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVL 407
+I+D GL R D + + S++ + ++APE KFS DI+S+GV+L V
Sbjct: 184 VKISDLGLFREVYAADYYKLLGNSLL--PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
Query: 408 VMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCT 467
G P + + +V +RN P+ + L I C+
Sbjct: 242 SYGLQPYCGY----SNQDVVEMIRNRQVLPCPDDC-----------PAWVYALMIECWNE 286
Query: 468 LDDPEERPNSKDVRSML 484
P RP KD+ S L
Sbjct: 287 F--PSRRPRFKDIHSRL 301
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 21/237 (8%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVK--QVDNSLLNIKMRQVRAEIMTAGQIRH 264
LEKI G +Y A+ + G+ A+KK++ + D + + +R EI +++H
Sbjct: 6 GLEKIGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTTIR----EISILKELKH 59
Query: 265 RNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEY 324
NIV L + +LV E + L+ L DV +G LE + +++G+ Y
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGG--LESVTAKSFLLQLLNGIAY 115
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H R++HR++ P ++LI+ + E +IADFGLAR + + +V T+ Y AP+
Sbjct: 116 CH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPD 170
Query: 385 -YHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPN 440
+ K+S DI+S G + A +V G + F +E L+R R + T + N
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNG---APLFPGVSEADQLMRIFRILGTPNSKN 224
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 21/237 (8%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVK--QVDNSLLNIKMRQVRAEIMTAGQIRH 264
LEKI G +Y A+ + G+ A+KK++ + D + + +R EI +++H
Sbjct: 6 GLEKIGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTTIR----EISILKELKH 59
Query: 265 RNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEY 324
NIV L + +LV E + L+ L DV +G LE + +++G+ Y
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGG--LESVTAKSFLLQLLNGIAY 115
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H R++HR++ P ++LI+ + E +IADFGLAR + + +V T+ Y AP+
Sbjct: 116 CH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPD 170
Query: 385 -YHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPN 440
+ K+S DI+S G + A +V G + F +E L+R R + T + N
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNG---TPLFPGVSEADQLMRIFRILGTPNSKN 224
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 262 IRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSG 321
+ H +V L + +++E+M NG LL L ++ R + + + +
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEA 132
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
+EYL + +HR++ + L++D +++DFGL+R + D + S+ V +
Sbjct: 133 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-ETSSVGSKFPVRWS 188
Query: 382 APEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDF 417
PE KFS K DI++FGVL+ + +GK+P + F
Sbjct: 189 PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 105/216 (48%), Gaps = 25/216 (11%)
Query: 205 SASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRH 264
S+ + + RA+G + ++ E + ++ +++++V + R+ AG H
Sbjct: 107 SSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA----TRRETHILRQVAG---H 159
Query: 265 RNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILND-VSQGRRELEWLARHRIARGIVSGLE 323
+I+ L+ LV + M+ G L + L + V+ +E I R ++ +
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR-----SIMRSLLEAVS 214
Query: 324 YLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAP 383
+LH + I+HR++ P ++L+DD+M+ R++DFG + + G + GT GY+AP
Sbjct: 215 FLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYLAP 268
Query: 384 EYHQT------LKFSEKCDIYSFGVLLAVLVMGKLP 413
E + + ++ D+++ GV+L L+ G P
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 22/229 (9%)
Query: 215 ASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
A E+ +AE + K++AIK + + L K + EI +I+H NIV L +
Sbjct: 30 AFSEVILAEDKRTQ-KLVAIKCIAK---KALEGKEGSMENEIAVLHKIKHPNIVAL-DDI 84
Query: 275 VRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
HL L+ + + G L + + V +G + +R I L+ + H I
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI--VEKG-----FYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 334 IHRNITPSSVL---IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK 390
+HR++ P ++L +D+D + I+DFGL++ M D + +ST+ GT GY+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTA--CGTPGYVAPEVLAQKP 194
Query: 391 FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENP 439
+S+ D +S GV+ +L+ G P F+ + K + ++ ++P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP---FYDENDAKLFEQILKAEYEFDSP 240
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 61/281 (21%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLA------HMVRP---- 277
+ + AIKK++ + K+ + +E+M + H+ +V A + V+P
Sbjct: 30 DSRYYAIKKIRHTEE-----KLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84
Query: 278 ---DCHLLVSEFMKNGSLLEILN--DVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPR 332
+ E+ +NG+L ++++ +++Q R E W R+ R I+ L Y+H
Sbjct: 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY-W----RLFRQILEALSYIH---SQG 136
Query: 333 IIHRNITPSSVLIDDDMEARIADFGLAR--------------LMPDGHAQVSTSIVAGTV 378
IIHR++ P ++ ID+ +I DFGLA+ +P ++++I GT
Sbjct: 137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI--GTA 194
Query: 379 GYIAPE-YHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSE 437
Y+A E T ++EK D+YS G++ ++ F E ++++ +R+V + E
Sbjct: 195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY------PFSTGMERVNILKKLRSV-SIE 247
Query: 438 NPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSK 478
P D+K M + KI DP +RP ++
Sbjct: 248 FPPDFDDNK---------MKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
E M GSL ++L GR + L + IA ++ GL YL H+ I+HR++ PS++L
Sbjct: 146 EHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNIL 199
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
++ E ++ DFG++ + D A S V GT Y++PE Q +S + DI+S G+ L
Sbjct: 200 VNSRGEIKLCDFGVSGQLIDSMA---NSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSL 255
Query: 405 AVLVMGKLP 413
+ +G+ P
Sbjct: 256 VEMAVGRYP 264
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 262 IRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSG 321
+ H +V L + +++E+M NG LL L ++ R + + + +
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEA 117
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT--VG 379
+EYL + +HR++ + L++D +++DFGL+R + D TS V V
Sbjct: 118 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVR 171
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDF 417
+ PE KFS K DI++FGVL+ + +GK+P + F
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 210
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 262 IRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSG 321
+ H +V L + +++E+M NG LL L ++ R + + + +
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEA 116
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT--VG 379
+EYL + +HR++ + L++D +++DFGL+R + D TS V V
Sbjct: 117 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVR 170
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDF 417
+ PE KFS K DI++FGVL+ + +GK+P + F
Sbjct: 171 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 208 LEKIRSRASGEIYIAEL------PESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQ 261
L+KIR G L + G+M+A+K +K+ L ++ EI
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR---EIEILRT 66
Query: 262 IRHRNIVPLLAHMVRPDCH-------LLVSEFMKNGSLLEILNDVSQGRRELEWLARHRI 314
+ H +IV + C LV E++ GSL + L G +L A+
Sbjct: 67 LYHEHIV-----KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-- 119
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
I G+ YLH H IHR + +VL+D+D +I DFGLA+ +P+GH
Sbjct: 120 ---ICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 173
Query: 375 AGT-VGYIAPEYHQTLKFSEKCDIYSFGVLLAVLV 408
+ V + APE + KF D++SFGV L L+
Sbjct: 174 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 262 IRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSG 321
+ H +V L + +++E+M NG LL L ++ R + + + +
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEA 112
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT--VG 379
+EYL + +HR++ + L++D +++DFGL+R + D TS V V
Sbjct: 113 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVR 166
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDF 417
+ PE KFS K DI++FGVL+ + +GK+P + F
Sbjct: 167 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 205
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 262 IRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSG 321
+ H +V L + +++E+M NG LL L ++ R + + + +
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEA 123
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT--VG 379
+EYL + +HR++ + L++D +++DFGL+R + D TS V V
Sbjct: 124 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVR 177
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDF 417
+ PE KFS K DI++FGVL+ + +GK+P + F
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 216
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 208 LEKIRSRASGEIYIAEL------PESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQ 261
L+KIR G L + G+M+A+K +K+ L ++ EI
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR---EIEILRT 67
Query: 262 IRHRNIVPLLAHMVRPDCH-------LLVSEFMKNGSLLEILNDVSQGRRELEWLARHRI 314
+ H +IV + C LV E++ GSL + L G +L A+
Sbjct: 68 LYHEHIV-----KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-- 120
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
I G+ YLH H IHR + +VL+D+D +I DFGLA+ +P+GH
Sbjct: 121 ---ICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 174
Query: 375 AGT-VGYIAPEYHQTLKFSEKCDIYSFGVLLAVLV 408
+ V + APE + KF D++SFGV L L+
Sbjct: 175 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 33/217 (15%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRA----EIMTAGQ 261
A+ KI ++G + IA + GK +A+KK ++++ +Q R E++
Sbjct: 48 ANFIKIGEGSTGIVCIAT-EKHTGKQVAVKK--------MDLRKQQRRELLFNEVVIMRD 98
Query: 262 IRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSG 321
H N+V + + + D +V EF++ G+L +I V+ R E +A + ++
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAT--VCLSVLRA 153
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI-----VAG 376
L YLH +IHR+I S+L+ D +++DFG AQVS + + G
Sbjct: 154 LSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFC-------AQVSKEVPKRKXLVG 203
Query: 377 TVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
T ++APE L + + DI+S G+++ ++ G+ P
Sbjct: 204 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT 377
IVSGLE+LH + II+R++ P +VL+DDD RI+D GLA + G Q T AGT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352
Query: 378 VGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
G++APE ++ D ++ GV L ++ + P + E K L
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
E M GSL ++L GR + L + IA ++ GL YL H+ I+HR++ PS++L
Sbjct: 111 EHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNIL 164
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
++ E ++ DFG++ + D A S V GT Y++PE Q +S + DI+S G+ L
Sbjct: 165 VNSRGEIKLCDFGVSGQLIDSMA---NSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSL 220
Query: 405 AVLVMGKLP 413
+ +G+ P
Sbjct: 221 VEMAVGRYP 229
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 262 IRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSG 321
+ H +V L + +++E+M NG LL L ++ R + + + +
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEA 117
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
+EYL + +HR++ + L++D +++DFGL+R + D S+ V +
Sbjct: 118 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSRGSKFPVRWS 173
Query: 382 APEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDF 417
PE KFS K DI++FGVL+ + +GK+P + F
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 210
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 262 IRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSG 321
+ H +V L + +++E+M NG LL L ++ R + + + +
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEA 132
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAG--TVG 379
+EYL + +HR++ + L++D +++DFGL+R + D TS V V
Sbjct: 133 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVR 186
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDF 417
+ PE KFS K DI++FGVL+ + +GK+P + F
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT 377
IVSGLE+LH + II+R++ P +VL+DDD RI+D GLA + G Q T AGT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352
Query: 378 VGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
G++APE ++ D ++ GV L ++ + P + E K L
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT 377
IVSGLE+LH + II+R++ P +VL+DDD RI+D GLA + G Q T AGT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352
Query: 378 VGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
G++APE ++ D ++ GV L ++ + P + E K L
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT 377
IVSGLE+LH + II+R++ P +VL+DDD RI+D GLA + G Q T AGT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352
Query: 378 VGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
G++APE ++ D ++ GV L ++ + P + E K L
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 26/217 (11%)
Query: 215 ASGEIYIAEL----PESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL 270
A G++++AE P + ++A+K +K D +L K Q AE++T ++H +IV
Sbjct: 27 AFGKVFLAECYNLSPTKDKMLVAVKALK--DPTLAARKDFQREAELLT--NLQHEHIVKF 82
Query: 271 LAHMVRPDCHLLVSEFMKNGSLLEIL------------NDVSQGRRELEWLARHRIARGI 318
D ++V E+MK+G L + L Q + EL IA I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 319 VSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGT 377
SG+ YL H +HR++ + L+ ++ +I DFG++R + + +V +
Sbjct: 143 ASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML-P 198
Query: 378 VGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
+ ++ PE KF+ + D++SFGV+L + GK P
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
E M GSL ++L GR + L + IA ++ GL YL H+ I+HR++ PS++L
Sbjct: 103 EHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNIL 156
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
++ E ++ DFG++ + D A S V GT Y++PE Q +S + DI+S G+ L
Sbjct: 157 VNSRGEIKLCDFGVSGQLIDSMA---NSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSL 212
Query: 405 AVLVMGKLP 413
+ +G+ P
Sbjct: 213 VEMAVGRYP 221
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
E M GSL ++L + R E L + IA ++ GL YL H+ I+HR++ PS++L
Sbjct: 94 EHMDGGSLDQVLKEAK--RIPEEILGKVSIA--VLRGLAYLREKHQ--IMHRDVKPSNIL 147
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
++ E ++ DFG++ + D ++ S V GT Y+APE Q +S + DI+S G+ L
Sbjct: 148 VNSRGEIKLCDFGVSGQLID---SMANSFV-GTRSYMAPERLQGTHYSVQSDIWSMGLSL 203
Query: 405 AVLVMGKLP 413
L +G+ P
Sbjct: 204 VELAVGRYP 212
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 294 EILNDVSQGRRE-LEWLARHR----IARGIVSGLEYLHMYHRPRIIHRNITPSSVLI--D 346
E +N G RE L+++ R + I R I S L YLH I HR+I P + L +
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTN 204
Query: 347 DDMEARIADFGLAR--LMPDGHAQVSTSIVAGTVGYIAPEYHQTLK--FSEKCDIYSFGV 402
E ++ DFGL++ + + AGT ++APE T + KCD +S GV
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 403 LLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKL 447
LL +L+MG +P F + ++ + + + ENPN + S L
Sbjct: 265 LLHLLLMGAVP---FPGVNDADTISQVLNKKLCFENPNYNVLSPL 306
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 42/279 (15%)
Query: 209 EKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
+K+ + GE+++A + +A+K +K ++++ A +M ++H +V
Sbjct: 188 KKLGAGQFGEVWMATY--NKHTKVAVKTMKP---GSMSVEAFLAEANVMKT--LQHDKLV 240
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L A + + ++ ++EFM GSLL+ L ++ L L + I G+ ++
Sbjct: 241 KLHAVVTKEPIYI-ITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQR 297
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
+ IHR++ +++L+ + +IADFGLAR+ + + APE
Sbjct: 298 N---YIHRDLRAANILVSASLVCKIADFGLARVG-----------AKFPIKWTAPEAINF 343
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKL 447
F+ K D++SFG+LL ++ G++P + ++R + P
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIP----YPGMSNPEVIRALERGYRMPRPE------- 392
Query: 448 LGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
N EE ++++ C + PEERP + ++S+L D
Sbjct: 393 --NCPEELYNIMMR----CWKNRPEERPTFEYIQSVLDD 425
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
E M GSL ++L GR + L + IA ++ GL YL H+ I+HR++ PS++L
Sbjct: 84 EHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNIL 137
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
++ E ++ DFG++ + D A GT Y++PE Q +S + DI+S G+ L
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 405 AVLVMGKLP 413
+ +G+ P
Sbjct: 194 VEMAVGRYP 202
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 178 GGQNRGPTIFSPLIEKEDLAFLEK--EDCSASLEKIRSRASGEIYIAELPESNGKMIAIK 235
G ++R PT F E+ L FL++ + S+E R L ++ G+++A+K
Sbjct: 1 GSEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRYDP--------LQDNTGEVVAVK 48
Query: 236 KVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHLLVSEFMKNGSLL 293
K++ L R EI ++H NIV + + L+ E++ GSL
Sbjct: 49 KLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 294 EILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARI 353
+ L + + ++ + + I G+EYL R IHR++ ++L++++ +I
Sbjct: 105 DYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 158
Query: 354 ADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVL 407
DFGL +++P D + + APE KFS D++SFGV+L L
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
E M GSL ++L GR + L + IA ++ GL YL H+ I+HR++ PS++L
Sbjct: 84 EHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNIL 137
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
++ E ++ DFG++ + D A GT Y++PE Q +S + DI+S G+ L
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 405 AVLVMGKLP 413
+ +G+ P
Sbjct: 194 VEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
E M GSL ++L GR + L + IA ++ GL YL H+ I+HR++ PS++L
Sbjct: 84 EHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNIL 137
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
++ E ++ DFG++ + D A GT Y++PE Q +S + DI+S G+ L
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 405 AVLVMGKLP 413
+ +G+ P
Sbjct: 194 VEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
E M GSL ++L GR + L + IA ++ GL YL H+ I+HR++ PS++L
Sbjct: 84 EHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNIL 137
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
++ E ++ DFG++ + D ++ S V GT Y++PE Q +S + DI+S G+ L
Sbjct: 138 VNSRGEIKLCDFGVSGQLID---SMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 405 AVLVMGKLP 413
+ +G+ P
Sbjct: 194 VEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
E M GSL ++L GR + L + IA ++ GL YL H+ I+HR++ PS++L
Sbjct: 84 EHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNIL 137
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
++ E ++ DFG++ + D ++ S V GT Y++PE Q +S + DI+S G+ L
Sbjct: 138 VNSRGEIKLCDFGVSGQLID---SMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 405 AVLVMGKLP 413
+ +G+ P
Sbjct: 194 VEMAVGRYP 202
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
K ++ + E+ + H NIV L M P +V EF+ G L L D + ++
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAH---PIK 120
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDME-----ARIADFGLARLM 362
W + R+ I G+EY+ P I+HR++ ++ + E A++ADFG ++
Sbjct: 121 WSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-- 177
Query: 363 PDGHAQVSTSIVAGTVGYIAPEY--HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDF 417
+ S S + G ++APE + ++EK D YSF ++L ++ G+ P D++
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 215 ASGEIYIAE----LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL 270
A G++++AE LPE + ++A+K +K+ S R+ AE++T ++H++IV
Sbjct: 53 AFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQRE--AELLT--MLQHQHIVRF 108
Query: 271 LAHMVRPDCHLLVSEFMKNGSLLEIL-------------NDVSQGRRELEWLARHRIARG 317
L+V E+M++G L L DV+ G L L +A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA--VASQ 166
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAG 376
+ +G+ YL H +HR++ + L+ + +I DFG++R + + +V +
Sbjct: 167 VAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML- 222
Query: 377 TVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQ--HTEEKSLVRWMRNV 433
+ ++ PE KF+ + D++SFGV+L + GK P ++Q +TE + R +
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---WYQLSNTEAIDCITQGREL 279
Query: 434 MTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSDTA 488
E P RA + V I C +P++R + KDV + L A
Sbjct: 280 ---ERP-RACPPE------------VYAIMRGCWQREPQQRHSIKDVHARLQALA 318
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 215 ASGEIYIAE----LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL 270
A G++++AE LPE + ++A+K +K+ S R+ AE++T ++H++IV
Sbjct: 24 AFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQRE--AELLT--MLQHQHIVRF 79
Query: 271 LAHMVRPDCHLLVSEFMKNGSLLEILN-------------DVSQGRRELEWLARHRIARG 317
L+V E+M++G L L DV+ G L L +A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA--VASQ 137
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAG 376
+ +G+ YL H +HR++ + L+ + +I DFG++R + + +V +
Sbjct: 138 VAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML- 193
Query: 377 TVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQ--HTEEKSLVRWMRNV 433
+ ++ PE KF+ + D++SFGV+L + GK P ++Q +TE + R +
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---WYQLSNTEAIDCITQGREL 250
Query: 434 MTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSDTA 488
E P RA + V I C +P++R + KDV + L A
Sbjct: 251 ---ERP-RACPPE------------VYAIMRGCWQREPQQRHSIKDVHARLQALA 289
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHL 281
L ++ G+++A+KK++ L R EI ++H NIV + +
Sbjct: 37 LQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 92
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
L+ EF+ GSL E L + + ++ + + I G+EYL R IHR++
Sbjct: 93 LIMEFLPYGSLREYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATR 146
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++++ +I DFGL +++P D + + APE KFS D++SF
Sbjct: 147 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 206
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 207 GVVLYEL 213
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
E K+I KK+ D+ L + R R ++H NIV L + H LV +
Sbjct: 58 EYAAKIINTKKLSARDHQKLEREARICRL-------LKHPNIVRLHDSISEEGFHYLVFD 110
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G L E D+ E A H I + LE ++ H+ I+HR++ P ++L+
Sbjct: 111 LVTGGELFE---DIVAREYYSEADASHCIHQI----LESVNHIHQHDIVHRDLKPENLLL 163
Query: 346 DDDMEA---RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
+ ++ADFGLA + G Q AGT GY++PE + + + DI++ GV
Sbjct: 164 ASKCKGAAVKLADFGLA-IEVQGEQQAWFGF-AGTPGYLSPEVLRKDPYGKPVDIWACGV 221
Query: 403 LLAVLVMGKLPSDDFFQH 420
+L +L++G P D QH
Sbjct: 222 ILYILLVGYPPFWDEDQH 239
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 215 ASGEIYIAE----LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL 270
A G++++AE LPE + ++A+K +K+ S R+ AE++T ++H++IV
Sbjct: 30 AFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQRE--AELLT--MLQHQHIVRF 85
Query: 271 LAHMVRPDCHLLVSEFMKNGSLLEILN-------------DVSQGRRELEWLARHRIARG 317
L+V E+M++G L L DV+ G L L +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA--VASQ 143
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAG 376
+ +G+ YL H +HR++ + L+ + +I DFG++R + + +V +
Sbjct: 144 VAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML- 199
Query: 377 TVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQ--HTEEKSLVRWMRNV 433
+ ++ PE KF+ + D++SFGV+L + GK P ++Q +TE + R +
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---WYQLSNTEAIDCITQGREL 256
Query: 434 MTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSDTA 488
E P RA + V I C +P++R + KDV + L A
Sbjct: 257 ---ERP-RACPPE------------VYAIMRGCWQREPQQRHSIKDVHARLQALA 295
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 268 VPLLAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+ L + + + HL LV ++ G LL +L+ + E +AR I +V ++ +H
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED--KLPEDMARFYIGE-MVLAIDSIH 208
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
H +HR+I P +VL+D + R+ADFG M D V +S+ GT YI+PE
Sbjct: 209 QLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD-GTVQSSVAVGTPDYISPEIL 264
Query: 387 QTL-----KFSEKCDIYSFGVLLAVLVMGKLP 413
Q + K+ +CD +S GV + ++ G+ P
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 282 LVSEFMKNGSLLE-ILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
LV+E M+ G LL+ IL RE ++ H I + + EYLH ++HR++ P
Sbjct: 98 LVTELMRGGELLDKILRQKFFSEREASFVL-HTIGKTV----EYLH---SQGVVHRDLKP 149
Query: 341 SSVLIDDDMEA----RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
S++L D+ RI DFG A+ + + + T T ++APE + + E CD
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGCD 207
Query: 397 IYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
I+S G+LL ++ G P + T E+ L R
Sbjct: 208 IWSLGILLYTMLAGYTPFANGPSDTPEEILTR 239
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 268 VPLLAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
+ L + + + HL LV ++ G LL +L+ + E +AR I +V ++ +H
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED--KLPEDMARFYIGE-MVLAIDSIH 192
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
H +HR+I P +VL+D + R+ADFG M D V +S+ GT YI+PE
Sbjct: 193 QLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD-GTVQSSVAVGTPDYISPEIL 248
Query: 387 QTL-----KFSEKCDIYSFGVLLAVLVMGKLP 413
Q + K+ +CD +S GV + ++ G+ P
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 15/135 (11%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRE--LEWLARHRIARGIVSGLEYLHMYHRPRIIHRNIT 339
+V E + SLLE+ RR+ E AR+ R + G++YLH R+IHR++
Sbjct: 119 VVLEICRRRSLLEL-----HKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVIHRDLK 169
Query: 340 PSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
++ ++DDM+ +I DFGLA ++ DG + + GT YIAPE S + DI+
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKIEFDGERK---KTLCGTPNYIAPEVLCKKGHSFEVDIW 226
Query: 399 SFGVLLAVLVMGKLP 413
S G +L L++GK P
Sbjct: 227 SLGCILYTLLVGKPP 241
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 27/236 (11%)
Query: 177 GGGQNRGPTIFSPLIEKEDLAFLEK--EDCSASLEKIRSRASGEIYIAELPESNGKMIAI 234
G ++R PT F E+ L FL++ + S+E R L ++ G+++A+
Sbjct: 2 GAFEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRYDP--------LQDNTGEVVAV 49
Query: 235 KKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHLLVSEFMKNGSL 292
KK++ L R EI ++H NIV + + L+ E++ GSL
Sbjct: 50 KKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
Query: 293 LEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEAR 352
+ L + + ++ + + I G+EYL R IHR++ ++L++++ +
Sbjct: 106 RDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 159
Query: 353 IADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVL 407
I DFGL +++P D + + APE KFS D++SFGV+L L
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 282 LVSEFMKNGSLLE-ILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
LV+E M+ G LL+ IL RE ++ H I + + EYLH ++HR++ P
Sbjct: 98 LVTELMRGGELLDKILRQKFFSEREASFVL-HTIGKTV----EYLH---SQGVVHRDLKP 149
Query: 341 SSVLIDDDMEA----RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
S++L D+ RI DFG A+ + + + T T ++APE + + E CD
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGCD 207
Query: 397 IYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
I+S G+LL ++ G P + T E+ L R
Sbjct: 208 IWSLGILLYTMLAGYTPFANGPSDTPEEILTR 239
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
K ++ + E+ + H NIV L M P +V EF+ G L L D + ++
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAH---PIK 120
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDME-----ARIADFGLARLM 362
W + R+ I G+EY+ P I+HR++ ++ + E A++ADF L++
Sbjct: 121 WSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-- 177
Query: 363 PDGHAQVSTSIVAGTVGYIAPEY--HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDF 417
+ S S + G ++APE + ++EK D YSF ++L ++ G+ P D++
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 44/296 (14%)
Query: 208 LEKIRSRASGEIYIAEL----PESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIR 263
+E++ G++Y L P + +AIK +K L + R E M +++
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR---EEFRHEAMLRARLQ 70
Query: 264 HRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL------------NDVSQGRRELEWLAR 311
H N+V LL + + ++ + +G L E L +D + LE
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 312 HRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR--LMPDGHAQV 369
+ I +G+EYL +H ++H+++ +VL+ D + +I+D GL R D + +
Sbjct: 131 VHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 370 STSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVR 428
S++ + ++APE KFS DI+S+GV+L V G P + + +V
Sbjct: 188 GNSLL--PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY----SNQDVVE 241
Query: 429 WMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSML 484
+RN P+ + L I C+ P RP KD+ S L
Sbjct: 242 MIRNRQVLPCPDDC-----------PAWVYALMIECWNEF--PSRRPRFKDIHSRL 284
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 27/236 (11%)
Query: 177 GGGQNRGPTIFSPLIEKEDLAFLEK--EDCSASLEKIRSRASGEIYIAELPESNGKMIAI 234
G ++R PT F E+ L FL++ + S+E R L ++ G+++A+
Sbjct: 4 GAFEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCR--------YDPLQDNTGEVVAV 51
Query: 235 KKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHLLVSEFMKNGSL 292
KK++ L R EI ++H NIV + + L+ E++ GSL
Sbjct: 52 KKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 107
Query: 293 LEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEAR 352
+ L + + ++ + + I G+EYL R IHR++ ++L++++ +
Sbjct: 108 RDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 161
Query: 353 IADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVL 407
I DFGL +++P D + + APE KFS D++SFGV+L L
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 23/214 (10%)
Query: 215 ASGEIYIAEL----PESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL 270
A G++++AE PE + ++A+K +K ++ R+ AE++T ++H +IV
Sbjct: 25 AFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHRE--AELLT--NLQHEHIVKF 80
Query: 271 LAHMVRPDCHLLVSEFMKNGSLLEILND-------VSQGR--RELEWLARHRIARGIVSG 321
V D ++V E+MK+G L + L +++G EL IA+ I +G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVGY 380
+ YL H +HR++ + L+ +++ +I DFG++R + + +V + + +
Sbjct: 141 MVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML-PIRW 196
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
+ PE KF+ + D++S GV+L + GK P
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 22/250 (8%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMR-QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
+G +A+KKV+ D L++ K R EI Q+ H N++ A + + +V E
Sbjct: 56 DGVPVALKKVQIFD--LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL 113
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
G L ++ + +R + + + S LE HM+ R R++HR+I P++V I
Sbjct: 114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE--HMHSR-RVMHRDIKPANVFIT 170
Query: 347 DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAV 406
++ D GL R + S+V GT Y++PE ++ K DI+S G LL
Sbjct: 171 ATGVVKLGDLGLGRFF-SSKTTAAHSLV-GTPYYMSPERIHENGYNFKSDIWSLGCLLYE 228
Query: 407 LVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFC 466
+ + P + ++ +L + + + P L + Y E++ ++ + C
Sbjct: 229 MAALQSPF-----YGDKMNLYSLCKKIEQCDYP------PLPSDHYSEELRQLVNM---C 274
Query: 467 TLDDPEERPN 476
DPE+RP+
Sbjct: 275 INPDPEKRPD 284
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 15/135 (11%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRE--LEWLARHRIARGIVSGLEYLHMYHRPRIIHRNIT 339
+V E + SLLE+ RR+ E AR+ R + G++YLH R+IHR++
Sbjct: 119 VVLEICRRRSLLEL-----HKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVIHRDLK 169
Query: 340 PSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
++ ++DDM+ +I DFGLA ++ DG + + GT YIAPE S + DI+
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKIEFDGERK---KXLCGTPNYIAPEVLCKKGHSFEVDIW 226
Query: 399 SFGVLLAVLVMGKLP 413
S G +L L++GK P
Sbjct: 227 SLGCILYTLLVGKPP 241
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
E M GSL ++L GR + L + IA ++ GL YL H+ I+HR++ PS++L
Sbjct: 87 EHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNIL 140
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
++ E ++ DFG++ + D +++ V GT Y++PE Q +S + DI+S G+ L
Sbjct: 141 VNSRGEIKLCDFGVSGQLID---EMANEFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSL 196
Query: 405 AVLVMGKLP 413
+ +G+ P
Sbjct: 197 VEMAVGRYP 205
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + Q+R EI +RH NI+ + +
Sbjct: 28 GNVYLAR--EKQNKFIMALKVLFKSQLEKEGVE---HQLRREIEIQSHLRHPNILRMYNY 82
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ EF G L + L GR R A + + LH H ++
Sbjct: 83 FHDRKRIYLMLEFAPRGELYKELQ--KHGR-----FDEQRSATFMEELADALHYCHERKV 135
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 394 KCDIYSFGVLLAVLVMGKLPSDDFFQHTE 422
K D++ GVL ++G +P D HTE
Sbjct: 192 KVDLWCAGVLCYEFLVG-MPPFDSPSHTE 219
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + Q+R EI +RH NI+ + +
Sbjct: 29 GNVYLAR--EKQNKFIMALKVLFKSQLEKEGVE---HQLRREIEIQSHLRHPNILRMYNY 83
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ EF G L + L GR R A + + LH H ++
Sbjct: 84 FHDRKRIYLMLEFAPRGELYKELQ--KHGR-----FDEQRSATFMEELADALHYCHERKV 136
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 394 KCDIYSFGVLLAVLVMGKLPSDDFFQHTE 422
K D++ GVL ++G +P D HTE
Sbjct: 193 KVDLWCAGVLCYEFLVG-MPPFDSPSHTE 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 252 VRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLAR 311
VR EI ++ H NI+ L P LV E + G L + + V +G + +
Sbjct: 95 VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRI--VEKG-----YYSE 147
Query: 312 HRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDD---DMEARIADFGLARLMPDGHAQ 368
A + LE + H I+HR++ P ++L D +IADFGL++++ Q
Sbjct: 148 RDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQ 204
Query: 369 VSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDD 416
V V GT GY APE + + + D++S G++ +L+ G P D
Sbjct: 205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 22/172 (12%)
Query: 264 HRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILND-VSQGRRELEWLARHRIARGIVSGL 322
H NI+ L LV + MK G L + L + V+ +E +I R + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-----KIMRAL---L 134
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIA 382
E + H+ I+HR++ P ++L+DDDM ++ DFG + + G S V GT Y+A
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS---VCGTPSYLA 191
Query: 383 PEYHQT------LKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
PE + + ++ D++S GV++ L+ G P F H ++ ++R
Sbjct: 192 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP----FWHRKQMLMLR 239
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 217 GEIYIAELPESNGKMIAIKKV---KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
G +Y+A E K I KV Q++ + Q+R EI +RH NI+ + +
Sbjct: 28 GNVYLAR--EKQNKFIMALKVLFKSQLEKEGVE---HQLRREIEIQSHLRHPNILRMYNY 82
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
L+ EF G L + L GR R A + + LH H ++
Sbjct: 83 FHDRKRIYLMLEFAPRGELYKELQ--KHGR-----FDEQRSATFMEELADALHYCHERKV 135
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
IHR+I P ++L+ E +IADFG + P + + GT+ Y+ PE + E
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 394 KCDIYSFGVLLAVLVMGKLPSDDFFQHTE 422
K D++ GVL ++G +P D HTE
Sbjct: 192 KVDLWCAGVLCYEFLVG-MPPFDSPSHTE 219
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 15/135 (11%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRE--LEWLARHRIARGIVSGLEYLHMYHRPRIIHRNIT 339
+V E + SLLE+ RR+ E AR+ R + G++YLH R+IHR++
Sbjct: 103 VVLEICRRRSLLEL-----HKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVIHRDLK 153
Query: 340 PSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
++ ++DDM+ +I DFGLA ++ DG + + GT YIAPE S + DI+
Sbjct: 154 LGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTPNYIAPEVLCKKGHSFEVDIW 210
Query: 399 SFGVLLAVLVMGKLP 413
S G +L L++GK P
Sbjct: 211 SLGCILYTLLVGKPP 225
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHL 281
L ++ G+++A+KK++ L R EI ++H NIV + +
Sbjct: 35 LQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 90
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
L+ E++ GSL + L + + ++ + + I G+EYL R IHRN+
Sbjct: 91 LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRNLATR 144
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++++ +I DFGL +++P D + + APE KFS D++SF
Sbjct: 145 NILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSF 204
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 205 GVVLYEL 211
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 15/135 (11%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRE--LEWLARHRIARGIVSGLEYLHMYHRPRIIHRNIT 339
+V E + SLLE+ RR+ E AR+ R + G++YLH R+IHR++
Sbjct: 119 VVLEICRRRSLLEL-----HKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVIHRDLK 169
Query: 340 PSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
++ ++DDM+ +I DFGLA ++ DG + + GT YIAPE S + DI+
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTPNYIAPEVLCKKGHSFEVDIW 226
Query: 399 SFGVLLAVLVMGKLP 413
S G +L L++GK P
Sbjct: 227 SLGCILYTLLVGKPP 241
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 22/172 (12%)
Query: 264 HRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILND-VSQGRRELEWLARHRIARGIVSGL 322
H NI+ L LV + MK G L + L + V+ +E +I R + L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-----TRKIMRAL---L 121
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIA 382
E + H+ I+HR++ P ++L+DDDM ++ DFG + + G V GT Y+A
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE---VCGTPSYLA 178
Query: 383 PEYHQT------LKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
PE + + ++ D++S GV++ L+ G P F H ++ ++R
Sbjct: 179 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP----FWHRKQMLMLR 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 23/195 (11%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLL-----AHMVRPDCHLLVSEF 286
+A+KK+ + SL I R+ E+ ++H N++ LL A + + +
Sbjct: 56 VAVKKLSRPFQSL--IHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
+ L I+ + +++L ++ GL+Y+H IIHR++ PS+V ++
Sbjct: 114 LMGADLNNIVKSQALSDEHVQFLVYQ-----LLRGLKYIH---SAGIIHRDLKPSNVAVN 165
Query: 347 DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH-QTLKFSEKCDIYSFGVLLA 405
+D E RI DFGLAR A + T Y APE + +++ DI+S G ++A
Sbjct: 166 EDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 406 VLVMGK--LPSDDFF 418
L+ GK P D+
Sbjct: 221 ELLQGKALFPGSDYI 235
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 61/281 (21%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLA------HMVRP---- 277
+ + AIKK++ + K+ + +E+M + H+ +V A + V+P
Sbjct: 30 DSRYYAIKKIRHTEE-----KLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84
Query: 278 ---DCHLLVSEFMKNGSLLEILN--DVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPR 332
+ E+ +N +L ++++ +++Q R E W R+ R I+ L Y+H
Sbjct: 85 KKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-W----RLFRQILEALSYIH---SQG 136
Query: 333 IIHRNITPSSVLIDDDMEARIADFGLAR--------------LMPDGHAQVSTSIVAGTV 378
IIHR++ P ++ ID+ +I DFGLA+ +P ++++I GT
Sbjct: 137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI--GTA 194
Query: 379 GYIAPE-YHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSE 437
Y+A E T ++EK D+YS G++ ++ F E ++++ +R+V + E
Sbjct: 195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY------PFSTGMERVNILKKLRSV-SIE 247
Query: 438 NPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSK 478
P D+K M + KI DP +RP ++
Sbjct: 248 FPPDFDDNK---------MKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 15/229 (6%)
Query: 191 IEKEDLAFLEKEDCS--ASLEKIRSRASGEIYIAELPESNGKMIA--IKKVKQVDNSLL- 245
+E E LA E E +++ + S A G ++ A E N +++ IKK K +++ +
Sbjct: 10 VELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIE 69
Query: 246 NIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRE 305
+ K+ +V EI ++ H NI+ +L LV E K+GS L++ + + R
Sbjct: 70 DPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRL 127
Query: 306 LEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDG 365
E LA + I R +VS + YL + IIHR+I +++I +D ++ DFG A + G
Sbjct: 128 DEPLASY-IFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG 183
Query: 366 HAQVSTSIVAGTVGYIAPEYHQTLKF-SEKCDIYSFGVLLAVLVMGKLP 413
+ GT+ Y APE + + +++S GV L LV + P
Sbjct: 184 KLFYT---FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 111/238 (46%), Gaps = 27/238 (11%)
Query: 184 PTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAEL--PESNGKMIAIKKVKQVD 241
P + P+ DL + D E ++ SG +A L + + +++A+K +++ +
Sbjct: 4 PAVSGPM----DLPIMHDSD---RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE 56
Query: 242 NSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQ 301
N+K EI+ +RH NIV ++ P +V E+ G L E +
Sbjct: 57 KIAANVK-----REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE---RICN 108
Query: 302 GRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEAR--IADFGLA 359
R E AR + ++SG+ Y H ++ HR++ + L+D R I DFG +
Sbjct: 109 AGRFSEDEARFFFQQ-LISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYS 164
Query: 360 RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDD 416
+ H+Q +++ GT YIAPE ++ K D++S GV L V+++G P +D
Sbjct: 165 K-SSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L+ + S A G + A + G +AIKK+ + S L K R R E+ +RH N+
Sbjct: 30 LQPVGSGAYGAVCSA-VDGRTGAKVAIKKLYRPFQSELFAK-RAYR-ELRLLKHMRHENV 86
Query: 268 VPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVS 320
+ LL + PD L LV FM L +++ G +++L ++
Sbjct: 87 IGLL-DVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFLVYQ-----MLK 139
Query: 321 GLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
GL Y+H IIHR++ P ++ +++D E +I DFGLAR +++ +V T Y
Sbjct: 140 GLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVV--TRWY 191
Query: 381 IAPEY-HQTLKFSEKCDIYSFGVLLAVLVMGK 411
APE +++++ DI+S G ++A ++ GK
Sbjct: 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 27/233 (11%)
Query: 180 QNRGPTIFSPLIEKEDLAFLEK--EDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKV 237
++R PT F E+ L FL++ + S+E R L ++ G+++A+KK+
Sbjct: 6 EDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRYDP--------LQDNTGEVVAVKKL 53
Query: 238 KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHLLVSEFMKNGSLLEI 295
+ L R EI ++H NIV + + L+ E++ GSL +
Sbjct: 54 QHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 109
Query: 296 LNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
L + + ++ + + I G+EYL R IHR++ ++L++++ +I D
Sbjct: 110 L---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGD 163
Query: 356 FGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVL 407
FGL +++P D + + APE KFS D++SFGV+L L
Sbjct: 164 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 99
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G++YL +
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLA---SKKF 153
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL---PVKWMALESLQT 210
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 239
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
E K+I KK+ D+ L + R R ++H NIV L + H LV +
Sbjct: 31 EYAAKIINTKKLSARDHQKLEREARICRL-------LKHSNIVRLHDSISEEGFHYLVFD 83
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G L E D+ E A H I + LE + H+ ++HR++ P ++L+
Sbjct: 84 LVTGGELFE---DIVAREYYSEADASHCIQQI----LEAVLHCHQMGVVHRDLKPENLLL 136
Query: 346 DDDMEA---RIADFGLA-RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+ ++ADFGLA + D A AGT GY++PE + + + DI++ G
Sbjct: 137 ASKCKGAAVKLADFGLAIEVQGDQQAWFG---FAGTPGYLSPEVLRKEAYGKPVDIWACG 193
Query: 402 VLLAVLVMGKLPSDDFFQH 420
V+L +L++G P D QH
Sbjct: 194 VILYILLVGYPPFWDEDQH 212
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G++YL +
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLA---SKKF 154
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 211
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 27/233 (11%)
Query: 180 QNRGPTIFSPLIEKEDLAFLEK--EDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKV 237
++R PT F E+ L FL++ + S+E R L ++ G+++A+KK+
Sbjct: 4 EDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRYDP--------LQDNTGEVVAVKKL 51
Query: 238 KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHLLVSEFMKNGSLLEI 295
+ L R EI ++H NIV + + L+ E++ GSL +
Sbjct: 52 QHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 107
Query: 296 LNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
L + + ++ + + I G+EYL R IHR++ ++L++++ +I D
Sbjct: 108 L---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGD 161
Query: 356 FGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVL 407
FGL +++P D + + APE KFS D++SFGV+L L
Sbjct: 162 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 36 GCVYHGTLLDNDGKKIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 92
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G++YL +
Sbjct: 93 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLA---SKKF 146
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 203
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 232
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD-GHAQVSTSIVAG 376
I + L+ H+ IIHR++ P++++I ++ DFG+AR + D G++ T+ V G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 377 TVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP----SDD--FFQHTEEKSLVRWM 430
T Y++PE + + D+YS G +L ++ G+ P S D +QH E +
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSA 241
Query: 431 RN 432
R+
Sbjct: 242 RH 243
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 62 GCVYHGTLLDNDGKKIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 118
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G++YL +
Sbjct: 119 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLA---SKKF 172
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 229
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 258
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 23/194 (11%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLL-----AHMVRPDCHLLVSEF 286
+A+KK+ + SL I R+ E+ ++H N++ LL A + + +
Sbjct: 48 VAVKKLSRPFQSL--IHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 105
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
+ L I+ + +++L ++ GL+Y+H IIHR++ PS+V ++
Sbjct: 106 LMGADLNNIVKCQALSDEHVQFLVYQ-----LLRGLKYIH---SAGIIHRDLKPSNVAVN 157
Query: 347 DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH-QTLKFSEKCDIYSFGVLLA 405
+D E RI DFGLAR A + T Y APE + +++ DI+S G ++A
Sbjct: 158 EDCELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 212
Query: 406 VLVMGK--LPSDDF 417
L+ GK P D+
Sbjct: 213 ELLQGKALFPGSDY 226
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 41 GCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQFLTEGIIMKDFSHPNVLSLLGIC 97
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G++YL +
Sbjct: 98 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLA---SKKF 151
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 208
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 237
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 30/242 (12%)
Query: 178 GGQNRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKV 237
G Q R PT + + K E + +L + S A G + A G +A+KK+
Sbjct: 1 GSQER-PTFYRQELNK---TIWEVPERYQNLSPVGSGAYGSV-CAAFDTKTGLRVAVKKL 55
Query: 238 KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHL-------LVSEFMKNG 290
+ S+++ K R R E+ ++H N++ LL + P L LV+ M
Sbjct: 56 SRPFQSIIHAK-RTYR-ELRLLKHMKHENVIGLL-DVFTPARSLEEFNDVYLVTHLMGAD 112
Query: 291 SLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDME 350
LN++ + ++ + + I + I+ GL+Y+H IIHR++ PS++ +++D E
Sbjct: 113 -----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 351 ARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH-QTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGLAR H + T Y APE + +++ DI+S G ++A L+
Sbjct: 164 LKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 410 GK 411
G+
Sbjct: 219 GR 220
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD-GHAQVSTSIVAG 376
I + L+ H+ IIHR++ P+++LI ++ DFG+AR + D G++ T+ V G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 377 TVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP-SDD-----FFQHTEEKSLVRWM 430
T Y++PE + + D+YS G +L ++ G+ P + D +QH E +
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 241
Query: 431 RN 432
R+
Sbjct: 242 RH 243
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 98
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G++YL +
Sbjct: 99 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLA---SKKF 152
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 209
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 238
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G++YL +
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLA---SKKF 154
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 211
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 39 GCVYHGTLLDNDGKKIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 95
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G++YL +
Sbjct: 96 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLA---SKKF 149
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 206
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 63 GCVYHGTLLDNDGKKIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 119
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G++YL +
Sbjct: 120 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLA---SKKF 173
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 230
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 259
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 45/207 (21%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLA------HMVRPDCHL 281
+ + AIKK++ + K+ + +E+ + H+ +V A + V+P +
Sbjct: 30 DSRYYAIKKIRHTEE-----KLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAV 84
Query: 282 -------LVSEFMKNGSLLEILN--DVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPR 332
+ E+ +N +L ++++ +++Q R E W R+ R I+ L Y+H
Sbjct: 85 KKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY-W----RLFRQILEALSYIH---SQG 136
Query: 333 IIHRNITPSSVLIDDDMEARIADFGLAR--------------LMPDGHAQVSTSIVAGTV 378
IIHRN+ P ++ ID+ +I DFGLA+ +P ++++I GT
Sbjct: 137 IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI--GTA 194
Query: 379 GYIAPEY-HQTLKFSEKCDIYSFGVLL 404
Y+A E T ++EK D YS G++
Sbjct: 195 XYVATEVLDGTGHYNEKIDXYSLGIIF 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 24/149 (16%)
Query: 280 HLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM------YHRPRI 333
+LLV E+ NGSL + L+ + +W++ R+A + GL YLH +++P I
Sbjct: 87 YLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 334 IHRNITPSSVLIDDDMEARIADFGLA------RLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
HR++ +VL+ +D I+DFGL+ RL+ G + GT+ Y+APE +
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE 201
Query: 388 ---TLKFSE----KCDIYSFGVLLAVLVM 409
L+ E + D+Y+ G++ + M
Sbjct: 202 GAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHL 281
L ++ G+++A+KK++ L R EI ++H NIV + +
Sbjct: 33 LQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 88
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
L+ E++ GSL + L + + ++ + + I G+EYL R IHR++
Sbjct: 89 LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATR 142
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++++ +I DFGL +++P D + + APE KFS D++SF
Sbjct: 143 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 202
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 203 GVVLYEL 209
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQFLTEGIIMKDFSHPNVLSLLGIC 99
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G++YL +
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLA---SKKF 153
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 210
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 239
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
E K+I KK+ D+ L + R R ++H NIV L + H LV +
Sbjct: 31 EYAAKIINTKKLSARDHQKLEREARICRL-------LKHPNIVRLHDSISEEGFHYLVFD 83
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G L E + V++ E+ + + I LE ++ H I+HR++ P ++L+
Sbjct: 84 LVTGGELFEDI--VAR-----EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLL 136
Query: 346 DDDMEA---RIADFGLA-RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+ ++ADFGLA + D A AGT GY++PE + + + D+++ G
Sbjct: 137 ASKSKGAAVKLADFGLAIEVQGDQQAWFG---FAGTPGYLSPEVLRKDPYGKPVDMWACG 193
Query: 402 VLLAVLVMGKLPSDDFFQH 420
V+L +L++G P D QH
Sbjct: 194 VILYILLVGYPPFWDEDQH 212
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 22/172 (12%)
Query: 264 HRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILND-VSQGRRELEWLARHRIARGIVSGL 322
H NI+ L LV + MK G L + L + V+ +E +I R + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-----KIMRAL---L 134
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIA 382
E + H+ I+HR++ P ++L+DDDM ++ DFG + + G V GT Y+A
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE---VCGTPSYLA 191
Query: 383 PEYHQT------LKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
PE + + ++ D++S GV++ L+ G P F H ++ ++R
Sbjct: 192 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP----FWHRKQMLMLR 239
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
E K+I KK+ D+ L + R R ++H NIV L + H L+ +
Sbjct: 49 EYAAKIINTKKLSARDHQKLEREARICRL-------LKHPNIVRLHDSISEEGHHYLIFD 101
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G L E D+ E A H I + LE + H+ ++HR++ P ++L+
Sbjct: 102 LVTGGELFE---DIVAREYYSEADASHCIQQI----LEAVLHCHQMGVVHRDLKPENLLL 154
Query: 346 DDDMEA---RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
++ ++ADFGLA + +G Q AGT GY++PE + + + D+++ GV
Sbjct: 155 ASKLKGAAVKLADFGLA-IEVEGEQQAWFGF-AGTPGYLSPEVLRKDPYGKPVDLWACGV 212
Query: 403 LLAVLVMGKLPSDDFFQH 420
+L +L++G P D QH
Sbjct: 213 ILYILLVGYPPFWDEDQH 230
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 27/209 (12%)
Query: 211 IRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL 270
+ S A G + + + + +G+ +AIKK+ + S I ++ E++ ++H N++ L
Sbjct: 32 VGSGAYGSV-CSAIDKRSGEKVAIKKLSRPFQS--EIFAKRAYRELLLLKHMQHENVIGL 88
Query: 271 LAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLE 323
L + P L LV FM+ L+ + + ++++L ++ GL+
Sbjct: 89 L-DVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQYLVYQ-----MLKGLK 140
Query: 324 YLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAP 383
Y+H ++HR++ P ++ +++D E +I DFGLAR HA + T Y AP
Sbjct: 141 YIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAP 192
Query: 384 EYHQT-LKFSEKCDIYSFGVLLAVLVMGK 411
E + + +++ DI+S G ++A ++ GK
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHL 281
L ++ G+++A+KK++ L R EI ++H NIV + +
Sbjct: 32 LQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 87
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
L+ E++ GSL + L + + ++ + + I G+EYL R IHR++
Sbjct: 88 LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATR 141
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++++ +I DFGL +++P D + + APE KFS D++SF
Sbjct: 142 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 201
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 202 GVVLYEL 208
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHL 281
L ++ G+++A+KK++ L R EI ++H NIV + +
Sbjct: 34 LQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
L+ E++ GSL + L + + ++ + + I G+EYL R IHR++
Sbjct: 90 LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATR 143
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++++ +I DFGL +++P D + + APE KFS D++SF
Sbjct: 144 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 203
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 204 GVVLYEL 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHL 281
L ++ G+++A+KK++ L R EI ++H NIV + +
Sbjct: 34 LQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
L+ E++ GSL + L + + ++ + + I G+EYL R IHR++
Sbjct: 90 LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATR 143
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++++ +I DFGL +++P D + + APE KFS D++SF
Sbjct: 144 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 203
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 204 GVVLYEL 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 27/233 (11%)
Query: 180 QNRGPTIFSPLIEKEDLAFLEK--EDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKV 237
++R PT F E+ L FL++ + S+E R L ++ G+++A+KK+
Sbjct: 3 EDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRYDP--------LQDNTGEVVAVKKL 50
Query: 238 KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHLLVSEFMKNGSLLEI 295
+ L R EI ++H NIV + + L+ E++ GSL +
Sbjct: 51 QHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 106
Query: 296 LNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
L ++ ++ L + I G+EYL R IHR++ ++L++++ +I D
Sbjct: 107 LQAHAERIDHIKLL---QYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGD 160
Query: 356 FGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVL 407
FGL +++P D + + APE KFS D++SFGV+L L
Sbjct: 161 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 27/209 (12%)
Query: 211 IRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL 270
+ S A G + + + + +G+ +AIKK+ + S I ++ E++ ++H N++ L
Sbjct: 50 VGSGAYGSV-CSAIDKRSGEKVAIKKLSRPFQS--EIFAKRAYRELLLLKHMQHENVIGL 106
Query: 271 LAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLE 323
L + P L LV FM+ L+ + + ++++L ++ GL+
Sbjct: 107 L-DVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGMEFSEEKIQYLVYQ-----MLKGLK 158
Query: 324 YLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAP 383
Y+H ++HR++ P ++ +++D E +I DFGLAR HA + T Y AP
Sbjct: 159 YIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAP 210
Query: 384 EYHQT-LKFSEKCDIYSFGVLLAVLVMGK 411
E + + +++ DI+S G ++A ++ GK
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 17/234 (7%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
LEK+ + +Y L ++ G +A+K+VK +S +R EI +++H NI
Sbjct: 10 LEKLGNGTYATVYKG-LNKTTGVYVALKEVKL--DSEEGTPSTAIR-EISLMKELKHENI 65
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR--RELEWLARHRIARGIVSGLEYL 325
V L + + LV EFM N L + ++ + G R LE ++ GL +
Sbjct: 66 VRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE- 384
H +I+HR++ P ++LI+ + ++ DFGLAR S+ +V T+ Y AP+
Sbjct: 125 H---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYRAPDV 179
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSEN 438
+ +S DI+S G +LA ++ GK F T ++ ++ + ++M + N
Sbjct: 180 LMGSRTYSTSIDIWSCGCILAEMITGK----PLFPGTNDEEQLKLIFDIMGTPN 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 23/195 (11%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLL-----AHMVRPDCHLLVSEF 286
+A+KK+ + SL I R+ E+ ++H N++ LL A + + +
Sbjct: 56 VAVKKLSRPFQSL--IHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
+ L I+ + +++L ++ GL+Y+H IIHR++ PS+V ++
Sbjct: 114 LMGADLNNIVKCQALSDEHVQFLVYQ-----LLRGLKYIH---SAGIIHRDLKPSNVAVN 165
Query: 347 DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH-QTLKFSEKCDIYSFGVLLA 405
+D E RI DFGLAR A + T Y APE + +++ DI+S G ++A
Sbjct: 166 EDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 406 VLVMGK--LPSDDFF 418
L+ GK P D+
Sbjct: 221 ELLQGKALFPGSDYI 235
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
E K+I KK+ D+ L + R R ++H NIV L + H LV +
Sbjct: 31 EYAAKIINTKKLSARDHQKLEREARICRL-------LKHPNIVRLHDSISEEGFHYLVFD 83
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G L E D+ E A H I + LE ++ H I+HR++ P ++L+
Sbjct: 84 LVTGGELFE---DIVAREYYSEADASHCIQQI----LESVNHCHLNGIVHRDLKPENLLL 136
Query: 346 DDDMEA---RIADFGLA-RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+ ++ADFGLA + D A AGT GY++PE + + + D+++ G
Sbjct: 137 ASKSKGAAVKLADFGLAIEVQGDQQAWFG---FAGTPGYLSPEVLRKDPYGKPVDMWACG 193
Query: 402 VLLAVLVMGKLPSDDFFQH 420
V+L +L++G P D QH
Sbjct: 194 VILYILLVGYPPFWDEDQH 212
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 138/283 (48%), Gaps = 48/283 (16%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRA----EIMTAGQI 262
S KI ++G + +A + +G+ +A+K +++++ +Q R E++
Sbjct: 49 SYVKIGEGSTGIVCLAR-EKHSGRQVAVK--------MMDLRKQQRRELLFNEVVIMRDY 99
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
+H N+V + + + ++ EF++ G+L +I VSQ R E +A + ++ L
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI---VSQVRLNEEQIAT--VCEAVLQAL 154
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI-----VAGT 377
YLH +IHR+I S+L+ D +++DFG AQ+S + + GT
Sbjct: 155 AYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFC-------AQISKDVPKRKXLVGT 204
Query: 378 VGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSE 437
++APE ++ + DI+S G+++ +V G+ P +F + +++ R +R+ +
Sbjct: 205 PYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP---YFSDSPVQAMKR-LRDSPPPK 260
Query: 438 NPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDV 480
N S +L + + E+ML + DP+ER ++++
Sbjct: 261 LKNSHKVSPVLRD-FLERML----------VRDPQERATAQEL 292
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 30/243 (12%)
Query: 177 GGGQNRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKK 236
G Q R PT + + K E + +L + S A G + A G +A+KK
Sbjct: 11 GMSQER-PTFYRQELNK---TIWEVPERYQNLSPVGSGAYGSV-CAAFDTKTGLRVAVKK 65
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHL-------LVSEFMKN 289
+ + S+++ K R R E+ ++H N++ LL + P L LV+ M
Sbjct: 66 LSRPFQSIIHAK-RTYR-ELRLLKHMKHENVIGLL-DVFTPARSLEEFNDVYLVTHLMGA 122
Query: 290 GSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
LN++ + ++ + + I + I+ GL+Y+H IIHR++ PS++ +++D
Sbjct: 123 D-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDX 173
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH-QTLKFSEKCDIYSFGVLLAVLV 408
E +I DFGLAR H + T Y APE + +++ DI+S G ++A L+
Sbjct: 174 ELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 409 MGK 411
G+
Sbjct: 229 TGR 231
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L I S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 31 NLSPIGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 87
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 88 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 140
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRW 192
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 31/231 (13%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 22 NLSPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 78
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 79 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 131
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 183
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLV 427
Y APE + +++ DI+S G ++A L+ G+ P D H ++ L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQLKLI 231
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 32/250 (12%)
Query: 177 GGGQNRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKK 236
G Q R PT + + K E + +L + S A G + A G +A+KK
Sbjct: 11 GMSQER-PTFYRQELNK---TIWEVPERYQNLSPVGSGAYGSV-CAAFDTKTGLRVAVKK 65
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHL-------LVSEFMKN 289
+ + S+++ K R R E+ ++H N++ LL + P L LV+ M
Sbjct: 66 LSRPFQSIIHAK-RTYR-ELRLLKHMKHENVIGLL-DVFTPARSLEEFNDVYLVTHLMGA 122
Query: 290 GSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
LN++ + ++ + + I + I+ GL+Y+H IIHR++ PS++ +++D
Sbjct: 123 D-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDC 173
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH-QTLKFSEKCDIYSFGVLLAVLV 408
E +I DFGLAR H + T Y APE + +++ DI+S G ++A L+
Sbjct: 174 ELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 409 MGK--LPSDD 416
G+ P D
Sbjct: 229 TGRTLFPGTD 238
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 31/231 (13%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 22 NLSPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 78
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 79 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 131
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRW 183
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLV 427
Y APE + +++ DI+S G ++A L+ G+ P D H ++ L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQLKLI 231
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
E +I KK+ D+ L + R R ++H NIV L + H L+ +
Sbjct: 38 EYAAMIINTKKLSARDHQKLEREARICRL-------LKHPNIVRLHDSISEEGHHYLIFD 90
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ G L E D+ E A H I + LE + H+ ++HRN+ P ++L+
Sbjct: 91 LVTGGELFE---DIVAREYYSEADASHCIQQI----LEAVLHCHQMGVVHRNLKPENLLL 143
Query: 346 DDDMEA---RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
++ ++ADFGLA + +G Q AGT GY++PE + + + D+++ GV
Sbjct: 144 ASKLKGAAVKLADFGLA-IEVEGEQQAWFGF-AGTPGYLSPEVLRKDPYGKPVDLWACGV 201
Query: 403 LLAVLVMGKLPSDDFFQH 420
+L +L++G P D QH
Sbjct: 202 ILYILLVGYPPFWDEDQH 219
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 36 NLAPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 92
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 93 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 145
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 197
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 228 NGKMIAIKKVKQVD-NSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
G+ A+K V S + ++ E ++H +IV LL +V EF
Sbjct: 48 TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107
Query: 287 MKNGSL-LEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
M L EI+ G E +A H + R I+ L Y H IIHR++ P +VL+
Sbjct: 108 MDGADLCFEIVKRADAGFVYSEAVASHYM-RQILEALRYCH---DNNIIHRDVKPENVLL 163
Query: 346 ---DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
++ ++ DFG+A + G + + GT ++APE + + + D++ GV
Sbjct: 164 ASKENSAPVKLGDFGVAIQL--GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGV 221
Query: 403 LLAVLVMGKLPSDDFFQHTEEK 424
+L +L+ G LP F T+E+
Sbjct: 222 ILFILLSGCLP----FYGTKER 239
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD-GHAQVSTSIVAG 376
I + L+ H+ IIHR++ P++++I ++ DFG+AR + D G++ T+ V G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 377 TVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP-SDD-----FFQHTEEKSLVRWM 430
T Y++PE + + D+YS G +L ++ G+ P + D +QH E +
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 241
Query: 431 RN 432
R+
Sbjct: 242 RH 243
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD-GHAQVSTSIVAG 376
I + L+ H+ IIHR++ P++++I ++ DFG+AR + D G++ T+ V G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 377 TVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP-SDD-----FFQHTEEKSLVRWM 430
T Y++PE + + D+YS G +L ++ G+ P + D +QH E +
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 241
Query: 431 RN 432
R+
Sbjct: 242 RH 243
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 45 NLSPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 101
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 102 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 154
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 206
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD-GHAQVSTSIVAG 376
I + L+ H+ IIHR++ P++++I ++ DFG+AR + D G++ T+ V G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 377 TVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP-SDD-----FFQHTEEKSLVRWM 430
T Y++PE + + D+YS G +L ++ G+ P + D +QH E +
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 241
Query: 431 RN 432
R+
Sbjct: 242 RH 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHL 281
L ++ G+++A+KK++ L R EI ++H NIV + +
Sbjct: 52 LQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 107
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
L+ E++ GSL + L + + ++ + + I G+EYL R IHR++
Sbjct: 108 LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATR 161
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++++ +I DFGL +++P D + + APE KFS D++SF
Sbjct: 162 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 221
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 222 GVVLYEL 228
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 29/243 (11%)
Query: 177 GGGQNRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKK 236
G PT + + K E + +L + S A G + A G +A+KK
Sbjct: 1 GSHSQERPTFYRQELNK---TIWEVPERYQNLSPVGSGAYGSV-CAAFDTKTGLRVAVKK 56
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHL-------LVSEFMKN 289
+ + S+++ K R R E+ ++H N++ LL + P L LV+ M
Sbjct: 57 LSRPFQSIIHAK-RTYR-ELRLLKHMKHENVIGLL-DVFTPARSLEEFNDVYLVTHLMGA 113
Query: 290 GSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
LN++ + ++ + + I + I+ GL+Y+H IIHR++ PS++ +++D
Sbjct: 114 D-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDC 164
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH-QTLKFSEKCDIYSFGVLLAVLV 408
E +I DFGLAR H + T Y APE + +++ DI+S G ++A L+
Sbjct: 165 ELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 409 MGK 411
G+
Sbjct: 220 TGR 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 46 NLSPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 102
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 103 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 155
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 207
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHL 281
L ++ G+++A+KK++ L R EI ++H NIV + +
Sbjct: 52 LQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 107
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
L+ E++ GSL + L + + ++ + + I G+EYL R IHR++
Sbjct: 108 LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATR 161
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++++ +I DFGL +++P D + + APE KFS D++SF
Sbjct: 162 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 221
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 222 GVVLYEL 228
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 30/242 (12%)
Query: 178 GGQNRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKV 237
G Q R PT + + K E + +L + S A G + A G +A+KK+
Sbjct: 1 GSQER-PTFYRQELNK---TIWEVPERYQNLSPVGSGAYGSV-CAAFDTKTGLRVAVKKL 55
Query: 238 KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHL-------LVSEFMKNG 290
+ S+++ K R R E+ ++H N++ LL + P L LV+ M
Sbjct: 56 SRPFQSIIHAK-RTYR-ELRLLKHMKHENVIGLL-DVFTPARSLEEFNDVYLVTHLMGAD 112
Query: 291 SLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDME 350
LN++ + ++ + + I + I+ GL+Y+H IIHR++ PS++ +++D E
Sbjct: 113 -----LNNIVKSQKLTDDHVQFLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDSE 163
Query: 351 ARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH-QTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGL R H + T Y APE + +++ DI+S G ++A L+
Sbjct: 164 LKILDFGLCR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 410 GK 411
G+
Sbjct: 219 GR 220
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 13/195 (6%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
S GK+ ++KV + D+ L +A + ++R + +LA + P L F
Sbjct: 40 SFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAF 99
Query: 287 MKNGSLLEILNDVSQG----RRELEWLARHRIARGIVS----GLEYLHMYHRPRIIHRNI 338
G L IL+ + G R E + + ++ GL++LH II+R++
Sbjct: 100 QTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL---GIIYRDL 156
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
P ++L+D++ ++ DFGL++ D H + + S GTV Y+APE S D +
Sbjct: 157 KPENILLDEEGHIKLTDFGLSKEAID-HEKKAYSF-CGTVEYMAPEVVNRQGHSHSADWW 214
Query: 399 SFGVLLAVLVMGKLP 413
S+GVL+ ++ G LP
Sbjct: 215 SYGVLMFEMLTGSLP 229
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKXQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 32 NLSPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 88
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 89 VIGLLD-VFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 141
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 193
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 209 EKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
E+I GE++ L ++ ++A+K ++ L K Q A I+ Q H NIV
Sbjct: 120 EQIGRGNFGEVFSGRL-RADNTLVAVKSCRETLPPDLKAKFLQ-EARILK--QYSHPNIV 175
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L+ + +V E ++ G L L ++G R L ++ +G+EYL
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGAR-LRVKTLLQMVGDAAAGMEYLESK 232
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
IHR++ + L+ + +I+DFG++R DG S + V + APE
Sbjct: 233 C---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNY 289
Query: 389 LKFSEKCDIYSFGVLL 404
++S + D++SFG+LL
Sbjct: 290 GRYSSESDVWSFGILL 305
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 38 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSKPFQSIIHAK-RTYR-ELRLLKHMKHEN 94
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 95 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 147
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 199
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 33/251 (13%)
Query: 189 PLIEKEDLA--FLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLN 246
P +++LA E + +L + S A G + A G +A+KK+ + S+++
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIH 60
Query: 247 IKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDV 299
K R R E+ ++H N++ LL + P L LV+ M L I+
Sbjct: 61 AK-RTYR-ELRLLKHMKHENVIGLL-DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCA 116
Query: 300 SQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLA 359
+++L I+ GL+Y+H IIHR++ PS++ +++D E +I DFGLA
Sbjct: 117 KLTDDHVQFLIYQ-----ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 360 RLMPDGHAQVSTSIVAGTVGYIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK--LPSDD 416
R H + T Y APE + +++ DI+S G ++A L+ G+ P D
Sbjct: 169 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223
Query: 417 FFQHTEEKSLV 427
H ++ L+
Sbjct: 224 ---HIDQLKLI 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQFLTEGIIMKDFSHPNVLSLLGIC 101
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G+++L +
Sbjct: 102 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLA---SKKF 155
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PVKWMALESLQT 212
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 241
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 31 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 87
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 88 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 140
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 192
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 25 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 81
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 82 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 134
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 135 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 186
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 33 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 89
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 90 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 142
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 194
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 28 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 84
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 85 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 137
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 189
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 38 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 94
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 95 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 147
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 199
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 38 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 94
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 95 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 147
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 199
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 31 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 87
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 88 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 140
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRW 192
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKXQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQFLTEGIIMKDFSHPNVLSLLGIC 98
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G+++L +
Sbjct: 99 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLA---SKKF 152
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PVKWMALESLQT 209
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 238
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G+++L +
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLA---SKKF 154
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PVKWMALESLQT 211
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 32 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 88
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 89 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 141
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 193
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQFLTEGIIMKDFSHPNVLSLLGIC 101
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G+++L +
Sbjct: 102 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLA---SKKF 155
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL---PVKWMALESLQT 212
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 49 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 105
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 106 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 158
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 210
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK--LPSDD 416
Y APE + +++ DI+S G ++A L+ G+ P D
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 250
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 23 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 79
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 80 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 132
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 184
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 31 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 87
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 88 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 140
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 192
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 33 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 89
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 90 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 142
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRW 194
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 33 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 89
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 90 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 142
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRW 194
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 28 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 84
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 85 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 137
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 189
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 33 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 89
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 90 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 142
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRW 194
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 22/241 (9%)
Query: 199 LEKEDCSASLEKIRSRASGEIYIAE-LPESNGKMIAIKKVKQVDNSLLNIKMRQVRA-EI 256
L + C K R G Y+ + + G+ +AIK+ +Q L+ K R+ EI
Sbjct: 9 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE----LSPKNRERWCLEI 64
Query: 257 MTAGQIRHRNIVPL------LAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLA 310
++ H N+V L + D LL E+ + G L + LN E
Sbjct: 65 QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 124
Query: 311 RHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA---RIADFGLARLMPDGHA 367
R ++ I S L YLH RIIHR++ P ++++ + +I D G A+ + G
Sbjct: 125 RTLLS-DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-- 178
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLV 427
++ T V GT+ Y+APE + K++ D +SFG L + G P +Q + V
Sbjct: 179 ELCTEFV-GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 237
Query: 428 R 428
R
Sbjct: 238 R 238
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 31/231 (13%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 22 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 78
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 79 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 131
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 183
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLV 427
Y APE + +++ DI+S G ++A L+ G+ P D H ++ L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQLKLI 231
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 31/231 (13%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 24 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 80
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 81 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 133
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 134 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 185
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLV 427
Y APE + +++ DI+S G ++A L+ G+ P D H ++ L+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQLKLI 233
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD-GHAQVSTSIVAG 376
I + L+ H+ IIHR++ P++++I ++ DFG+AR + D G++ T+ V G
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 377 TVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP-SDD-----FFQHTEEKSLVRWM 430
T Y++PE + + D+YS G +L ++ G+ P + D +QH E +
Sbjct: 199 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 258
Query: 431 RN 432
R+
Sbjct: 259 RH 260
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 23 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 79
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 80 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 132
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 184
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 22/241 (9%)
Query: 199 LEKEDCSASLEKIRSRASGEIYIAE-LPESNGKMIAIKKVKQVDNSLLNIKMRQVRA-EI 256
L + C K R G Y+ + + G+ +AIK+ +Q L+ K R+ EI
Sbjct: 8 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE----LSPKNRERWCLEI 63
Query: 257 MTAGQIRHRNIVPL------LAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLA 310
++ H N+V L + D LL E+ + G L + LN E
Sbjct: 64 QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 123
Query: 311 RHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA---RIADFGLARLMPDGHA 367
R ++ I S L YLH RIIHR++ P ++++ + +I D G A+ + G
Sbjct: 124 RTLLS-DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-- 177
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLV 427
++ T V GT+ Y+APE + K++ D +SFG L + G P +Q + V
Sbjct: 178 ELCTEFV-GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236
Query: 428 R 428
R
Sbjct: 237 R 237
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 46 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 102
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 103 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 155
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 207
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 32 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 88
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 89 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 141
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRW 193
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--LAHMVRPDCHL 281
L ++ G+++A+KK++ L R EI ++H NIV + +
Sbjct: 34 LQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
L+ E++ GSL + L + + ++ + + I G+EYL R IHR++
Sbjct: 90 LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATR 143
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++++ +I DFGL +++P D + + APE KFS D++SF
Sbjct: 144 NILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSF 203
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 204 GVVLYEL 210
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G+++L +
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLA---SKKF 154
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PVKWMALESLQT 211
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 115/255 (45%), Gaps = 32/255 (12%)
Query: 188 SPLIEKEDLAFLEK--EDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
PL++ E+ +EK E + K R++ +GE+ +A+KK++ +D
Sbjct: 1 GPLVDMENFQKVEKIGEGTYGVVYKARNKLTGEV------------VALKKIR-LDTETE 47
Query: 246 NIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRE 305
+ +R EI ++ H NIV LL + + LV EF+ L+ D S
Sbjct: 48 GVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA---- 100
Query: 306 LEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDG 365
L + I + L+ L H R++HR++ P ++LI+ + ++ADFGLAR
Sbjct: 101 LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 160
Query: 366 HAQVSTSIVAGTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTE 422
+ +V T+ Y APE K +S DI+S G + A +V + P D +E
Sbjct: 161 VRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SE 213
Query: 423 EKSLVRWMRNVMTSE 437
L R R + T +
Sbjct: 214 IDQLFRIFRTLGTPD 228
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 282 LVSEFMKNGSLLE-ILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
+V+E MK G LL+ IL RE + I +EYLH ++HR++ P
Sbjct: 93 VVTELMKGGELLDKILRQKFFSEREAS-----AVLFTITKTVEYLHA---QGVVHRDLKP 144
Query: 341 SSVLIDDDM----EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
S++L D+ RI DFG A+ + + + T T ++APE + + CD
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLERQGYDAACD 202
Query: 397 IYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
I+S GVLL ++ G P + T E+ L R
Sbjct: 203 IWSLGVLLYTMLTGYTPFANGPDDTPEEILAR 234
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 28 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 84
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 85 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 137
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRW 189
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 209 EKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
E+I GE++ L ++ ++A+K ++ L K Q A I+ Q H NIV
Sbjct: 120 EQIGRGNFGEVFSGRL-RADNTLVAVKSCRETLPPDLKAKFLQ-EARILK--QYSHPNIV 175
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
L+ + +V E ++ G L L ++G R L ++ +G+EYL
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGAR-LRVKTLLQMVGDAAAGMEYLE-- 230
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
IHR++ + L+ + +I+DFG++R DG S + V + APE
Sbjct: 231 -SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY 289
Query: 389 LKFSEKCDIYSFGVLL 404
++S + D++SFG+LL
Sbjct: 290 GRYSSESDVWSFGILL 305
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 49 GCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQFLTEGIIMKDFSHPNVLSLLGIC 105
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G+++L +
Sbjct: 106 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLA---SKKF 159
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PVKWMALESLQT 216
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 245
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 10/164 (6%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
AE+M ++ H +V L + LV+EFM++G L + L +G E L
Sbjct: 54 AEVMM--KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLR-TQRGLFAAETLLG-- 108
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+ + G+ YL +IHR++ + L+ ++ +++DFG+ R + D ST
Sbjct: 109 MCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG- 164
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
V + +PE ++S K D++SFGVL+ V GK+P ++
Sbjct: 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 45 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 101
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 102 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 154
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 206
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 111/238 (46%), Gaps = 27/238 (11%)
Query: 184 PTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAEL--PESNGKMIAIKKVKQVD 241
P + P+ DL + D E ++ +G +A L + +++A+K +++ +
Sbjct: 4 PAVAGPM----DLPIMHDSD---RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE 56
Query: 242 NSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQ 301
N+K EI+ +RH NIV ++ P +V E+ G L E +
Sbjct: 57 KIDENVKR-----EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE---RICN 108
Query: 302 GRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEAR--IADFGLA 359
R E AR + ++SG+ Y H ++ HR++ + L+D R IADFG +
Sbjct: 109 AGRFSEDEARF-FFQQLISGVSYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYS 164
Query: 360 RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDD 416
+ H+Q +++ GT YIAPE ++ K D++S GV L V+++G P +D
Sbjct: 165 K-ASVLHSQPKSAV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
G +Y L +++GK I A+K + ++ + ++ Q E + H N++ LL
Sbjct: 103 GCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQFLTEGIIMKDFSHPNVLSLLGIC 159
Query: 275 VRPD-CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+R + L+V +MK+G L + + + + + + G+++L +
Sbjct: 160 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLA---SKKF 213
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDG-----HAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++D+ ++ADFGLAR M D H + + V ++A E QT
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PVKWMALESLQT 270
Query: 389 LKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
KF+ K D++SFGVLL ++ G P D
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPYPD 299
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 32 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 88
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 89 VIGLLD-VFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 141
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 193
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRP---DCHL-LVSEFMKNGSLLEIL--NDVSQGRR 304
Q E+ + ++H NI+ + R D L L++ F + GSL + L N VS
Sbjct: 64 QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVS---- 119
Query: 305 ELEWLARHRIARGIVSGLEYLHM-------YHRPRIIHRNITPSSVLIDDDMEARIADFG 357
W IA + GL YLH H+P I HR+I +VL+ +++ A IADFG
Sbjct: 120 ---WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176
Query: 358 LARLMPDGHAQVSTSIVAGTVGYIAPEYHQ-TLKFSE----KCDIYSFGVLL 404
LA G + T GT Y+APE + + F + D+Y+ G++L
Sbjct: 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 251 QVRAEI-MTAGQIRHRNIVPLLAHMVRP------DCHLLVSEFMKNGSLLEILNDVSQGR 303
+++ EI M HRNI ++ D LV EF GS+ +++ +
Sbjct: 66 EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT 125
Query: 304 RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP 363
+ EW+A I R I+ GL +LH + ++IHR+I +VL+ ++ E ++ DFG++ +
Sbjct: 126 LKEEWIAY--ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180
Query: 364 DGHAQVSTSIVAGTVGYIAPEY-----HQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ +T I GT ++APE + + K D++S G+ + G P
Sbjct: 181 RTVGRRNTFI--GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 49 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 105
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 106 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 158
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H T
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGYVATRW 210
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 46 NLSPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 102
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 103 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 155
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H T
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGXVATRW 207
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 9 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 65
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 119
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 177
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 225
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 195 DLAFLEKEDCSASLEKIRSRASGEIYIAEL--PESNGKMIAIKKVKQVDNSLLNIKMRQV 252
DL + D E ++ SG +A L + + +++A+K +++ + N+K
Sbjct: 10 DLPIMHDSD---RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKR--- 63
Query: 253 RAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH 312
EI+ +RH NIV ++ P +V E+ G L E + R E AR
Sbjct: 64 --EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE---RICNAGRFSEDEARF 118
Query: 313 RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEAR--IADFGLARLMPDGHAQVS 370
+ ++SG+ Y H ++ HR++ + L+D R I DFG ++ H+Q
Sbjct: 119 FFQQ-LISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPK 173
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDD 416
+++ GT YIAPE ++ K D++S GV L V+++G P +D
Sbjct: 174 STV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 218
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 8 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 64
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 118
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 224
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 11 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 67
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQD--LKTFMDASA----LTGIPLPLIKSYLFQLLQGLAF 121
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 179
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 227
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
G+ +AIKK+ + + N K R +R E+ +H NI+ + ++RP + EF
Sbjct: 79 TGQQVAIKKIPNAFDVVTNAK-RTLR-ELKILKHFKHDNII-AIKDILRPT--VPYGEFK 133
Query: 288 KNGSLLEIL-NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
+L+++ +D+ Q + L + + L L H ++IHR++ PS++L++
Sbjct: 134 SVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN 193
Query: 347 DDMEARIADFGLARLM---PDGHAQVSTSIVAGTVGYIAPEYHQTL-KFSEKCDIYSFGV 402
++ E +I DFG+AR + P H T VA T Y APE +L ++++ D++S G
Sbjct: 194 ENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-TRWYRAPELMLSLHEYTQAIDLWSVGC 252
Query: 403 LLAVLV 408
+ ++
Sbjct: 253 IFGEML 258
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 8 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 64
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLSF 118
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 224
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 7 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 63
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 117
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 175
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 223
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 15 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 71
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 125
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 183
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 231
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 8 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 64
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 118
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 224
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 7 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 63
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 117
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 175
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I D+GLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 8 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 64
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 118
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 224
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 8 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 64
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 118
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 224
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 15 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 71
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 125
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 183
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 231
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 11/183 (6%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
G+ +AIKK+ + + N K R +R E+ +H NI+ + ++RP + EF
Sbjct: 78 TGQQVAIKKIPNAFDVVTNAK-RTLR-ELKILKHFKHDNII-AIKDILRPT--VPYGEFK 132
Query: 288 KNGSLLEIL-NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
+L+++ +D+ Q + L + + L L H ++IHR++ PS++L++
Sbjct: 133 SVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN 192
Query: 347 DDMEARIADFGLARLM---PDGHAQVSTSIVAGTVGYIAPEYHQTL-KFSEKCDIYSFGV 402
++ E +I DFG+AR + P H T VA T Y APE +L ++++ D++S G
Sbjct: 193 ENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-TRWYRAPELMLSLHEYTQAIDLWSVGC 251
Query: 403 LLA 405
+
Sbjct: 252 IFG 254
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
AE+M ++ H +V L + LV EFM++G L + L +G E L
Sbjct: 53 AEVMM--KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLG-- 107
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+ + G+ YL +IHR++ + L+ ++ +++DFG+ R + D ST
Sbjct: 108 MCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG- 163
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
V + +PE ++S K D++SFGVL+ V GK+P ++
Sbjct: 164 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK + + N++ E + + H ++V LL + P L V++ M +G
Sbjct: 47 VAIKILNETTGPKANVEFMD---EALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGC 102
Query: 292 LLEILN---DVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LLE ++ D + L W + I G+ YL R++HR++ +VL+
Sbjct: 103 LLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE---ERRLVHRDLAARNVLVKSP 153
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVL 407
+I DFGLARL+ + + + ++A E KF+ + D++S+GV + ++
Sbjct: 154 NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 213
Query: 408 VMGKLPSD 415
G P D
Sbjct: 214 TFGGKPYD 221
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 38/248 (15%)
Query: 207 SLEKIRSRAS-GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
S+ +I R GE+Y ++ GKM A+K + + IKM+Q G+
Sbjct: 191 SVHRIIGRGGFGEVYGCRKADT-GKMYAMKCLDKK-----RIKMKQ--------GETLAL 236
Query: 266 NIVPLLAHMVRPDCHLLV--SEFMKNGSLLEILNDVSQGRRELEWLARHRI--------- 314
N +L+ + DC +V S L + D+ G L++H +
Sbjct: 237 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 296
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
A I+ GLE HM++R +++R++ P+++L+D+ RI+D GLA S
Sbjct: 297 AAEIILGLE--HMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 375 AGTVGYIAPEYHQT-LKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQH-TEEKSLVRWMRN 432
GT GY+APE Q + + D +S G +L L+ G P F QH T++K + M
Sbjct: 351 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTL 406
Query: 433 VMTSENPN 440
M E P+
Sbjct: 407 TMAVELPD 414
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 38/248 (15%)
Query: 207 SLEKIRSRAS-GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
S+ +I R GE+Y ++ GKM A+K + + IKM+Q G+
Sbjct: 192 SVHRIIGRGGFGEVYGCRKADT-GKMYAMKCLDKK-----RIKMKQ--------GETLAL 237
Query: 266 NIVPLLAHMVRPDCHLLV--SEFMKNGSLLEILNDVSQGRRELEWLARHRI--------- 314
N +L+ + DC +V S L + D+ G L++H +
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
A I+ GLE HM++R +++R++ P+++L+D+ RI+D GLA S
Sbjct: 298 AAEIILGLE--HMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 375 AGTVGYIAPEYHQT-LKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQH-TEEKSLVRWMRN 432
GT GY+APE Q + + D +S G +L L+ G P F QH T++K + M
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTL 407
Query: 433 VMTSENPN 440
M E P+
Sbjct: 408 TMAVELPD 415
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 11 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 67
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 121
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 179
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 227
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 38/248 (15%)
Query: 207 SLEKIRSRAS-GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
S+ +I R GE+Y ++ GKM A+K + + IKM+Q G+
Sbjct: 192 SVHRIIGRGGFGEVYGCRKADT-GKMYAMKCLDKK-----RIKMKQ--------GETLAL 237
Query: 266 NIVPLLAHMVRPDCHLLV--SEFMKNGSLLEILNDVSQGRRELEWLARHRI--------- 314
N +L+ + DC +V S L + D+ G L++H +
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
A I+ GLE HM++R +++R++ P+++L+D+ RI+D GLA S
Sbjct: 298 AAEIILGLE--HMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 375 AGTVGYIAPEYHQT-LKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQH-TEEKSLVRWMRN 432
GT GY+APE Q + + D +S G +L L+ G P F QH T++K + M
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTL 407
Query: 433 VMTSENPN 440
M E P+
Sbjct: 408 TMAVELPD 415
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 38/248 (15%)
Query: 207 SLEKIRSRAS-GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
S+ +I R GE+Y ++ GKM A+K + + IKM+Q G+
Sbjct: 192 SVHRIIGRGGFGEVYGCRKADT-GKMYAMKCLDKK-----RIKMKQ--------GETLAL 237
Query: 266 NIVPLLAHMVRPDCHLLV--SEFMKNGSLLEILNDVSQGRRELEWLARHRI--------- 314
N +L+ + DC +V S L + D+ G L++H +
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
A I+ GLE HM++R +++R++ P+++L+D+ RI+D GLA S
Sbjct: 298 AAEIILGLE--HMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 375 AGTVGYIAPEYHQT-LKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQH-TEEKSLVRWMRN 432
GT GY+APE Q + + D +S G +L L+ G P F QH T++K + M
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTL 407
Query: 433 VMTSENPN 440
M E P+
Sbjct: 408 TMAVELPD 415
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
AE+M ++ H +V L + LV EFM++G L + L +G E L
Sbjct: 51 AEVMM--KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLG-- 105
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+ + G+ YL +IHR++ + L+ ++ +++DFG+ R + D ST
Sbjct: 106 MCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG- 161
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
V + +PE ++S K D++SFGVL+ V GK+P ++
Sbjct: 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 11 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 67
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 121
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 179
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 227
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 10 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 66
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 120
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 178
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 226
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 12 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 68
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 122
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 180
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 228
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
AE+M ++ H +V L + LV EFM++G L + L +G E L
Sbjct: 56 AEVMM--KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLG-- 110
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+ + G+ YL +IHR++ + L+ ++ +++DFG+ R + D ST
Sbjct: 111 MCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG- 166
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
V + +PE ++S K D++SFGVL+ V GK+P ++
Sbjct: 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + + +G IA+KK+ + S+++ K R R E+ ++H N
Sbjct: 55 TLSPVGSGAYGSV-CSSYDVKSGLKIAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 111
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 112 VIGLLD-VFTPATSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 164
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DFGLAR H + T
Sbjct: 165 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRW 216
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK--LPSDD 416
Y APE + ++ DI+S G ++A L+ G+ P D
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTD 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
AE+M ++ H +V L + LV EFM++G L + L +G E L
Sbjct: 53 AEVMM--KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLG-- 107
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+ + G+ YL +IHR++ + L+ ++ +++DFG+ R + D ST
Sbjct: 108 MCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG- 163
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
V + +PE ++S K D++SFGVL+ V GK+P ++
Sbjct: 164 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 9 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 65
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 119
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 177
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 225
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 8 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 64
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 118
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 224
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 9 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 65
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 119
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 177
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 225
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 7 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 63
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 117
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 175
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 223
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 8 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 64
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 118
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 224
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 9 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 65
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 119
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 177
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 225
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 22/191 (11%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL 296
VK ++ +I+ R R M HRN++ L+ D LV E M+ GS+L +
Sbjct: 43 VKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHI 102
Query: 297 NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDME---ARI 353
+ RR L + + + S L++L H I HR++ P ++L + + +I
Sbjct: 103 HK----RRHFNELEASVVVQDVASALDFL---HNKGIAHRDLKPENILCEHPNQVSPVKI 155
Query: 354 ADFGLA---RLMPDGHAQVSTS---IVAGTVGYIAPEYHQTLK-----FSEKCDIYSFGV 402
DFGL +L D + +ST G+ Y+APE + + ++CD++S GV
Sbjct: 156 CDFGLGSGIKLNGDC-SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGV 214
Query: 403 LLAVLVMGKLP 413
+L +L+ G P
Sbjct: 215 ILYILLSGYPP 225
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 10 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 66
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 120
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 178
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 226
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 10 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 66
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 120
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 178
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 226
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 8 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 64
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 118
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 224
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 7 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 63
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 117
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 175
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 223
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 313 RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTS 372
+IA IV LE+LH + +IHR++ PS+VLI+ + ++ DFG++ + D V+ +
Sbjct: 157 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKT 211
Query: 373 IVAGTVGYIAPE-YHQTLK---FSEKCDIYSFGVLLAVLVMGKLPSDDF 417
I AG Y+APE + L +S K DI+S G+ + L + + P D +
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 260
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 8 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 64
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKDFMDASA----LTGIPLPLIKSYLFQLLQGLAF 118
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 224
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRP---DCHL-LVSEFMKNGSLLEILNDVSQGRREL 306
Q EI + ++H N++ +A R + L L++ F GSL + L +
Sbjct: 55 QSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKG-----NII 109
Query: 307 EWLARHRIARGIVSGLEYLHM--------YHRPRIIHRNITPSSVLIDDDMEARIADFGL 358
W +A + GL YLH H+P I HR+ +VL+ D+ A +ADFGL
Sbjct: 110 TWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGL 169
Query: 359 ARLMPDGHAQVSTSIVAGTVGYIAPEYHQ-TLKFSE----KCDIYSFGVLLAVLV----M 409
A G T GT Y+APE + + F + D+Y+ G++L LV
Sbjct: 170 AVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKA 229
Query: 410 GKLPSDDFFQHTEEK 424
P D++ EE+
Sbjct: 230 ADGPVDEYMLPFEEE 244
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR 313
AE+M ++ H +V L + LV EFM++G L + L +G E L
Sbjct: 73 AEVMM--KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLG-- 127
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+ + G+ YL +IHR++ + L+ ++ +++DFG+ R + D ST
Sbjct: 128 MCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG- 183
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDD 416
V + +PE ++S K D++SFGVL+ V GK+P ++
Sbjct: 184 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 227
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK + + N++ E + + H ++V LL + P L V++ M +G
Sbjct: 70 VAIKILNETTGPKANVEFMD---EALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGC 125
Query: 292 LLEILN---DVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LLE ++ D + L W + I G+ YL R++HR++ +VL+
Sbjct: 126 LLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE---ERRLVHRDLAARNVLVKSP 176
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVL 407
+I DFGLARL+ + + + ++A E KF+ + D++S+GV + ++
Sbjct: 177 NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 236
Query: 408 VMGKLPSD 415
G P D
Sbjct: 237 TFGGKPYD 244
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 27/238 (11%)
Query: 184 PTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAEL--PESNGKMIAIKKVKQVD 241
P + P+ DL + D E ++ SG +A L + + +++A+K +++ +
Sbjct: 4 PAVSGPM----DLPIMHDSD---RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE 56
Query: 242 NSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQ 301
N+K EI+ +RH NIV ++ P +V E+ G L E +
Sbjct: 57 KIDENVK-----REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE---RICN 108
Query: 302 GRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEAR--IADFGLA 359
R E AR + ++SG+ Y H ++ HR++ + L+D R I FG +
Sbjct: 109 AGRFSEDEARFFFQQ-LISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYS 164
Query: 360 RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDD 416
+ H+Q +++ GT YIAPE ++ K D++S GV L V+++G P +D
Sbjct: 165 K-SSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 9 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 65
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSMD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 119
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 177
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 225
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 11 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 67
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 121
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 179
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 227
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 228 NGKMIAIKKVKQVD-NSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
G+ A+K V S + ++ E ++H +IV LL +V EF
Sbjct: 48 TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107
Query: 287 MKNGSL-LEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
M L EI+ G E +A H + R I+ L Y H IIHR++ P VL+
Sbjct: 108 MDGADLCFEIVKRADAGFVYSEAVASHYM-RQILEALRYCH---DNNIIHRDVKPHCVLL 163
Query: 346 ---DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
++ ++ FG+A + G + + GT ++APE + + + D++ GV
Sbjct: 164 ASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGV 221
Query: 403 LLAVLVMGKLPSDDFFQHTEEK 424
+L +L+ G LP F T+E+
Sbjct: 222 ILFILLSGCLP----FYGTKER 239
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 10 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 66
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSMD--LKDFMDASA----LTGIPLPLIKSYLFQLLQGLAF 120
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 178
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 226
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 276 RPDCHLLVSEFMKNGSLLEILNDVSQGRR--ELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+ C + EF G+L + + + RR +L+ + + I G++Y+H ++
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWI----EKRRGEKLDKVLALELFEQITKGVDYIH---SKKL 157
Query: 334 IHRNITPSSVLIDDDMEARIADFGL-ARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFS 392
IHR++ PS++ + D + +I DFGL L DG S GT+ Y++PE + +
Sbjct: 158 IHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS----KGTLRYMSPEQISSQDYG 213
Query: 393 EKCDIYSFGVLLAVLV 408
++ D+Y+ G++LA L+
Sbjct: 214 KEVDLYALGLILAELL 229
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I DF LAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 28/220 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I FGLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK--LPSDD 416
Y APE + +++ DI+S G ++A L+ G+ P D
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 11 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 67
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMD--LKDFMDASA----LTGIPLPLIKSYLFQLLQGLAF 121
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 179
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 227
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I +A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 28 NLKPIGSGAQG-IVVAAYDAILERNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKVVNHKN 84
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILN-DVSQG-RRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E+++ ++SQ + EL+ + ++ G+++
Sbjct: 85 IIGLL-NVFTPQKSL--EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKH 141
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 195
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMG 410
+ + E DI+S GV++ ++ G
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 39/245 (15%)
Query: 217 GEIYIAELPES--NGKMIAIKKVKQVDNSLLNIKMRQVRA---EIMTAGQIRHRNIVPLL 271
G +Y E + N AIK + ++ +M+QV A E + + H N++ L+
Sbjct: 35 GVVYHGEYIDQAQNRIQCAIKSLSRI------TEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 272 AHMVRPDC--HLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYH 329
M+ P+ H+L+ +M +G LL+ + + + ++ + G+EYL
Sbjct: 89 GIMLPPEGLPHVLLP-YMCHGDLLQFIRSPQRNPTVKDLIS---FGLQVARGMEYLA--- 141
Query: 330 RPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD---------GHAQVSTSIVAGTVGY 380
+ +HR++ + ++D+ ++ADFGLAR + D HA++ V +
Sbjct: 142 EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP-------VKW 194
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPN 440
A E QT +F+ K D++SFGVLL L+ P ++H + L ++ P
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP---YRHIDPFDLTHFLAQGRRLPQPE 251
Query: 441 RAIDS 445
DS
Sbjct: 252 YCPDS 256
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 121/282 (42%), Gaps = 34/282 (12%)
Query: 200 EKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTA 259
+ E + L +I + G +Y A N +++AIKK+ N K + + E+
Sbjct: 51 DPEKLFSDLREIGHGSFGAVYFAR-DVRNSEVVAIKKMS-YSGKQSNEKWQDIIKEVRFL 108
Query: 260 GQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++RH N + +R LV E+ GS ++L + +E+E A + G +
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAA---VTHGAL 164
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL YLH ++ +IHR++ ++L+ + ++ DFG A +M + GT
Sbjct: 165 QGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPY 215
Query: 380 YIAPEYHQTL---KFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTS 436
++APE + ++ K D++S G+ L K P F +L +N
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQN---- 268
Query: 437 ENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSK 478
+S L +G+ + +C + P++RP S+
Sbjct: 269 -------ESPALQSGHWSEYFRNFVDSCLQKI--PQDRPTSE 301
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 228 NGKMIAIKKVKQVD-NSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
G+ A+K V S + ++ E ++H +IV LL +V EF
Sbjct: 50 TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 109
Query: 287 MKNGSL-LEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
M L EI+ G E +A H + R I+ L Y H IIHR++ P VL+
Sbjct: 110 MDGADLCFEIVKRADAGFVYSEAVASHYM-RQILEALRYCH---DNNIIHRDVKPHCVLL 165
Query: 346 ---DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
++ ++ FG+A + G + + GT ++APE + + + D++ GV
Sbjct: 166 ASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGV 223
Query: 403 LLAVLVMGKLPSDDFFQHTEEK 424
+L +L+ G LP F T+E+
Sbjct: 224 ILFILLSGCLP----FYGTKER 241
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 121/282 (42%), Gaps = 34/282 (12%)
Query: 200 EKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTA 259
+ E + L +I + G +Y A N +++AIKK+ N K + + E+
Sbjct: 12 DPEKLFSDLREIGHGSFGAVYFAR-DVRNSEVVAIKKMS-YSGKQSNEKWQDIIKEVRFL 69
Query: 260 GQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++RH N + +R LV E+ GS ++L + +E+E A + G +
Sbjct: 70 QKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAA---VTHGAL 125
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL YLH ++ +IHR++ ++L+ + ++ DFG A +M + GT
Sbjct: 126 QGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPY 176
Query: 380 YIAPEYHQTL---KFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTS 436
++APE + ++ K D++S G+ L K P F +L +N
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQN---- 229
Query: 437 ENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSK 478
+S L +G+ + +C + P++RP S+
Sbjct: 230 -------ESPALQSGHWSEYFRNFVDSCLQKI--PQDRPTSE 262
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 28/206 (13%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLA--HMVRPDCHLLVSE 285
G + AIK + S L Q+R E ++ H+NIV L A +L+ E
Sbjct: 33 TGDLFAIKVFNNI--SFLRPVDVQMR-EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89
Query: 286 FMKNGSLLEILNDVSQ--GRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSV 343
F GSL +L + S G E E+L + R +V G+ +L I+HRNI P ++
Sbjct: 90 FCPCGSLYTVLEEPSNAYGLPESEFLI---VLRDVVGGMNHLR---ENGIVHRNIKPGNI 143
Query: 344 L--IDDDMEA--RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL--------KF 391
+ I +D ++ ++ DFG AR + D VS + GT Y+ P+ ++ K+
Sbjct: 144 MRVIGEDGQSVYKLTDFGAARELEDDEQFVS---LYGTEEYLHPDMYERAVLRKDHQKKY 200
Query: 392 SEKCDIYSFGVLLAVLVMGKLPSDDF 417
D++S GV G LP F
Sbjct: 201 GATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+ K++ +D + +R EI ++ H NI
Sbjct: 8 VEKIGEGTYGVVYKAR-NKLTGEVVALXKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 64
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 118
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 224
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+ K++ +D + +R EI ++ H NI
Sbjct: 7 VEKIGEGTYGVVYKAR-NKLTGEVVALXKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 63
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV EF+ L+ D S L + I + L+ L
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 117
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 175
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 223
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 248 KMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELE 307
+++ + E+M Q RH N+V + + P +++ K +L ++ D + L+
Sbjct: 72 QLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD---AKIVLD 128
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGL---ARLMPD 364
+IA+ IV G+ YLH I+H+++ +V D+ + I DFGL + ++
Sbjct: 129 VNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQA 184
Query: 365 GHAQVSTSIVAGTVGYIAPEY---------HQTLKFSEKCDIYSFGVLLAVLVMGKLPSD 415
G + I G + ++APE L FS+ D+++ G + L + P
Sbjct: 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244
Query: 416 DFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERP 475
T+ + W + T PN + +G G E + I FC + EERP
Sbjct: 245 -----TQPAEAIIW--QMGTGMKPNLS----QIGMGKE-----ISDILLFCWAFEQEERP 288
Query: 476 NSKDVRSML 484
+ ML
Sbjct: 289 TFTKLMDML 297
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIK--MRQVRAEIMTAGQIRHR 265
LEK+ + G + E +GK +++ VK + +L+ M E+ + HR
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L ++ P + V+E GSLL+ L QG L L+R+ + + G+ YL
Sbjct: 76 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQ--VAEGMGYL 131
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP--DGHAQVSTSIVAGTVGYIAP 383
R IHR++ ++L+ +I DFGL R +P D H V + AP
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-YVMQEHRKVPFAWCAP 187
Query: 384 EYHQTLKFSEKCDIYSFGVLL 404
E +T FS D + FGV L
Sbjct: 188 ESLKTRTFSHASDTWMFGVTL 208
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 282 LVSEFMKNGSLLE-ILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
+V+E K G LL+ IL RE + I +EYLH ++HR++ P
Sbjct: 93 VVTELXKGGELLDKILRQKFFSEREAS-----AVLFTITKTVEYLHA---QGVVHRDLKP 144
Query: 341 SSVLIDDDM----EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
S++L D+ RI DFG A+ + + + T T ++APE + + CD
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY--TANFVAPEVLERQGYDAACD 202
Query: 397 IYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
I+S GVLL + G P + T E+ L R
Sbjct: 203 IWSLGVLLYTXLTGYTPFANGPDDTPEEILAR 234
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIK--MRQVRAEIMTAGQIRHR 265
LEK+ + G + E +GK +++ VK + +L+ M E+ + HR
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L ++ P + V+E GSLL+ L QG L L+R+ + + G+ YL
Sbjct: 82 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQ--VAEGMGYL 137
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP--DGHAQVSTSIVAGTVGYIAP 383
R IHR++ ++L+ +I DFGL R +P D H V + AP
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX-VMQEHRKVPFAWCAP 193
Query: 384 EYHQTLKFSEKCDIYSFGVLL 404
E +T FS D + FGV L
Sbjct: 194 ESLKTRTFSHASDTWMFGVTL 214
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIK--MRQVRAEIMTAGQIRHR 265
LEK+ + G + E +GK +++ VK + +L+ M E+ + HR
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L ++ P + V+E GSLL+ L QG L L+R+ + + G+ YL
Sbjct: 72 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQ--VAEGMGYL 127
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP--DGHAQVSTSIVAGTVGYIAP 383
R IHR++ ++L+ +I DFGL R +P D H V + AP
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX-VMQEHRKVPFAWCAP 183
Query: 384 EYHQTLKFSEKCDIYSFGVLL 404
E +T FS D + FGV L
Sbjct: 184 ESLKTRTFSHASDTWMFGVTL 204
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 313 RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTS 372
+IA IV LE+LH + +IHR++ PS+VLI+ + ++ DFG++ + D V+
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD---DVAKD 167
Query: 373 IVAGTVGYIAPE-YHQTLK---FSEKCDIYSFGVLLAVLVMGKLPSDDF 417
I AG Y+APE + L +S K DI+S G+ + L + + P D +
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 216
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 184 PTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNS 243
P +F E ED+ F D L I + G++ I + ++ KM A+K + +
Sbjct: 3 PPVFD---ENEDVNF----DHFEILRAIGKGSFGKVCIVQKNDTK-KMYAMKYMNKQKCV 54
Query: 244 LLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR 303
N ++R V E+ + H +V L + +V + + G L L +
Sbjct: 55 ERN-EVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK 113
Query: 304 RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP 363
E L +V L+YL RIIHR++ P ++L+D+ I DF +A ++P
Sbjct: 114 EETVKL----FICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166
Query: 364 DGHAQVSTSIVAGTVGYIAPEYHQTLK---FSEKCDIYSFGVLLAVLVMGKLP 413
Q++T +AGT Y+APE + K +S D +S GV L+ G+ P
Sbjct: 167 -RETQITT--MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I D GLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIK--MRQVRAEIMTAGQIRHR 265
LEK+ + G + E +GK +++ VK + +L+ M E+ + HR
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L ++ P + V+E GSLL+ L QG L L+R+ + + G+ YL
Sbjct: 82 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQ--VAEGMGYL 137
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP--DGHAQVSTSIVAGTVGYIAP 383
R IHR++ ++L+ +I DFGL R +P D H V + AP
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-YVMQEHRKVPFAWCAP 193
Query: 384 EYHQTLKFSEKCDIYSFGVLL 404
E +T FS D + FGV L
Sbjct: 194 ESLKTRTFSHASDTWMFGVTL 214
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR--------- 313
+H+NI+ LL + ++ E+ G+L E L E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 314 ---IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
A + G+EYL + IHR++ +VL+ +D +IADFGLAR +
Sbjct: 152 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVLL + +G P
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIK--MRQVRAEIMTAGQIRHR 265
LEK+ + G + E +GK +++ VK + +L+ M E+ + HR
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L ++ P + V+E GSLL+ L QG L L+R+ + + G+ YL
Sbjct: 72 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQ--VAEGMGYL 127
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP--DGHAQVSTSIVAGTVGYIAP 383
R IHR++ ++L+ +I DFGL R +P D H V + AP
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-YVMQEHRKVPFAWCAP 183
Query: 384 EYHQTLKFSEKCDIYSFGVLL 404
E +T FS D + FGV L
Sbjct: 184 ESLKTRTFSHASDTWMFGVTL 204
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 27/238 (11%)
Query: 184 PTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAEL--PESNGKMIAIKKVKQVD 241
P + P+ DL + D E ++ SG +A L + + +++A+K +++ +
Sbjct: 4 PAVSGPM----DLPIMHDSD---RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE 56
Query: 242 NSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQ 301
N+K EI+ +RH NIV ++ P +V E+ G L E +
Sbjct: 57 KIDENVK-----REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE---RICN 108
Query: 302 GRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEAR--IADFGLA 359
R E AR + ++SG+ Y H ++ HR++ + L+D R I FG +
Sbjct: 109 AGRFSEDEARFFFQQ-LISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYS 164
Query: 360 RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDD 416
+ H+Q ++ GT YIAPE ++ K D++S GV L V+++G P +D
Sbjct: 165 K-SSVLHSQPKDTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIK--MRQVRAEIMTAGQIRHR 265
LEK+ + G + E +GK +++ VK + +L+ M E+ + HR
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L ++ P + V+E GSLL+ L QG L L+R+ + + G+ YL
Sbjct: 76 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQ--VAEGMGYL 131
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP--DGHAQVSTSIVAGTVGYIAP 383
R IHR++ ++L+ +I DFGL R +P D H V + AP
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-YVMQEHRKVPFAWCAP 187
Query: 384 EYHQTLKFSEKCDIYSFGVLL 404
E +T FS D + FGV L
Sbjct: 188 ESLKTRTFSHASDTWMFGVTL 208
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
LV E++ +G L + L + R L+ + I G+EYL R +HR++
Sbjct: 87 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 140
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++ + +IADFGLA+L+P D V + + APE FS + D++SF
Sbjct: 141 NILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 200
Query: 401 GVLL 404
GV+L
Sbjct: 201 GVVL 204
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR--------- 313
+H+NI+ LL + ++ E+ G+L E L E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 314 ---IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
A + G+EYL + IHR++ +VL+ +D +IADFGLAR +
Sbjct: 152 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVLL + +G P
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIK--MRQVRAEIMTAGQIRHR 265
LEK+ + G + E +GK +++ VK + +L+ M E+ + HR
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L ++ P + V+E GSLL+ L QG L L+R+ + + G+ YL
Sbjct: 72 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQ--VAEGMGYL 127
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMP--DGHAQVSTSIVAGTVGYIAP 383
R IHR++ ++L+ +I DFGL R +P D H V + AP
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-YVMQEHRKVPFAWCAP 183
Query: 384 EYHQTLKFSEKCDIYSFGVLL 404
E +T FS D + FGV L
Sbjct: 184 ESLKTRTFSHASDTWMFGVTL 204
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
S GK+ +KK+ D L +A + ++R + +L + P L F
Sbjct: 36 SFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF 95
Query: 287 MKNGSLLEILNDVSQG----RRELEWLARHRIARGIVSGLEY-LHMYHRPRIIHRNITPS 341
G L IL+ + G R E + + ++ L L H II+R++ P
Sbjct: 96 QTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPE 155
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++L+D++ ++ DFGL++ D H + + S GTV Y+APE ++ D +SFG
Sbjct: 156 NILLDEEGHIKLTDFGLSKESID-HEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFG 213
Query: 402 VLLAVLVMGKLP 413
VL+ ++ G LP
Sbjct: 214 VLMFEMLTGTLP 225
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A + K R + +G+ Y A+ IKK +++ +S + ++ E+ +IRH
Sbjct: 26 AIVRKCRQKGTGKEYAAKF---------IKK-RRLSSSRRGVSREEIEREVNILREIRHP 75
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
NI+ L +L+ E + G L + L E E L + + L+ +
Sbjct: 76 NIITLHDIFENKTDVVLILELVSGGELFDFLA-------EKESLTEDEATQFLKQILDGV 128
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H H RI H ++ P ++++ D + ++ DFG+A + G+ + + GT ++
Sbjct: 129 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTPEFV 185
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLV 427
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGETKQETLT 228
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A + K R + +G+ Y A+ IKK +++ +S + ++ E+ +IRH
Sbjct: 19 AIVRKCRQKGTGKEYAAKF---------IKK-RRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
NI+ L +L+ E + G L + L E E L + + L+ +
Sbjct: 69 NIITLHDIFENKTDVVLILELVSGGELFDFLA-------EKESLTEDEATQFLKQILDGV 121
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H H RI H ++ P ++++ D + ++ DFG+A + G+ + + GT ++
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTPEFV 178
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLV 427
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGETKQETLT 221
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR--------- 313
+H+NI+ LL + ++ E+ G+L E L E + H
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 314 ---IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
A + G+EYL + IHR++ +VL+ +D +IADFGLAR +
Sbjct: 141 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVLL + +G P
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I D GLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR--------- 313
+H+NI+ LL + ++ E+ G+L E L E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 314 ---IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
A + G+EYL + IHR++ +VL+ +D +IADFGLAR +
Sbjct: 152 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVLL + +G P
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR--------- 313
+H+NI+ LL + ++ E+ G+L E L E + H
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 314 ---IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
A + G+EYL + IHR++ +VL+ +D +IADFGLAR +
Sbjct: 193 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVLL + +G P
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L++ E M+ G L + + +G + I R I + +++LH ++ I HR++
Sbjct: 81 CLLIIMECMEGGELFSRIQE--RGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDV 135
Query: 339 TPSSVLI---DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + D ++ DFG A+ Q + T Y+APE K+ + C
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAKET----TQNALQTPCYTPYYVAPEVLGPEKYDKSC 191
Query: 396 DIYSFGVLLAVLVMGKLPSDDFFQHT 421
D++S GV++ +L+ G P F+ +T
Sbjct: 192 DMWSLGVIMYILLCGFPP---FYSNT 214
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR--------- 313
+H+NI+ LL + ++ E+ G+L E L E + H
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 314 ---IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
A + G+EYL + IHR++ +VL+ +D +IADFGLAR +
Sbjct: 145 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVLL + +G P
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 97/181 (53%), Gaps = 13/181 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIKK+ + + + K R R E++ + H+NI+ LL ++ P L EF
Sbjct: 52 VAIKKLSRPFQNQTHAK-RAYR-ELVLMKVVNHKNIIGLL-NVFTPQKSL--EEFQDVYI 106
Query: 292 LLEILN-DVSQG-RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
++E+++ ++SQ + EL+ + ++ G+++LH IIHR++ PS++++ D
Sbjct: 107 VMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDA 163
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGLAR G + + T V T Y APE + + E DI+S GV++ ++
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIK 220
Query: 410 G 410
G
Sbjct: 221 G 221
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR--------- 313
+H+NI+ LL + ++ E+ G+L E L E + H
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 314 ---IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
A + G+EYL + IHR++ +VL+ +D +IADFGLAR +
Sbjct: 144 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVLL + +G P
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L + S A G + A G +A+KK+ + S+++ K R R E+ ++H N
Sbjct: 26 NLSPVGSGAYGSV-CAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHEN 82
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
++ LL + P L LV+ M LN++ + ++ + + I + I+
Sbjct: 83 VIGLL-DVFTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
GL+Y+H IIHR++ PS++ +++D E +I D GLAR H + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGYVATRW 187
Query: 380 YIAPEYH-QTLKFSEKCDIYSFGVLLAVLVMGK 411
Y APE + +++ DI+S G ++A L+ G+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L++ E M+ G L + + +G + I R I + +++LH ++ I HR++
Sbjct: 100 CLLIIMECMEGGELFSRIQE--RGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDV 154
Query: 339 TPSSVLI---DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + D ++ DFG A+ Q + T Y+APE K+ + C
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAKET----TQNALQTPCYTPYYVAPEVLGPEKYDKSC 210
Query: 396 DIYSFGVLLAVLVMGKLPSDDFFQHT 421
D++S GV++ +L+ G P F+ +T
Sbjct: 211 DMWSLGVIMYILLCGFPP---FYSNT 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
S GK+ +KK+ D L +A + ++R + +L + P L F
Sbjct: 36 SFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF 95
Query: 287 MKNGSLLEILNDVSQG----RRELEWLARHRIARGIVSGLEY-LHMYHRPRIIHRNITPS 341
G L IL+ + G R E + + ++ L L H II+R++ P
Sbjct: 96 QTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPE 155
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++L+D++ ++ DFGL++ D H + + S GTV Y+APE ++ D +SFG
Sbjct: 156 NILLDEEGHIKLTDFGLSKESID-HEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFG 213
Query: 402 VLLAVLVMGKLP 413
VL+ ++ G LP
Sbjct: 214 VLMFEMLTGTLP 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 7 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 63
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV E + L+ D S L + I + L+ L
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQD--LKTFMDASA----LTGIPLPLIKSYLFQLLQGLAF 117
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR + +V T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 175
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 223
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 28 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKXVNHKN 84
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
I+ LL ++ P L EF ++E+++ ++E L R++ + L +
Sbjct: 85 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLXQVIQME-LDHERMSYLLYQMLXGIK 140
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
H IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPEVI 197
Query: 387 QTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
V E++ G L+ + V + + I+ G L H+ II+R++
Sbjct: 97 FVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG-------LFFLHKRGIIYRDLKLD 149
Query: 342 SVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
+V++D + +IADFG+ + M DG V+T GT YIAPE + + D +++
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDG---VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAY 206
Query: 401 GVLLAVLVMGKLPSD 415
GVLL ++ G+ P D
Sbjct: 207 GVLLYEMLAGQPPFD 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
S GK+ +KK+ D L +A + ++R + +L + P L F
Sbjct: 37 SFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF 96
Query: 287 MKNGSLLEILNDVSQG----RRELEWLARHRIARGIVSGLEY-LHMYHRPRIIHRNITPS 341
G L IL+ + G R E + + ++ L L H II+R++ P
Sbjct: 97 QTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPE 156
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++L+D++ ++ DFGL++ D H + + S GTV Y+APE ++ D +SFG
Sbjct: 157 NILLDEEGHIKLTDFGLSKESID-HEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFG 214
Query: 402 VLLAVLVMGKLP 413
VL+ ++ G LP
Sbjct: 215 VLMFEMLTGTLP 226
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A + K R + +G+ Y A+ IKK +++ +S + ++ E+ +IRH
Sbjct: 40 AIVRKCRQKGTGKEYAAKF---------IKK-RRLXSSRRGVSREEIEREVNILREIRHP 89
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
NI+ L +L+ E + G L + L E E L + + L+ +
Sbjct: 90 NIITLHDIFENKTDVVLILELVSGGELFDFLA-------EKESLTEDEATQFLKQILDGV 142
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H H RI H ++ P ++++ D + ++ DFG+A + G+ + + GT ++
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTPEFV 199
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLV 427
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 200 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGETKQETLT 242
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 28 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKXVNHKN 84
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 85 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 195
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 39/220 (17%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+E I S G+++ A+ +GK IK+VK + + E+ ++ H NI
Sbjct: 16 IELIGSGGFGQVFKAK-HRIDGKTYVIKRVKYNNE--------KAEREVKALAKLDHVNI 66
Query: 268 VPLL----------------AHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRR--ELEWL 309
V + + C + EF G+L + + + RR +L+ +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI----EKRRGEKLDKV 122
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGL-ARLMPDGHAQ 368
+ I G++Y+H ++I+R++ PS++ + D + +I DFGL L DG
Sbjct: 123 LALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX 179
Query: 369 VSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLV 408
S GT+ Y++PE + + ++ D+Y+ G++LA L+
Sbjct: 180 RS----KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 108/242 (44%), Gaps = 27/242 (11%)
Query: 211 IRSRASGEIYIAELPESNGKMIAIKKVKQV-----------DNSLLNIKMR--QVRAEIM 257
IR+ G+ L E + K A+KK ++ +N ++IK + + E+
Sbjct: 36 IRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQ 95
Query: 258 TAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARG 317
I++ + + D ++ E+M+N S+L+ + ++ +
Sbjct: 96 IITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKC 155
Query: 318 IVSGL--EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVA 375
I+ + + ++++ I HR++ PS++L+D + +++DFG + M D + S
Sbjct: 156 IIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS----R 211
Query: 376 GTVGYIAPEY--HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNV 433
GT ++ PE+ +++ K DI+S G+ L V+ +P + + SLV N+
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP------FSLKISLVELFNNI 265
Query: 434 MT 435
T
Sbjct: 266 RT 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 33/244 (13%)
Query: 181 NRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPES--NGKMIAIKKVK 238
+R P PL D+ + D + ++ SG +A L +++A+K ++
Sbjct: 2 DRAPVTTGPL----DMPIMHDSD---RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE 54
Query: 239 Q---VDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEI 295
+ +D + V+ EI+ +RH NIV ++ P ++ E+ G L E
Sbjct: 55 RGAAIDEN--------VQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE- 105
Query: 296 LNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEAR--I 353
+ R E AR + ++SG+ Y H +I HR++ + L+D R I
Sbjct: 106 --RICNAGRFSEDEARF-FFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKI 159
Query: 354 ADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEK-CDIYSFGVLLAVLVMGKL 412
DFG ++ H+Q +++ GT YIAPE ++ K D++S GV L V+++G
Sbjct: 160 CDFGYSK-SSVLHSQPKSTV--GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAY 216
Query: 413 PSDD 416
P +D
Sbjct: 217 PFED 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 66 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 122
Query: 267 IVPLLAHMVRPDCHL-------LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
I+ LL ++ P L LV E M + +L +++ + EL+ + ++
Sbjct: 123 IISLL-NVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHERMSYLLYQML 174
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVG 379
G+++LH IIHR++ PS++++ D +I DFGLAR G + + T V T
Sbjct: 175 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRY 228
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
Y APE + + E DI+S G ++ +V K+ P D+
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 268
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 229 GKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLA--HMVRPDCHLLVSEF 286
G + AIK + S L Q+R E ++ H+NIV L A +L+ EF
Sbjct: 34 GDLFAIKVFNNI--SFLRPVDVQMR-EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90
Query: 287 MKNGSLLEILNDVSQ--GRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
GSL +L + S G E E+L + R +V G+ +L I+HRNI P +++
Sbjct: 91 CPCGSLYTVLEEPSNAYGLPESEFLI---VLRDVVGGMNHLR---ENGIVHRNIKPGNIM 144
Query: 345 --IDDDMEA--RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL--------KFS 392
I +D ++ ++ DFG AR + D V + GT Y+ P+ ++ K+
Sbjct: 145 RVIGEDGQSVYKLTDFGAARELEDDEQFVX---LYGTEEYLHPDMYERAVLRKDHQKKYG 201
Query: 393 EKCDIYSFGVLLAVLVMGKLPSDDF 417
D++S GV G LP F
Sbjct: 202 ATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
LV E++ +G L + L + R L+ + I G+EYL R +HR++
Sbjct: 90 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 143
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++ + +IADFGLA+L+P D V + + APE FS + D++SF
Sbjct: 144 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 203
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 204 GVVLYEL 210
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHL-L 282
+PE I + +K +++ + V ++ G + H +IV LL + P L L
Sbjct: 53 IPEGESIKIPVC-IKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG--LCPGSSLQL 109
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V++++ GSLL + V Q R L I G+ YL + ++HRN+ +
Sbjct: 110 VTQYLPLGSLL---DHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARN 163
Query: 343 VLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
VL+ + ++ADFG+A L+P Q+ S + ++A E K++ + D++S+GV
Sbjct: 164 VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGV 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 28 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKXVNHKN 84
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 85 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 195
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 66 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 122
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 123 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 179
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 180 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 233
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 268
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
LV E++ +G L + L + R L+ + I G+EYL R +HR++
Sbjct: 91 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 144
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++ + +IADFGLA+L+P D V + + APE FS + D++SF
Sbjct: 145 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 204
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 205 GVVLYEL 211
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 24/195 (12%)
Query: 227 SNGKMIAIKK--------VKQVDNSLLNIKMRQ-VRAEIMTAGQIRHRNIVPLLAHMVRP 277
S GK I +K +K+++ S ++ K R+ R E+ ++H NIV
Sbjct: 36 SFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN 95
Query: 278 DCHLLVSEFMKNGSLLEILND----VSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+V ++ + G L + +N + Q + L+W + +A L H +I
Sbjct: 96 GSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA---------LKHVHDRKI 146
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSE 393
+HR+I ++ + D ++ DFG+AR++ + +++ + + GT Y++PE + ++
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACI-GTPYYLSPEICENKPYNN 204
Query: 394 KCDIYSFGVLLAVLV 408
K DI++ G +L L
Sbjct: 205 KSDIWALGCVLYELC 219
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 24/182 (13%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
+H NIV LL L+++E+ G LL L S R LE IA +S
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS---RVLETDPAFAIANSTLSTR 164
Query: 323 EYLHMYHR----------PRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVST 371
+ LH + IHR++ +VL+ + A+I DFGLAR +M D S
Sbjct: 165 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND-----SN 219
Query: 372 SIVAGT----VGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSL 426
IV G V ++APE ++ + D++S+G+LL + +G P +++ L
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
Query: 427 VR 428
V+
Sbjct: 280 VK 281
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
LV E++ +G L + L + R L+ + I G+EYL R +HR++
Sbjct: 103 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 156
Query: 342 SVLIDDDMEARIADFGLARLMP-DGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L++ + +IADFGLA+L+P D V + + APE FS + D++SF
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 216
Query: 401 GVLLAVL 407
GV+L L
Sbjct: 217 GVVLYEL 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 27 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 83
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 84 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 140
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 141 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 194
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 195 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 229
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
+H NIV LL L+++E+ G LL L S R LE IA S
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS---RVLETDPAFAIANSTASTR 164
Query: 323 EYLHMYHR----------PRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVST 371
+ LH + IHR++ +VL+ + A+I DFGLAR +M D S
Sbjct: 165 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND-----SN 219
Query: 372 SIVAGT----VGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSL 426
IV G V ++APE ++ + D++S+G+LL + +G P +++ L
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
Query: 427 VR 428
V+
Sbjct: 280 VK 281
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 22 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 78
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 79 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 136 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 189
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHL-L 282
+PE I + +K +++ + V ++ G + H +IV LL + P L L
Sbjct: 35 IPEGESIKIPVC-IKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG--LCPGSSLQL 91
Query: 283 VSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
V++++ GSLL + V Q R L I G+ YL + ++HRN+ +
Sbjct: 92 VTQYLPLGSLL---DHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARN 145
Query: 343 VLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
VL+ + ++ADFG+A L+P Q+ S + ++A E K++ + D++S+GV
Sbjct: 146 VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGV 205
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 28 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 84
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 85 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 195
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 29 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 85
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 86 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 143 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 196
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 231
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 22 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 78
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 79 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 136 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 189
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 224
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 28 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 84
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 85 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 195
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 28 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 84
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
I+ LL ++ P L EF ++E+++ ++E L R++ + L +
Sbjct: 85 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLXQVIQME-LDHERMSYLLYQMLXGIK 140
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
H IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPEVI 197
Query: 387 QTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 21 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 77
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
I+ LL ++ P L EF ++E+++ ++E L R++ + L +
Sbjct: 78 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLXQVIQME-LDHERMSYLLYQMLXGIK 133
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
H IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPEVI 190
Query: 387 QTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 21 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 77
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 78 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 134
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 135 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 188
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 29 NLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 85
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 86 IISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 143 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 196
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 231
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 22/191 (11%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL 296
VK ++ +I+ R R M HRN++ L+ D LV E M+ GS+L +
Sbjct: 43 VKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHI 102
Query: 297 NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDME---ARI 353
+ RR L + + + S L++L H I HR++ P ++L + + +I
Sbjct: 103 HK----RRHFNELEASVVVQDVASALDFL---HNKGIAHRDLKPENILCEHPNQVSPVKI 155
Query: 354 ADFGLA---RLMPDGHAQVSTS---IVAGTVGYIAPEYHQTLK-----FSEKCDIYSFGV 402
DF L +L D + +ST G+ Y+APE + + ++CD++S GV
Sbjct: 156 CDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGV 214
Query: 403 LLAVLVMGKLP 413
+L +L+ G P
Sbjct: 215 ILYILLSGYPP 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + ++ H+NIV
Sbjct: 43 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKLNHQNIV 97
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 158 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 270
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 271 CPGP-------------VYRIMTQCWQHQPEDRPN 292
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L+ I S A G I A G +A+KK+ + + + K R R E++ + H+NI
Sbjct: 27 LKPIGSGAQG-IVCAAFDTVLGINVAVKKLSRPFQNQTHAK-RAYR-ELVLLKCVNHKNI 83
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEYL 325
+ LL ++ P L EF ++E++ N EL+ + ++ G+++L
Sbjct: 84 ISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHL 140
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY 385
H IIHR++ PS++++ D +I DFGLAR + T Y APE
Sbjct: 141 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVV---TRYYRAPEV 194
Query: 386 HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTE 422
+ + E DI+S G ++ LV G + FQ T+
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKGSV----IFQGTD 227
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 29/202 (14%)
Query: 228 NGKMIAIKKV-KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
NGK A+K + KQ +S + R+V G ++NI+ L+ LV E
Sbjct: 37 NGKEYAVKIIEKQAGHSRSRV-FREVETLYQCQG---NKNILELIEFFEDDTRFYLVFEK 92
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
++ GS+L + Q ++ R+ R + + L++LH I HR++ P ++L +
Sbjct: 93 LQGGSILAHI----QKQKHFNEREASRVVRDVAAALDFLHT---KGIAHRDLKPENILCE 145
Query: 347 DDMEA---RIADFGLARLM-------PDGHAQVSTSIVAGTVGYIAPEY-----HQTLKF 391
+ +I DF L M P +++T G+ Y+APE Q +
Sbjct: 146 SPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP--CGSAEYMAPEVVEVFTDQATFY 203
Query: 392 SEKCDIYSFGVLLAVLVMGKLP 413
++CD++S GV+L +++ G P
Sbjct: 204 DKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 133 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 187
Query: 339 TPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S GV++ +L+ G P
Sbjct: 245 DMWSLGVIMYILLCGYPP 262
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + ++ H+NIV
Sbjct: 57 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKLNHQNIV 111
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 172 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 284
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 285 CPGP-------------VYRIMTQCWQHQPEDRPN 306
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR--------- 313
+H+NI+ LL + ++ E+ G+L E L E + H
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 314 ---IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
A + G+EYL + IHR++ +VL+ +D +IADFGLAR +
Sbjct: 137 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVLL + +G P
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 13/181 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIKK+ + + + K R R E++ + H+NI+ LL ++ P L EF
Sbjct: 52 VAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKNIIGLL-NVFTPQKSL--EEFQDVYI 106
Query: 292 LLEILN-DVSQG-RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
++E+++ ++SQ + EL+ + ++ G+++LH IIHR++ PS++++ D
Sbjct: 107 VMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDA 163
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGLAR G + + T V T Y APE + + E DI+S G ++ ++
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 410 G 410
G
Sbjct: 221 G 221
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 57 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKFNHQNIV 111
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 172 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 284
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 285 CPGP-------------VYRIMTQCWQHQPEDRPN 306
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHR--------- 313
+H+NI+ LL + ++ E+ G+L E L E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 314 ---IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
A + G+EYL + IHR++ +VL+ +D +IADFGLAR +
Sbjct: 152 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVLL + +G P
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 47/261 (18%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK +Q S + ++ E+ Q+ H
Sbjct: 26 AIVKKCREKSTGLEYAAKF---------IKK-RQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 266 NIVPLL-AHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEY 324
N++ L + R D +L+ E + G L + L + L + I+ G+ Y
Sbjct: 76 NVITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNY 130
Query: 325 LHMYHRPRIIHRNITPSSV-LIDDDM---EARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
LH +I H ++ P ++ L+D ++ ++ DFGLA + DG V + GT +
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP--------------------SDDFFQH 420
+APE + D++S GV+ +L+ G P ++FF H
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH 244
Query: 421 TEEKSLVRWMRNVMTSENPNR 441
T E + ++R ++ E R
Sbjct: 245 TSELA-KDFIRKLLVKETRKR 264
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 13/181 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIKK+ + + + K R R E++ + H+NI+ LL ++ P L EF
Sbjct: 52 VAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKNIIGLL-NVFTPQKSL--EEFQDVYI 106
Query: 292 LLEILN-DVSQG-RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
++E+++ ++SQ + EL+ + ++ G+++LH IIHR++ PS++++ D
Sbjct: 107 VMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDC 163
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGLAR G + + T V T Y APE + + E DI+S G ++ ++
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 410 G 410
G
Sbjct: 221 G 221
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK +Q S + ++ E+ Q+ H
Sbjct: 26 AIVKKCREKSTGLEYAAKF---------IKK-RQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 266 NIVPLL-AHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEY 324
N++ L + R D +L+ E + G L + L + L + I+ G+ Y
Sbjct: 76 NVITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNY 130
Query: 325 LHMYHRPRIIHRNITPSSV-LIDDDM---EARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
LH +I H ++ P ++ L+D ++ ++ DFGLA + DG V + GT +
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
+APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 227
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 49 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKFNHQNIV 103
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 164 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 276
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 277 CPGP-------------VYRIMTQCWQHQPEDRPN 298
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L ++ S G+++ G +IA+K++++ N N ++ ++ + +
Sbjct: 29 NLGEMGSGTCGQVWKMRF-RKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPY-- 85
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
IV + + E M G+ E L QG L + +A IV L YL
Sbjct: 86 IVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVA--IVKALYYLK 141
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY- 385
H +IHR++ PS++L+D+ + ++ DFG++ + D A+ + AG Y+APE
Sbjct: 142 EKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS---AGCAAYMAPERI 196
Query: 386 ----HQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ + D++S G+ L L G+ P
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 13/181 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIKK+ + + + K R R E++ + H+NI+ LL ++ P L EF
Sbjct: 52 VAIKKLSRPFQNQTHAK-RAYR-ELVLMKVVNHKNIIGLL-NVFTPQKSL--EEFQDVYI 106
Query: 292 LLEILN-DVSQG-RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
++E+++ ++SQ + EL+ + ++ G+++LH IIHR++ PS++++ D
Sbjct: 107 VMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDA 163
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGLAR G + + T V T Y APE + + E DI+S G ++ ++
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 410 G 410
G
Sbjct: 221 G 221
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 139 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 193
Query: 339 TPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 194 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 250
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S GV++ +L+ G P
Sbjct: 251 DMWSLGVIMYILLCGYPP 268
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 271 LAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYH 329
L + + D +L +V E+M G L+ ++++ + W AR A +++ L H
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---W-ARFYTAEVVLA----LDAIH 185
Query: 330 RPRIIHRNITPSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
IHR++ P ++L+D ++ADFG ++ +G + T++ GT YI+PE ++
Sbjct: 186 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--GTPDYISPEVLKS 243
Query: 389 LK----FSEKCDIYSFGVLLAVLVMGKLP 413
+ +CD +S GV L +++G P
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 47/261 (18%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK +Q S + ++ E+ Q+ H
Sbjct: 26 AIVKKCREKSTGLEYAAKF---------IKK-RQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 266 NIVPLL-AHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEY 324
N++ L + R D +L+ E + G L + L + L + I+ G+ Y
Sbjct: 76 NVITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNY 130
Query: 325 LHMYHRPRIIHRNITPSSV-LIDDDM---EARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
LH +I H ++ P ++ L+D ++ ++ DFGLA + DG V + GT +
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP--------------------SDDFFQH 420
+APE + D++S GV+ +L+ G P ++FF H
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH 244
Query: 421 TEEKSLVRWMRNVMTSENPNR 441
T E + ++R ++ E R
Sbjct: 245 TSELA-KDFIRKLLVKETRKR 264
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 25/206 (12%)
Query: 241 DNSLLNIKMRQVRAEIMTAGQIRHRNIVPLL----AHMVRPDCHLLVSEFMKNGSLLEIL 296
D L + ++ + E ++H NIV + + C +LV+E +G+L L
Sbjct: 61 DRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYL 120
Query: 297 N--DVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM-EARI 353
V + + W R I+ GL++LH P IIHR++ ++ I +I
Sbjct: 121 KRFKVXKIKVLRSW------CRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKI 173
Query: 354 ADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
D GLA L A+ V GT + APE ++ K+ E D+Y+FG + P
Sbjct: 174 GDLGLATLKRASFAKA----VIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYP 228
Query: 414 SDDFFQHTEEKSLVRWMRNVMTSENP 439
++E ++ + R V + P
Sbjct: 229 ------YSECQNAAQIYRRVTSGVKP 248
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 42 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKFNHQNIV 96
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 157 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
PE F+ K D +SFGVLL + +G +P
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 69 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKFNHQNIV 123
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 184 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 296
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 297 CPGP-------------VYRIMTQCWQHQPEDRPN 318
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 94 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 148
Query: 339 TPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 149 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 205
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S GV++ +L+ G P
Sbjct: 206 DMWSLGVIMYILLCGYPP 223
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 89 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 143
Query: 339 TPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S GV++ +L+ G P
Sbjct: 201 DMWSLGVIMYILLCGYPP 218
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 59 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKFNHQNIV 113
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 174 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 286
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 287 CPGP-------------VYRIMTQCWQHQPEDRPN 308
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 93 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 147
Query: 339 TPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 148 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 204
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S GV++ +L+ G P
Sbjct: 205 DMWSLGVIMYILLCGYPP 222
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 271 LAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYH 329
L + + D +L +V E+M G L+ ++++ + W AR A +++ L H
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---W-ARFYTAEVVLA----LDAIH 190
Query: 330 RPRIIHRNITPSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
IHR++ P ++L+D ++ADFG ++ +G + T++ GT YI+PE ++
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--GTPDYISPEVLKS 248
Query: 389 LK----FSEKCDIYSFGVLLAVLVMGKLP 413
+ +CD +S GV L +++G P
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 95 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 149
Query: 339 TPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 150 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 206
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S GV++ +L+ G P
Sbjct: 207 DMWSLGVIMYILLCGYPP 224
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 20/178 (11%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQG------RRELEWLARHRIAR 316
+H NIV LL L+++E+ G LL L ++ R LE +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 317 GIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVA 375
+ G+ +L IHR++ +VL+ + A+I DFGLAR +M D S IV
Sbjct: 160 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND-----SNYIVK 211
Query: 376 GT----VGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVR 428
G V ++APE ++ + D++S+G+LL + +G P +++ LV+
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 269
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 57 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM-----EALIISKFNHQNIV 111
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 172 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 284
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 285 CPGP-------------VYRIMTQCWQHQPEDRPN 306
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 83 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKFNHQNIV 137
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 198 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 310
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 311 CPGP-------------VYRIMTQCWQHQPEDRPN 332
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 20/178 (11%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQG------RRELEWLARHRIAR 316
+H NIV LL L+++E+ G LL L ++ R LE +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 317 GIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVA 375
+ G+ +L IHR++ +VL+ + A+I DFGLAR +M D S IV
Sbjct: 168 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND-----SNYIVK 219
Query: 376 GT----VGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVR 428
G V ++APE ++ + D++S+G+LL + +G P +++ LV+
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 277
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 271 LAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYH 329
L + + D +L +V E+M G L+ ++++ + W AR A +++ L H
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---W-ARFYTAEVVLA----LDAIH 190
Query: 330 RPRIIHRNITPSSVLIDDDMEARIADFGLA-RLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
IHR++ P ++L+D ++ADFG ++ +G + T++ GT YI+PE ++
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--GTPDYISPEVLKS 248
Query: 389 LK----FSEKCDIYSFGVLLAVLVMGKLP 413
+ +CD +S GV L +++G P
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 60 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKFNHQNIV 114
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 175 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 287
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 288 CPGP-------------VYRIMTQCWQHQPEDRPN 309
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 53/262 (20%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK +Q S + ++ E+ Q+ H
Sbjct: 26 AIVKKCREKSTGLEYAAKF---------IKK-RQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 266 NIVPLL-AHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEY 324
N++ L + R D +L+ E + G L + L + L + I+ G+ Y
Sbjct: 76 NVITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNY 130
Query: 325 LHMYHRPRIIHRNITPSSV-LIDDDM---EARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
LH +I H ++ P ++ L+D ++ ++ DFGLA + DG V + GT +
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP--------------------SDDFFQH 420
+APE + D++S GV+ +L+ G P ++FF H
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH 244
Query: 421 TEE-------KSLVRWMRNVMT 435
T E K LV+ R +T
Sbjct: 245 TSELAKDFIRKLLVKETRKRLT 266
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 252 VRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLAR 311
VR EI T +RH +V L + +++ EFM G L E + D E E +
Sbjct: 95 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV-- 152
Query: 312 HRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM--EARIADFGL-ARLMPDGHAQ 368
R + GL HM H +H ++ P +++ E ++ DFGL A L P +
Sbjct: 153 -EYMRQVCKGL--CHM-HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 208
Query: 369 VSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
V+T GT + APE + D++S GVL +L+ G P
Sbjct: 209 VTT----GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 89 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 143
Query: 339 TPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S GV++ +L+ G P
Sbjct: 201 DMWSLGVIMYILLCGYPP 218
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 43 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKFNHQNIV 97
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 158 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 270
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 271 CPGP-------------VYRIMTQCWQHQPEDRPN 292
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 19/233 (8%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
+EKI G +Y A + G+++A+KK++ +D + +R EI ++ H NI
Sbjct: 11 VEKIGEGTYGVVYKAR-NKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKELNHPNI 67
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHM 327
V LL + + LV E + L+ D S L + I + L+ L
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQD--LKKFMDASA----LTGIPLPLIKSYLFQLLQGLAF 121
Query: 328 YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQ 387
H R++HR++ P ++LI+ + ++ADFGLAR +V T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 179
Query: 388 TLK-FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEEKSLVRWMRNVMTSE 437
K +S DI+S G + A +V + P D +E L R R + T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPD 227
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 42 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKFNHQNIV 96
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 157 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 269
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 270 CPGP-------------VYRIMTQCWQHQPEDRPN 291
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 88 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 142
Query: 339 TPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 143 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 199
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S GV++ +L+ G P
Sbjct: 200 DMWSLGVIMYILLCGYPP 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 87 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 141
Query: 339 TPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 198
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S GV++ +L+ G P
Sbjct: 199 DMWSLGVIMYILLCGYPP 216
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 34 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKFNHQNIV 88
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+AR + V ++
Sbjct: 149 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 261
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 262 CPGP-------------VYRIMTQCWQHQPEDRPN 283
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 103 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 157
Query: 339 TPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 158 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S GV++ +L+ G P
Sbjct: 215 DMWSLGVIMYILLCGYPP 232
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK +Q S + ++ E+ Q+ H
Sbjct: 26 AIVKKCREKSTGLEYAAKF---------IKK-RQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 266 NIVPLL-AHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEY 324
N++ L + R D +L+ E + G L + L + L + I+ G+ Y
Sbjct: 76 NVITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNY 130
Query: 325 LHMYHRPRIIHRNITPSSV-LIDDDM---EARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
LH +I H ++ P ++ L+D ++ ++ DFGLA + DG V + GT +
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
+APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 227
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 13/181 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIKK+ + + + K R R E++ + H+NI+ LL ++ P L EF
Sbjct: 52 VAIKKLSRPFQNQTHAK-RAYR-ELVLMKVVNHKNIIGLL-NVFTPQKSL--EEFQDVYI 106
Query: 292 LLEILN-DVSQG-RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
++E+++ ++SQ + EL+ + ++ G+++LH IIHR++ PS++++ D
Sbjct: 107 VMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDA 163
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGLAR G + + T V T Y APE + + E DI+S G ++ ++
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 410 G 410
G
Sbjct: 221 G 221
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 252 VRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLAR 311
VR EI T +RH +V L + +++ EFM G L E + D E E +
Sbjct: 201 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV-- 258
Query: 312 HRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDD--DMEARIADFGL-ARLMPDGHAQ 368
R + GL HM H +H ++ P +++ E ++ DFGL A L P +
Sbjct: 259 -EYMRQVCKGL--CHM-HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314
Query: 369 VSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
V+T GT + APE + D++S GVL +L+ G P
Sbjct: 315 VTT----GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAE-IVSAL 123
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL-MPDGHAQVSTSIVAGTVGYI 381
EYLH +++R+I ++++D D +I DFGL + + DG + GT Y+
Sbjct: 124 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYL 177
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
APE + + D + GV++ ++ G+LP F+ E+
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHER 217
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
V E++ G L+ + V + + IA G L II+R++
Sbjct: 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG-------LFFLQSKGIIYRDLKLD 150
Query: 342 SVLIDDDMEARIADFGLARL-MPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
+V++D + +IADFG+ + + DG V+T GT YIAPE + + D ++F
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 207
Query: 401 GVLLAVLVMGKLP-----SDDFFQHTEEKSLV 427
GVLL ++ G+ P D+ FQ E ++
Sbjct: 208 GVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA 239
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAE-IVSAL 118
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL-MPDGHAQVSTSIVAGTVGYI 381
EYLH +++R+I ++++D D +I DFGL + + DG + GT Y+
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYL 172
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
APE + + D + GV++ ++ G+LP F+ E+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHER 212
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 33 NLKPIGSGAQG-IVCAAYDAILERNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 89
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 90 IIGLL-NVFTPQKSL--EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 146
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 147 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 200
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E D++S G ++ +V K+ P D+
Sbjct: 201 VILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY 235
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+M G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYMPGGDMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ADFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 22 NLKPIGSGAQG-IVCAAYDAILERNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 78
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 79 IIGLL-NVFTPQKSL--EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 136 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 189
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E D++S G ++ +V K+ P D+
Sbjct: 190 VILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY 224
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+M G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYMPGGDMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ADFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLA 310
+V+ EI Q+ H N++ L + +LV E++ G L + + D S EL+ +
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL 191
Query: 311 RHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI--DDDMEARIADFGLAR-LMPDGHA 367
+ I G+ ++H + I+H ++ P ++L D + +I DFGLAR P
Sbjct: 192 ---FMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+V+ GT ++APE S D++S GV+ +L+ G P
Sbjct: 246 KVNF----GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ E+ G+L E L N V + + +
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++T +VL+ ++ +IADFGLAR + +
Sbjct: 146 LVSCTYQLARG----MEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAE-IVSAL 118
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIA 382
EYLH +++R+I ++++D D +I DFGL + A + T GT Y+A
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLA 173
Query: 383 PEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
PE + + D + GV++ ++ G+LP F+ E+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHER 212
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+M G L+ ++++ + W A+ A +++ L H +IHR++ P
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPEK---W-AKFYTAEVVLA----LDAIHSMGLIHRDVKPD 203
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK----FSEKCDI 397
++L+D ++ADFG M D V GT YI+PE ++ + +CD
Sbjct: 204 NMLLDKHGHLKLADFGTCMKM-DETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 262
Query: 398 YSFGVLLAVLVMGKLP 413
+S GV L +++G P
Sbjct: 263 WSVGVFLFEMLVGDTP 278
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
V E++ G L+ + V + + IA G L II+R++
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG-------LFFLQSKGIIYRDLKLD 471
Query: 342 SVLIDDDMEARIADFGLARL-MPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
+V++D + +IADFG+ + + DG V+T GT YIAPE + + D ++F
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 528
Query: 401 GVLLAVLVMGKLP-----SDDFFQHTEEKSLV 427
GVLL ++ G+ P D+ FQ E ++
Sbjct: 529 GVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA 560
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 109/223 (48%), Gaps = 21/223 (9%)
Query: 191 IEKEDLAFLEKE-DCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKM 249
+EK+ L +++ +C A +I A G+++ A ++ G+ +A+K+V+ V + +
Sbjct: 1 MEKDGLCRADQQYECVA---EIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPL 56
Query: 250 RQVR--AEIMTAGQIRHRNIVPL-----LAHMVRPDCHLLVSEFMKNGSLLEILNDVSQG 302
+R A + H N+V L ++ R LV E + + L L+ V +
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEP 115
Query: 303 RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM 362
E + ++ GL++LH + R++HR++ P ++L+ + ++ADFGLAR+
Sbjct: 116 GVPTETIKDMMFQ--LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170
Query: 363 PDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
Q++ + V T+ Y APE ++ D++S G + A
Sbjct: 171 ---SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 210
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIKK+ + + + K R R E++ + H+NI+ LL ++ P L EF
Sbjct: 53 VAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKNIIGLL-NVFTPQKSL--EEFQDVYI 107
Query: 292 LLEIL--NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
++E++ N + EL+ + ++ G+++LH IIHR++ PS++++ D
Sbjct: 108 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDC 164
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGLAR G + + T V T Y APE + + E DI+S G ++ ++
Sbjct: 165 TLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 221
Query: 410 G 410
G
Sbjct: 222 G 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 28 NLKPIGSGAQG-IVCAAYDAILERNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 84
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 85 IIGLL-NVFTPQKSL--EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR G + + T V T Y APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPE 195
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMG 410
+ + E DI+S G ++ ++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIKK+ + + + K R R E++ + H+NI+ LL ++ P L EF
Sbjct: 52 VAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKNIIGLL-NVFTPQKSL--EEFQDVYI 106
Query: 292 LLEIL--NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
++E++ N + EL+ + ++ G+++LH IIHR++ PS++++ D
Sbjct: 107 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDC 163
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGLAR G + + T V T Y APE + + E DI+S G ++ ++
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 410 G 410
G
Sbjct: 221 G 221
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 133 CLLIVXECLDGGELFSRIQD--RGDQAFTEREASEIXKSIGEAIQYLHSIN---IAHRDV 187
Query: 339 TPSSVLIDDDMEA---RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 396 DIYSFGVLLAVLVMGKLP 413
D +S GV+ +L+ G P
Sbjct: 245 DXWSLGVIXYILLCGYPP 262
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 109/223 (48%), Gaps = 21/223 (9%)
Query: 191 IEKEDLAFLEKE-DCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKM 249
+EK+ L +++ +C A +I A G+++ A ++ G+ +A+K+V+ V + +
Sbjct: 1 MEKDGLCRADQQYECVA---EIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPL 56
Query: 250 RQVR--AEIMTAGQIRHRNIVPL-----LAHMVRPDCHLLVSEFMKNGSLLEILNDVSQG 302
+R A + H N+V L ++ R LV E + + L L+ V +
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEP 115
Query: 303 RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM 362
E + ++ GL++LH + R++HR++ P ++L+ + ++ADFGLAR+
Sbjct: 116 GVPTETIKDMMFQ--LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170
Query: 363 PDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
Q++ + V T+ Y APE ++ D++S G + A
Sbjct: 171 ---SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 210
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAE-IVSAL 121
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIA 382
EYLH +++R+I ++++D D +I DFGL + A + T GT Y+A
Sbjct: 122 EYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLA 176
Query: 383 PEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
PE + + D + GV++ ++ G+LP F+ E+
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHER 215
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 208 LEKIRSRASGEIYIAEL----PESN--GKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQ 261
L++IR G EL PE + G+ +A+K +K + ++ EI
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG---NHIADLKKEIEILRN 79
Query: 262 IRHRNIVPLLAHMVRPDCH--LLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
+ H NIV + L+ EF+ +GSL E L + + ++ + + A I
Sbjct: 80 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQIC 136
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PDGHAQVSTSIVAGTV 378
G++YL + +HR++ +VL++ + + +I DFGL + + D V
Sbjct: 137 KGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 193
Query: 379 GYIAPEYHQTLKFSEKCDIYSFGVLLAVLV 408
+ APE KF D++SFGV L L+
Sbjct: 194 FWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 313 RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTS 372
+IA IV LE+LH + +IHR++ PS+VLI+ + + DFG++ + D V+
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD---DVAKD 194
Query: 373 IVAGTVGYIAPE-YHQTLK---FSEKCDIYSFGVLLAVLVMGKLPSDDF 417
I AG Y APE + L +S K DI+S G+ L + + P D +
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSW 243
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 219 IYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPD 278
IY++ PE+ +AIK K + + K Q E +T Q H +IV L+ ++ +
Sbjct: 410 IYMS--PENPAMAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITEN 463
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
++ E G L L V + +L L + A + + L YL R +HR+I
Sbjct: 464 PVWIIMELCTLGELRSFLQ-VRKFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDI 517
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ + ++ DFGL+R M D S + ++APE +F+ D++
Sbjct: 518 AARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVW 576
Query: 399 SFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQML 457
FGV + +L+ G P FQ + ++ + N P + L
Sbjct: 577 MFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT-----------L 621
Query: 458 LVLKIACFCTLDDPEERPNSKDVRSMLS 485
L C+ DP RP ++++ LS
Sbjct: 622 YSLMTKCWAY--DPSRRPRFTELKAQLS 647
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 208 LEKIRSRASGEIYIAEL----PESN--GKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQ 261
L++IR G EL PE + G+ +A+K +K + ++ EI
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG---NHIADLKKEIEILRN 67
Query: 262 IRHRNIVPLLAHMVRPDCH--LLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV 319
+ H NIV + L+ EF+ +GSL E L + + ++ + + A I
Sbjct: 68 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQIC 124
Query: 320 SGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PDGHAQVSTSIVAGTV 378
G++YL + +HR++ +VL++ + + +I DFGL + + D V
Sbjct: 125 KGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 181
Query: 379 GYIAPEYHQTLKFSEKCDIYSFGVLLAVLV 408
+ APE KF D++SFGV L L+
Sbjct: 182 FWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAE-IVSAL 118
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIA 382
EYLH +++R+I ++++D D +I DFGL + A + T GT Y+A
Sbjct: 119 EYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLA 173
Query: 383 PEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
PE + + D + GV++ ++ G+LP F+ E+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHER 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 109/223 (48%), Gaps = 21/223 (9%)
Query: 191 IEKEDLAFLEKE-DCSASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKM 249
+EK+ L +++ +C A +I A G+++ A ++ G+ +A+K+V+ V + +
Sbjct: 1 MEKDGLCRADQQYECVA---EIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPL 56
Query: 250 RQVR--AEIMTAGQIRHRNIVPL-----LAHMVRPDCHLLVSEFMKNGSLLEILNDVSQG 302
+R A + H N+V L ++ R LV E + + L L+ V +
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEP 115
Query: 303 RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM 362
E + ++ GL++LH + R++HR++ P ++L+ + ++ADFGLAR+
Sbjct: 116 GVPTETIKDMMFQ--LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170
Query: 363 PDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
Q++ + V T+ Y APE ++ D++S G + A
Sbjct: 171 ---SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 210
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAE-IVSAL 118
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL-MPDGHAQVSTSIVAGTVGYI 381
EYLH +++R+I ++++D D +I DFGL + + DG + GT Y+
Sbjct: 119 EYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYL 172
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
APE + + D + GV++ ++ G+LP F+ E+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHER 212
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK +Q S + ++ E+ Q+ H
Sbjct: 26 AIVKKCREKSTGLEYAAKF---------IKK-RQSRASRRGVCREEIEREVSILRQVLHP 75
Query: 266 NIVPLL-AHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEY 324
NI+ L + R D +L+ E + G L + L + L + I+ G+ Y
Sbjct: 76 NIITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNY 130
Query: 325 LHMYHRPRIIHRNITPSSV-LIDDDM---EARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
LH +I H ++ P ++ L+D ++ ++ DFGLA + DG V + GT +
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
+APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 227
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAE-IVSAL 118
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL-MPDGHAQVSTSIVAGTVGYI 381
EYLH +++R+I ++++D D +I DFGL + + DG + GT Y+
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYL 172
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
APE + + D + GV++ ++ G+LP F+ E+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHER 212
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
C L+V E + G L + D +G + I + I ++YLH + I HR++
Sbjct: 87 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 141
Query: 339 TPSSVLIDD---DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKC 395
P ++L + ++ DFG A+ + + S + T Y+APE K+ + C
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 396 DIYSFGVLLAVLVMGKLP 413
D++S GV++ +L+ G P
Sbjct: 199 DMWSLGVIMYILLCGYPP 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAE-IVSAL 264
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL-MPDGHAQVSTSIVAGTVGYI 381
+YLH +++R++ ++++D D +I DFGL + + DG + GT Y+
Sbjct: 265 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKTFCGTPEYL 319
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
APE + + D + GV++ ++ G+LP F+ EK
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEK 359
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAE-IVSAL 261
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL-MPDGHAQVSTSIVAGTVGYI 381
+YLH +++R++ ++++D D +I DFGL + + DG + GT Y+
Sbjct: 262 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKTFCGTPEYL 316
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
APE + + D + GV++ ++ G+LP F+ EK
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEK 356
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ E+ G+L E L N V + + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ RIADFGLAR + +
Sbjct: 159 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L+ I S A G I A G +A+KK+ + + + K R R E++ + H+NI
Sbjct: 29 LKPIGSGAQG-IVCAAFDTVLGINVAVKKLSRPFQNQTHAK-RAYR-ELVLLKCVNHKNI 85
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEYL 325
+ LL ++ P L EF ++E++ N EL+ + ++ G+++L
Sbjct: 86 ISLL-NVFTPQKTL--EEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHL 142
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY 385
H IIHR++ PS++++ D +I DFGLAR + T Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV---TRYYRAPEV 196
Query: 386 HQTLKFSEKCDIYSFGVLLAVLVMG 410
+ ++ DI+S G ++ LV G
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 219 IYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPD 278
IY++ PE+ +AIK K + + K Q E +T Q H +IV L+ ++ +
Sbjct: 30 IYMS--PENPAMAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITEN 83
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
++ E G L L V + +L L + A + + L YL R +HR+I
Sbjct: 84 PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILY--AYQLSTALAYLE---SKRFVHRDI 137
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ + ++ DFGL+R M D S + ++APE +F+ D++
Sbjct: 138 AARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVW 196
Query: 399 SFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQML 457
FGV + +L+ G P FQ + ++ + N P + L
Sbjct: 197 MFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT-----------L 241
Query: 458 LVLKIACFCTLDDPEERPNSKDVRSMLS 485
L C+ DP RP ++++ LS
Sbjct: 242 YSLMTKCWAY--DPSRRPRFTELKAQLS 267
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIKK+ + + + K R R E++ + H+NI+ LL ++ P L EF
Sbjct: 54 VAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKNIIGLL-NVFTPQKSL--EEFQDVYI 108
Query: 292 LLEIL--NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
++E++ N + EL+ + ++ G+++LH IIHR++ PS++++ D
Sbjct: 109 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDC 165
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGLAR V + T Y APE + + E DI+S G ++ ++
Sbjct: 166 TLKILDFGLARTAGTSFMMVPFVV---TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 222
Query: 410 G 410
G
Sbjct: 223 G 223
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 215 ASGEIY---IAELPESNGKM-IAIKKVKQV--DNSLLNIKMRQVRAEIMTAGQIRHRNIV 268
A GE+Y ++ +P + +A+K + +V + L+ M E + + H+NIV
Sbjct: 43 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-----EALIISKFNHQNIV 97
Query: 269 PLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---RIARGIVSGLEYL 325
+ ++ ++ E M G L L + + LA +AR I G +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIA---DFGLARLMPDGHAQVSTSIVAGTVGYIA 382
H IHR+I + L+ R+A DFG+A+ + V ++
Sbjct: 158 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 383 PEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
PE F+ K D +SFGVLL + +G +P + + ++ ++ + + P
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKN 270
Query: 442 AIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPN 476
V +I C PE+RPN
Sbjct: 271 CPGP-------------VYRIMTQCWQHQPEDRPN 292
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 219 IYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPD 278
IY++ PE+ +AIK K + + K Q E +T Q H +IV L+ ++ +
Sbjct: 30 IYMS--PENPAMAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITEN 83
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
++ E G L L V + +L L + A + + L YL R +HR+I
Sbjct: 84 PVWIIMELCTLGELRSFLQ-VRKFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDI 137
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ + ++ DFGL+R M D S + ++APE +F+ D++
Sbjct: 138 AARNVLVSSNDCVKLGDFGLSRYMEDS-TXXKASKGKLPIKWMAPESINFRRFTSASDVW 196
Query: 399 SFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQML 457
FGV + +L+ G P FQ + ++ + N P + L
Sbjct: 197 MFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT-----------L 241
Query: 458 LVLKIACFCTLDDPEERPNSKDVRSMLS 485
L C+ DP RP ++++ LS
Sbjct: 242 YSLMTKCWAY--DPSRRPRFTELKAQLS 267
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 219 IYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPD 278
IY++ PE+ +AIK K + + K Q E +T Q H +IV L+ ++ +
Sbjct: 27 IYMS--PENPALAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITEN 80
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
++ E G L L V + +L L + A + + L YL R +HR+I
Sbjct: 81 PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILY--AYQLSTALAYLE---SKRFVHRDI 134
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ + ++ DFGL+R M D S + ++APE +F+ D++
Sbjct: 135 AARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVW 193
Query: 399 SFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQML 457
FGV + +L+ G P FQ + ++ + N P + L
Sbjct: 194 MFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT-----------L 238
Query: 458 LVLKIACFCTLDDPEERPNSKDVRSMLS 485
L C+ DP RP ++++ LS
Sbjct: 239 YSLMTKCWAY--DPSRRPRFTELKAQLS 264
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIKK+ + + + K R R E++ + H+NI+ LL ++ P L EF
Sbjct: 52 VAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKNIIGLL-NVFTPQKSL--EEFQDVYI 106
Query: 292 LLEIL--NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
++E++ N + EL+ + ++ G+++LH IIHR++ PS++++ D
Sbjct: 107 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDC 163
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGLAR G + + T V T Y APE + + E DI+S G ++ ++
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPEVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 410 G 410
G
Sbjct: 221 G 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAE-IVSAL 121
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL-MPDGHAQVSTSIVAGTVGYI 381
+YLH +++R++ ++++D D +I DFGL + + DG + GT Y+
Sbjct: 122 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYL 176
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
APE + + D + GV++ ++ G+LP F+ EK
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEK 216
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 219 IYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPD 278
IY++ PE+ +AIK K + + K Q E +T Q H +IV L+ ++ +
Sbjct: 33 IYMS--PENPALAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITEN 86
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
++ E G L L V + +L L + A + + L YL R +HR+I
Sbjct: 87 PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILY--AYQLSTALAYLE---SKRFVHRDI 140
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ + ++ DFGL+R M D S + ++APE +F+ D++
Sbjct: 141 AARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVW 199
Query: 399 SFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQML 457
FGV + +L+ G P FQ + ++ + N P + L
Sbjct: 200 MFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT-----------L 244
Query: 458 LVLKIACFCTLDDPEERPNSKDVRSMLS 485
L C+ DP RP ++++ LS
Sbjct: 245 YSLMTKCWAY--DPSRRPRFTELKAQLS 270
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 219 IYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPD 278
IY++ PE+ +AIK K + + K Q E +T Q H +IV L+ ++ +
Sbjct: 32 IYMS--PENPALAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITEN 85
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
++ E G L L V + +L L + A + + L YL R +HR+I
Sbjct: 86 PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILY--AYQLSTALAYLE---SKRFVHRDI 139
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ + ++ DFGL+R M D S + ++APE +F+ D++
Sbjct: 140 AARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVW 198
Query: 399 SFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQML 457
FGV + +L+ G P FQ + ++ + N P + L
Sbjct: 199 MFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT-----------L 243
Query: 458 LVLKIACFCTLDDPEERPNSKDVRSMLS 485
L C+ DP RP ++++ LS
Sbjct: 244 YSLMTKCWAY--DPSRRPRFTELKAQLS 269
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAE-IVSAL 122
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL-MPDGHAQVSTSIVAGTVGYI 381
+YLH +++R++ ++++D D +I DFGL + + DG + GT Y+
Sbjct: 123 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYL 177
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
APE + + D + GV++ ++ G+LP F+ EK
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEK 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 219 IYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPD 278
IY++ PE+ +AIK K + + K Q E +T Q H +IV L+ ++ +
Sbjct: 30 IYMS--PENPALAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITEN 83
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
++ E G L L V + +L L + A + + L YL R +HR+I
Sbjct: 84 PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILY--AYQLSTALAYLE---SKRFVHRDI 137
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ + ++ DFGL+R M D S + ++APE +F+ D++
Sbjct: 138 AARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVW 196
Query: 399 SFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQML 457
FGV + +L+ G P FQ + ++ + N P + L
Sbjct: 197 MFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT-----------L 241
Query: 458 LVLKIACFCTLDDPEERPNSKDVRSMLS 485
L C+ DP RP ++++ LS
Sbjct: 242 YSLMTKCWAY--DPSRRPRFTELKAQLS 267
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGL 322
RH + L D V E+ G E+ +S+ R E AR A IVS L
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAE-IVSAL 123
Query: 323 EYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARL-MPDGHAQVSTSIVAGTVGYI 381
+YLH +++R++ ++++D D +I DFGL + + DG + GT Y+
Sbjct: 124 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYL 178
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
APE + + D + GV++ ++ G+LP F+ EK
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEK 218
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ E+ G+L E L N V + + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ +IADFGLAR + +
Sbjct: 159 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ E+ G+L E L N V + + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ +IADFGLAR + +
Sbjct: 159 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
+T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ E+ G+L E L N V + + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ +IADFGLAR + +
Sbjct: 159 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 16/140 (11%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
LV E+ G LL +L+ G R +AR +A +++ + HR +HR+I P
Sbjct: 138 LVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMA----IDSVHRLGYVHRDIKPD 191
Query: 342 SVLIDDDMEARIADFG-LARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL-------KFSE 393
++L+D R+ADFG +L DG V + + GT Y++PE Q + +
Sbjct: 192 NILLDRCGHIRLADFGSCLKLRADG--TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGP 249
Query: 394 KCDIYSFGVLLAVLVMGKLP 413
+CD ++ GV + G+ P
Sbjct: 250 ECDWWALGVFAYEMFYGQTP 269
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ E+ G+L E L N V + + +
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ +IADFGLAR + +
Sbjct: 159 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 42/239 (17%)
Query: 193 KEDLAFLEKEDCSAS-------LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
KED FL+K + A E+IR+ +G S G+++ +K + ++ +
Sbjct: 24 KED--FLKKWESPAQNTAHLDQFERIRTLGTG---------SFGRVMLVKHKETGNHYAM 72
Query: 246 NI-------KMRQVRAEIMTAGQIRHRNIVPLLAHM---VRPDCHL-LVSEFMKNGSLLE 294
I K++Q+ + +I+ P L + + + +L +V E+ G +
Sbjct: 73 KILDKQKVVKLKQIE-HTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS 131
Query: 295 ILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIA 354
L + R E AR A+ IV EYLH +I+R++ P ++LID ++A
Sbjct: 132 HLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVA 184
Query: 355 DFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
DFG A+ + T + GT Y+APE + +++ D ++ GVL+ + G P
Sbjct: 185 DFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 13/190 (6%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
SN IAIK++ + D+ + + EI ++H+NIV L + E
Sbjct: 45 SNQVRIAIKEIPERDSRY----SQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
+ GSL +L ++ E + I+ GL+YLH +I+HR+I +VLI+
Sbjct: 101 VPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEGLKYLH---DNQIVHRDIKGDNVLIN 156
Query: 347 DDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY--HQTLKFSEKCDIYSFGVL 403
+I+DFG ++ + T GT+ Y+APE + + DI+S G
Sbjct: 157 TYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCT 214
Query: 404 LAVLVMGKLP 413
+ + GK P
Sbjct: 215 IIEMATGKPP 224
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ADFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 219 IYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPD 278
IY++ PE+ +AIK K + + K Q E +T Q H +IV L+ ++ +
Sbjct: 35 IYMS--PENPALAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITEN 88
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
++ E G L L V + +L L + A + + L YL R +HR+I
Sbjct: 89 PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILY--AYQLSTALAYLE---SKRFVHRDI 142
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ + ++ DFGL+R M D S + ++APE +F+ D++
Sbjct: 143 AARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVW 201
Query: 399 SFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQML 457
FGV + +L+ G P FQ + ++ + N P + L
Sbjct: 202 MFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT-----------L 246
Query: 458 LVLKIACFCTLDDPEERPNSKDVRSMLS 485
L C+ DP RP ++++ LS
Sbjct: 247 YSLMTKCWAY--DPSRRPRFTELKAQLS 272
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 219 IYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPD 278
IY++ PE+ +AIK K + + K Q E +T Q H +IV L+ ++ +
Sbjct: 58 IYMS--PENPALAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITEN 111
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
++ E G L L V + +L L + A + + L YL R +HR+I
Sbjct: 112 PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILY--AYQLSTALAYLE---SKRFVHRDI 165
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ + ++ DFGL+R M D S + ++APE +F+ D++
Sbjct: 166 AARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVW 224
Query: 399 SFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQML 457
FGV + +L+ G P FQ + ++ + N P + L
Sbjct: 225 MFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT-----------L 269
Query: 458 LVLKIACFCTLDDPEERPNSKDVRSMLS 485
L C+ DP RP ++++ LS
Sbjct: 270 YSLMTKCWAY--DPSRRPRFTELKAQLS 295
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 31/268 (11%)
Query: 219 IYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPD 278
IY++ PE+ +AIK K + + K Q E +T Q H +IV L+ ++ +
Sbjct: 410 IYMS--PENPAMAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITEN 463
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
++ E G L L V + +L L + A + + L YL R +HR+I
Sbjct: 464 PVWIIMELCTLGELRSFLQ-VRKFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDI 517
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ ++ DFGL+R M D S + ++APE +F+ D++
Sbjct: 518 AARNVLVSATDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVW 576
Query: 399 SFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQML 457
FGV + +L+ G P FQ + ++ + N P + L
Sbjct: 577 MFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT-----------L 621
Query: 458 LVLKIACFCTLDDPEERPNSKDVRSMLS 485
L C+ DP RP ++++ LS
Sbjct: 622 YSLMTKCWAY--DPSRRPRFTELKAQLS 647
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ E+ G+L E L N V + + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ +IADFGLAR + +
Sbjct: 159 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ E+ G+L E L N V + + +
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ +IADFGLAR + +
Sbjct: 151 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T +AGT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ E+ G+L E L N V + + +
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ +IADFGLAR + +
Sbjct: 148 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 207 SLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRN 266
+L+ I S A G I A + +AIKK+ + + + K R R E++ + H+N
Sbjct: 28 NLKPIGSGAQG-IVCAAYDAILERNVAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKN 84
Query: 267 IVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEY 324
I+ LL ++ P L EF ++E++ N + EL+ + ++ G+++
Sbjct: 85 IIGLL-NVFTPQKSL--EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH IIHR++ PS++++ D +I DFGLAR + T Y APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV---TRYYRAPE 195
Query: 385 YHQTLKFSEKCDIYSFGVLLAVLVMGKL--PSDDF 417
+ + E DI+S G ++ +V K+ P D+
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDY 230
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ E+ G+L E L N V + + +
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ +IADFGLAR + +
Sbjct: 159 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPAFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 13/190 (6%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEF 286
SN IAIK++ + D+ + + EI ++H+NIV L + E
Sbjct: 31 SNQVRIAIKEIPERDSRY----SQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 86
Query: 287 MKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLID 346
+ GSL +L ++ E + I+ GL+YLH +I+HR+I +VLI+
Sbjct: 87 VPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEGLKYLH---DNQIVHRDIKGDNVLIN 142
Query: 347 DDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY--HQTLKFSEKCDIYSFGVL 403
+I+DFG ++ + T GT+ Y+APE + + DI+S G
Sbjct: 143 TYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCT 200
Query: 404 LAVLVMGKLP 413
+ + GK P
Sbjct: 201 IIEMATGKPP 210
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 27/195 (13%)
Query: 226 ESNGKMIAIKKVKQV--DNSLLNIK-----MRQVRAEIMTAGQIRHRNIVPL---LAHMV 275
+S G +AIK+V D +NI ++V EI H NI+ L H
Sbjct: 43 DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE 102
Query: 276 RPDCH--LLVSEFMKNGSLLEILND--VSQGRRELEWLARHRIARGIVSGLEYLHMYHRP 331
P H LV+E M+ L ++++D + + +++ H I+ GL H+ H
Sbjct: 103 EPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYH-----ILLGL---HVLHEA 153
Query: 332 RIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK- 390
++HR++ P ++L+ D+ + I DF LAR + A + + Y APE K
Sbjct: 154 GVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPELVMQFKG 210
Query: 391 FSEKCDIYSFGVLLA 405
F++ D++S G ++A
Sbjct: 211 FTKLVDMWSAGCVMA 225
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 26/184 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH---------- 312
+H NIV LL L+++E+ G LL L E + H
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 313 --RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQV 369
+ + G+ +L IHR++ +VL+ + A+I DFGLAR +M D
Sbjct: 168 LLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND----- 219
Query: 370 STSIVAGT----VGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEK 424
S IV G V ++APE ++ + D++S+G+LL + +G P +++
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 279
Query: 425 SLVR 428
LV+
Sbjct: 280 KLVK 283
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 27/195 (13%)
Query: 226 ESNGKMIAIKKVKQV--DNSLLNIK-----MRQVRAEIMTAGQIRHRNIVPL---LAHMV 275
+S G +AIK+V D +NI ++V EI H NI+ L H
Sbjct: 43 DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE 102
Query: 276 RPDCH--LLVSEFMKNGSLLEILND--VSQGRRELEWLARHRIARGIVSGLEYLHMYHRP 331
P H LV+E M+ L ++++D + + +++ H I+ GL H+ H
Sbjct: 103 EPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYH-----ILLGL---HVLHEA 153
Query: 332 RIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK- 390
++HR++ P ++L+ D+ + I DF LAR + A + + Y APE K
Sbjct: 154 GVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPELVMQFKG 210
Query: 391 FSEKCDIYSFGVLLA 405
F++ D++S G ++A
Sbjct: 211 FTKLVDMWSAGCVMA 225
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ E+ G+L E L N V + + +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ +IADFGLAR + +
Sbjct: 205 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 139 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 191
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + +T + GT Y+APE + +++ D ++ G
Sbjct: 192 NLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 247 VLIYEMAAGYPP 258
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 31/268 (11%)
Query: 219 IYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPD 278
IY++ PE+ +AIK K + + K Q E +T Q H +IV L+ ++ +
Sbjct: 30 IYMS--PENPAMAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITEN 83
Query: 279 CHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
++ E G L L V + +L L + A + + L YL R +HR+I
Sbjct: 84 PVWIIMELCTLGELRSFLQ-VRKFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDI 137
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ ++ DFGL+R M D S + ++APE +F+ D++
Sbjct: 138 AARNVLVSATDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVW 196
Query: 399 SFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQML 457
FGV + +L+ G P FQ + ++ + N P + L
Sbjct: 197 MFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT-----------L 241
Query: 458 LVLKIACFCTLDDPEERPNSKDVRSMLS 485
L C+ DP RP ++++ LS
Sbjct: 242 YSLMTKCWAY--DPSRRPRFTELKAQLS 267
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLV 427
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETLA 227
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PDGHAQVSTSIVAGTVGY 380
LE +H H+ I+H ++ P++ LI D M ++ DFG+A M PD + V S V GTV Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 222
Query: 381 IAPEYHQTLKFSEK-----------CDIYSFGVLLAVLVMGKLP 413
+ PE + + S + D++S G +L + GK P
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PDGHAQVSTSIVAGTVGY 380
LE +H H+ I+H ++ P++ LI D M ++ DFG+A M PD + V S V GTV Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 222
Query: 381 IAPEYHQTLKFSEK-----------CDIYSFGVLLAVLVMGKLP 413
+ PE + + S + D++S G +L + GK P
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 40/238 (16%)
Query: 193 KEDLAFLEKEDCSAS-------LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
KED FL+K + A E+I++ +G S G+++ +K ++ ++ +
Sbjct: 23 KED--FLKKWENPAQNTAHLDQFERIKTLGTG---------SFGRVMLVKHMETGNHYAM 71
Query: 246 NIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR- 303
I +Q +++ QI H N +L + P L F N +L ++ V+ G
Sbjct: 72 KILDKQ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 304 --------RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
R E AR A+ IV EYLH +I+R++ P ++LID ++ D
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTD 184
Query: 356 FGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
FG A+ + T + GT Y+APE + +++ D ++ GVL+ + G P
Sbjct: 185 FGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 24 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 129
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 130 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFV 183
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 188 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 194 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 141 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 198 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 190 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 193 KEDLAFLEKEDCSAS-------LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
KED FL+K + A E+I++ +G S G+++ +K ++ ++ +
Sbjct: 23 KED--FLKKWENPAQNTAHLDQFERIKTLGTG---------SFGRVMLVKHMETGNHYAM 71
Query: 246 NIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR- 303
I +Q +++ QI H N +L + P L F N +L ++ V G
Sbjct: 72 KILDKQ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 304 --------RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
R E AR A+ IV EYLH +I+R++ P ++LID ++ D
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTD 184
Query: 356 FGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
FG A+ + T + GT Y+APE + +++ D ++ GVL+ + G P
Sbjct: 185 FGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 194 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 195 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 139 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 196 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 130 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 187 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 194 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 188 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 113 MVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 165
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 166 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 220
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 221 VLIYEMAAGYPP 232
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 194 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 194 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 192 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PDGHAQVSTSIVAGTVGY 380
LE +H H+ I+H ++ P++ LI D M ++ DFG+A M PD + V S V GTV Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 175
Query: 381 IAPEYHQTLKFSEK-----------CDIYSFGVLLAVLVMGKLP 413
+ PE + + S + D++S G +L + GK P
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 28/171 (16%)
Query: 254 AEIMTAGQIRHRNIVPLLAH-MVRPDCH---LLVSEFMKNGSLLEILNDVSQGRRELEWL 309
EI +RH NI+ +A M + L++ + ++GSL + L R+ LE
Sbjct: 51 TEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPH 105
Query: 310 ARHRIARGIVSGLEYLHM-----YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD 364
R+A GL +LH+ +P I HR+ +VL+ +++ IAD GLA +
Sbjct: 106 LALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ 165
Query: 365 G--HAQVSTSIVAGTVGYIAPEY---------HQTLKFSEKCDIYSFGVLL 404
G + + + GT Y+APE ++ K++ DI++FG++L
Sbjct: 166 GSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWT---DIWAFGLVL 213
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 192 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 193 KEDLAFLEKEDCSAS-------LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
KED FL+K + A E+I++ +G S G+++ +K ++ ++ +
Sbjct: 24 KED--FLKKWENPAQNTAHLDQFERIKTLGTG---------SFGRVMLVKHMETGNHYAM 72
Query: 246 NIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR- 303
I +Q +++ QI H N +L + P L F N +L ++ V G
Sbjct: 73 KILDKQ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 304 --------RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
R E AR A+ IV EYLH +I+R++ P ++LID ++ D
Sbjct: 130 FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTD 185
Query: 356 FGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
FG A+ + T + GT Y+APE + +++ D ++ GVL+ + G P
Sbjct: 186 FGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 190 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 190 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 24 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 129
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 130 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFV 183
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 190 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 193 KEDLAFLEKEDCSAS-------LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
KED FL+K + A E+I++ +G S G+++ +K ++ ++ +
Sbjct: 23 KED--FLKKWENPAQNTAHLDQFERIKTLGTG---------SFGRVMLVKHMETGNHYAM 71
Query: 246 NIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR- 303
I +Q +++ QI H N +L + P L F N +L ++ V G
Sbjct: 72 KILDKQ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 304 --------RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
R E AR A+ IV EYLH +I+R++ P ++LID ++ D
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTD 184
Query: 356 FGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
FG A+ + T + GT Y+APE + +++ D ++ GVL+ + G P
Sbjct: 185 FGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 228 NGKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
G+++AIKK + D + I +R++R Q++H N+V LL R LV E
Sbjct: 27 TGQIVAIKKFLESEDDPVIKKIALREIR----MLKQLKHPNLVNLLEVFRRKRRLHLVFE 82
Query: 286 FMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ + L E L+ +G + H + L+ ++ H+ IHR++ P ++LI
Sbjct: 83 YCDHTVLHE-LDRYQRG------VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI 135
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH-QTLKFSEKCDIYSFGVLL 404
++ DFG ARL+ G + VA T Y +PE ++ D+++ G +
Sbjct: 136 TKHSVIKLCDFGFARLL-TGPSDYYDDEVA-TRWYRSPELLVGDTQYGPPVDVWAIGCVF 193
Query: 405 AVLVMG 410
A L+ G
Sbjct: 194 AELLSG 199
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 224 LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLL--AHMVRPDCHL 281
LP M+A+K +K+ ++ + ++ E + + NIV LL + +P C
Sbjct: 72 LPYEPFTMVAVKMLKEEASADMQADFQR---EAALMAEFDNPNIVKLLGVCAVGKPMC-- 126
Query: 282 LVSEFMKNGSLLEILNDVSQ--------------------GRRELEWLARHRIARGIVSG 321
L+ E+M G L E L +S G L + IAR + +G
Sbjct: 127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAG 186
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
+ YL + +HR++ + L+ ++M +IADFGL+R + + A + ++
Sbjct: 187 MAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWM 243
Query: 382 APEYHQTLKFSEKCDIYSFGVLL 404
PE +++ + D++++GV+L
Sbjct: 244 PPESIFYNRYTTESDVWAYGVVL 266
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFAEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 105 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 157
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID+ ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 158 NLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 212
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 213 VLIYEMAAGYPP 224
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 210 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 238 KQVDNSLLNIKMRQVRA---EIMTAGQIRHRNIVPLLAHMV---RPDCHLLVSEFMKNGS 291
KQ+D ++ +K +A E+M QI H+ P + ++ + + +LV E G
Sbjct: 362 KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGP 421
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
L + L R E+ + + G++YL +HRN+ +VL+ + A
Sbjct: 422 LHKFLVG---KREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYA 475
Query: 352 RIADFGLAR-LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVM 409
+I+DFGL++ L D + S + + APE KFS + D++S+GV + L
Sbjct: 476 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY 535
Query: 410 GKLP 413
G+ P
Sbjct: 536 GQKP 539
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PDGHAQVSTSIVAGTVGY 380
LE +H H+ I+H ++ P++ LI D M ++ DFG+A M PD + V S V GTV Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 194
Query: 381 IAPEYHQTLKFSEK-----------CDIYSFGVLLAVLVMGKLP 413
+ PE + + S + D++S G +L + GK P
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 139 MVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 191
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 192 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 247 VLIYEMAAGYPP 258
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 190 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PDGHAQVSTSIVAGTVGY 380
LE +H H+ I+H ++ P++ LI D M ++ DFG+A M PD + V S V GTV Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 178
Query: 381 IAPEYHQTLKFSEK-----------CDIYSFGVLLAVLVMGKLP 413
+ PE + + S + D++S G +L + GK P
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIKK+ + + + K R R E++ + H+NI+ LL ++ P L EF
Sbjct: 52 VAIKKLSRPFQNQTHAK-RAYR-ELVLMKCVNHKNIIGLL-NVFTPQKSL--EEFQDVYI 106
Query: 292 LLEIL--NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
++E++ N + EL+ + ++ G+++LH IIHR++ PS++++ D
Sbjct: 107 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDC 163
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
+I DFGLAR + T Y APE + + E D++S G ++ +V
Sbjct: 164 TLKILDFGLARTAGTSFMMEPEVV---TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 220
Query: 410 GKL--PSDDF 417
K+ P D+
Sbjct: 221 HKILFPGRDY 230
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 210 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 111 MVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 163
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 164 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 218
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 219 VLIYEMAAGYPP 230
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS--TSIVA 375
I+ GL+Y+H ++HR++ PS++LI+ + +I DFGLAR+ H T VA
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 210 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYQMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 193 KEDLAFLEKEDCSAS-------LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
KED FL+K + A E+I++ +G S G+++ +K ++ ++ +
Sbjct: 24 KED--FLKKWENPAQNTAHLDQFERIKTLGTG---------SFGRVMLVKHMETGNHYAM 72
Query: 246 NIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR- 303
I +Q +++ QI H N +L + P L F N +L ++ V G
Sbjct: 73 KILDKQ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 304 --------RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
R E AR A+ IV EYLH +I+R++ P ++LID ++ D
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTD 185
Query: 356 FGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
FG A+ + T + GT Y+APE + +++ D ++ GVL+ + G P
Sbjct: 186 FGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H T VA
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 192 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 238 KQVDNSLLNIKMRQVRA---EIMTAGQIRHRNIVPLLAHMV---RPDCHLLVSEFMKNGS 291
KQ+D ++ +K +A E+M QI H+ P + ++ + + +LV E G
Sbjct: 36 KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGP 95
Query: 292 LLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEA 351
L + L R E+ + + G++YL +HR++ +VL+ + A
Sbjct: 96 LHKFL---VGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYA 149
Query: 352 RIADFGLAR-LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVLVM 409
+I+DFGL++ L D + S + + APE KFS + D++S+GV + L
Sbjct: 150 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY 209
Query: 410 GKLP 413
G+ P
Sbjct: 210 GQKP 213
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 193 KEDLAFLEKEDCSAS-------LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
KED FL+K + A E+I++ +G S G+++ +K ++ ++ +
Sbjct: 9 KED--FLKKWENPAQNTAHLDQFERIKTLGTG---------SFGRVMLVKHMETGNHYAM 57
Query: 246 NIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR- 303
I +Q +++ QI H N +L + P L F N +L ++ V G
Sbjct: 58 KILDKQ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 114
Query: 304 --------RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
R E AR A+ IV EYLH +I+R++ P ++LID ++ D
Sbjct: 115 FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTD 170
Query: 356 FGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
FG A+ + T + GT Y+APE + +++ D ++ GVL+ + G P
Sbjct: 171 FGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PDGHAQVSTSIVAGTVGY 380
LE +H H+ I+H ++ P++ LI D M ++ DFG+A M PD + V S V GTV Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 174
Query: 381 IAPEYHQTLKFSEK-----------CDIYSFGVLLAVLVMGKLP 413
+ PE + + S + D++S G +L + GK P
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCH----LLVSEFMKNGSLLEILNDVSQGRRELEWL 309
E+ +RH NI+ +A + L++ + + GSL + L + L+ +
Sbjct: 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTV 105
Query: 310 ARHRIARGIVSGLEYLHM-----YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD 364
+ RI I SGL +LH+ +P I HR++ ++L+ + + IAD GLA +
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 365 GHAQ--VSTSIVAGTVGYIAPEY-HQTLKFS-----EKCDIYSFGVLL 404
Q V + GT Y+APE +T++ ++ DI++FG++L
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 22/168 (13%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMV---RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWL 309
E+ +RH NI+ +A + L L++ + + GSL + L + L+ +
Sbjct: 80 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTV 134
Query: 310 ARHRIARGIVSGLEYLHM-----YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD 364
+ RI I SGL +LH+ +P I HR++ ++L+ + + IAD GLA +
Sbjct: 135 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 194
Query: 365 GHAQ--VSTSIVAGTVGYIAPEY-HQTLKFS-----EKCDIYSFGVLL 404
Q V + GT Y+APE +T++ ++ DI++FG++L
Sbjct: 195 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 242
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAE-IMTAGQIRHRNIVPLLAHMV 275
GE++ E + G A+KKV+ + RAE +M + IVPL +
Sbjct: 107 GEVHRME-DKQTGFQCAVKKVR----------LEVFRAEELMACAGLTSPRIVPLYGAVR 155
Query: 276 RPDCHLLVSEFMKNGSLLEILNDVSQG----RRELEWLARHRIARGIVSGLEYLHMYHRP 331
+ E ++ GSL +++ + QG R L +L + + GLEYLH
Sbjct: 156 EGPWVNIFMELLEGGSLGQLVKE--QGCLPEDRALYYLGQ------ALEGLEYLHSR--- 204
Query: 332 RIIHRNITPSSVLIDDD-MEARIADFGLA-RLMPDGHAQ--VSTSIVAGTVGYIAPEYHQ 387
RI+H ++ +VL+ D A + DFG A L PDG + ++ + GT ++APE
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 388 TLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQ 419
K D++S ++ ++ G P FF+
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFR 296
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 206 ASLEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
A ++K R +++G Y A+ IKK ++ +S + + E+ +I+H
Sbjct: 25 AVVKKCREKSTGLQYAAKF---------IKK-RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
N++ L +L+ E + G L + L + + L + I++G+ YL
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL 130
Query: 326 HMYHRPRIIHRNITPSSVLIDD----DMEARIADFGLARLMPDGHAQVSTSIVAGTVGYI 381
H +I H ++ P ++++ D +I DFGLA + G+ + + GT ++
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFV 184
Query: 382 APEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
APE + D++S GV+ +L+ G P F T++++L
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETL 226
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 215 ASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVR--AEIMTAGQIRHRNIVPLL- 271
A G +Y A P S G +A+K V+ V N + + VR A + H N+V L+
Sbjct: 16 AYGTVYKARDPHS-GHFVALKSVR-VPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 272 -AHMVRPDCHLLVSEFMK--NGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
R D + V+ + + L L+ E + + R + GL++LH
Sbjct: 74 VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD--LMRQFLRGLDFLHAN 131
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
I+HR++ P ++L+ ++ADFGLAR+ Q++ + V T+ Y APE
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVTLWYRAPEVLLQ 185
Query: 389 LKFSEKCDIYSFGVLLA 405
++ D++S G + A
Sbjct: 186 STYATPVDMWSVGCIFA 202
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCH----LLVSEFMKNGSLLEILNDVSQGRRELEWL 309
E+ +RH NI+ +A + L++ + + GSL + L + L+ +
Sbjct: 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTV 105
Query: 310 ARHRIARGIVSGLEYLHM-----YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD 364
+ RI I SGL +LH+ +P I HR++ ++L+ + + IAD GLA +
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 365 GHAQ--VSTSIVAGTVGYIAPEY-HQTLKFS-----EKCDIYSFGVLL 404
Q V + GT Y+APE +T++ ++ DI++FG++L
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 193 KEDLAFLEKEDCSAS-------LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
KED FL+K + A E+I++ +G S G+++ +K ++ ++ +
Sbjct: 23 KED--FLKKWENPAQNTAHLDQFERIKTLGTG---------SFGRVMLVKHMETGNHYAM 71
Query: 246 NIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR- 303
I +Q +++ QI H N +L + P L F N +L ++ V G
Sbjct: 72 KILDKQ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 304 --------RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
R E AR A+ IV EYLH +I+R++ P ++LID ++ D
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTD 184
Query: 356 FGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
FG A+ + T + GT Y+APE + +++ D ++ GVL+ + G P
Sbjct: 185 FGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 193 KEDLAFLEKEDCSAS-------LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
KED FL+K + A E+I++ +G S G+++ +K ++ ++ +
Sbjct: 24 KED--FLKKWENPAQNTAHLDQFERIKTLGTG---------SFGRVMLVKHMETGNHYAM 72
Query: 246 NIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR- 303
I +Q +++ QI H N +L + P L F N +L ++ V G
Sbjct: 73 KILDKQ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 304 --------RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
R E AR A+ IV EYLH +I+R++ P ++LID ++ D
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTD 185
Query: 356 FGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
FG A+ + T + GT Y+APE + +++ D ++ GVL+ + G P
Sbjct: 186 FGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 119 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 171
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 172 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 40/242 (16%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 62 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 112
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 113 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 170
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL 389
I HR+I P ++L+D D ++ DFG A+ + G VS YI Y++
Sbjct: 171 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---------YICSRYYRAP 219
Query: 390 K-------FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSEN 438
+ ++ D++S G +LA L++G+ P D E K L R + N
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 279
Query: 439 PN 440
PN
Sbjct: 280 PN 281
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAE-IMTAGQIRHRNIVPLLAHMV 275
GE++ E + G A+KKV+ + RAE +M + IVPL +
Sbjct: 88 GEVHRME-DKQTGFQCAVKKVR----------LEVFRAEELMACAGLTSPRIVPLYGAVR 136
Query: 276 RPDCHLLVSEFMKNGSLLEILNDVSQG----RRELEWLARHRIARGIVSGLEYLHMYHRP 331
+ E ++ GSL +++ + QG R L +L + + GLEYLH
Sbjct: 137 EGPWVNIFMELLEGGSLGQLVKE--QGCLPEDRALYYLGQ------ALEGLEYLHSR--- 185
Query: 332 RIIHRNITPSSVLIDDD-MEARIADFGLA-RLMPDGHAQ--VSTSIVAGTVGYIAPEYHQ 387
RI+H ++ +VL+ D A + DFG A L PDG + ++ + GT ++APE
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 388 TLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQ 419
K D++S ++ ++ G P FF+
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFR 277
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+++ID ++ DFGLA+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 193 KEDLAFLEKEDCSAS-------LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
KED FL+K + A E+I++ +G S G+++ +K ++ ++ +
Sbjct: 23 KED--FLKKWENPAQNTAHLDQFERIKTLGTG---------SFGRVMLVKHMETGNHYAM 71
Query: 246 NIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR- 303
I +Q +++ QI H N +L + P L F N +L ++ V G
Sbjct: 72 KILDKQ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 304 --------RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
R E AR A+ IV EYLH +I+R++ P ++LID ++ D
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTD 184
Query: 356 FGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
FG A+ + T + GT Y+APE + +++ D ++ GVL+ + G P
Sbjct: 185 FGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 193 KEDLAFLEKEDCSAS-------LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLL 245
KED FL+K + A E+I++ +G S G+++ +K ++ ++ +
Sbjct: 23 KED--FLKKWENPAQNTAHLDQFERIKTLGTG---------SFGRVMLVKHMETGNHYAM 71
Query: 246 NIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGR- 303
I +Q +++ QI H N +L + P L F N +L ++ V G
Sbjct: 72 KILDKQ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 304 --------RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIAD 355
R E AR A+ IV EYLH +I+R++ P ++LID ++ D
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTD 184
Query: 356 FGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
FG A+ + T + GT Y+APE + +++ D ++ GVL+ + G P
Sbjct: 185 FGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 119 MVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 171
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 172 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 40/242 (16%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 72 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 122
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 123 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 180
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL 389
I HR+I P ++L+D D ++ DFG A+ + G VS YI Y++
Sbjct: 181 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---------YICSRYYRAP 229
Query: 390 K-------FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSEN 438
+ ++ D++S G +LA L++G+ P D E K L R + N
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 289
Query: 439 PN 440
PN
Sbjct: 290 PN 291
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 119 MVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 171
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 172 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 226 ESNGKMIAIKKVKQVDNSLLNIKM-RQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVS 284
++ +++AIKK+K S + R EI ++ H NI+ LL LV
Sbjct: 32 KNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVF 91
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVS--GLEYLHMYHRPRIIHRNITPSS 342
+FM+ L I+ D S L H A +++ GLEYLH + I+HR++ P++
Sbjct: 92 DFMET-DLEVIIKDNS-----LVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNN 142
Query: 343 VLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE-YHQTLKFSEKCDIYSFG 401
+L+D++ ++ADFGLA+ + +V T Y APE + D+++ G
Sbjct: 143 LLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVG 200
Query: 402 VLLAVLVM 409
+LA L++
Sbjct: 201 CILAELLL 208
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PDGHAQVSTSIVAGTVGY 380
LE +H H+ I+H ++ P++ LI D M ++ DFG+A M PD V S V GTV Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQV-GTVNY 194
Query: 381 IAPEYHQTLKFSEK-----------CDIYSFGVLLAVLVMGKLP 413
+ PE + + S + D++S G +L + GK P
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 117/273 (42%), Gaps = 45/273 (16%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL 296
VK + + ++R + +E Q+ H +++ L + LL+ E+ K GSL L
Sbjct: 58 VKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Query: 297 ND---VSQG-----------------RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
+ V G R L A I G++YL +++HR
Sbjct: 118 RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHR 174
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
++ ++L+ + + +I+DFGL+R + + + V S V ++A E ++ + D
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 397 IYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQ 455
++SFGVLL ++ +G P + + L ++ E P+ N EE
Sbjct: 235 VWSFGVLLWEIVTLGGNP----YPGIPPERLFNLLKTGHRMERPD---------NCSEEM 281
Query: 456 MLLVLKIACFCTLDDPEERPN----SKDVRSML 484
L+L+ C +P++RP SKD+ M+
Sbjct: 282 YRLMLQ----CWKQEPDKRPVFADISKDLEKMM 310
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 119 MVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 171
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 172 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 40/242 (16%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 68 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 118
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 119 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 176
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL 389
I HR+I P ++L+D D ++ DFG A+ + G VS YI Y++
Sbjct: 177 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---------YICSRYYRAP 225
Query: 390 K-------FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSEN 438
+ ++ D++S G +LA L++G+ P D E K L R + N
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285
Query: 439 PN 440
PN
Sbjct: 286 PN 287
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 139 MVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 191
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 192 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 247 VLIYEMAAGYPP 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 40/242 (16%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 70 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 120
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 121 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 178
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL 389
I HR+I P ++L+D D ++ DFG A+ + G VS YI Y++
Sbjct: 179 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---------YICSRYYRAP 227
Query: 390 K-------FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSEN 438
+ ++ D++S G +LA L++G+ P D E K L R + N
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 287
Query: 439 PN 440
PN
Sbjct: 288 PN 289
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 40/242 (16%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 113 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 163
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 164 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 221
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL 389
I HR+I P ++L+D D ++ DFG A+ + G VS YI Y++
Sbjct: 222 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---------YICSRYYRAP 270
Query: 390 K-------FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSEN 438
+ ++ D++S G +LA L++G+ P D E K L R + N
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 330
Query: 439 PN 440
PN
Sbjct: 331 PN 332
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 111 MVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 163
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 164 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 218
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 219 VLIYEMAAGYPP 230
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 119 MVMEYAPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 171
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+++ID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 172 NLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 40/242 (16%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 39 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 89
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 90 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 147
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL 389
I HR+I P ++L+D D ++ DFG A+ + G VS YI Y++
Sbjct: 148 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---------YICSRYYRAP 196
Query: 390 K-------FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSEN 438
+ ++ D++S G +LA L++G+ P D E K L R + N
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 256
Query: 439 PN 440
PN
Sbjct: 257 PN 258
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 68 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 118
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 119 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 176
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 177 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELIFGA 231
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 287
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 117/273 (42%), Gaps = 45/273 (16%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL 296
VK + + ++R + +E Q+ H +++ L + LL+ E+ K GSL L
Sbjct: 58 VKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Query: 297 ND---VSQG-----------------RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
+ V G R L A I G++YL +++HR
Sbjct: 118 RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHR 174
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
++ ++L+ + + +I+DFGL+R + + + V S V ++A E ++ + D
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 397 IYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQ 455
++SFGVLL ++ +G P + + L ++ E P+ N EE
Sbjct: 235 VWSFGVLLWEIVTLGGNP----YPGIPPERLFNLLKTGHRMERPD---------NCSEEM 281
Query: 456 MLLVLKIACFCTLDDPEERPN----SKDVRSML 484
L+L+ C +P++RP SKD+ M+
Sbjct: 282 YRLMLQ----CWKQEPDKRPVFADISKDLEKMM 310
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+++ID ++ DFGLA+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYAPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+++ID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 46 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 96
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 97 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 154
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 155 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELIFGA 209
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 265
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 16/197 (8%)
Query: 215 ASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVR--AEIMTAGQIRHRNIVPLL- 271
A G +Y A P S G +A+K V+ V N + + VR A + H N+V L+
Sbjct: 16 AYGTVYKARDPHS-GHFVALKSVR-VPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 272 -AHMVRPDCHLLVSEFMK--NGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
R D + V+ + + L L+ E + + R + GL++LH
Sbjct: 74 VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD--LMRQFLRGLDFLHAN 131
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
I+HR++ P ++L+ ++ADFGLAR+ Q++ V T+ Y APE
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVTLWYRAPEVLLQ 185
Query: 389 LKFSEKCDIYSFGVLLA 405
++ D++S G + A
Sbjct: 186 STYATPVDMWSVGCIFA 202
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 53 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 103
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 104 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 161
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 162 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAPELIFGA 216
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 217 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 272
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ + G+L E L N V + + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ +IADFGLAR + +
Sbjct: 159 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 12/196 (6%)
Query: 217 GEIYIAELPESNGKMIAIK-KVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV 275
G + L + +G + + K ++DNS ++ + +E H N++ LL +
Sbjct: 48 GSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR-EIEEFLSEAACMKDFSHPNVIRLLGVCI 106
Query: 276 RPDCH-----LLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
+++ FMK G L L + + G + + + I G+EYL
Sbjct: 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS-- 164
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
+HR++ + ++ DDM +ADFGL++ + G I V +IA E
Sbjct: 165 -NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD 223
Query: 389 LKFSEKCDIYSFGVLL 404
++ K D+++FGV +
Sbjct: 224 RVYTSKSDVWAFGVTM 239
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
LEKI G ++ A+ E++ +++A+K+V+ +D+ + +R EI +++H+NI
Sbjct: 7 LEKIGEGTYGTVFKAKNRETH-EIVALKRVR-LDDDDEGVPSSALR-EICLLKELKHKNI 63
Query: 268 VPLLAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
V L ++ D L LV EF L+ D G + E + ++ GL + H
Sbjct: 64 V-RLHDVLHSDKKLTLVFEFCDQD--LKKYFDSCNGDLDPEIVKSFLFQ--LLKGLGFCH 118
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ ++HR++ P ++LI+ + E ++ADFGLAR S +V T+ Y P+
Sbjct: 119 SRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVL 173
Query: 387 QTLK-FSEKCDIYSFGVLLAVLVMGKLP 413
K +S D++S G + A L P
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 42 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 92
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 93 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 150
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 151 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAPELIFGA 205
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 206 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 261
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 40/242 (16%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 47 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 97
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 98 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 155
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL 389
I HR+I P ++L+D D ++ DFG A+ + G VS YI Y++
Sbjct: 156 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---------YICSRYYRAP 204
Query: 390 K-------FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSEN 438
+ ++ D++S G +LA L++G+ P D E K L R + N
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 264
Query: 439 PN 440
PN
Sbjct: 265 PN 266
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 261 QIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVS 320
++H +V L D V +++ G E+ + + R LE AR A I S
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGG---ELFYHLQRERCFLEPRARFYAAE-IAS 150
Query: 321 GLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
L YLH + I++R++ P ++L+D + DFGL + + ++ +TS GT Y
Sbjct: 151 ALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEY 205
Query: 381 IAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+APE + D + G +L ++ G P
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 38 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 88
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 89 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 146
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 147 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAPELIFGA 201
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 202 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 257
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 33/191 (17%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILN---------DVSQGR---------- 303
+H NIV LL L+++E+ G LL L ++ G+
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 304 RELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LM 362
R LE + + G+ +L IHR++ +VL+ + A+I DFGLAR +M
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 363 PDGHAQVSTSIVAGT----VGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDF 417
D S IV G V ++APE ++ + D++S+G+LL + +G P
Sbjct: 210 ND-----SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 264
Query: 418 FQHTEEKSLVR 428
+++ LV+
Sbjct: 265 LVNSKFYKLVK 275
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 46 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 96
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 97 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 154
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 155 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAPELIFGA 209
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 265
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 47/204 (23%)
Query: 319 VSGLEYLHMYHRPRIIHRNITPSSVLID-----DDMEARIADFGLARLMPDG-HAQVSTS 372
SGL +LH + I+HR++ P ++LI ++A I+DFGL + + G H+ S
Sbjct: 128 TSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 373 IVAGTVGYIAPEYHQTLKFSEKC--------DIYSFG-VLLAVLVMGKLPSDDFFQHTEE 423
V GT G+IAPE SE C DI+S G V V+ G P Q
Sbjct: 185 GVPGTEGWIAPEM-----LSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239
Query: 424 KSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSM 483
L + + E I +L+ E+M+ + DP++RP++K V
Sbjct: 240 ILLGACSLDCLHPEKHEDVIARELI-----EKMIAM----------DPQKRPSAKHV--- 281
Query: 484 LSDTALIKDVDFLKMHKRMDFDND 507
+K F + K++ F D
Sbjct: 282 ------LKHPFFWSLEKQLQFFQD 299
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 16/237 (6%)
Query: 208 LEKIRSRASGEIYIAE--LPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR 265
L+ + + A G++++ GK+ A+K +K+ R E IR
Sbjct: 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS 118
Query: 266 NIVPLLAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEY 324
+ L + + + L L+ +++ G E+ +SQ R E + + IV LE+
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGG---ELFTHLSQRERFTEHEVQIYVGE-IVLALEH 174
Query: 325 LHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
LH + II+R+I ++L+D + + DFGL++ + + GT+ Y+AP+
Sbjct: 175 LH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF-CGTIEYMAPD 230
Query: 385 YHQT--LKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENP 439
+ + D +S GVL+ L+ G P F E+ S R ++ SE P
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASP---FTVDGEKNSQAEISRRILKSEPP 284
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 34 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 84
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 85 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 142
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 143 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAPELIFGA 197
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 35 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 85
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 86 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 143
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 144 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAPELIFGA 198
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 199 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 263 RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL--------------NDVSQGRRELEW 308
+H+NI+ LL + ++ + G+L E L N V + + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 309 L--ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGH 366
L +++ARG +EYL + IHR++ +VL+ ++ +IADFGLAR + +
Sbjct: 159 LVSCTYQLARG----MEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 367 AQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLP 413
T+ V ++APE ++ + D++SFGVL+ + +G P
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 119 MVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 171
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+++ID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 172 NLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 119 MVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 171
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+++ID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 172 NLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 34 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 84
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 85 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 142
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 143 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAPELIFGA 197
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 119 MVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 171
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+++ID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 172 NLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 34 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 84
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 85 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 142
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 143 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPELIFGA 197
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+++ID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 322 LEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PDGHAQVSTSIVAGTVGY 380
LE +H H+ I+H ++ P++ LI D M ++ DFG+A M PD + V S V G V Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GAVNY 222
Query: 381 IAPEYHQTLKFSEK-----------CDIYSFGVLLAVLVMGKLP 413
+ PE + + S + D++S G +L + GK P
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 11/178 (6%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLA 310
Q+R EI + H NI+ L + L+ E+ G L + L
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT-------FD 121
Query: 311 RHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVS 370
R A + + L H ++IHR+I P ++L+ E +IADFG + P +
Sbjct: 122 EQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LR 177
Query: 371 TSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVR 428
+ GT+ Y+ PE + +EK D++ GVL L++G P + + + +V+
Sbjct: 178 RKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVK 235
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+++ID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 28/138 (20%)
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLID-------------DDMEARIADFGLAR 360
+ R I SG+ +LH +IIHR++ P ++L+ +++ I+DFGL +
Sbjct: 120 LLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 361 LMPDGHAQVSTSI--VAGTVGYIAPE-------YHQTLKFSEKCDIYSFG-VLLAVLVMG 410
+ G + T++ +GT G+ APE + + DI+S G V +L G
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 411 KLPSDDFFQHTEEKSLVR 428
K P D +++ E +++R
Sbjct: 237 KHPFGD--KYSRESNIIR 252
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 16/197 (8%)
Query: 215 ASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVR--AEIMTAGQIRHRNIVPLL- 271
A G +Y A P S G +A+K V+ V N + + VR A + H N+V L+
Sbjct: 16 AYGTVYKARDPHS-GHFVALKSVR-VPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 272 -AHMVRPDCHLLVSEFMK--NGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMY 328
R D + V+ + + L L+ E + + R + GL++LH
Sbjct: 74 VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD--LMRQFLRGLDFLHAN 131
Query: 329 HRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQT 388
I+HR++ P ++L+ ++ADFGLAR+ Q++ V T+ Y APE
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVTLWYRAPEVLLQ 185
Query: 389 LKFSEKCDIYSFGVLLA 405
++ D++S G + A
Sbjct: 186 STYATPVDMWSVGCIFA 202
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 36/250 (14%)
Query: 180 QNRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKM-IAIKKVK 238
N PTI+ P+++ D+ F + I G++ A + + +M AIK++K
Sbjct: 9 NNPDPTIY-PVLDWNDIKFQDV---------IGEGNFGQVLKARIKKDGLRMDAAIKRMK 58
Query: 239 QVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILN 297
+ + R E+ ++ H NI+ LL L E+ +G+LL+ L
Sbjct: 59 EYASK---DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL- 114
Query: 298 DVSQGRRELEWLARHRIARGIVSGLEYLHMYH-------------RPRIIHRNITPSSVL 344
+ R LE IA S L + H + + IHRN+ ++L
Sbjct: 115 ---RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNIL 171
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+ ++ A+IADFGL+R V ++ V ++A E ++ D++S+GVLL
Sbjct: 172 VGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 228
Query: 405 -AVLVMGKLP 413
++ +G P
Sbjct: 229 WEIVSLGGTP 238
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 42/244 (17%)
Query: 181 NRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIY-IAELPESN-GKMIAIKKVK 238
NRGP P +C L + G+++ + ++ +N GK+ A+K +K
Sbjct: 8 NRGPEKIRP-------------ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK 54
Query: 239 QVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILND 298
K VR TA RNI+ + H D L+ F G L IL
Sbjct: 55 ---------KAMIVRNAKDTAHTKAERNILEEVKHPFIVD---LIYAFQTGGKLYLILEY 102
Query: 299 VSQGR------RE---LEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
+S G RE +E A +A I L +LH + II+R++ P +++++
Sbjct: 103 LSGGELFMQLEREGIFMEDTACFYLAE-ISMALGHLH---QKGIIYRDLKPENIMLNHQG 158
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
++ DFGL + H T GT+ Y+APE + D +S G L+ ++
Sbjct: 159 HVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
Query: 410 GKLP 413
G P
Sbjct: 217 GAPP 220
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 36/252 (14%)
Query: 178 GGQNRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKM-IAIKK 236
G N PTI+ P+++ D+ F + I G++ A + + +M AIK+
Sbjct: 10 GKNNPDPTIY-PVLDWNDIKFQDV---------IGEGNFGQVLKARIKKDGLRMDAAIKR 59
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLVSEFMKNGSLLEI 295
+K+ + R E+ ++ H NI+ LL L E+ +G+LL+
Sbjct: 60 MKEYASK---DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 116
Query: 296 LNDVSQGRRELEWLARHRIARGIVSGLEYLHMYH-------------RPRIIHRNITPSS 342
L + R LE IA S L + H + + IHR++ +
Sbjct: 117 L----RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN 172
Query: 343 VLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
+L+ ++ A+IADFGL+R V ++ V ++A E ++ D++S+GV
Sbjct: 173 ILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 229
Query: 403 LLAVLV-MGKLP 413
LL +V +G P
Sbjct: 230 LLWEIVSLGGTP 241
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 45/273 (16%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL 296
VK + + ++R + +E Q+ H +++ L + LL+ E+ K GSL L
Sbjct: 58 VKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Query: 297 ND---VSQG-----------------RRELEWLARHRIARGIVSGLEYLHMYHRPRIIHR 336
+ V G R L A I G++YL ++HR
Sbjct: 118 RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHR 174
Query: 337 NITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCD 396
++ ++L+ + + +I+DFGL+R + + + V S V ++A E ++ + D
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 397 IYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQ 455
++SFGVLL ++ +G P + + L ++ E P+ N EE
Sbjct: 235 VWSFGVLLWEIVTLGGNP----YPGIPPERLFNLLKTGHRMERPD---------NCSEEM 281
Query: 456 MLLVLKIACFCTLDDPEERPN----SKDVRSML 484
L+L+ C +P++RP SKD+ M+
Sbjct: 282 YRLMLQ----CWKQEPDKRPVFADISKDLEKMM 310
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 24/198 (12%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
G A+KKV+ +++ +V + AG R IVPL + + E +
Sbjct: 96 TGFQCAVKKVR--------LEVFRVEELVACAGLSSPR-IVPLYGAVREGPWVNIFMELL 146
Query: 288 KNGSLLEILNDVS--QGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ GSL +++ + R L +L + + GLEYLH RI+H ++ +VL+
Sbjct: 147 EGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLEYLHTR---RILHGDVKADNVLL 197
Query: 346 DDD-MEARIADFGLAR-LMPDGHAQ--VSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
D A + DFG A L PDG + ++ + GT ++APE K DI+S
Sbjct: 198 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 257
Query: 402 VLLAVLVMGKLPSDDFFQ 419
++ ++ G P +F+
Sbjct: 258 CMMLHMLNGCHPWTQYFR 275
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H VA
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 194 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLM-PD-GHAQVSTSIVA 375
I+ GL+Y+H ++HR++ PS++L++ + +I DFGLAR+ PD H VA
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 376 GTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGK 411
T Y APE K +++ DI+S G +LA ++ +
Sbjct: 195 -TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E+ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
+++ID ++ DFG A+ + T + GT Y+APE + +++ D ++ G
Sbjct: 171 NLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 165 PTTPSLLLAAVRGGGQNRGPTIFSPLIEKEDLAFLEKEDCSAS---------LEKIRSRA 215
PTT +L G G IE+E A +E AS L ++ R
Sbjct: 15 PTTENLYFQGAMGSG-----------IEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRG 63
Query: 216 S-GEIYIAELPESNGKMIAIKKVK-QVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAH 273
S ++ + L +++ ++ A++ VK ++ N +I Q + H +V L +
Sbjct: 64 SYAKVLLVRLKKTD-RIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS-NHPFLVGLHSC 121
Query: 274 MVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
V E++ G L+ + + R+ E AR A I L YLH I
Sbjct: 122 FQTESRLFFVIEYVNGGDLM---FHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGI 174
Query: 334 IHRNITPSSVLIDDDMEARIADFGLAR--LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF 391
I+R++ +VL+D + ++ D+G+ + L P +TS GT YIAPE + +
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSTFCGTPNYIAPEILRGEDY 230
Query: 392 SEKCDIYSFGVLLAVLVMGKLPSD 415
D ++ GVL+ ++ G+ P D
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCH----LLVSEFMKNGSLLEILNDVSQGRRELEWL 309
EI +RH NI+ +A ++ L++++ +NGSL + L + + +
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM--- 136
Query: 310 ARHRIARGIVSGLEYLHM-----YHRPRIIHRNITPSSVLIDDDMEARIADFGLA-RLMP 363
++A VSGL +LH +P I HR++ ++L+ + IAD GLA + +
Sbjct: 137 --LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS 194
Query: 364 DGH-AQVSTSIVAGTVGYIAPEY------HQTLKFSEKCDIYSFGVLL 404
D + + + GT Y+ PE + D+YSFG++L
Sbjct: 195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 314 IARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI 373
+ R + GL++LH I+HR++ P ++L+ ++ADFGLAR+ Q++ +
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTP 178
Query: 374 VAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLA 405
V T+ Y APE ++ D++S G + A
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFA 210
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 24/198 (12%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
G A+KKV+ +++ +V + AG R IVPL + + E +
Sbjct: 82 TGFQCAVKKVR--------LEVFRVEELVACAGLSSPR-IVPLYGAVREGPWVNIFMELL 132
Query: 288 KNGSLLEILNDVS--QGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ GSL +++ + R L +L + + GLEYLH RI+H ++ +VL+
Sbjct: 133 EGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLEYLHTR---RILHGDVKADNVLL 183
Query: 346 DDD-MEARIADFGLAR-LMPDGHAQ--VSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
D A + DFG A L PDG + ++ + GT ++APE K DI+S
Sbjct: 184 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 243
Query: 402 VLLAVLVMGKLPSDDFFQ 419
++ ++ G P +F+
Sbjct: 244 CMMLHMLNGCHPWTQYFR 261
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 321 GLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVG 379
G++YL +HR++ +VL+ A+I+DFGL++ L D + + + V
Sbjct: 123 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVK 179
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLL 404
+ APE KFS K D++SFGVL+
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLM 204
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 42/244 (17%)
Query: 181 NRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIY-IAELPESN-GKMIAIKKVK 238
NRGP P +C L + G+++ + ++ +N GK+ A+K +K
Sbjct: 8 NRGPEKIRP-------------ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK 54
Query: 239 QVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILND 298
K VR TA RNI+ + H D L+ F G L IL
Sbjct: 55 ---------KAMIVRNAKDTAHTKAERNILEEVKHPFIVD---LIYAFQTGGKLYLILEY 102
Query: 299 VSQGR------RE---LEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM 349
+S G RE +E A +A I L +LH + II+R++ P +++++
Sbjct: 103 LSGGELFMQLEREGIFMEDTACFYLAE-ISMALGHLH---QKGIIYRDLKPENIMLNHQG 158
Query: 350 EARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVM 409
++ DFGL + H T GT+ Y+APE + D +S G L+ ++
Sbjct: 159 HVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
Query: 410 GKLP 413
G P
Sbjct: 217 GAPP 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 326 HMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE- 384
H+ +IIHR+I PS++L+D ++ DFG++ + D A+ AG Y+APE
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD---AGCRPYMAPER 196
Query: 385 ---YHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNR 441
+ + D++S G+ L L G+ P + + S+ + V+ + P
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFP------YPKWNSVFDQLTQVVKGDPPQ- 249
Query: 442 AIDSKLLGNGYEEQM-LLVLKIACFCTLDDPEERPNSKDV 480
L N E + + C D +RP K++
Sbjct: 250 ------LSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 321 GLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVG 379
G++YL +HR++ +VL+ A+I+DFGL++ L D + + + V
Sbjct: 117 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 173
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLL 404
+ APE KFS K D++SFGVL+
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLM 198
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 321 GLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVG 379
G++YL +HR++ +VL+ A+I+DFGL++ L D + + + V
Sbjct: 129 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 185
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLL 404
+ APE KFS K D++SFGVL+
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLM 210
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 23/126 (18%)
Query: 280 HLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNIT 339
+L + +K+ +++E+++ VS G + LE +HR++
Sbjct: 97 YLQQNRHVKDKNIIELVHQVSMGMKYLE----------------------ESNFVHRDLA 134
Query: 340 PSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ A+I+DFGL++ L D + + + V + APE KFS K D++
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 194
Query: 399 SFGVLL 404
SFGVL+
Sbjct: 195 SFGVLM 200
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 24/198 (12%)
Query: 228 NGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFM 287
G A+KKV+ +++ +V + AG R IVPL + + E +
Sbjct: 98 TGFQCAVKKVR--------LEVFRVEELVACAGLSSPR-IVPLYGAVREGPWVNIFMELL 148
Query: 288 KNGSLLEILNDVS--QGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
+ GSL +++ + R L +L + + GLEYLH RI+H ++ +VL+
Sbjct: 149 EGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLEYLHTR---RILHGDVKADNVLL 199
Query: 346 DDD-MEARIADFGLAR-LMPDGHAQ--VSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
D A + DFG A L PDG + ++ + GT ++APE K DI+S
Sbjct: 200 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 259
Query: 402 VLLAVLVMGKLPSDDFFQ 419
++ ++ G P +F+
Sbjct: 260 CMMLHMLNGCHPWTQYFR 277
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 23/126 (18%)
Query: 280 HLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNIT 339
+L + +K+ +++E+++ VS G + LE +HR++
Sbjct: 101 YLQQNRHVKDKNIIELVHQVSMGMKYLE----------------------ESNFVHRDLA 138
Query: 340 PSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ A+I+DFGL++ L D + + + V + APE KFS K D++
Sbjct: 139 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 399 SFGVLL 404
SFGVL+
Sbjct: 199 SFGVLM 204
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 23/126 (18%)
Query: 280 HLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNIT 339
+L + +K+ +++E+++ VS G + LE +HR++
Sbjct: 117 YLQQNRHVKDKNIIELVHQVSMGMKYLE----------------------ESNFVHRDLA 154
Query: 340 PSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ A+I+DFGL++ L D + + + V + APE KFS K D++
Sbjct: 155 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 399 SFGVLL 404
SFGVL+
Sbjct: 215 SFGVLM 220
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 23/126 (18%)
Query: 280 HLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNIT 339
+L + +K+ +++E+++ VS G + LE +HR++
Sbjct: 117 YLQQNRHVKDKNIIELVHQVSMGMKYLE----------------------ESNFVHRDLA 154
Query: 340 PSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ A+I+DFGL++ L D + + + V + APE KFS K D++
Sbjct: 155 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 399 SFGVLL 404
SFGVL+
Sbjct: 215 SFGVLM 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 25/200 (12%)
Query: 236 KVKQVDNSLLNIKMRQVRAEIMTAGQIR-------------HRNIVPLLAHMVRPDCH-- 280
++KQ D S + + ++ ++A+I+ + I H ++ L+ +R
Sbjct: 43 QLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102
Query: 281 ----LLVSEFMKNGSLLEIL--NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRII 334
+++ FMK+G L L + + + L R I G+EYL + I
Sbjct: 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FI 159
Query: 335 HRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEK 394
HR++ + ++ +DM +ADFGL+R + G V ++A E ++
Sbjct: 160 HRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVH 219
Query: 395 CDIYSFGVLL-AVLVMGKLP 413
D+++FGV + ++ G+ P
Sbjct: 220 SDVWAFGVTMWEIMTRGQTP 239
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 23/126 (18%)
Query: 280 HLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNIT 339
+L + +K+ +++E+++ VS G + LE +HR++
Sbjct: 115 YLQQNRHVKDKNIIELVHQVSMGMKYLE----------------------ESNFVHRDLA 152
Query: 340 PSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ A+I+DFGL++ L D + + + V + APE KFS K D++
Sbjct: 153 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 212
Query: 399 SFGVLL 404
SFGVL+
Sbjct: 213 SFGVLM 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHL----LVSEFMKNGSLLEILNDVSQGRRELEWL 309
AEI +RH NI+ +A + + LVS++ ++GSL + LN R +
Sbjct: 85 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVE 139
Query: 310 ARHRIARGIVSGLEYLHM-----YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD 364
++A SGL +LHM +P I HR++ ++L+ + IAD GLA + D
Sbjct: 140 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD 198
Query: 365 GHA---QVSTSIVAGTVGYIAPEY------HQTLKFSEKCDIYSFGVLL 404
++ + GT Y+APE + + ++ DIY+ G++
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 247
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT Y+AP + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 30/220 (13%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L K+ SGE++ G I +K +K D S K R E H N+
Sbjct: 15 LTKLNENHSGELWKGRW---QGNDIVVKVLKVRDWS--TRKSRDFNEECPRLRIFSHPNV 69
Query: 268 VPLLAHMVRPDCH--LLVSEFMKNGSLLEILND-----VSQGRRELEWLARHRIARGIVS 320
+P+L P L++ +M GSL +L++ V Q + + A +
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAV-------KFALDMAR 122
Query: 321 GLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
G+ +LH P I + SV+ID+DM ARI+ M D + +
Sbjct: 123 GMAFLHTL-EPLIPRHALNSRSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAW 174
Query: 381 IAPEYHQTLK---FSEKCDIYSFGVLLAVLVMGKLPSDDF 417
+APE Q D++SF VLL LV ++P D
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHL----LVSEFMKNGSLLEILNDVSQGRRELEWL 309
AEI +RH NI+ +A + + LVS++ ++GSL + LN R +
Sbjct: 47 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVE 101
Query: 310 ARHRIARGIVSGLEYLHM-----YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD 364
++A SGL +LHM +P I HR++ ++L+ + IAD GLA + D
Sbjct: 102 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD 160
Query: 365 GHA---QVSTSIVAGTVGYIAPEY------HQTLKFSEKCDIYSFGVLL 404
++ + GT Y+APE + + ++ DIY+ G++
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 209
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHL----LVSEFMKNGSLLEILNDVSQGRRELEWL 309
AEI +RH NI+ +A + + LVS++ ++GSL + LN R +
Sbjct: 72 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVE 126
Query: 310 ARHRIARGIVSGLEYLHM-----YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD 364
++A SGL +LHM +P I HR++ ++L+ + IAD GLA + D
Sbjct: 127 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD 185
Query: 365 GHA---QVSTSIVAGTVGYIAPEY------HQTLKFSEKCDIYSFGVLL 404
++ + GT Y+APE + + ++ DIY+ G++
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 234
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 130/291 (44%), Gaps = 49/291 (16%)
Query: 215 ASGEIYIAELPESNG----KMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL 270
A G++Y A+ E+ K+I K +++++ ++ I EI+ H IV L
Sbjct: 31 AFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI-------EILATCD--HPYIVKL 81
Query: 271 LAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
L ++ EF G++ I+ ++ +G L +I LE L+ H
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG------LTEPQIQVVCRQMLEALNFLHS 135
Query: 331 PRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY--HQT 388
RIIHR++ +VL+ + + R+ADFG++ + + I GT ++APE +T
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCET 193
Query: 389 LK---FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
+K + K DI+S G+ L + + P E + +R + + S+ P S
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEPPH-------HELNPMRVLLKIAKSDPPTLLTPS 246
Query: 446 KLLGNGYEEQMLLVLKIACFCTLD-DPEERPNSKD------VRSMLSDTAL 489
K + + LKIA LD +PE RP++ V S+ S+ AL
Sbjct: 247 K-----WSVEFRDFLKIA----LDKNPETRPSAAQLLEHPFVSSITSNKAL 288
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHL----LVSEFMKNGSLLEILNDVSQGRRELEWL 309
AEI +RH NI+ +A + + LVS++ ++GSL + LN R +
Sbjct: 49 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVE 103
Query: 310 ARHRIARGIVSGLEYLHM-----YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD 364
++A SGL +LHM +P I HR++ ++L+ + IAD GLA + D
Sbjct: 104 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD 162
Query: 365 GHA---QVSTSIVAGTVGYIAPEY------HQTLKFSEKCDIYSFGVLL 404
++ + GT Y+APE + + ++ DIY+ G++
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 211
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHL----LVSEFMKNGSLLEILNDVSQGRRELEWL 309
AEI +RH NI+ +A + + LVS++ ++GSL + LN R +
Sbjct: 46 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVE 100
Query: 310 ARHRIARGIVSGLEYLHM-----YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD 364
++A SGL +LHM +P I HR++ ++L+ + IAD GLA + D
Sbjct: 101 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD 159
Query: 365 GHA---QVSTSIVAGTVGYIAPEY------HQTLKFSEKCDIYSFGVLL 404
++ + GT Y+APE + + ++ DIY+ G++
Sbjct: 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 208
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 130/291 (44%), Gaps = 49/291 (16%)
Query: 215 ASGEIYIAELPESNG----KMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL 270
A G++Y A+ E+ K+I K +++++ ++ I EI+ H IV L
Sbjct: 23 AFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI-------EILATCD--HPYIVKL 73
Query: 271 LAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
L ++ EF G++ I+ ++ +G L +I LE L+ H
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG------LTEPQIQVVCRQMLEALNFLHS 127
Query: 331 PRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY--HQT 388
RIIHR++ +VL+ + + R+ADFG++ + + I GT ++APE +T
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCET 185
Query: 389 LK---FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDS 445
+K + K DI+S G+ L + + P E + +R + + S+ P S
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEPPH-------HELNPMRVLLKIAKSDPPTLLTPS 238
Query: 446 KLLGNGYEEQMLLVLKIACFCTLD-DPEERPNSKD------VRSMLSDTAL 489
K + + LKIA LD +PE RP++ V S+ S+ AL
Sbjct: 239 K-----WSVEFRDFLKIA----LDKNPETRPSAAQLLEHPFVSSITSNKAL 280
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q + N +++ +R ++ H NIV L
Sbjct: 34 GVVYQAKLCDS-GELVAIKKVLQ-GKAFKNRELQIMR-------KLDHCNIVRLRYFFYS 84
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 85 SGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 142
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 143 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAPELIFGA 197
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 232 IAIKKVKQ-VDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNG 290
+A+K +K+ D+S M +++ M H NIV LL L+ E+ G
Sbjct: 78 VAVKMLKEKADSSEREALMSELK---MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG 134
Query: 291 SLLEILNDVSQ--GRRELEWLARHRI-----------------ARGIVSGLEYLHMYHRP 331
LL L + E+E+ + R+ A + G+E+L
Sbjct: 135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---K 191
Query: 332 RIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGT----VGYIAPEYH 386
+HR++ +VL+ +I DFGLAR +M D S +V G V ++APE
Sbjct: 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD-----SNYVVRGNARLPVKWMAPESL 246
Query: 387 QTLKFSEKCDIYSFGVLL 404
++ K D++S+G+LL
Sbjct: 247 FEGIYTIKSDVWSYGILL 264
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHL----LVSEFMKNGSLLEILNDVSQGRRELEWL 309
AEI +RH NI+ +A + + LVS++ ++GSL + LN R +
Sbjct: 52 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVE 106
Query: 310 ARHRIARGIVSGLEYLHM-----YHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPD 364
++A SGL +LHM +P I HR++ ++L+ + IAD GLA + D
Sbjct: 107 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD 165
Query: 365 GHA---QVSTSIVAGTVGYIAPEY------HQTLKFSEKCDIYSFGVLL 404
++ + GT Y+APE + + ++ DIY+ G++
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 281 LLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
V E++ G L+ + + R+ E AR A I L YLH II+R++
Sbjct: 97 FFVIEYVNGGDLM---FHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKL 149
Query: 341 SSVLIDDDMEARIADFGLAR--LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+D + ++ D+G+ + L P +TS GT YIAPE + + D +
Sbjct: 150 DNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSXFCGTPNYIAPEILRGEDYGFSVDWW 205
Query: 399 SFGVLLAVLVMGKLPSD 415
+ GVL+ ++ G+ P D
Sbjct: 206 ALGVLMFEMMAGRSPFD 222
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 28/236 (11%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVR 276
G +Y A+L +S G+++AIKKV Q D N +++ +R ++ H NIV L
Sbjct: 34 GVVYQAKLCDS-GELVAIKKVLQ-DKRFKNRELQIMR-------KLDHCNIVRLRYFFYS 84
Query: 277 PD-----CHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 85 SGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 142
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-HQT 388
I HR+I P ++L+D D ++ DFG A+ + G VS + Y APE
Sbjct: 143 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSRYYRAPELIFGA 197
Query: 389 LKFSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSENPN 440
++ D++S G +LA L++G+ P D E K L R + NPN
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 231 MIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNG 290
M KVK D L V+ EI RHRNI+ L + +++ EF+
Sbjct: 34 MAKFVKVKGTDQVL-------VKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL 86
Query: 291 SLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDME 350
+ E +N + E E ++ + L++LH ++ I H +I P +++
Sbjct: 87 DIFERINTSAFELNEREIVS---YVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRS 140
Query: 351 A--RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLV 408
+ +I +FG AR + G + ++ Y APE HQ S D++S G L+ VL+
Sbjct: 141 STIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL 197
Query: 409 MGKLPSDDFFQHTEEKSLVRWMRNVMTSE 437
G P F T ++ + N+M +E
Sbjct: 198 SGINP---FLAETNQQ----IIENIMNAE 219
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
LEKI G ++ A+ E++ +++A+K+V+ +D+ + +R EI +++H+NI
Sbjct: 7 LEKIGEGTYGTVFKAKNRETH-EIVALKRVR-LDDDDEGVPSSALR-EICLLKELKHKNI 63
Query: 268 VPLLAHMVRPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 326
V L ++ D L LV EF L+ D G + E + ++ GL + H
Sbjct: 64 V-RLHDVLHSDKKLTLVFEFCDQD--LKKYFDSCNGDLDPEIVKSFLFQ--LLKGLGFCH 118
Query: 327 MYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYH 386
+ ++HR++ P ++LI+ + E ++A+FGLAR S +V T+ Y P+
Sbjct: 119 SRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVL 173
Query: 387 QTLK-FSEKCDIYSFGVLLAVLVMGKLP 413
K +S D++S G + A L P
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 40/242 (16%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q + N +++ +R ++ H NIV L
Sbjct: 34 GVVYQAKLCDS-GELVAIKKVLQ-GKAFKNRELQIMR-------KLDHCNIVRLRYFFYS 84
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 85 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 142
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL 389
I HR+I P ++L+D D ++ DFG A+ + G VS YI Y++
Sbjct: 143 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---------YICSRYYRAP 191
Query: 390 K-------FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSEN 438
+ ++ D++S G +LA L++G+ P D E K L R + N
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 439 PN 440
PN
Sbjct: 252 PN 253
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 252 VRAEIMTAGQIRHRNIVPLLAHMVRPDCH--LLVSEFMKNGSLLEILNDVSQGRRELEWL 309
V+ EI ++RH+N++ L+ + + +V E+ G + E+L+ V + R +
Sbjct: 53 VKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPV--C 109
Query: 310 ARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQV 369
H ++ GLEYLH I+H++I P ++L+ +I+ G+A + A
Sbjct: 110 QAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD 166
Query: 370 STSIVAGTVGYIAPEYHQTL-KFSE-KCDIYSFGVLLAVLVMGKLP 413
+ G+ + PE L FS K DI+S GV L + G P
Sbjct: 167 TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 281 LLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
V E++ G L+ + + R+ E AR A I L YLH II+R++
Sbjct: 82 FFVIEYVNGGDLM---FHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKL 134
Query: 341 SSVLIDDDMEARIADFGLAR--LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+D + ++ D+G+ + L P +TS GT YIAPE + + D +
Sbjct: 135 DNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSXFCGTPNYIAPEILRGEDYGFSVDWW 190
Query: 399 SFGVLLAVLVMGKLPSD 415
+ GVL+ ++ G+ P D
Sbjct: 191 ALGVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 281 LLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
V E++ G L+ + + R+ E AR A I L YLH II+R++
Sbjct: 86 FFVIEYVNGGDLM---FHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKL 138
Query: 341 SSVLIDDDMEARIADFGLAR--LMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+D + ++ D+G+ + L P +TS GT YIAPE + + D +
Sbjct: 139 DNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSXFCGTPNYIAPEILRGEDYGFSVDWW 194
Query: 399 SFGVLLAVLVMGKLPSD 415
+ GVL+ ++ G+ P D
Sbjct: 195 ALGVLMFEMMAGRSPFD 211
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLA 310
+ + EI + H NI+ L LV E G L E + +R
Sbjct: 52 RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH----KRVFRESD 107
Query: 311 RHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI---DDDMEARIADFGLARLMPDGHA 367
RI + ++S + Y H + + HR++ P + L D ++ DFGLA G
Sbjct: 108 AARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ GT Y++P+ + L + +CD +S GV++ VL+ G P
Sbjct: 165 MRTK---VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPP 206
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 40/242 (16%)
Query: 217 GEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMV- 275
G +Y A+L +S G+++AIKKV Q + N +++ +R ++ H NIV L
Sbjct: 34 GVVYQAKLCDS-GELVAIKKVLQ-GKAFKNRELQIMR-------KLDHCNIVRLRYFFYS 84
Query: 276 ----RPDCHL-LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
+ + +L LV +++ ++ + S+ ++ L + + L Y+H +
Sbjct: 85 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG- 142
Query: 331 PRIIHRNITPSSVLIDDDMEA-RIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTL 389
I HR+I P ++L+D D ++ DFG A+ + G VS YI Y++
Sbjct: 143 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---------YICSRYYRAP 191
Query: 390 K-------FSEKCDIYSFGVLLAVLVMGK--LPSDDFFQHTEE--KSLVRWMRNVMTSEN 438
+ ++ D++S G +LA L++G+ P D E K L R + N
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 439 PN 440
PN
Sbjct: 252 PN 253
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 251 QVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLA 310
+ + EI + H NI+ L LV E G L E + +R
Sbjct: 69 RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH----KRVFRESD 124
Query: 311 RHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI---DDDMEARIADFGLARLMPDGHA 367
RI + ++S + Y H + + HR++ P + L D ++ DFGLA G
Sbjct: 125 AARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 181
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ GT Y++P+ + L + +CD +S GV++ VL+ G P
Sbjct: 182 MRTK---VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPP 223
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 230 KMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKN 289
+++AIKK+ +V L++ K ++ EI ++ H ++V +L ++ D V +F +
Sbjct: 79 RVVAIKKILRVFEDLIDCK--RILREIAILNRLNHDHVVKVLDIVIPKD----VEKFDEL 132
Query: 290 GSLLEILN-DVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
+LEI + D + R +L I + + L + H I+HR++ P++ L++ D
Sbjct: 133 YVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQD 192
Query: 349 MEARIADFGLARLM---PDGHAQVSTSIVAGTVGYIAPEYHQTLK--------------- 390
++ DFGLAR + +G++Q+ S + + + + LK
Sbjct: 193 CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAP 252
Query: 391 --------FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRA 442
++E D++S G + A L+ + ++ H + L S +
Sbjct: 253 ELILLQENYTEAIDVWSIGCIFAELL--NMIKENVAYHADRGPLFPGSSCFPLSPDQKAG 310
Query: 443 IDSKLLGNGYEEQMLLVLKI 462
D K G +Q+ ++ I
Sbjct: 311 NDFKFHTRGNRDQLNVIFNI 330
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 22/194 (11%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-SEFMKNGSLLE 294
VK + + + R + +E+ I H N+V LL +P L+V +EF K G+L
Sbjct: 53 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLST 112
Query: 295 IL--------------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
L D+ + LE L + + G+E+L + IHR++
Sbjct: 113 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASR---KCIHRDLAA 167
Query: 341 SSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L+ + +I DFGLAR + V + ++APE ++ + D++SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 401 GVLL-AVLVMGKLP 413
GVLL + +G P
Sbjct: 228 GVLLWEIFSLGASP 241
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 20/192 (10%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-SEFMKNGSLLE 294
VK + + + R + +E+ I H N+V LL +P L+V EF K G+L
Sbjct: 64 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 123
Query: 295 IL------------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSS 342
L D+ + LE L + + G+E+L + IHR++ +
Sbjct: 124 YLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ--VAKGMEFLASR---KXIHRDLAARN 178
Query: 343 VLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV 402
+L+ + +I DFGLAR + V + ++APE ++ + D++SFGV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 403 LL-AVLVMGKLP 413
LL + +G P
Sbjct: 239 LLWEIFSLGASP 250
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 36/250 (14%)
Query: 180 QNRGPTIFSPLIEKEDLAFLEKEDCSASLEKIRSRASGEIYIAELPESNGKM-IAIKKVK 238
N PTI+ P+++ D+ F + I G++ A + + +M AIK++K
Sbjct: 2 NNPDPTIY-PVLDWNDIKFQDV---------IGEGNFGQVLKARIKKDGLRMDAAIKRMK 51
Query: 239 QVDNSLLNIKMRQVRAEIMTAGQI-RHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILN 297
+ + R E+ ++ H NI+ LL L E+ +G+LL+ L
Sbjct: 52 EYASK---DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL- 107
Query: 298 DVSQGRRELEWLARHRIARGIVSGLEYLHMYH-------------RPRIIHRNITPSSVL 344
+ R LE IA S L + H + + IHR++ ++L
Sbjct: 108 ---RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL 164
Query: 345 IDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+ ++ A+IADFGL+R V ++ V ++A E ++ D++S+GVLL
Sbjct: 165 VGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 221
Query: 405 AVLV-MGKLP 413
+V +G P
Sbjct: 222 WEIVSLGGTP 231
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDV------SQGRRELE 307
A +M H +V LL + + L+V E M +G L L + + GR
Sbjct: 71 ASVMKGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
++A I G+ YL+ + +HRN+ + ++ D +I DFG+ R + +
Sbjct: 129 LQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY 185
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
V ++APE + F+ D++SFGV+L
Sbjct: 186 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDV------SQGRRELE 307
A +M H +V LL + + L+V E M +G L L + + GR
Sbjct: 72 ASVMKGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 129
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
++A I G+ YL+ + +HRN+ + ++ D +I DFG+ R + +
Sbjct: 130 LQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY 186
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
V ++APE + F+ D++SFGV+L
Sbjct: 187 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 321 GLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVG 379
G++YL +HR++ +VL+ A+I+DFGL++ L D + + + V
Sbjct: 481 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 537
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLL 404
+ APE KFS K D++SFGVL+
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLM 562
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-S 284
+ + +A+K +K+ + + R + +E+ I H N+V LL +P L+V
Sbjct: 55 ATXRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 285 EFMKNGSLLEIL----------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRII 334
EF K G+L L D+ + LE L + + G+E+L + I
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ--VAKGMEFLASR---KXI 166
Query: 335 HRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEK 394
HR++ ++L+ + +I DFGLAR + V + ++APE ++ +
Sbjct: 167 HRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 226
Query: 395 CDIYSFGVLL-AVLVMGKLP 413
D++SFGVLL + +G P
Sbjct: 227 SDVWSFGVLLWEIFSLGASP 246
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 321 GLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR-LMPDGHAQVSTSIVAGTVG 379
G++YL +HR++ +VL+ A+I+DFGL++ L D + + + V
Sbjct: 482 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 538
Query: 380 YIAPEYHQTLKFSEKCDIYSFGVLL 404
+ APE KFS K D++SFGVL+
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLM 563
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 22/194 (11%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-SEFMKNGSLLE 294
VK + + + R + +E+ I H N+V LL +P L+V +EF K G+L
Sbjct: 53 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLST 112
Query: 295 IL--------------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
L D+ + LE L + + G+E+L + IHR++
Sbjct: 113 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASR---KCIHRDLAA 167
Query: 341 SSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L+ + +I DFGLAR + V + ++APE ++ + D++SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 401 GVLL-AVLVMGKLP 413
GVLL + +G P
Sbjct: 228 GVLLWEIFSLGASP 241
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDV------SQGRRELE 307
A +M H +V LL + + L+V E M +G L L + + GR
Sbjct: 68 ASVMKGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 125
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
++A I G+ YL+ + +HR++ + ++ D +I DFG+ R + +
Sbjct: 126 LQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 182
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
V ++APE + F+ D++SFGV+L
Sbjct: 183 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 219
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPS 341
+V E++ G + L + R E AR A+ IV EYLH +I+R++ P
Sbjct: 118 MVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPE 170
Query: 342 SVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFG 401
++LID ++ DFG A+ + T + GT +APE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALG 225
Query: 402 VLLAVLVMGKLP 413
VL+ + G P
Sbjct: 226 VLIYEMAAGYPP 237
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDV------SQGRRELE 307
A +M H +V LL + + L+V E M +G L L + + GR
Sbjct: 71 ASVMKGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
++A I G+ YL+ + +HR++ + ++ D +I DFG+ R + +
Sbjct: 129 LQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 185
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
V ++APE + F+ D++SFGV+L
Sbjct: 186 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-S 284
+ + +A+K +K+ + + R + +E+ I H N+V LL +P L+V
Sbjct: 55 ATXRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 285 EFMKNGSLLEIL----------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRII 334
EF K G+L L D+ + LE L + + G+E+L + I
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ--VAKGMEFLASR---KXI 166
Query: 335 HRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEK 394
HR++ ++L+ + +I DFGLAR + V + ++APE ++ +
Sbjct: 167 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 226
Query: 395 CDIYSFGVLL-AVLVMGKLP 413
D++SFGVLL + +G P
Sbjct: 227 SDVWSFGVLLWEIFSLGASP 246
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 22/194 (11%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-SEFMKNGSLLE 294
VK + + + R + +E+ I H N+V LL +P L+V +EF K G+L
Sbjct: 53 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLST 112
Query: 295 IL--------------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
L D+ + LE L + + G+E+L + IHR++
Sbjct: 113 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASR---KCIHRDLAA 167
Query: 341 SSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L+ + +I DFGLAR + V + ++APE ++ + D++SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 401 GVLL-AVLVMGKLP 413
GVLL + +G P
Sbjct: 228 GVLLWEIFSLGASP 241
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDV------SQGRRELE 307
A +M H +V LL + + L+V E M +G L L + + GR
Sbjct: 71 ASVMKGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
++A I G+ YL+ + +HR++ + ++ D +I DFG+ R + +
Sbjct: 129 LQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 185
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
V ++APE + F+ D++SFGV+L
Sbjct: 186 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-S 284
+ + +A+K +K+ + + R + +E+ I H N+V LL +P L+V
Sbjct: 56 ATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 112
Query: 285 EFMKNGSLLEIL-------------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRP 331
EF K G+L L D+ + LE L + + G+E+L
Sbjct: 113 EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASR--- 167
Query: 332 RIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKF 391
+ IHR++ ++L+ + +I DFGLAR + V + ++APE +
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 227
Query: 392 SEKCDIYSFGVLL-AVLVMGKLP 413
+ + D++SFGVLL + +G P
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-S 284
+ + +A+K +K+ + + R + +E+ I H N+V LL +P L+V
Sbjct: 55 ATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 285 EFMKNGSLLEIL--------------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
EF K G+L L D+ + LE L + + G+E+L
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASR-- 167
Query: 331 PRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK 390
+ IHR++ ++L+ + +I DFGLAR + V + ++APE
Sbjct: 168 -KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 391 FSEKCDIYSFGVLL-AVLVMGKLP 413
++ + D++SFGVLL + +G P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Query: 282 LVSEFMKNGSLLEILNDVSQGRRE----LEWLARHRIARGIVSGLEYLHMYHRPRIIHRN 337
LV++ M G LL+ + + ++GR L W + I G+ YL R++HR+
Sbjct: 95 LVTQLMPYGCLLDHVRE-NRGRLGSQDLLNWCMQ------IAKGMSYLEDV---RLVHRD 144
Query: 338 ITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDI 397
+ +VL+ +I DFGLARL+ + + ++A E +F+ + D+
Sbjct: 145 LAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDV 204
Query: 398 YSFGVLL-AVLVMGKLPSD 415
+S+GV + ++ G P D
Sbjct: 205 WSYGVTVWELMTFGAKPYD 223
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-S 284
+ + +A+K +K+ + + R + +E+ I H N+V LL +P L+V
Sbjct: 57 ATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 113
Query: 285 EFMKNGSLLEIL----NDVSQGRRELEWLAR------HRIARG--IVSGLEYLHMYHRPR 332
EF K G+L L N+ + E L + H I + G+E+L +
Sbjct: 114 EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---K 170
Query: 333 IIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFS 392
IHR++ ++L+ + +I DFGLAR + V + ++APE ++
Sbjct: 171 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 230
Query: 393 EKCDIYSFGVLL-AVLVMGKLP 413
+ D++SFGVLL + +G P
Sbjct: 231 IQSDVWSFGVLLWEIFSLGASP 252
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 32/243 (13%)
Query: 217 GEIYIAELPESN----GKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLA 272
G++Y A+ E++ K+I K +++++ ++ EI H NIV LL
Sbjct: 24 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV---------EIDILASCDHPNIVKLLD 74
Query: 273 HMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPR 332
+ ++ EF G++ ++ ++ + L +I L+ L+ H +
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERP------LTESQIQVVCKQTLDALNYLHDNK 128
Query: 333 IIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEY-----HQ 387
IIHR++ ++L D + ++ADFG++ Q S + GT ++APE +
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-GTPYWMAPEVVMCETSK 187
Query: 388 TLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKL 447
+ K D++S G+ L + + P E + +R + + SE P A S+
Sbjct: 188 DRPYDYKADVWSLGITLIEMAEIEPPH-------HELNPMRVLLKIAKSEPPTLAQPSRW 240
Query: 448 LGN 450
N
Sbjct: 241 SSN 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 22/194 (11%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-SEFMKNGSLLE 294
VK + + + R + +E+ I H N+V LL +P L+V EF K G+L
Sbjct: 53 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 112
Query: 295 IL--------------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
L D+ + LE L + + G+E+L + IHR++
Sbjct: 113 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASR---KCIHRDLAA 167
Query: 341 SSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L+ + +I DFGLAR + V + ++APE ++ + D++SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 401 GVLL-AVLVMGKLP 413
GVLL + +G P
Sbjct: 228 GVLLWEIFSLGASP 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-S 284
+ + +A+K +K+ + + R + +E+ I H N+V LL +P L+V
Sbjct: 55 ATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 285 EFMKNGSLLEIL--------------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
EF K G+L L D+ + LE L + + G+E+L
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASR-- 167
Query: 331 PRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK 390
+ IHR++ ++L+ + +I DFGLAR + V + ++APE
Sbjct: 168 -KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 391 FSEKCDIYSFGVLL-AVLVMGKLP 413
++ + D++SFGVLL + +G P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 34/194 (17%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIV-SGLEY 324
++ LL RPD +L+ E M+ ++ L D R L+ +AR LE
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEP---VQDLFDFITERGALQ----EELARSFFWQVLEA 126
Query: 325 LHMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAP 383
+ H ++HR+I ++LID + E ++ DFG L+ D V T GT Y P
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPP 182
Query: 384 EYHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSL 426
E+ + ++ + ++S G+LL +V G +P F+H EE + L
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSECQHL 238
Query: 427 VRWMRNVMTSENPN 440
+RW + S+ P
Sbjct: 239 IRWCLALRPSDRPT 252
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 227 SNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-S 284
+ + +A+K +K+ + + R + +E+ I H N+V LL +P L+V
Sbjct: 55 ATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 285 EFMKNGSLLEIL--------------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHR 330
EF K G+L L D+ + LE L + + G+E+L
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASR-- 167
Query: 331 PRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLK 390
+ IHR++ ++L+ + +I DFGLAR + V + ++APE
Sbjct: 168 -KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 226
Query: 391 FSEKCDIYSFGVLL-AVLVMGKLP 413
++ + D++SFGVLL + +G P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 38/208 (18%)
Query: 229 GKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIR-HRNIVPLLAHMVRPDCH---LLVS 284
G+++A+KK+ D + ++ EIM ++ H NIV LL +++R D LV
Sbjct: 34 GEVVAVKKI--FDAFQNSTDAQRTFREIMILTELSGHENIVNLL-NVLRADNDRDVYLVF 90
Query: 285 EFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
++M+ I ++ LE + + + ++ ++YLH ++HR++ PS++L
Sbjct: 91 DYMETDLHAVIRANI------LEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNIL 141
Query: 345 IDDDMEARIADFGLARL----------MP----------DGHAQVSTSIVAGTVGYIAPE 384
++ + ++ADFGL+R +P D + T VA T Y APE
Sbjct: 142 LNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVA-TRWYRAPE 200
Query: 385 -YHQTLKFSEKCDIYSFGVLLAVLVMGK 411
+ K+++ D++S G +L ++ GK
Sbjct: 201 ILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 264 HRNIVPLLAHMVRP-----DCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIAR-- 316
H NI+ L+A+ +R + LL+ F K G+L N++ + + + +L +I
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLP-FFKRGTLW---NEIERLKDKGNFLTEDQILWLL 140
Query: 317 -GIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFG---LARLMPDGHAQVST- 371
GI GLE +H HR++ P+++L+ D+ + + D G A + +G Q T
Sbjct: 141 LGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTL 197
Query: 372 ---SIVAGTVGYIAPEYHQTLKFS---EKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKS 425
+ T+ Y APE E+ D++S G +L ++ G+ P D FQ + +
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA 257
Query: 426 LV 427
L
Sbjct: 258 LA 259
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDV------SQGRRELE 307
A +M H +V LL + + L+V E M +G L L + + GR
Sbjct: 71 ASVMKGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
++A I G+ YL+ + +HR++ + ++ D +I DFG+ R + +
Sbjct: 129 LQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 185
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
V ++APE + F+ D++SFGV+L
Sbjct: 186 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 22/194 (11%)
Query: 237 VKQVDNSLLNIKMRQVRAEIMTAGQIRHR-NIVPLLAHMVRPDCHLLV-SEFMKNGSLLE 294
VK + + + R + +E+ I H N+V LL +P L+V EF K G+L
Sbjct: 99 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 158
Query: 295 IL--------------NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITP 340
L D+ + LE L + + G+E+L + IHR++
Sbjct: 159 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASR---KCIHRDLAA 213
Query: 341 SSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSF 400
++L+ + +I DFGLAR + V + ++APE ++ + D++SF
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 401 GVLL-AVLVMGKLP 413
GVLL + +G P
Sbjct: 274 GVLLWEIFSLGASP 287
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDV------SQGRRELE 307
A +M H +V LL + + L+V E M +G L L + + GR
Sbjct: 70 ASVMKGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 127
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
++A I G+ YL+ + +HR++ + ++ D +I DFG+ R + +
Sbjct: 128 LQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 184
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
V ++APE + F+ D++SFGV+L
Sbjct: 185 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 221
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 254 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDV------SQGRRELE 307
A +M H +V LL + + L+V E M +G L L + + GR
Sbjct: 71 ASVMKGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 308 WLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHA 367
++A I G+ YL+ + +HR++ + ++ D +I DFG+ R + +
Sbjct: 129 LQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY 185
Query: 368 QVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
V ++APE + F+ D++SFGV+L
Sbjct: 186 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 33/212 (15%)
Query: 294 EILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARI 353
E L D GR +E R + E + H ++HR++ PS++ D ++
Sbjct: 100 ENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV 159
Query: 354 ADFGLARLMPDGHAQ--VSTSIVA-----GTVG---YIAPEYHQTLKFSEKCDIYSFGVL 403
DFGL M + V T + A G VG Y++PE +S K DI+S G++
Sbjct: 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLI 219
Query: 404 LAVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIA 463
L L+ + + + VR + +V + P L Y + ++V +
Sbjct: 220 LFELL---------YPFSTQMERVRTLTDVRNLKFP------PLFTQKYPCEYVMVQDML 264
Query: 464 CFCTLDDPEERPNSKDVRSMLSDTALIKDVDF 495
P ERP + ++ + A+ +D+DF
Sbjct: 265 S----PSPMERPEAINI----IENAVFEDLDF 288
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 32/200 (16%)
Query: 230 KMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPL--------------LAHMV 275
K +AIKK+ D + +R EI ++ H NIV + + +
Sbjct: 37 KRVAIKKIVLTDPQSVKHALR----EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92
Query: 276 RPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIH 335
+ +V E+M+ ++ N + QG LE AR + + ++ GL+Y+H ++H
Sbjct: 93 ELNSVYIVQEYMET----DLANVLEQGPL-LEEHARLFMYQ-LLRGLKYIH---SANVLH 143
Query: 336 RNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVG--YIAPEYHQTL-KF 391
R++ P+++ I+ +D+ +I DFGLAR+M D H + G V Y +P + +
Sbjct: 144 RDLKPANLFINTEDLVLKIGDFGLARIM-DPHYSHKGHLSEGLVTKWYRSPRLLLSPNNY 202
Query: 392 SEKCDIYSFGVLLAVLVMGK 411
++ D+++ G + A ++ GK
Sbjct: 203 TKAIDMWAAGCIFAEMLTGK 222
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGT 377
+ G+E+L + IHR++ ++L+ ++ +I DFGLAR + V
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 378 VGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTS 436
+ ++APE +S K D++S+GVLL + +G P + ++ +R M
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP---YPGVQMDEDFCSRLREGMRM 321
Query: 437 ENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSD 486
P + + +I C DP+ERP ++ L D
Sbjct: 322 RAPEYSTPE-------------IYQIMLDCWHRDPKERPRFAELVEKLGD 358
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 33/218 (15%)
Query: 215 ASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
+ G +Y+A ++ K +AIKKV ++ L++ K ++ EI +++ I+ L +
Sbjct: 38 SYGYVYLA-YDKNTEKNVAIKKVNRMFEDLIDCK--RILREITILNRLKSDYII-RLYDL 93
Query: 275 VRPDCHLLVSEFMKNGSLLEILN-DVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+ PD L E +LEI + D+ + + +L I + + L + H I
Sbjct: 94 IIPDDLLKFDELY---IVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGI 150
Query: 334 IHRNITPSSVLIDDDMEARIADFGLARLM-----------------PDGH-----AQVST 371
IHR++ P++ L++ D ++ DFGLAR + P H Q+++
Sbjct: 151 IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTS 210
Query: 372 SIVAGTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLV 408
+V T Y APE + +++ DI+S G + A L+
Sbjct: 211 HVV--TRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 114/266 (42%), Gaps = 43/266 (16%)
Query: 199 LEKEDCSASLEKIRSRASGEIYIAELPESN----GKMIAIKKVKQVDNSLLNIKMRQVRA 254
L ED + ++ A G++Y A+ E++ K+I K +++++ ++
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--------- 83
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRI 314
EI H NIV LL + ++ EF G++ ++ ++ + L +I
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------LTESQI 137
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSI- 373
L+ L+ H +IIHR++ ++L D + ++ADFG++ A+ + +I
Sbjct: 138 QVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRTIQ 190
Query: 374 ----VAGTVGYIAPEY-----HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEK 424
GT ++APE + + K D++S G+ L + + P E
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH-------HEL 243
Query: 425 SLVRWMRNVMTSENPNRAIDSKLLGN 450
+ +R + + SE P A S+ N
Sbjct: 244 NPMRVLLKIAKSEPPTLAQPSRWSSN 269
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 33/261 (12%)
Query: 199 LEKEDCSASLEKIRSRASGEIYIAELPESN----GKMIAIKKVKQVDNSLLNIKMRQVRA 254
L ED + ++ A G++Y A+ E++ K+I K +++++ ++
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--------- 83
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRI 314
EI H NIV LL + ++ EF G++ ++ ++ + L +I
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------LTESQI 137
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
L+ L+ H +IIHR++ ++L D + ++ADFG++ + + I
Sbjct: 138 QVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI- 196
Query: 375 AGTVGYIAPEY-----HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRW 429
GT ++APE + + K D++S G+ L + + P E + +R
Sbjct: 197 -GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH-------HELNPMRV 248
Query: 430 MRNVMTSENPNRAIDSKLLGN 450
+ + SE P A S+ N
Sbjct: 249 LLKIAKSEPPTLAQPSRWSSN 269
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 110/262 (41%), Gaps = 30/262 (11%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 43 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 99
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + ++
Sbjct: 100 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 156
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL- 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 157 AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 216
Query: 405 AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIAC 464
+ + + P +Q + ++R++ + P+ D ++L++
Sbjct: 217 EIATLAEQP----YQGLSNEQVLRFVMEGGLLDKPDNCPD-------------MLLELMR 259
Query: 465 FCTLDDPEERPNSKDVRSMLSD 486
C +P+ RP+ ++ S + +
Sbjct: 260 MCWQYNPKMRPSFLEIISSIKE 281
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 110/261 (42%), Gaps = 33/261 (12%)
Query: 199 LEKEDCSASLEKIRSRASGEIYIAELPESN----GKMIAIKKVKQVDNSLLNIKMRQVRA 254
L ED + ++ A G++Y A+ E++ K+I K +++++ ++
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--------- 83
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRI 314
EI H NIV LL + ++ EF G++ ++ ++ + L +I
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------LTESQI 137
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
L+ L+ H +IIHR++ ++L D + ++ADFG++ +
Sbjct: 138 QVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDXF 195
Query: 375 AGTVGYIAPEY-----HQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLVRW 429
GT ++APE + + K D++S G+ L + + P E + +R
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH-------HELNPMRV 248
Query: 430 MRNVMTSENPNRAIDSKLLGN 450
+ + SE P A S+ N
Sbjct: 249 LLKIAKSEPPTLAQPSRWSSN 269
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 37/277 (13%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
GE+Y G+ I A+K K+ D +L N + A IM + H +IV L+ +
Sbjct: 26 GEVYEGVYTNHKGEKINVAVKTCKK-DCTLDNKEKFMSEAVIMK--NLDHPHIVKLIG-I 81
Query: 275 VRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRII 334
+ + ++ E G L L + + L+ L + I + YL + +
Sbjct: 82 IEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLESIN---CV 135
Query: 335 HRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEK 394
HR+I ++L+ ++ DFGL+R + D S+ + +++PE +F+
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 395 CDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRN---VMTSENPNRAIDSKLLGN 450
D++ F V + +L GK P FF W+ N + E +R L
Sbjct: 195 SDVWMFAVCMWEILSFGKQP---FF----------WLENKDVIGVLEKGDRLPKPDLC-- 239
Query: 451 GYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSDT 487
+L L C+ DP +RP ++ LSD
Sbjct: 240 ---PPVLYTLMTRCWDY--DPSDRPRFTELVCSLSDV 271
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 32/173 (18%)
Query: 318 IVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQ--VSTSIVA 375
I +E+LH ++HR++ PS++ D ++ DFGL M + V T + A
Sbjct: 173 IAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 376 --------GTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSLV 427
GT Y++PE +S K DI+S G++L L+ + + + V
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---------YSFSTQMERV 280
Query: 428 RWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIACFCTLDDPEERPNSKDV 480
R + +V + P L Y ++ ++V + P ERP + D+
Sbjct: 281 RIITDVRNLKFP------LLFTQKYPQEHMMVQDMLS----PSPTERPEATDI 323
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 37/277 (13%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
GE+Y G+ I A+K K+ D +L N + A IM + H +IV L+ +
Sbjct: 22 GEVYEGVYTNHKGEKINVAVKTCKK-DCTLDNKEKFMSEAVIMK--NLDHPHIVKLIG-I 77
Query: 275 VRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRII 334
+ + ++ E G L L + + L+ L + I + YL + +
Sbjct: 78 IEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLESIN---CV 131
Query: 335 HRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEK 394
HR+I ++L+ ++ DFGL+R + D S+ + +++PE +F+
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 395 CDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRN---VMTSENPNRAIDSKLLGN 450
D++ F V + +L GK P FF W+ N + E +R L
Sbjct: 191 SDVWMFAVCMWEILSFGKQP---FF----------WLENKDVIGVLEKGDRLPKPDLC-- 235
Query: 451 GYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSDT 487
+L L C+ DP +RP ++ LSD
Sbjct: 236 ---PPVLYTLMTRCWDY--DPSDRPRFTELVCSLSDV 267
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 52 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 108
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + ++
Sbjct: 109 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 165
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 166 AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 224
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 73 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 126
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 182
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSECQHLI 238
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 239 RWCLALRPSDRPT 251
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 37/277 (13%)
Query: 217 GEIYIAELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
GE+Y G+ I A+K K+ D +L N + A IM + H +IV L+ +
Sbjct: 38 GEVYEGVYTNHKGEKINVAVKTCKK-DCTLDNKEKFMSEAVIMK--NLDHPHIVKLIG-I 93
Query: 275 VRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRII 334
+ + ++ E G L L + + L+ L + I + YL + +
Sbjct: 94 IEEEPTWIIMELYPYGELGHYLE---RNKNSLKVLTLVLYSLQICKAMAYLESIN---CV 147
Query: 335 HRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEK 394
HR+I ++L+ ++ DFGL+R + D S+ + +++PE +F+
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 395 CDIYSFGVLL-AVLVMGKLPSDDFFQHTEEKSLVRWMRN---VMTSENPNRAIDSKLLGN 450
D++ F V + +L GK P FF W+ N + E +R L
Sbjct: 207 SDVWMFAVCMWEILSFGKQP---FF----------WLENKDVIGVLEKGDRLPKPDLC-- 251
Query: 451 GYEEQMLLVLKIACFCTLDDPEERPNSKDVRSMLSDT 487
+L L C+ DP +RP ++ LSD
Sbjct: 252 ---PPVLYTLMTRCWDY--DPSDRPRFTELVCSLSDV 283
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 70 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 123
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 179
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSXECQHLI 235
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 236 RWCLALRPSDRPT 248
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 75 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 128
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 184
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSECQHLI 240
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 241 RWCLALRPSDRPT 253
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 75 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 128
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 184
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSECQHLI 240
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 241 RWCLALRPSDRPT 253
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 75 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 128
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 184
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSECQHLI 240
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 241 RWCLALRPSDRPT 253
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 74 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 127
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 183
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSECQHLI 239
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 240 RWCLALRPSDRPT 252
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 90 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 143
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 199
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSECQHLI 255
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 256 RWCLALRPSDRPT 268
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 255 EIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRI 314
E+ ++H NIV L + LV E++ + L + L+D + H +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGN------IINMHNV 102
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
+ L L HR +++HR++ P ++LI++ E ++ADFGLAR +V
Sbjct: 103 KLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV 162
Query: 375 AGTVGYIAPE-YHQTLKFSEKCDIYSFGVLLAVLVMGK 411
T+ Y P+ + +S + D++ G + + G+
Sbjct: 163 --TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 24/164 (14%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L KI GE++ A G+ +A+KKV ++N + +R EI ++H N+
Sbjct: 23 LAKIGQGTFGEVFKAR-HRKTGQKVALKKV-LMENEKEGFPITALR-EIKILQLLKHENV 79
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH-----------RIAR 316
V L+ C S + + + + ++ D + +L L + R+ +
Sbjct: 80 VNLIEI-----CRTKASPYNRCKASIYLVFDFCE--HDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 317 GIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR 360
+++GL Y+H R +I+HR++ ++VLI D ++ADFGLAR
Sbjct: 133 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 70 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 123
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 179
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSECQHLI 235
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 236 RWCLALRPSDRPT 248
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 70 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 123
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 179
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIGGQVFFRQRVSSECQHLI 235
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 236 RWCLALRPSDRPT 248
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 89 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 142
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 198
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSECQHLI 254
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 255 RWCLALRPSDRPT 267
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 90 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 143
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 199
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSXECQHLI 255
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 256 RWCLALRPSDRPT 268
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 117 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 170
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 226
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSECQHLI 282
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 283 RWCLALRPSDRPT 295
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 58 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 114
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + ++
Sbjct: 115 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 97 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 150
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 206
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSXECQHLI 262
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 263 RWCLALRPSDRPT 275
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 102 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 155
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 211
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIGGQVFFRQRVSSECQHLI 267
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 268 RWCLALRPSDRPT 280
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 103 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 156
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 212
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIGGQVFFRQRVSXECQHLI 268
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 269 RWCLALRPSDRPT 281
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 89 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 142
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 198
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSXECQHLI 254
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 255 RWCLALRPSDRPT 267
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 117 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 170
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 226
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSECQHLI 282
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 283 RWCLALRPSDRPT 295
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 102 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 155
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 211
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIGGQVFFRQRVSXECQHLI 267
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 268 RWCLALRPSDRPT 280
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 103 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 156
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 212
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIGGQVFFRQRVSSECQHLI 268
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 269 RWCLALRPSDRPT 281
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 103 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 156
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 212
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIGGQVFFRQRVSSECQHLI 268
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 269 RWCLALRPSDRPT 281
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 26/137 (18%)
Query: 322 LEYLHMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
LE + H ++HR+I ++LID + E ++ DFG L+ D V T GT Y
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVY 207
Query: 381 IAPEYHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE---------------- 423
PE+ + ++ + ++S G+LL +V G +P F+H EE
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSEC 263
Query: 424 KSLVRWMRNVMTSENPN 440
+ L+RW + S+ P
Sbjct: 264 QHLIRWCLALRPSDRPT 280
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 103 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 156
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 212
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIGGQVFFRQRVSXECQHLI 268
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 269 RWCLALRPSDRPT 281
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 102 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 155
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 211
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIGGQVFFRQRVSSECQHLI 267
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 268 RWCLALRPSDRPT 280
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 48 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 104
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + ++
Sbjct: 105 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 161
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 162 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 220
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L KI GE++ A G+ +A+KKV ++N + +R EI ++H N+
Sbjct: 23 LAKIGQGTFGEVFKAR-HRKTGQKVALKKV-LMENEKEGFPITALR-EIKILQLLKHENV 79
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH-----------RIAR 316
V L+ C S + + + ++ D + +L L + R+ +
Sbjct: 80 VNLIE-----ICRTKASPYNRCKGSIYLVFDFCE--HDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 317 GIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR 360
+++GL Y+H R +I+HR++ ++VLI D ++ADFGLAR
Sbjct: 133 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 117 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 170
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 226
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE----------------KSLV 427
+ + ++ + ++S G+LL +V G +P F+H EE + L+
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSXECQHLI 282
Query: 428 RWMRNVMTSENPN 440
RW + S+ P
Sbjct: 283 RWCLALRPSDRPT 295
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 26/137 (18%)
Query: 322 LEYLHMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
LE + H ++HR+I ++LID + E ++ DFG L+ D V T GT Y
Sbjct: 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVY 214
Query: 381 IAPEYHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE---------------- 423
PE+ + ++ + ++S G+LL +V G +P F+H EE
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSSEC 270
Query: 424 KSLVRWMRNVMTSENPN 440
+ L+RW + S+ P
Sbjct: 271 QHLIRWCLALRPSDRPT 287
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L KI GE++ A G+ +A+KKV ++N + +R EI ++H N+
Sbjct: 23 LAKIGQGTFGEVFKAR-HRKTGQKVALKKV-LMENEKEGFPITALR-EIKILQLLKHENV 79
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH-----------RIAR 316
V L+ C S + + + ++ D + +L L + R+ +
Sbjct: 80 VNLIEI-----CRTKASPYNRCKGSIYLVFDFCE--HDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 317 GIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR 360
+++GL Y+H R +I+HR++ ++VLI D ++ADFGLAR
Sbjct: 133 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 26/137 (18%)
Query: 322 LEYLHMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGY 380
LE + H ++HR+I ++LID + E ++ DFG L+ D V T GT Y
Sbjct: 172 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVY 227
Query: 381 IAPEYHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE---------------- 423
PE+ + ++ + ++S G+LL +V G +P F+H EE
Sbjct: 228 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQRVSXEC 283
Query: 424 KSLVRWMRNVMTSENPN 440
+ L+RW + S+ P
Sbjct: 284 QHLIRWCLALRPSDRPT 300
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 208 LEKIRSRASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNI 267
L KI GE++ A G+ +A+KKV ++N + +R EI ++H N+
Sbjct: 22 LAKIGQGTFGEVFKAR-HRKTGQKVALKKV-LMENEKEGFPITALR-EIKILQLLKHENV 78
Query: 268 VPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARH-----------RIAR 316
V L+ C S + + + ++ D + +L L + R+ +
Sbjct: 79 VNLIE-----ICRTKASPYNRCKGSIYLVFDFCE--HDLAGLLSNVLVKFTLSEIKRVMQ 131
Query: 317 GIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLAR 360
+++GL Y+H R +I+HR++ ++VLI D ++ADFGLAR
Sbjct: 132 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 228 NGKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
G+ + ++++ + N ++ ++ E+ + H NIVP A + + +V+
Sbjct: 51 TGEYVTVRRINLEACSNEMVTF----LQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 106
Query: 286 FMKNGSLLE-ILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
FM GS + I G E LA I +G++ L+Y+H +HR++ S +L
Sbjct: 107 FMAYGSAKDLICTHFMDGMNE---LAIAYILQGVLKALDYIHHM---GYVHRSVKASHIL 160
Query: 345 IDDDMEARIADFGL-ARLMPDGHAQVSTSI------VAGTVGYIAPEY-HQTLK-FSEKC 395
I D + ++ GL + L H Q + + +++PE Q L+ + K
Sbjct: 161 ISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKS 218
Query: 396 DIYSFGVLLAVLVMGKLPSDD 416
DIYS G+ L G +P D
Sbjct: 219 DIYSVGITACELANGHVPFKD 239
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 49 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 105
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + ++
Sbjct: 106 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 162
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 163 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 221
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 58 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 114
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + ++
Sbjct: 115 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 52 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 108
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + ++
Sbjct: 109 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 165
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 166 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 224
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 228 NGKMIAIKKV--KQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSE 285
G+ + ++++ + N ++ ++ E+ + H NIVP A + + +V+
Sbjct: 35 TGEYVTVRRINLEACSNEMVTF----LQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 90
Query: 286 FMKNGSLLE-ILNDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVL 344
FM GS + I G E LA I +G++ L+Y+H +HR++ S +L
Sbjct: 91 FMAYGSAKDLICTHFMDGMNE---LAIAYILQGVLKALDYIHHM---GYVHRSVKASHIL 144
Query: 345 IDDDMEARIADFGL-ARLMPDGHAQVSTSI------VAGTVGYIAPEY-HQTLK-FSEKC 395
I D + ++ GL + L H Q + + +++PE Q L+ + K
Sbjct: 145 ISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKS 202
Query: 396 DIYSFGVLLAVLVMGKLPSDD 416
DIYS G+ L G +P D
Sbjct: 203 DIYSVGITACELANGHVPFKD 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 72 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 127
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 128 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 178
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 179 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 238
Query: 408 VMGKLPSD 415
G P D
Sbjct: 239 TFGSKPYD 246
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 313 RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM---EARIADFGLARLMPDGHAQV 369
R+ + I+ G+ YLH + I+H ++ P ++L+ + +I DFG++R + GHA
Sbjct: 135 RLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHA-C 188
Query: 370 STSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLLAVLVMGKLP 413
+ GT Y+APE + D+++ G++ +L+ P
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 45 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 101
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + ++
Sbjct: 102 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 158
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 159 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 20/222 (9%)
Query: 201 KEDCSASLEKIRSRASGEIYIA-ELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIM 257
KE ++ + S A G +Y +PE I AIK++++ + N +++ E
Sbjct: 13 KETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN---KEILDEAY 69
Query: 258 TAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL---NDVSQGRRELEWLARHRI 314
+ + ++ LL + L +++ M G LL+ + D + L W +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 125
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
I G+ YL R++HR++ +VL+ +I DFGLA+L+ +
Sbjct: 126 ---IAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 375 AGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVLVMGKLPSD 415
+ ++A E ++ + D++S+GV + ++ G P D
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 20/222 (9%)
Query: 201 KEDCSASLEKIRSRASGEIYIA-ELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIM 257
KE ++ + S A G +Y +PE I AIK++++ + N +++ E
Sbjct: 20 KETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN---KEILDEAY 76
Query: 258 TAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL---NDVSQGRRELEWLARHRI 314
+ + ++ LL + L +++ M G LL+ + D + L W +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 132
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
I G+ YL R++HR++ +VL+ +I DFGLA+L+ +
Sbjct: 133 ---IAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 375 AGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSD 415
+ ++A E ++ + D++S+GV + ++ G P D
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 51 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 107
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + ++
Sbjct: 108 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 164
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 165 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 223
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 51 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 107
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + ++
Sbjct: 108 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 164
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 165 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 41 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 96
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 97 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 147
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 148 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 207
Query: 408 VMGKLPSD 415
G P D
Sbjct: 208 TFGSKPYD 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 57 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 112
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 113 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 163
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 164 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 223
Query: 408 VMGKLPSD 415
G P D
Sbjct: 224 TFGSKPYD 231
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 50 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 105
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 156
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 157 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
Query: 408 VMGKLPSD 415
G P D
Sbjct: 217 TFGSKPYD 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 22/237 (9%)
Query: 188 SPLIEKEDLAFLE--KEDCSASLEKIRSRASGEIYIA-ELPESNGKMI--AIKKVKQVDN 242
SP E + A L KE ++ + S A G +Y +PE I AIK++++ +
Sbjct: 2 SPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 61
Query: 243 SLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL---NDV 299
N +++ E + + ++ LL + L++ + M G LL+ + D
Sbjct: 62 PKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN 117
Query: 300 SQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLA 359
+ L W + I G+ YL R++HR++ +VL+ +I DFGLA
Sbjct: 118 IGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
Query: 360 RLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSD 415
+L+ + + ++A E ++ + D++S+GV + ++ G P D
Sbjct: 169 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 47 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 102
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 153
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
Query: 408 VMGKLPSD 415
G P D
Sbjct: 214 TFGSKPYD 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 49 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 104
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 155
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 156 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
Query: 408 VMGKLPSD 415
G P D
Sbjct: 216 TFGSKPYD 223
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 47 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 102
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 153
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
Query: 408 VMGKLPSD 415
G P D
Sbjct: 214 TFGSKPYD 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 44 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 99
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 100 LLDYVREHKDNIGSQYLLNWCVQ------IAEGMNYLE---DRRLVHRDLAARNVLVKTP 150
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 151 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 210
Query: 408 VMGKLPSD 415
G P D
Sbjct: 211 TFGSKPYD 218
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 54 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 109
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 160
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 161 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
Query: 408 VMGKLPSD 415
G P D
Sbjct: 221 TFGSKPYD 228
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 53 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 108
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 109 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 159
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 160 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 219
Query: 408 VMGKLPSD 415
G P D
Sbjct: 220 TFGSKPYD 227
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 50 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 105
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 156
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 157 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
Query: 408 VMGKLPSD 415
G P D
Sbjct: 217 TFGSKPYD 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 50 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGC 105
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 156
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 157 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
Query: 408 VMGKLPSD 415
G P D
Sbjct: 217 TFGSKPYD 224
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 80 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 136
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + ++
Sbjct: 137 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMV 193
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 194 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 252
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L +++ M G
Sbjct: 47 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGX 102
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 153
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
Query: 408 VMGKLPSD 415
G P D
Sbjct: 214 TFGSKPYD 221
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 109/262 (41%), Gaps = 30/262 (11%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK V + + I+ A +M H +V LL + + L++ E M G
Sbjct: 45 VAIKTVNEAASMRERIEFLN-EASVMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGD 101
Query: 292 LLEILNDVSQGRRELEWLARH------RIARGIVSGLEYLHMYHRPRIIHRNITPSSVLI 345
L L + LA ++A I G+ YL+ + +HR++ + +
Sbjct: 102 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXV 158
Query: 346 DDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL- 404
+D +I DFG+ R + + V +++PE + F+ D++SFGV+L
Sbjct: 159 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 218
Query: 405 AVLVMGKLPSDDFFQHTEEKSLVRWMRNVMTSENPNRAIDSKLLGNGYEEQMLLVLKIAC 464
+ + + P +Q + ++R++ + P+ D ++L++
Sbjct: 219 EIATLAEQP----YQGLSNEQVLRFVMEGGLLDKPDNCPD-------------MLLELMR 261
Query: 465 FCTLDDPEERPNSKDVRSMLSD 486
C +P+ RP+ ++ S + +
Sbjct: 262 MCWQYNPKMRPSFLEIISSIKE 283
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 215 ASGEIYIAELPESNGKMIAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHM 274
+ G +Y+A +N K +AIKKV ++ L++ K ++ EI +++ I+ L +
Sbjct: 40 SYGYVYLAYDKNAN-KNVAIKKVNRMFEDLIDCK--RILREITILNRLKSDYIIRLHDLI 96
Query: 275 VRPDCHLLVSEFMKNGSLLEILN-DVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRI 333
+ D + +F + +LEI + D+ + + +L + + + L H I
Sbjct: 97 IPED----LLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGI 152
Query: 334 IHRNITPSSVLIDDDMEARIADFGLAR 360
IHR++ P++ L++ D +I DFGLAR
Sbjct: 153 IHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 266 NIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYL 325
++ LL RPD +L+ E + + ++ + +++ E LAR + LE +
Sbjct: 90 GVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV----LEAV 143
Query: 326 HMYHRPRIIHRNITPSSVLID-DDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPE 384
H ++HR+I ++LID + E ++ DFG L+ D V T GT Y PE
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDF-DGTRVYSPPE 199
Query: 385 YHQTLKFSEK-CDIYSFGVLLAVLVMGKLPSDDFFQHTEE 423
+ + ++ + ++S G+LL +V G +P F+H EE
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDEE 235
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 282 LVSEFMKNGSLLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNI 338
L+++ M G LL+ + D + L W + I G+ YL R++HR++
Sbjct: 127 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDL 177
Query: 339 TPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIY 398
+VL+ +I DFGLA+L+ + + ++A E ++ + D++
Sbjct: 178 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 237
Query: 399 SFGVLL-AVLVMGKLPSD 415
S+GV + ++ G P D
Sbjct: 238 SYGVTVWELMTFGSKPYD 255
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 20/222 (9%)
Query: 201 KEDCSASLEKIRSRASGEIYIA-ELPESNGKMI--AIKKVKQVDNSLLNIKMRQVRAEIM 257
KE ++ + S A G +Y +PE I AIK++++ + N +++ E
Sbjct: 20 KETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN---KEILDEAY 76
Query: 258 TAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEIL---NDVSQGRRELEWLARHRI 314
+ + ++ LL + L++ + M G LL+ + D + L W +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 132
Query: 315 ARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDMEARIADFGLARLMPDGHAQVSTSIV 374
I G+ YL R++HR++ +VL+ +I DFGLA+L+ +
Sbjct: 133 ---IAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 375 AGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVLVMGKLPSD 415
+ ++A E ++ + D++S+GV + ++ G P D
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L++ + M G
Sbjct: 48 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGC 103
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 104 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 154
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 155 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 214
Query: 408 VMGKLPSD 415
G P D
Sbjct: 215 TFGSKPYD 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L++ + M G
Sbjct: 50 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGC 105
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 156
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGVLL-AVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 157 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
Query: 408 VMGKLPSD 415
G P D
Sbjct: 217 TFGSKPYD 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L++ + M G
Sbjct: 47 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGC 102
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 153
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
Query: 408 VMGKLPSD 415
G P D
Sbjct: 214 TFGSKPYD 221
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 309 LARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM-EARIADFGLARLMPDGHA 367
L + I I L+ L H I+HR++ P +V+ID ++ + R+ D+GLA H
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY---HP 178
Query: 368 QVSTSIVAGTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
++ + + PE L+ + D++S G + A ++ K P F+ H L
Sbjct: 179 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQL 236
Query: 427 VR 428
V+
Sbjct: 237 VK 238
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 232 IAIKKVKQVDNSLLNIKMRQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGS 291
+AIK++++ + N +++ E + + ++ LL + L++ + M G
Sbjct: 49 VAIKELREATSPKAN---KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGC 104
Query: 292 LLEIL---NDVSQGRRELEWLARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDD 348
LL+ + D + L W + I G+ YL R++HR++ +VL+
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLE---DRRLVHRDLAARNVLVKTP 155
Query: 349 MEARIADFGLARLMPDGHAQVSTSIVAGTVGYIAPEYHQTLKFSEKCDIYSFGV-LLAVL 407
+I DFGLA+L+ + + ++A E ++ + D++S+GV + ++
Sbjct: 156 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
Query: 408 VMGKLPSD 415
G P D
Sbjct: 216 TFGSKPYD 223
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 309 LARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM-EARIADFGLARLMPDGHA 367
L + I I L+ L H I+HR++ P +V+ID ++ + R+ D+GLA H
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY---HP 178
Query: 368 QVSTSIVAGTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
++ + + PE L+ + D++S G + A ++ K P F+ H L
Sbjct: 179 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQL 236
Query: 427 VR 428
V+
Sbjct: 237 VK 238
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 309 LARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM-EARIADFGLARLMPDGHA 367
L + I I L+ L H I+HR++ P +V+ID ++ + R+ D+GLA H
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY---HP 178
Query: 368 QVSTSIVAGTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
++ + + PE L+ + D++S G + A ++ K P F+ H L
Sbjct: 179 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQL 236
Query: 427 VR 428
V+
Sbjct: 237 VK 238
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 309 LARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM-EARIADFGLARLMPDGHA 367
L + I I L+ L H I+HR++ P +V+ID ++ + R+ D+GLA H
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY---HP 178
Query: 368 QVSTSIVAGTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
++ + + PE L+ + D++S G + A ++ K P F+ H L
Sbjct: 179 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQL 236
Query: 427 VR 428
V+
Sbjct: 237 VK 238
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 309 LARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM-EARIADFGLARLMPDGHA 367
L + I I L+ L H I+HR++ P +V+ID ++ + R+ D+GLA H
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY---HP 178
Query: 368 QVSTSIVAGTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
++ + + PE L+ + D++S G + A ++ K P F+ H L
Sbjct: 179 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQL 236
Query: 427 VR 428
V+
Sbjct: 237 VK 238
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 309 LARHRIARGIVSGLEYLHMYHRPRIIHRNITPSSVLIDDDM-EARIADFGLARLMPDGHA 367
L + I I L+ L H I+HR++ P +V+ID ++ + R+ D+GLA H
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY---HP 180
Query: 368 QVSTSIVAGTVGYIAPEYHQTLK-FSEKCDIYSFGVLLAVLVMGKLPSDDFFQHTEEKSL 426
++ + + PE L+ + D++S G + A ++ K P F+ H L
Sbjct: 181 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQL 238
Query: 427 VR 428
V+
Sbjct: 239 VK 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,371,148
Number of Sequences: 62578
Number of extensions: 624928
Number of successful extensions: 3383
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 1618
Number of HSP's gapped (non-prelim): 1121
length of query: 531
length of database: 14,973,337
effective HSP length: 103
effective length of query: 428
effective length of database: 8,527,803
effective search space: 3649899684
effective search space used: 3649899684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)