Your job contains 1 sequence.
>009597
MFWMFVWDFSLKLGMDLLQNYADEKEGDLDEPANQNYGSLNSSALESPDSSPPRLLPSKS
AAPNVDDTTLALTVAQARQTQSRPIDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQG
MRNHKLGFVEDASIDSFVFDEQYNTFYKYGYAADPAGNNYVGDFEALEKNNGVSVYNIRQ
NEQKKRKLEKKQEAEEVDGTAVDVDPAEFNNPATDTWLMKNRKSPWAGKKEGVQTELSEE
QKKYAEEYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFL
TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK
EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS
LHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG
EGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009597
(531 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2194589 - symbol:AT1G10580 "AT1G10580" species... 1357 1.2e-138 1
UNIPROTKB|F1NQ45 - symbol:CDC40 "Uncharacterized protein"... 974 5.3e-117 2
MGI|MGI:1918963 - symbol:Cdc40 "cell division cycle 40" s... 971 1.1e-116 2
UNIPROTKB|O60508 - symbol:CDC40 "Pre-mRNA-processing fact... 971 1.1e-116 2
UNIPROTKB|F1MBS9 - symbol:CDC40 "Uncharacterized protein"... 971 1.1e-116 2
UNIPROTKB|E2RSW2 - symbol:CDC40 "Uncharacterized protein"... 971 1.1e-116 2
UNIPROTKB|F1RSY9 - symbol:CDC40 "Uncharacterized protein"... 971 1.1e-116 2
ZFIN|ZDB-GENE-050116-3 - symbol:cdc40 "cell division cycl... 965 6.0e-116 2
DICTYBASE|DDB_G0289501 - symbol:cdc40 "putative RNA splic... 1010 1.4e-114 2
FB|FBgn0038927 - symbol:CG6015 species:7227 "Drosophila m... 905 5.1e-112 3
UNIPROTKB|F1LMQ0 - symbol:Cdc40 "Protein Cdc40" species:1... 971 9.5e-103 2
RGD|1307063 - symbol:Cdc40 "cell division cycle 40" speci... 971 3.2e-102 2
WB|WBGene00018625 - symbol:prp-17 species:6239 "Caenorhab... 770 2.4e-89 2
POMBASE|SPBC6B1.10 - symbol:prp17 "splicing factor Prp17"... 721 2.5e-77 2
GENEDB_PFALCIPARUM|PFL0970w - symbol:PFL0970w "pre-mRNA s... 679 3.0e-77 3
UNIPROTKB|Q8I5L1 - symbol:PFL0970w "Pre-mRNA splicing fac... 679 3.0e-77 3
UNIPROTKB|G4MYQ9 - symbol:MGG_08133 "Pre-mRNA-processing ... 720 1.1e-76 2
ASPGD|ASPL0000032184 - symbol:AN5196 species:162425 "Emer... 645 8.5e-75 2
CGD|CAL0001327 - symbol:orf19.6347 species:5476 "Candida ... 548 6.3e-53 1
SGD|S000002772 - symbol:CDC40 "Pre-mRNA splicing factor" ... 492 5.4e-47 1
TAIR|locus:2172084 - symbol:AT5G54520 "AT5G54520" species... 404 1.1e-37 1
MGI|MGI:3045255 - symbol:Wdr25 "WD repeat domain 25" spec... 336 6.5e-29 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 289 4.1e-25 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 274 2.0e-23 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 268 9.4e-23 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 268 9.4e-23 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 268 9.4e-23 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 268 9.4e-23 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 268 9.4e-23 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 268 9.4e-23 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 262 4.4e-22 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 261 5.7e-22 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 260 7.3e-22 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 259 8.5e-21 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 271 5.5e-20 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 251 1.2e-19 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 249 2.3e-19 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 249 2.4e-19 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 249 2.4e-19 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 237 2.5e-19 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 251 3.1e-19 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 247 4.6e-19 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 249 8.6e-19 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 245 1.2e-18 1
TAIR|locus:2005539 - symbol:PRL1 "AT4G15900" species:3702... 246 3.9e-18 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 246 4.9e-18 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 235 1.2e-17 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 235 2.4e-17 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 235 2.4e-17 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 230 8.2e-17 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 230 1.4e-16 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 227 1.9e-16 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 226 2.1e-16 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 222 2.6e-16 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 227 3.1e-16 1
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 154 3.2e-16 2
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 154 3.2e-16 2
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 221 6.8e-16 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 224 6.9e-16 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 227 8.6e-16 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 222 1.2e-15 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 214 2.4e-15 1
TAIR|locus:2089303 - symbol:AT3G16650 "AT3G16650" species... 217 7.2e-15 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 218 8.7e-15 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 213 2.0e-14 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 207 2.5e-14 1
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 204 5.6e-14 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 207 1.0e-13 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 215 1.0e-13 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 203 1.0e-13 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 206 1.2e-13 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 206 1.2e-13 1
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 205 1.9e-13 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 206 1.9e-13 1
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 203 2.6e-13 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 207 2.7e-13 1
TAIR|locus:2089179 - symbol:AT3G27640 "AT3G27640" species... 155 2.8e-13 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 201 3.1e-13 1
WB|WBGene00010556 - symbol:rack-1 species:6239 "Caenorhab... 197 3.4e-13 1
UNIPROTKB|Q21215 - symbol:rack-1 "Guanine nucleotide-bind... 197 3.4e-13 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 207 3.6e-13 1
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 203 3.8e-13 1
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 216 4.7e-13 2
UNIPROTKB|F1P5E8 - symbol:FBXW11 "Uncharacterized protein... 201 5.3e-13 1
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 202 5.4e-13 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 202 5.4e-13 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 197 5.4e-13 1
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 204 5.8e-13 1
UNIPROTKB|P74598 - symbol:sll1491 "Uncharacterized WD rep... 196 6.3e-13 1
DICTYBASE|DDB_G0292592 - symbol:lst8 "WD40 repeat-contain... 193 6.9e-13 1
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 199 7.4e-13 1
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 200 8.9e-13 1
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 198 9.9e-13 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 196 1.1e-12 1
GENEDB_PFALCIPARUM|PFC0100c - symbol:PFC0100c "regulatory... 199 1.2e-12 1
UNIPROTKB|O97334 - symbol:PFC0100c "Regulatory protein, p... 199 1.2e-12 1
POMBASE|SPBC713.05 - symbol:SPBC713.05 "WD repeat protein... 190 1.4e-12 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 196 1.4e-12 1
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 197 1.4e-12 1
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 198 1.6e-12 1
WARNING: Descriptions of 889 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 1357 (482.7 bits), Expect = 1.2e-138, P = 1.2e-138
Identities = 244/258 (94%), Positives = 250/258 (96%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
GKCMRTYMGH+KAVRDI F NDG+KFLTA YDKNIKYWDTETGQVI TFSTGKIPYVVKL
Sbjct: 316 GKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKL 375
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
NPDDDKQNILLAGMSDKKIVQWD+NT E+TQEYDQHLGAVNTITFVD+NRRFVTSSDDKS
Sbjct: 376 NPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 435
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR 453
LRVWEFGIPVVIKYISEPHMHSMPSIS+HPN NWLAAQSLDNQILIYSTRERFQLNKKKR
Sbjct: 436 LRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKR 495
Query: 454 FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPL 513
FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH GVCIG EWHPL
Sbjct: 496 FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPL 555
Query: 514 EQSKVATCGWDGLIKYWD 531
EQSKVATCGWDGLIKYWD
Sbjct: 556 EQSKVATCGWDGLIKYWD 573
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 158/382 (41%), Positives = 211/382 (55%)
Query: 65 VDDTTLALTVAQARQTQSRPIDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNH 124
VDDT LALTVA Q++S+PIDP+QH + YNPT++QLWAP++GPAHPYAKDGIAQGMRNH
Sbjct: 35 VDDTALALTVANVNQSKSKPIDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNH 94
Query: 125 KLGFVEDASIDSFVFDEQYNTFYKYGYAADPAGNNYVGDFEALEKNNGVSVYNIRXXXXX 184
KLG VEDASI SF F+EQY+TF+K GYAADP+G NYVGD EA +KN+G+SV+NI
Sbjct: 95 KLGSVEDASIGSFGFEEQYHTFHKCGYAADPSGMNYVGDVEAFKKNDGLSVFNIPQSEQK 154
Query: 185 XXXXXXXXXXXXVDGTAVDVDPAEFNNPATDTWLMKNRKSPWAGKKEGVQTELSXXXXXX 244
+ +++P E NP T+ WL KNRKSPW+ KKE VQ EL+
Sbjct: 155 RRKIERSKEEREGEEKKEEIEP-EAENPETEAWLRKNRKSPWSRKKEVVQGELTEEQKKY 213
Query: 245 XXXXXXXXXXXXXXXXXXXXHVEDKSTFHGKCMRTYMGHS--KAVRDISFCNDGTKFLTA 302
H DKSTFHGK + Y G S +A +D ND ++
Sbjct: 214 AEDHAKKKEEKGQQGETKGEHYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHC-YIPK 272
Query: 303 SYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILL--AGMSDKKIVQWDM-NT 359
+ + W T V ++ P KQ LL AGM D K+ WD+ N+
Sbjct: 273 ---RLVHTWSGHTKGVS----------AIRFFP---KQGHLLLSAGM-DCKVKIWDVYNS 315
Query: 360 KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI 419
+ + Y H AV I F + +F+T+ DK+++ W+ VI S + + +
Sbjct: 316 GKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYV--V 373
Query: 420 SLHPNT---NWLAAQSLDNQIL 438
L+P+ N L A D +I+
Sbjct: 374 KLNPDDDKQNILLAGMSDKKIV 395
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 974 (347.9 bits), Expect = 5.3e-117, Sum P(2) = 5.3e-117
Identities = 171/257 (66%), Positives = 208/257 (80%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C+RT++GH KAVRDI F N GT+FL+A+YD+ IK WDTETGQ I F+ K+PY VK N
Sbjct: 324 RCLRTFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTETGQCISRFTNRKVPYCVKFN 383
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSL
Sbjct: 384 PDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSL 443
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
RVWE+ IPV KYI+EP MHSMP+++L PN WLA QS+DNQILI+ + RF+LNKKK F
Sbjct: 444 RVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIF 503
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH+VAGYACQV+FSPD +V+SGD +GK WDWK+ K++ +K H+ VCIG WHP E
Sbjct: 504 KGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHPHE 563
Query: 515 QSKVATCGWDGLIKYWD 531
SKV TCGWDGLIK WD
Sbjct: 564 TSKVITCGWDGLIKLWD 580
Score = 199 (75.1 bits), Expect = 5.3e-117, Sum P(2) = 5.3e-117
Identities = 40/98 (40%), Positives = 60/98 (61%)
Query: 85 IDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYN 144
+DP+ + YNPTYE ++AP +GP +P+ +A RN G+ E A I+ F+F++Q
Sbjct: 73 LDPAIKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 131
Query: 145 TFYKYGYAADPAGNN------YVGDFEALEKNNGVSVY 176
TF YGYA DP+ +N Y+G E EKN G++V+
Sbjct: 132 TFVTYGYALDPSIDNPEVATKYIGSVEEAEKNQGLTVF 169
Score = 81 (33.6 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 52/232 (22%), Positives = 91/232 (39%)
Query: 267 EDKSTFHGKCMRTYMGHS--KAVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRTF 322
E+K+ H K M Y G S +D+ T Y K I W T V
Sbjct: 237 EEKTILHVKEMYDYQGRSYLHVPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVS--- 293
Query: 323 STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDS 381
V+L P ++LL+ D KI W++ + + + H AV I F ++
Sbjct: 294 -------AVRLFPLSG--HMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNNA 344
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP-SISLHPNT---NWLAAQSLDNQI 437
RF++++ D+ +++W+ I + +P + +P+ N A D +I
Sbjct: 345 GTRFLSAAYDRYIKLWDTETGQCISRFTN---RKVPYCVKFNPDEDKQNLFVAGMSDKKI 401
Query: 438 LIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG-KCWFWD 488
+ + R + + R G + V + RFV + D + + W WD
Sbjct: 402 VQWDIRSGEIVQEYDRHLGAVNT----IVFVDENRRFVSTSDDKSLRVWEWD 449
Score = 76 (31.8 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 34/138 (24%), Positives = 65/138 (47%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYV 330
G+ ++ Y H AV I F ++ +F++ S DK+++ W+ + + I S +P
Sbjct: 409 GEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP-A 467
Query: 331 VKLNPDD--------DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN 382
V L+P+ D Q IL+ G ++ + +N K+I + + G + F +
Sbjct: 468 VTLSPNGKWLACQSMDNQ-ILIFGAQNR----FRLNKKKIFKGH-MVAGYACQVDF-SPD 520
Query: 383 RRFVTSSD-DKSLRVWEF 399
+V S D D L +W++
Sbjct: 521 MSYVISGDADGKLNIWDW 538
Score = 38 (18.4 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 512 PLEQSKVATCGWDGLIKYWD 531
PL + +C D IK W+
Sbjct: 299 PLSGHMLLSCSMDCKIKLWE 318
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 971 (346.9 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 171/257 (66%), Positives = 207/257 (80%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C+RT++GHSKAVRDI F GT+FL+A+YD+ +K WDTETGQ I F+ K+PY VK N
Sbjct: 323 RCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFN 382
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSL
Sbjct: 383 PDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSL 442
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
RVWE+ IPV KYI+EP MHSMP+++L PN WLA QS+DNQILI+ + RF+LNKKK F
Sbjct: 443 RVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIF 502
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH+VAGYACQV+FSPD +V+SGDG GK WDWK+ K++ K H+ VCIG WHP E
Sbjct: 503 KGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHE 562
Query: 515 QSKVATCGWDGLIKYWD 531
SKV TCGWDGLIK WD
Sbjct: 563 TSKVITCGWDGLIKLWD 579
Score = 199 (75.1 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 40/98 (40%), Positives = 60/98 (61%)
Query: 85 IDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYN 144
+DP+ + YNPTYE ++AP +GP +P+ +A RN G+ E A I+ F+F++Q
Sbjct: 72 LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 130
Query: 145 TFYKYGYAADPAGNN------YVGDFEALEKNNGVSVY 176
TF YGYA DP+ +N Y+G E EKN G++V+
Sbjct: 131 TFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVF 168
Score = 77 (32.2 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 33/154 (21%), Positives = 66/154 (42%)
Query: 341 NILLAGMSDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
++LL+ D KI W++ + + + H AV I F + +F++++ D+ L++W+
Sbjct: 302 HLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDT 361
Query: 400 GIPVVIKYISEPHMHSMP-SISLHPNT---NWLAAQSLDNQILIYSTRERFQLNKKKRFA 455
I + +P + +P+ N A D +I+ + R + + R
Sbjct: 362 ETGQCISRFTN---RKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHL 418
Query: 456 GHIVAGYACQVNFSPDGRFVMSGDGEG-KCWFWD 488
G + V + RFV + D + + W WD
Sbjct: 419 GAVNT----IVFVDENRRFVSTSDDKSLRVWEWD 448
Score = 71 (30.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 33/138 (23%), Positives = 64/138 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYV 330
G+ ++ Y H AV I F ++ +F++ S DK+++ W+ + + I S +P
Sbjct: 408 GEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP-A 466
Query: 331 VKLNPDD--------DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN 382
V L+P+ D Q IL+ G ++ + +N K+I + + G + F +
Sbjct: 467 VTLSPNGKWLACQSMDNQ-ILIFGAQNR----FRLNKKKIFKGH-MVAGYACQVDF-SPD 519
Query: 383 RRFVTSSDDKS-LRVWEF 399
+V S D L +W++
Sbjct: 520 MSYVISGDGNGKLNIWDW 537
Score = 71 (30.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 34/171 (19%), Positives = 62/171 (36%)
Query: 275 KCMRTYMGHSKAVRDIS-FCNDGTKFLTASYDKNIKYWDTETGQ-VIRTF-STGKIPYVV 331
K + + GH+K V + F G L+ S D IK W+ + +RTF K +
Sbjct: 279 KQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDI 338
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLG--AVNTITFVDSNRRFVTSS 389
N + L+ D+ + WD T + + V D FV
Sbjct: 339 CFNTAGTQ---FLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGM 395
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
DK + W+ +++ H+ ++ +I + S D + ++
Sbjct: 396 SDKKIVQWDIRSGEIVQEYDR-HLGAVNTIVFVDENRRFVSTSDDKSLRVW 445
Score = 37 (18.1 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 512 PLEQSKVATCGWDGLIKYWD 531
PL + +C D IK W+
Sbjct: 298 PLSGHLLLSCSMDCKIKLWE 317
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 971 (346.9 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 171/257 (66%), Positives = 207/257 (80%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C+RT++GHSKAVRDI F GT+FL+A+YD+ +K WDTETGQ I F+ K+PY VK N
Sbjct: 323 RCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFN 382
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSL
Sbjct: 383 PDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSL 442
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
RVWE+ IPV KYI+EP MHSMP+++L PN WLA QS+DNQILI+ + RF+LNKKK F
Sbjct: 443 RVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIF 502
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH+VAGYACQV+FSPD +V+SGDG GK WDWK+ K++ K H+ VCIG WHP E
Sbjct: 503 KGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHE 562
Query: 515 QSKVATCGWDGLIKYWD 531
SKV TCGWDGLIK WD
Sbjct: 563 TSKVITCGWDGLIKLWD 579
Score = 199 (75.1 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 40/98 (40%), Positives = 60/98 (61%)
Query: 85 IDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYN 144
+DP+ + YNPTYE ++AP +GP +P+ +A RN G+ E A I+ F+F++Q
Sbjct: 72 LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 130
Query: 145 TFYKYGYAADPAGNN------YVGDFEALEKNNGVSVY 176
TF YGYA DP+ +N Y+G E EKN G++V+
Sbjct: 131 TFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVF 168
Score = 79 (32.9 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 52/232 (22%), Positives = 90/232 (38%)
Query: 267 EDKSTFHGKCMRTYMGHS--KAVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRTF 322
E+K+ H K M Y G S +D+ T Y K I W T V
Sbjct: 236 EEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVS--- 292
Query: 323 STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDS 381
V+L P ++LL+ D KI W++ + + + H AV I F +
Sbjct: 293 -------AVRLFPLSG--HLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTA 343
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP-SISLHPNT---NWLAAQSLDNQI 437
+F++++ D+ L++W+ I + +P + +P+ N A D +I
Sbjct: 344 GTQFLSAAYDRYLKLWDTETGQCISRFTN---RKVPYCVKFNPDEDKQNLFVAGMSDKKI 400
Query: 438 LIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG-KCWFWD 488
+ + R + + R G + V + RFV + D + + W WD
Sbjct: 401 VQWDIRSGEIVQEYDRHLGAVNT----IVFVDENRRFVSTSDDKSLRVWEWD 448
Score = 71 (30.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 33/138 (23%), Positives = 64/138 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYV 330
G+ ++ Y H AV I F ++ +F++ S DK+++ W+ + + I S +P
Sbjct: 408 GEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP-A 466
Query: 331 VKLNPDD--------DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN 382
V L+P+ D Q IL+ G ++ + +N K+I + + G + F +
Sbjct: 467 VTLSPNGKWLACQSMDNQ-ILIFGAQNR----FRLNKKKIFKGH-MVAGYACQVDF-SPD 519
Query: 383 RRFVTSSDDKS-LRVWEF 399
+V S D L +W++
Sbjct: 520 MSYVISGDGNGKLNIWDW 537
Score = 37 (18.1 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 512 PLEQSKVATCGWDGLIKYWD 531
PL + +C D IK W+
Sbjct: 298 PLSGHLLLSCSMDCKIKLWE 317
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 971 (346.9 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 171/257 (66%), Positives = 207/257 (80%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C+RT++GHSKAVRDI F GT+FL+A+YD+ +K WDTETGQ I F+ K+PY VK N
Sbjct: 323 RCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFN 382
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSL
Sbjct: 383 PDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSL 442
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
RVWE+ IPV KYI+EP MHSMP+++L PN WLA QS+DNQILI+ + RF+LNKKK F
Sbjct: 443 RVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIF 502
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH+VAGYACQV+FSPD +V+SGDG GK WDWK+ K++ K H+ VCIG WHP E
Sbjct: 503 KGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHE 562
Query: 515 QSKVATCGWDGLIKYWD 531
SKV TCGWDGLIK WD
Sbjct: 563 TSKVITCGWDGLIKLWD 579
Score = 199 (75.1 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 40/98 (40%), Positives = 60/98 (61%)
Query: 85 IDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYN 144
+DP+ + YNPTYE ++AP +GP +P+ +A RN G+ E A I+ F+F++Q
Sbjct: 72 LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 130
Query: 145 TFYKYGYAADPAGNN------YVGDFEALEKNNGVSVY 176
TF YGYA DP+ +N Y+G E EKN G++V+
Sbjct: 131 TFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVF 168
Score = 78 (32.5 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 52/232 (22%), Positives = 90/232 (38%)
Query: 267 EDKSTFHGKCMRTYMGHS--KAVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRTF 322
E+K+ H K M Y G S +D+ T Y K I W T V
Sbjct: 236 EEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVS--- 292
Query: 323 STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDS 381
V+L P ++LL+ D KI W++ + + + H AV I F +
Sbjct: 293 -------AVRLFPLSG--HLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTA 343
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP-SISLHPNT---NWLAAQSLDNQI 437
+F++++ D+ L++W+ I + +P + +P+ N A D +I
Sbjct: 344 GTQFLSAAYDRYLKLWDTETGQCISRFTN---RKVPYCVKFNPDEDKQNLFVAGMSDKKI 400
Query: 438 LIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG-KCWFWD 488
+ + R + + R G + V + RFV + D + + W WD
Sbjct: 401 VQWDIRSGEIVQEYDRHLGAVNT----IVFVDENRRFVSTSDDKSLRVWEWD 448
Score = 71 (30.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 33/138 (23%), Positives = 64/138 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYV 330
G+ ++ Y H AV I F ++ +F++ S DK+++ W+ + + I S +P
Sbjct: 408 GEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP-A 466
Query: 331 VKLNPDD--------DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN 382
V L+P+ D Q IL+ G ++ + +N K+I + + G + F +
Sbjct: 467 VTLSPNGKWLACQSMDNQ-ILIFGAQNR----FRLNKKKIFKGH-MVAGYACQVDF-SPD 519
Query: 383 RRFVTSSDDKS-LRVWEF 399
+V S D L +W++
Sbjct: 520 MSYVISGDGNGKLNIWDW 537
Score = 37 (18.1 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 512 PLEQSKVATCGWDGLIKYWD 531
PL + +C D IK W+
Sbjct: 298 PLSGHLLLSCSMDCKIKLWE 317
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 971 (346.9 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 171/257 (66%), Positives = 207/257 (80%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C+RT++GHSKAVRDI F GT+FL+A+YD+ +K WDTETGQ I F+ K+PY VK N
Sbjct: 407 RCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFN 466
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSL
Sbjct: 467 PDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSL 526
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
RVWE+ IPV KYI+EP MHSMP+++L PN WLA QS+DNQILI+ + RF+LNKKK F
Sbjct: 527 RVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIF 586
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH+VAGYACQV+FSPD +V+SGDG GK WDWK+ K++ K H+ VCIG WHP E
Sbjct: 587 KGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHE 646
Query: 515 QSKVATCGWDGLIKYWD 531
SKV TCGWDGLIK WD
Sbjct: 647 TSKVITCGWDGLIKLWD 663
Score = 199 (75.1 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 40/98 (40%), Positives = 60/98 (61%)
Query: 85 IDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYN 144
+DP+ + YNPTYE ++AP +GP +P+ +A RN G+ E A I+ F+F++Q
Sbjct: 156 LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 214
Query: 145 TFYKYGYAADPAGNN------YVGDFEALEKNNGVSVY 176
TF YGYA DP+ +N Y+G E EKN G++V+
Sbjct: 215 TFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVF 252
Score = 78 (32.5 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 52/232 (22%), Positives = 90/232 (38%)
Query: 267 EDKSTFHGKCMRTYMGHS--KAVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRTF 322
E+K+ H K M Y G S +D+ T Y K I W T V
Sbjct: 320 EEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVS--- 376
Query: 323 STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDS 381
V+L P ++LL+ D KI W++ + + + H AV I F +
Sbjct: 377 -------AVRLFPLSG--HLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTA 427
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP-SISLHPNT---NWLAAQSLDNQI 437
+F++++ D+ L++W+ I + +P + +P+ N A D +I
Sbjct: 428 GTQFLSAAYDRYLKLWDTETGQCISRFTN---RKVPYCVKFNPDEDKQNLFVAGMSDKKI 484
Query: 438 LIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG-KCWFWD 488
+ + R + + R G + V + RFV + D + + W WD
Sbjct: 485 VQWDIRSGEIVQEYDRHLGAVNT----IVFVDENRRFVSTSDDKSLRVWEWD 532
Score = 71 (30.1 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 33/138 (23%), Positives = 64/138 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYV 330
G+ ++ Y H AV I F ++ +F++ S DK+++ W+ + + I S +P
Sbjct: 492 GEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP-A 550
Query: 331 VKLNPDD--------DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN 382
V L+P+ D Q IL+ G ++ + +N K+I + + G + F +
Sbjct: 551 VTLSPNGKWLACQSMDNQ-ILIFGAQNR----FRLNKKKIFKGH-MVAGYACQVDF-SPD 603
Query: 383 RRFVTSSDDKS-LRVWEF 399
+V S D L +W++
Sbjct: 604 MSYVISGDGNGKLNIWDW 621
Score = 37 (18.1 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 512 PLEQSKVATCGWDGLIKYWD 531
PL + +C D IK W+
Sbjct: 382 PLSGHLLLSCSMDCKIKLWE 401
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 971 (346.9 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 171/257 (66%), Positives = 207/257 (80%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C+RT++GHSKAVRDI F GT+FL+A+YD+ +K WDTETGQ I F+ K+PY VK N
Sbjct: 323 RCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFN 382
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSL
Sbjct: 383 PDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSL 442
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
RVWE+ IPV KYI+EP MHSMP+++L PN WLA QS+DNQILI+ + RF+LNKKK F
Sbjct: 443 RVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIF 502
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH+VAGYACQV+FSPD +V+SGDG GK WDWK+ K++ K H+ VCIG WHP E
Sbjct: 503 KGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHE 562
Query: 515 QSKVATCGWDGLIKYWD 531
SKV TCGWDGLIK WD
Sbjct: 563 TSKVITCGWDGLIKLWD 579
Score = 199 (75.1 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 40/98 (40%), Positives = 60/98 (61%)
Query: 85 IDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYN 144
+DP+ + YNPTYE ++AP +GP +P+ +A RN G+ E A I+ F+F++Q
Sbjct: 72 LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 130
Query: 145 TFYKYGYAADPAGNN------YVGDFEALEKNNGVSVY 176
TF YGYA DP+ +N Y+G E EKN G++V+
Sbjct: 131 TFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVF 168
Score = 78 (32.5 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 52/232 (22%), Positives = 90/232 (38%)
Query: 267 EDKSTFHGKCMRTYMGHS--KAVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRTF 322
E+K+ H K M Y G S +D+ T Y K I W T V
Sbjct: 236 EEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVS--- 292
Query: 323 STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDS 381
V+L P ++LL+ D KI W++ + + + H AV I F +
Sbjct: 293 -------AVRLFPLSG--HLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTA 343
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP-SISLHPNT---NWLAAQSLDNQI 437
+F++++ D+ L++W+ I + +P + +P+ N A D +I
Sbjct: 344 GTQFLSAAYDRYLKLWDTETGQCISRFTN---RKVPYCVKFNPDEDKQNLFVAGMSDKKI 400
Query: 438 LIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG-KCWFWD 488
+ + R + + R G + V + RFV + D + + W WD
Sbjct: 401 VQWDIRSGEIVQEYDRHLGAVNT----IVFVDENRRFVSTSDDKSLRVWEWD 448
Score = 71 (30.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 33/138 (23%), Positives = 64/138 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYV 330
G+ ++ Y H AV I F ++ +F++ S DK+++ W+ + + I S +P
Sbjct: 408 GEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP-A 466
Query: 331 VKLNPDD--------DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN 382
V L+P+ D Q IL+ G ++ + +N K+I + + G + F +
Sbjct: 467 VTLSPNGKWLACQSMDNQ-ILIFGAQNR----FRLNKKKIFKGH-MVAGYACQVDF-SPD 519
Query: 383 RRFVTSSDDKS-LRVWEF 399
+V S D L +W++
Sbjct: 520 MSYVISGDGNGKLNIWDW 537
Score = 37 (18.1 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 512 PLEQSKVATCGWDGLIKYWD 531
PL + +C D IK W+
Sbjct: 298 PLSGHLLLSCSMDCKIKLWE 317
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 965 (344.8 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
Identities = 168/257 (65%), Positives = 208/257 (80%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C+RT++GHSKAVRD+ F N GT+FL+A+YD+ IK WD+ETGQ I F+ K+PY VK N
Sbjct: 322 RCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISRFTNRKVPYCVKFN 381
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD+DKQN+L+AGMSDKKIVQWD+ + E+ QEYD+HLGAVNTITFVD NRRFV++SDDKSL
Sbjct: 382 PDEDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSL 441
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
RVWE+ IP KYI+EP MHSMP+++L PN WLA QS+DNQILI+ + RF+LNKKK F
Sbjct: 442 RVWEWDIPADFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIF 501
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH+VAGYACQV+FSPD +V+SGD +GK WDWK+ K++ +K H+ VCI WHP E
Sbjct: 502 KGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKVCISALWHPHE 561
Query: 515 QSKVATCGWDGLIKYWD 531
SKV TCGWDG IK WD
Sbjct: 562 TSKVITCGWDGQIKLWD 578
Score = 198 (74.8 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
Identities = 38/99 (38%), Positives = 61/99 (61%)
Query: 85 IDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYN 144
+DP+ ++YNPTYE ++AP +GP +P+ +A RN G+ E A ++ F+F++Q
Sbjct: 70 LDPALKEVSYNPTYETMFAPEFGPMNPFRSQQMA-APRNMLSGYAEPAHVNDFMFEQQRR 128
Query: 145 TFYKYGYAADPA-------GNNYVGDFEALEKNNGVSVY 176
TF +GYA DP+ N+Y+G E EKN G++V+
Sbjct: 129 TFSTFGYALDPSVDTSQASSNSYIGAIEEAEKNKGLTVF 167
Score = 94 (38.1 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
Identities = 35/155 (22%), Positives = 71/155 (45%)
Query: 341 NILLAGMSDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
++LL+ D KI W++ N + + + H AV + F +S +F++++ D+ +++W+
Sbjct: 301 HLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDS 360
Query: 400 GIPVVIKYISEPHMHSMP-SISLHPNT---NWLAAQSLDNQILIYSTRERFQLNKKKRFA 455
I + +P + +P+ N L A D +I+ + R + + R
Sbjct: 361 ETGQCISRFTN---RKVPYCVKFNPDEDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDR-- 415
Query: 456 GHIVAGYACQVNFSPDGR-FVMSGDGEG-KCWFWD 488
H+ G + F + R FV + D + + W WD
Sbjct: 416 -HL--GAVNTITFVDENRRFVSTSDDKSLRVWEWD 447
Score = 87 (35.7 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 39/179 (21%), Positives = 66/179 (36%)
Query: 266 VEDKSTFHGKCMRTYMGHSKAVRDIS-FCNDGTKFLTASYDKNIKYWDT-ETGQVIRTFS 323
+ DK K + + GH+K V I F G L+ S D IK W+ + +RTF
Sbjct: 269 IPDKCYLPKKQLHVWTGHTKGVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCVRTF- 327
Query: 324 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLG--AVNTITFVDS 381
G V + ++ L A D+ I WD T + + V D
Sbjct: 328 IGHSKAVRDVCFNNSGTQFLSAAY-DRYIKLWDSETGQCISRFTNRKVPYCVKFNPDEDK 386
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
V DK + W+ V++ H+ ++ +I+ + S D + ++
Sbjct: 387 QNLLVAGMSDKKIVQWDIRSGEVVQEYDR-HLGAVNTITFVDENRRFVSTSDDKSLRVW 444
Score = 85 (35.0 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 43/180 (23%), Positives = 82/180 (45%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYV 330
G+ ++ Y H AV I+F ++ +F++ S DK+++ W+ + + I S +P
Sbjct: 407 GEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPADFKYIAEPSMHSMP-A 465
Query: 331 VKLNPDD--------DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN 382
V L+P+ D Q IL+ G ++ + +N K+I + + G + F +
Sbjct: 466 VTLSPNGKWLACQSMDNQ-ILIFGAQNR----FRLNKKKIFKGH-MVAGYACQVDF-SPD 518
Query: 383 RRFVTSSD-DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN-TNWLAAQSLDNQILIY 440
+V S D D L +W++ + I + H S HP+ T+ + D QI ++
Sbjct: 519 MSYVVSGDADGKLNIWDWKTTKLYHRI-KAHDKVCISALWHPHETSKVITCGWDGQIKLW 577
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 1010 (360.6 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 172/257 (66%), Positives = 210/257 (81%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C++TYMGHS+AVRDI F NDG +FL+ YD+ + WDTETG+++ +F+ GKIPY +K N
Sbjct: 339 RCIQTYMGHSQAVRDICFSNDGRRFLSCGYDRQTRLWDTETGKILSSFTNGKIPYCIKFN 398
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PDDDKQ L G SDKKI+QWD+ + +I QEYDQHLGAVNTITF+D NRRFVTSSDDKSL
Sbjct: 399 PDDDKQEQFLCGGSDKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSL 458
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
RVW++GIPVVIKYIS+P MHSMP+++LHP W AAQSLDNQILIYS R+RF++NKKKRF
Sbjct: 459 RVWDWGIPVVIKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNKKKRF 518
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH V+GYACQ+ FSPDG+F+ SGD GK +FWDWK+ K+ +T+ H VCIG EW PLE
Sbjct: 519 LGHNVSGYACQLGFSPDGKFIYSGDSTGKAFFWDWKTSKIIKTINAHNNVCIGIEWAPLE 578
Query: 515 QSKVATCGWDGLIKYWD 531
SKVATC W+ IK WD
Sbjct: 579 PSKVATCSWNNEIKLWD 595
Score = 140 (54.3 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 43/175 (24%), Positives = 76/175 (43%)
Query: 15 MDLLQNYADEKEGDLDEP-ANQNYGSLNSSALEXXXXXXXXXXXXXXXXXNVDDTTLALT 73
MDLL Y D E +L N N + ++ N +++ +T
Sbjct: 1 MDLLTAYDDSDEEELTNTNTNTNTNTTTTTTTTTTTTTETTPTINNNNNNNNNNSNKTIT 60
Query: 74 ----------VAQARQTQSRPIDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDG--IAQGM 121
V R +++ I+P+ + YNPT E L I+GP P++ + +
Sbjct: 61 SFKPSNLAPIVTSIRVVENK-INPNDKILLYNPTVESLEGDIFGPKKPFSSNDKKLDPKF 119
Query: 122 RNHKLGFVEDASIDSFVFDEQYNTFYKYGYAADPAGNN-YVG----DFEALEKNN 171
+NH G VED I+ + F++Q +F GY+ +P + ++G + + +KNN
Sbjct: 120 KNHTNGLVEDYHINDYAFNQQVLSFKTNGYSENPNNSTEFIGHRKDENDHTKKNN 174
Score = 110 (43.8 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 60/233 (25%), Positives = 94/233 (40%)
Query: 266 VEDKSTFHGKCMRTYMGHS--KAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS 323
+ + S FHGK + YMG S D+ T F+ N Y TG T
Sbjct: 257 LSNTSIFHGKSKKDYMGRSWVDPPSDLRLVTPDT-FVPKKLIHN--Y----TGH---TKG 306
Query: 324 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDSN 382
I Y+ K +L AGM D + WD + Q Y H AV I F +
Sbjct: 307 VAAIRYIPKYG-----HLLLSAGM-DNTVKIWDAYGDRRCIQTYMGHSQAVRDICFSNDG 360
Query: 383 RRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP-SISLHPNTN----WLAAQSLDNQI 437
RRF++ D+ R+W+ ++ + +P I +P+ + +L S D +I
Sbjct: 361 RRFLSCGYDRQTRLWDTETGKILSSFTNG---KIPYCIKFNPDDDKQEQFLCGGS-DKKI 416
Query: 438 LIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR-FVMSGDGEGKCWFWDW 489
+ + + Q+ ++ + H+ G + F D R FV S D + WDW
Sbjct: 417 IQWDIKSN-QIVQE--YDQHL--GAVNTITFLDDNRRFVTSSDDKS-LRVWDW 463
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 905 (323.6 bits), Expect = 5.1e-112, Sum P(3) = 5.1e-112
Identities = 150/257 (58%), Positives = 207/257 (80%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C+RT+ GH +A++DI++ N GT FL+ASYD+ IK WD ETG V+ F+T K+P+ VK +
Sbjct: 320 RCIRTFSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFH 379
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD+ KQ++ +AG SDKKI+ WD + +I QEYD+HLG+V+TITFVD NRRFVT+SDDKS+
Sbjct: 380 PDNSKQHLFVAGTSDKKIICWDTRSGDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSM 439
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
R+WE+ IPV +KYI++P MHSMP+++L PN W+A QSLDN+I+I+S RF++N+KK F
Sbjct: 440 RIWEWDIPVDMKYIADPTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTF 499
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH+V+GYACQ++FSPD +++SGDG+GKC+ WDWK+ K+++ + H+GVCI WHP E
Sbjct: 500 TGHMVSGYACQLDFSPDMSYLVSGDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHPHE 559
Query: 515 QSKVATCGWDGLIKYWD 531
SKV T GWDG IKYWD
Sbjct: 560 ASKVVTAGWDGQIKYWD 576
Score = 193 (73.0 bits), Expect = 5.1e-112, Sum P(3) = 5.1e-112
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 83 RPIDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQ 142
R +DP+ + YNP YE+++AP+ GP HP + RN G+VE A I++F F+ Q
Sbjct: 68 RTLDPTLKEVTYNPRYEEMYAPVKGPEHPDLTMQ-QRAPRNTLAGYVEKAHINAFEFENQ 126
Query: 143 YNTFYKYGYAADPA------GNNYVGDFEALEKNNGVSVY 176
TF+ YGYA DP+ G ++VGD ++ +NG +V+
Sbjct: 127 RRTFHTYGYALDPSVDDQADGQSFVGDLQSAYDDNGKTVF 166
Score = 109 (43.4 bits), Expect = 4.4e-19, Sum P(3) = 4.4e-19
Identities = 34/155 (21%), Positives = 71/155 (45%)
Query: 341 NILLAGMSDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
++LL+G D ++ W++ + + + H A+ I + + F+++S D+ +++W+
Sbjct: 299 HLLLSGSMDCRVKLWEVYGERRCIRTFSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDA 358
Query: 400 GIPVVIKYISEPHMHSMP-SISLHPNTN---WLAAQSLDNQILIYSTRERFQLNKKKRFA 455
V+ + MP + HP+ + A + D +I+ + TR + + R
Sbjct: 359 ETGDVVSRFTT---RKMPFCVKFHPDNSKQHLFVAGTSDKKIICWDTRSGDIVQEYDR-- 413
Query: 456 GHIVAGYACQVNFSPDGR-FVMSGDGEG-KCWFWD 488
H+ G + F D R FV + D + + W WD
Sbjct: 414 -HL--GSVSTITFVDDNRRFVTTSDDKSMRIWEWD 445
Score = 73 (30.8 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD 312
T G ++ Y H +V I+F +D +F+T S DK+++ W+
Sbjct: 402 TRSGDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWE 443
Score = 42 (19.8 bits), Expect = 5.1e-112, Sum P(3) = 5.1e-112
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 210 NNPATDTWLMKNRKSPWAGKKEGVQT 235
N P T +L K W+G +G+ +
Sbjct: 265 NAPPTKCFLPKAHIHTWSGHNKGISS 290
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 971 (346.9 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 171/257 (66%), Positives = 207/257 (80%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C+RT++GHSKAVRDI F GT+FL+A+YD+ +K WDTETGQ I F+ K+PY VK N
Sbjct: 191 RCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFN 250
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSL
Sbjct: 251 PDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSL 310
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
RVWE+ IPV KYI+EP MHSMP+++L PN WLA QS+DNQILI+ + RF+LNKKK F
Sbjct: 311 RVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIF 370
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH+VAGYACQV+FSPD +V+SGDG GK WDWK+ K++ K H+ VCIG WHP E
Sbjct: 371 KGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHE 430
Query: 515 QSKVATCGWDGLIKYWD 531
SKV TCGWDGLIK WD
Sbjct: 431 TSKVITCGWDGLIKLWD 447
Score = 67 (28.6 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 147 YKYGYAADPAGNN------YVGDFEALEKNNGVSVY 176
+ +GYA DP+ +N Y+G E EKN G++V+
Sbjct: 1 FAFGYALDPSLDNHQVSAKYIGSVEDAEKNQGLTVF 36
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 971 (346.9 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 171/257 (66%), Positives = 207/257 (80%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C+RT++GHSKAVRDI F GT+FL+A+YD+ +K WDTETGQ I F+ K+PY VK N
Sbjct: 188 RCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFN 247
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSL
Sbjct: 248 PDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSL 307
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
RVWE+ IPV KYI+EP MHSMP+++L PN WLA QS+DNQILI+ + RF+LNKKK F
Sbjct: 308 RVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIF 367
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH+VAGYACQV+FSPD +V+SGDG GK WDWK+ K++ K H+ VCIG WHP E
Sbjct: 368 KGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHE 427
Query: 515 QSKVATCGWDGLIKYWD 531
SKV TCGWDGLIK WD
Sbjct: 428 TSKVITCGWDGLIKLWD 444
Score = 62 (26.9 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 150 GYAADPAGNN------YVGDFEALEKNNGVSVY 176
GYA DP+ +N Y+G E EKN G++V+
Sbjct: 1 GYALDPSLDNHQVSAKYIGSVEDAEKNQGLTVF 33
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 770 (276.1 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 129/258 (50%), Positives = 186/258 (72%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+ +RTY GH VR+++F N+GT+FL+AS+D+ +K WDTETGQV + F TG +PY +K +
Sbjct: 310 RVVRTYAGHKLPVREVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRFHTGHVPYCLKYH 369
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PDDDK ++ L GM +KKI+QWD + EI QEYD+HL AVN+ITF D NRRF ++SDDKS+
Sbjct: 370 PDDDKNHMFLVGMQNKKIIQWDSRSGEIVQEYDRHLQAVNSITFFDKNRRFASTSDDKSV 429
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS-TRERFQLNKKKR 453
R+WE+ IPV K I +H++P+++ PN W+ Q +DN+I+++ ++ + +KKK
Sbjct: 430 RIWEWEIPVDTKLIQNVGLHAIPTMTKSPNDKWVVGQCMDNRIVLFQLVDDKLRFSKKKA 489
Query: 454 FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPL 513
F GH AGYAC ++FSPD F++SGD +GK + WDW++ K+ K H+ CI WHP
Sbjct: 490 FRGHNAAGYACNIDFSPDQSFLISGDADGKLFIWDWRTHKIVGKWKAHDSTCIAALWHPH 549
Query: 514 EQSKVATCGWDGLIKYWD 531
E+S++ T GWDGLIK W+
Sbjct: 550 EKSRMITAGWDGLIKMWN 567
Score = 143 (55.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 45/182 (24%), Positives = 83/182 (45%)
Query: 265 HVEDKSTFHGKCMRTYMGHSKAVRDIS-FCNDGTKFLTASYDKNIKYWDTETGQ-VIRTF 322
+V ++ K + TY GH+K V + F FL+ S D IK W+ Q V+RT+
Sbjct: 256 YVPERCFVPKKLVHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTY 315
Query: 323 STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVN-TITFV-- 379
+ K+P V ++ +++ L A D+ + WD T ++ Q + H G V + +
Sbjct: 316 AGHKLP-VREVAFNNEGTEFLSASF-DRYVKLWDTETGQVKQRF--HTGHVPYCLKYHPD 371
Query: 380 -DSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQIL 438
D N F+ +K + W+ +++ H+ ++ SI+ A+ S D +
Sbjct: 372 DDKNHMFLVGMQNKKIIQWDSRSGEIVQEYDR-HLQAVNSITFFDKNRRFASTSDDKSVR 430
Query: 439 IY 440
I+
Sbjct: 431 IW 432
Score = 141 (54.7 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 85 IDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYN 144
+DP I NP ++QL+ P GP + + K + +N GFVE A ++ F F+ Q
Sbjct: 55 VDPKTKEIKSNPKFDQLFKPESGPVNHF-KSEQQRSQKNTLTGFVEPAHLNEFHFNRQIR 113
Query: 145 TFYKYGYAADPAGNN----YVGDFEALEKNNGVSVYNIRXXXXXXXXXXXXXXXXXVDG 199
+F GYA +P + +VGD + E GVS++ + +DG
Sbjct: 114 SFDTLGYAQNPTAESGTTHFVGDVKKAEAEKGVSLFESKKTGGEKRKRVRNDDSADIDG 172
Score = 86 (35.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 32/136 (23%), Positives = 65/136 (47%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYV 330
G+ ++ Y H +AV I+F + +F + S DK+++ W+ E ++I+ IP +
Sbjct: 395 GEIVQEYDRHLQAVNSITFFDKNRRFASTSDDKSVRIWEWEIPVDTKLIQNVGLHAIPTM 454
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT----QEYDQH--LGAVNTITFVDSNRR 384
K +P+D ++ D +IV + + ++ + + H G I F ++
Sbjct: 455 TK-SPND---KWVVGQCMDNRIVLFQLVDDKLRFSKKKAFRGHNAAGYACNIDF-SPDQS 509
Query: 385 FVTSSD-DKSLRVWEF 399
F+ S D D L +W++
Sbjct: 510 FLISGDADGKLFIWDW 525
Score = 78 (32.5 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 30/153 (19%), Positives = 68/153 (44%)
Query: 341 NILLAGMSDKKIVQWDMNTKE-ITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
++ L+ D KI W++ ++ + + Y H V + F + F+++S D+ +++W+
Sbjct: 289 HLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEGTEFLSASFDRYVKLWDT 348
Query: 400 GIPVVIKYISEPHMHSMPSISLHPNT--NWLAAQSLDNQILI-YSTRERFQLNKKKRFAG 456
V + H+ + HP+ N + + N+ +I + +R + + R
Sbjct: 349 ETGQVKQRFHTGHVPYC--LKYHPDDDKNHMFLVGMQNKKIIQWDSRSGEIVQEYDR--- 403
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEG-KCWFWD 488
H+ A + F + RF + D + + W W+
Sbjct: 404 HLQAVNSITF-FDKNRRFASTSDDKSVRIWEWE 435
Score = 70 (29.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 266 VEDKSTFHGKCMRTYMGHSKA--VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS 323
V+DK F K + + GH+ A +I F D + ++ D + WD T +++ +
Sbjct: 478 VDDKLRFSKK--KAFRGHNAAGYACNIDFSPDQSFLISGDADGKLFIWDWRTHKIVGKWK 535
Query: 324 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 356
+ L +K ++ AG D I W+
Sbjct: 536 AHDSTCIAALWHPHEKSRMITAGW-DGLIKMWN 567
Score = 48 (22.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 493 KVFRTLKCH-EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
K+ T + H +GV +W P +C D IK W+
Sbjct: 266 KLVHTYRGHNKGVNF-LQWFPKSAHLFLSCSMDTKIKLWE 304
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 721 (258.9 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 129/262 (49%), Positives = 179/262 (68%)
Query: 272 FHGKCM-RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+H + + RT+ GH++ +RD+SF DG FL+ S+DK IK WDTE G+ + F++ ++
Sbjct: 297 YHDRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNC 356
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
VK D DK N LAG +DK+I+Q+D+ + +I Q YD HLG +N+ITF+++ +RFVT+SD
Sbjct: 357 VKFQVDPDKPNEFLAGTADKRILQFDIRSPDIVQAYDHHLGGINSITFLENGKRFVTTSD 416
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D S+R WE+G PV IK++++ MHSMP ++L PN +A QSLDN I +YS E+++ NK
Sbjct: 417 DSSMRFWEYGTPVPIKFVADIAMHSMPRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNK 476
Query: 451 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
KK F G+ +GY+ +V FSPDGRFV SGD G FWDWK+CK+ L H G +
Sbjct: 477 KKVFKGYSCSGYSLEVGFSPDGRFVFSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAF 536
Query: 511 HPLEQSKVATCGW-DGLIKYWD 531
HP E SKVAT DG IKYWD
Sbjct: 537 HPQETSKVATSSIVDGSIKYWD 558
Score = 98 (39.6 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 38/164 (23%), Positives = 69/164 (42%)
Query: 279 TYMGHSKAVRDISFCN-DGTKFLTASYDKNIKYWDT-ETGQVIRTFSTGKIPYVVKLNPD 336
T+ GH+K + + F G L+ S D IK W+ ++RTF P + L+
Sbjct: 261 TWKGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARP-IRDLSFS 319
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITF-VDSNR--RFVTSSDDKS 393
D ++ L DK I WD + ++ N + F VD ++ F+ + DK
Sbjct: 320 QDGRSFLSTSF-DKTIKLWDTELGKCLNCFNSDR-LTNCVKFQVDPDKPNEFLAGTADKR 377
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQI 437
+ ++ P +++ H+ + SI+ N S D+ +
Sbjct: 378 ILQFDIRSPDIVQAYDH-HLGGINSITFLENGKRFVTTSDDSSM 420
Score = 76 (31.8 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 92 IAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQY--NTFYKY 149
+A N ++ P GPA+P+ ++N G+ E + +FVF+++Y NT Y
Sbjct: 53 LARNVPVNEMVQPALGPANPFVTKE-QDSIKNSITGYAEREYVPNFVFNQEYYANTHAIY 111
Query: 150 G 150
G
Sbjct: 112 G 112
>GENEDB_PFALCIPARUM|PFL0970w [details] [associations]
symbol:PFL0970w "pre-mRNA splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188
KO:K12816 HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 679 (244.1 bits), Expect = 3.0e-77, Sum P(3) = 3.0e-77
Identities = 119/263 (45%), Positives = 172/263 (65%)
Query: 270 STFHGK-CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 328
S + K C+RTY GH K V+D+ F NDG+ FL+ SYD N+ YWDTE G++ ++ K P
Sbjct: 358 SVYKSKSCIRTYKGHFKGVKDVLFDNDGSSFLSCSYDNNVIYWDTEYGKIKGIYNQKKTP 417
Query: 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
Y + LNPDD N L G ++ KI D T I EY++HL A+NTIT ++N++ +++
Sbjct: 418 YCLCLNPDDT--NTFLVGGANNKICHIDFRTGNIELEYNEHLQAINTITLCENNKKLIST 475
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
SDDK + +WE+G+PVV+KYIS+ M S+ S+S+HP+ N+ QS++N I +Y +F+L
Sbjct: 476 SDDKKIFIWEYGLPVVVKYISDASMFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFRL 535
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
KK F GH GY+ V+ S DG++V+SGD G + W+WK F+ +K H+ VCI C
Sbjct: 536 FSKKTFKGHHNIGYSINVSCSNDGKYVISGDSNGGLFIWNWKKMVNFKNIKAHKNVCIDC 595
Query: 509 EWHPLEQSKVATCGWDGLIKYWD 531
WHP + S +AT WDG IK W+
Sbjct: 596 VWHPFKTSMLATASWDGTIKLWE 618
Score = 115 (45.5 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 43/169 (25%), Positives = 73/169 (43%)
Query: 275 KCMRTYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT-ETGQVIRTFSTGKIPYVVK 332
K + TY GH V+ I F G L+AS D +K W ++ IRT+ G V
Sbjct: 320 KEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYK-GHFKGVKD 378
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
+ D+D + L D ++ WD +I Y+Q D F+ +
Sbjct: 379 VLFDNDGSSFLSCSY-DNNVIYWDTEYGKIKGIYNQKKTPYCLCLNPDDTNTFLVGGANN 437
Query: 393 SLRVWEFGIP-VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
+ +F + ++Y +E H+ ++ +I+L N L + S D +I I+
Sbjct: 438 KICHIDFRTGNIELEY-NE-HLQAINTITLCENNKKLISTSDDKKIFIW 484
Score = 86 (35.3 bits), Expect = 3.0e-77, Sum P(3) = 3.0e-77
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 95 NPTYEQLW-APIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYNTFYKYGYAA 153
NP + + P GP+ + + +NH G +E ++ +FD QYN F G A
Sbjct: 90 NPEFHNILNRPQQGPSINEHYNFLKNENKNHYNGSIETTFVNKNIFDYQYNQFNVTGIAE 149
Query: 154 DPAGNNY 160
+PA NY
Sbjct: 150 NPALKNY 156
Score = 44 (20.5 bits), Expect = 3.0e-77, Sum P(3) = 3.0e-77
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 15 MDLLQNYADEKEGDLD 30
MDLL+ Y D E D++
Sbjct: 1 MDLLKGYNDYNESDIE 16
>UNIPROTKB|Q8I5L1 [details] [associations]
symbol:PFL0970w "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188 KO:K12816
HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 679 (244.1 bits), Expect = 3.0e-77, Sum P(3) = 3.0e-77
Identities = 119/263 (45%), Positives = 172/263 (65%)
Query: 270 STFHGK-CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 328
S + K C+RTY GH K V+D+ F NDG+ FL+ SYD N+ YWDTE G++ ++ K P
Sbjct: 358 SVYKSKSCIRTYKGHFKGVKDVLFDNDGSSFLSCSYDNNVIYWDTEYGKIKGIYNQKKTP 417
Query: 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
Y + LNPDD N L G ++ KI D T I EY++HL A+NTIT ++N++ +++
Sbjct: 418 YCLCLNPDDT--NTFLVGGANNKICHIDFRTGNIELEYNEHLQAINTITLCENNKKLIST 475
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
SDDK + +WE+G+PVV+KYIS+ M S+ S+S+HP+ N+ QS++N I +Y +F+L
Sbjct: 476 SDDKKIFIWEYGLPVVVKYISDASMFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFRL 535
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
KK F GH GY+ V+ S DG++V+SGD G + W+WK F+ +K H+ VCI C
Sbjct: 536 FSKKTFKGHHNIGYSINVSCSNDGKYVISGDSNGGLFIWNWKKMVNFKNIKAHKNVCIDC 595
Query: 509 EWHPLEQSKVATCGWDGLIKYWD 531
WHP + S +AT WDG IK W+
Sbjct: 596 VWHPFKTSMLATASWDGTIKLWE 618
Score = 115 (45.5 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 43/169 (25%), Positives = 73/169 (43%)
Query: 275 KCMRTYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT-ETGQVIRTFSTGKIPYVVK 332
K + TY GH V+ I F G L+AS D +K W ++ IRT+ G V
Sbjct: 320 KEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYK-GHFKGVKD 378
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
+ D+D + L D ++ WD +I Y+Q D F+ +
Sbjct: 379 VLFDNDGSSFLSCSY-DNNVIYWDTEYGKIKGIYNQKKTPYCLCLNPDDTNTFLVGGANN 437
Query: 393 SLRVWEFGIP-VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
+ +F + ++Y +E H+ ++ +I+L N L + S D +I I+
Sbjct: 438 KICHIDFRTGNIELEY-NE-HLQAINTITLCENNKKLISTSDDKKIFIW 484
Score = 86 (35.3 bits), Expect = 3.0e-77, Sum P(3) = 3.0e-77
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 95 NPTYEQLW-APIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYNTFYKYGYAA 153
NP + + P GP+ + + +NH G +E ++ +FD QYN F G A
Sbjct: 90 NPEFHNILNRPQQGPSINEHYNFLKNENKNHYNGSIETTFVNKNIFDYQYNQFNVTGIAE 149
Query: 154 DPAGNNY 160
+PA NY
Sbjct: 150 NPALKNY 156
Score = 44 (20.5 bits), Expect = 3.0e-77, Sum P(3) = 3.0e-77
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 15 MDLLQNYADEKEGDLD 30
MDLL+ Y D E D++
Sbjct: 1 MDLLKGYNDYNESDIE 16
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 720 (258.5 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 133/263 (50%), Positives = 184/263 (69%)
Query: 272 FHGK-CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+H + +RTY GHSK++ D +F G KFL+AS+D+ +K WDTETG+ I F+TGK P+V
Sbjct: 281 YHQRELLRTYSGHSKSLSDTTFNTHGDKFLSASFDRMMKLWDTETGKCIAKFTTGKTPHV 340
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNT-KEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
V+ NP + + +AGMSD KIVQ+D E QEYD HLG VNTITF D RRF+T+S
Sbjct: 341 VRFNPTSELGHEFVAGMSDNKIVQFDTRAGNETVQEYDHHLGPVNTITFCDDGRRFMTTS 400
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
DD++LR WE+G V IKYI+EP++ +M + HP+ ++A QS DNQI++YS+ ++F+ N
Sbjct: 401 DDRTLRAWEYGFGVPIKYIAEPYLFAMTRAATHPSGKYVAYQSSDNQIVVYSSNDKFRQN 460
Query: 450 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC- 508
+KK + GH AG A ++ S DG+F+ SGD G FWDWKSCK+F ++ +G + C
Sbjct: 461 RKKSYRGHNNAGSAIDIDISADGQFLASGDTGGYVAFWDWKSCKMFHKIQVEDGQ-VSCV 519
Query: 509 EWHPLEQSKVATCGWDGLIKYWD 531
+WHP E SKVAT G G+IK+WD
Sbjct: 520 KWHPQESSKVATGGASGIIKFWD 542
Score = 118 (46.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 51/233 (21%), Positives = 103/233 (44%)
Query: 267 EDKSTFHGKCMRTYMGHS--KAVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRTF 322
++ +TFHG + Y G + +D+ T +Y K + W T +
Sbjct: 198 DETTTFHGSELHDYQGRTYMHVPQDLDIDLRKEPGSTTNYIPKKMVHQWKHHTKAI---- 253
Query: 323 STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDS 381
LN + ++LL+G +D + WD+ + +E+ + Y H +++ TF
Sbjct: 254 --------TSLNFFPNSGHLLLSGSADSTVKIWDVYHQRELLRTYSGHSKSLSDTTFNTH 305
Query: 382 NRRFVTSSDDKSLRVW--EFGIPVVIKYIS--EPHMHSM-PSISLHPNTNWLAAQSLDNQ 436
+F+++S D+ +++W E G + K+ + PH+ P+ L ++A S DN+
Sbjct: 306 GDKFLSASFDRMMKLWDTETG-KCIAKFTTGKTPHVVRFNPTSEL--GHEFVAGMS-DNK 361
Query: 437 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 489
I+ + TR + ++ + H+ G + F DGR M+ + W++
Sbjct: 362 IVQFDTRAGNETVQE--YDHHL--GPVNTITFCDDGRRFMTTSDDRTLRAWEY 410
Score = 71 (30.1 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 86 DPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIA----QGMRNHKLGFVEDASIDSFVFDE 141
+P+ + Y T E L P +GP++P+ D A Q +N GF E+ + F
Sbjct: 24 EPAHELVQY--TGEDLARPKFGPSNPFRDDSSAASASQKRKNVLTGFAEETFVSEHTFRS 81
Query: 142 QYNTFYKYG 150
++ + G
Sbjct: 82 KHRAVERRG 90
>ASPGD|ASPL0000032184 [details] [associations]
symbol:AN5196 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001305
EnsemblFungi:CADANIAT00003192 OMA:DHHLGPV Uniprot:C8VF70
Length = 531
Score = 645 (232.1 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
Identities = 118/217 (54%), Positives = 156/217 (71%)
Query: 272 FHGK-CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+H + +RT+ GHSKA+ D F G FLTASYD+ +K WDTETGQ I FSTGK P+V
Sbjct: 313 YHSRELLRTFSGHSKAITDTDFHITGKTFLTASYDRQMKLWDTETGQCISRFSTGKTPHV 372
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
++ NP+ + + LAGMSDKKIVQ+D T E QEYD HL A+NT+TFVD NRRF+++SD
Sbjct: 373 IRFNPNPENSHEFLAGMSDKKIVQFDTRTGEQVQEYDHHLAAINTLTFVDQNRRFISTSD 432
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
DKSLR WE+GIPV IK+I+EP+M ++ + HPN ++A QS DNQI++Y ++F+ N+
Sbjct: 433 DKSLRAWEYGIPVPIKFIAEPYMFALTRAAAHPNGKYVAFQSGDNQIVVYGATDKFRQNR 492
Query: 451 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK-CWF 486
KK F GH AGYA + SPDG+F+ SGD G W+
Sbjct: 493 KKSFRGHNNAGYAIDLTISPDGQFIASGDSAGLFSWY 529
Score = 128 (50.1 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 88 SQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMR--NHKLGFVEDASIDSFVFDEQYNT 145
S + YN TY+ L P GP++P+ G G++ N G+ E A+I F Q+ T
Sbjct: 49 SSKALTYNATYDDLSRPSQGPSNPFKSAGAGNGLKRKNVPTGYAEAAAISESTFTAQHRT 108
Query: 146 FYKYGYAADP-AGNNYVGDFEALEKNNGVSVYNIR 179
+ GY +P A +VG+ + + G V ++
Sbjct: 109 YQSLGYTRNPTAPEQFVGNLDHAAQFGGRDVVQMK 143
Score = 81 (33.6 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 28/125 (22%), Positives = 54/125 (43%)
Query: 275 KCMRTYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT-ETGQVIRTFSTGKIPYVVK 332
K + T+ H+KA+ + F G L+++ D K WD + +++RTFS G +
Sbjct: 273 KLVHTWKSHTKAITSLRFFPQAGHLLLSSAADGKAKIWDVYHSRELLRTFS-GHSKAITD 331
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITF---VDSNRRFVTSS 389
+ + L A D+++ WD T + + + I F +++ F+
Sbjct: 332 TDFHITGKTFLTASY-DRQMKLWDTETGQCISRFSTGK-TPHVIRFNPNPENSHEFLAGM 389
Query: 390 DDKSL 394
DK +
Sbjct: 390 SDKKI 394
Score = 74 (31.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 466 VNFSPD-GRFVMSGDGEGKCWFWD-WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 523
+ F P G ++S +GK WD + S ++ RT H ++H + T +
Sbjct: 288 LRFFPQAGHLLLSSAADGKAKIWDVYHSRELLRTFSGHSKAITDTDFH-ITGKTFLTASY 346
Query: 524 DGLIKYWD 531
D +K WD
Sbjct: 347 DRQMKLWD 354
Score = 52 (23.4 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 14/85 (16%), Positives = 36/85 (42%)
Query: 360 KEITQEYDQHLGAVNTITFV-DSNRRFVTSSDDKSLRVWE-FGIPVVIKYISEPHMHSMP 417
K++ + H A+ ++ F + ++S+ D ++W+ + +++ S H ++
Sbjct: 272 KKLVHTWKSHTKAITSLRFFPQAGHLLLSSAADGKAKIWDVYHSRELLRTFSG-HSKAIT 330
Query: 418 SISLHPNTNWLAAQSLDNQILIYST 442
H S D Q+ ++ T
Sbjct: 331 DTDFHITGKTFLTASYDRQMKLWDT 355
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/39 (25%), Positives = 14/39 (35%)
Query: 493 KVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
K+ T K H + P + + DG K WD
Sbjct: 273 KLVHTWKSHTKAITSLRFFPQAGHLLLSSAADGKAKIWD 311
>CGD|CAL0001327 [details] [associations]
symbol:orf19.6347 species:5476 "Candida albicans" [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0000350 "generation of
catalytic spliceosome for second transesterification step"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0000348 "mRNA branch site recognition"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0001327 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000192 EMBL:AACQ01000189 KO:K12816
RefSeq:XP_711565.1 RefSeq:XP_711633.1 ProteinModelPortal:Q59PE6
STRING:Q59PE6 GeneID:3646758 GeneID:3646818 KEGG:cal:CaO19.13703
KEGG:cal:CaO19.6347 Uniprot:Q59PE6
Length = 520
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 109/277 (39%), Positives = 167/277 (60%)
Query: 270 STFHGK---CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
+TF GK +R + GH+ V+DI F G +FL+ YDK I+ WDT+TG++I++
Sbjct: 245 NTFQGKQYQLLRIFKGHNLPVKDIIFNQSGERFLSCGYDKYIRLWDTKTGEMIKSIKLKS 304
Query: 327 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT---QEYDQHLGAVNTITFVDSNR 383
IP V+ NP++ + G+S+ I +D N+ + T Q YD H G++N + + ++
Sbjct: 305 IPNVLLFNPNNKNNTEFIVGLSNFTIEHYDFNSIQYTNPIQIYDHHQGSINDLKSLGLDK 364
Query: 384 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
F++SSDDK++R+W + I + IK I++P HS+P I +HP N++A QS+DN I + +
Sbjct: 365 -FISSSDDKTVRIWSWQINIPIKVITDPSQHSIPCIKIHPQANYIALQSMDNSIKVIHSY 423
Query: 444 ERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
+F+ KKK F GH +AGY +++FSPDG+ +MSGD G +FWDWK+CK+ + LK +
Sbjct: 424 GKFKWYKKKFFTGHQIAGYGIEIDFSPDGKILMSGDCNGFAYFWDWKTCKLIKKLKIIDN 483
Query: 504 VC--------IGC-EWHPLEQSKVATCGWDGLIKYWD 531
+ C HP E SKVA G G I Y D
Sbjct: 484 TTTTTTKKKPLTCIVAHPQETSKVAIAGNSGEIYYCD 520
>SGD|S000002772 [details] [associations]
symbol:CDC40 "Pre-mRNA splicing factor" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IGI]
[GO:0000348 "mRNA branch site recognition" evidence=IGI]
[GO:0005681 "spliceosomal complex" evidence=IEA;IDA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IGI;IMP] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IGI;IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000002772 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938
GO:GO:0005681 EMBL:U28373 RefSeq:NP_010652.3 GeneID:851968
KEGG:sce:YDR364C KO:K12816 GO:GO:0000350 GO:GO:0000389
GO:GO:0000348 HOGENOM:HOG000214672 GeneTree:ENSGT00530000063583
OrthoDB:EOG4CG3J4 EMBL:U17018 PIR:S61159 RefSeq:NP_010654.3
ProteinModelPortal:P40968 SMR:P40968 DIP:DIP-1111N IntAct:P40968
MINT:MINT-617580 STRING:P40968 PaxDb:P40968 EnsemblFungi:YDR364C
GeneID:851972 KEGG:sce:YDR366C CYGD:YDR364c OMA:KGDGPWG
NextBio:970088 Genevestigator:P40968 GermOnline:YDR364C
Uniprot:P40968
Length = 455
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 95/265 (35%), Positives = 155/265 (58%)
Query: 272 FHG-KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+H +C+R + GH+K ++ + F D FL++S+D+++K WDTETG+V P
Sbjct: 193 YHDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKIWDTETGKVKTRLHLNSTPAD 252
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKE---ITQEYDQHLGAVNTITFVDSNRRFVT 387
V+ P + + I+ G+S+ KI+ +D E + Q YD HL ++ + + +F++
Sbjct: 253 VESRPTNPHEFIV--GLSNSKILHYDDRVSENQGLVQTYDHHLSSILALKYFPDGSKFIS 310
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
SS+DK++R+WE I V IK IS+ HSMP +++HP+ N+ AQS+DN+I +S + +++
Sbjct: 311 SSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSQNYFCAQSMDNRIYSFSLKPKYK 370
Query: 448 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
+ KK F GH AGY + FS DGR++ SGD + + + WDW + ++ +K I
Sbjct: 371 RHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDWNTSRLLNNIKIPGNKPIT 430
Query: 508 -CEWHPLEQSKVATCGWDGLIKYWD 531
+WHP E SKV G G I D
Sbjct: 431 QVDWHPQETSKVICSGAAGKIYVCD 455
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 39/167 (23%), Positives = 79/167 (47%)
Query: 265 HVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS- 323
H +D+ + + ++TY H ++ + + DG+KF+++S DK ++ W+ + I+ S
Sbjct: 274 HYDDRVSENQGLVQTYDHHLSSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISD 333
Query: 324 TGK--IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK---EITQEYDQHLGAVNTITF 378
T + +P++ ++P QN A D +I + + K + + H A I+
Sbjct: 334 TAQHSMPFL-NVHPS---QNYFCAQSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISL 389
Query: 379 VDS-NRRFVTSSDDKS-LRVWEFGIPVVIKYISEPHMHSMPSISLHP 423
S + R++ S D KS L W++ ++ I P + + HP
Sbjct: 390 AFSGDGRYICSGDSKSRLFTWDWNTSRLLNNIKIPGNKPITQVDWHP 436
>TAIR|locus:2172084 [details] [associations]
symbol:AT5G54520 "AT5G54520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 IPI:IPI00547624 RefSeq:NP_200263.2
UniGene:At.29492 ProteinModelPortal:F4K0D3 SMR:F4K0D3 PRIDE:F4K0D3
EnsemblPlants:AT5G54520.1 GeneID:835540 KEGG:ath:AT5G54520
OMA:PPFKLNK Uniprot:F4K0D3
Length = 457
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 82/264 (31%), Positives = 138/264 (52%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
K +R ++ H+ V+D+ + G L+ YD + +D E G ++F ++ VVK +
Sbjct: 196 KKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFH 255
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD---- 390
PD+ N+ L+G S + WD+ + EY + LG + + F+ ++F++SSD
Sbjct: 256 PDNC--NVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGR 313
Query: 391 ---DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
+ ++ VW+ V + ++ P I HP AQS N I+ST F+
Sbjct: 314 NISENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFK 373
Query: 448 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
LNK KRF GH VAG+ + NFSPDG + SG +G + +D+KS + + LK +E C+
Sbjct: 374 LNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVN 433
Query: 508 CEWHPLEQSKVATCGWDGLIKYWD 531
+HP+ + VA C W+G + ++
Sbjct: 434 VSYHPVLPNVVAACSWNGQVSVFE 457
>MGI|MGI:3045255 [details] [associations]
symbol:Wdr25 "WD repeat domain 25" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:3045255 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AC140111 GeneTree:ENSGT00530000063583
EMBL:AK081117 EMBL:AC122811 IPI:IPI00757781 IPI:IPI00989348
RefSeq:NP_808270.2 UniGene:Mm.342082 ProteinModelPortal:E9Q349
SMR:E9Q349 PRIDE:E9Q349 Ensembl:ENSMUST00000047115
Ensembl:ENSMUST00000167816 GeneID:212198 KEGG:mmu:212198 CTD:79446
eggNOG:NOG301329 HOGENOM:HOG000007841 HOVERGEN:HBG069845
OMA:YSVGCEC NextBio:373502 Bgee:E9Q349 Uniprot:E9Q349
Length = 535
Score = 336 (123.3 bits), Expect = 6.5e-29, P = 6.5e-29
Identities = 76/265 (28%), Positives = 133/265 (50%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG-QVIRTFSTGKIPYVVK 332
G C++TY HS+AVR + G + L+ +D + D ETG QV S ++ +K
Sbjct: 273 GHCLQTYSVHSEAVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLK 331
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD-- 390
+P D N+ L G +I WDM T ++ + Y + I F+ F++S+D
Sbjct: 332 FHPKD--HNVFLCGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDAS 389
Query: 391 -----DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445
D+++ W+F I ++ PS++LHP AQ+ N + ++S+
Sbjct: 390 TRDSADRTIIAWDFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWP 449
Query: 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 505
+++++++R+ GH V GYA SP G +++G +G+ + +++ TL+ H C
Sbjct: 450 YRMSRRRRYEGHKVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQAC 509
Query: 506 IGCEWHPLEQSKVATCGWDGLIKYW 530
+G +HP+ S + TC W G IK W
Sbjct: 510 LGTTYHPVLPSVLGTCSWGGDIKIW 534
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 289 (106.8 bits), Expect = 4.1e-25, P = 4.1e-25
Identities = 74/265 (27%), Positives = 129/265 (48%)
Query: 272 FHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV- 330
+ GK RT GH + + DI++ D +AS DK IK WD E+G++++T G YV
Sbjct: 76 YDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLK-GHKEYVF 134
Query: 331 -VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
V NP + N++++G D+ + WD+NT E T+ H V + F V+ S
Sbjct: 135 GVSFNP---QSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGS 191
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
D ++R+W+ ++ IS + + PN ++ A +LDN + ++S + N
Sbjct: 192 YDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWS----YNNN 247
Query: 450 KK--KRFAGHIVAGYACQVNFSPD-GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
KK K + GH Y FS G+++++G + + ++ ++ ++ +TL HE V +
Sbjct: 248 KKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVL 307
Query: 507 GCEWHPLEQSKVA-TCGWDGLIKYW 530
HP E + D +K W
Sbjct: 308 TVACHPTENIIASGALEKDRSVKIW 332
Score = 197 (74.4 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 61/227 (26%), Positives = 102/227 (44%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T GH K++ + F DG +AS DK IK W G+ RT G + + D
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLE-GHKEGISDIAWSQD 99
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+ ++ + DK I WD+ + ++ + H V ++F + V+ S D+++R+W+
Sbjct: 100 SK-LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNW--LAAQSLDNQILIYSTRERFQLNKKKRFAG 456
K IS HS P +H N + + + S D + I+ T LN G
Sbjct: 159 VNTGECTKMISA---HSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDG 215
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
V+ V FSP+G+FV++G + W + + K + LK + G
Sbjct: 216 KEVSF----VKFSPNGKFVLAGTLDNTLRLWSYNNNK--KCLKTYTG 256
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 36/130 (27%), Positives = 65/130 (50%)
Query: 404 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGY 462
++KY + H+ S+ S+ P+ WLA+ S D I I+ + +F+ + GH G
Sbjct: 37 ILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFE----RTLEGH-KEGI 91
Query: 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 522
+ + +S D + + S + WD +S K+ +TLK H+ G ++P QS + G
Sbjct: 92 S-DIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNP--QSNLIVSG 148
Query: 523 -WDGLIKYWD 531
+D ++ WD
Sbjct: 149 SFDENVRIWD 158
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 32/163 (19%), Positives = 70/163 (42%)
Query: 369 HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 428
HL +++++ F + ++S DK++++W + E H + I+ ++ +
Sbjct: 45 HLKSISSVKFSPDGKWLASASADKTIKIWG-AYDGKFERTLEGHKEGISDIAWSQDSKLI 103
Query: 429 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488
+ S D I I+ + K GH Y V+F+P ++SG + WD
Sbjct: 104 CSASDDKTIKIWDVESGKMV---KTLKGH--KEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
Query: 489 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+ + + + H G ++ + + V + +DG ++ WD
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNR-DGTLVVSGSYDGTVRIWD 200
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 274 (101.5 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 66/257 (25%), Positives = 121/257 (47%)
Query: 277 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLN 334
++ + GH + D++F +D ++AS DK +K WD ETG +I+T G Y V N
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTL-IGHTNYAFCVNFN 122
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
P + N++++G D+ + WD+ T + + H V + F V+SS D
Sbjct: 123 P---QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC 179
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
R+W+ G +K + + + + PN ++ +LDN + +++ L K +
Sbjct: 180 RIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFL---KTY 236
Query: 455 AGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPL 513
GH+ A Y FS +G+ ++SG + W+ S K+ + L+ H + HP
Sbjct: 237 TGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPT 296
Query: 514 EQSKVATCGWDGLIKYW 530
E + +A+ D ++ W
Sbjct: 297 E-NLIASGSLDKTVRIW 312
Score = 216 (81.1 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/176 (25%), Positives = 94/176 (53%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
GKC++ HS V + F DG+ +++SYD + WD+ TG ++T + P V V
Sbjct: 145 GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFV 204
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA---VNTITFVDSNRRFVTS 388
+ +P+ +L G D + W++++ + + Y H+ A +++ V + +R V+
Sbjct: 205 RFSPNG---KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSG 261
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
S+D + +WE +++ + E H ++ +++ HP N +A+ SLD + I++ ++
Sbjct: 262 SEDNCVHMWELNSKKLLQKL-EGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316
Score = 159 (61.0 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 53/261 (20%), Positives = 107/261 (40%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-----GQVIRTFSTGKIPYVVK 332
+T H++AV + F +DG +AS DK I+ + T + ++ F TG +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEF-TGHENGISD 76
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
+ D + I+ A DK + WD+ T + + H + F + V+ S D+
Sbjct: 77 VAFSSDARFIVSAS-DDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDE 135
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++R+W+ +K + H + ++ + + + + + S D I+ + +
Sbjct: 136 TVRIWDVTTGKCLKVLPA-HSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV--CIGCEW 510
V+ V FSP+G+F++ G + W+ S K +T H CI +
Sbjct: 195 DDENPPVSF----VRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAF 250
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
++ + D + W+
Sbjct: 251 SVTNGKRIVSGSEDNCVHMWE 271
Score = 135 (52.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 39/175 (22%), Positives = 76/175 (43%)
Query: 363 TQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEP------HMHSM 416
+Q H AV+++ F R ++S DK++R + I + I+EP H + +
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYT--INTINDPIAEPVQEFTGHENGI 74
Query: 417 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 476
++ + ++ + S D + ++ + K GH YA VNF+P ++
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDVETGSLI---KTLIGH--TNYAFCVNFNPQSNMIV 129
Query: 477 SGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
SG + WD + K + L H +++ + S + + +DGL + WD
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR-DGSLIVSSSYDGLCRIWD 183
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 46/224 (20%), Positives = 89/224 (39%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VK 332
G ++T +GH+ ++F ++ S+D+ ++ WD TG+ ++ P V
Sbjct: 103 GSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVD 162
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY-DQHLGAVNTITFVDSNRRFVTSSDD 391
N D +++++ D WD T + D V+ + F + + + + D
Sbjct: 163 FNRDG---SLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLD 219
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLH---PNTNWLAAQSLDNQILIYSTRERFQL 448
+LR+W +K + H+++ IS N + + S DN + ++ + L
Sbjct: 220 NTLRLWNISSAKFLKTYTG-HVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLL 278
Query: 449 NKKKRFAGHI--VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 490
K + GH V AC P + SG + W K
Sbjct: 279 QKLE---GHTETVMNVACH----PTENLIASGSLDKTVRIWTQK 315
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 268 (99.4 bits), Expect = 9.4e-23, P = 9.4e-23
Identities = 66/262 (25%), Positives = 124/262 (47%)
Query: 272 FHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 331
+ GK +T GH + D+++ +D ++AS DK +K WD +G+ ++T G YV
Sbjct: 49 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVF 107
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
N + + N++++G D+ + WD+ T + + H V+ + F V+SS D
Sbjct: 108 CCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 166
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
R+W+ +K + + + + PN ++ A +LDN + ++ + L
Sbjct: 167 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL--- 223
Query: 452 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
K + GH Y NFS G++++SG + + W+ ++ ++ + L+ H V I
Sbjct: 224 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC 283
Query: 511 HPLEQSKVATCGW--DGLIKYW 530
HP E +A+ D IK W
Sbjct: 284 HPTENI-IASAALENDKTIKLW 304
Score = 192 (72.6 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 63/257 (24%), Positives = 112/257 (43%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T GH+KAV + F +G ++S DK IK W G+ +T S K+ + + D
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 72
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
N+L++ DK + WD+++ + + H V F + V+ S D+S+R+W+
Sbjct: 73 S-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 131
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNW--LAAQSLDNQILIYSTRERFQLNKKKRFAG 456
+K + P HS P ++H N + + + S D I+ T Q K
Sbjct: 132 VKTGKCLKTL--P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDD 187
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEWHPLE 514
+ + V FSP+G+++++ + WD+ K +T H E CI +
Sbjct: 188 NPPVSF---VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 244
Query: 515 QSKVATCGWDGLIKYWD 531
+ + D L+ W+
Sbjct: 245 GKWIVSGSEDNLVYIWN 261
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYA 463
+K+ H ++ S+ PN WLA+ S D I I+ + +F+ K +GH + G +
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE----KTISGHKL-GIS 65
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG- 522
V +S D ++S + WD S K +TLK H C ++P QS + G
Sbjct: 66 -DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGS 122
Query: 523 WDGLIKYWD 531
+D ++ WD
Sbjct: 123 FDESVRIWD 131
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 268 (99.4 bits), Expect = 9.4e-23, P = 9.4e-23
Identities = 66/262 (25%), Positives = 124/262 (47%)
Query: 272 FHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 331
+ GK +T GH + D+++ +D ++AS DK +K WD +G+ ++T G YV
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVF 133
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
N + + N++++G D+ + WD+ T + + H V+ + F V+SS D
Sbjct: 134 CCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
R+W+ +K + + + + PN ++ A +LDN + ++ + L
Sbjct: 193 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL--- 249
Query: 452 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
K + GH Y NFS G++++SG + + W+ ++ ++ + L+ H V I
Sbjct: 250 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC 309
Query: 511 HPLEQSKVATCGW--DGLIKYW 530
HP E +A+ D IK W
Sbjct: 310 HPTENI-IASAALENDKTIKLW 330
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 63/257 (24%), Positives = 112/257 (43%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T GH+KAV + F +G ++S DK IK W G+ +T S K+ + + D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
N+L++ DK + WD+++ + + H V F + V+ S D+S+R+W+
Sbjct: 99 S-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNW--LAAQSLDNQILIYSTRERFQLNKKKRFAG 456
+K + P HS P ++H N + + + S D I+ T Q K
Sbjct: 158 VKTGKCLKTL--P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDD 213
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEWHPLE 514
+ + V FSP+G+++++ + WD+ K +T H E CI +
Sbjct: 214 NPPVSF---VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 270
Query: 515 QSKVATCGWDGLIKYWD 531
+ + D L+ W+
Sbjct: 271 GKWIVSGSEDNLVYIWN 287
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYA 463
+K+ H ++ S+ PN WLA+ S D I I+ + +F+ K +GH + G +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE----KTISGHKL-GIS 91
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG- 522
V +S D ++S + WD S K +TLK H C ++P QS + G
Sbjct: 92 -DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGS 148
Query: 523 WDGLIKYWD 531
+D ++ WD
Sbjct: 149 FDESVRIWD 157
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 268 (99.4 bits), Expect = 9.4e-23, P = 9.4e-23
Identities = 66/262 (25%), Positives = 124/262 (47%)
Query: 272 FHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 331
+ GK +T GH + D+++ +D ++AS DK +K WD +G+ ++T G YV
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVF 133
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
N + + N++++G D+ + WD+ T + + H V+ + F V+SS D
Sbjct: 134 CCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
R+W+ +K + + + + PN ++ A +LDN + ++ + L
Sbjct: 193 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL--- 249
Query: 452 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
K + GH Y NFS G++++SG + + W+ ++ ++ + L+ H V I
Sbjct: 250 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC 309
Query: 511 HPLEQSKVATCGW--DGLIKYW 530
HP E +A+ D IK W
Sbjct: 310 HPTENI-IASAALENDKTIKLW 330
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 63/257 (24%), Positives = 112/257 (43%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T GH+KAV + F +G ++S DK IK W G+ +T S K+ + + D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
N+L++ DK + WD+++ + + H V F + V+ S D+S+R+W+
Sbjct: 99 S-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNW--LAAQSLDNQILIYSTRERFQLNKKKRFAG 456
+K + P HS P ++H N + + + S D I+ T Q K
Sbjct: 158 VKTGKCLKTL--P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDD 213
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEWHPLE 514
+ + V FSP+G+++++ + WD+ K +T H E CI +
Sbjct: 214 NPPVSF---VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 270
Query: 515 QSKVATCGWDGLIKYWD 531
+ + D L+ W+
Sbjct: 271 GKWIVSGSEDNLVYIWN 287
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYA 463
+K+ H ++ S+ PN WLA+ S D I I+ + +F+ K +GH + G +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE----KTISGHKL-GIS 91
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG- 522
V +S D ++S + WD S K +TLK H C ++P QS + G
Sbjct: 92 -DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGS 148
Query: 523 WDGLIKYWD 531
+D ++ WD
Sbjct: 149 FDESVRIWD 157
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 268 (99.4 bits), Expect = 9.4e-23, P = 9.4e-23
Identities = 66/262 (25%), Positives = 124/262 (47%)
Query: 272 FHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 331
+ GK +T GH + D+++ +D ++AS DK +K WD +G+ ++T G YV
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVF 133
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
N + + N++++G D+ + WD+ T + + H V+ + F V+SS D
Sbjct: 134 CCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
R+W+ +K + + + + PN ++ A +LDN + ++ + L
Sbjct: 193 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL--- 249
Query: 452 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
K + GH Y NFS G++++SG + + W+ ++ ++ + L+ H V I
Sbjct: 250 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC 309
Query: 511 HPLEQSKVATCGW--DGLIKYW 530
HP E +A+ D IK W
Sbjct: 310 HPTENI-IASAALENDKTIKLW 330
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 63/257 (24%), Positives = 112/257 (43%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T GH+KAV + F +G ++S DK IK W G+ +T S K+ + + D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
N+L++ DK + WD+++ + + H V F + V+ S D+S+R+W+
Sbjct: 99 S-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNW--LAAQSLDNQILIYSTRERFQLNKKKRFAG 456
+K + P HS P ++H N + + + S D I+ T Q K
Sbjct: 158 VKTGKCLKTL--P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDD 213
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEWHPLE 514
+ + V FSP+G+++++ + WD+ K +T H E CI +
Sbjct: 214 NPPVSF---VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 270
Query: 515 QSKVATCGWDGLIKYWD 531
+ + D L+ W+
Sbjct: 271 GKWIVSGSEDNLVYIWN 287
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYA 463
+K+ H ++ S+ PN WLA+ S D I I+ + +F+ K +GH + G +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE----KTISGHKL-GIS 91
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG- 522
V +S D ++S + WD S K +TLK H C ++P QS + G
Sbjct: 92 -DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGS 148
Query: 523 WDGLIKYWD 531
+D ++ WD
Sbjct: 149 FDESVRIWD 157
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 268 (99.4 bits), Expect = 9.4e-23, P = 9.4e-23
Identities = 66/262 (25%), Positives = 124/262 (47%)
Query: 272 FHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 331
+ GK +T GH + D+++ +D ++AS DK +K WD +G+ ++T G YV
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVF 133
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
N + + N++++G D+ + WD+ T + + H V+ + F V+SS D
Sbjct: 134 CCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
R+W+ +K + + + + PN ++ A +LDN + ++ + L
Sbjct: 193 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL--- 249
Query: 452 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
K + GH Y NFS G++++SG + + W+ ++ ++ + L+ H V I
Sbjct: 250 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC 309
Query: 511 HPLEQSKVATCGW--DGLIKYW 530
HP E +A+ D IK W
Sbjct: 310 HPTENI-IASAALENDKTIKLW 330
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 63/257 (24%), Positives = 112/257 (43%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T GH+KAV + F +G ++S DK IK W G+ +T S K+ + + D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
N+L++ DK + WD+++ + + H V F + V+ S D+S+R+W+
Sbjct: 99 S-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNW--LAAQSLDNQILIYSTRERFQLNKKKRFAG 456
+K + P HS P ++H N + + + S D I+ T Q K
Sbjct: 158 VKTGKCLKTL--P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDD 213
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEWHPLE 514
+ + V FSP+G+++++ + WD+ K +T H E CI +
Sbjct: 214 NPPVSF---VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 270
Query: 515 QSKVATCGWDGLIKYWD 531
+ + D L+ W+
Sbjct: 271 GKWIVSGSEDNLVYIWN 287
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYA 463
+K+ H ++ S+ PN WLA+ S D I I+ + +F+ K +GH + G +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE----KTISGHKL-GIS 91
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG- 522
V +S D ++S + WD S K +TLK H C ++P QS + G
Sbjct: 92 -DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGS 148
Query: 523 WDGLIKYWD 531
+D ++ WD
Sbjct: 149 FDESVRIWD 157
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 268 (99.4 bits), Expect = 9.4e-23, P = 9.4e-23
Identities = 66/262 (25%), Positives = 124/262 (47%)
Query: 272 FHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 331
+ GK +T GH + D+++ +D ++AS DK +K WD +G+ ++T G YV
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVF 133
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
N + + N++++G D+ + WD+ T + + H V+ + F V+SS D
Sbjct: 134 CCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
R+W+ +K + + + + PN ++ A +LDN + ++ + L
Sbjct: 193 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL--- 249
Query: 452 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
K + GH Y NFS G++++SG + + W+ ++ ++ + L+ H V I
Sbjct: 250 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC 309
Query: 511 HPLEQSKVATCGW--DGLIKYW 530
HP E +A+ D IK W
Sbjct: 310 HPTENI-IASAALENDKTIKLW 330
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 63/257 (24%), Positives = 112/257 (43%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T GH+KAV + F +G ++S DK IK W G+ +T S K+ + + D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
N+L++ DK + WD+++ + + H V F + V+ S D+S+R+W+
Sbjct: 99 S-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNW--LAAQSLDNQILIYSTRERFQLNKKKRFAG 456
+K + P HS P ++H N + + + S D I+ T Q K
Sbjct: 158 VKTGKCLKTL--P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDD 213
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEWHPLE 514
+ + V FSP+G+++++ + WD+ K +T H E CI +
Sbjct: 214 NPPVSF---VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 270
Query: 515 QSKVATCGWDGLIKYWD 531
+ + D L+ W+
Sbjct: 271 GKWIVSGSEDNLVYIWN 287
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYA 463
+K+ H ++ S+ PN WLA+ S D I I+ + +F+ K +GH + G +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE----KTISGHKL-GIS 91
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG- 522
V +S D ++S + WD S K +TLK H C ++P QS + G
Sbjct: 92 -DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGS 148
Query: 523 WDGLIKYWD 531
+D ++ WD
Sbjct: 149 FDESVRIWD 157
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 262 (97.3 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 67/259 (25%), Positives = 121/259 (46%)
Query: 273 HGKCMRTYM---GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY 329
HG C + +M GH A+ D+ + +DG++ ++AS DK ++ WD ETG+ I+ + +
Sbjct: 83 HGDC-KNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHS-SF 140
Query: 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY-DQHLGAVNTITFVDSNRRFVTS 388
V P ++++G D WDM + Q + D++ + ++F D+ + T
Sbjct: 141 VNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKY--QITAVSFSDAADKIFTG 198
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
D ++VW+ + E H ++ +SL P+ ++L +DN++ ++ R
Sbjct: 199 GVDNDVKVWDLRKGEATMTL-EGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQ 257
Query: 449 NK-KKRFAGHI--VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 505
N+ K F GH + ++SPDG V +G + WD S + L H G
Sbjct: 258 NRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSV 317
Query: 506 IGCEWHPLEQSKVATCGWD 524
C +HP E + +C D
Sbjct: 318 NECVFHPTEPI-IGSCSSD 335
Score = 152 (58.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 59/263 (22%), Positives = 107/263 (40%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 339
GH AV + F GT + S+D+ I W G + F G ++ L+ D
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDC-KNFMVLKGHKNAILDLHWTSDG 108
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS-SDDKSLRVWE 398
I+ A DK + WD+ T + ++ +H VN+ + S SDD + ++W+
Sbjct: 109 SQIVSAS-PDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH- 457
I+ P + + ++S + + +DN + ++ R+ GH
Sbjct: 168 MRQRGAIQTF--PDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKG---EATMTLEGHQ 222
Query: 458 -IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS-CKVFRTLKCHEGV-------CIGC 508
+ G ++ SPDG ++++ + K WD + R +K EG + C
Sbjct: 223 DTITG----MSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKC 278
Query: 509 EWHPLEQSKVATCGWDGLIKYWD 531
W P + +KV D ++ WD
Sbjct: 279 SWSP-DGTKVTAGSSDRMVHIWD 300
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 261 (96.9 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 63/265 (23%), Positives = 127/265 (47%)
Query: 272 FHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 331
+ G C +T GHS + D+++ +D ++ ++AS DK +K WD +G+ ++T G +V
Sbjct: 69 YDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLK-GHSDFVF 127
Query: 332 --KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
NP N++++G D+ + W++ T + + H ++ + F + V+ S
Sbjct: 128 CCDFNPPS---NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGS 184
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS-TRERFQL 448
D R+W+ ++ +++ + + PN ++ +LDN + ++ +R R
Sbjct: 185 YDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCL- 243
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGR-FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
K + GH Y +FS GR +V+SG + + W+ ++ ++ + L+ H V I
Sbjct: 244 ---KTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVIS 300
Query: 508 CEWHPLEQSKVATCGW--DGLIKYW 530
HP + +A+ D IK W
Sbjct: 301 AACHPTKNI-IASAALENDKTIKVW 324
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 52/256 (20%), Positives = 105/256 (41%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDD 337
T GHS A+ + F +G +++ D I W G +T + V + D
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
+ L++ DK + WDM + + + H V F + V+ S D+S+++W
Sbjct: 94 SR---LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIW 150
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
E +K +S H + +++ + N + + + S D I+ Q + G+
Sbjct: 151 EVKTGKCLKTLSA-HSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASG-QCLRTLADEGN 208
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEWHPLEQ 515
+ V FSP+G+++++ + WD+ + +T H E C+ + +
Sbjct: 209 PPVSF---VKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGR 265
Query: 516 SKVATCGWDGLIKYWD 531
V + D ++ W+
Sbjct: 266 KWVVSGSEDNMVYIWN 281
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 260 (96.6 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 66/262 (25%), Positives = 123/262 (46%)
Query: 272 FHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 331
+ GK +T GH + D+++ +D ++AS DK +K WD +G+ ++T G YV
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVF 133
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
N + + N++++G D+ + WD+ T + + H V+ + F V+SS D
Sbjct: 134 CCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
R+W+ +K + + + + PN ++ A +LDN + ++ + L
Sbjct: 193 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL--- 249
Query: 452 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
K + H Y NFS G++++SG + + W+ ++ +V + L+ H V I
Sbjct: 250 KTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTAC 309
Query: 511 HPLEQSKVATCGW--DGLIKYW 530
HP E +A+ D IK W
Sbjct: 310 HPTENI-IASAALENDKTIKLW 330
Score = 204 (76.9 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 64/257 (24%), Positives = 113/257 (43%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T GH+KAV + F +G ++S DK IK W G+ +T S K+ + + D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
N+L++ DK + WD+++ + + H V F + V+ S D+S+R+W+
Sbjct: 99 S-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNW--LAAQSLDNQILIYSTRERFQLNKKKRFAG 456
+K + P HS P ++H N + + + S D I+ T Q K
Sbjct: 158 VKTGKCLKTL--P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDD 213
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEWHPLE 514
+ + V FSP+G+++++ + WD+ K +T CH E CI +
Sbjct: 214 NPPVSF---VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTG 270
Query: 515 QSKVATCGWDGLIKYWD 531
+ + D L+ W+
Sbjct: 271 GKWIVSGSEDNLVYIWN 287
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYA 463
+K+ H ++ S+ PN WLA+ S D I I+ + +F+ K +GH + G +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE----KTISGHKL-GIS 91
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG- 522
V +S D ++S + WD S K +TLK H C ++P QS + G
Sbjct: 92 -DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGS 148
Query: 523 WDGLIKYWD 531
+D ++ WD
Sbjct: 149 FDESVRIWD 157
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 259 (96.2 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 67/264 (25%), Positives = 124/264 (46%)
Query: 272 FHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 331
+ GK +T GH + D+++ +D ++ S DK +K W+ TG+ ++T G YV
Sbjct: 102 YDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLK-GHSNYVF 160
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
N + + N++++G D+ + WD+ T + + H V+ + F V+SS D
Sbjct: 161 CCN-FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 219
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
R+W+ +K + + + + PN ++ A +LDN + ++ + L
Sbjct: 220 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL--- 276
Query: 452 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG--VCIGC 508
K + GH Y NFS G++++SG + + W+ +S +V + L+ H +C C
Sbjct: 277 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTAC 336
Query: 509 EWHPLEQSKVATCGW--DGLIKYW 530
HP E +A+ D IK W
Sbjct: 337 --HPTENI-IASAALENDKTIKLW 357
Score = 190 (71.9 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 62/257 (24%), Positives = 113/257 (43%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T GH+KAV + F +G ++S DK IK W G+ +T S K+ + + D
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 125
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+ +L++G DK + W+++T + + H V F + V+ S D+S+R+W+
Sbjct: 126 SR-LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 184
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNW--LAAQSLDNQILIYSTRERFQLNKKKRFAG 456
+K + P HS P ++H N + + + S D I+ T Q K
Sbjct: 185 VRTGKCLKTL--P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDD 240
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEWHPLE 514
+ + V FSP+G+++++ + WD+ K +T H E CI +
Sbjct: 241 NPPVSF---VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 297
Query: 515 QSKVATCGWDGLIKYWD 531
+ + D ++ W+
Sbjct: 298 GKWIVSGSEDNMVYIWN 314
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/129 (27%), Positives = 63/129 (48%)
Query: 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYA 463
+K+ H ++ ++ PN WLA+ S D I I+ + +F+ K +GH + G +
Sbjct: 64 LKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFE----KTISGHKL-GIS 118
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG- 522
V +S D R ++SG + W+ + K +TLK H C ++P QS + G
Sbjct: 119 -DVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNP--QSNLIVSGS 175
Query: 523 WDGLIKYWD 531
+D ++ WD
Sbjct: 176 FDESVRIWD 184
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 271 (100.5 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 69/260 (26%), Positives = 133/260 (51%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G+ ++T GHS++VR ++F DG + ++S D IK W++ TG++ +TF G ++ V
Sbjct: 950 GELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFK-GHDLWIRAV 1008
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+PD L++G D I WD+ T E+ Q + H +V+ + F +++ +SS D
Sbjct: 1009 AFSPDGKH---LVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLD 1065
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
++++W+ + + + E H + S++ P+ LA+ S D I +++ +L +
Sbjct: 1066 STIKLWDSATGELQRTL-EGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG-EL--Q 1121
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWH 511
+ G + + V FSPDG+ + SG + WD + ++ +TL+ H +
Sbjct: 1122 QTLTGR--SDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFS 1179
Query: 512 PLEQSKVATCGWDGLIKYWD 531
P + +A+ +D K WD
Sbjct: 1180 P-DGKLLASGSYDQTAKLWD 1198
Score = 262 (97.3 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 64/256 (25%), Positives = 127/256 (49%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNP 335
+T H V + F DG + ++ SYD +K WD TG++++T +G + + +P
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLA-FSP 802
Query: 336 DDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLR 395
D +L +G D I WD T E+ Q ++ H ++ ++ F + ++SDD +++
Sbjct: 803 DG---KLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIK 859
Query: 396 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 455
+W+ + + + + H S+ S++ P+ LA+ SLD+ I +++ +L +
Sbjct: 860 IWDLATGELQQTL-DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATG-ELQQS--LE 915
Query: 456 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 515
G +G+ V FSPDG+ + SG + W+ + ++ +TL+ H + P +
Sbjct: 916 GR--SGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP-DG 972
Query: 516 SKVATCGWDGLIKYWD 531
++A+ D IK W+
Sbjct: 973 KQLASSSSDTTIKLWN 988
Score = 231 (86.4 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 73/240 (30%), Positives = 116/240 (48%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
D +T G+ RT GHS+ VR ++F DG + SYD IK W+ TG++ +T TG+
Sbjct: 1072 DSAT--GELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTL-TGRS 1128
Query: 328 PYV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
+V V +PD KQ L +G D I WD T E+ Q + H + ++ F +
Sbjct: 1129 DWVDSVAFSPDG-KQ--LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLL 1185
Query: 386 VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS--TR 443
+ S D++ ++W+ +++ I E H + S++ P+ LA+ S I ++ T
Sbjct: 1186 ASGSYDQTAKLWDPATGELLQ-IFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTG 1244
Query: 444 ERFQ-LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCKVFRTLKCH 501
E Q LN AG + FSPDG + S D + K WD + ++ + LK H
Sbjct: 1245 ELLQTLNDPDESAGSVA--------FSPDGNRLASVDIFDTK--IWDPATGELLQALKGH 1294
Score = 226 (84.6 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 69/262 (26%), Positives = 120/262 (45%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP-YVVK 332
G+ ++T GHS V ++F DG + SYD I WD+ TG++++TF + V
Sbjct: 782 GELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVA 841
Query: 333 LNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
PD + LA SD ++ WD+ T E+ Q D H +V ++ F + +SS D
Sbjct: 842 FAPDGKE----LASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLD 897
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS--TRERFQLN 449
+++VW + + + E + S++ P+ LA+ S N + +++ T E Q
Sbjct: 898 STIKVWNPATGELQQSL-EGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQT- 955
Query: 450 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCE 509
GH + V FSPDG+ + S + W+ + ++ +T K H+
Sbjct: 956 ----LEGHSQS--VRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVA 1009
Query: 510 WHPLEQSKVATCGWDGLIKYWD 531
+ P + + + D IK WD
Sbjct: 1010 FSP-DGKHLVSGSDDNTIKLWD 1030
Score = 208 (78.3 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 61/259 (23%), Positives = 116/259 (44%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST-GKIPYVVK 332
G+ +T+ GH +R ++F DG ++ S D IK WD T ++ ++ + + V
Sbjct: 992 GELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVA 1051
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
+PDD KQ L + D I WD T E+ + + H V ++TF + ++S D
Sbjct: 1052 FSPDD-KQ--LASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDG 1108
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++++W + ++ + S++ P+ LA+ D+ I ++ + L +
Sbjct: 1109 TIKLWN-PLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELL---Q 1164
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
GH + V FSPDG+ + SG + WD + ++ + + H + P
Sbjct: 1165 TLEGH--SDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP 1222
Query: 513 LEQSKVATCGWDGLIKYWD 531
+ +A+ + IK WD
Sbjct: 1223 -DGKLLASSSYGETIKLWD 1240
Score = 180 (68.4 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 56/220 (25%), Positives = 102/220 (46%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQ 340
HS++V ++F D + ++S D IK WD+ TG++ RT G V V +PD
Sbjct: 1043 HSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLE-GHSQGVRSVTFSPDG--- 1098
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
+L + D I W+ T E+ Q V+++ F ++ + D ++++W+
Sbjct: 1099 KLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSA 1158
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY--STRERFQLNKKKRFAGHI 458
+++ + E H + S+ P+ LA+ S D ++ +T E Q+ F GH
Sbjct: 1159 TGELLQTL-EGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQI-----FEGH- 1211
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498
+ + V FSPDG+ + S WD + ++ +TL
Sbjct: 1212 -SKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTL 1250
Score = 46 (21.3 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 18/57 (31%), Positives = 23/57 (40%)
Query: 81 QSRPIDPSQHFIAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSF 137
QS+ ID + I Y L+ H D + Q H L VE+A DSF
Sbjct: 113 QSQEIDDA---IGQLKRYTSLFVAALQIDHVGFTDPVEQNFDLHDLKIVEEAIHDSF 166
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 251 (93.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 65/248 (26%), Positives = 114/248 (45%)
Query: 273 HGKC--MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+G C T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G +V
Sbjct: 97 YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFV 155
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
P ++ G D + WD+ K Q + Q+ V +TF D++ + ++
Sbjct: 156 NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGI 214
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R F +
Sbjct: 215 DNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAPKE 272
Query: 451 K--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
+ K F G H + ++SPDG + +G + + WD S +V L H G
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSIN 332
Query: 507 GCEWHPLE 514
+HP E
Sbjct: 333 EVAFHPDE 340
Score = 160 (61.4 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 58/261 (22%), Positives = 116/261 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 339
GH V F +G+ +A +D+ I W+ G ++T G V++L+ + D
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDC-DNYATLKGHSGAVMELHYNTDG 122
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRVWE 398
++L + +DK + WD T E + H VN+ + V T SDD ++++W+
Sbjct: 123 -SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
++ + + + +++ + ++ + + +DN I ++ R+ +L R GH
Sbjct: 182 IRKKAAVQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMR--GH- 235
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------C-KVFR-TLKCHEGVCIGCEW 510
A ++ S +G +++S + WD + C K+F+ + E + C W
Sbjct: 236 -ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
P + SK+A D + WD
Sbjct: 295 SP-DGSKIAAGSADRFVYVWD 314
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 54/229 (23%), Positives = 96/229 (41%)
Query: 266 VEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFST 324
V D T G+ ++ GH+ V G + + T S D +K WD ++TF
Sbjct: 136 VWDSET--GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN 193
Query: 325 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
V N D+ +++G D I WD+ ++T H +V ++
Sbjct: 194 TYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 385 FVTSSDDKSLRVWEFGIPVVIKY----ISEPHMHSMPS----ISLHPNTNWLAAQSLDNQ 436
++++ D ++RVW+ P K I + ++H+ S P+ + +AA S D
Sbjct: 251 LLSNAMDNTVRVWDVR-PFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 437 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 485
+ ++ T R L K GH AG +V F PD ++S + + +
Sbjct: 310 VYVWDTTSRRVLYK---LPGH--AGSINEVAFHPDEPIILSASSDKRLY 353
Score = 116 (45.9 bits), Expect = 0.00071, P = 0.00071
Identities = 30/133 (22%), Positives = 60/133 (45%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPYV 330
K T GH+ +V +S ++G+ L+ + D ++ WD + ++ F +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 331 VKL-----NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
L +PD K + AG +D+ + WD ++ + + H G++N + F
Sbjct: 287 KNLLRCSWSPDGSK---IAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPII 343
Query: 386 VTSSDDKSLRVWE 398
+++S DK L + E
Sbjct: 344 LSASSDKRLYMGE 356
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 249 (92.7 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 64/248 (25%), Positives = 114/248 (45%)
Query: 273 HGKC--MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+G C T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G +V
Sbjct: 96 YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFV 154
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
P ++ G D + WD+ K Q + Q+ V +TF D++ + ++
Sbjct: 155 NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGI 213
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R F +
Sbjct: 214 DNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAPKE 271
Query: 451 K--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
+ K F G H + ++SPDG + +G + + WD S ++ L H G
Sbjct: 272 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 331
Query: 507 GCEWHPLE 514
+HP E
Sbjct: 332 EVAFHPDE 339
Score = 161 (61.7 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 59/261 (22%), Positives = 116/261 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 339
GH V F +G+ +A +D+ I W+ G ++T G V++L+ + D
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDC-DNYATLKGHSGAVMELHYNTDG 121
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRVWE 398
++L + +DK + WD T E + H VN+ + V T SDD ++++W+
Sbjct: 122 -SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I+ + + + +++ + ++ + + +DN I ++ R+ +L R GH
Sbjct: 181 IRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMR--GH- 234
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------C-KVFR-TLKCHEGVCIGCEW 510
A ++ S +G +++S + WD + C K+F+ + E + C W
Sbjct: 235 -ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 293
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
P + SK+A D + WD
Sbjct: 294 SP-DGSKIAAGSADRFVYVWD 313
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 31/133 (23%), Positives = 60/133 (45%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPYV 330
K T GH+ +V +S ++G+ L+ + D ++ WD + ++ F +
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 331 VKL-----NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
L +PD K + AG +D+ + WD ++ I + H G++N + F
Sbjct: 286 KNLLRCSWSPDGSK---IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 342
Query: 386 VTSSDDKSLRVWE 398
+++S DK L + E
Sbjct: 343 ISASSDKRLYMGE 355
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 249 (92.7 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 64/248 (25%), Positives = 114/248 (45%)
Query: 273 HGKC--MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+G C T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G +V
Sbjct: 97 YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFV 155
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
P ++ G D + WD+ K Q + Q+ V +TF D++ + ++
Sbjct: 156 NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGI 214
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R F +
Sbjct: 215 DNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAPKE 272
Query: 451 K--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
+ K F G H + ++SPDG + +G + + WD S ++ L H G
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 332
Query: 507 GCEWHPLE 514
+HP E
Sbjct: 333 EVAFHPDE 340
Score = 161 (61.7 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 59/261 (22%), Positives = 116/261 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 339
GH V F +G+ +A +D+ I W+ G ++T G V++L+ + D
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDC-DNYATLKGHSGAVMELHYNTDG 122
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRVWE 398
++L + +DK + WD T E + H VN+ + V T SDD ++++W+
Sbjct: 123 -SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I+ + + + +++ + ++ + + +DN I ++ R+ +L R GH
Sbjct: 182 IRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMR--GH- 235
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------C-KVFR-TLKCHEGVCIGCEW 510
A ++ S +G +++S + WD + C K+F+ + E + C W
Sbjct: 236 -ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
P + SK+A D + WD
Sbjct: 295 SP-DGSKIAAGSADRFVYVWD 314
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/229 (24%), Positives = 96/229 (41%)
Query: 266 VEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFST 324
V D T G+ ++ GH+ V G + + T S D +K WD I+TF
Sbjct: 136 VWDSET--GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN 193
Query: 325 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
V N D+ +++G D I WD+ ++T H +V ++
Sbjct: 194 TYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 385 FVTSSDDKSLRVWEFGIPVVIKY----ISEPHMHSMPS----ISLHPNTNWLAAQSLDNQ 436
++++ D ++RVW+ P K I + ++H+ S P+ + +AA S D
Sbjct: 251 LLSNAMDNTVRVWDVR-PFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 437 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 485
+ ++ T R L K GH AG +V F PD ++S + + +
Sbjct: 310 VYVWDTTSRRILYK---LPGH--AGSINEVAFHPDEPIILSASSDKRLY 353
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 31/133 (23%), Positives = 60/133 (45%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPYV 330
K T GH+ +V +S ++G+ L+ + D ++ WD + ++ F +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 331 VKL-----NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
L +PD K + AG +D+ + WD ++ I + H G++N + F
Sbjct: 287 KNLLRCSWSPDGSK---IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 386 VTSSDDKSLRVWE 398
+++S DK L + E
Sbjct: 344 LSASSDKRLYMGE 356
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 249 (92.7 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 64/248 (25%), Positives = 114/248 (45%)
Query: 273 HGKC--MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+G C T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G +V
Sbjct: 97 YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFV 155
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
P ++ G D + WD+ K Q + Q+ V +TF D++ + ++
Sbjct: 156 NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGI 214
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R F +
Sbjct: 215 DNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAPKE 272
Query: 451 K--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
+ K F G H + ++SPDG + +G + + WD S ++ L H G
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 332
Query: 507 GCEWHPLE 514
+HP E
Sbjct: 333 EVAFHPDE 340
Score = 161 (61.7 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 59/261 (22%), Positives = 116/261 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 339
GH V F +G+ +A +D+ I W+ G ++T G V++L+ + D
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDC-DNYATLKGHSGAVMELHYNTDG 122
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRVWE 398
++L + +DK + WD T E + H VN+ + V T SDD ++++W+
Sbjct: 123 -SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I+ + + + +++ + ++ + + +DN I ++ R+ +L R GH
Sbjct: 182 IRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMR--GH- 235
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------C-KVFR-TLKCHEGVCIGCEW 510
A ++ S +G +++S + WD + C K+F+ + E + C W
Sbjct: 236 -ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
P + SK+A D + WD
Sbjct: 295 SP-DGSKIAAGSADRFVYVWD 314
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/229 (24%), Positives = 96/229 (41%)
Query: 266 VEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFST 324
V D T G+ ++ GH+ V G + + T S D +K WD I+TF
Sbjct: 136 VWDSET--GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN 193
Query: 325 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
V N D+ +++G D I WD+ ++T H +V ++
Sbjct: 194 TYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 385 FVTSSDDKSLRVWEFGIPVVIKY----ISEPHMHSMPS----ISLHPNTNWLAAQSLDNQ 436
++++ D ++RVW+ P K I + ++H+ S P+ + +AA S D
Sbjct: 251 LLSNAMDNTVRVWDVR-PFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 437 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 485
+ ++ T R L K GH AG +V F PD ++S + + +
Sbjct: 310 VYVWDTTSRRILYK---LPGH--AGSINEVAFHPDEPIILSASSDKRLY 353
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 31/133 (23%), Positives = 60/133 (45%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPYV 330
K T GH+ +V +S ++G+ L+ + D ++ WD + ++ F +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 331 VKL-----NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
L +PD K + AG +D+ + WD ++ I + H G++N + F
Sbjct: 287 KNLLRCSWSPDGSK---IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 386 VTSSDDKSLRVWE 398
+++S DK L + E
Sbjct: 344 LSASSDKRLYMGE 356
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 237 (88.5 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 71/263 (26%), Positives = 118/263 (44%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 331
G ++TY H + VRD+ +D KF + D+ + YWD TG+VIR F G++ V
Sbjct: 50 GILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVN-AV 108
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEI--TQEYDQHLGAVNTITFVDSNRRFVTSS 389
K N D ++ AG D+ + WD + + Q D L V ++ + + S
Sbjct: 109 KFN--DSSSVVVSAGF-DRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE--IIGGS 163
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN--QILIYSTRERFQ 447
D ++R ++ I + +S+ + IS+ + N + A LD+ ++L +T E Q
Sbjct: 164 VDGTVRTFDMRIG---REMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQ 220
Query: 448 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
+ K GHI + + V+ G +G +FWD KV + H+ V
Sbjct: 221 VYK-----GHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTS 275
Query: 508 CEWHPLEQSKVATCGWDGLIKYW 530
+HP E + T DG I+ W
Sbjct: 276 VSYHPKEDCML-TSSVDGTIRVW 297
Score = 176 (67.0 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 64/254 (25%), Positives = 113/254 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDKQ 340
GH AV F DG LT D+ I+ W+ G +I+T+ S G+ V + D+ K
Sbjct: 16 GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAK- 74
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF- 399
G D+++ WD++T + +++ H G VN + F DS+ V++ D+SLRVW+
Sbjct: 75 -FCSCG-GDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCR 132
Query: 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459
V I + + ++ S+ L T + S+D + F + + + ++
Sbjct: 133 SHSVEPVQIIDTFLDTVMSVVL-TKTEIIGG-SVDGTV------RTFDMRIGREMSDNLG 184
Query: 460 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVA 519
C ++ S DG V++G + D + ++ + K H + L S
Sbjct: 185 QPVNC-ISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCC-LTNSDAH 242
Query: 520 TCGW--DGLIKYWD 531
G DGL+ +WD
Sbjct: 243 VIGGSEDGLVFFWD 256
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 251 (93.4 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 65/248 (26%), Positives = 113/248 (45%)
Query: 273 HGKC--MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+G C T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G +V
Sbjct: 123 YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFV 181
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
P ++ G D + WD+ K Q + Q+ V +TF D++ + ++
Sbjct: 182 NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGI 240
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D ++VW+ + Y H S+ +SL ++L + ++DN + I+ R F +
Sbjct: 241 DNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRP-FAPKE 298
Query: 451 K--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
+ K F G H + ++SPDG + G + + WD S ++ L H G
Sbjct: 299 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVN 358
Query: 507 GCEWHPLE 514
+HP E
Sbjct: 359 ELAFHPEE 366
Score = 153 (58.9 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 58/261 (22%), Positives = 114/261 (43%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 339
GH V F G +A +D+ I W+ G ++T G V++L+ + D
Sbjct: 91 GHEGEVYCCKFHPWGNTLASAGFDRLILLWNVY-GDC-DNYATLKGHSGAVMELHYNTDG 148
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRVWE 398
++L + +DK + WD T E + H VN+ + V T SDD ++++W+
Sbjct: 149 -SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 207
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
++ + + + +++ + ++ + + +DN I ++ R+ +L R GH
Sbjct: 208 IRKKAAVQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMR--GH- 261
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------C-KVFR-TLKCHEGVCIGCEW 510
A ++ S +G +++S + WD + C K+F+ + E + C W
Sbjct: 262 -ADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 320
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
P + SK+A D + WD
Sbjct: 321 SP-DGSKIAGGSADRFVYVWD 340
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 247 (92.0 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 63/247 (25%), Positives = 112/247 (45%)
Query: 273 HGKC--MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+G C T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G +V
Sbjct: 97 YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFV 155
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
P ++ G D + WD+ K Q + Q+ V +TF D++ + ++
Sbjct: 156 NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGI 214
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R +
Sbjct: 215 DNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 451 KKR-FAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
R F G H + ++SPDG + +G + + WD S ++ L H G
Sbjct: 274 CVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINE 333
Query: 508 CEWHPLE 514
+HP E
Sbjct: 334 VAFHPDE 340
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 58/261 (22%), Positives = 116/261 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 339
GH V F +G+ +A +D+ I W+ G ++T G V++L+ + D
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDC-DNYATLKGHSGAVMELHYNTDG 122
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRVWE 398
++L + +DK + WD T E + H VN+ + V T SDD ++++W+
Sbjct: 123 -SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I+ + + + +++ + ++ + + +DN I ++ R+ +L R GH
Sbjct: 182 IRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMR--GH- 235
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------C-KVFR-TLKCHEGVCIGCEW 510
A ++ S +G +++S + WD + C ++F+ + E + C W
Sbjct: 236 -ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSW 294
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
P + SK+A D + WD
Sbjct: 295 SP-DGSKIAAGSADRFVYVWD 314
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/229 (24%), Positives = 96/229 (41%)
Query: 266 VEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFST 324
V D T G+ ++ GH+ V G + + T S D +K WD I+TF
Sbjct: 136 VWDSET--GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN 193
Query: 325 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
V N D+ +++G D I WD+ ++T H +V ++
Sbjct: 194 TYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 385 FVTSSDDKSLRVWEFGIPVVIKY----ISEPHMHSMPS----ISLHPNTNWLAAQSLDNQ 436
++++ D ++RVW+ P K I + ++H+ S P+ + +AA S D
Sbjct: 251 LLSNAMDNTVRVWDVR-PFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 437 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 485
+ ++ T R L K GH AG +V F PD ++S + + +
Sbjct: 310 VYVWDTTSRRILYK---LPGH--AGSINEVAFHPDEPIILSASSDKRLY 353
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 32/133 (24%), Positives = 60/133 (45%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPYV 330
K T GH+ +V +S ++G+ L+ + D ++ WD + +R F +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFE 286
Query: 331 VKL-----NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
L +PD K + AG +D+ + WD ++ I + H G++N + F
Sbjct: 287 KNLLRCSWSPDGSK---IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 386 VTSSDDKSLRVWE 398
+++S DK L + E
Sbjct: 344 LSASSDKRLYMGE 356
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 249 (92.7 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 64/248 (25%), Positives = 114/248 (45%)
Query: 273 HGKC--MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+G C T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G +V
Sbjct: 96 YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFV 154
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
P ++ G D + WD+ K Q + Q+ V +TF D++ + ++
Sbjct: 155 NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGI 213
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R F +
Sbjct: 214 DNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAPKE 271
Query: 451 K--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
+ K F G H + ++SPDG + +G + + WD S ++ L H G
Sbjct: 272 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 331
Query: 507 GCEWHPLE 514
+HP E
Sbjct: 332 EVAFHPDE 339
Score = 161 (61.7 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 59/261 (22%), Positives = 116/261 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 339
GH V F +G+ +A +D+ I W+ G ++T G V++L+ + D
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDC-DNYATLKGHSGAVMELHYNTDG 121
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRVWE 398
++L + +DK + WD T E + H VN+ + V T SDD ++++W+
Sbjct: 122 -SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I+ + + + +++ + ++ + + +DN I ++ R+ +L R GH
Sbjct: 181 IRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMR--GH- 234
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------C-KVFR-TLKCHEGVCIGCEW 510
A ++ S +G +++S + WD + C K+F+ + E + C W
Sbjct: 235 -ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 293
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
P + SK+A D + WD
Sbjct: 294 SP-DGSKIAAGSADRFVYVWD 313
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 245 (91.3 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 62/258 (24%), Positives = 123/258 (47%)
Query: 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNP 335
C RT GH V D ++ D +TAS DK +K ++ T ++ +T G YV N
Sbjct: 113 CERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLK-GHTNYVFCCN- 170
Query: 336 DDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLR 395
+ + +++++G D+ + WD+ T + H V+ ++F + S D +R
Sbjct: 171 FNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVR 230
Query: 396 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 455
+W+ +K + + + + PN ++ + +LDN + ++ + L K++
Sbjct: 231 IWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTL---KQYQ 287
Query: 456 GHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH Y NFS G++++SG + K + W+ ++ +V ++L+ H I + HP+
Sbjct: 288 GHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPM- 346
Query: 515 QSKVATCGW--DGLIKYW 530
Q+ +A+ D I+ W
Sbjct: 347 QNMIASGALEPDNTIRIW 364
Score = 182 (69.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 49/174 (28%), Positives = 82/174 (47%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G C++T HS V +SF DG+ + SYD ++ WDT GQ ++T + P V V
Sbjct: 195 GMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFV 254
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTI--TF-VDSNRRFVTS 388
K +P+ +L+ D + WD + ++Y H I F V + ++
Sbjct: 255 KFSPNG---KYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISG 311
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL--DNQILIY 440
S+D + VW V++ + E H ++ + HP N +A+ +L DN I I+
Sbjct: 312 SEDCKIYVWNLQTKEVVQSL-EGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 171 (65.3 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 60/244 (24%), Positives = 112/244 (45%)
Query: 269 KSTFHG---KCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFST 324
+ST G K + T GH+K++ + F G KFL T+S DK +K W+ RT +
Sbjct: 61 ESTIPGAGYKLISTIEGHTKSISAVKFSPCG-KFLGTSSADKTVKIWNMSDLSCERTLTG 119
Query: 325 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
K+ V D ++I+ A DK + +++ T ++ + H V F +
Sbjct: 120 HKLG-VNDFAWSADSKSIVTAS-DDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSL 177
Query: 385 FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
V+ S D+S+R+W+ + +K + H + ++S + + + + + S D + I+ T
Sbjct: 178 VVSGSFDESVRIWDVRTGMCVKTLPA-HSDPVSAVSFNRDGSLITSGSYDGLVRIWDTAN 236
Query: 445 RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG- 503
Q K + + V FSP+G++++S + + WD+ K + + HE
Sbjct: 237 G-QCVKTLVDDENPPVAF---VKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENN 292
Query: 504 -VCI 506
CI
Sbjct: 293 KYCI 296
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 42/186 (22%), Positives = 83/186 (44%)
Query: 348 SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVV-IK 406
+DK + W+M+ + H VN + ++ VT+SDDK+L+++E +P V +
Sbjct: 99 ADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYE--VPTVKMA 156
Query: 407 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 466
+ H + + + +P ++ + + S D + I+ R + K H + V
Sbjct: 157 KTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCV---KTLPAH--SDPVSAV 211
Query: 467 NFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG-CEWHPLEQSKVATCGWDG 525
+F+ DG + SG +G WD + + +TL E + ++ P + + D
Sbjct: 212 SFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSP-NGKYILSSNLDN 270
Query: 526 LIKYWD 531
+K WD
Sbjct: 271 TLKLWD 276
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 41/180 (22%), Positives = 84/180 (46%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKL 333
K +T GH+ V +F + ++ S+D++++ WD TG ++T P V
Sbjct: 154 KMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSF 213
Query: 334 NPDDDKQNILLAGMSDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
N D +++ +G D + WD N + + D V + F + + ++S+ D
Sbjct: 214 NRDG---SLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDN 270
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN---WLAAQSLDNQILIYS--TRERFQ 447
+L++W+FG +K + H ++ I + + W+ + S D +I +++ T+E Q
Sbjct: 271 TLKLWDFGKGKTLKQY-QGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQ 329
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 246 (91.7 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 76/266 (28%), Positives = 122/266 (45%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPD 336
T GH + VR ++ N T +A DK +K WD E +VIR++ G + Y + L+P
Sbjct: 213 TLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYH-GHLSGVYCLALHPT 271
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
D +LL G D WD+ TK H V ++ ++ + VT S D +++
Sbjct: 272 LD---VLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKF 328
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W+ + ++ H S+ +++LHP N A+ S DN ++F L K + F
Sbjct: 329 WDLRYGKTMSTLTH-HKKSVRAMTLHPKENAFASASADNT-------KKFSLPKGE-FCH 379
Query: 457 HIVAGYACQVN---FSPDGRFVMSGDGEGKCWFWDWKSCKVFR---------TLKCHEGV 504
++++ +N + DG V GD G WFWDWKS F+ +L+ G+
Sbjct: 380 NMLSQQKTIINAMAVNEDGVMVTGGDN-GSIWFWDWKSGHSFQQSETIVQPGSLESEAGI 438
Query: 505 CIGCEWHPLEQSKVATCGWDGLIKYW 530
C + S++ TC D IK W
Sbjct: 439 YAAC--YDNTGSRLVTCEADKTIKMW 462
Score = 159 (61.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 47/169 (27%), Positives = 72/169 (42%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
K R GH VR ++F F T S D+ IK WD TG V++ TG I V L
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG-VLKLTLTGHIEQVRGLA 225
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
+ + AG DK++ WD+ ++ + Y HL V + + +T D
Sbjct: 226 VSNRHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVC 284
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
RVW+ + I +S H +++ S+ P + S D I + R
Sbjct: 285 RVWDIRTKMQIFALSG-HDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLR 332
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 48/216 (22%), Positives = 93/216 (43%)
Query: 321 TFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT-QEY---DQHLGAVNTI 376
T S+GK ++ N ++N+ A + ++ +W + Y HLG V ++
Sbjct: 123 TGSSGKSTTIIPANVSSYQRNLSTAALMERIPSRWPRPEWHAPWKNYRVIQGHLGWVRSV 182
Query: 377 TFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQ 436
F SN F T S D+++++W+ V +K H+ + +++ ++ + D Q
Sbjct: 183 AFDPSNEWFCTGSADRTIKIWDVATGV-LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQ 241
Query: 437 ILIYSTRERFQLNKKKR-FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF 495
+ + + NK R + GH+ +G C + P +++G + C WD ++
Sbjct: 242 VKCWDLEQ----NKVIRSYHGHL-SGVYC-LALHPTLDVLLTGGRDSVCRVWDIRTKMQI 295
Query: 496 RTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
L H+ P + +V T D IK+WD
Sbjct: 296 FALSGHDNTVCSVFTRPTDP-QVVTGSHDTTIKFWD 330
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 246 (91.7 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 66/267 (24%), Positives = 122/267 (45%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
GK + T+ GH + IS+ DG + S DK I+ W+ TG+ T G YV +
Sbjct: 208 GKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAI 267
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
K N+L++G D+ + WD+ + + + H V+ I V + + D
Sbjct: 268 -AFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGL 326
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-----RFQ- 447
+R+W+ ++ + + S+ PN ++ A +LD+ + ++ E +Q
Sbjct: 327 VRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQG 386
Query: 448 -LNKKKRFAGHI-VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 505
NKK +G V G + +P F +SG +G WD + KV + ++ H+GV
Sbjct: 387 HSNKKYSLSGAFGVYGQSIPGR-TPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVV 445
Query: 506 IGCEWHPLEQSK-VATCGWDGLIKYWD 531
+G + + + + +CG DG ++ W+
Sbjct: 446 LGVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 148 (57.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 51/221 (23%), Positives = 93/221 (42%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 341
GH + V + F D + + D +K W TG++I TF G + + ++ D
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFE-GHLAGISTISWSPDGAT 232
Query: 342 ILLAGMSDKKIVQWDMNT-KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
I +G DK I W++ T K + H V I F V+ S D+++ +W+
Sbjct: 233 IA-SGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVR 291
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
V+K + H + I + + +A+ + D + I+ T + R H
Sbjct: 292 SARVMKSLPA-HSDPVSGIDVVWDGTLIASCATDGLVRIWDT----STGQCLRTLVHEDN 346
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 501
V FSP+G++V++ + WD+ + +T + H
Sbjct: 347 PPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGH 387
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 41/174 (23%), Positives = 80/174 (45%)
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
V+ +PD +++ +G +D + W +T ++ ++ HL ++TI++ + SD
Sbjct: 182 VRFSPD---ASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSD 238
Query: 391 DKSLRVWEF--GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
DK++R+W G +I H + + +I+ P N L + S D + ++ R ++
Sbjct: 239 DKTIRLWNVLTGKAHPTPFIG--HHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSA-RV 295
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE 502
K V+G ++ DG + S +G WD + + RTL HE
Sbjct: 296 MKSLPAHSDPVSG----IDVVWDGTLIASCATDGLVRIWDTSTGQCLRTL-VHE 344
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 235 (87.8 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 63/248 (25%), Positives = 115/248 (46%)
Query: 273 HGKCMR--TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+G C T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G +V
Sbjct: 86 YGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLK-GHTSFV 144
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
P + G D + WD+ K + Q+ V ++TF D++ + ++
Sbjct: 145 NSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTF-QNTYQVLSVTFNDTSDQIISGGI 203
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D ++VW+ +I Y + H S+ +SL + ++L + S+DN + ++ R F +
Sbjct: 204 DNDIKVWDLRQNKLI-YSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRP-FAPKE 261
Query: 451 K--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
+ K F G H + ++S DG + +G + + WD + ++ L H G
Sbjct: 262 RCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVN 321
Query: 507 GCEWHPLE 514
+HP E
Sbjct: 322 EVAFHPEE 329
Score = 153 (58.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 57/261 (21%), Positives = 112/261 (42%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 339
GH V F +G ++ YD+ I W+ G ++T G V++L+ + D
Sbjct: 54 GHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDC-ENYATLKGHSGAVMELHYNTDG 111
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRVWE 398
++L + +DK + WD T E + H VN+ + T SDD ++++W+
Sbjct: 112 -SLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWD 170
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ + + + S++ + ++ + + +DN I ++ R+ +L + G
Sbjct: 171 IRKKASVHTFQ--NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQN-KLIYSMQGHGDS 227
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------C-KVFR-TLKCHEGVCIGCEW 510
V G ++ S DG +++S + WD + C K+F+ + E + C W
Sbjct: 228 VTG----LSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSW 283
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
+ SK+A D + WD
Sbjct: 284 SA-DGSKIAAGSADRFVYIWD 303
Score = 133 (51.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 55/229 (24%), Positives = 93/229 (40%)
Query: 266 VEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFST 324
V D T G+ ++ GH+ V G + T S D +K WD + TF
Sbjct: 125 VWDSET--GERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQN 182
Query: 325 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
V N D+ +++G D I WD+ ++ H +V ++
Sbjct: 183 TYQVLSVTFNDTSDQ---IISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSY 239
Query: 385 FVTSSDDKSLRVWEFGIPVVIKY----ISEPHMHSMPS----ISLHPNTNWLAAQSLDNQ 436
+++S D S+RVW+ P K I + ++H+ S + + +AA S D
Sbjct: 240 LLSNSMDNSVRVWDIR-PFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRF 298
Query: 437 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 485
+ I+ T R + K GH AG +V F P+ V+SG + + +
Sbjct: 299 VYIWDTTTRRIVYK---LPGH--AGSVNEVAFHPEEPIVLSGSSDKRLY 342
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 33/132 (25%), Positives = 60/132 (45%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKI--- 327
K + + GH +V +S DG+ L+ S D +++ WD + ++ F G +
Sbjct: 216 KLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQ-GNVHNF 274
Query: 328 -PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV 386
+++ + D I AG +D+ + WD T+ I + H G+VN + F +
Sbjct: 275 EKNLLRCSWSADGSKIA-AGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVL 333
Query: 387 TSSDDKSLRVWE 398
+ S DK L + E
Sbjct: 334 SGSSDKRLYIGE 345
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 235 (87.8 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 63/262 (24%), Positives = 125/262 (47%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
H C RT GH V DI++ +D ++AS DK +K ++ T ++ +T G YV
Sbjct: 118 HMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLK-GHNNYVFC 176
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
N + + +++++G D+ + WD+ T + H V+ ++F + S D
Sbjct: 177 CN-FNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDG 235
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK- 451
+R+W+ IK + + + + PN ++ A +LD+ + ++ F K
Sbjct: 236 LVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD----FSKGKTL 291
Query: 452 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
K++ GH + Y NFS G++++SG + K + W+ ++ ++ + L+ H + +
Sbjct: 292 KQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDC 351
Query: 511 HPLEQSKVATCGW--DGLIKYW 530
HP+ Q+ +A+ D I W
Sbjct: 352 HPV-QNIIASGALEPDNKIHIW 372
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/235 (24%), Positives = 107/235 (45%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
K M T GH+K++ F G K+L T+S DK +K W+ + RT + K+ V +
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCG-KYLGTSSADKTVKIWNMDHMICERTLTGHKLG-VNDI 135
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D + ++ A DK + +++ T +T+ H V F + V+ S D+S
Sbjct: 136 AWSSDSRCVVSAS-DDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR 453
+R+W+ + IK + H + ++S + + + +A+ S D + I+ T +
Sbjct: 195 VRIWDVKTGMCIKTLPA-HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD 253
Query: 454 FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG--VCI 506
VA V FSP+G+++++ + + WD+ K + HE CI
Sbjct: 254 DENPPVAF----VKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI 304
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/185 (22%), Positives = 85/185 (45%)
Query: 348 SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKY 407
+DK + W+M+ + H VN I + +R V++SDDK+L+++E + K
Sbjct: 107 ADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKT 166
Query: 408 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 467
+ + H + + + +P ++ + + S D + I+ + + K H + V+
Sbjct: 167 L-KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI---KTLPAH--SDPVSAVS 220
Query: 468 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG-CEWHPLEQSKVATCGWDGL 526
F+ DG + SG +G WD + + +TL E + ++ P + +A+ D
Sbjct: 221 FNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS-NLDST 279
Query: 527 IKYWD 531
+K WD
Sbjct: 280 LKLWD 284
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 235 (87.8 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 63/262 (24%), Positives = 125/262 (47%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
H C RT GH V DI++ +D ++AS DK +K ++ T ++ +T G YV
Sbjct: 118 HMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLK-GHNNYVFC 176
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
N + + +++++G D+ + WD+ T + H V+ ++F + S D
Sbjct: 177 CN-FNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDG 235
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK- 451
+R+W+ IK + + + + PN ++ A +LD+ + ++ F K
Sbjct: 236 LVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD----FSKGKTL 291
Query: 452 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
K++ GH + Y NFS G++++SG + K + W+ ++ ++ + L+ H + +
Sbjct: 292 KQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDC 351
Query: 511 HPLEQSKVATCGW--DGLIKYW 530
HP+ Q+ +A+ D I W
Sbjct: 352 HPV-QNIIASGALEPDNKIHIW 372
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/235 (24%), Positives = 107/235 (45%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
K M T GH+K++ F G K+L T+S DK +K W+ + RT + K+ V +
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCG-KYLGTSSADKTVKIWNMDHMICERTLTGHKLG-VNDI 135
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D + ++ A DK + +++ T +T+ H V F + V+ S D+S
Sbjct: 136 AWSSDSRCVVSAS-DDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR 453
+R+W+ + IK + H + ++S + + + +A+ S D + I+ T +
Sbjct: 195 VRIWDVKTGMCIKTLPA-HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD 253
Query: 454 FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG--VCI 506
VA V FSP+G+++++ + + WD+ K + HE CI
Sbjct: 254 DENPPVAF----VKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI 304
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/185 (22%), Positives = 85/185 (45%)
Query: 348 SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKY 407
+DK + W+M+ + H VN I + +R V++SDDK+L+++E + K
Sbjct: 107 ADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKT 166
Query: 408 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 467
+ + H + + + +P ++ + + S D + I+ + + K H + V+
Sbjct: 167 L-KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI---KTLPAH--SDPVSAVS 220
Query: 468 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG-CEWHPLEQSKVATCGWDGL 526
F+ DG + SG +G WD + + +TL E + ++ P + +A+ D
Sbjct: 221 FNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS-NLDST 279
Query: 527 IKYWD 531
+K WD
Sbjct: 280 LKLWD 284
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 230 (86.0 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 59/210 (28%), Positives = 99/210 (47%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
+ H+ VR + FC+DG F+TAS DK IK W T + + + S I +V K +PD
Sbjct: 130 FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQ-HINWVRCAKFSPDG 188
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++++ DK + WD ++E Y +H G V + F S + D +++VW
Sbjct: 189 ---RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW 245
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ ++++ + H ++ ++S HP+ N+L S D+ + I E L GH
Sbjct: 246 DVRTHRLLQHY-QLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYT---LHGH 301
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
G A V FS G + SG + + W
Sbjct: 302 --QGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/254 (21%), Positives = 105/254 (41%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R + GH AV + F + + + S D + W + F TG V +N
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRF-TGHKDAVTCVN-FS 101
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++L +G DK + W N K + + H V ++ F + FVT+SDDK+++VW
Sbjct: 102 PSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 161
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ +S+ H++ + P+ + + S D + ++ R ++ + H
Sbjct: 162 STHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS---YCEH 217
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 517
G+ V+F P G V + + WD ++ ++ + + H +HP +
Sbjct: 218 --GGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNY 274
Query: 518 VATCGWDGLIKYWD 531
+ T D +K D
Sbjct: 275 LVTASSDSTLKILD 288
Score = 173 (66.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 45/175 (25%), Positives = 80/175 (45%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKI 327
ST K + + H VR F DG ++AS DK +K WD + + + ++ G +
Sbjct: 162 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 221
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVT 387
YV +P + AGM D + WD+ T + Q Y H AVN ++F S VT
Sbjct: 222 TYV-DFHPSGTC--VAAAGM-DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 277
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
+S D +L++ + + + Y H +++ + A+ D Q++++ +
Sbjct: 278 ASSDSTLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 331
Score = 169 (64.5 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 52/225 (23%), Positives = 95/225 (42%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDD 338
+ GH AV ++F G + S DK ++ W G+ T V ++ D
Sbjct: 88 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGE--STVFRAHTATVRSVHFCSD 145
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
Q+ + A DK I W + ++ QH+ V F R V++SDDK++++W+
Sbjct: 146 GQSFVTAS-DDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ E H + + HP+ +AA +DN + ++ R L + + H
Sbjct: 205 KTSRECVHSYCE-HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLL---QHYQLHS 260
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
A A ++F P G ++++ + D ++ TL H+G
Sbjct: 261 AAVNA--LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQG 303
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 28/131 (21%), Positives = 51/131 (38%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKL 333
+C+ +Y H V + F GT A D +K WD T ++++ + +
Sbjct: 209 ECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 268
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+P N L+ SD + D+ + H G T+ F + F + D+
Sbjct: 269 HPSG---NYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ 325
Query: 394 LRVWEFGIPVV 404
+ VW+ V+
Sbjct: 326 VMVWKSNFDVI 336
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 230 (86.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 58/210 (27%), Positives = 99/210 (47%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
+ H+ VR + FC+DG F+TAS DK +K W T + + + S I +V K +PD
Sbjct: 99 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCAKFSPDG 157
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++++ DK + WD ++E Y +H G V + F S + D +++VW
Sbjct: 158 ---RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ ++++ + H ++ ++S HP+ N+L S D+ + I E L GH
Sbjct: 215 DVRTHRLLQHY-QLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYT---LHGH 270
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
G A V FS G + SG + + W
Sbjct: 271 --QGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 53/255 (20%), Positives = 105/255 (41%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPD 336
R + GH AV + F + + + S D + W + F+ K V +P
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++L +G DK + W N K + + H V ++ F + FVT+SDDK+++V
Sbjct: 73 G---HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W + +S+ H++ + P+ + + S D + ++ R ++ +
Sbjct: 130 WSTHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS---YCE 185
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS 516
H G+ V+F P G + + + WD ++ ++ + + H +HP +
Sbjct: 186 H--GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGN 242
Query: 517 KVATCGWDGLIKYWD 531
+ T D +K D
Sbjct: 243 YLVTASSDSTLKILD 257
Score = 174 (66.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 46/175 (26%), Positives = 80/175 (45%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKI 327
ST K + + H VR F DG ++AS DK +K WD + + + ++ G +
Sbjct: 131 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVT 387
YV +P I AGM D + WD+ T + Q Y H AVN ++F S VT
Sbjct: 191 TYV-DFHPSGTC--IAAAGM-DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 246
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
+S D +L++ + + + Y H +++ + A+ D Q++++ +
Sbjct: 247 ASSDSTLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 170 (64.9 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 51/225 (22%), Positives = 95/225 (42%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDD 338
+ GH AV ++F G + S DK ++ W G+ T V ++ D
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD 114
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
Q+ + A DK + W + ++ QH+ V F R V++SDDK++++W+
Sbjct: 115 GQSFVTAS-DDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ E H + + HP+ +AA +DN + ++ R L + + H
Sbjct: 174 KTSRECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLL---QHYQLHS 229
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
A A ++F P G ++++ + D ++ TL H+G
Sbjct: 230 AAVNA--LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 28/131 (21%), Positives = 51/131 (38%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKL 333
+C+ +Y H V + F GT A D +K WD T ++++ + +
Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 237
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+P N L+ SD + D+ + H G T+ F + F + D+
Sbjct: 238 HPSG---NYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ 294
Query: 394 LRVWEFGIPVV 404
+ VW+ +V
Sbjct: 295 VMVWKSNFDIV 305
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 227 (85.0 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 58/210 (27%), Positives = 99/210 (47%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
+ H+ VR + FC+DG F+TAS DK +K W T + + + S I +V K +PD
Sbjct: 61 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HINWVRCAKFSPDG 119
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++++ DK + WD +++E Y +H G V + F S + D +++VW
Sbjct: 120 ---RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 176
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ ++++ + H ++ +S HP+ N+L S D+ + I E L GH
Sbjct: 177 DVRTHRLLQHY-QLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYT---LHGH 232
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
G A V FS G + SG + + W
Sbjct: 233 --QGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 169 (64.5 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 44/175 (25%), Positives = 80/175 (45%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKI 327
+T K + + H VR F DG ++AS DK +K WD + + + ++ G +
Sbjct: 93 ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFV 152
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVT 387
YV +P I AGM D + WD+ T + Q Y H AVN ++F S +T
Sbjct: 153 TYV-DFHPSGTC--IAAAGM-DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLIT 208
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
+S D +L++ + + + Y H +++ + A+ D Q++++ +
Sbjct: 209 ASSDSTLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 262
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDD 338
+ GH AV ++F G + S DK ++ W G+ T V ++ D
Sbjct: 19 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD 76
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
Q+ + A DK + W + ++ QH+ V F R V++SDDK++++W+
Sbjct: 77 GQSFVTAS-DDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 135
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ E H + + HP+ +AA +DN + ++ R +L + +
Sbjct: 136 KSSRECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH-RLLQHYQLHSAA 193
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
V G ++F P G ++++ + D ++ TL H+G
Sbjct: 194 VNG----LSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQG 234
Score = 156 (60.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 41/191 (21%), Positives = 84/191 (43%)
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
++L +G DK + W N K + + H V ++ F + FVT+SDDK+++VW
Sbjct: 36 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATH 95
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ +S+ H++ + P+ + + S D + ++ R ++ + H
Sbjct: 96 RQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHS---YCEH--G 149
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G+ V+F P G + + + WD ++ ++ + + H G +HP + + T
Sbjct: 150 GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNYLIT 208
Query: 521 CGWDGLIKYWD 531
D +K D
Sbjct: 209 ASSDSTLKILD 219
Score = 151 (58.2 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 44/186 (23%), Positives = 78/186 (41%)
Query: 349 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVI--K 406
D ++ W M + + H AV + F S + S DK++R+W +P V
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW---VPNVKGES 58
Query: 407 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST-RERFQLNKKKRFAGHIVAGYACQ 465
+ H ++ S+ + S D + +++T R++F + + HI +
Sbjct: 59 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ----HI--NWVRC 112
Query: 466 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDG 525
FSPDGR ++S + WD S + + H G ++HP + +A G D
Sbjct: 113 AKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHP-SGTCIAAAGMDN 171
Query: 526 LIKYWD 531
+K WD
Sbjct: 172 TVKVWD 177
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 31/138 (22%), Positives = 55/138 (39%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
DKS+ +C+ +Y H V + F GT A D +K WD T ++++ +
Sbjct: 135 DKSS--RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSA 192
Query: 328 PYV-VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV 386
+ +P N L+ SD + D+ + H G T+ F + F
Sbjct: 193 AVNGLSFHPSG---NYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 249
Query: 387 TSSDDKSLRVWEFGIPVV 404
+ D+ + VW+ +V
Sbjct: 250 SGGSDEQVMVWKSNFDIV 267
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 226 (84.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 60/232 (25%), Positives = 109/232 (46%)
Query: 273 HGKC--MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+G C T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G +V
Sbjct: 97 YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTSFV 155
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
P ++ G D + WD+ K Q + Q+ V +TF D++ + ++
Sbjct: 156 NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGI 214
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R F +
Sbjct: 215 DNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAPKE 272
Query: 451 K--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498
+ K F G H + ++SPDG + +G + + + W S V R+L
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADS--FLYPWHSLSV-RSL 321
Score = 153 (58.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 58/260 (22%), Positives = 114/260 (43%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 339
GH V F +G+ +A +D+ I W G ++T G V++L+ + D
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWSVY-GDC-DNYATLKGHSGAVMELHYNTDG 122
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRVWE 398
++L + +DK + WD T E + H VN+ + V T SDD ++++W+
Sbjct: 123 -SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I+ + + + +++ + ++ + + +DN I ++ R+ +L R GH
Sbjct: 182 IRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMR--GH- 235
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------C-KVFR-TLKCHEGVCIGCEW 510
A ++ S +G +++S + WD + C K+F+ + E + C W
Sbjct: 236 -ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 511 HPLEQSKVATCGWDGLIKYW 530
P + SK+A D + W
Sbjct: 295 SP-DGSKIAAGSADSFLYPW 313
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 222 (83.2 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 59/211 (27%), Positives = 99/211 (46%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS-TGKIPYV--VKLNPD 336
+ H+ VR + FC+DG +TAS DK +K W T + + FS T I +V K +PD
Sbjct: 99 FRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFL--FSLTQHINWVRCAKFSPD 156
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++++ DK + WD ++E Y +H G V + F S + D +++V
Sbjct: 157 G---RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 213
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W+ ++++ + H ++ ++S HP+ N+L S D+ + I E L G
Sbjct: 214 WDTRTHRLVQHY-QLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYT---LHG 269
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
H G A V FS G + SG + + W
Sbjct: 270 H--QGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 171 (65.3 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 51/225 (22%), Positives = 95/225 (42%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDD 338
+ GH AV ++F G + S DK ++ W G+ T V ++ D
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD 114
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
Q +L+ DK + W + + QH+ V F R V++SDDK++++W+
Sbjct: 115 GQ-LLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ E H + + HP+ +AA +DN + ++ TR + + + H
Sbjct: 174 KTSRECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLV---QHYQLHS 229
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
A A ++F P G ++++ + D ++ TL H+G
Sbjct: 230 AAVNA--LSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 169 (64.5 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 44/175 (25%), Positives = 79/175 (45%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKI 327
ST + + + H VR F DG ++AS DK +K WD + + + ++ G +
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVT 387
YV +P I AGM D + WD T + Q Y H AVN ++F S +T
Sbjct: 191 TYV-DFHPSGTC--IAAAGM-DNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLIT 246
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
+S D +L++ + + + Y H +++ + A+ D Q++++ +
Sbjct: 247 ASSDSTLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 166 (63.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 52/254 (20%), Positives = 103/254 (40%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R + GH AV + F + + S D + W + F TG V +N
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF-TGHKDAVTCVN-FS 70
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++L +G DK + W N K + + H V ++ F + VT+SDDK+++VW
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ +++ H++ + P+ + + S D + ++ R ++ + H
Sbjct: 131 STHRQRFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS---YCEH 186
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 517
G+ V+F P G + + + WD ++ ++ + + H +HP +
Sbjct: 187 --GGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHP-SGNY 243
Query: 518 VATCGWDGLIKYWD 531
+ T D +K D
Sbjct: 244 LITASSDSTLKILD 257
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 29/131 (22%), Positives = 51/131 (38%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKL 333
+C+ +Y H V + F GT A D +K WDT T ++++ + +
Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSF 237
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+P N L+ SD + D+ + H G T+ F + F + D+
Sbjct: 238 HPSG---NYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ 294
Query: 394 LRVWEFGIPVV 404
+ VW+ V
Sbjct: 295 VMVWKSNFDTV 305
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 227 (85.0 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 58/210 (27%), Positives = 99/210 (47%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
+ H+ VR + FC+DG F+TAS DK +K W T + + + S I +V K +PD
Sbjct: 99 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HINWVRCAKFSPDG 157
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++++ DK + WD +++E Y +H G V + F S + D +++VW
Sbjct: 158 ---RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ ++++ + H ++ +S HP+ N+L S D+ + I E L GH
Sbjct: 215 DVRTHRLLQHY-QLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYT---LHGH 270
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
G A V FS G + SG + + W
Sbjct: 271 --QGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 181 (68.8 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 55/254 (21%), Positives = 106/254 (41%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R + GH AV + F + + + S D + W + F TG V +N
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRF-TGHKDAVTCVN-FS 70
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++L +G DK + W N K + + H V ++ F + FVT+SDDK+++VW
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ +S+ H++ + P+ + + S D + ++ R ++ + H
Sbjct: 131 ATHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHS---YCEH 186
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 517
G+ V+F P G + + + WD ++ ++ + + H G +HP +
Sbjct: 187 --GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNY 243
Query: 518 VATCGWDGLIKYWD 531
+ T D +K D
Sbjct: 244 LITASSDSTLKILD 257
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 44/175 (25%), Positives = 80/175 (45%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKI 327
+T K + + H VR F DG ++AS DK +K WD + + + ++ G +
Sbjct: 131 ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFV 190
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVT 387
YV +P I AGM D + WD+ T + Q Y H AVN ++F S +T
Sbjct: 191 TYV-DFHPSGTC--IAAAGM-DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLIT 246
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
+S D +L++ + + + Y H +++ + A+ D Q++++ +
Sbjct: 247 ASSDSTLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 167 (63.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDD 338
+ GH AV ++F G + S DK ++ W G+ T V ++ D
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD 114
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
Q+ + A DK + W + ++ QH+ V F R V++SDDK++++W+
Sbjct: 115 GQSFVTAS-DDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ E H + + HP+ +AA +DN + ++ R +L + +
Sbjct: 174 KSSRECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH-RLLQHYQLHSAA 231
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
V G ++F P G ++++ + D ++ TL H+G
Sbjct: 232 VNG----LSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 31/138 (22%), Positives = 55/138 (39%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
DKS+ +C+ +Y H V + F GT A D +K WD T ++++ +
Sbjct: 173 DKSS--RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSA 230
Query: 328 PYV-VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV 386
+ +P N L+ SD + D+ + H G T+ F + F
Sbjct: 231 AVNGLSFHPSG---NYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
Query: 387 TSSDDKSLRVWEFGIPVV 404
+ D+ + VW+ +V
Sbjct: 288 SGGSDEQVMVWKSNFDIV 305
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 154 (59.3 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 272 FHG-KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
F G +C+RT GH V ++ +G ++AS DK IK W+ +TG ++TF TG +V
Sbjct: 11 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWV 69
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITF 378
+ P+ D L+A S+ + V+ W + TKE E +H V I++
Sbjct: 70 RMVRPNQD--GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 116
Score = 113 (44.8 bits), Expect = 0.00040, P = 0.00040
Identities = 39/170 (22%), Positives = 72/170 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G C++T+ GH + VR + DGT + S D+ ++ W T + + +VV+
Sbjct: 56 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE--HVVEC 113
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
I A S + E T H V + F + ++ +DDK+
Sbjct: 114 --------ISWAPESSYSSIS------EATGSEVGHDNWVRGVLFHSGGKFILSCADDKT 159
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
LRVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 160 LRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 208
Score = 92 (37.4 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 32/127 (25%), Positives = 54/127 (42%)
Query: 303 SYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTK 360
S D IK WD + + IRT G V V + P+ D +++ DK I W++ T
Sbjct: 1 SADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKMWEVQTG 56
Query: 361 EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS 420
+ + H V + + S+D+++RVW + E H H + IS
Sbjct: 57 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECIS 115
Query: 421 LHPNTNW 427
P +++
Sbjct: 116 WAPESSY 122
Score = 78 (32.5 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 466 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDG 525
V F G+F++S + WD+K+ + +TL HE ++H V T D
Sbjct: 142 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQ 200
Query: 526 LIKYWD 531
+K W+
Sbjct: 201 TVKVWE 206
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 154 (59.3 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 272 FHG-KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
F G +C+RT GH V ++ +G ++AS DK IK W+ +TG ++TF TG +V
Sbjct: 8 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWV 66
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITF 378
+ P+ D L+A S+ + V+ W + TKE E +H V I++
Sbjct: 67 RMVRPNQD--GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 113
Score = 113 (44.8 bits), Expect = 0.00038, P = 0.00038
Identities = 39/170 (22%), Positives = 72/170 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G C++T+ GH + VR + DGT + S D+ ++ W T + + +VV+
Sbjct: 53 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE--HVVEC 110
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
I A S + E T H V + F + ++ +DDK+
Sbjct: 111 --------ISWAPESSYSSIS------EATGSEVGHDNWVRGVLFHSGGKFILSCADDKT 156
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
LRVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 157 LRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 205
Score = 85 (35.0 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 30/122 (24%), Positives = 52/122 (42%)
Query: 308 IKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE 365
IK WD + + IRT G V V + P+ D +++ DK I W++ T +
Sbjct: 3 IKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKMWEVQTGYCVKT 58
Query: 366 YDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNT 425
+ H V + + S+D+++RVW + E H H + IS P +
Sbjct: 59 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPES 117
Query: 426 NW 427
++
Sbjct: 118 SY 119
Score = 78 (32.5 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 466 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDG 525
V F G+F++S + WD+K+ + +TL HE ++H V T D
Sbjct: 139 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQ 197
Query: 526 LIKYWD 531
+K W+
Sbjct: 198 TVKVWE 203
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 221 (82.9 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 57/236 (24%), Positives = 101/236 (42%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 341
GHS AV + F DG+ T S DK + +WD TGQ R F G +V + Q
Sbjct: 96 GHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFK-GHGNFVNSVQGSRRGQQ 154
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
+L +G D+ I WD K + V + F D+ + ++ D +++W+
Sbjct: 155 LLCSGSDDRTIKIWDARKKHAAHTLESPF-QVTAVCFGDTGEQVISGGIDNEVKIWDIRK 213
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAGHI-- 458
V+ ++ H ++ +SL P +++ ++DN + ++ R + K F GH
Sbjct: 214 QAVLHHL-RGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHN 272
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
+ +SP + SG + + WD + ++ L H G ++ P E
Sbjct: 273 FEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKE 328
Score = 144 (55.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 53/260 (20%), Positives = 112/260 (43%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDT-ETGQVIRTFSTGKIPYVVKLNPDDDKQ 340
GH + F +G L++ +D+ I W E + + S G V++ + D
Sbjct: 53 GHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMS-GHSGAVMEAHFTPDGS 111
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS-SDDKSLRVWEF 399
+I +DK + WD+ T + + + H VN++ ++ + S SDD+++++W+
Sbjct: 112 HIFTCS-TDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDA 170
Query: 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459
+ P + ++ + + +DN++ I+ R++ L+ + GH
Sbjct: 171 RKKHAAHTLESPFQ--VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLR---GH-- 223
Query: 460 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------C-KVFRTLKCH-EGVCIGCEWH 511
+ ++ SP+G F+++ + WD + C KVF+ + + E + C W
Sbjct: 224 SDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWS 283
Query: 512 PLEQSKVATCGWDGLIKYWD 531
P K+ + D + WD
Sbjct: 284 P-GSDKITSGSADRHVYIWD 302
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 49/218 (22%), Positives = 87/218 (39%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
G+ R + GH V + G + L + S D+ IK WD T + P+ V
Sbjct: 130 GQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLES---PFQVT 186
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
D +++G D ++ WD+ + + H + ++ +T++ D
Sbjct: 187 AVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDN 246
Query: 393 SLRVWEFGIPVV-----IKYISEPHMHSMPSISLH----PNTNWLAAQSLDNQILIYSTR 443
+LRVW+ P +K + + H H+ L P ++ + + S D + I+
Sbjct: 247 TLRVWDVR-PYAPGERCVK-VFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVN 304
Query: 444 ERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE 481
R L K GH G V+FSP ++SG +
Sbjct: 305 TRRILYK---LPGH--NGSVNAVDFSPKEPLILSGSSD 337
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET---GQ-VIRTFSTGKIPYVVKL---- 333
GHS + +S +G LT + D ++ WD G+ ++ F + + L
Sbjct: 222 GHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCA 281
Query: 334 -NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
+P DK + +G +D+ + WD+NT+ I + H G+VN + F ++ S DK
Sbjct: 282 WSPGSDK---ITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDK 338
Query: 393 SLRVWE 398
+L + E
Sbjct: 339 TLYLGE 344
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 224 (83.9 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 57/210 (27%), Positives = 99/210 (47%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
+ H+ VR + FC+DG +TAS DK +K W T + + + S I +V + +PD
Sbjct: 99 FRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCARFSPDG 157
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++++ DK + WD ++E Y +H G V + F S +S D +++VW
Sbjct: 158 ---RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVW 214
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ ++++ + H ++ ++S HP+ N+L S D+ + I E L GH
Sbjct: 215 DVRTHRLLQHY-QLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYT---LHGH 270
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
G A V FS G + SG + + W
Sbjct: 271 --QGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 52/225 (23%), Positives = 97/225 (43%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDD 338
+ GH AV ++F G + S DK ++ W G+ T V ++ D
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGE--STVFRAHTATVRSVHFCSD 114
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
Q+++ A DK + W + ++ QH+ V F R V++SDDK++++W+
Sbjct: 115 GQSLVTAS-DDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD 173
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ E H + + HP+ +AA S+DN + ++ R L + + H
Sbjct: 174 KTSRECVHSYCE-HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLL---QHYQLHS 229
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
A A ++F P G ++++ + D ++ TL H+G
Sbjct: 230 AAVNA--LSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 170 (64.9 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 51/255 (20%), Positives = 104/255 (40%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPD 336
R + GH A+ + F + + + S D + W + F+ K V +P
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPS 72
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++L +G DK + W N K + + H V ++ F + VT+SDDK+++V
Sbjct: 73 G---HLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKV 129
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W + +S+ H++ + P+ + + S D + ++ R ++ +
Sbjct: 130 WSTHRQKFLFSLSQ-HINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHS---YCE 185
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS 516
H G+ V+F P G + + + WD ++ ++ + + H +HP +
Sbjct: 186 H--GGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGN 242
Query: 517 KVATCGWDGLIKYWD 531
+ T D +K D
Sbjct: 243 YLLTASSDSTLKILD 257
Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 42/175 (24%), Positives = 78/175 (44%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKI 327
ST K + + H VR F DG ++AS DK +K WD + + + ++ G +
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVT 387
YV +P + A D + WD+ T + Q Y H AVN ++F S +T
Sbjct: 191 TYV-DFHPSG---TCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLT 246
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
+S D +L++ + + + Y H +++ + A+ D Q++++ +
Sbjct: 247 ASSDSTLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 34/145 (23%), Positives = 57/145 (39%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKL 333
+C+ +Y H V + F GT AS D +K WD T ++++ + +
Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 237
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+P N LL SD + D+ + H G T+ F + F + D+
Sbjct: 238 HPSG---NYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ 294
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPS 418
+ VW+ VV Y +H P+
Sbjct: 295 VMVWKSNFDVV-DYREVIKVHRPPA 318
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 227 (85.0 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 64/264 (24%), Positives = 115/264 (43%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
D + C++ GH AV +S+ +D +AS D+ +K WDTETG + T G
Sbjct: 280 DVANHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLE-GHS 338
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVT 387
V + D + LLA SD + WD T + + H V ++ F ++ +
Sbjct: 339 DLVRSVIFSHDSR--LLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLAS 396
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
+SDD ++++W+ G +++ E H + S+ ++ LA+ S D+ + I+ T
Sbjct: 397 ASDDSTVKIWDTGTGS-LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG-- 453
Query: 448 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
+ + GH + V FS D R + S + WD + TL+ H +
Sbjct: 454 -SLQHTLEGH--RDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTS 510
Query: 508 CEWHPLEQSKVATCGWDGLIKYWD 531
+ + +A+ D ++ WD
Sbjct: 511 VSFSH-DSRLLASASNDQTVRIWD 533
Score = 188 (71.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 51/173 (29%), Positives = 79/173 (45%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G T GH VR + F +D +AS D +K WDT TG + T G +V +
Sbjct: 369 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLE-GHRDWVRSV 427
Query: 334 NPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
D Q LLA SD V+ WD T + + H V ++ F +R ++SDD+
Sbjct: 428 IFSHDSQ--LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDR 485
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445
++R+W+ K+ E H + S+S ++ LA+ S D + I+ R
Sbjct: 486 TVRIWDTE-KGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEAR 537
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 59/211 (27%), Positives = 99/211 (46%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS-TGKIPYV--VKLNPD 336
+ H+ VR + FC+DG +TAS DK +K W T + + FS T I +V K +PD
Sbjct: 99 FRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFL--FSLTQHINWVRCAKFSPD 156
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++++ DK + WD ++E Y +H G V + F S + D +++V
Sbjct: 157 G---RLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 213
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W+ ++++ + H ++ ++S HP+ N+L S D+ + I E L G
Sbjct: 214 WDARTHRLLQHY-QLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYT---LHG 269
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
H G A V FS G + SG + + W
Sbjct: 270 H--QGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 171 (65.3 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 52/225 (23%), Positives = 95/225 (42%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDD 338
+ GH AV ++F G + S DK ++ W G+ T V ++ D
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD 114
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
Q+++ A DK + W + + QH+ V F R V++SDDK++++W+
Sbjct: 115 GQSLVTAS-DDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I E H + + HP+ +AA +DN + ++ R L + + H
Sbjct: 174 KTSRECIHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLL---QHYQLHS 229
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
A A ++F P G ++++ + D ++ TL H+G
Sbjct: 230 AAVNA--LSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 45/175 (25%), Positives = 79/175 (45%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKI 327
ST + + + H VR F DG ++AS DK +K WD + + I ++ G +
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFV 190
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVT 387
YV +P I AGM D + WD T + Q Y H AVN ++F S +T
Sbjct: 191 TYV-DFHPSGTC--IAAAGM-DNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLIT 246
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
+S D +L++ + + + Y H +++ + A+ D Q++++ +
Sbjct: 247 ASSDSTLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 52/254 (20%), Positives = 103/254 (40%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R + GH AV + F + + S D + W + F TG V +N
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF-TGHKDAVTCVN-FS 70
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++L +G DK + W N K + + H V ++ F + VT+SDDK+++VW
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ +++ H++ + P+ + + S D + ++ R ++ + H
Sbjct: 131 STHRQRFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHS---YCEH 186
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 517
G+ V+F P G + + + WD ++ ++ + + H +HP +
Sbjct: 187 --GGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP-SGNY 243
Query: 518 VATCGWDGLIKYWD 531
+ T D +K D
Sbjct: 244 LITASSDSTLKILD 257
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 28/131 (21%), Positives = 51/131 (38%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKL 333
+C+ +Y H V + F GT A D +K WD T ++++ + +
Sbjct: 178 ECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSF 237
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+P N L+ SD + D+ + H G T+ F + F + D+
Sbjct: 238 HPSG---NYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ 294
Query: 394 LRVWEFGIPVV 404
+ VW+ +V
Sbjct: 295 VMVWKSNFDIV 305
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 214 (80.4 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 64/228 (28%), Positives = 106/228 (46%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
+ H+ VR + F +DG +TAS DK IK W + + + S I +V + +PD
Sbjct: 100 FKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQ-HINWVRCARFSPDG 158
Query: 338 DKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
L+A SD K V+ WD ++E + +H G N + F S + DK+++V
Sbjct: 159 R----LIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKV 214
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W+ + ++++ + H ++ S+S HP+ N+L S D+ + I E L G
Sbjct: 215 WDVRMNRLLQHY-QVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYT---LHG 270
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFW--DWKSCKVFRTLKCHE 502
H G A V FS G F SG + + W ++ + LK H+
Sbjct: 271 H--QGPATCVAFSRTGDFFASGGSDEQVMVWKTNFSAADYDGVLKTHK 316
Score = 172 (65.6 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 54/256 (21%), Positives = 107/256 (41%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNP 335
R + GH A+ + F + + + S D +K W + Q+ G V V+ +P
Sbjct: 14 RHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKP-QMRAYCLVGHKDAVMCVQFSP 72
Query: 336 DDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLR 395
+++ +G DK + W + K + + H V ++ F + VT+SDDK+++
Sbjct: 73 SG---HLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIK 129
Query: 396 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 455
VW + +S+ H++ + P+ +A+ S D + ++ R ++ F
Sbjct: 130 VWTVHRQKFLFSLSQ-HINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHS---FC 185
Query: 456 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 515
H G+A V F P G + + + WD + ++ + + H +HP
Sbjct: 186 EH--GGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHP-SG 242
Query: 516 SKVATCGWDGLIKYWD 531
+ + T D +K D
Sbjct: 243 NYLITASNDSTLKILD 258
Score = 162 (62.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 54/235 (22%), Positives = 96/235 (40%)
Query: 277 MRTY--MGHSKAVRDISFCNDGTKFLTASYDKNIKYW-DTETGQVIRTFSTGKIPYVVKL 333
MR Y +GH AV + F G + S DK + W + G+ T V +
Sbjct: 53 MRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGE--STVFKAHTATVRSV 110
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+ D Q+++ A DK I W ++ ++ QH+ V F R ++SDDK+
Sbjct: 111 HFSSDGQSLVTAS-DDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKT 169
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR 453
+++W+ I E H + HP+ +AA D + ++ R L +
Sbjct: 170 VKLWDKTSRECIHSFCE-HGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLL---QH 225
Query: 454 FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG--VCI 506
+ H A ++F P G ++++ + D ++ TL H+G C+
Sbjct: 226 YQVHTAA--VNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCV 278
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 217 (81.4 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 75/264 (28%), Positives = 119/264 (45%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPD 336
T GH VR ++ N T +A DK +K WD E +VIR++ G + Y + L+P
Sbjct: 207 TLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYH-GHLHGVYCLALHPT 265
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYD-QHLGAVNTITFVDSNRRFVTSSDDKSLR 395
D ++L G D WD+ TK Q + H V ++ ++ + +T S D +++
Sbjct: 266 LD---VVLTGGRDSVCRVWDIRTK--MQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIK 320
Query: 396 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 455
W+ + I+ H ++ +++LHP N + S DN I +S + +
Sbjct: 321 FWDLRYGKSMATITN-HKKTVRAMALHPKENDFVSASADN-IKKFSLPKGEFCHNMLSLQ 378
Query: 456 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFR---------TLKCHEGVCI 506
I+ A VN DG V GD +G WFWDWKS F+ +L+ G+
Sbjct: 379 RDIINAVA--VN--EDGVMVTGGD-KGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYA 433
Query: 507 GCEWHPLEQSKVATCGWDGLIKYW 530
C + S++ TC D IK W
Sbjct: 434 AC--YDQTGSRLVTCEGDKTIKMW 455
Score = 155 (59.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 47/169 (27%), Positives = 71/169 (42%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
K R GH VR ++F F T S D+ IK WD TG V++ TG I V L
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG-VLKLTLTGHIGQVRGLA 219
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
+ + AG DK++ WD+ ++ + Y HL V + + +T D
Sbjct: 220 VSNRHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVC 278
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
RVW+ + I + PH + S+ P + S D+ I + R
Sbjct: 279 RVWDIRTKMQIFVL--PHDSDVFSVLARPTDPQVITGSHDSTIKFWDLR 325
Score = 126 (49.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 39/164 (23%), Positives = 73/164 (44%)
Query: 369 HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 428
HLG V ++ F SN F T S D+++++W+ V +K H+ + +++ ++
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGV-LKLTLTGHIGQVRGLAVSNRHTYM 227
Query: 429 AAQSLDNQILIYSTRERFQLNKKKR-FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
+ D Q+ + + NK R + GH+ Y ++ + D V++G + C W
Sbjct: 228 FSAGDDKQVKCWDLEQ----NKVIRSYHGHLHGVYCLALHPTLD--VVLTGGRDSVCRVW 281
Query: 488 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
D ++ L H+ P + +V T D IK+WD
Sbjct: 282 DIRTKMQIFVLP-HDSDVFSVLARPTDP-QVITGSHDSTIKFWD 323
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 218 (81.8 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 64/263 (24%), Positives = 124/263 (47%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-----STGKIPYV--VKLNP 335
H+ V ++F NDG K+L +++ + +D +TG+ + F G + Y+ V +P
Sbjct: 280 HNSVVCCVNFSNDG-KYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDL-YIRSVCFSP 337
Query: 336 DDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLR 395
D N L G DK + WD++TK+I + H + ++ + R V+ S DK +
Sbjct: 338 DG---NYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAK 394
Query: 396 VWEFGIPVVIKYISEPHM---HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
+W+ + + + + S+++ P+ +AA SLDN + ++ + + L +
Sbjct: 395 IWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFL---E 451
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK----VFRTLKCHEGVCIGC 508
R+ GH+ + Y+ V FSPDG+ + SG + WD + T H+ +
Sbjct: 452 RYEGHLDSVYS--VAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSV 509
Query: 509 EWHPLEQSKVATCGWDGLIKYWD 531
+ P + S + + D +++WD
Sbjct: 510 AFSP-DGSWLISGSKDRSVQFWD 531
Score = 213 (80.0 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 64/251 (25%), Positives = 113/251 (45%)
Query: 287 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAG 346
+R + F DG T + DK +K WD T ++ TF ++ + L+ D + +++G
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELD-IYSLDYSSDGR-FIVSG 387
Query: 347 MSDKKIVQWDMNTKEITQEY-DQHLGAVNTITFV--DSNRRFVTSSD-DKSLRVWEFGIP 402
DKK WD+ + ++ +G N +T V + R V + D +R+W+
Sbjct: 388 SGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTG 447
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS-TRERFQLNKKKRFAGHIVAG 461
++ E H+ S+ S++ P+ LA+ SLD + ++ + R + + F GH
Sbjct: 448 YFLERY-EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGH--KD 504
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK--VA 519
+ V FSPDG +++SG + FWD ++ L+ H+ I P S A
Sbjct: 505 FVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFA 564
Query: 520 TCGWDGLIKYW 530
T D + W
Sbjct: 565 TGSGDFRSRLW 575
Score = 183 (69.5 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 55/225 (24%), Positives = 92/225 (40%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI-PY---- 329
K T+ GH + + + +DG ++ S DK K WD E G+ T ++ P
Sbjct: 360 KIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVT 419
Query: 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
V ++PD ++ AG D + WD T + Y+ HL +V ++ F + + S
Sbjct: 420 SVAMSPDG---RLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGS 476
Query: 390 DDKSLRVWEFG---IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERF 446
DKSL++W+ + H + S++ P+ +WL + S D + + R
Sbjct: 477 LDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG- 535
Query: 447 QLNKKKRFAGH--IVAGYACQVNFSPDGRFVM-SGDGEGKCWFWD 488
GH V A + G F SGD + W +D
Sbjct: 536 --TTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKYD 578
Score = 118 (46.6 bits), Expect = 0.00090, P = 0.00090
Identities = 34/134 (25%), Positives = 56/134 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD---TETGQVIRTFSTGKIPYV 330
G + Y GH +V ++F DG + S DK++K WD + + R G +V
Sbjct: 447 GYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFV 506
Query: 331 --VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR---F 385
V +PD + L++G D+ + WD H +V ++ N F
Sbjct: 507 LSVAFSPDG---SWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVF 563
Query: 386 VTSSDDKSLRVWEF 399
T S D R+W++
Sbjct: 564 ATGSGDFRSRLWKY 577
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 63/257 (24%), Positives = 114/257 (44%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 336
R++ GH A+ F + + TAS+D + W + + R + ++ +P
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
N+L + D+ + W ++ K + E+ H V ++ F + VT+S+DKS++V
Sbjct: 72 G---NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKV 128
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W + Y H H + P+ + + S D I I+ T + +N F+
Sbjct: 129 WSMFRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN---FSD 184
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC-IGC-EWHPLE 514
+ G+A V+F+P+G + S + WD + K+ + + H C + C +HPL
Sbjct: 185 SV--GFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHS--CGVNCLSFHPLG 240
Query: 515 QSKVATCGWDGLIKYWD 531
S V T DG +K D
Sbjct: 241 NSLV-TASSDGTVKMLD 256
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 50/211 (23%), Positives = 93/211 (44%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPD 336
+ H+ VR + F DG +TAS DK+IK W + + +S + + V K +PD
Sbjct: 98 FKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFL--YSLYRHTHWVRCAKFSPD 155
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++++ DK I WD K+ + +G N + F + ++ D ++++
Sbjct: 156 G---RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKI 212
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W+ + ++++ + H + +S HP N L S D + + E + + G
Sbjct: 213 WDIRMNKLLQHY-QVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQ---G 268
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
H G V+FS DG + SG + + W
Sbjct: 269 H--TGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 49/174 (28%), Positives = 78/174 (44%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IP 328
S F + + + H+ VR F DG ++ S DK IK WDT Q + FS
Sbjct: 130 SMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 189
Query: 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
V NP+ I AG SD + WD+ ++ Q Y H VN ++F VT+
Sbjct: 190 NFVDFNPNGTC--IASAG-SDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTA 246
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
S D ++++ + I + Y + H + ++S + L + D Q+LI+ T
Sbjct: 247 SSDGTVKMLDL-IEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRT 299
Score = 163 (62.4 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 53/232 (22%), Positives = 96/232 (41%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
H + R Y+GH V + F G +AS D+ ++ W + F P V
Sbjct: 50 HARAYR-YVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAP-VRS 107
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
++ D Q +L+ DK I W M + +H V F R V+ S+DK
Sbjct: 108 VDFSADGQ-LLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK- 451
++++W+ + S+ + + +PN +A+ D+ + I+ R +NK
Sbjct: 167 TIKIWDTTNKQCVNNFSDS-VGFANFVDFNPNGTCIASAGSDHAVKIWDIR----MNKLL 221
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
+ + H G C ++F P G +++ +G D ++ TL+ H G
Sbjct: 222 QHYQVHS-CGVNC-LSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTG 271
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 207 (77.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 57/258 (22%), Positives = 119/258 (46%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
Y GHS + D+++ +D +AS D ++ WD + G +V V NP
Sbjct: 81 YEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS 140
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
N++++G D+ I W++ T + + H ++++ F V++S D S ++W
Sbjct: 141 ---NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILI--YSTRERFQLNKKKRFA 455
+ +K + + ++ PN ++ +LD+ + + Y+T +F K +
Sbjct: 198 DAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATG-KFL----KVYT 252
Query: 456 GHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
GH + FS +G++++SG + + WD ++ + + L+ H I HP+
Sbjct: 253 GHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPV- 311
Query: 515 QSKVATCG--WDGLIKYW 530
Q+++++ G D I+ W
Sbjct: 312 QNEISSSGNHLDKTIRIW 329
Score = 174 (66.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 49/174 (28%), Positives = 88/174 (50%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
GKC+R HS + + F DG+ ++AS+D + K WD + G ++T K P V
Sbjct: 160 GKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFA 219
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTIT--FVDSNRRFVTS- 388
K +P+ + IL+A + D + + T + + Y H V IT F +N +++ S
Sbjct: 220 KFSPNG--KFILVATL-DSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSG 276
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS--LDNQILIY 440
S+D + +W+ +++ + E H ++ S+S HP N +++ LD I I+
Sbjct: 277 SEDNCVYLWDLQARNILQRL-EGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 152 (58.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 35/158 (22%), Positives = 71/158 (44%)
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
N+L + DK ++ W + Y+ H ++ + + + ++SDD +LR+W+
Sbjct: 56 NLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDAR 115
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
P + H + + ++ +P +N + + S D I I+ + + K + I +
Sbjct: 116 SPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISS 175
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498
V+F+ DG ++S +G C WD K +TL
Sbjct: 176 -----VHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 37/164 (22%), Positives = 73/164 (44%)
Query: 369 HLGAVNTITFVDSNRRFVTSSDDKSLRVWEF-GIPVVIKYISEPHMHSMPSISLHPNTNW 427
H A++ + F + ++S DK++ +W ++ +Y E H + ++ ++++
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRY--EGHSSGISDLAWSSDSHY 99
Query: 428 LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
+ S D + I+ R ++ K R GH + VNF+P ++SG + W
Sbjct: 100 TCSASDDCTLRIWDARSPYECLKVLR--GH--TNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 488 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+ K+ K R +K H + I + S + + DG K WD
Sbjct: 156 EVKTGKCVRMIKAHS-MPISSVHFNRDGSLIVSASHDGSCKIWD 198
Score = 115 (45.5 bits), Expect = 0.00080, P = 0.00080
Identities = 30/130 (23%), Positives = 61/130 (46%)
Query: 274 GKCMRTYMGH-SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYV 330
G C++T + S AV F +G L A+ D +K + TG+ ++ ++ T K+ +
Sbjct: 202 GTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKV-FC 260
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
+ +++G D + WD+ + I Q + H AV +++ +S +
Sbjct: 261 ITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGN 320
Query: 391 --DKSLRVWE 398
DK++R+W+
Sbjct: 321 HLDKTIRIWK 330
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 204 (76.9 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 56/248 (22%), Positives = 110/248 (44%)
Query: 274 GKC--MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 331
G+C GH A+ ++ F D + ++A DK ++ WD ETG IR F + V
Sbjct: 67 GECENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKS-HTDIVN 125
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
++ + ++ + D ++ DM +KE +++ +TF D+ + D
Sbjct: 126 SVDVNRRGPQMICSASDDGTVMVHDMRSKEAAKKFICKYQQT-AVTFNDAADNVICGGID 184
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
++VW+ + ++Y+ H ++ S+S+ N N+L + S+D ++ + R +
Sbjct: 185 NQIKVWDM-LRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRL 243
Query: 452 -KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
R+ G H + +SP ++ +G + + W+ KS L H G + C
Sbjct: 244 VARYQGASHNFEKNLLKCGWSPRDNYITAGSADRFVYVWNAKSRACVYKLPGHLG-SVNC 302
Query: 509 E-WHPLEQ 515
HP +Q
Sbjct: 303 TALHPTQQ 310
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 55/250 (22%), Positives = 111/250 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 339
GH + F +DG+ +A YD+ I W+ G+ F+ G ++++ + D
Sbjct: 34 GHGGEIYTSQFSSDGSFLASAGYDQQIFLWNV-FGEC-ENFAVLKGHKGAIMEVKFNADS 91
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR----FVTSSDDKSLR 395
+++ AG +DK + WDM T + + H VN+ VD NRR ++SDD ++
Sbjct: 92 SHLVSAG-TDKTVRVWDMETGSCIRNFKSHTDIVNS---VDVNRRGPQMICSASDDGTVM 147
Query: 396 VWEF-GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
V + K+I + + +++ + + + +DNQI ++ + + + +
Sbjct: 148 VHDMRSKEAAKKFICK---YQQTAVTFNDAADNVICGGIDNQIKVW---DMLRNDVRYVL 201
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS-CKVFRTLKCHEGVCIGCEWHPL 513
+GH ++ S +G F++S + WD + R + ++G H
Sbjct: 202 SGH--RDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGAS-----HNF 254
Query: 514 EQSKVATCGW 523
E++ + CGW
Sbjct: 255 EKN-LLKCGW 263
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 207 (77.9 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 64/259 (24%), Positives = 118/259 (45%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G+C+ GH+ AV + + G + T+S D+ +K W G + RTFS G +V +
Sbjct: 241 GQCLMNIAGHTNAVTAVRWGGAGLIY-TSSKDRTVKMWRAADGILCRTFS-GHAHWVNNI 298
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
L+ D + + D+ ++T+E+ + + AV D V+ SDD
Sbjct: 299 ALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCP----DEVESLVSCSDD 354
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
+L +W ++ ++ H + + + P+ +A+ S D + ++ + +
Sbjct: 355 NTLYLWRNNQNKCVERMTG-HQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYM--- 410
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWH 511
F GH+ A Y V +S D R ++SG + W ++ K+ + L H G +W
Sbjct: 411 ATFRGHVQAVYT--VAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWA 468
Query: 512 PLEQSKVATCGWDGLIKYW 530
P + S+VA+ G D +IK W
Sbjct: 469 P-DGSRVASGGKDKVIKLW 486
Score = 164 (62.8 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 32/125 (25%), Positives = 59/125 (47%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
KC+ GH V D+ + D +AS+DK+++ W GQ + TF G + V +
Sbjct: 366 KCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFR-GHVQAVYTVA 424
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
D + ++++G D + W + TK++ QE H V + + R + DK +
Sbjct: 425 WSADSR-LIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVI 483
Query: 395 RVWEF 399
++W +
Sbjct: 484 KLWAY 488
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 215 (80.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 67/253 (26%), Positives = 114/253 (45%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDK 339
+ GH +AV +SF +D +AS D +K WDT T + T G +V + D
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLE-GHNEWVKSVVFSHDS 317
Query: 340 QNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+ LLA SD V+ WD T + + H +V ++ F +R + S+D+++R+WE
Sbjct: 318 R--LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWE 375
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ +++ E H S+ ++S ++ LA+ S + I+ TR N + GH
Sbjct: 376 TTTGL-LRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLE---GH- 430
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518
V+FSPD R + S + W + + RTL+ H + + +
Sbjct: 431 -DDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSH-DSRLI 488
Query: 519 ATCGWDGLIKYWD 531
A+ D +K WD
Sbjct: 489 ASASDDMTVKIWD 501
Score = 207 (77.9 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 61/261 (23%), Positives = 114/261 (43%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T G R GH+ +VR + F +D + S D+ ++ W+T TG + TF + +
Sbjct: 334 TATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVM 393
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
D ++ LA SD V+ WD T + + H VN+++F +R ++S
Sbjct: 394 AVSFAHDSRR---LASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASAS 450
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
DD+++++W + + + E H + S+ ++ +A+ S D + I+ T +
Sbjct: 451 DDRTVKIWHAATGSLQRTL-EGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTAT---VP 506
Query: 450 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCE 509
+ H + V FS D R + S + WD + + TL+ H+
Sbjct: 507 LQNNLESH--DNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVS 564
Query: 510 WHPLEQSKVATCGWDGLIKYW 530
+ P + +A+ DG +K W
Sbjct: 565 FSP-DSRLLASASDDGTVKIW 584
Score = 206 (77.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 58/253 (22%), Positives = 114/253 (45%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T GH++ V+ + F +D +AS D +K WDT TG + R G V + D
Sbjct: 300 TLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLK-GHNDSVRSVVFSHD 358
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+ ++ +G +D+ + W+ T + ++ H +V ++F +RR ++SD ++++W+
Sbjct: 359 SR-LIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD 417
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
++ + E H + S+S P++ LA+ S D + I+ + ++ GH
Sbjct: 418 TRTGS-LQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATG---SLQRTLEGH- 472
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518
+ V FS D R + S + WD + + L+ H+ + + +
Sbjct: 473 -NDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSH-DSRLL 530
Query: 519 ATCGWDGLIKYWD 531
A+ D +K WD
Sbjct: 531 ASASDDMTVKIWD 543
Score = 206 (77.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 67/262 (25%), Positives = 115/262 (43%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T G T+ H +V +SF +D + +AS N+K WDT TG ++ G V
Sbjct: 376 TTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGS-LQNVLEGHDDCV 434
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
++ D + LLA SD + V+ W T + + + H V ++ F +R ++S
Sbjct: 435 NSVSFSPDSR--LLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASAS 492
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
DD ++++W+ V ++ E H + + S+ ++ LA+ S D + I+ T +
Sbjct: 493 DDMTVKIWDTAT-VPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATG---S 548
Query: 450 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCE 509
+ GH V+FSPD R + S +G W + V T V I
Sbjct: 549 LENTLEGH--DDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLA 606
Query: 510 WHPLEQSKVATCGWDGLIKYWD 531
+ + +A+ DG +K WD
Sbjct: 607 FSHTS-NLLASAMDDGTVKIWD 627
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 203 (76.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 65/269 (24%), Positives = 116/269 (43%)
Query: 268 DKSTF----HGKCMR--TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRT 321
DK F +G+C+ GH + ++ + D + TA DK+I WD+ G++I+
Sbjct: 83 DKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKR 142
Query: 322 FSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS 381
V P ++ +G D+ +D +K T + QH V ++ F D+
Sbjct: 143 IREHS-GVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLF-QHKYPVTSVCFSDA 200
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 441
+ + +T D +RVW+ Y H ++ S S+ + +L + S+DN I+
Sbjct: 201 SDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWD 260
Query: 442 TRERFQLNKK-KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498
R N+ K F G + + ++S DGR + G + + + WD + ++ L
Sbjct: 261 IRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCL 320
Query: 499 KCHEGVCIGCEWHPLEQSKVATCGWDGLI 527
H G +HP E +A+C D I
Sbjct: 321 PGHSGTVNEVTFHPNEPI-IASCSSDKTI 348
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/210 (24%), Positives = 85/210 (40%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIR-TFSTGKIPYVVKLNPDDDK 339
+GH + F + GT + DK I W+ G+ I + G +++L+ D
Sbjct: 59 IGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVY-GECINYSVLKGHKGTILELHWSTDS 117
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS-SDDKSLRVWE 398
I A +DK I WD N E+ + +H G VN+ V S SDD+S R+++
Sbjct: 118 NEIYTA-CTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFD 176
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
H + + S+ ++ L +DN I ++ R Q + A H
Sbjct: 177 TRSKGSTHLFQ--HKYPVTSVCFSDASDQLITGGIDNVIRVWDIRN--QEDPLYTLASH- 231
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488
+ S DG +++S + C WD
Sbjct: 232 -QDTITSTSVSKDGAYLLSNSMDNSCKIWD 260
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPY---VV 331
T H + S DG L+ S D + K WD + I+TF+ + + ++
Sbjct: 227 TLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLI 286
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
K + D + I G SD+++ WD NTK++ H G VN +TF + + S D
Sbjct: 287 KSSWSIDGRRIG-CGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSD 345
Query: 392 KSLRVWE 398
K++ + E
Sbjct: 346 KTIYLGE 352
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 206 (77.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 63/257 (24%), Positives = 112/257 (43%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 336
R + GH A+ F + + TAS+D + W + + R + ++ +P
Sbjct: 12 RYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
N+L + DK + W ++ K + E+ H V ++ F + VT+S+DKS++V
Sbjct: 72 G---NLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKV 128
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W + Y H H + P+ + + S D I I+ T + +N F+
Sbjct: 129 WSMYRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNN---FSD 184
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC-IGC-EWHPLE 514
+ G+A V+FSP+G + S + WD + ++ + + H C + C +HP
Sbjct: 185 SV--GFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHS--CGVNCLSFHPSG 240
Query: 515 QSKVATCGWDGLIKYWD 531
S V T DG +K D
Sbjct: 241 NSLV-TASSDGTVKILD 256
Score = 187 (70.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 52/211 (24%), Positives = 94/211 (44%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPD 336
+ H+ VR + F DG +TAS DK+IK W + + +S + + V K +PD
Sbjct: 98 FKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFL--YSLYRHTHWVRCAKFSPD 155
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++++ DK I WD +K+ + +G N + F + ++ D ++R+
Sbjct: 156 G---RLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRI 212
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W+ + ++++ + H + +S HP+ N L S D + I E + + G
Sbjct: 213 WDIRMNRLLQHY-QVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQ---G 268
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
H G V+FS DG SG + + W
Sbjct: 269 H--TGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 166 (63.5 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 53/231 (22%), Positives = 92/231 (39%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
H + R Y+GH V + F G +AS DK ++ W + F P V
Sbjct: 50 HARAYR-YVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAP-VRS 107
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
++ D Q L+ DK I W M + +H V F R V+ S+DK
Sbjct: 108 VDFSADGQ-FLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++++W+ + S+ + + PN +A+ D+ + I+ R L +
Sbjct: 167 TIKIWDTTSKQCVNNFSDS-VGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLL---Q 222
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
+ H G C ++F P G +++ +G D ++ TL+ H G
Sbjct: 223 HYQVHS-CGVNC-LSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTG 271
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IP 328
S + + + + H+ VR F DG ++ S DK IK WDT + Q + FS
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFA 189
Query: 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
V +P+ I AG SD + WD+ + Q Y H VN ++F S VT+
Sbjct: 190 NFVDFSPNGTC--IASAG-SDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTA 246
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
S D ++++ + + + Y + H + ++S + + D Q+L++ T
Sbjct: 247 SSDGTVKILDL-VEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRT 299
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 206 (77.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 60/256 (23%), Positives = 112/256 (43%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 336
R + GH A+ + F G + TAS+D + W+ + + R + V+ +P
Sbjct: 12 RYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSP- 70
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
N+L + D+ + W + + + E+ H V ++ F + T+S+DKS++V
Sbjct: 71 --LGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W + Y H H + P+ + + S D I I+ T + +N F+
Sbjct: 129 WNMYRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN---FSD 184
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQ 515
+ G+A V+F+P+G + S + WD + K+ + + H G + C +HP
Sbjct: 185 SV--GFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG-VNCVSFHP-SG 240
Query: 516 SKVATCGWDGLIKYWD 531
+ + T DG +K D
Sbjct: 241 NYIITASSDGTLKILD 256
Score = 189 (71.6 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 55/229 (24%), Positives = 102/229 (44%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPD 336
+ H+ VR + F DG TAS DK+IK W+ + + +S + + V K +PD
Sbjct: 98 FKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFL--YSLYRHTHWVRCAKFSPD 155
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++++ DK I WD K+ + +G N + F + ++ D ++++
Sbjct: 156 G---RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKI 212
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W+ + ++++ + H + +S HP+ N++ S D + I E + + G
Sbjct: 213 WDIRVNKLLQHY-QVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQ---G 268
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFW----DWKSCK--VFRTLK 499
H G V+FS G SG + + W D+ +CK + R LK
Sbjct: 269 H--TGPVFTVSFSKGGELFSSGGADTQVLLWRTNFDYLNCKDMIKRNLK 315
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 51/224 (22%), Positives = 91/224 (40%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDK 339
Y+GH V + F G +AS D+ ++ W + F P V ++ D
Sbjct: 56 YVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAP-VRSVDFSADG 114
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
Q L DK I W+M + +H V F R V+ S+DK++++W+
Sbjct: 115 Q-FLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459
+ S+ + + +PN +A+ D+ + I+ R L + +G
Sbjct: 174 TNKQCVNNFSDS-VGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSG--- 229
Query: 460 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
G C V+F P G ++++ +G D ++ TL+ H G
Sbjct: 230 -GVNC-VSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTG 271
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 205 (77.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 67/251 (26%), Positives = 115/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + +DG K ++ D IK WD Q ++T G V+ L DD +
Sbjct: 209 NSKGVYCLQY-DDG-KIVSGLRDNTIKIWDRTDLQCVKTLM-GHTGSVLCLQYDD---KV 262
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
+++G SD + WD+NT E+ H AV + F +N VT S D+S+ VW+ P
Sbjct: 263 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMTSP 320
Query: 403 --VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 321 SEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 374
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 375 GIAC-LQYRD--RLVVSGSSDNSIRLWDIECGACLRVLEGHEEL-VRCI--RFDTKRIVS 428
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 429 GAYDGKIKVWD 439
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 52/217 (23%), Positives = 97/217 (44%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C++T MGH+ +V + + D ++ S D ++ WD TG+++ T V+ L
Sbjct: 241 QCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHLR 297
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNT-KEIT--QEYDQHLGAVNTITFVDSNRRFVTSSDD 391
++ +++ D+ I WDM + EIT + H AVN + F + V++S D
Sbjct: 298 FNN---GMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD 352
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
++++VW +++ + H L + + S DN I ++ L
Sbjct: 353 RTIKVWSTS---TCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACL--- 406
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488
+ GH C + F D + ++SG +GK WD
Sbjct: 407 RVLEGHEEL-VRC-IRF--DTKRIVSGAYDGKIKVWD 439
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 206 (77.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 51/189 (26%), Positives = 89/189 (47%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+ D I WD+ + T Y H V + + F ++S D++ R+W F
Sbjct: 353 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRT 412
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462
++ I H+ + + HPN+N+LA S D + ++ST+ Q N + F GH G
Sbjct: 413 YPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQ---QGNSVRLFTGH--RGP 466
Query: 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 522
+ FSP+G+++ S + + WD S +++ L+ H + P + S VA+
Sbjct: 467 VLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP-DSSLVASAS 525
Query: 523 WDGLIKYWD 531
D ++ WD
Sbjct: 526 MDNSVRVWD 534
Score = 171 (65.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 41/190 (21%), Positives = 88/190 (46%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
Y GH+ V D+ F +AS+D+ + W + +R ++ G + V VK +P+
Sbjct: 376 YQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNS 434
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
N L G +DK + W + + H G V ++ F + + ++ +D+ L++W
Sbjct: 435 ---NYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 491
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ + K + H ++ S++ P+++ +A+ S+DN + ++ R +
Sbjct: 492 DLASGTLYKEL-RGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSE 550
Query: 458 IVAGYACQVN 467
+V Y Q++
Sbjct: 551 LVGVYTGQMS 560
Score = 158 (60.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 56/226 (24%), Positives = 92/226 (40%)
Query: 267 EDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
+D+ G M+ GH V F D + L+ S D +I+YWD G T
Sbjct: 321 DDEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQG 378
Query: 327 IPYVVKLNPDDDKQNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
Y V + D ++ A S D+ W + + Y HL V+ + F ++
Sbjct: 379 HAYPV-WDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 437
Query: 386 VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445
T S DK++R+W ++ + H + S++ PN +LA+ D ++ ++
Sbjct: 438 ATGSTDKTVRLWSTQQGNSVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 496
Query: 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 491
L K+ R GH + FSPD V S + WD +S
Sbjct: 497 -TLYKELR--GH--TDNITSLTFSPDSSLVASASMDNSVRVWDIRS 537
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 203 (76.5 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 64/224 (28%), Positives = 101/224 (45%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPD 336
T GH VR ++ + DK +K WD ET +VIR + G + Y +KL+P
Sbjct: 200 TLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYH-GHLSGVYALKLHPT 258
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
D +L+ D WDM T++ H V ++ + + + VT S D ++R+
Sbjct: 259 LD---VLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRL 315
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFA 455
W+ + ++ H ++ ++SLHP+ A+ S DN I + E F N F
Sbjct: 316 WDLAAGKTLTTLTH-HKKTVRALSLHPDEFTFASGSSDN-IKHWKFPEGAFMGN----FE 369
Query: 456 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
GH +N S + F SG G FWDWKS ++ L+
Sbjct: 370 GHNAIVNTLSIN-SDNVMF--SGADNGSMCFWDWKSGHKYQELQ 410
Score = 137 (53.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 42/164 (25%), Positives = 70/164 (42%)
Query: 277 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPD 336
MR GH VR + F T + D+ IK WD +G V++ TG I V L
Sbjct: 156 MRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASG-VLKLTLTGHIATVRGLAVS 214
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
+ G DK + WD+ T ++ + Y HL V + + VT+ D RV
Sbjct: 215 PRHPYLFSCG-EDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARV 273
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
W+ + +S H ++ S+++ + S+D+ I ++
Sbjct: 274 WDMRTRQNVHVLSG-HKSTVASLAVQEFDPQVVTGSMDSTIRLW 316
Score = 127 (49.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 43/187 (22%), Positives = 76/187 (40%)
Query: 346 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVI 405
G D+ I WD+ + + H+ V + + + +DK ++ W+ VI
Sbjct: 181 GAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVI 240
Query: 406 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH--IVAGYA 463
++ H+ + ++ LHP + L D ++ R R ++ +GH VA A
Sbjct: 241 RHY-HGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHV---LSGHKSTVASLA 296
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 523
Q F P V++G + WD + K TL H+ HP ++ A+
Sbjct: 297 VQ-EFDPQ---VVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHP-DEFTFASGSS 351
Query: 524 DGLIKYW 530
D IK+W
Sbjct: 352 DN-IKHW 357
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 207 (77.9 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 65/240 (27%), Positives = 102/240 (42%)
Query: 282 GHSKAVRDISFCNDGTKFLTAS--YDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDK 339
GHS + ++F D ++ L A+ IK WD E +V+RT TG V +N
Sbjct: 57 GHSSGIDSVTF--DASEGLVAAGAASGTIKLWDLEEAKVVRTL-TGHRSNCVSVNFHPFG 113
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
+ +G D + WD+ K Y H VN + F R V+ +D ++VW+
Sbjct: 114 E-FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Query: 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459
++ H + S+ HP+ LA S D + + E F+L G
Sbjct: 173 TAGKLLHEFKS-HEGKIQSLDFHPHEFLLATGSADKTVKFWDL-ETFELIGS---GGTET 227
Query: 460 AGYACQVNFSPDGRFVMSGDGEG-KCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518
G C + F+PDG+ V+ G E K + W+ ++CH+GV +G W L V
Sbjct: 228 TGVRC-LTFNPDGKSVLCGLQESLKIFSWE--------PIRCHDGVDVG--WSNLSDMNV 276
Score = 193 (73.0 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 48/190 (25%), Positives = 90/190 (47%)
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
+L+ G D K+ W + H ++++TF S + ++++W+
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 90
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
V++ ++ H + S++ HP + A+ SLD + I+ R++ ++ K GH G
Sbjct: 91 AKVVRTLTG-HRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK---GH-TRG 145
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
+ F+PDGR+++SG + WD + K+ K HEG ++HP E +AT
Sbjct: 146 VNV-LRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE-FLLATG 203
Query: 522 GWDGLIKYWD 531
D +K+WD
Sbjct: 204 SADKTVKFWD 213
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 42/168 (25%), Positives = 76/168 (45%)
Query: 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKL 333
C+ TY GH++ V + F DG ++ D +K WD G+++ F + GKI +
Sbjct: 135 CIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSL-DF 193
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+P + +L G +DK + WD+ T E+ V +TF + + + V +S
Sbjct: 194 HPHEF---LLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTF-NPDGKSVLCGLQES 249
Query: 394 LRV--WE-----FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD 434
L++ WE G+ V +S+ ++H + N N + +D
Sbjct: 250 LKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVD 297
Score = 138 (53.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVK 332
K +RT GH ++F G F + S D N+K WD I T+ T + V++
Sbjct: 92 KVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN-VLR 150
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
PD +++G D + WD+ ++ E+ H G + ++ F T S DK
Sbjct: 151 FTPDG---RWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADK 207
Query: 393 SLRVWE 398
+++ W+
Sbjct: 208 TVKFWD 213
>TAIR|locus:2089179 [details] [associations]
symbol:AT3G27640 "AT3G27640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 KO:K11790 EMBL:AY035167 EMBL:AY063003 IPI:IPI00539568
RefSeq:NP_566822.1 UniGene:At.19178 ProteinModelPortal:Q94C55
SMR:Q94C55 PRIDE:Q94C55 EnsemblPlants:AT3G27640.1 GeneID:822386
KEGG:ath:AT3G27640 TAIR:At3g27640 InParanoid:Q94C55 OMA:NRIYLYN
PhylomeDB:Q94C55 ProtClustDB:CLSN2688846 ArrayExpress:Q94C55
Genevestigator:Q94C55 Uniprot:Q94C55
Length = 535
Score = 155 (59.6 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 410 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 469
E H + S+S + +L A DN+I +Y+T R + F+G + + + S
Sbjct: 289 EKRSHGIVSLSQDSSGTYLTASCKDNRIYLYNTL-RLDKGPVQSFSGCRIDSFFVRTMIS 347
Query: 470 PDGRFVMSGDGEGKCWFWDWKSCKVFRT-LKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 528
PDG +V+SG +G + W +V LK H+ +W P E KVAT D ++
Sbjct: 348 PDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVR 407
Query: 529 YWD 531
W+
Sbjct: 408 LWN 410
Score = 96 (38.9 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R ++ H A+ DIS+ + LTAS D+ IK WD E + G V +
Sbjct: 122 RDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVL-IGHTGTVKSMCSHP 180
Query: 338 DKQNILLAGMSDKKIVQWDMNTK 360
++L++G D WD+ K
Sbjct: 181 TNSDLLVSGSRDGCFALWDLRCK 203
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 201 (75.8 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 58/257 (22%), Positives = 107/257 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
GKC T+ GH+ + +SF T T S D K WD ++G+ + T TG + ++ L
Sbjct: 167 GKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTL-TGHLAEIISL 225
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+ D I+ G D +V WD +T H +++ F +T S DK+
Sbjct: 226 SFDTSGDRII-TGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKT 284
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR 453
+W+ + ++ H + +A S D +Y+ R + K +
Sbjct: 285 CMLWDATSGKCVATLTG-HDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLE- 342
Query: 454 FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPL 513
GH G +++F+P G +++G + WD ++ + + L+ H C ++
Sbjct: 343 --GH--EGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFN-Y 397
Query: 514 EQSKVATCGWDGLIKYW 530
+ + V T D + W
Sbjct: 398 KGNIVITGSKDNSCRIW 414
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 54/255 (21%), Positives = 108/255 (42%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLN-PDDDKQ 340
H + +++ G+ F+T SYD+ K WDT +G+ + T + + Y + N P DK
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDK- 149
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
+ G DK W T + + H + ++F + T S D + ++W+
Sbjct: 150 --IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQ 207
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ H+ + S+S + + + S D+ ++++ +K H +
Sbjct: 208 SGEEVVTLTG-HLAEIISLSFDTSGDRIITGSFDHTVVVWDA----STGRKV----HTLI 258
Query: 461 GYACQVN---FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI-GCEWHPLEQS 516
G+ +++ FS D +++G + C WD S K TL H+ + C
Sbjct: 259 GHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSC--FDYTGK 316
Query: 517 KVATCGWDGLIKYWD 531
+AT DG + ++
Sbjct: 317 LIATASADGTARVYN 331
Score = 172 (65.6 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 59/262 (22%), Positives = 108/262 (41%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY 329
T G+ + T GH V I+F N G K T S+DK K W ETG+ TF G
Sbjct: 121 TASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFR-GHTAE 179
Query: 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
+V L+ + + ++ G D WD+ + E HL + +++F S R +T S
Sbjct: 180 IVCLS-FNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGS 238
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
D ++ VW+ + + H + S + + + S+D +++ +
Sbjct: 239 FDHTVVVWDASTGRKVHTLIG-HCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVA 297
Query: 450 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCE 509
I+ +C F G+ + + +G ++ + K L+ HEG
Sbjct: 298 TLTGHDDEILD--SC---FDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKIS 352
Query: 510 WHPLEQSKVATCGWDGLIKYWD 531
++P + +++ T D + WD
Sbjct: 353 FNP-QGNRLLTGSSDKTARIWD 373
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 197 (74.4 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 71/270 (26%), Positives = 111/270 (41%)
Query: 275 KCMRTYMGHSKAVRDISFC--NDGTKFLTASYDKNIKYWDTET---------GQVIRTFS 323
K T GH+ V I+ ND T L++S DK I WD ++ G+ +R+
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSL- 65
Query: 324 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNR 383
TG +V + D Q L+G DK + WD+N T+++ H V ++ F NR
Sbjct: 66 TGHNHFVSDVVISSDGQ-FALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNR 124
Query: 384 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN--WLAAQSLDNQILIYS 441
+ V+ S DKS+++W + H + ++ P+ + + D + +++
Sbjct: 125 QIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWN 184
Query: 442 TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 501
K GH GY V SPDG SG +G+ WD K TL +
Sbjct: 185 LGN---CRLKTNHIGH--TGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN 239
Query: 502 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+ V + P A G IK WD
Sbjct: 240 D-VINAMSFSPNRYWLCAAVG--SSIKIWD 266
Score = 169 (64.5 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 61/230 (26%), Positives = 106/230 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVK 332
G+ +R+ GH+ V D+ +DG L+ S+DK ++ WD G R F S K V
Sbjct: 59 GRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVA 118
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTK-EITQEYDQHLGAVNTITFVDSNRR--FVTSS 389
+ D+ +Q +++G DK I W+ + + T D H V+T+ F SNR V++
Sbjct: 119 FSADN-RQ--IVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAG 175
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
DK ++VW G +K H + ++++ P+ + A+ D Q +++ E L
Sbjct: 176 WDKVVKVWNLG-NCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY 234
Query: 450 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
G+ V ++FSP+ ++ + G WD + K LK
Sbjct: 235 T---LPGNDVIN---AMSFSPNRYWLCAAVGSS-IKIWDLEDKKEIEELK 277
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 197 (74.4 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 71/270 (26%), Positives = 111/270 (41%)
Query: 275 KCMRTYMGHSKAVRDISFC--NDGTKFLTASYDKNIKYWDTET---------GQVIRTFS 323
K T GH+ V I+ ND T L++S DK I WD ++ G+ +R+
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSL- 65
Query: 324 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNR 383
TG +V + D Q L+G DK + WD+N T+++ H V ++ F NR
Sbjct: 66 TGHNHFVSDVVISSDGQ-FALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNR 124
Query: 384 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN--WLAAQSLDNQILIYS 441
+ V+ S DKS+++W + H + ++ P+ + + D + +++
Sbjct: 125 QIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWN 184
Query: 442 TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 501
K GH GY V SPDG SG +G+ WD K TL +
Sbjct: 185 LGN---CRLKTNHIGH--TGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN 239
Query: 502 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+ V + P A G IK WD
Sbjct: 240 D-VINAMSFSPNRYWLCAAVG--SSIKIWD 266
Score = 169 (64.5 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 61/230 (26%), Positives = 106/230 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVK 332
G+ +R+ GH+ V D+ +DG L+ S+DK ++ WD G R F S K V
Sbjct: 59 GRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVA 118
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTK-EITQEYDQHLGAVNTITFVDSNRR--FVTSS 389
+ D+ +Q +++G DK I W+ + + T D H V+T+ F SNR V++
Sbjct: 119 FSADN-RQ--IVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAG 175
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
DK ++VW G +K H + ++++ P+ + A+ D Q +++ E L
Sbjct: 176 WDKVVKVWNLG-NCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY 234
Query: 450 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
G+ V ++FSP+ ++ + G WD + K LK
Sbjct: 235 T---LPGNDVIN---AMSFSPNRYWLCAAVGSS-IKIWDLEDKKEIEELK 277
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 207 (77.9 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 50/190 (26%), Positives = 89/190 (46%)
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
+LL G D K+ W + H V+++ F + + +++W+
Sbjct: 30 LLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEE 89
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+++ + H + ++ HP +LA+ S D + ++ TR++ + K GH G
Sbjct: 90 SKMVRAFTG-HRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYK---GH-TRG 144
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
+ + FSPDGR+V+SG + WD + K+ KCHEG ++HPLE +AT
Sbjct: 145 IST-IEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLE-FLLATG 202
Query: 522 GWDGLIKYWD 531
D +K+WD
Sbjct: 203 SADRTVKFWD 212
Score = 181 (68.8 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 66/242 (27%), Positives = 103/242 (42%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQ 340
GH+ V ++F ++ L + IK WD E +++R F+ + V+ +P +
Sbjct: 56 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE-- 113
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
L +G SD + WD K Q Y H ++TI F R V+ D ++VW+
Sbjct: 114 -FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL- 171
Query: 401 IPVVIKYISEPHMHSMP--SISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
K + E H P S+ HP LA S D + + E F+L R
Sbjct: 172 --TAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL-ETFELIGTTRPEATG 228
Query: 459 VAGYACQVNFSPDGRFVMSGDGEG-KCWFWDWKSCKV-----FRTLK--C-HEGVCIGCE 509
V A F PDG+ + G +G K + W+ C+ + TL C +EG IGC
Sbjct: 229 VRAIA----FHPDGQTLFCGLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCS 284
Query: 510 WH 511
++
Sbjct: 285 YY 286
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 38/167 (22%), Positives = 74/167 (44%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
K +R + GH + F G + S D N++ WDT I+T+ G + +
Sbjct: 91 KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYK-GHTRGISTIE 149
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
D + ++ G+ D + WD+ ++ E+ H G + ++ F T S D+++
Sbjct: 150 FSPDGRWVVSGGL-DNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTV 208
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 441
+ W+ +I + P + +I+ HP+ L LD+ + +YS
Sbjct: 209 KFWDLETFELIG-TTRPEATGVRAIAFHPDGQTLFC-GLDDGLKVYS 253
Score = 135 (52.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 36/132 (27%), Positives = 60/132 (45%)
Query: 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNP 335
C++TY GH++ + I F DG ++ D +K WD G+++ F + P + L
Sbjct: 134 CIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGP-IRSL-- 190
Query: 336 DDDKQNILLA-GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
D LLA G +D+ + WD+ T E+ V I F + DD L
Sbjct: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDD-GL 249
Query: 395 RVWEFGIPVVIK 406
+V+ + PV+ +
Sbjct: 250 KVYSWE-PVICR 260
Score = 122 (48.0 bits), Expect = 0.00068, P = 0.00068
Identities = 40/169 (23%), Positives = 68/169 (40%)
Query: 364 QEYDQHLGAVNTITF-VDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLH 422
QE+ H G VN ++ ++R +T DD + +W G + H + S++ +
Sbjct: 9 QEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCG-HTSPVDSVAFN 67
Query: 423 PNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG 482
+ A + I ++ E + + F GH V F P G F+ SG +
Sbjct: 68 SEEVLVLAGASSGVIKLWDLEESKMV---RAFTGH--RSNCSAVEFHPFGEFLASGSSDT 122
Query: 483 KCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
WD + +T K H E+ P + V + G D ++K WD
Sbjct: 123 NLRVWDTRKKGCIQTYKGHTRGISTIEFSP-DGRWVVSGGLDNVVKVWD 170
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 203 (76.5 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+ D I WD+ + T Y H V + + F ++S D++ R+W F
Sbjct: 357 LLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRT 416
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462
++ I H+ + + HPN+N+LA S D + ++ST+ Q N + F GH G
Sbjct: 417 YPLR-IYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQ---QGNSVRLFTGH--RGP 470
Query: 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 522
+ FSP+G+++ S + + WD S +++ L+ H + P + S +A+
Sbjct: 471 VLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP-DSSLIASAS 529
Query: 523 WDGLIKYWD 531
D ++ WD
Sbjct: 530 MDNSVRVWD 538
Score = 168 (64.2 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/169 (22%), Positives = 81/169 (47%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
Y GH+ V D+ F +AS+D+ + W + +R ++ G + V VK +P+
Sbjct: 380 YQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYA-GHLLDVDCVKFHPNS 438
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
N L G +DK + W + + H G V + F + + ++ +D+ L++W
Sbjct: 439 ---NYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLW 495
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERF 446
+ + K + H ++ S++ P+++ +A+ S+DN + ++ R +
Sbjct: 496 DLASGTLYKEL-RGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTY 543
Score = 147 (56.8 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 56/227 (24%), Positives = 94/227 (41%)
Query: 267 EDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
ED S G M+ GH V F +D + L+ S D +I+YWD +R+F T
Sbjct: 327 EDDSA--GTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWD------LRSF-TNT 377
Query: 327 IPYVVKLNP----DDDKQNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS 381
+ Y P D ++ A S D+ W + + Y HL V+ + F +
Sbjct: 378 VLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPN 437
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 441
+ T S DK++R+W ++ + H + +++ PN +LA+ D ++ ++
Sbjct: 438 SNYLATGSTDKTVRLWSTQQGNSVRLFTG-HRGPVLALAFSPNGKYLASAGEDQRLKLWD 496
Query: 442 TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488
L K+ R GH + FSPD + S + WD
Sbjct: 497 LASG-TLYKELR--GH--TDNITSLTFSPDSSLIASASMDNSVRVWD 538
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 216 (81.1 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 68/262 (25%), Positives = 125/262 (47%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY 329
+T G +T++GH+ V ++ +DG + ++ S + +K WD TG +++T ++G
Sbjct: 802 NTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGDLLKTLASG-FAG 859
Query: 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
V +PD +Q + AG D KI WD + + ++H GA+ +I F ++ VT S
Sbjct: 860 SVAFSPDS-RQ--IAAGFKDGKIFIWDA-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCS 915
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
D +++ W+ I V + + H + ++ L P+ +A+ S D I ++ +
Sbjct: 916 TDSTIKRWDITIGGVQEAVG--HSKHVTTMVLSPDGKVIASGSADKTIKLWDAATG---D 970
Query: 450 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCE 509
+K GH+ +V FS D R ++S E WD + KV + + + I
Sbjct: 971 LQKTLTGHLDT--VEKVVFSLDNRQIVSCSSEA-VKIWDAATGKVQNSFESDDVFTIVAV 1027
Query: 510 WHPLEQSKVATCGWDGLIKYWD 531
P + +A+ +G IK WD
Sbjct: 1028 -SP-DGKHIASGHCNGRIKLWD 1047
Score = 180 (68.4 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 57/261 (21%), Positives = 109/261 (41%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T G + GHS ++F +D + +T S D ++ W+T TG + +TF G V
Sbjct: 761 TATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTF-VGHTGTV 819
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
+ + D + I+ + K+ WD T ++ + G ++ F +R+
Sbjct: 820 LSVAISSDGRQIVSGSIEAVKL--WDAATGDLLKTLAS--GFAGSVAFSPDSRQIAAGFK 875
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D + +W+ ++ E H ++ SI+ P+ L S D+ I R +
Sbjct: 876 DGKIFIWDAA--GTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTI----KRWDITIGG 929
Query: 451 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
+ GH + + + SPDG+ + SG + WD + + +TL H +
Sbjct: 930 VQEAVGH--SKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVF 987
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
L+ ++ +C + +K WD
Sbjct: 988 S-LDNRQIVSCSSEA-VKIWD 1006
Score = 164 (62.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 59/247 (23%), Positives = 100/247 (40%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G +T H A+ I+F D + +T S D IK WD G V K + L
Sbjct: 886 GTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVL 945
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+PD ++ +G +DK I WD T ++ + HL V + F NR+ V+ S + +
Sbjct: 946 SPDG---KVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE-A 1001
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISL--------HPNTN---W-LAAQSLDNQILIYS 441
+++W+ V + ++ ++S H N W +A SL + Y
Sbjct: 1002 VKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYR 1061
Query: 442 -------TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV 494
T E F + ++ + G FSPD + ++S + WD + +
Sbjct: 1062 SKFDSLVTTEVFDIQLQEAIFNTQITGLV----FSPDAKLILSTSTDRAIKLWDAATGDL 1117
Query: 495 FRTLKCH 501
+ L CH
Sbjct: 1118 QKRLPCH 1124
Score = 144 (55.7 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 43/181 (23%), Positives = 87/181 (48%)
Query: 352 IVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIK-YISE 410
I+ +D T ++ + H +T+ F +R+ VT S D ++R+W + K ++
Sbjct: 756 IMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVG- 814
Query: 411 PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP 470
H ++ S+++ + + + S++ + ++ L + +G+A V FSP
Sbjct: 815 -HTGTVLSVAISSDGRQIVSGSIE-AVKLWDAATGDLLKT-------LASGFAGSVAFSP 865
Query: 471 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530
D R + +G +GK + WD + + +TL+ H G + + P + ++ TC D IK W
Sbjct: 866 DSRQIAAGFKDGKIFIWD-AAGTLQKTLERHPGAIMSIAFSP-DVKQLVTCSTDSTIKRW 923
Query: 531 D 531
D
Sbjct: 924 D 924
Score = 111 (44.1 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 29/102 (28%), Positives = 48/102 (47%)
Query: 277 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPD 336
++T GHS+AV ++F DG + + S IK WDT TG + +T S ++ +
Sbjct: 613 IQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQE 672
Query: 337 DDK-------QNILLAGMSDKKIVQWDMNTKEITQEYDQHLG 371
K ++++G D ++ WD T + QE H G
Sbjct: 673 QVKAMAFLPDSKLIISGYYDGSVMLWDTTTGD-RQEIADHFG 713
Score = 50 (22.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 10/47 (21%), Positives = 26/47 (55%)
Query: 325 GKIPYVVKLNPDDDKQNILLAGMSDKKI-VQWDMNTKEITQEYDQHL 370
GK+ +++ P D + +LLAG +I + + N++ ++ + ++
Sbjct: 227 GKVKWMLTSRPWDGAERVLLAGQDQVQINLDGEHNSQSVSGAVEAYI 273
Score = 39 (18.8 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 105 IYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYNTF 146
+ G Y + + R HK G + I++ + + TF
Sbjct: 265 VSGAVEAYITSKVEELSRQHKYGATLKSEIETELTERSEGTF 306
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 201 (75.8 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 65/251 (25%), Positives = 114/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + D K ++ D +IK WD + + ++ TG V+ L D+ +
Sbjct: 212 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVL-TGHTGSVLCLQYDE---RV 265
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
++ G SD + WD+NT E+ H AV + F SN VT S D+S+ VW+ P
Sbjct: 266 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASP 323
Query: 403 --VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 324 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 377
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 378 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 431
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 432 GAYDGKIKVWD 442
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 202 (76.2 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 49/189 (25%), Positives = 87/189 (46%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+ D I WD+ + T Y H V + + F + S D++ R+W F
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRT 416
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462
++ I H+ + + HPN+N+LA S D + ++S + Q N + F GH G
Sbjct: 417 YPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ---QGNSVRLFTGH--RGP 470
Query: 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 522
++FSP+G+++ S + + WD S +F+ L+ H + P + +A+
Sbjct: 471 VLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP-DSGLIASAS 529
Query: 523 WDGLIKYWD 531
D ++ WD
Sbjct: 530 MDNSVRVWD 538
Score = 175 (66.7 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 42/190 (22%), Positives = 88/190 (46%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
Y GH+ V D+ F + S+D+ + W + +R ++ G + V VK +P+
Sbjct: 380 YQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNS 438
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
N L G +DK + W + + H G V +++F + + ++ +D+ L++W
Sbjct: 439 ---NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 495
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ + K + H S+ S++ P++ +A+ S+DN + ++ R +G
Sbjct: 496 DLASGTLFKEL-RGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGE 554
Query: 458 IVAGYACQVN 467
+V Y Q++
Sbjct: 555 LVGVYTGQMS 564
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 57/226 (25%), Positives = 94/226 (41%)
Query: 267 EDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
E+ +T G M+ GH V F D + L+ S D +I+YWD G T
Sbjct: 327 EEDNT--GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQG 382
Query: 327 IPYVVKLNPDDDKQNILLA-GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
Y V + D ++ A G D+ W + + Y HL V+ + F ++
Sbjct: 383 HAYPV-WDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 386 VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445
T S DK++R+W ++ + H + S+S PN +LA+ D ++ ++
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTG-HRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 491
L K+ R GH + + FSPD + S + WD +S
Sbjct: 501 -TLFKELR--GHTDS--ITSLAFSPDSGLIASASMDNSVRVWDIRS 541
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 202 (76.2 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 50/189 (26%), Positives = 87/189 (46%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+ D I WD+ + T Y H V + + F + S D++ R+W F
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRT 416
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462
++ I H+ + + HPN+N+LA S D + ++S + Q N + F GH G
Sbjct: 417 YPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ---QGNSVRLFTGH--RGP 470
Query: 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 522
+ FSP+G+++ S + + WD S +F+ L+ H + P + S +A+
Sbjct: 471 VLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSP-DSSLIASAS 529
Query: 523 WDGLIKYWD 531
D ++ WD
Sbjct: 530 MDNSVRVWD 538
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 37/166 (22%), Positives = 80/166 (48%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
Y GH+ V D+ F + S+D+ + W + +R ++ G + V VK +P+
Sbjct: 380 YQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNS 438
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
N L G +DK + W + + H G V ++ F + + ++ +D+ L++W
Sbjct: 439 ---NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
+ + K + H ++ S++ P+++ +A+ S+DN + ++ R
Sbjct: 496 DLASGTLFKEL-RGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 540
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/223 (24%), Positives = 90/223 (40%)
Query: 267 EDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
+D+ G M+ GH V F D + L+ S D +I+YWD G T
Sbjct: 325 DDEDDDVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQG 382
Query: 327 IPYVVKLNPDDDKQNILLA-GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
Y V + D ++ A G D+ W + + Y HL V+ + F ++
Sbjct: 383 HAYPV-WDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 386 VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445
T S DK++R+W ++ + H + S++ PN +LA+ D ++ ++
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488
L K+ R GH + FSPD + S + WD
Sbjct: 501 -TLFKELR--GH--TDNITSLTFSPDSSLIASASMDNSVRVWD 538
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 197 (74.4 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 54/257 (21%), Positives = 106/257 (41%)
Query: 273 HGKCMR--TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
+G+C GH A+ D+ + D +AS D + WD E+GQ IR + G +
Sbjct: 96 YGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRY-IGHEEVI 154
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
+ Q +L++ D + WD KE + L + + ++ +
Sbjct: 155 NSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETEL-PITAVAQSEAGNEVFSGGI 213
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
D ++ VW+ ++ Y HM ++ S+ + P++ L + S D+ + + R N+
Sbjct: 214 DNAIHVWDIRKKAIV-YSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNR 272
Query: 451 KKRFAGHIVAGYA---CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
R G + +++P G + +G G+ WD+K+ K+ L H+G
Sbjct: 273 HIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVND 332
Query: 508 CEWHPLEQSKVATCGWD 524
+ P + + + D
Sbjct: 333 VRFTPNNEPIIVSASSD 349
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 57/260 (21%), Positives = 112/260 (43%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRT-FSTGKIPYVVKLNPDDDKQ 340
GHS V + F + S D++I W+T GQ +G ++ L D +
Sbjct: 64 GHSGEVFAVRFDPTAQHIASGSMDRSILLWNTY-GQCENYGILSGHKGAILDLQWSRDSK 122
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF-VTSSDDKSLRVWEF 399
I A +D + WD+ + + + Y H +N++ + V++SDD ++ +W+
Sbjct: 123 TIFSAS-ADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDP 181
Query: 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459
I Y+ E + + +++ N + + +DN I ++ R++ + AGH+
Sbjct: 182 RQKEAIDYL-ETEL-PITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYS---MAGHMD 236
Query: 460 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS-CKVFRTLKCHEGVCIGCE-------WH 511
+ +V SPD + ++S + WD + R ++ ++G +G E W+
Sbjct: 237 TITSLEV--SPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWN 294
Query: 512 PLEQSKVATCGWDGLIKYWD 531
P K+A D + WD
Sbjct: 295 PAGD-KIAAGSGDRSVVVWD 313
Score = 144 (55.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTE----TGQVIRTFSTGKIPYVVKL---- 333
GH + + D L+ S+D ++ WD T + IRT+ + L
Sbjct: 233 GHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRAS 292
Query: 334 -NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS-SDD 391
NP DK + AG D+ +V WD T +I + H G VN + F +N + S S D
Sbjct: 293 WNPAGDK---IAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSD 349
Query: 392 KSLRVWEFG 400
++L + E G
Sbjct: 350 RNLMLGELG 358
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 204 (76.9 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 60/230 (26%), Positives = 102/230 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTAS--YDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDD 338
GHS + ++F D ++ L A+ IK WD E +++RT + + + V +P +
Sbjct: 57 GHSSGIDSVTF--DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+G D + WD+ K Y H VN + F R V+ +D ++VW+
Sbjct: 115 ---FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD 171
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
++ H + S+ HP+ LA S D + + E F+L G
Sbjct: 172 LTAGKLLTEFKS-HEGQIQSLDFHPHEFLLATGSADRTVKFWDL-ETFELIGS---GGPE 226
Query: 459 VAGYACQVNFSPDGRFVMSGDGEG-KCWFWDWKSCKVFRTLKCHEGVCIG 507
AG C ++F+PDG+ V+ G E K + W+ ++CH+GV +G
Sbjct: 227 TAGVRC-LSFNPDGKTVLCGLQESLKIFSWE--------PIRCHDGVDVG 267
Score = 188 (71.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 48/190 (25%), Positives = 89/190 (46%)
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
+L+ G D K+ W + H ++++TF S + ++++W+
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+++ ++ H + S+ HP + A+ SLD + I+ R++ ++ K GH G
Sbjct: 91 AKIVRTLTG-HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK---GH-TRG 145
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
+ F+PDGR+V+SG + WD + K+ K HEG ++HP E +AT
Sbjct: 146 VNV-LRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE-FLLATG 203
Query: 522 GWDGLIKYWD 531
D +K+WD
Sbjct: 204 SADRTVKFWD 213
Score = 131 (51.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 32/126 (25%), Positives = 56/126 (44%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVK 332
K +RT GH + F G F + S D N+K WD I T+ T + V++
Sbjct: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN-VLR 150
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
PD +++G D + WD+ ++ E+ H G + ++ F T S D+
Sbjct: 151 FTPDG---RWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADR 207
Query: 393 SLRVWE 398
+++ W+
Sbjct: 208 TVKFWD 213
Score = 125 (49.1 bits), Expect = 0.00025, P = 0.00025
Identities = 32/127 (25%), Positives = 61/127 (48%)
Query: 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKL 333
C+ TY GH++ V + F DG ++ D +K WD G+++ F + G+I +
Sbjct: 135 CIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSL-DF 193
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+P + +L G +D+ + WD+ T E+ V ++F + + + V +S
Sbjct: 194 HPHEF---LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSF-NPDGKTVLCGLQES 249
Query: 394 LRV--WE 398
L++ WE
Sbjct: 250 LKIFSWE 256
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 47/179 (26%), Positives = 73/179 (40%)
Query: 357 MNTKEI--TQEYDQHLGAVNTITFV-DSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHM 413
M TK QE+ H AVN + S+R VT +D + +W G P I + H
Sbjct: 1 MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYG-HS 59
Query: 414 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 473
+ S++ + +AA + I ++ E + + GH V+F P G
Sbjct: 60 SGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIV---RTLTGH--RSNCISVDFHPFGE 114
Query: 474 FVMSGDGEGKCWFWDWKSCKVFRTLKCH-EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
F SG + WD + T K H GV + + P + V + G D ++K WD
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNV-LRFTP-DGRWVVSGGEDNIVKVWD 171
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 196 (74.1 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 55/225 (24%), Positives = 100/225 (44%)
Query: 265 HVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASY-DKNIKYWDTETGQVIRTFS 323
+V+ + G + T +GH+ V ++F DG ++ S D+ I+ W+ +G +I+T +
Sbjct: 125 NVDVRRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQTLA 184
Query: 324 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNR 383
P + D Q I A D+ I WD NT E+ Q G +N + R
Sbjct: 185 DNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGR 244
Query: 384 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
+ V + + ++ W + + P + + +I++ PN W+A + + I+I+
Sbjct: 245 KLVGAVRN-FVKAWNLADAKELFSVRGPSLE-INTIAVSPNNRWVATANKEGTIMIFDLA 302
Query: 444 ERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488
Q+ + GH G+ + FSPDG + SG + WD
Sbjct: 303 NGKQVTTLR---GH--QGWVLSLAFSPDGNTLYSGAEDKTVKIWD 342
Score = 127 (49.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 51/251 (20%), Positives = 111/251 (44%)
Query: 289 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF--STGKIPYVVKLNPDDDKQNILLAG 346
D++ DG ++L + D N+ G + T T K+ V +PD + I+
Sbjct: 108 DLAISADG-QWLAIAADNNVDVRRVRDGMRVETLVGHTDKVSGVA-FSPDGE--TIVSVS 163
Query: 347 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS--DDKSLRVWEFGIPVV 404
D+ I W+ + + Q +LG ++ F +F+T + D++++ W+ +
Sbjct: 164 GGDRTIRIWERASGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFEL 223
Query: 405 IKYISEPHMHS-MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 463
+ + P + +++ P+ L ++ N + ++ + K+ F+ V G +
Sbjct: 224 LG--TSPQQPGFINGLAVTPDGRKLVG-AVRNFVKAWNLADA-----KELFS---VRGPS 272
Query: 464 CQVN---FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
++N SP+ R+V + + EG +D + K TL+ H+G + + P + + + +
Sbjct: 273 LEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSP-DGNTLYS 331
Query: 521 CGWDGLIKYWD 531
D +K WD
Sbjct: 332 GAEDKTVKIWD 342
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 193 (73.0 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 58/243 (23%), Positives = 106/243 (43%)
Query: 296 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 355
G TASYD IK+WD +G R+ G+ ++ +L DK I AG ++ +
Sbjct: 3 GIILATASYDHTIKFWDPPSGGCYRSIDCGEF-HINRLEITHDKLYIAAAGNPQTRLFEV 61
Query: 356 DMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIK-Y-ISEPHM 413
+ N +D H G V + F + T S+D ++++W+ P + Y S P
Sbjct: 62 NTNNNSPAMSFDGHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECSAP-- 119
Query: 414 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 473
+ ++ LHPN L + + I ++ +++ G + G + S DG
Sbjct: 120 --VNTVVLHPNQAELISGDQNGSIRVWDLISN-TCSRELVPDGEV--GIT-SLTISSDGG 173
Query: 474 FVMSGDGEGKCWFW-----DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 528
V++ + +GKC+ W D + + ++ H + + P + +ATC D +K
Sbjct: 174 LVVASNTKGKCFVWRLGEDDTSRFEPLQKIEAHNAPILKTLFSP-DTKLLATCSADHTVK 232
Query: 529 YWD 531
W+
Sbjct: 233 IWN 235
Score = 150 (57.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 54/230 (23%), Positives = 99/230 (43%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
++ GH V + F +G T S D +K WD + R + V L+P+
Sbjct: 71 SFDGHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECSAPVNTVVLHPN-- 128
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEY--DQHLGAVNTITFVDSNRRFVTSSDDKS-LR 395
Q L++G + I WD+ + ++E D +G + ++T + S+ V +S+ K
Sbjct: 129 -QAELISGDQNGSIRVWDLISNTCSRELVPDGEVG-ITSLT-ISSDGGLVVASNTKGKCF 185
Query: 396 VWEFGIPVVIKY--ISEPHMHSMPSIS--LHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
VW G ++ + + H+ P + P+T LA S D+ + I++T++ N
Sbjct: 186 VWRLGEDDTSRFEPLQKIEAHNAPILKTLFSPDTKLLATCSADHTVKIWNTKK---FNVV 242
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 501
+ GH + C FS D ++++G + WD +T H
Sbjct: 243 QTLNGHQRWVWDCA--FSNDSAYLVTGSSDHLSRLWDLHQGDAVKTYSGH 290
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 199 (75.1 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 67/250 (26%), Positives = 112/250 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 341
GH+ AV + + DG + T S D IK W+T G++IR G ++ L +
Sbjct: 239 GHTLAVTCVKWGGDGIIY-TGSQDCTIKMWETTQGKLIRELK-GHGHWINSLALSTEY-- 294
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
+L G D Q+ N +E + L N T DS R V+ SDD ++ +WE +
Sbjct: 295 VLRTGAFDHTGRQYPPN-----EEKQKALERYNK-TKGDSPERLVSGSDDFTMFLWEPSV 348
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS-TRERFQLNKKKRFAGHIVA 460
K H + + P+ W+A+ S D + +++ +F F GH+
Sbjct: 349 SKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTV----FRGHV-- 402
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G QV++S D R ++SG + W+ ++ K+ + L H +W P + KV +
Sbjct: 403 GPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSP-DGEKVVS 461
Query: 521 CGWDGLIKYW 530
G D ++K W
Sbjct: 462 GGKDRVLKLW 471
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 32/117 (27%), Positives = 62/117 (52%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 341
GH + V + F DG +AS+DK+++ W+ TGQ + F G + V +++ D +
Sbjct: 358 GHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFR-GHVGPVYQVSWSADSR- 415
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+LL+G D + W++ TK++ Q+ H V + + + V+ D+ L++W+
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C +T GH++AV +SF DG + + S D ++ WD T + T G +V+ +
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK-GHKNWVLTVA 158
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEIT-QEYDQHLGAVNTITFVDSN-----RRFVTS 388
D ++ L++G +I W+ E+ H + I++ + RRFVTS
Sbjct: 159 WSPDGKH-LVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTS 217
Query: 389 SDDKSLRVWE 398
S D R+W+
Sbjct: 218 SKDGDARIWD 227
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 200 (75.5 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 64/261 (24%), Positives = 114/261 (43%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI-PYVV 331
H T +GH K V I + D + LT ++ I+ WD ++G + + G I P
Sbjct: 308 HISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISC 367
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
PD Q I+ AGM+D+ I WD++ +E Q V+ I D + V+ D
Sbjct: 368 GWYPDG--QGII-AGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKD 424
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
+ +++ V + I E M + S SL + ++ L+ +I +++ ++
Sbjct: 425 SVISLFDREATVE-RLIEEEDM--ITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKI--V 479
Query: 452 KRFAGHIVAGYACQVNFSPDGR-FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-E 509
R+ GH + + + F + F+ SG + + + W + K+ L H G + C
Sbjct: 480 SRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGA-VNCVS 538
Query: 510 WHPLEQSKVATCGWDGLIKYW 530
W P +A+ DG I+ W
Sbjct: 539 WSPTNLHMLASASDDGTIRIW 559
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 198 (74.8 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 62/221 (28%), Positives = 97/221 (43%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVV 331
GK + GH VR ++ + D+ +K WD E +VIR + G + Y +
Sbjct: 204 GKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYH-GHLSAVYSL 262
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
L+P D +L D WDM TK H V ++ +N + +T S D
Sbjct: 263 ALHPTID---VLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHD 319
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNK 450
++R+W+ + ++ H S+ SI LHP+ A+ S DN I + E +F N
Sbjct: 320 STVRLWDLAAGKSVCTLTN-HKKSVRSIVLHPSLYMFASASPDN-IKQWRCPEGKFVQN- 376
Query: 451 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 491
+GH + C S +G V GD G +FWDW++
Sbjct: 377 ---ISGH-TSIVNCMAANS-EGVLVSGGDN-GTMFFWDWRT 411
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 39/174 (22%), Positives = 75/174 (43%)
Query: 269 KSTFHG--KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
K +H K R GH VR I+ F T + D+ IK WD +G+ ++ TG
Sbjct: 155 KPKWHAPWKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGK-LKLSLTGH 213
Query: 327 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV 386
+ V+ K L + D+++ WD+ ++ + Y HL AV ++ +
Sbjct: 214 VS-TVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLA 272
Query: 387 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
TS D + R+W+ + ++ H +++ S+ + S D+ + ++
Sbjct: 273 TSGRDSTARIWDMRTKANVHTLTG-HTNTVASVVAQATNPQIITGSHDSTVRLW 325
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 54/189 (28%), Positives = 90/189 (47%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD--TETGQ-VIRTFST 324
D ST G C+ T+ GH+ VR I NDGT F +AS D+ + W T++ + V+R
Sbjct: 219 DIST--GYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEH 276
Query: 325 GK-----IPYVVKLN-----PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVN 374
P N P+ + +IL +G D+ I W++NT ++ H V
Sbjct: 277 AVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVR 336
Query: 375 TITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD 434
+ F + ++ +DDK+LRVWE +K I E H H + +++ H + ++ S+D
Sbjct: 337 GLAFHPKGKYLISVADDKTLRVWELSAQRCMKAI-EAHEHFVSTVAFHQTSPFVITGSVD 395
Query: 435 NQILIYSTR 443
++ R
Sbjct: 396 MSCKVWECR 404
Score = 164 (62.8 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 64/272 (23%), Positives = 111/272 (40%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT-ETGQVIRTFSTGK--IPYV 330
G+ RT GH+ AV DI+ G + ++ S D +IK WD +T +++ + + V
Sbjct: 138 GQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSV 197
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
L P D +L+ D I QWD++T + H V I + F ++S
Sbjct: 198 TFL-PTGD---FVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASL 253
Query: 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNT---NWLAAQSLDNQ--ILIYSTRER 445
D+++ VW F K + H H++ + P+T N Q N IL +R+R
Sbjct: 254 DQTVTVWSFATKSA-KLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDR 312
Query: 446 FQLNKKKRFAGHIVAGYACQVN------FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
+ G ++ N F P G++++S + W+ + + + ++
Sbjct: 313 -SIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIE 371
Query: 500 CHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
HE +H V T D K W+
Sbjct: 372 AHEHFVSTVAFHQTSPF-VITGSVDMSCKVWE 402
Score = 153 (58.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 62/262 (23%), Positives = 106/262 (40%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD-DKQ 340
GH + + F T + S D IK WD ETGQ+ RT G V + D KQ
Sbjct: 104 GHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLK-GHTDAVNDIAIDAAGKQ 162
Query: 341 NILLAGMSDKKIVQWDMN-TKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
L++ SD I WD T + + H V+++TF+ + +++S D +++ W+
Sbjct: 163 --LVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDI 220
Query: 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS--TRERFQLNKKKRFAGH 457
+ Y H + I + + A+ SLD + ++S T+ + + A
Sbjct: 221 STGYCV-YTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVE 279
Query: 458 IV-----AGYACQVNFSPDGR---FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCE 509
V Y P+G + SG + W+ + V TL HE G
Sbjct: 280 CVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLA 339
Query: 510 WHPLEQSKVATCGWDGLIKYWD 531
+HP + ++ D ++ W+
Sbjct: 340 FHPKGKYLISVAD-DKTLRVWE 360
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 70/266 (26%), Positives = 107/266 (40%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVK 332
K T GH ++RDI + D +K WD E +VIR + G + Y +
Sbjct: 319 KLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYH-GHLSGVYCLS 377
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
L+P D +L++G D + WD+ TK H G V +I + V+ S DK
Sbjct: 378 LHPSLD---LLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDK 434
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
+R+W+ ++ H S+ S+S+HP + DN + F N
Sbjct: 435 MIRLWDLNNGKCRISLTH-HKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAEFDRNITG 493
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL--KCHEGVCIGCEW 510
F I Q + D ++ G G+ F+DW S + TL K G + CE
Sbjct: 494 -FNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGT-VECEN 551
Query: 511 HPLE------QSKVATCGWDGLIKYW 530
L +S++ T D IK W
Sbjct: 552 STLSMAFDKSESRLITTHGDKSIKIW 577
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 44/196 (22%), Positives = 81/196 (41%)
Query: 336 DDDKQNILLA-GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
D D N A G +D+ I WD+ + ++ H+ ++ I N + +D +
Sbjct: 293 DVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRV 352
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
+ W+ VI+ H+ + +SLHP+ + L + D + ++ R + +
Sbjct: 353 KCWDLEYNKVIRDY-HGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGH 411
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
G +++ C + P V+SG + WD + K +L H+ HP E
Sbjct: 412 TGTVMS--ICSQSVEPQ---VVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFE 466
Query: 515 QSKVATCGWDGLIKYW 530
S +CG D +K W
Sbjct: 467 YS-FCSCGTDN-VKVW 480
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 40/164 (24%), Positives = 73/164 (44%)
Query: 369 HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 428
H G VN + SN F T S+D+ +++W+ +K H++S+ I + +L
Sbjct: 285 HSGWVNCVDVDISNEWFATGSNDRLIKIWDLA-SCKLKLTLTGHINSIRDIKISKKNPYL 343
Query: 429 AAQSLDNQILIYSTRERFQLNKKKR-FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
+ DN++ + + NK R + GH+ +G C ++ P +MSG + W
Sbjct: 344 FSCGEDNRVKCWD----LEYNKVIRDYHGHL-SGVYC-LSLHPSLDLLMSGGRDAVVRVW 397
Query: 488 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
D ++ L H G + +E +V + D +I+ WD
Sbjct: 398 DIRTKSSVFVLSGHTGTVMSICSQSVEP-QVVSGSQDKMIRLWD 440
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 40/171 (23%), Positives = 72/171 (42%)
Query: 272 FHGKCMRTYMGHSKAVR--DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY 329
F K R +GHS V D+ N+ F T S D+ IK WD + ++ T TG I
Sbjct: 274 FPYKLYRVILGHSGWVNCVDVDISNEW--FATGSNDRLIKIWDLASCKLKLTL-TGHINS 330
Query: 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
+ + + G D ++ WD+ ++ ++Y HL V ++ S ++
Sbjct: 331 IRDIKISKKNPYLFSCG-EDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGG 389
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
D +RVW+ + ++ H ++ SI + + S D I ++
Sbjct: 390 RDAVVRVWDIRTKSSV-FVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLW 439
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 70/266 (26%), Positives = 107/266 (40%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVK 332
K T GH ++RDI + D +K WD E +VIR + G + Y +
Sbjct: 319 KLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYH-GHLSGVYCLS 377
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
L+P D +L++G D + WD+ TK H G V +I + V+ S DK
Sbjct: 378 LHPSLD---LLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDK 434
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
+R+W+ ++ H S+ S+S+HP + DN + F N
Sbjct: 435 MIRLWDLNNGKCRISLTH-HKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAEFDRNITG 493
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL--KCHEGVCIGCEW 510
F I Q + D ++ G G+ F+DW S + TL K G + CE
Sbjct: 494 -FNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGT-VECEN 551
Query: 511 HPLE------QSKVATCGWDGLIKYW 530
L +S++ T D IK W
Sbjct: 552 STLSMAFDKSESRLITTHGDKSIKIW 577
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 44/196 (22%), Positives = 81/196 (41%)
Query: 336 DDDKQNILLA-GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
D D N A G +D+ I WD+ + ++ H+ ++ I N + +D +
Sbjct: 293 DVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRV 352
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
+ W+ VI+ H+ + +SLHP+ + L + D + ++ R + +
Sbjct: 353 KCWDLEYNKVIRDY-HGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGH 411
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
G +++ C + P V+SG + WD + K +L H+ HP E
Sbjct: 412 TGTVMS--ICSQSVEPQ---VVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFE 466
Query: 515 QSKVATCGWDGLIKYW 530
S +CG D +K W
Sbjct: 467 YS-FCSCGTDN-VKVW 480
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 40/164 (24%), Positives = 73/164 (44%)
Query: 369 HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 428
H G VN + SN F T S+D+ +++W+ +K H++S+ I + +L
Sbjct: 285 HSGWVNCVDVDISNEWFATGSNDRLIKIWDLA-SCKLKLTLTGHINSIRDIKISKKNPYL 343
Query: 429 AAQSLDNQILIYSTRERFQLNKKKR-FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
+ DN++ + + NK R + GH+ +G C ++ P +MSG + W
Sbjct: 344 FSCGEDNRVKCWD----LEYNKVIRDYHGHL-SGVYC-LSLHPSLDLLMSGGRDAVVRVW 397
Query: 488 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
D ++ L H G + +E +V + D +I+ WD
Sbjct: 398 DIRTKSSVFVLSGHTGTVMSICSQSVEP-QVVSGSQDKMIRLWD 440
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 40/171 (23%), Positives = 72/171 (42%)
Query: 272 FHGKCMRTYMGHSKAVR--DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY 329
F K R +GHS V D+ N+ F T S D+ IK WD + ++ T TG I
Sbjct: 274 FPYKLYRVILGHSGWVNCVDVDISNEW--FATGSNDRLIKIWDLASCKLKLTL-TGHINS 330
Query: 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
+ + + G D ++ WD+ ++ ++Y HL V ++ S ++
Sbjct: 331 IRDIKISKKNPYLFSCG-EDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGG 389
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
D +RVW+ + ++ H ++ SI + + S D I ++
Sbjct: 390 RDAVVRVWDIRTKSSV-FVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLW 439
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 190 (71.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 62/255 (24%), Positives = 114/255 (44%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G C+ Y GH + D+ D TKF + DK I+ WD TG+V R G + + +
Sbjct: 46 GACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNTGKVDRRLG-GHLAQINTI 104
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLG-AVNTITFVD-SNRRFVTSSDD 391
++D +IL +G D K+ WD + + Q L A ++++ +D + VT S D
Sbjct: 105 RYNEDS-SILASGSFDSKVRLWDCRSNSFSPI--QVLADAKDSVSSIDIAEHLIVTGSTD 161
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
+LR ++ + S+ H + S+ + ++ SL++ I + +E ++ K
Sbjct: 162 GTLRTYDIRKGTLS---SDYFSHPITSVKTSKSASFSLISSLNSSIHLLD-QETGKILKS 217
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS-CKVFRTLKCHEGVCIGCEW 510
+ G Y + +F+ V SG +GK + WD ++ ++ T +
Sbjct: 218 --YIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDLENETQITSTSVVGTPIVTDISC 275
Query: 511 HP-LEQSKVATCGWD 524
HP ++ +AT D
Sbjct: 276 HPTMDDFIIATVHGD 290
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 26/109 (23%), Positives = 52/109 (47%)
Query: 290 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 349
+ + G L A ++ ++ W+ ++G I ++ G ++ L+ D G D
Sbjct: 20 VKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYA-GHGHEILDLDLVYDSTKFASCG-GD 77
Query: 350 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
K I WD+NT ++ + HL +NTI + + + + S D +R+W+
Sbjct: 78 KFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWD 126
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 196 (74.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 60/256 (23%), Positives = 110/256 (42%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 336
R + GH A+ + +G + TAS+D + W+ + + R + V+ +P
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
N+L + D+ + W + + E+ H V ++ F + T+S+DKS++V
Sbjct: 72 G---NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W + Y H H + P+ + + S D I I+ T + +N F+
Sbjct: 129 WSMYRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN---FSD 184
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQ 515
+ G+A V+F+P G + S + WD + K+ + + H G + C +HP +
Sbjct: 185 SV--GFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG-VNCISFHPSDN 241
Query: 516 SKVATCGWDGLIKYWD 531
V T DG +K D
Sbjct: 242 YLV-TASSDGTLKILD 256
Score = 189 (71.6 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 53/211 (25%), Positives = 93/211 (44%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPD 336
+ H+ VR + F DG TAS DK+IK W + + +S + + V K +PD
Sbjct: 98 FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFL--YSLYRHTHWVRCAKFSPD 155
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++++ DK I WD K+ + +G N + F S ++ D++++V
Sbjct: 156 G---RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKV 212
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W+ + ++++ + H + IS HP+ N+L S D + I E + + G
Sbjct: 213 WDVRVNKLLQHY-QVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQ---G 268
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
H G V+FS G SG + + W
Sbjct: 269 H--TGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 186 (70.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 50/174 (28%), Positives = 80/174 (45%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IP 328
S + + + + H+ VR F DG ++ S DK IK WDT Q + FS
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 189
Query: 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
V NP I AG SD+ + WD+ ++ Q Y H G VN I+F S+ VT+
Sbjct: 190 NFVDFNPSGTC--IASAG-SDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTA 246
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
S D +L++ + + + Y + H + ++S A+ D Q+L++ T
Sbjct: 247 SSDGTLKILDL-LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 49/231 (21%), Positives = 91/231 (39%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
H + R Y+GH V + F G +AS D+ ++ W + F P V
Sbjct: 50 HARAYR-YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAP-VRS 107
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
++ D Q L DK I W M + +H V F R V+ S+DK
Sbjct: 108 VDFSADGQ-FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++++W+ + S+ + + +P+ +A+ D + ++ R L +
Sbjct: 167 TIKIWDTTNKQCVNNFSDS-VGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 225
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
+G G C ++F P ++++ +G D ++ TL+ H G
Sbjct: 226 VHSG----GVNC-ISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTG 271
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 197 (74.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 61/253 (24%), Positives = 111/253 (43%)
Query: 288 RDISFC--NDGTKFL-TASYDKNIKYWDTETGQVIRTF-----STGKIPYVVKLNPDDDK 339
R IS+C + +K L TAS+ K W +IRT + G I + + ++
Sbjct: 217 RPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEE 276
Query: 340 QNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
++ +A + D + W +++ E + + H V +T+ S R T+ D S R+W+
Sbjct: 277 SDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWD 336
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA-GH 457
+ I + E H + + HP+ + LD+ ++ R + F GH
Sbjct: 337 LEVQEEILH-QEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRT----GRCVMFLEGH 391
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 517
I Y+ +NFSP+G V +G G+ C WD + + T+ H+ + ++ P +
Sbjct: 392 IKEIYS--INFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHY 449
Query: 518 VATCGWDGLIKYW 530
+ T +D K W
Sbjct: 450 LLTGAYDNTAKIW 462
Score = 163 (62.4 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 63/263 (23%), Positives = 101/263 (38%)
Query: 277 MRTYMGHSKAVRDISFCNDGTKFLTAS--------YDKNIKYWDTETGQVIRTFSTGKIP 328
+RT GH+ V ISF T L S D ++K W ++ + I G
Sbjct: 251 IRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIE-GHSM 309
Query: 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
V ++ + L D WD+ +E + H V+ + F T
Sbjct: 310 RVARVTWHPSGR-FLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTG 368
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
D RVW+ + ++ E H+ + SI+ PN +A S DN ++ R+R +
Sbjct: 369 GLDSFARVWDLRTGRCVMFL-EGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCI 427
Query: 449 NKKKRFAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
H V F P DG ++++G + W +TL HEG +G
Sbjct: 428 YT---IPAH--QNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMG 482
Query: 508 CEWHPLEQSKVATCGWDGLIKYW 530
+ P + +ATC +D K W
Sbjct: 483 VDLSP-DGQLIATCSYDRTFKLW 504
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 198 (74.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 49/189 (25%), Positives = 87/189 (46%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+ D I WD+ + T Y H V + + F + S D++ R+W F
Sbjct: 375 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRT 434
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462
++ I H+ + + HPN+N+LA S D + ++S + Q N + F GH G
Sbjct: 435 YPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ---QGNSVRLFTGH--RGP 488
Query: 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 522
+ FSP+G+++ S + + WD S +++ L+ H + P + S +A+
Sbjct: 489 VLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP-DSSLIASAS 547
Query: 523 WDGLIKYWD 531
D ++ WD
Sbjct: 548 MDNSVRVWD 556
Score = 176 (67.0 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 41/190 (21%), Positives = 89/190 (46%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
Y GH+ V D+ F + S+D+ + W + +R ++ G + V VK +P+
Sbjct: 398 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNS 456
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
N L G +DK + W + + H G V ++ F + + ++ +D+ L++W
Sbjct: 457 ---NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 513
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ + K + H ++ S++ P+++ +A+ S+DN + ++ R + +G
Sbjct: 514 DLASGTLYKEL-RGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGE 572
Query: 458 IVAGYACQVN 467
+V Y Q++
Sbjct: 573 LVGVYTGQMS 582
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/223 (24%), Positives = 90/223 (40%)
Query: 267 EDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
+D+ G M+ GH V F D + L+ S D +I+YWD G T
Sbjct: 343 DDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQG 400
Query: 327 IPYVVKLNPDDDKQNILLA-GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
Y V + D ++ A G D+ W + + Y HL V+ + F ++
Sbjct: 401 HAYPV-WDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 459
Query: 386 VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445
T S DK++R+W ++ + H + S++ PN +LA+ D ++ ++
Sbjct: 460 ATGSTDKTVRLWSAQQGNSVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 518
Query: 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488
L K+ R GH + FSPD + S + WD
Sbjct: 519 -TLYKELR--GH--TDNITSLTFSPDSSLIASASMDNSVRVWD 556
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 196 (74.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 65/250 (26%), Positives = 111/250 (44%)
Query: 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 343
SK V + + D K ++ D IK WD T + R TG V+ L D+ ++
Sbjct: 204 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRIL-TGHTGSVLCLQYDE---RVI 257
Query: 344 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP- 402
+ G SD + WD+NT E+ H AV + F +N VT S D+S+ VW+ P
Sbjct: 258 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPT 315
Query: 403 -VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+ ++ + H ++ + + ++ + S D I +++T + GH G
Sbjct: 316 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST---CEFVRTLNGH-KRG 369
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 370 IAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVSG 423
Query: 522 GWDGLIKYWD 531
+DG IK WD
Sbjct: 424 AYDGKIKVWD 433
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 61/228 (26%), Positives = 98/228 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVV 331
G+ T GH VR ++ + + DK +K WD ET +VIR + G + Y +
Sbjct: 233 GRLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYH-GHLSGVYTL 291
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
L+P D +L+ G D WDM T+ H G V+ + +++ + +T S D
Sbjct: 292 ALHPTLD---VLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLD 348
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNK 450
++R+W+ + ++ H + +++ HP T + A I + E F N
Sbjct: 349 STVRMWDLAAGKTMGVLTH-HKKGVRALATHP-TEFTFASGSAGSIKQWKCPEGAFMQN- 405
Query: 451 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498
F GH VN D SG G FWDWK+ F++L
Sbjct: 406 ---FEGHNSIINTLSVN---DQNVFFSGADNGSMSFWDWKTGHRFQSL 447
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 38/124 (30%), Positives = 56/124 (45%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
K MR GH VR ++ D F + + D+ IK WD +G+ +R TG I V L
Sbjct: 192 KLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGR-LRLTLTGHISTVRGLA 250
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
+ L + DK + WD+ T ++ + Y HL V T+ + VT D
Sbjct: 251 VSP-RHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVA 309
Query: 395 RVWE 398
RVW+
Sbjct: 310 RVWD 313
Score = 127 (49.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 46/214 (21%), Positives = 87/214 (40%)
Query: 317 QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTI 376
+++R S G + +V L + D + +G D+ I WD+ + + H+ V +
Sbjct: 192 KLMRVIS-GHLGWVRALAVEPDNK-WFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGL 249
Query: 377 TFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQ 436
+ + ++DK ++ W+ VI++ H+ + +++LHP + L D
Sbjct: 250 AVSPRHPYLFSCAEDKMVKCWDLETNKVIRHY-HGHLSGVYTLALHPTLDVLVTGGRDGV 308
Query: 437 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFR 496
++ R R ++ G V+ CQ P V++G + WD + K
Sbjct: 309 ARVWDMRTRSNIHVLSGHTG-TVSELVCQ-EADPQ---VITGSLDSTVRMWDLAAGKTMG 363
Query: 497 TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530
L H+ HP E + + G G IK W
Sbjct: 364 VLTHHKKGVRALATHPTEFTFAS--GSAGSIKQW 395
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 190 (71.9 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 61/249 (24%), Positives = 114/249 (45%)
Query: 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 345
AVR + F DG LT DK +K W+ G ++RT+S G V+ D + L +
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAAGSFDNSS-LCS 84
Query: 346 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI--PV 403
G DK +V WD+ + ++ +++ H G VNT+ F + ++ S D S+R W+ P
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPE 144
Query: 404 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 463
++ + E + S+ + + + A S+D ++ R+ L + F+ ++ +
Sbjct: 145 PVQTLDEAR-DGVSSVKVSDHE--ILAGSVDGRV------RRYDLRMGQLFSDYVGSPIT 195
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ-SKVATCG 522
C FS DG+ + + D + ++ K H+ + E+ + V +C
Sbjct: 196 CTC-FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSCS 254
Query: 523 WDGLIKYWD 531
DG + +WD
Sbjct: 255 EDGKVFFWD 263
Score = 172 (65.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 63/262 (24%), Positives = 105/262 (40%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 331
G +RTY GH V D + D + + DK + WD +GQV+R F GK+ V
Sbjct: 57 GTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVN-TV 115
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDSNRRFVTSS 389
+ N ++ ++L+G D I WD ++ E Q D+ V+++ S+ + S
Sbjct: 116 QFN---EEATVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSVKV--SDHEILAGS 170
Query: 390 DDKSLRVWEFGIPVVIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
D +R ++ + + Y+ P + + SLD+ + + L
Sbjct: 171 VDGRVRRYDLRMGQLFSDYVGSP----ITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELL 226
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
+ K GH Y S V+S +GK +FWD + L GV
Sbjct: 227 GEYK---GHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSGVVQSL 283
Query: 509 EWHPLEQSKVATCGWDGLIKYW 530
+HP E + G G ++ W
Sbjct: 284 AYHPTEPCLLTAMG--GSVQCW 303
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 196 (74.1 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 65/252 (25%), Positives = 115/252 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + D K ++ D +IK WD + + ++ TG V+ L D+ +
Sbjct: 219 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVL-TGHTGSVLCLQYDE---RV 272
Query: 343 LLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
++ G SD + + WD+NT E+ H AV + F SN VT S D+S+ VW+
Sbjct: 273 IVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMAS 330
Query: 402 P--VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459
P + ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 331 PTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-K 384
Query: 460 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVA 519
G AC + + R V+SG + WD + R L+ HE + + C + ++
Sbjct: 385 RGIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIV 438
Query: 520 TCGWDGLIKYWD 531
+ +DG IK WD
Sbjct: 439 SGAYDGKIKVWD 450
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R +GH AV + F D ++AS D+ IK W T T + +RT + G + L D
Sbjct: 338 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLN-GHKRGIACLQYRD 394
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++++G SD I WD+ + + H V I F N+R V+ + D ++VW
Sbjct: 395 ---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 449
Query: 398 E 398
+
Sbjct: 450 D 450
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 196 (74.1 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 64/251 (25%), Positives = 114/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + D K ++ D +IK WD +T + ++ TG V+ L D+ +
Sbjct: 224 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKQTLECLKIL-TGHTGSVLCLQYDE---RV 277
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
++ G SD + WD+N+ E+ H AV + F N VT S D+S+ VW+ P
Sbjct: 278 IVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWDMASP 335
Query: 403 --VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 336 TDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 389
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 390 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 443
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 444 GAYDGKIKVWD 454
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R +GH AV + F D ++AS D+ IK W T T + +RT + G + L D
Sbjct: 342 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLN-GHKRGIACLQYRD 398
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++++G SD I WD+ + + H V I F N+R V+ + D ++VW
Sbjct: 399 ---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 453
Query: 398 E 398
+
Sbjct: 454 D 454
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD--TETGQVIRTFSTGKIPYVV 331
G+ + T + H++AV + FCN G +T S D++I WD + T +R G V
Sbjct: 295 GEVLNTLIHHNEAVLHLRFCN-GL-MVTCSKDRSIAVWDMASPTDISLRRVLVGHRA-AV 351
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+ DDK + +G D+ I W +T E + + H + + + D R V+ S D
Sbjct: 352 NVVDFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 407
Query: 392 KSLRVWEFGIPVVIKYISEPH 412
++R+W+ ++ + E H
Sbjct: 408 NTIRLWDIECGACLRVL-EGH 427
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 195 (73.7 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 64/251 (25%), Positives = 114/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + +D K ++ D +IK WD + + ++ TG V+ L D+ +
Sbjct: 190 NSKGVYCLQYDDD--KIISGLRDNSIKIWDKSSLECLKVL-TGHTGSVLCLQYDE---RV 243
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG-- 400
++ G SD + WD+NT E+ H AV + F SN VT S D+S+ VW+
Sbjct: 244 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASA 301
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 302 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 355
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 356 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 409
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 410 GAYDGKIKVWD 420
Score = 117 (46.2 bits), Expect = 0.00092, P = 0.00092
Identities = 33/139 (23%), Positives = 64/139 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G+ + T + H++AV + F N G +T S D++I WD + I T + + +
Sbjct: 261 GEVLNTLIHHNEAVLHLRFSN-GL-MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAV 317
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
N D +++ D+ I W +T E + + H + + + D R V+ S D +
Sbjct: 318 NVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNT 375
Query: 394 LRVWEFGIPVVIKYISEPH 412
+R+W+ ++ + E H
Sbjct: 376 IRLWDIECGACLRVL-EGH 393
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 196 (74.1 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 65/250 (26%), Positives = 111/250 (44%)
Query: 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 343
SK V + + D K ++ D IK WD T + R TG V+ L D+ ++
Sbjct: 262 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRIL-TGHTGSVLCLQYDE---RVI 315
Query: 344 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP- 402
+ G SD + WD+NT E+ H AV + F +N VT S D+S+ VW+ P
Sbjct: 316 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPT 373
Query: 403 -VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+ ++ + H ++ + + ++ + S D I +++T + GH G
Sbjct: 374 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST---CEFVRTLNGH-KRG 427
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 428 IAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVSG 481
Query: 522 GWDGLIKYWD 531
+DG IK WD
Sbjct: 482 AYDGKIKVWD 491
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 196 (74.1 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 65/250 (26%), Positives = 111/250 (44%)
Query: 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 343
SK V + + D K ++ D IK WD T + R TG V+ L D+ ++
Sbjct: 267 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRIL-TGHTGSVLCLQYDE---RVI 320
Query: 344 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP- 402
+ G SD + WD+NT E+ H AV + F +N VT S D+S+ VW+ P
Sbjct: 321 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPT 378
Query: 403 -VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+ ++ + H ++ + + ++ + S D I +++T + GH G
Sbjct: 379 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST---CEFVRTLNGH-KRG 432
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 433 IAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVSG 486
Query: 522 GWDGLIKYWD 531
+DG IK WD
Sbjct: 487 AYDGKIKVWD 496
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 193 (73.0 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 59/224 (26%), Positives = 106/224 (47%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST-GKIPYVVKLNPDDD 338
+ H+ +VR + F DG LTAS D++IK W ++I T + +PD
Sbjct: 98 FRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQ 157
Query: 339 KQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
L+ +SD + V+ WD +++++ + + G + + F S+ T+S D ++RVW
Sbjct: 158 ----LMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVW 213
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ ++++ + H ++ ++S HP+ N L S D+ + I E L GH
Sbjct: 214 DIRTHTLLQHY-QVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYT---LHGH 269
Query: 458 IVAGYACQVNFSPDG-RFVMSG-DGEGKCWFWDWKSCKVFRTLK 499
G A V+FS G +F +G D + W ++ S R L+
Sbjct: 270 --QGSASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYSRVLQ 311
Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 46/174 (26%), Positives = 77/174 (44%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIP 328
S K + T H+ VR F DG ++ S D+ +K WD + Q+I TF G
Sbjct: 130 SVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYS 189
Query: 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
V +P + SD + WD+ T + Q Y H AVN ++F S +T+
Sbjct: 190 SYVDFHPSS---TCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTA 246
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
S D +L++ + + + Y H S +S + + A+ D Q++++ T
Sbjct: 247 SSDSTLKILDL-LEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRT 299
Score = 176 (67.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 58/253 (22%), Positives = 107/253 (42%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYW-DTETGQ-VIRTFSTGKIPYVVKLNPDD 337
+ GH AV + F ++S DK ++ W + G+ V+ TG + V
Sbjct: 56 FTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCF---SA 112
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
D Q++L A D+ I W ++ ++I +H V F + V+ SDD+++++W
Sbjct: 113 DGQSLLTAS-DDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLW 171
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ +I EP +S + HP++ +A S DN + ++ R L + + H
Sbjct: 172 DASSRQLIHTFCEPGGYSS-YVDFHPSSTCIATASSDNTVRVWDIRTHTLL---QHYQVH 227
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 517
A A ++F P G +++ + D ++ TL H+G C +
Sbjct: 228 SAAVNA--LSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSA-SCVSFSRSGDQ 284
Query: 518 VATCGWDGLIKYW 530
A+ G D + W
Sbjct: 285 FASAGSDQQVMVW 297
Score = 170 (64.9 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 52/255 (20%), Positives = 105/255 (41%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPD 336
R + GH A+ + F G + + S D ++ W+ + F+ K V+ +P
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++L + DK + W + K + + H G+V ++ F + +T+SDD+S+++
Sbjct: 72 ---AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKL 128
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W +I + E H + + P+ + + S D + ++ R QL G
Sbjct: 129 WSVHRQKIICTLRE-HNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSR-QLIHTFCEPG 186
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS 516
GY+ V+F P + + + WD ++ + + + H +HP +
Sbjct: 187 ----GYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHP-SGN 241
Query: 517 KVATCGWDGLIKYWD 531
+ T D +K D
Sbjct: 242 HLLTASSDSTLKILD 256
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 189 (71.6 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 69/261 (26%), Positives = 116/261 (44%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
RT AVR + F DG LT DK++K W G +++T+S G Y V L+ D
Sbjct: 19 RTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYS-GH-GYEV-LDADG 75
Query: 338 DKQNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
N L S DK ++ WD+ + ++T++ H G VN + F + ++ S D ++R
Sbjct: 76 SYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRC 135
Query: 397 WEFGI----PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
W+ P+ I S+ + S+ +S H L S+D ++ R+ L +
Sbjct: 136 WDTRSRRMEPIQILDESQDGISSL-KVSEHE----LLTGSVDGRV------RRYDLRMGQ 184
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEW 510
+I + C V FS DG+ +S + D + ++ H +G + C
Sbjct: 185 LQVDYIGSPITC-VCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCL 243
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
+ + V +C DG + YWD
Sbjct: 244 TD-KDTHVLSCSEDGHVYYWD 263
Score = 176 (67.0 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 59/266 (22%), Positives = 112/266 (42%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKI 327
S G ++TY GH V D D ++ + S DK + WD +GQV R GK+
Sbjct: 53 SVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKV 112
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDSNRRF 385
V+ N ++ ++L+G D + WD ++ E Q D+ ++++ S
Sbjct: 113 N-CVQFN---EEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKV--SEHEL 166
Query: 386 VTSSDDKSLRVWEFGI-PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
+T S D +R ++ + + + YI P + + + + SLD+ + +
Sbjct: 167 LTGSVDGRVRRYDLRMGQLQVDYIGSP----ITCVCFSRDGQCTLSSSLDSTVRLLDKST 222
Query: 445 RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 504
L + ++GH+ GY + V+S +G ++WD + L + V
Sbjct: 223 GEMLGE---YSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAV 279
Query: 505 CIGCEWHPLEQSKVATCGWDGLIKYW 530
+HP E ++ T +G ++ W
Sbjct: 280 VQSLSFHPTEP-RLLT-SMEGRVQVW 303
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 195 (73.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 64/251 (25%), Positives = 114/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + +D K ++ D +IK WD + + ++ TG V+ L D+ +
Sbjct: 224 NSKGVYCLQYDDD--KIISGLRDNSIKIWDKSSLECLKVL-TGHTGSVLCLQYDE---RV 277
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG-- 400
++ G SD + WD+NT E+ H AV + F SN VT S D+S+ VW+
Sbjct: 278 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASA 335
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 336 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 389
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 390 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 443
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 444 GAYDGKIKVWD 454
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 196 (74.1 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 65/250 (26%), Positives = 111/250 (44%)
Query: 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 343
SK V + + D K ++ D IK WD T + R TG V+ L D+ ++
Sbjct: 303 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRIL-TGHTGSVLCLQYDE---RVI 356
Query: 344 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP- 402
+ G SD + WD+NT E+ H AV + F +N VT S D+S+ VW+ P
Sbjct: 357 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPT 414
Query: 403 -VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+ ++ + H ++ + + ++ + S D I +++T + GH G
Sbjct: 415 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST---CEFVRTLNGH-KRG 468
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 469 IAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVSG 522
Query: 522 GWDGLIKYWD 531
+DG IK WD
Sbjct: 523 AYDGKIKVWD 532
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 196 (74.1 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 65/250 (26%), Positives = 111/250 (44%)
Query: 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 343
SK V + + D K ++ D IK WD T + R TG V+ L D+ ++
Sbjct: 303 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRIL-TGHTGSVLCLQYDE---RVI 356
Query: 344 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP- 402
+ G SD + WD+NT E+ H AV + F +N VT S D+S+ VW+ P
Sbjct: 357 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPT 414
Query: 403 -VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+ ++ + H ++ + + ++ + S D I +++T + GH G
Sbjct: 415 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST---CEFVRTLNGH-KRG 468
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 469 IAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVSG 522
Query: 522 GWDGLIKYWD 531
+DG IK WD
Sbjct: 523 AYDGKIKVWD 532
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 198 (74.8 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 63/258 (24%), Positives = 116/258 (44%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R S+ V+ I F LT Y ++ W ET +I+TF +P V+
Sbjct: 7 RQLFARSERVKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVP--VRAGRFI 64
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRV 396
++N ++ G D ++ ++ NT E ++ H + +I V + FV T+SDD ++++
Sbjct: 65 ARKNWIVCGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIA-VHPTQPFVLTASDDMTIKL 123
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 455
W++ + E H H + ++++P +TN A+ LD + I+S +
Sbjct: 124 WDWEKGWKCVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSP---HANFTLE 180
Query: 456 GHIVAGYACQVNFSP--DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH-EGVCIGCEWHP 512
H G V++ P D ++++ + WD+ + + TL+ H V C +HP
Sbjct: 181 AHETKGVN-HVDYYPQADKPYLLTTSDDKTVKVWDYTTKALIATLEGHTSNVSFAC-YHP 238
Query: 513 LEQSKVATCGWDGLIKYW 530
E + + DG IK W
Sbjct: 239 -ELPVIISGSEDGTIKIW 255
Score = 120 (47.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 32/126 (25%), Positives = 53/126 (42%)
Query: 275 KCMRTYMGHSKAVRDISFC-NDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
KC++ Y GHS V ++ D F +A D+ +K W + T + V V
Sbjct: 131 KCVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSPHANFTLEAHETKGVNHV 190
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
P DK LL DK + WD TK + + H V+ + ++ S+D
Sbjct: 191 DYYPQADKP-YLLTTSDDKTVKVWDYTTKALIATLEGHTSNVSFACYHPELPVIISGSED 249
Query: 392 KSLRVW 397
++++W
Sbjct: 250 GTIKIW 255
Score = 50 (22.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 462 YACQVNFSPDGRFV-MSGDGE 481
Y ++ SP+GRFV + GDGE
Sbjct: 352 YPQTLSHSPNGRFVSVCGDGE 372
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 195 (73.7 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 64/251 (25%), Positives = 114/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + +D K ++ D +IK WD + + ++ TG V+ L D+ +
Sbjct: 239 NSKGVYCLQYDDD--KIISGLRDNSIKIWDKSSLECLKVL-TGHTGSVLCLQYDE---RV 292
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG-- 400
++ G SD + WD+NT E+ H AV + F SN VT S D+S+ VW+
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASA 350
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 351 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 404
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 405 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 458
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 459 GAYDGKIKVWD 469
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 194 (73.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 64/251 (25%), Positives = 113/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + D K ++ D +IK WD + + ++ TG V+ L D+ +
Sbjct: 207 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVL-TGHTGSVLCLQYDE---RV 260
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG-- 400
++ G SD + WD+NT E+ H AV + F SN VT S D+S+ VW+
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASA 318
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 319 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 372
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 373 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 426
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 427 GAYDGKIKVWD 437
Score = 117 (46.2 bits), Expect = 0.00097, P = 0.00097
Identities = 33/139 (23%), Positives = 64/139 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G+ + T + H++AV + F N G +T S D++I WD + I T + + +
Sbjct: 278 GEVLNTLIHHNEAVLHLRFSN-GL-MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAV 334
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
N D +++ D+ I W +T E + + H + + + D R V+ S D +
Sbjct: 335 NVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNT 392
Query: 394 LRVWEFGIPVVIKYISEPH 412
+R+W+ ++ + E H
Sbjct: 393 IRLWDIECGACLRVL-EGH 410
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 194 (73.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 64/251 (25%), Positives = 113/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + D K ++ D +IK WD + + ++ TG V+ L D+ +
Sbjct: 207 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVL-TGHTGSVLCLQYDE---RV 260
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG-- 400
++ G SD + WD+NT E+ H AV + F SN VT S D+S+ VW+
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASA 318
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 319 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 372
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 373 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 426
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 427 GAYDGKIKVWD 437
Score = 117 (46.2 bits), Expect = 0.00097, P = 0.00097
Identities = 33/139 (23%), Positives = 64/139 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G+ + T + H++AV + F N G +T S D++I WD + I T + + +
Sbjct: 278 GEVLNTLIHHNEAVLHLRFSN-GL-MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAV 334
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
N D +++ D+ I W +T E + + H + + + D R V+ S D +
Sbjct: 335 NVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNT 392
Query: 394 LRVWEFGIPVVIKYISEPH 412
+R+W+ ++ + E H
Sbjct: 393 IRLWDIECGACLRVL-EGH 410
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 194 (73.4 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 64/251 (25%), Positives = 113/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + D K ++ D +IK WD + + ++ TG V+ L D+ +
Sbjct: 226 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVL-TGHTGSVLCLQYDE---RV 279
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG-- 400
++ G SD + WD+NT E+ H AV + F SN VT S D+S+ VW+
Sbjct: 280 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASA 337
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 338 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 391
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 392 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 445
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 446 GAYDGKIKVWD 456
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 194 (73.4 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 64/251 (25%), Positives = 113/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + D K ++ D +IK WD + + ++ TG V+ L D+ +
Sbjct: 227 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVL-TGHTGSVLCLQYDE---RV 280
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG-- 400
++ G SD + WD+NT E+ H AV + F SN VT S D+S+ VW+
Sbjct: 281 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASA 338
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 339 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 392
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 393 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 446
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 447 GAYDGKIKVWD 457
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 59/256 (23%), Positives = 110/256 (42%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 336
R + GH A+ + +G + TAS+D + W+ + + R + V+ +P
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
N+L + D+ + W + + E+ H V ++ F + T+S+DKS++V
Sbjct: 72 G---NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W + Y H H + P+ + + S D I I+ T + +N F+
Sbjct: 129 WSMYRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN---FSD 184
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQ 515
+ G+A V+F+P G + S + WD + K+ + + H G + C +HP
Sbjct: 185 SV--GFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG-VNCISFHP-SG 240
Query: 516 SKVATCGWDGLIKYWD 531
+ + T DG +K D
Sbjct: 241 NYLITASSDGTLKILD 256
Score = 187 (70.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 53/211 (25%), Positives = 93/211 (44%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPD 336
+ H+ VR + F DG TAS DK+IK W + + +S + + V K +PD
Sbjct: 98 FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFL--YSLYRHTHWVRCAKFSPD 155
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++++ DK I WD K+ + +G N + F S ++ D++++V
Sbjct: 156 G---RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKV 212
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W+ + ++++ + H + IS HP+ N+L S D + I E + + G
Sbjct: 213 WDVRVNKLLQHY-QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ---G 268
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
H G V+FS G SG + + W
Sbjct: 269 H--TGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 184 (69.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 49/174 (28%), Positives = 79/174 (45%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IP 328
S + + + + H+ VR F DG ++ S DK IK WDT Q + FS
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 189
Query: 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
V NP I AG SD+ + WD+ ++ Q Y H G VN I+F S +T+
Sbjct: 190 NFVDFNPSGTC--IASAG-SDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITA 246
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
S D +L++ + + + Y + H + ++S A+ D Q+L++ T
Sbjct: 247 SSDGTLKILDL-LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 50/231 (21%), Positives = 92/231 (39%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
H + R Y+GH V + F G +AS D+ ++ W + F P V
Sbjct: 50 HARAYR-YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAP-VRS 107
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
++ D Q L DK I W M + +H V F R V+ S+DK
Sbjct: 108 VDFSADGQ-FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++++W+ + S+ + + +P+ +A+ D + ++ R L +
Sbjct: 167 TIKIWDTTNKQCVNNFSDS-VGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 225
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
+G G C ++F P G ++++ +G D ++ TL+ H G
Sbjct: 226 VHSG----GVNC-ISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 271
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 194 (73.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 64/251 (25%), Positives = 113/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + D K ++ D +IK WD + + ++ TG V+ L D+ +
Sbjct: 239 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVL-TGHTGSVLCLQYDE---RV 292
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG-- 400
++ G SD + WD+NT E+ H AV + F SN VT S D+S+ VW+
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASA 350
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 351 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 404
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 405 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 458
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 459 GAYDGKIKVWD 469
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 194 (73.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 64/251 (25%), Positives = 113/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + D K ++ D +IK WD + + ++ TG V+ L D+ +
Sbjct: 239 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVL-TGHTGSVLCLQYDE---RV 292
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG-- 400
++ G SD + WD+NT E+ H AV + F SN VT S D+S+ VW+
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASA 350
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 351 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 404
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 405 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 458
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 459 GAYDGKIKVWD 469
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 194 (73.4 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 48/189 (25%), Positives = 86/189 (45%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+ D I WD+ + T Y H V + + F + S D++ R+W F
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRT 416
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462
++ I H+ + + HPN+N+LA S D + ++S + Q N + F GH G
Sbjct: 417 YPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ---QGNSVRLFTGH--RGP 470
Query: 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 522
+ FSP+G+++ S + + WD S +++ L+ H + P + +A+
Sbjct: 471 VLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP-DSGLIASAS 529
Query: 523 WDGLIKYWD 531
D ++ WD
Sbjct: 530 MDNSVRVWD 538
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 40/190 (21%), Positives = 87/190 (45%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
Y GH+ V D+ F + S+D+ + W + +R ++ G + V VK +P+
Sbjct: 380 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNS 438
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
N L G +DK + W + + H G V ++ F + + ++ +D+ L++W
Sbjct: 439 ---NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ + K + H ++ S++ P++ +A+ S+DN + ++ R + +
Sbjct: 496 DLASGTLYKEL-RGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSE 554
Query: 458 IVAGYACQVN 467
+V Y Q++
Sbjct: 555 LVGVYTGQMS 564
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 54/223 (24%), Positives = 90/223 (40%)
Query: 267 EDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
+D+ G M+ GH V F D + L+ S D +I+YWD G T
Sbjct: 325 DDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQG 382
Query: 327 IPYVVKLNPDDDKQNILLA-GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
Y V + D ++ A G D+ W + + Y HL V+ + F ++
Sbjct: 383 HAYPV-WDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 386 VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445
T S DK++R+W ++ + H + S++ PN +LA+ D ++ ++
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488
L K+ R GH + FSPD + S + WD
Sbjct: 501 -TLYKELR--GH--TDNITSLTFSPDSGLIASASMDNSVRVWD 538
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 193 (73.0 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 59/252 (23%), Positives = 109/252 (43%)
Query: 288 RDISFCN--DGTKFL-TASYDKNIKYWDTETGQVIRTF-----STGKIPYVVKLNPDDDK 339
R IS+C+ +K L TA + K W ++ T + G I + K D+
Sbjct: 231 RPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQ 290
Query: 340 QNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+++ LA + D + W +++ E + + H V +T+ S R T+ D+S R+W+
Sbjct: 291 KDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWD 350
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I + E H + I+ H + + LD ++ R + GH+
Sbjct: 351 LEAQEEILH-QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI---MFLEGHL 406
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518
Y +NFSP+G + +G G+ C WD + + T+ H+ + G ++ P+ + +
Sbjct: 407 KEIYG--INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFL 464
Query: 519 ATCGWDGLIKYW 530
T +D K W
Sbjct: 465 LTGAYDNTAKIW 476
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 55/249 (22%), Positives = 95/249 (38%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
H K+ +S + + D ++K W ++ + + G V ++ +
Sbjct: 281 HPKST--VSLDQKDVNLASCAADGSVKLWSLDSDEPVADIE-GHTVRVARVTWHPSGR-F 336
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
L D+ WD+ +E + H V I F T D RVW+
Sbjct: 337 LGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTG 396
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462
I ++ E H+ + I+ PN +A S DN ++ R+R + ++V G
Sbjct: 397 RCIMFL-EGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ-NLVTG- 453
Query: 463 ACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
V F P G F+++G + W +TL HEG +G + + +ATC
Sbjct: 454 ---VKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISS-DGQLIATC 509
Query: 522 GWDGLIKYW 530
+D K W
Sbjct: 510 SYDRTFKLW 518
Score = 119 (46.9 bits), Expect = 0.00060, P = 0.00060
Identities = 51/208 (24%), Positives = 83/208 (39%)
Query: 282 GHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQ 340
GH+ V +++ G +FL T YD++ + WD E + I G V + D
Sbjct: 320 GHTVRVARVTWHPSG-RFLGTTCYDRSWRLWDLEAQEEI-LHQEGHSMGVYDIAFHQDGS 377
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
G+ V WD+ T + HL + I F + T S D + +VW+
Sbjct: 378 LAGTGGLDAFGRV-WDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 436
Query: 401 IPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459
+ Y H + + + P + N+L + DN I+ T + + K AGH
Sbjct: 437 QRRCV-YTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW-THPGW--SPLKTLAGH-- 490
Query: 460 AGYACQVNFSPDGRFVM--SGDGEGKCW 485
G ++ S DG+ + S D K W
Sbjct: 491 EGKVMGLDISSDGQLIATCSYDRTFKLW 518
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 195 (73.7 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 56/223 (25%), Positives = 98/223 (43%)
Query: 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLN 334
C+ + GH+ AV I F + + + S +++ WD E +++RT K + +
Sbjct: 55 CIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFH 114
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
P + L +G D I WD+ K Y H AV + F + ++SDD ++
Sbjct: 115 PMGE---YLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTV 171
Query: 395 RVWEFGIPVVIKYISE--PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++W+ + K I+E H ++ + HPN LA+ S D + ++ E+F +
Sbjct: 172 KLWDL---IAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL-EKFNMIGSS 227
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF 495
G G V F+PDG + SG E + W+ + F
Sbjct: 228 E--GE--TGVVRSVLFNPDGSCLYSGS-ENTLRVYGWEPDRCF 265
Score = 186 (70.5 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 51/190 (26%), Positives = 85/190 (44%)
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
+L G D ++ W ++ H AV I F S R V S SLR+W+
Sbjct: 35 LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEA 94
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+++ + H S+ S+ HP +LA+ S+D+ I ++ R + + R+ GH A
Sbjct: 95 AKILRTLMG-HKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVF---RYKGHTQA- 149
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
C + FSPDG+++ S + WD + K+ H ++HP E +A+
Sbjct: 150 VRC-LAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYL-LASG 207
Query: 522 GWDGLIKYWD 531
D +K WD
Sbjct: 208 SADRTVKLWD 217
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 45/168 (26%), Positives = 77/168 (45%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKL 333
K +RT MGH ++ + F G + S D NIK WD G V R + +
Sbjct: 96 KILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAF 155
Query: 334 NPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
+PD LA SD V+ WD+ ++ E+ H AVN + F + + S D+
Sbjct: 156 SPDGK----WLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADR 211
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
++++W+ +I SE + S+ +P+ + L + S +N + +Y
Sbjct: 212 TVKLWDLEKFNMIGS-SEGETGVVRSVLFNPDGSCLYSGS-ENTLRVY 257
Score = 120 (47.3 bits), Expect = 0.00070, P = 0.00070
Identities = 44/240 (18%), Positives = 96/240 (40%)
Query: 277 MRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKL 333
++ + HS V + + L T D + W I + TG V ++
Sbjct: 13 LQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSL-TGHTSAVGCIQF 71
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
N +++ ++AG + WD+ +I + H +++++ F + S D +
Sbjct: 72 NSSEER---VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSN 128
Query: 394 LRVWEFGIP-VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
+++W+ V +Y + H ++ ++ P+ WLA+ S D+ + ++ + +
Sbjct: 129 IKLWDVRRKGCVFRY--KGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITE-- 184
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
F H A Q F P+ + SG + WD + + + + GV ++P
Sbjct: 185 -FTSHTSAVNVVQ--FHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNP 241
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 193 (73.0 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 62/259 (23%), Positives = 106/259 (40%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN---P 335
T H V +S+ D TK LT + +K WD +TG + TF + V P
Sbjct: 264 TLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFP 323
Query: 336 DDDKQNILLAGMSDKK--IVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D + L+ G SD + IV WD + EI + V + +T DK
Sbjct: 324 DSTR---LVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKE 380
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR 453
+R+ V + ISE + S+S+ + + +I ++ ++ + +
Sbjct: 381 IRILNLETKVE-RVISEEQ--PITSLSISGDGKFFIVNLSCQEIHLWDLAGEWK--QPLK 435
Query: 454 FAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWH 511
F+GH + Y + F D F+ SG + + + W+ K+ K L H + + C W+
Sbjct: 436 FSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHS-MTVNCVSWN 494
Query: 512 PLEQSKVATCGWDGLIKYW 530
P +A+ D I+ W
Sbjct: 495 PKNPRMLASASDDQTIRIW 513
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 192 (72.6 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 59/256 (23%), Positives = 107/256 (41%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 336
R + GH A+ + F +G + T S+D + W + R + V+ +P
Sbjct: 12 RYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSP- 70
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
N+L + D+ I W + + + E+ H V ++ F + ++S+DKS++V
Sbjct: 71 --LGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKV 128
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W + Y H H + P+ + + S D I I+ T + +N F G
Sbjct: 129 WNMYRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG 187
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQ 515
+A V F+P+G + S + WD + K+ + + H G + C +HP
Sbjct: 188 -----FANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG-VNCVSFHP-SG 240
Query: 516 SKVATCGWDGLIKYWD 531
+ + T DG +K D
Sbjct: 241 NYLITASSDGTLKILD 256
Score = 181 (68.8 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 49/211 (23%), Positives = 93/211 (44%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPD 336
+ H+ VR + F DG +AS DK+IK W+ + + +S + + V K +PD
Sbjct: 98 FKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFL--YSLYRHTHWVRCAKFSPD 155
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++++ DK I WD K+ + +G N + F + ++ D ++++
Sbjct: 156 G---RLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKI 212
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W+ + ++++ + H + +S HP+ N+L S D + I E + + G
Sbjct: 213 WDIRVNKLLQHY-QVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ---G 268
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
H G V+FS G SG + + W
Sbjct: 269 H--TGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 175 (66.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 50/171 (29%), Positives = 79/171 (46%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQ 340
H+ VR F DG ++ S DK IK WDT Q + FS G +V NP+
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVA-FNPNGTC- 200
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
I AG SD + WD+ ++ Q Y H G VN ++F S +T+S D +L++ +
Sbjct: 201 -IASAG-SDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDL- 257
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
+ + Y + H + ++S + D Q+L++ T +LN K
Sbjct: 258 LEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFD-ELNYK 307
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 51/224 (22%), Positives = 93/224 (41%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDK 339
Y+GH + + F G +AS D+ I+ W + F P V ++ D
Sbjct: 56 YVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAP-VRSVDFSADG 114
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
Q L + DK I W+M + +H V F R V+ S+DK++++W+
Sbjct: 115 Q-FLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459
+ S+ + ++ +PN +A+ D+ + I+ R L + +G
Sbjct: 174 TNKQCVNNFSD-FVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSG--- 229
Query: 460 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
G C V+F P G ++++ +G D ++ TL+ H G
Sbjct: 230 -GVNC-VSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 271
>FB|FBgn0038597 [details] [associations]
symbol:CG8064 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD EMBL:AY047497
RefSeq:NP_650705.1 UniGene:Dm.4684 SMR:Q9VE98 MINT:MINT-1586038
STRING:Q9VE98 EnsemblMetazoa:FBtr0083574 GeneID:42196
KEGG:dme:Dmel_CG8064 UCSC:CG8064-RA FlyBase:FBgn0038597
InParanoid:Q9VE98 OrthoDB:EOG4KWH7Q ChiTaRS:CG8064 GenomeRNAi:42196
NextBio:827621 Uniprot:Q9VE98
Length = 922
Score = 196 (74.1 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 66/268 (24%), Positives = 119/268 (44%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T +GH VR + F ND + + ++ K+WD + Q +RT T I K P D
Sbjct: 398 TRLGHQSEVRSVCFSNDSLA-IGSGAGESFKFWDRDAMQCLRTVPTDYI-LCSKFVPGD- 454
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+L GM K++ D+ +I +E H G + +I + + VT S D ++++W
Sbjct: 455 --RYVLLGMKSGKLLIVDVAAADIVEEIPAHEGELWSIAILPDQKGCVTGSGDTTVKIWT 512
Query: 399 FGI------PVVIKYISEPHMHSMP------SISLHPNTNWLAAQSLDNQILIYSTRE-R 445
F + K +S H +++ +++ P+ +LA LD + ++ +
Sbjct: 513 FELIDAGEGAAQTKVLSLLHKNTLKLEETVLCLAVSPDMKYLAVGLLDATVKVFFLDTFK 572
Query: 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG--DGEGKCWFWDWKSCKVFRTLKCHEG 503
F L+ GH + C ++ S D +++G D K W ++ C R++ H+
Sbjct: 573 FYLS----LYGHKLP-VIC-LDISYDSNLIVTGSADRNVKVWGLNFGDCH--RSIFAHDD 624
Query: 504 VCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+ ++ P TCG DG +K WD
Sbjct: 625 SVMSVQFIP-RTHMFFTCGKDGKVKQWD 651
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 194 (73.4 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 65/239 (27%), Positives = 108/239 (45%)
Query: 295 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 354
D K ++ D IK WD + R S G V+ L D+ ++++G SD +
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILS-GHTGSVLCLQYDN---RVIISGSSDATVRV 286
Query: 355 WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP--VVIKYISEPH 412
WD+ T E + H AV + F +N VT S D+S+ VW+ P + I+ + H
Sbjct: 287 WDVETGECIKTLIHHCEAVLHLRF--ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGH 344
Query: 413 MHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG 472
++ + + ++ + S D I ++S L + AGH G AC + + G
Sbjct: 345 RAAVNVVDF--DDRYIVSASGDRTIKVWSMDT---LEFVRTLAGHR-RGIAC-LQYR--G 395
Query: 473 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
R V+SG + WD S R L+ HE + + C ++ ++ + +DG IK WD
Sbjct: 396 RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEEL-VRCI--RFDEKRIVSGAYDGKIKVWD 451
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 58/233 (24%), Positives = 100/233 (42%)
Query: 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNP 335
C R GH+ +V + + D ++ S D ++ WD ETG+ I+T V+ L
Sbjct: 254 CSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTL-IHHCEAVLHLR- 309
Query: 336 DDDKQNILLAGMSDKKIVQWDM-NTKEIT--QEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
I++ D+ I WDM + ++IT + H AVN + F D R V++S D+
Sbjct: 310 --FANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDD--RYIVSASGDR 365
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
+++VW ++++ H L + + S DN I ++ L +
Sbjct: 366 TIKVWSMD---TLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCL---R 419
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 505
GH C + F D + ++SG +GK WD ++ R L +C
Sbjct: 420 VLEGHEEL-VRC-IRF--DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLC 468
Score = 129 (50.5 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 35/139 (25%), Positives = 66/139 (47%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G+C++T + H +AV + F N G +T S D++I WD + + I T + + +
Sbjct: 292 GECIKTLIHHCEAVLHLRFAN-GI-MVTCSKDRSIAVWDMVSPRDI-TIRRVLVGHRAAV 348
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
N D +++ D+ I W M+T E + H + + + R V+ S D +
Sbjct: 349 NVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNT 406
Query: 394 LRVWEFGIPVVIKYISEPH 412
+R+W+ V ++ + E H
Sbjct: 407 IRLWDIHSGVCLRVL-EGH 424
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 194 (73.4 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 65/239 (27%), Positives = 108/239 (45%)
Query: 295 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 354
D K ++ D IK WD + R S G V+ L D+ ++++G SD +
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILS-GHTGSVLCLQYDN---RVIISGSSDATVRV 286
Query: 355 WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP--VVIKYISEPH 412
WD+ T E + H AV + F +N VT S D+S+ VW+ P + I+ + H
Sbjct: 287 WDVETGECIKTLIHHCEAVLHLRF--ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGH 344
Query: 413 MHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG 472
++ + + ++ + S D I ++S L + AGH G AC + + G
Sbjct: 345 RAAVNVVDF--DDRYIVSASGDRTIKVWSMDT---LEFVRTLAGHR-RGIAC-LQYR--G 395
Query: 473 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
R V+SG + WD S R L+ HE + + C ++ ++ + +DG IK WD
Sbjct: 396 RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEEL-VRCI--RFDEKRIVSGAYDGKIKVWD 451
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 58/233 (24%), Positives = 100/233 (42%)
Query: 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNP 335
C R GH+ +V + + D ++ S D ++ WD ETG+ I+T V+ L
Sbjct: 254 CSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTL-IHHCEAVLHLR- 309
Query: 336 DDDKQNILLAGMSDKKIVQWDM-NTKEIT--QEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
I++ D+ I WDM + ++IT + H AVN + F D R V++S D+
Sbjct: 310 --FANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDD--RYIVSASGDR 365
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
+++VW ++++ H L + + S DN I ++ L +
Sbjct: 366 TIKVWSMD---TLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCL---R 419
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 505
GH C + F D + ++SG +GK WD ++ R L +C
Sbjct: 420 VLEGHEEL-VRC-IRF--DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLC 468
Score = 129 (50.5 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 35/139 (25%), Positives = 66/139 (47%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G+C++T + H +AV + F N G +T S D++I WD + + I T + + +
Sbjct: 292 GECIKTLIHHCEAVLHLRFAN-GI-MVTCSKDRSIAVWDMVSPRDI-TIRRVLVGHRAAV 348
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
N D +++ D+ I W M+T E + H + + + R V+ S D +
Sbjct: 349 NVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNT 406
Query: 394 LRVWEFGIPVVIKYISEPH 412
+R+W+ V ++ + E H
Sbjct: 407 IRLWDIHSGVCLRVL-EGH 424
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 194 (73.4 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 46/167 (27%), Positives = 83/167 (49%)
Query: 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKL 333
C+ TY GH V D+ F G F++ SYDK + W T++ Q +R F G + V V+
Sbjct: 484 CVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVF-VGHLSDVDCVQF 542
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+P+ N + G SD+ + WD T + + H G+V+++ F R + S D +
Sbjct: 543 HPNS---NYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHN 599
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
+ +W+ ++ + H ++ +I+ + LAA LDN + ++
Sbjct: 600 IIIWDLSNGSLVTTLLR-HTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
Score = 178 (67.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 56/231 (24%), Positives = 96/231 (41%)
Query: 303 SYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK 360
S D N++ D +G+V R+ TG + Y P+ N+LL+ D I W + T
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPV-YRCAFAPE---MNLLLSCSEDSTIRLWSLLTW 482
Query: 361 EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS 420
Y H+ V + F FV+ S DK+ R+W ++ + H+ + +
Sbjct: 483 SCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALR-VFVGHLSDVDCVQ 541
Query: 421 LHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 480
HPN+N++A S D + ++ + + GH G + FS GR++ SG
Sbjct: 542 FHPNSNYVATGSSDRTVRLW---DNMTGQSVRLMTGH--KGSVSSLAFSACGRYLASGSV 596
Query: 481 EGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+ WD + + TL H + + + +A G D + WD
Sbjct: 597 DHNIIIWDLSNGSLVTTLLRHTSTVTTITFSR-DGTVLAAAGLDNNLTLWD 646
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 43/157 (27%), Positives = 68/157 (43%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY 329
+T + +R ++GH V + F + T S D+ ++ WD TGQ +R TG
Sbjct: 520 ATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLM-TGHKGS 578
Query: 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
V L L +G D I+ WD++ + +H V TITF +
Sbjct: 579 VSSL-AFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAG 637
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN 426
D +L +W+F V YIS H+ ++S H + N
Sbjct: 638 LDNNLTLWDFH-KVTEDYISN-HI----TVSHHQDEN 668
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 193 (73.0 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 63/249 (25%), Positives = 106/249 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 331
G+ T +G S+++ +SF + L S D + + W+TE G+ T + GK+ Y
Sbjct: 356 GQQKSTLLGASQSIVSVSFSPNDESILGTSNDNSARLWNTELGRSRHTLTGHIGKV-YTG 414
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
K N ++ G D+ I WD+ T+ + + S + D
Sbjct: 415 KFI----NSNRVVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVD 470
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTR--ERFQL 448
S+R W+ + +S H + SI+ P NTN + S D+ + I R + +
Sbjct: 471 HSVRFWDSNAGEPTQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIRT 530
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL-KCHEG---V 504
K + + + + ++SPDGR++ SG +G WD + K + L K H V
Sbjct: 531 FKDPEYRNGL--NWT-KASWSPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSV 587
Query: 505 CIGCEWHPL 513
C C W PL
Sbjct: 588 CC-CSWSPL 595
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKL 333
K + + GH+ + ++F + G T DK +K WD +GQ T V V
Sbjct: 315 KAKKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSF 374
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+P+D+ +L +D W+ H+G V T F++SNR VT S D++
Sbjct: 375 SPNDES---ILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINSNR-VVTGSHDRT 430
Query: 394 LRVWE 398
+++W+
Sbjct: 431 IKLWD 435
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 191 (72.3 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 64/250 (25%), Positives = 110/250 (44%)
Query: 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 343
SK V + + D K ++ D IK WD T + R TG V+ L D+ ++
Sbjct: 204 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRIL-TGHTGSVLCLQYDE---RVI 257
Query: 344 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP- 402
+ G SD + WD+N E+ H AV + F +N VT S D+S+ VW+ P
Sbjct: 258 ITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPT 315
Query: 403 -VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+ ++ + H ++ + + ++ + S D I +++T + GH G
Sbjct: 316 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST---CEFVRTLNGH-KRG 369
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 370 IAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVSG 423
Query: 522 GWDGLIKYWD 531
+DG IK WD
Sbjct: 424 AYDGKIKVWD 433
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R +GH AV + F D ++AS D+ IK W+T T + +RT + G + L D
Sbjct: 321 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYRD 377
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++++G SD I WD+ + + H V I F N+R V+ + D ++VW
Sbjct: 378 ---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 432
Query: 398 E 398
+
Sbjct: 433 D 433
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 198 (74.8 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 48/189 (25%), Positives = 88/189 (46%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+ D + WD+ + T Y H V + + F T+S D++ R+W F
Sbjct: 369 LLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFART 428
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462
++ + H+ + + HPN+N++A S D + ++STR+ + + F GH G
Sbjct: 429 YPLRLYAG-HLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASV---RLFTGH--RGP 482
Query: 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 522
+ FSP+G+++ S + + WD S +F+ L+ H + + S VA+
Sbjct: 483 VLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQ-DSSLVASAS 541
Query: 523 WDGLIKYWD 531
D ++ WD
Sbjct: 542 MDNTVRVWD 550
Score = 159 (61.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 39/166 (23%), Positives = 79/166 (47%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
Y GH+ V D+ F TAS+D+ + W +R ++ G + V VK +P+
Sbjct: 392 YRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYA-GHLSDVDCVKFHPNS 450
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
N + G +DK + W + + H G V T+ F + + ++ +D+ L++W
Sbjct: 451 ---NYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLW 507
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
+ + K + H ++ S+S +++ +A+ S+DN + ++ R
Sbjct: 508 DLASGGLFKDL-RGHTDTISSLSFSQDSSLVASASMDNTVRVWDIR 552
Score = 136 (52.9 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 50/223 (22%), Positives = 91/223 (40%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
D G ++T GHS V +F D + L+ S D ++YWD ++ +
Sbjct: 338 DDEDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAY 397
Query: 328 P-YVVKLNPDDDKQNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
P + V ++P ++ + S D+ W + Y HL V+ + F ++
Sbjct: 398 PVWDVDVSPC----SLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYI 453
Query: 386 VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445
T S DK++R+W ++ + H + +++ PN +LA+ D ++ ++
Sbjct: 454 ATGSTDKTVRLWSTRQGASVRLFTG-HRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASG 512
Query: 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488
L K R GH ++FS D V S + WD
Sbjct: 513 -GLFKDLR--GH--TDTISSLSFSQDSSLVASASMDNTVRVWD 550
Score = 37 (18.1 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 207 AEFNNPATDTWLMKNRK 223
A F+N A W ++ RK
Sbjct: 297 AGFDNSAVKLWSLRARK 313
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 188 (71.2 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 57/257 (22%), Positives = 106/257 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
GKC T+ GH+ + +SF T T S D K WD + G+ + T G ++ L
Sbjct: 167 GKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLR-GHSAEIISL 225
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+ + I+ G D +V WD +T H +++ +F +T S DK+
Sbjct: 226 SFNTSGDRII-TGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKT 284
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR 453
++W+ + ++ H + +A S D I+S R + K +
Sbjct: 285 CKLWDATNGKCVATLTG-HDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLE- 342
Query: 454 FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPL 513
GH G +++F+P G +++G + WD ++ + + L+ H C ++
Sbjct: 343 --GH--EGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN-Y 397
Query: 514 EQSKVATCGWDGLIKYW 530
+ + V T D + W
Sbjct: 398 KGNIVITGSKDNTCRIW 414
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 50/234 (21%), Positives = 99/234 (42%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPY 329
TF+ + H + +++ G+ F+T SYD+ K WDT +G+ + T + + Y
Sbjct: 81 TFY--LFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVY 138
Query: 330 VVKLN-PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
+ N P DK + G DK W + T + + H + ++F + T
Sbjct: 139 AIAFNNPYGDK---IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATG 195
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
S D + ++W+ + Y H + S+S + + + + S D+ ++++ ++
Sbjct: 196 SMDTTAKLWDIQNGEEV-YTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKV 254
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE 502
N GH +F+ D +++G + C WD + K TL H+
Sbjct: 255 NI---LIGHCAE--ISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHD 303
Score = 163 (62.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 50/215 (23%), Positives = 88/215 (40%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
+G+ + T GHS + +SF G + +T S+D + WD +TG+ + G +
Sbjct: 208 NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNIL-IGHCAEISS 266
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
+ + D +++L G DK WD + H + F + + T+S D
Sbjct: 267 ASFNWDC-SLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
+ R++ I + E H + IS +P N L S D I+ + L +
Sbjct: 326 TARIFSAATRKCIAKL-EGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLE 384
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
GH ++C N+ G V++G + C W
Sbjct: 385 ---GHTDEIFSCAFNYK--GNIVITGSKDNTCRIW 414
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 191 (72.3 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 64/250 (25%), Positives = 110/250 (44%)
Query: 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 343
SK V + + D K ++ D IK WD T + R TG V+ L D+ ++
Sbjct: 303 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRIL-TGHTGSVLCLQYDE---RVI 356
Query: 344 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP- 402
+ G SD + WD+N E+ H AV + F +N VT S D+S+ VW+ P
Sbjct: 357 ITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPT 414
Query: 403 -VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+ ++ + H ++ + + ++ + S D I +++T + GH G
Sbjct: 415 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST---CEFVRTLNGH-KRG 468
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 469 IAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVSG 522
Query: 522 GWDGLIKYWD 531
+DG IK WD
Sbjct: 523 AYDGKIKVWD 532
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R +GH AV + F D ++AS D+ IK W+T T + +RT + G + L D
Sbjct: 420 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYRD 476
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++++G SD I WD+ + + H V I F N+R V+ + D ++VW
Sbjct: 477 ---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 531
Query: 398 E 398
+
Sbjct: 532 D 532
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 191 (72.3 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 64/250 (25%), Positives = 110/250 (44%)
Query: 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 343
SK V + + D K ++ D IK WD T + R TG V+ L D+ ++
Sbjct: 303 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRIL-TGHTGSVLCLQYDE---RVI 356
Query: 344 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP- 402
+ G SD + WD+N E+ H AV + F +N VT S D+S+ VW+ P
Sbjct: 357 ITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPT 414
Query: 403 -VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+ ++ + H ++ + + ++ + S D I +++T + GH G
Sbjct: 415 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST---CEFVRTLNGH-KRG 468
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 469 IAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVSG 522
Query: 522 GWDGLIKYWD 531
+DG IK WD
Sbjct: 523 AYDGKIKVWD 532
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R +GH AV + F D ++AS D+ IK W+T T + +RT + G + L D
Sbjct: 420 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYRD 476
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++++G SD I WD+ + + H V I F N+R V+ + D ++VW
Sbjct: 477 ---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 531
Query: 398 E 398
+
Sbjct: 532 D 532
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 191 (72.3 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 64/250 (25%), Positives = 110/250 (44%)
Query: 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 343
SK V + + D K ++ D IK WD T + R TG V+ L D+ ++
Sbjct: 303 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRIL-TGHTGSVLCLQYDE---RVI 356
Query: 344 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP- 402
+ G SD + WD+N E+ H AV + F +N VT S D+S+ VW+ P
Sbjct: 357 ITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPT 414
Query: 403 -VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+ ++ + H ++ + + ++ + S D I +++T + GH G
Sbjct: 415 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST---CEFVRTLNGH-KRG 468
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 469 IAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVSG 522
Query: 522 GWDGLIKYWD 531
+DG IK WD
Sbjct: 523 AYDGKIKVWD 532
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R +GH AV + F D ++AS D+ IK W+T T + +RT + G + L D
Sbjct: 420 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYRD 476
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++++G SD I WD+ + + H V I F N+R V+ + D ++VW
Sbjct: 477 ---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 531
Query: 398 E 398
+
Sbjct: 532 D 532
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 190 (71.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 61/257 (23%), Positives = 109/257 (42%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPD-- 336
+G ++ V +F D + LT+S+ K W ++ +T G YV V L P
Sbjct: 258 VGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLR-GHASYVGGVALRPGVK 316
Query: 337 DDKQNI--LLAGMSDKKIVQWDMNTKEITQEYDQHLG-AVNTITFVDSNRRFVTSSDDKS 393
D++N+ + +G D + W N +E + H+ V+ + F S R T+ D S
Sbjct: 317 ADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSS 376
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR 453
R+W+ + + E H + +S H + + L LD ++ R +
Sbjct: 377 WRLWDLEQKTEVLH-QEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCI---MF 432
Query: 454 FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPL 513
GH+ A + V+FSP+G + +G + C WD + + T+ H + ++
Sbjct: 433 LEGHLGAVFG--VDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQE 490
Query: 514 EQSKVATCGWDGLIKYW 530
S + TC +D K W
Sbjct: 491 CGSFLVTCSYDSTTKIW 507
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 38/161 (23%), Positives = 73/161 (45%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 341
GH+K V +S+ +DG+ +T D + WD TG+ I F G + V ++ + +
Sbjct: 393 GHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIM-FLEGHLGAVFGVDFSPNGFH 451
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF-VTSSDDKSLRVWEFG 400
I G D WD+ ++ H ++ + + F VT S D + ++W
Sbjct: 452 IA-TGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNK 510
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 441
+K + + H + + S+ + PN+ ++A S D ++S
Sbjct: 511 TWQPLKTL-QGHDNKVISVDIAPNSQYIATTSFDRTFKLWS 550
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 60/267 (22%), Positives = 100/267 (37%)
Query: 267 EDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTAS--YDKNIKYWDTETGQVIRTFST 324
E K T G +Y+G A+R ++ AS +D +K W + I T
Sbjct: 294 ELKQTLRGHA--SYVG-GVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADI-T 349
Query: 325 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
G +P+ V L D WD+ K + H V+ +++
Sbjct: 350 GHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSV 409
Query: 385 FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
VT D RVW+ I ++ E H+ ++ + PN +A S DN I+ R
Sbjct: 410 LVTGGLDAFGRVWDLRTGRCIMFL-EGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRR 468
Query: 445 RFQLNKKKRFAGHIVAGYACQVNFSPD-GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
R + H V + + G F+++ + W K+ + +TL+ H+
Sbjct: 469 RQPVYT---IPAH--TNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDN 523
Query: 504 VCIGCEWHPLEQSKVATCGWDGLIKYW 530
I + P Q +AT +D K W
Sbjct: 524 KVISVDIAPNSQY-IATTSFDRTFKLW 549
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 157 (60.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 47/157 (29%), Positives = 73/157 (46%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 341
GH + + F + ++AS D IK WD E+G+ RT G V + D DK
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLK-GHTNAVQDI--DFDKTG 160
Query: 342 ILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
LLA S D I WD T + + H V+ + F S + ++SS DK+++VWE
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA 220
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQI 437
IK + H + I++ + + +A+ S D I
Sbjct: 221 TGYCIKTLVG-HEDWVRKITVSEDGSCIASCSNDQTI 256
Score = 134 (52.2 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 37/126 (29%), Positives = 57/126 (45%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G+ RT GH+ AV+DI F G + S D IK WD +T ++T G V V
Sbjct: 138 GEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLH-GHDHNVSCV 196
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+ P D+ L++ DK I W+ T + H V IT + + S+D
Sbjct: 197 RFTPSGDQ---LISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSND 253
Query: 392 KSLRVW 397
++++ W
Sbjct: 254 QTIKTW 259
Score = 130 (50.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNP 335
C++T GH V + F G + +++S DK IK W+ TG I+T G +V K+
Sbjct: 182 CVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTL-VGHEDWVRKITV 240
Query: 336 DDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN 382
+D I +D+ I W++ E Y +H V + F +N
Sbjct: 241 SEDGSCIASCS-NDQTIKTWNIVKGECLATYREHSHVVECLAFSTAN 286
Score = 75 (31.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 30/114 (26%), Positives = 44/114 (38%)
Query: 417 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 476
P +L +LA S D I I+ L + GH + V F P G+F++
Sbjct: 308 PGGNLVGQCGYLATGSRDKTIKIWELATGRCL---ATYIGH--DNWVRAVRFHPCGKFLL 362
Query: 477 SGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530
S + WD + +T+ I C L +AT G D +IK W
Sbjct: 363 SVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 191 (72.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 67/254 (26%), Positives = 116/254 (45%)
Query: 287 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAG 346
VR I+F DG +T + D+ IK WD T +V FS G + L+ + + +++G
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFS-GHEQDIYSLDFSHNGR-FIVSG 420
Query: 347 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVT-SSDDKSLRVWEFGIPVVI 405
D+ WD+ T + + + G T + N +F+ S D+ +RVW +V
Sbjct: 421 SGDRTARLWDVETGQCILKLEIENGV--TAIAISPNDQFIAVGSLDQIIRVWSVSGTLVE 478
Query: 406 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY---STRE-RFQLNK-----KKRFAG 456
+ E H S+ SI+ P+++ L + SLD I ++ +TR K K + G
Sbjct: 479 RL--EGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTG 536
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS 516
H + V SPD R+ +SG + FWD ++ + + T + H+ I + P +
Sbjct: 537 H--TDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSP-DGR 593
Query: 517 KVATCGWDGLIKYW 530
+ A+ D + W
Sbjct: 594 QFASGSGDLRARIW 607
Score = 182 (69.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 60/247 (24%), Positives = 116/247 (46%)
Query: 269 KSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKI 327
K F+ + T + H V + F N+G K+L ++ +D +TG+ + T
Sbjct: 299 KRVFNINLVHT-LEHPSVVCCVKFSNNG-KYLATGCNQAANVFDVQTGKKLFTLHEESPD 356
Query: 328 P----YV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS 381
P YV + +PD L+ G D++I WD++T+++ + H + ++ F +
Sbjct: 357 PSRDLYVRTIAFSPDG---KYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHN 413
Query: 382 NRRFVTSSDDKSLRVWEFGI-PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
R V+ S D++ R+W+ ++K E + + +I++ PN ++A SLD I ++
Sbjct: 414 GRFIVSGSGDRTARLWDVETGQCILKLEIE---NGVTAIAISPNDQFIAVGSLDQIIRVW 470
Query: 441 STRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV--FRTL 498
S +R GH + Y+ + FSPD ++SG + W+ ++ + +
Sbjct: 471 SVSGTLV----ERLEGHKESVYS--IAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAI 524
Query: 499 KCHEGVC 505
K EG+C
Sbjct: 525 K-PEGIC 530
Score = 123 (48.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 33/135 (24%), Positives = 59/135 (43%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ-----------VIRTF 322
G + GH ++V I+F D + L+ S DK IK W+ + + + +
Sbjct: 474 GTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKAT 533
Query: 323 STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN 382
TG +V+ + D + L+G D+ + WD+ T + H +V ++ F
Sbjct: 534 YTGHTDFVLSVAVSPDSR-WGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDG 592
Query: 383 RRFVTSSDDKSLRVW 397
R+F + S D R+W
Sbjct: 593 RQFASGSGDLRARIW 607
Score = 43 (20.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 129 VEDASIDSFVFDE---QYNTFYKYGYAADPAGNNY 160
VEDA+ + D +YN + +A+ GN+Y
Sbjct: 4 VEDATKVQEMLDALKAEYNALAHHSFASKARGNDY 38
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 53/211 (25%), Positives = 93/211 (44%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPD 336
+ H+ VR + F DG TAS DK+IK W + + +S + + V K +PD
Sbjct: 56 FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFL--YSLYRHTHWVRCAKFSPD 113
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++++ DK I WD K+ + +G N + F S ++ D++++V
Sbjct: 114 G---RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKV 170
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456
W+ + ++++ + H + IS HP+ N+L S D + I E + + G
Sbjct: 171 WDVRVNKLLQHY-QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ---G 226
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
H G V+FS G SG + + W
Sbjct: 227 H--TGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 184 (69.8 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 49/174 (28%), Positives = 79/174 (45%)
Query: 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IP 328
S + + + + H+ VR F DG ++ S DK IK WDT Q + FS
Sbjct: 88 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 147
Query: 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
V NP I AG SD+ + WD+ ++ Q Y H G VN I+F S +T+
Sbjct: 148 NFVDFNPSGTC--IASAG-SDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITA 204
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
S D +L++ + + + Y + H + ++S A+ D Q+L++ T
Sbjct: 205 SSDGTLKILDL-LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 257
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 50/231 (21%), Positives = 92/231 (39%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
H + R Y+GH V + F G +AS D+ ++ W + F P V
Sbjct: 8 HARAYR-YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAP-VRS 65
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
++ D Q L DK I W M + +H V F R V+ S+DK
Sbjct: 66 VDFSADGQ-FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 124
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++++W+ + S+ + + +P+ +A+ D + ++ R L +
Sbjct: 125 TIKIWDTTNKQCVNNFSDS-VGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 183
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
+G G C ++F P G ++++ +G D ++ TL+ H G
Sbjct: 184 VHSG----GVNC-ISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 229
Score = 154 (59.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 46/192 (23%), Positives = 84/192 (43%)
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
N+L + D+ + W + + E+ H V ++ F + T+S+DKS++VW
Sbjct: 31 NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMY 90
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ Y H H + P+ + + S D I I+ T + +N F+ +
Sbjct: 91 RQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN---FSDSV-- 144
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQSKVA 519
G+A V+F+P G + S + WD + K+ + + H G + C +HP + +
Sbjct: 145 GFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG-VNCISFHP-SGNYLI 202
Query: 520 TCGWDGLIKYWD 531
T DG +K D
Sbjct: 203 TASSDGTLKILD 214
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 47/180 (26%), Positives = 75/180 (41%)
Query: 355 WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 414
W+ Y H V ++ F ++S D+++R+W IP SE H
Sbjct: 3 WNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLW---IPDKRGKFSEFKAH 59
Query: 415 SMP--SISLHPNTNWLAAQSLDNQILIYST-RERFQLNKKKRFAGHIVAGYACQVNFSPD 471
+ P S+ + +LA S D I ++S R+RF L R H V C FSPD
Sbjct: 60 TAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRF-LYSLYRHT-HWVR---C-AKFSPD 113
Query: 472 GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
GR ++S + WD + + G +++P + +A+ G D +K WD
Sbjct: 114 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNP-SGTCIASAGSDQTVKVWD 172
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 183 (69.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 56/223 (25%), Positives = 103/223 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G+ + ++GH V + + ++ S DK IK W T GQ + T G +V V
Sbjct: 97 GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW-TIKGQCLATL-LGHNDWVSQV 154
Query: 332 KLNP----DDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVT 387
++ P DDD I+ AG +DK + W++N +I ++ H +NT+T +
Sbjct: 155 RVVPNEKADDDSVTIISAG-NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIAS 213
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
+ D + +W + +S + S++ PN WLAA + I ++S ++
Sbjct: 214 AGKDGEIMLWNLAAKKAMYTLSA--QDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYL 270
Query: 448 LNK-KKRFAGHIVAG--YACQVNFSPDGRFVMSG--DGEGKCW 485
++ + FAG+ A +A + +S DG+ + +G D + W
Sbjct: 271 VDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVW 313
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 43/181 (23%), Positives = 89/181 (49%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
D F G +R++ GHS V+D + DG L+AS+DK ++ WD TG+ + F G
Sbjct: 50 DDQKF-GVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRF-VGHK 107
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFV------DS 381
V+ ++ D K +++++G DK I W + + + H V+ + V D
Sbjct: 108 SDVMSVDIDK-KASMIISGSRDKTIKVWTIKGQCLATLLG-HNDWVSQVRVVPNEKADDD 165
Query: 382 NRRFVTSSDDKSLRVWEFG-IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
+ +++ +DK ++ W + +I H ++ +++ P+ +A+ D +I+++
Sbjct: 166 SVTIISAGNDKMVKAWNLNQFQIEADFIG--HNSNINTLTASPDGTLIASAGKDGEIMLW 223
Query: 441 S 441
+
Sbjct: 224 N 224
>UNIPROTKB|Q5E959 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9913 "Bos taurus" [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849
EMBL:BT021061 EMBL:BC119959 IPI:IPI00698102 RefSeq:NP_001015567.1
UniGene:Bt.17089 ProteinModelPortal:Q5E959 STRING:Q5E959
PRIDE:Q5E959 Ensembl:ENSBTAT00000018840 GeneID:510201
KEGG:bta:510201 CTD:11171 HOGENOM:HOG000174258 HOVERGEN:HBG055228
InParanoid:Q5E959 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
NextBio:20869325 Uniprot:Q5E959
Length = 350
Score = 184 (69.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 65/258 (25%), Positives = 111/258 (43%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G + T++GH AV + D TK TA+ D K WD +G + T + I V
Sbjct: 49 GDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDF 108
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEIT-QEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
D N LL G DK + +D+N E +E H + + +++ + S+DDK
Sbjct: 109 TQDS---NYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSADDK 164
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++R+W+ +K ++ +M S+ S+ P L + I +S L+ K
Sbjct: 165 TVRLWDHATMTEVKSLNF-NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---VSLDPIK 218
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
F A + P+ FV++G + K + +D+ S + + K H G I C
Sbjct: 219 SFEAPATINSA---SLHPEKEFVVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFS 274
Query: 513 LEQSKVATCGWDGLIKYW 530
+ A+ DG ++ W
Sbjct: 275 PDGELYASGSEDGTLRLW 292
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 55/222 (24%), Positives = 91/222 (40%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDK 339
+ H V+ + F D LT DK ++ +D + +G + K L +DK
Sbjct: 97 LAHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDK 156
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
Q IL A DK + WD T + + ++ +V+++ ++ V + +S+ +
Sbjct: 157 Q-ILSA--DDKTVRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSI-AFHS 210
Query: 400 GIPV-VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ + IK P ++ S SLHP ++ A D ++ Y +L K GH
Sbjct: 211 AVSLDPIKSFEAPA--TINSASLHPEKEFVVAGGEDFKLYKYDYNSGEELESYK---GHF 265
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500
C V FSPDG SG +G W K + KC
Sbjct: 266 -GPIHC-VRFSPDGELYASGSEDGTLRLWQTVVGKTYGLWKC 305
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 55/225 (24%), Positives = 94/225 (41%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDK 339
+ GH + + + F DG + S D+ ++ WD E G + F+ V ++PD
Sbjct: 384 FAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDGVTTVAISPDT-- 441
Query: 340 QNILLAGMSDKKIVQWDMNTK---EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
+ AG DK + WD+ E + D H +V ++ F + R VT S DK++++
Sbjct: 442 -KYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKL 500
Query: 397 WEFGIPV------------VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
WE P +K E H + S++L P+ W+ + S D + + R
Sbjct: 501 WELATPRGNMQNQGSKGGRCVKTF-EGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRT 559
Query: 445 RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 489
+ + GH V SP G F +G G+ + W +
Sbjct: 560 G---STQLMLQGH--KNSVISVAPSPTGGFFATGSGDMRARIWSY 599
Score = 184 (69.8 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 64/231 (27%), Positives = 97/231 (41%)
Query: 287 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAG 346
+R + F DG T + DK I+ WD T + IR G + L+ D + I +G
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITT-RTIRIQFAGHEQDIYSLDFARDGRTIA-SG 406
Query: 347 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF--GIPVV 404
D+ + WD+ + G V T+ + S DKS+RVW+ G PV
Sbjct: 407 SGDRTVRLWDIENGTALTVFTIEDG-VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVE 465
Query: 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY---STRERFQ-LNKK-----KRFA 455
+ H S+ S++ PN L SLD I ++ + R Q K K F
Sbjct: 466 RLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFE 525
Query: 456 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
GH + V +PD ++VMSG + FWD ++ L+ H+ I
Sbjct: 526 GH--RDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVI 574
Score = 179 (68.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 51/216 (23%), Positives = 105/216 (48%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF------STGKIPYV--VKLN 334
H V + F DG K++ +++ + +D TG+ + +TG + Y+ V +
Sbjct: 298 HESVVCCVRFSADG-KYVATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDL-YIRSVCFS 355
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD L G DK+I WD+ T+ I ++ H + ++ F R + S D+++
Sbjct: 356 PDG---KYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTV 412
Query: 395 RVWEF--GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
R+W+ G + + I + + ++++ P+T ++AA SLD + ++ + + + +
Sbjct: 413 RLWDIENGTALTVFTIED----GVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLE 468
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488
GH + Y+ V FSP+GR +++G + W+
Sbjct: 469 GPDGHKDSVYS--VAFSPNGRDLVTGSLDKTIKLWE 502
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 182 (69.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 60/249 (24%), Positives = 113/249 (45%)
Query: 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 345
AVR + F DG LT DK +K W+ G ++RT+S G V+ D + L +
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAAGSFDNSS-LCS 84
Query: 346 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI--PV 403
G DK +V WD+ + ++ +++ H G VNT+ F + ++ S D S+R W+ P
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPE 144
Query: 404 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 463
++ + E + S+ + + + A S+D ++ R+ L + F+ ++ +
Sbjct: 145 PVQTLDEAR-DGISSVKVSDHE--VLAGSVDGRV------RRYDLRMGQLFSDYVGSPIT 195
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ-SKVATCG 522
C FS DG+ + + D + ++ H+ + E+ + V +C
Sbjct: 196 CTC-FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCS 254
Query: 523 WDGLIKYWD 531
DG + +WD
Sbjct: 255 EDGKVFFWD 263
Score = 163 (62.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 59/262 (22%), Positives = 107/262 (40%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 331
G +RTY GH V D + D + + DK + WD +GQV+R F GK+ V
Sbjct: 57 GTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVN-TV 115
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDSNRRFVTSS 389
+ N ++ ++L+G D + WD ++ E Q D+ ++++ S+ + S
Sbjct: 116 QFN---EEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKV--SDHEVLAGS 170
Query: 390 DDKSLRVWEFGIPVVIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
D +R ++ + + Y+ P + + SLD+ + + ++ +L
Sbjct: 171 VDGRVRRYDLRMGQLFSDYVGSP----ITCTCFSRDGQCTLVSSLDSTLRLLD-KDTGEL 225
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
+ + GH Y S V+S +GK +FWD + L V
Sbjct: 226 LGE--YTGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGVLVLALPVGPSVVQSL 283
Query: 509 EWHPLEQSKVATCGWDGLIKYW 530
+HP E + G G ++ W
Sbjct: 284 AYHPTEPCLLTAMG--GSVQCW 303
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 63/260 (24%), Positives = 116/260 (44%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
K M+T AVR + F DG LT DK +K W+ G ++RT+S G V+
Sbjct: 16 KRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAA 74
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
D + L +G DK +V WD+ T ++ +++ H G VNT+ F + ++ S D S+
Sbjct: 75 GSFDNSH-LCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSV 133
Query: 395 RVWEFGI--PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
R W+ P ++ + E + S+ + + + A S+D ++ R+ L +
Sbjct: 134 RCWDCRSRKPEPVQTLDEAR-DGISSVKVSDHE--ILAGSVDGRV------RRYDLRMGQ 184
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
+ ++ + C FS DG+ + + D + ++ H+ +
Sbjct: 185 VSSDYVGSPITCTC-FSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCL 243
Query: 513 LEQ-SKVATCGWDGLIKYWD 531
E+ + V +C DG + +WD
Sbjct: 244 SERDTHVVSCSEDGKVFFWD 263
Score = 180 (68.4 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 63/262 (24%), Positives = 108/262 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 331
G +RTY GH V D + D + + DK + WD TGQV+R F GK+ V
Sbjct: 57 GTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVN-TV 115
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDSNRRFVTSS 389
+ N ++ ++L+G D + WD ++ E Q D+ ++++ S+ + S
Sbjct: 116 QFN---EEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKV--SDHEILAGS 170
Query: 390 DDKSLRVWEFGIPVVIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
D +R ++ + V Y+ P + + SLD+ + + ++ +L
Sbjct: 171 VDGRVRRYDLRMGQVSSDYVGSP----ITCTCFSRDGQCTLISSLDSTLRLLD-KDTGEL 225
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
+ + GH Y S V+S +GK +FWD + L V
Sbjct: 226 LGE--YVGHKNQQYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSNVVQSL 283
Query: 509 EWHPLEQSKVATCGWDGLIKYW 530
+HP E + G G I+YW
Sbjct: 284 AYHPTEPCLLTAMG--GSIQYW 303
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 59/249 (23%), Positives = 114/249 (45%)
Query: 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 345
AVR + F DG LT DK +K W+ G ++RT+S G V+ D + L +
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAAGSFDNSS-LCS 84
Query: 346 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI--PV 403
G DK +V WD+ + ++ +++ H G VNT+ F + ++ S D ++R W+ P
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDCRSRKPE 144
Query: 404 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 463
++ + E + S+ + + + A S+D ++ R+ L + F+ ++ +
Sbjct: 145 PVQTLDEAR-DGISSVKVSDHE--VLAGSVDGRV------RRYDLRMGQLFSDYVGSPIT 195
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ-SKVATCG 522
C + FS DG+ + + D + ++ H+ + E+ + V +C
Sbjct: 196 C-ICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERDTHVVSCS 254
Query: 523 WDGLIKYWD 531
DG + +WD
Sbjct: 255 EDGKVFFWD 263
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 63/262 (24%), Positives = 109/262 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 331
G +RTY GH V D + D + + DK + WD +GQV+R F GK+ V
Sbjct: 57 GTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVN-TV 115
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDSNRRFVTSS 389
+ N ++ ++L+G D I WD ++ E Q D+ ++++ S+ + S
Sbjct: 116 QFN---EEATVILSGSIDSTIRCWDCRSRKPEPVQTLDEARDGISSVKV--SDHEVLAGS 170
Query: 390 DDKSLRVWEFGIPVVIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
D +R ++ + + Y+ P + I + SLD+ + + ++ +L
Sbjct: 171 VDGRVRRYDLRMGQLFSDYVGSP----ITCICFSRDGQCTLVSSLDSTLRLLD-KDTGEL 225
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
+ + GH Y S V+S +GK +FWD + L GV
Sbjct: 226 LGE--YTGHKNKEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGPGVVQSL 283
Query: 509 EWHPLEQSKVATCGWDGLIKYW 530
+HP E + G G I+ W
Sbjct: 284 TYHPTEPCLLTAMG--GSIQCW 303
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 186 (70.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 65/233 (27%), Positives = 103/233 (44%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
GK T GH VRD++ + + S DK +K WD E Q+IR + G + V V
Sbjct: 172 GKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYY-GHLSGVRTV 230
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
++P D I AG D I WDM T+ H G +N + + + V+SS D
Sbjct: 231 SIHPTLDL--IATAGR-DSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTD 287
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
++R+W+ +K ++ H S+ + +LHP +A+ D+ I + E L
Sbjct: 288 ATVRLWDVVAGKTMKVLTH-HKRSVRATALHPKEFSVASACTDD-IRSWGLAEGSLLTN- 344
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 504
F G ++ + D GD G F+D+KS +++L E V
Sbjct: 345 --FESE-KTGIINTLSINQDDVLFAGGDN-GVLSFYDYKSGHKYQSLATREMV 393
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 47/201 (23%), Positives = 87/201 (43%)
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
V ++P D++ + G +D + WD+ T ++ H+ V + D + + S+
Sbjct: 145 VAIDPVDNEW--FITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSE 202
Query: 391 DKSLRVWEFGIPVVIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
DK+++ W+ +I+ Y H+ + ++S+HP + +A D+ I ++ R R +
Sbjct: 203 DKTVKCWDLEKNQIIRDYYG--HLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVI 260
Query: 450 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCE 509
GH G QV +P V+S + WD + K + L H+
Sbjct: 261 T---LVGH--KGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATA 315
Query: 510 WHPLEQSKVATCGWDGLIKYW 530
HP E S + C D I+ W
Sbjct: 316 LHPKEFSVASACTDD--IRSW 334
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 275 KCMRTYMGHSKAVRDISFCN-DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
K R GH VR ++ D F+T S D +K WD TG+ ++T G + V+
Sbjct: 130 KLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGK-LKTTLAGHV-MTVRD 187
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D+ L + DK + WD+ +I ++Y HL V T++ + T+ D
Sbjct: 188 VAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSV 247
Query: 394 LRVWEFG--IPVV 404
+++W+ IPV+
Sbjct: 248 IKLWDMRTRIPVI 260
>UNIPROTKB|E1BWN2 [details] [associations]
symbol:E1BWN2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0005912 "adherens junction"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031513
"nonmotile primary cilium" evidence=IEA] [GO:0033365 "protein
localization to organelle" evidence=IEA] [GO:0060271 "cilium
morphogenesis" evidence=IEA] Pfam:PF00018 InterPro:IPR017986
InterPro:IPR001452 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PRINTS:PR00452 PROSITE:PS50002 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00326 GO:GO:0005814
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005911 SUPFAM:SSF50044 GO:GO:0005912
GO:GO:0033365 OMA:FKGIPIS GO:GO:0005932 GO:GO:0031513
GeneTree:ENSGT00530000063479 EMBL:AADN02025521 EMBL:AADN02025522
IPI:IPI00588508 Ensembl:ENSGALT00000022607 Uniprot:E1BWN2
Length = 1174
Score = 192 (72.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 61/236 (25%), Positives = 103/236 (43%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYW--DTETGQVIRTFSTGKIPYVV 331
G+ +R + GH V D+ + D LTAS D ++ W +T+ ++ F Y
Sbjct: 653 GQFLREFYGHLNIVYDLCWSKDSQHLLTASSDGTVRMWKIETQVASAVKVFPHPSFVYTA 712
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEI----TQEYDQHLGAVNTITFVDSNRRFVT 387
K +P D ++++ G D I W+ N +EI QE D H +NT+ F D+ +
Sbjct: 713 KYHPVAD--SLVVTGCYDAVIRVWNANVEEIHGQLLQELDGHKSFINTLCF-DTEGLHMF 769
Query: 388 SSDDKSLR-VWEFGIPV----------VIKYISEPHMHSMP--SISLHPNTNWLAAQSLD 434
S D L VW+ + + K I E + P + +HPN L + D
Sbjct: 770 SGDSSGLIIVWDTSVKGSSQCLFQHWRINKEIKENDLRGTPINHLEVHPNGRRLLIHAKD 829
Query: 435 NQILIYSTRERFQLNKKKRFAGHIVAGYACQVN--FSPDGRFVMSGDGEGKCWFWD 488
+ + I R + K++ G Y +++ +P G F+ SG +GK + W+
Sbjct: 830 STLRITDLR----ILATKKYIG--ATNYREKIHSTLTPCGTFLFSGSEDGKAYVWN 879
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 63/252 (25%), Positives = 106/252 (42%)
Query: 288 RDISFCN--DGTKFL-TASYDKNIKYW---DTETGQVIRTFST--GKIPYVVKLNPDDDK 339
R +S+C+ +K L TA + K W D +R ST G I + K DK
Sbjct: 231 RPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDK 290
Query: 340 QNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+++ LA + D + W + + E + + H V + + S R T+ D S R+W+
Sbjct: 291 KDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWD 350
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I + E H + I+ H + + LD ++ R + GH+
Sbjct: 351 LEAQEEILH-QEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCI---MFLEGHL 406
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518
Y +NFSP+G V +G G+ C WD + K T+ H+ + G ++ P + +
Sbjct: 407 KEIYG--LNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFL 464
Query: 519 ATCGWDGLIKYW 530
T +D K W
Sbjct: 465 LTGAYDNTAKIW 476
Score = 148 (57.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 57/250 (22%), Positives = 95/250 (38%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQN 341
H KA +S + + D ++K W E+ + + + V +P
Sbjct: 281 HPKAT--VSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSG---R 335
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
L D WD+ +E + H V I F T D RVW+
Sbjct: 336 FLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRT 395
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
I ++ E H+ + ++ PN +A S DN ++ R+R + ++V G
Sbjct: 396 GRCIMFL-EGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQ-NLVTG 453
Query: 462 YACQVNFSPD-GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
V F P+ G F+++G + W +TL HEG +G + L+ +AT
Sbjct: 454 ----VKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDIS-LDGQLIAT 508
Query: 521 CGWDGLIKYW 530
C +D K W
Sbjct: 509 CSYDRTFKLW 518
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 32/117 (27%), Positives = 52/117 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 341
GHSK V DI+F DG+ T D + WD TG+ I F G + + LN + +
Sbjct: 362 GHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIM-FLEGHLKEIYGLNFSPNGYH 420
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRVW 397
+ G D WD+ ++ H V + F ++ F+ T + D + ++W
Sbjct: 421 VA-TGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIW 476
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 48/161 (29%), Positives = 74/161 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLNPDDDKQN 341
H+ VR F DG ++ S DK IK WDT Q + FS V NP
Sbjct: 13 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTC-- 70
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
I AG SD+ + WD+ ++ Q Y H G VN I+F S +T+S D +L++ + +
Sbjct: 71 IASAG-SDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL-L 128
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
+ Y + H + ++S A+ D Q+L++ T
Sbjct: 129 EGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 169
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 37/156 (23%), Positives = 68/156 (43%)
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
K +PD ++++ DK I WD K+ + +G N + F S ++ D
Sbjct: 21 KFSPDG---RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSD 77
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
++++VW+ + ++++ + H + IS HP+ N+L S D + I E +
Sbjct: 78 QTVKVWDVRVNKLLQHY-QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTL 136
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
+ GH G V+FS G SG + + W
Sbjct: 137 Q---GH--TGPVFTVSFSKGGELFASGGADTQVLLW 167
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 182 (69.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 65/237 (27%), Positives = 107/237 (45%)
Query: 267 EDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
EDKS +G R GHS V+D+ +DG L+ S+D ++ WD TG+ R F G
Sbjct: 48 EDKS--YGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRF-VGH 104
Query: 327 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDM--NTKEITQEYDQHLGAVNTITFVDSNR- 383
V+ + D + I+ A D+ I W+ K E D H V+ + F +
Sbjct: 105 TKDVLSVAFSTDNRQIVSASR-DRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLV 163
Query: 384 -RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
V++S DK+++VW ++ H + ++++ P+ + A+ D IL++
Sbjct: 164 PTIVSASWDKTVKVWNLQ-NCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
Query: 443 RERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
E +L + AG I+ C FSP+ R+ + E WD +S V LK
Sbjct: 223 AEGKKLYSLE--AGSIIHSL-C---FSPN-RYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 57/232 (24%), Positives = 102/232 (43%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYV- 330
G+ R ++GH+K V ++F D + ++AS D+ IK W+T G+ T S G +V
Sbjct: 95 GESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT-LGECKYTISEADGHKEWVS 153
Query: 331 -VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
V+ +P+ I+ A DK + W++ ++ H G +NT+ +
Sbjct: 154 CVRFSPNTLVPTIVSASW-DKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGG 212
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY-----STRE 444
D + +W+ + + + + S+ PN WL A + +N I I+ S E
Sbjct: 213 KDGVILLWDLAEGKKLYSLEAGSI--IHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVVE 269
Query: 445 RFQLNKK---KRFAGHIVAG------YACQVNFSPDGRFVMSG--DGEGKCW 485
+++ K ++ G G Y +N+S DG + SG DG + W
Sbjct: 270 DLKVDLKAEAEKTDGSTGIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVW 321
Score = 116 (45.9 bits), Expect = 0.00059, P = 0.00059
Identities = 46/203 (22%), Positives = 85/203 (41%)
Query: 338 DKQNILLAGMSDKKIVQWDMNTKE-----ITQE-YDQHLGAVNTITFVDSNRRFVTSSDD 391
D ++++ DK I+ W + TKE + Q H V + + ++ S D
Sbjct: 26 DNSDVIVTSSRDKSIILWKL-TKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWD 84
Query: 392 KSLRVWEFGI-PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
LR+W+ +++ H + S++ + + + S D I +++T +
Sbjct: 85 GELRLWDLATGESTRRFVG--HTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTI 142
Query: 451 KKRFAGHIVAGYACQVNFSPDGRF--VMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
+ GH +C V FSP+ ++S + W+ ++CK+ TL H G
Sbjct: 143 SEA-DGH-KEWVSC-VRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTV 199
Query: 509 EWHPLEQSKVATCGWDGLIKYWD 531
P + S A+ G DG+I WD
Sbjct: 200 AVSP-DGSLCASGGKDGVILLWD 221
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 187 (70.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 58/252 (23%), Positives = 108/252 (42%)
Query: 288 RDISFCN--DGTKFL-TASYDKNIKYWDTETGQVIRTF-----STGKIPYVVKLNPDDDK 339
R IS+C+ +K L TA + K W ++ T + G I + K D+
Sbjct: 247 RPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQ 306
Query: 340 QNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+++ LA + D + W +++ E + + H V + + S R T+ D+S R+W+
Sbjct: 307 KDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWD 366
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I + E H + I+ H + + LD ++ R + GH+
Sbjct: 367 LEAQEEILH-QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI---MFLEGHL 422
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518
Y +NFSP+G + +G G+ C WD + + T+ H+ + G ++ P+ + +
Sbjct: 423 KEIYG--INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFL 480
Query: 519 ATCGWDGLIKYW 530
T +D K W
Sbjct: 481 LTGAYDNTAKIW 492
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 55/250 (22%), Positives = 94/250 (37%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQN 341
H K+ +S + + D ++K W ++ + + + V +P
Sbjct: 297 HPKST--VSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSG---R 351
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
L D+ WD+ +E + H V I F T D RVW+
Sbjct: 352 FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT 411
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
I ++ E H+ + I+ PN +A S DN ++ R+R + ++V G
Sbjct: 412 GRCIMFL-EGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ-NLVTG 469
Query: 462 YACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
V F P G F+++G + W +TL HEG +G + + +AT
Sbjct: 470 ----VKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISS-DGQLIAT 524
Query: 521 CGWDGLIKYW 530
C +D K W
Sbjct: 525 CSYDRTFKLW 534
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 187 (70.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 58/252 (23%), Positives = 108/252 (42%)
Query: 288 RDISFCN--DGTKFL-TASYDKNIKYWDTETGQVIRTF-----STGKIPYVVKLNPDDDK 339
R IS+C+ +K L TA + K W ++ T + G I + K D+
Sbjct: 249 RPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQ 308
Query: 340 QNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+++ LA + D + W +++ E + + H V + + S R T+ D+S R+W+
Sbjct: 309 KDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWD 368
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I + E H + I+ H + + LD ++ R + GH+
Sbjct: 369 LEAQEEILH-QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI---MFLEGHL 424
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518
Y +NFSP+G + +G G+ C WD + + T+ H+ + G ++ P+ + +
Sbjct: 425 KEIYG--INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFL 482
Query: 519 ATCGWDGLIKYW 530
T +D K W
Sbjct: 483 LTGAYDNTAKIW 494
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 55/250 (22%), Positives = 94/250 (37%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQN 341
H K+ +S + + D ++K W ++ + + + V +P
Sbjct: 299 HPKST--VSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSG---R 353
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
L D+ WD+ +E + H V I F T D RVW+
Sbjct: 354 FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT 413
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
I ++ E H+ + I+ PN +A S DN ++ R+R + ++V G
Sbjct: 414 GRCIMFL-EGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ-NLVTG 471
Query: 462 YACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
V F P G F+++G + W +TL HEG +G + + +AT
Sbjct: 472 ----VKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISS-DGQLIAT 526
Query: 521 CGWDGLIKYW 530
C +D K W
Sbjct: 527 CSYDRTFKLW 536
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 59/249 (23%), Positives = 113/249 (45%)
Query: 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 345
AVR + F DG LT DK +K W+ G ++RT+S G V+ D + L +
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAAGSFDNSS-LCS 84
Query: 346 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI--PV 403
G DK +V WD+ + ++ +++ H G VNT+ F + ++ S D S+R W+ P
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPE 144
Query: 404 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 463
++ + E + S+ + + + + S+D ++ R+ L + F+ ++ +
Sbjct: 145 PVQTLDEAR-DGISSVKVSDHE--VLSGSVDGRV------RRYDLRMGQLFSDYVGSPIT 195
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ-SKVATCG 522
C FS DG+ + + D + ++ H+ + E+ + V +C
Sbjct: 196 CTC-FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCS 254
Query: 523 WDGLIKYWD 531
DG + +WD
Sbjct: 255 EDGKVYFWD 263
Score = 170 (64.9 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 61/262 (23%), Positives = 108/262 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 331
G +RTY GH V D + D + + DK + WD +GQV+R F GK+ V
Sbjct: 57 GTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVN-TV 115
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDSNRRFVTSS 389
+ N ++ ++L+G D I WD ++ E Q D+ ++++ S+ ++ S
Sbjct: 116 QFN---EEATVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGISSVKV--SDHEVLSGS 170
Query: 390 DDKSLRVWEFGIPVVIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
D +R ++ + + Y+ P + + SLD+ + + ++ +L
Sbjct: 171 VDGRVRRYDLRMGQLFSDYVGSP----ITCTCFSRDGQCTLVSSLDSTLRLLD-KDTGEL 225
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
+ + GH Y S V+S +GK +FWD + L GV
Sbjct: 226 LGE--YTGHKNQEYKLDCCLSERDTHVVSCSEDGKVYFWDLVEGALALALPVGPGVVQSL 283
Query: 509 EWHPLEQSKVATCGWDGLIKYW 530
+HP E + G G + W
Sbjct: 284 AYHPTEPCLLTAMG--GSVHCW 303
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 55/219 (25%), Positives = 102/219 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G+ + ++GH V +S + + ++AS DK +K W+T G+ + T TG +V V
Sbjct: 98 GETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNT-IGECMATL-TGHNDWVSAV 155
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+++P D ++ A DK + WD+ + ++ H G ++ IT ++ D
Sbjct: 156 RISPSDQSSTVISASW-DKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKD 214
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK- 450
+ +W+ + Y E + +++ PN WLAA + I I+ +ER L++
Sbjct: 215 GVIILWDLNKNKTL-YTLEAKAE-VHALAFSPNRYWLAAATTSG-IKIFKLQERSLLDEL 271
Query: 451 KKRFAGHIVAG--YACQVNFSPDGRFVMSG--DGEGKCW 485
K FA A A + +S DG+ + +G D + W
Sbjct: 272 KPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIRVW 310
Score = 144 (55.7 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 46/183 (25%), Positives = 89/183 (48%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
+G +++ GHS V+D++ DG L+AS+D+ ++ WD ETG+ + F G V+
Sbjct: 55 YGIPKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRF-VGHKGDVLS 113
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDM--NTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
++ + + I+ A DK + W+ ++ + AV I+ D + +++S
Sbjct: 114 VSIAKNLRQIVSASR-DKTVKVWNTIGECMATLTGHNDWVSAVR-ISPSDQSSTVISASW 171
Query: 391 DKSLRVWEFG-IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
DK+++ W+ V +I H + I+L P+ + A+ D I+++ LN
Sbjct: 172 DKTVKSWDLADYSVNADFIG--HTGYISCITLSPDGSLCASAGKDGVIILWD------LN 223
Query: 450 KKK 452
K K
Sbjct: 224 KNK 226
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 52/206 (25%), Positives = 85/206 (41%)
Query: 300 LTASYDKNIKYW------DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 353
L+ S DK + W D + G ++F G V + D L A D+ +
Sbjct: 34 LSGSRDKTLIKWKLTGGEDNQYGIPKKSFK-GHSHIVQDVTISADGAYALSASW-DRTLR 91
Query: 354 QWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHM 413
WD+ T E TQ + H G V +++ + R+ V++S DK+++VW +
Sbjct: 92 LWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGECMATLTGHNDW 151
Query: 414 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 473
S IS ++ + + S D + + + + +N F GH GY + SPDG
Sbjct: 152 VSAVRISPSDQSSTVISASWDKTVKSWDLAD-YSVNAD--FIGH--TGYISCITLSPDGS 206
Query: 474 FVMSGDGEGKCWFWDWKSCKVFRTLK 499
S +G WD K TL+
Sbjct: 207 LCASAGKDGVIILWDLNKNKTLYTLE 232
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 49/221 (22%), Positives = 87/221 (39%)
Query: 318 VIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ------EYDQHLG 371
V+R G +V L ++LL+G DK +++W + E Q + H
Sbjct: 8 VLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSH 67
Query: 372 AVNTITFVDSNRRFVTSSDDKSLRVWEFGI-PVVIKYISEPHMHSMPSISLHPNTNWLAA 430
V +T +++S D++LR+W+ +++ H + S+S+ N + +
Sbjct: 68 IVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVG--HKGDVLSVSIAKNLRQIVS 125
Query: 431 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 490
S D + +++T GH A +++ S V+S + WD
Sbjct: 126 ASRDKTVKVWNTIGECMAT----LTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLA 181
Query: 491 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
V H G I C + S A+ G DG+I WD
Sbjct: 182 DYSVNADFIGHTGY-ISCITLSPDGSLCASAGKDGVIILWD 221
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 55/219 (25%), Positives = 102/219 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G+ + ++GH V +S + + ++AS DK +K W+T G+ + T TG +V V
Sbjct: 98 GETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNT-IGECMATL-TGHNDWVSAV 155
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+++P D ++ A DK + WD+ + ++ H G ++ IT ++ D
Sbjct: 156 RISPSDQSSTVISASW-DKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKD 214
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK- 450
+ +W+ + Y E + +++ PN WLAA + I I+ +ER L++
Sbjct: 215 GVIILWDLNKNKTL-YTLEAKAE-VHALAFSPNRYWLAAATTSG-IKIFKLQERSLLDEL 271
Query: 451 KKRFAGHIVAG--YACQVNFSPDGRFVMSG--DGEGKCW 485
K FA A A + +S DG+ + +G D + W
Sbjct: 272 KPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIRVW 310
Score = 144 (55.7 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 46/183 (25%), Positives = 89/183 (48%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
+G +++ GHS V+D++ DG L+AS+D+ ++ WD ETG+ + F G V+
Sbjct: 55 YGIPKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRF-VGHKGDVLS 113
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDM--NTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
++ + + I+ A DK + W+ ++ + AV I+ D + +++S
Sbjct: 114 VSIAKNLRQIVSASR-DKTVKVWNTIGECMATLTGHNDWVSAVR-ISPSDQSSTVISASW 171
Query: 391 DKSLRVWEFG-IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
DK+++ W+ V +I H + I+L P+ + A+ D I+++ LN
Sbjct: 172 DKTVKSWDLADYSVNADFIG--HTGYISCITLSPDGSLCASAGKDGVIILWD------LN 223
Query: 450 KKK 452
K K
Sbjct: 224 KNK 226
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 52/206 (25%), Positives = 85/206 (41%)
Query: 300 LTASYDKNIKYW------DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 353
L+ S DK + W D + G ++F G V + D L A D+ +
Sbjct: 34 LSGSRDKTLIKWKLTGGEDNQYGIPKKSFK-GHSHIVQDVTISADGAYALSASW-DRTLR 91
Query: 354 QWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHM 413
WD+ T E TQ + H G V +++ + R+ V++S DK+++VW +
Sbjct: 92 LWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGECMATLTGHNDW 151
Query: 414 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 473
S IS ++ + + S D + + + + +N F GH GY + SPDG
Sbjct: 152 VSAVRISPSDQSSTVISASWDKTVKSWDLAD-YSVNAD--FIGH--TGYISCITLSPDGS 206
Query: 474 FVMSGDGEGKCWFWDWKSCKVFRTLK 499
S +G WD K TL+
Sbjct: 207 LCASAGKDGVIILWDLNKNKTLYTLE 232
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 49/221 (22%), Positives = 87/221 (39%)
Query: 318 VIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ------EYDQHLG 371
V+R G +V L ++LL+G DK +++W + E Q + H
Sbjct: 8 VLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSH 67
Query: 372 AVNTITFVDSNRRFVTSSDDKSLRVWEFGI-PVVIKYISEPHMHSMPSISLHPNTNWLAA 430
V +T +++S D++LR+W+ +++ H + S+S+ N + +
Sbjct: 68 IVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVG--HKGDVLSVSIAKNLRQIVS 125
Query: 431 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 490
S D + +++T GH A +++ S V+S + WD
Sbjct: 126 ASRDKTVKVWNTIGECMAT----LTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLA 181
Query: 491 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
V H G I C + S A+ G DG+I WD
Sbjct: 182 DYSVNADFIGHTGY-ISCITLSPDGSLCASAGKDGVIILWD 221
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 185 (70.2 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 57/227 (25%), Positives = 95/227 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVV 331
G T GH VR ++ + DK +K WD ET +VIR + G + Y +
Sbjct: 175 GALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYH-GHLSGVYTL 233
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
L+P + ++L+ G D WDM T+ H G V + +++ + +T S D
Sbjct: 234 ALHP---RLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLD 290
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
++R+W+ + ++ H + S++ HP A+ S + F N
Sbjct: 291 ATVRLWDLAAGKTMGVLTH-HKKGIRSLATHPREFTFASASTGSIKQWKCPGGEFMQN-- 347
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498
F GH VN + + SG G FWDWK+ ++T+
Sbjct: 348 --FEGHNAIINTLSVN---EDNVLFSGGDNGSMSFWDWKTGYRYQTI 389
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 60/258 (23%), Positives = 92/258 (35%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
K MR GH VR ++ + F + + D+ IK W+ TG +R TG I V L
Sbjct: 134 KLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATG-ALRLTLTGHISTVRGLA 192
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
+ G DK + WD+ T ++ + Y HL V T+ VT D
Sbjct: 193 VSPRHPYLFSCG-EDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVA 251
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 454
RVW+ I +S H ++ + + SLD + ++ K
Sbjct: 252 RVWDMRTRSNIHVLSG-HTGTVADVQCQEADPQVITGSLDATVRLWD----LAAGKTMGV 306
Query: 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
H G + F + G K WK C ++ EG +
Sbjct: 307 LTHHKKGIRSLATHPREFTFASASTGSIK----QWK-CPGGEFMQNFEGHNAIINTLSVN 361
Query: 515 QSKVATCGWD-GLIKYWD 531
+ V G D G + +WD
Sbjct: 362 EDNVLFSGGDNGSMSFWD 379
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 186 (70.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 58/252 (23%), Positives = 107/252 (42%)
Query: 288 RDISFCN--DGTKFL-TASYDKNIKYWDTETGQVIRTF-----STGKIPYVVKLNPDDDK 339
R IS+C+ +K L TA + K W ++ T + G I + K D+
Sbjct: 231 RPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQ 290
Query: 340 QNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+++ LA + D + W +++ E + + H V + + S R T+ D+S R+W+
Sbjct: 291 KDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWD 350
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I + E H + I+ H + + LD ++ R + GH+
Sbjct: 351 LEAQEEILH-QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI---MFLEGHL 406
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518
Y +NFSP+G + +G G+ C WD + + T+ H+ + G ++ P+ +
Sbjct: 407 KEIYG--INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFL 464
Query: 519 ATCGWDGLIKYW 530
T +D K W
Sbjct: 465 LTGAYDNTAKIW 476
Score = 139 (54.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 55/250 (22%), Positives = 94/250 (37%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQN 341
H K+ +S + + D ++K W ++ + + + V +P
Sbjct: 281 HPKST--VSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSG---R 335
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
L D+ WD+ +E + H V I F T D RVW+
Sbjct: 336 FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT 395
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
I ++ E H+ + I+ PN +A S DN ++ R+R + ++V G
Sbjct: 396 GRCIMFL-EGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ-NLVTG 453
Query: 462 YACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
V F P G F+++G + W +TL HEG +G + + +AT
Sbjct: 454 ----VKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISS-DGQLIAT 508
Query: 521 CGWDGLIKYW 530
C +D K W
Sbjct: 509 CSYDRTFKLW 518
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 184 (69.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 55/257 (21%), Positives = 106/257 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
GKC T+ GH+ + +SF T T S D K WD ++G+ + T TG ++ L
Sbjct: 167 GKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTL-TGHSAEIISL 225
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+ + N ++ G D + W+ +T H +++ F +T S DK+
Sbjct: 226 S-FNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKT 284
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR 453
++W+ + ++ H + +A S D I+S R + K +
Sbjct: 285 CKLWDAVNGKCVATLTG-HDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLE- 342
Query: 454 FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPL 513
GH G +++F+P G +++G + WD ++ + + L+ H C ++
Sbjct: 343 --GH--EGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN-Y 397
Query: 514 EQSKVATCGWDGLIKYW 530
+ + T D + W
Sbjct: 398 KGDIIITGSKDNTCRIW 414
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 51/222 (22%), Positives = 95/222 (42%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLN-PDDDKQ 340
H + +++ G+ F+T SYD+ K WDT +G+ + T + + Y + N P DK
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDK- 149
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
+ G DK W + T + + H + ++F + T S D + ++W+
Sbjct: 150 --IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ + H + S+S + + N + S D+ + ++ E K GH A
Sbjct: 208 SGEEV-FTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVW---EADTGRKVYTLIGHC-A 262
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE 502
+ V F+ D +++G + C WD + K TL H+
Sbjct: 263 EISSAV-FNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHD 303
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 61/264 (23%), Positives = 106/264 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY 329
T G+ + T GH V I+F N G K T S+DK K W ETG+ TF G
Sbjct: 121 TASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFR-GHTAE 179
Query: 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
+V L+ + + ++ G D WD+ + E H + +++F S R +T S
Sbjct: 180 IVCLS-FNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGS 238
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
D ++ VWE + Y H + S + + + + S+D ++ +N
Sbjct: 239 FDHTVTVWEADTGRKV-YTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDA-----VN 292
Query: 450 KK--KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
K GH F G+ + + +G + + + L+ HEG
Sbjct: 293 GKCVATLTGH--DDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISK 350
Query: 508 CEWHPLEQSKVATCGWDGLIKYWD 531
++P + +++ T D + WD
Sbjct: 351 ISFNP-QGNRLLTGSSDKTARIWD 373
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/127 (27%), Positives = 53/127 (41%)
Query: 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYV 330
+GKC+ T GH + D F G TAS D + + T + + G+I +
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKI 351
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
NP ++ LL G SDK WD T + Q + H + + F +T S
Sbjct: 352 -SFNPQGNR---LLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSK 407
Query: 391 DKSLRVW 397
D + R+W
Sbjct: 408 DNTCRIW 414
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 185 (70.2 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 67/264 (25%), Positives = 113/264 (42%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T G+C RT GH+++V + + DG + +AS D+ IK W G + RT G +V
Sbjct: 234 TTAGRCERTLTGHAQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWV 291
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT---QEYDQH-LGAVNTITFVDSNRRFV 386
+ D L G + + +N +++ QE + L N + R V
Sbjct: 292 NTMALSTDYA--LRTGAFEP--AEASVNAQDLRGSLQELKERALSRYNLVRG-QGPERLV 346
Query: 387 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERF 446
+ SDD +L +W H + + P++ +A+ S D I ++ R
Sbjct: 347 SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGK 406
Query: 447 QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
L + GH+ A Y Q+ +S D R ++SG + WD K+ K+ L H
Sbjct: 407 YLASLR---GHVAAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVY 461
Query: 507 GCEWHPLEQSKVATCGWDGLIKYW 530
+W P + +VA+ G D ++ W
Sbjct: 462 AVDWSP-DGQRVASGGKDKCLRIW 484
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 66/273 (24%), Positives = 109/273 (39%)
Query: 268 DKSTFHGKCM-RTYMGHSKAVRDISF----CNDGTKFL-TASYDKNIKYWDTETGQVIRT 321
D ST GK + R GHSK + +S+ N +++ ++S D +++ WDT G+ RT
Sbjct: 185 DPST--GKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERT 242
Query: 322 FSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS 381
TG V L D +L + D+ I W + + + H VNT+
Sbjct: 243 L-TGHAQSVTCLRWGGD--GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 299
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 441
+ + V + ++ + E + S ++ L + S D + ++S
Sbjct: 300 YALRTGAFEPAEASVNAQDLRGSLQELKERAL-SRYNLVRGQGPERLVSGSDDFTLFLWS 358
Query: 442 TRERFQLNKKK--RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
E +KK R GH QV FSPD R + S + WD ++ K +L+
Sbjct: 359 PAE----DKKPLARMTGH--QALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLR 412
Query: 500 CHEGVCIGCEWHPLEQSKVATCGW-DGLIKYWD 531
H W S++ G D +K WD
Sbjct: 413 GHVAAVYQIAWSA--DSRLLVSGSSDSTLKVWD 443
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/132 (27%), Positives = 67/132 (50%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C + GHS+AV ++F G + S D +++WD T + G +V+ ++
Sbjct: 106 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST-ETPHFTCQGHRHWVLSIS 164
Query: 335 --PDDDKQNILLAGMSDKKIVQWDMNT-KEITQEYDQHLGAVNTITF--VDSNR--RFVT 387
PD K L +G + +I+ WD +T K++ + H + +++ + +N R+V
Sbjct: 165 WSPDGKK---LASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVA 221
Query: 388 SSD-DKSLRVWE 398
SS D S+RVW+
Sbjct: 222 SSSKDGSVRVWD 233
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 39/171 (22%), Positives = 71/171 (41%)
Query: 363 TQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLH 422
T + H AV ++ F + + + S D ++R W+ + + H H + SIS
Sbjct: 108 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETP-HFTCQGHRHWVLSISWS 166
Query: 423 PNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI--VAGYACQ-VNFSPDGRFVMSGD 479
P+ LA+ + QIL++ Q+ + GH + + + ++ +P+ R+V S
Sbjct: 167 PDGKKLASGCKNGQILLWDPSTGKQVGRA--LTGHSKWITALSWEPLHANPECRYVASSS 224
Query: 480 GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530
+G WD + + RTL H W + + D IK W
Sbjct: 225 KDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGG--DGLLYSASQDRTIKVW 273
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 180 (68.4 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 62/262 (23%), Positives = 108/262 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 331
G +RTY GH V D + D + + DK + WD TGQV+R F GK+ V
Sbjct: 57 GTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVN-TV 115
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDSNRRFVTSS 389
+ N ++ ++L+G D + WD ++ E Q D+ ++++ S+ + S
Sbjct: 116 QFN---EEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKV--SDHEILAGS 170
Query: 390 DDKSLRVWEFGI-PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
D +R ++ + V Y+ P + + SLD+ + + ++ +L
Sbjct: 171 VDGRVRRYDLRMGQVTSDYVGSP----ITCTCFSRDGQCTLISSLDSTLRLLD-KDTGEL 225
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
+ + GH Y S V+S +GK +FWD + L V
Sbjct: 226 LGE--YVGHKNQKYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGSLALALPVGSNVVQSL 283
Query: 509 EWHPLEQSKVATCGWDGLIKYW 530
+HP + + G G I+YW
Sbjct: 284 AYHPADPCLLTAMG--GSIQYW 303
Score = 178 (67.7 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 60/249 (24%), Positives = 112/249 (44%)
Query: 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 345
AVR + F DG LT DK +K W+ G ++RT+S G V+ D + L +
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAAGSFDNSH-LCS 84
Query: 346 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI--PV 403
G DK +V WD+ T ++ +++ H G VNT+ F + ++ S D S+R W+ P
Sbjct: 85 GGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPE 144
Query: 404 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 463
++ + E + S+ + + + A S+D ++ R+ L + + ++ +
Sbjct: 145 PVQTLDEAR-DGISSVKVSDHE--ILAGSVDGRV------RRYDLRMGQVTSDYVGSPIT 195
Query: 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ-SKVATCG 522
C FS DG+ + + D + ++ H+ + E+ + V +C
Sbjct: 196 CTC-FSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERDTHVVSCS 254
Query: 523 WDGLIKYWD 531
DG + +WD
Sbjct: 255 EDGKVFFWD 263
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 189 (71.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 62/259 (23%), Positives = 116/259 (44%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R S V+ + L + Y+ ++ W+ ET +++TF +P V+ +
Sbjct: 9 RKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLP--VRASKFV 66
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++N ++ G D +I ++ NT E ++ H + I + +TSSDD +++W
Sbjct: 67 ARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLW 126
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIY---STRERFQLNKKKR 453
++ + E H H + I ++P + N A+ SLD I ++ S+ F L
Sbjct: 127 DWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE---- 182
Query: 454 FAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWH 511
GH G C +S D +++SG + WD+++ +TL+ H + C +H
Sbjct: 183 --GHD-KGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH-AQNVSCVNFH 238
Query: 512 PLEQSKVATCGWDGLIKYW 530
P E + T DG ++ W
Sbjct: 239 P-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 185 (70.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 58/252 (23%), Positives = 107/252 (42%)
Query: 288 RDISFCN--DGTKFL-TASYDKNIKYWDTETGQVIRTF-----STGKIPYVVKLNPDDDK 339
R IS+C+ +K L TA + K W ++ T + G I + K D
Sbjct: 232 RPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDP 291
Query: 340 QNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+++ LA + D + W +++ E + + H V + + S R T+ D+S R+W+
Sbjct: 292 KDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWD 351
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I + E H + I+ H + + LD ++ R + GH+
Sbjct: 352 LEAQEEILH-QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI---MFLEGHL 407
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518
Y +NFSP+G + +G G+ C WD + + T+ H+ + G ++ P+ + +
Sbjct: 408 KEIYG--INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFL 465
Query: 519 ATCGWDGLIKYW 530
T +D K W
Sbjct: 466 LTGAYDNTAKIW 477
Score = 139 (54.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 55/250 (22%), Positives = 94/250 (37%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQN 341
H K+ +S + + D ++K W ++ + + + V +P
Sbjct: 282 HPKST--VSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSG---R 336
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
L D+ WD+ +E + H V I F T D RVW+
Sbjct: 337 FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT 396
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
I ++ E H+ + I+ PN +A S DN ++ R+R + ++V G
Sbjct: 397 GRCIMFL-EGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ-NLVTG 454
Query: 462 YACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
V F P G F+++G + W +TL HEG +G + + +AT
Sbjct: 455 ----VKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISS-DGQLIAT 509
Query: 521 CGWDGLIKYW 530
C +D K W
Sbjct: 510 CSYDRTFKLW 519
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 189 (71.6 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 61/259 (23%), Positives = 118/259 (45%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPD 336
R + S V+ + T L A Y+ N+ W+ ET ++++F +P K P
Sbjct: 9 RKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVP- 67
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
+++ ++ G D I ++ NT E +++ H + ++ + ++SSDD +++
Sbjct: 68 --RKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKM 125
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERFQLNKKK-RF 454
W++ +K E H H + I+++P + N A SLD + ++ +F N
Sbjct: 126 WDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVW----QFGSNVPNFTL 181
Query: 455 AGHIVAGYACQVNFSPDGR--FVMSGDGEGKCWFWDWKSCKVFRTLKCH-EGVCIGCEWH 511
GH G C V++ G +++SG + WD+++ +TL H + V C +H
Sbjct: 182 EGH-EKGVNC-VDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVC-FH 238
Query: 512 PLEQSKVATCGWDGLIKYW 530
P E + T D ++ W
Sbjct: 239 P-ELPLIITGSEDSTVRLW 256
Score = 131 (51.2 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 46/192 (23%), Positives = 84/192 (43%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LLA + + + W+ T+ + + ++ V FV VT SDD +RV+ +
Sbjct: 30 LLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRKSWVVTGSDDMHIRVFNYNTL 89
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462
+ E H + S+ +HP ++ + S D + ++ ++ + K+ F GH Y
Sbjct: 90 ERVHQF-EAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAM--KQSFEGH--THY 144
Query: 463 ACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE-GV-CIGCEWHPLEQSKVA 519
Q+ +P D + + W + S TL+ HE GV C+ +H E+ +
Sbjct: 145 VMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDY-YHGGEKPYII 203
Query: 520 TCGWDGLIKYWD 531
+ D L+K WD
Sbjct: 204 SGADDHLVKIWD 215
>UNIPROTKB|E2RBU1 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000122 GO:GO:0030512 GeneTree:ENSGT00630000089849 CTD:11171
KO:K13137 OMA:LWQTTVG EMBL:AAEX03015237 RefSeq:XP_543790.1
ProteinModelPortal:E2RBU1 Ensembl:ENSCAFT00000020131 GeneID:486663
KEGG:cfa:486663 Uniprot:E2RBU1
Length = 350
Score = 181 (68.8 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 64/258 (24%), Positives = 111/258 (43%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G + T++GH AV + D TK TA+ D K WD +G + T + I V
Sbjct: 49 GDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDF 108
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEIT-QEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
D N LL G DK + +D+N E +E H + + +++ + S+DDK
Sbjct: 109 TQDS---NYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSADDK 164
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++R+W+ +K ++ +M S+ S+ P L + I +S L+ K
Sbjct: 165 TVRLWDHATMTEVKSLNF-NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---VSLDPIK 218
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
F A + P+ F+++G + K + +D+ S + + K H G I C
Sbjct: 219 SFEAPATINSA---SLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFS 274
Query: 513 LEQSKVATCGWDGLIKYW 530
+ A+ DG ++ W
Sbjct: 275 PDGELYASGSEDGTLRLW 292
Score = 134 (52.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 56/222 (25%), Positives = 91/222 (40%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDK 339
+ H V+ + F D LT DK ++ +D + +G + K L +DK
Sbjct: 97 LAHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDK 156
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
Q IL A DK + WD T + + ++ +V+++ ++ V + +S+ +
Sbjct: 157 Q-ILSA--DDKTVRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSI-AFHS 210
Query: 400 GIPV-VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ + IK P ++ S SLHP +L A D ++ Y +L K GH
Sbjct: 211 AVSLDPIKSFEAPA--TINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYK---GHF 265
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500
C V FSPDG SG +G W K + KC
Sbjct: 266 -GPIHC-VRFSPDGELYASGSEDGTLRLWQTVVGKTYGLWKC 305
>UNIPROTKB|Q9Y3F4 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0005634 Reactome:REACT_111102
Pathway_Interaction_DB:tgfbrpathway GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0007179 EMBL:CH471094 GO:GO:0030512 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:AJ010025 EMBL:AB024327 EMBL:AF161496 EMBL:AY049776
EMBL:AL136691 EMBL:BT020044 EMBL:BT020045 EMBL:AK312295
EMBL:BC000162 EMBL:BC062306 IPI:IPI00941907 RefSeq:NP_009109.3
UniGene:Hs.504895 ProteinModelPortal:Q9Y3F4 SMR:Q9Y3F4
IntAct:Q9Y3F4 MINT:MINT-1346033 STRING:Q9Y3F4 PhosphoSite:Q9Y3F4
DMDM:12643951 OGP:Q9Y3F4 PaxDb:Q9Y3F4 PeptideAtlas:Q9Y3F4
PRIDE:Q9Y3F4 DNASU:11171 Ensembl:ENST00000419869 GeneID:11171
KEGG:hsa:11171 UCSC:uc001rdc.4 GeneCards:GC12P016035
HGNC:HGNC:30796 HPA:HPA027320 MIM:605986 neXtProt:NX_Q9Y3F4
PharmGKB:PA134867032 InParanoid:Q9Y3F4 PhylomeDB:Q9Y3F4
ChiTaRS:STRAP GenomeRNAi:11171 NextBio:42509 ArrayExpress:Q9Y3F4
Bgee:Q9Y3F4 CleanEx:HS_STRAP Genevestigator:Q9Y3F4
GermOnline:ENSG00000023734 Uniprot:Q9Y3F4
Length = 350
Score = 181 (68.8 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 64/258 (24%), Positives = 111/258 (43%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G + T++GH AV + D TK TA+ D K WD +G + T + I V
Sbjct: 49 GDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDF 108
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEIT-QEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
D N LL G DK + +D+N E +E H + + +++ + S+DDK
Sbjct: 109 TQDS---NYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSADDK 164
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++R+W+ +K ++ +M S+ S+ P L + I +S L+ K
Sbjct: 165 TVRLWDHATMTEVKSLNF-NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---VSLDPIK 218
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
F A + P+ F+++G + K + +D+ S + + K H G I C
Sbjct: 219 SFEAPATINSA---SLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFS 274
Query: 513 LEQSKVATCGWDGLIKYW 530
+ A+ DG ++ W
Sbjct: 275 PDGELYASGSEDGTLRLW 292
Score = 134 (52.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 56/222 (25%), Positives = 91/222 (40%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDK 339
+ H V+ + F D LT DK ++ +D + +G + K L +DK
Sbjct: 97 LAHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDK 156
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
Q IL A DK + WD T + + ++ +V+++ ++ V + +S+ +
Sbjct: 157 Q-ILSA--DDKTVRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSI-AFHS 210
Query: 400 GIPV-VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ + IK P ++ S SLHP +L A D ++ Y +L K GH
Sbjct: 211 AVSLDPIKSFEAPA--TINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYK---GHF 265
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500
C V FSPDG SG +G W K + KC
Sbjct: 266 -GPIHC-VRFSPDGELYASGSEDGTLRLWQTVVGKTYGLWKC 305
>ZFIN|ZDB-GENE-040426-1110 [details] [associations]
symbol:strap "serine/threonine kinase receptor
associated protein" species:7955 "Danio rerio" [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1110 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016301 HSSP:P16649
GeneTree:ENSGT00630000089849 EMBL:BX649476 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG
OrthoDB:EOG4CRM0M EMBL:BC049525 EMBL:BC065428 IPI:IPI00506790
RefSeq:NP_956598.1 UniGene:Dr.12320 STRING:Q7ZW92 DNASU:393274
Ensembl:ENSDART00000013224 Ensembl:ENSDART00000124627 GeneID:393274
KEGG:dre:393274 InParanoid:Q7ZW92 NextBio:20814331 Uniprot:Q7ZW92
Length = 329
Score = 180 (68.4 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 62/258 (24%), Positives = 113/258 (43%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G + T++GH AV + + TK TA+ D K WD TG + T + I V
Sbjct: 49 GDWIGTFLGHKGAVWGATLNTEATKAATAAADFTAKVWDAVTGDEVLTLAHKHIVKSVNF 108
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEIT-QEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
D N LL G +DK + +D++ E QE H A+ + +++++ ++++DDK
Sbjct: 109 TQDS---NYLLTGGNDKVLRIYDLSKPEAEPQEIAGHTSAIKKALWCNNDQQILSAADDK 165
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++R+W+ +K +S S+ S+ P+ L + I Y+ L K
Sbjct: 166 TIRLWDKNTNEAVKTLSFDA--SVSSMEYIPDGETLVI-TYGRTIAFYNAHS-LDLIKTV 221
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
I + + PD F ++G + K + +D+ + + + K H G + C
Sbjct: 222 DAPASIHSA-----SLHPDKDFFVAGGDDFKLYKYDYTTKEEMESYKGHFGP-VHCVRFS 275
Query: 513 LEQSKVATCGWDGLIKYW 530
+ A+ DG ++ W
Sbjct: 276 PDGELYASGSEDGTLRLW 293
Score = 161 (61.7 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 56/223 (25%), Positives = 96/223 (43%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDK 339
+ H V+ ++F D LT DK ++ +D + G + K L ++D+
Sbjct: 97 LAHKHIVKSVNFTQDSNYLLTGGNDKVLRIYDLSKPEAEPQEIAGHTSAIKKALWCNNDQ 156
Query: 340 QNILLAGMSDKKIVQWDMNTKEI--TQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
Q +L+ DK I WD NT E T +D +V+++ ++ V + +++ +
Sbjct: 157 Q--ILSAADDKTIRLWDKNTNEAVKTLSFD---ASVSSMEYIPDGETLVITYG-RTIAFY 210
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+IK + P S+ S SLHP+ ++ A D ++ Y + ++ K GH
Sbjct: 211 NAHSLDLIKTVDAPA--SIHSASLHPDKDFFVAGGDDFKLYKYDYTTKEEMESYK---GH 265
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500
+ C V FSPDG SG +G W K + KC
Sbjct: 266 FGPVH-C-VRFSPDGELYASGSEDGTLRLWQTAVGKTYGLWKC 306
Score = 145 (56.1 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 34/134 (25%), Positives = 67/134 (50%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
DK+T + ++T + +V + + DG + L +Y + I +++ + +I+T
Sbjct: 171 DKNT--NEAVKT-LSFDASVSSMEYIPDG-ETLVITYGRTIAFYNAHSLDLIKTVDAPAS 226
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVT 387
+ L+PD D +AG D K+ ++D TKE + Y H G V+ + F + +
Sbjct: 227 IHSASLHPDKD---FFVAGGDDFKLYKYDYTTKEEMESYKGHFGPVHCVRFSPDGELYAS 283
Query: 388 SSDDKSLRVWEFGI 401
S+D +LR+W+ +
Sbjct: 284 GSEDGTLRLWQTAV 297
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 184 (69.8 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 57/228 (25%), Positives = 104/228 (45%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G+ + GH +VR + + DK +K WD E +VIR + G + V L
Sbjct: 216 GQLKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYH-GHLSAVQAL 274
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+ ++L+ D WDM TK + H V + + + +T+S D +
Sbjct: 275 SVHPSL-DVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDAT 333
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR 453
+R+W+ + ++ H S+ ++++HP N A+ S DN ++++L K +
Sbjct: 334 VRLWDLAAGRSMCTLTH-HKKSVRALTIHPRLNMFASASPDNI-------KQWKLPKGE- 384
Query: 454 FAGHIVAGYACQVNF--SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
F ++ +G+ +N S D V+SG G FWDW+S F+ ++
Sbjct: 385 FMQNL-SGHNAIINTLSSNDDGVVVSGADNGSLCFWDWRSGFCFQKIQ 431
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 41/134 (30%), Positives = 64/134 (47%)
Query: 269 KSTFHG--KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
K +H K R GH+ VR + F + D+ IK WD +GQ ++ TG
Sbjct: 167 KPKWHAPWKLYRVASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQ-LKLSLTGH 225
Query: 327 IPYV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
I V VK++P + L +G DK++ WD+ ++ + Y HL AV ++ S
Sbjct: 226 ISSVRAVKVSP---RHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDV 282
Query: 385 FVTSSDDKSLRVWE 398
VT + D + RVW+
Sbjct: 283 LVTCARDSTARVWD 296
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 46/189 (24%), Positives = 87/189 (46%)
Query: 345 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS-DDKSLRVWEFGIPV 403
+G +D+ I WD+ + ++ H+ +V + V F+ S +DK ++ W+
Sbjct: 201 SGGADRIIKIWDLASGQLKLSLTGHISSVRAVK-VSPRHPFLFSGGEDKQVKCWDLEYNK 259
Query: 404 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI--VAG 461
VI++ H+ ++ ++S+HP+ + L + D+ ++ R + Q++ FAGH VA
Sbjct: 260 VIRHY-HGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHC---FAGHTNTVAD 315
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
CQ S D + V++ + WD + + TL H+ HP + A+
Sbjct: 316 VVCQ---SVDPQ-VITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHP-RLNMFASA 370
Query: 522 GWDGLIKYW 530
D IK W
Sbjct: 371 SPDN-IKQW 378
>UNIPROTKB|B4DNJ6 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0016301 "kinase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0030054 "cell
junction" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005739 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0016301 HOGENOM:HOG000174258
HOVERGEN:HBG055228 OMA:LWQTTVG UniGene:Hs.504895 HGNC:HGNC:30796
ChiTaRS:STRAP EMBL:AC022073 EMBL:AK297942 IPI:IPI00294536
SMR:B4DNJ6 IntAct:B4DNJ6 STRING:B4DNJ6 Ensembl:ENST00000025399
UCSC:uc010shw.2 Uniprot:B4DNJ6
Length = 363
Score = 181 (68.8 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 64/258 (24%), Positives = 111/258 (43%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G + T++GH AV + D TK TA+ D K WD +G + T + I V
Sbjct: 62 GDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDF 121
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEIT-QEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
D N LL G DK + +D+N E +E H + + +++ + S+DDK
Sbjct: 122 TQDS---NYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSADDK 177
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++R+W+ +K ++ +M S+ S+ P L + I +S L+ K
Sbjct: 178 TVRLWDHATMTEVKSLNF-NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---VSLDPIK 231
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
F A + P+ F+++G + K + +D+ S + + K H G I C
Sbjct: 232 SFEAPATINSA---SLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFS 287
Query: 513 LEQSKVATCGWDGLIKYW 530
+ A+ DG ++ W
Sbjct: 288 PDGELYASGSEDGTLRLW 305
Score = 134 (52.2 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 56/222 (25%), Positives = 91/222 (40%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDK 339
+ H V+ + F D LT DK ++ +D + +G + K L +DK
Sbjct: 110 LAHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDK 169
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
Q IL A DK + WD T + + ++ +V+++ ++ V + +S+ +
Sbjct: 170 Q-ILSA--DDKTVRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSI-AFHS 223
Query: 400 GIPV-VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
+ + IK P ++ S SLHP +L A D ++ Y +L K GH
Sbjct: 224 AVSLDPIKSFEAPA--TINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYK---GHF 278
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500
C V FSPDG SG +G W K + KC
Sbjct: 279 -GPIHC-VRFSPDGELYASGSEDGTLRLWQTVVGKTYGLWKC 318
>UNIPROTKB|I3LNC4 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030512 "negative regulation of transforming growth
factor beta receptor signaling pathway" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 OMA:LWQTTVG EMBL:FP325218
Ensembl:ENSSSCT00000023218 Uniprot:I3LNC4
Length = 363
Score = 181 (68.8 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 64/258 (24%), Positives = 111/258 (43%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G + T++GH AV + D TK TA+ D K WD +G + T + I V
Sbjct: 62 GDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDF 121
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEIT-QEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
D N LL G DK + +D+N E +E H + + +++ + S+DDK
Sbjct: 122 TQDS---NYLLTGGQDKLLRIYDLNKPEAEPKEISGHSSGIKKALWCSEDKQ-ILSADDK 177
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++R+W+ +K ++ +M S+ S+ P L + I +S L+ K
Sbjct: 178 TVRLWDHATMTEVKSLNF-NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---ISLDPIK 231
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
F A + P+ F+++G + K + +D+ S + + K H G I C
Sbjct: 232 SFEAPATINSA---SLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFS 287
Query: 513 LEQSKVATCGWDGLIKYW 530
+ A+ DG ++ W
Sbjct: 288 PDGELYASGSEDGTLRLW 305
Score = 134 (52.2 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 57/222 (25%), Positives = 91/222 (40%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDK 339
+ H V+ + F D LT DK ++ +D + +G + K L +DK
Sbjct: 110 LAHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHSSGIKKALWCSEDK 169
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
Q IL A DK + WD T + + ++ +V+++ ++ V + +S+ +
Sbjct: 170 Q-ILSA--DDKTVRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSI-AFHS 223
Query: 400 GIPV-VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I + IK P ++ S SLHP +L A D ++ Y +L K GH
Sbjct: 224 AISLDPIKSFEAPA--TINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYK---GHF 278
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500
C V FSPDG SG +G W K + KC
Sbjct: 279 -GPIHC-VRFSPDGELYASGSEDGTLRLWQTVVGKTYGLWKC 318
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 185 (70.2 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 52/203 (25%), Positives = 91/203 (44%)
Query: 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
Y + PD + LL+ D I WD+ + T Y H V + + F ++
Sbjct: 343 YSTRFLPDS---SALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASA 399
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448
S D + R+W F ++ I H+ + + HPN+N+LA S D + ++S + Q
Sbjct: 400 SYDHTARLWSFDRTYPLR-IYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQ---QG 455
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
N + F GH C + FSP+G++++S + WD S +++ L H
Sbjct: 456 NSVRLFTGHC-GPVRC-LAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSV 513
Query: 509 EWHPLEQSKVATCGWDGLIKYWD 531
+ L+ S +A+ D ++ WD
Sbjct: 514 TFS-LDSSVIASASMDNSVRIWD 535
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 44/201 (21%), Positives = 92/201 (45%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD 337
Y GH+ V D+ F +ASYD + W + +R ++ G + V VK +P+
Sbjct: 377 YQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYA-GHLAGVDCVKFHPNS 435
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
N L G +DK + W + + H G V + F + + V++ +D+ L++W
Sbjct: 436 ---NYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLW 492
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ + K + H + S++ +++ +A+ S+DN + I+ + + +
Sbjct: 493 DLASGTLYKDL-HGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPADGSSSE 551
Query: 458 IVAGYACQVNFSPDGRFVMSG 478
++ Y Q++ + +F M+G
Sbjct: 552 LLGVYTGQMSTVLNVQF-MAG 571
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 277 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPD 336
+R Y GH V + F + T S DK ++ W + G +R F TG V L
Sbjct: 416 LRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLF-TGHCGPVRCLAFS 474
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
+ Q ++ AG D+ + WD+ + + ++ H + ++TF + ++S D S+R+
Sbjct: 475 PNGQYLVSAG-EDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRI 533
Query: 397 WE 398
W+
Sbjct: 534 WD 535
Score = 133 (51.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/164 (24%), Positives = 74/164 (45%)
Query: 369 HLGAVNTITFVDSNRRFVTSSDDKSLRVWEF-GIPVVIKYISEPHMHSMPSISLHPNTNW 427
H G V + F+ + ++ S+D S+R W+ + Y + H + + + + P++ +
Sbjct: 338 HCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLY--QGHAYPVWDLDISPHSLF 395
Query: 428 LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487
A+ S D+ ++S + L + +AGH+ AG C V F P+ ++ +G + W
Sbjct: 396 FASASYDHTARLWSFDRTYPL---RIYAGHL-AGVDC-VKFHPNSNYLATGSTDKTVRLW 450
Query: 488 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+ R H G + P Q V+ G D L+K WD
Sbjct: 451 SAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSA-GEDQLLKLWD 493
>MGI|MGI:1329037 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005102 "receptor binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1329037 EMBL:AF096285 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005102
GO:GO:0005681 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
ChiTaRS:STRAP EMBL:AK075804 EMBL:AK077504 EMBL:AK145971
EMBL:AK152283 IPI:IPI00918973 RefSeq:NP_035629.2 UniGene:Mm.22584
ProteinModelPortal:Q9Z1Z2 SMR:Q9Z1Z2 STRING:Q9Z1Z2
PhosphoSite:Q9Z1Z2 REPRODUCTION-2DPAGE:IPI00130670
REPRODUCTION-2DPAGE:Q9Z1Z2 PaxDb:Q9Z1Z2 PRIDE:Q9Z1Z2
Ensembl:ENSMUST00000064910 GeneID:20901 KEGG:mmu:20901
NextBio:299765 Bgee:Q9Z1Z2 Genevestigator:Q9Z1Z2
GermOnline:ENSMUSG00000030224 Uniprot:Q9Z1Z2
Length = 350
Score = 180 (68.4 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 64/258 (24%), Positives = 110/258 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G + T++GH AV + D TK TA+ D K WD +G + T + I V
Sbjct: 49 GDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDF 108
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEIT-QEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
D N LL G DK + +D+N E +E H + + +++ + S+DDK
Sbjct: 109 TQDS---NYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSDDKQ-ILSADDK 164
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++R+W+ +K ++ +M S+ S+ P L + I +S L K
Sbjct: 165 TVRLWDHATMTEVKSLNF-NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---VSLEPIK 218
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
F A + P+ F+++G + K + +D+ S + + K H G I C
Sbjct: 219 SFEAPATINSA---SLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFS 274
Query: 513 LEQSKVATCGWDGLIKYW 530
+ A+ DG ++ W
Sbjct: 275 PDGELYASGSEDGTLRLW 292
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 57/221 (25%), Positives = 88/221 (39%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDK 339
+ H V+ + F D LT DK ++ +D + +G + K L DDK
Sbjct: 97 LAHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSDDK 156
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
Q IL A DK + WD T + + ++ +V+++ ++ V + +S+
Sbjct: 157 Q-ILSA--DDKTVRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSIAFHSA 211
Query: 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459
IK P ++ S SLHP +L A D ++ Y +L K GH
Sbjct: 212 VSLEPIKSFEAPA--TINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYK---GHF- 265
Query: 460 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500
C V FSPDG SG +G W K + KC
Sbjct: 266 GPIHC-VRFSPDGELYASGSEDGTLRLWQTVVGKTYGLWKC 305
>RGD|1311114 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005102 "receptor binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030054 "cell
junction" evidence=ISO] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1311114 GO:GO:0005739 GO:GO:0005886 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:BC083714 IPI:IPI00364585 RefSeq:NP_001011969.1
UniGene:Rn.228807 ProteinModelPortal:Q5XIG8 IntAct:Q5XIG8
STRING:Q5XIG8 PRIDE:Q5XIG8 Ensembl:ENSRNOT00000009923 GeneID:297699
KEGG:rno:297699 UCSC:RGD:1311114 InParanoid:Q5XIG8 NextBio:642559
Genevestigator:Q5XIG8 Uniprot:Q5XIG8
Length = 350
Score = 180 (68.4 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 64/258 (24%), Positives = 110/258 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G + T++GH AV + D TK TA+ D K WD +G + T + I V
Sbjct: 49 GDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDF 108
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEIT-QEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
D N LL G DK + +D+N E +E H + + +++ + S+DDK
Sbjct: 109 TQDS---NYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSADDK 164
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++R+W+ +K ++ +M S+ S+ P L + I +S L K
Sbjct: 165 TVRLWDHATMTEVKSLNF-NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---VSLEPIK 218
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
F A + P+ F+++G + K + +D+ S + + K H G I C
Sbjct: 219 SFEAPATINSA---SLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFS 274
Query: 513 LEQSKVATCGWDGLIKYW 530
+ A+ DG ++ W
Sbjct: 275 PDGELYASGSEDGTLRLW 292
Score = 134 (52.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 56/221 (25%), Positives = 88/221 (39%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDK 339
+ H V+ + F D LT DK ++ +D + +G + K L +DK
Sbjct: 97 LAHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDK 156
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
Q IL A DK + WD T + + ++ +V+++ ++ V + +S+
Sbjct: 157 Q-ILSA--DDKTVRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSIAFHSA 211
Query: 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459
IK P ++ S SLHP +L A D ++ Y +L K GH
Sbjct: 212 VSLEPIKSFEAPA--TINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYK---GHF- 265
Query: 460 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500
C V FSPDG SG +G W K + KC
Sbjct: 266 GPIHC-VRFSPDGELYASGSEDGTLRLWQTVVGKTYGLWKC 305
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 184 (69.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 61/253 (24%), Positives = 104/253 (41%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWD----TETGQVIRTFSTGKIPYVVKLNPDD 337
G + + SF DG T S K W+ T T V++ V +P D
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVV--FSPVD 310
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
D L +D+ W + + Q ++ HL + + F S + T+S DK+ R+W
Sbjct: 311 D---CLATASADRTAKLWKTDGT-LLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLW 366
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ + + E H S+ I+ + A+ LD+ ++ R + F GH
Sbjct: 367 DINTGAEL-LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILV---FQGH 422
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 517
I ++ VNFSP+G + SG + +C WD + K + H + ++ P E
Sbjct: 423 IKPVFS--VNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYF 480
Query: 518 VATCGWDGLIKYW 530
+AT +D + W
Sbjct: 481 LATASYDMKVNIW 493
Score = 157 (60.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 62/249 (24%), Positives = 98/249 (39%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
H + D+ F TAS D+ K W T+ G +++TF G + + ++
Sbjct: 297 HKERATDVVFSPVDDCLATASADRTAKLWKTD-GTLLQTFE-GHLDRLARV-AFHPSGKY 353
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
L DK WD+NT + H +V I F + D RVW+
Sbjct: 354 LGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTG 413
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462
I + + H+ + S++ PN LA+ DNQ I+ R R L H A
Sbjct: 414 RSI-LVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI---IPAH--ANL 467
Query: 463 ACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521
QV + P +G F+ + + K W + + ++L HE + + S +AT
Sbjct: 468 VSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDI-TADSSCIATV 526
Query: 522 GWDGLIKYW 530
D IK W
Sbjct: 527 SHDRTIKLW 535
Score = 154 (59.3 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 48/186 (25%), Positives = 79/186 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
G ++T+ GH + ++F G K+L T SYDK + WD TG + G V
Sbjct: 329 GTLLQTFEGHLDRLARVAFHPSG-KYLGTTSYDKTWRLWDINTGAEL-LLQEGHSRSVYG 386
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
+ D G+ V WD+ T + H+ V ++ F + + +D
Sbjct: 387 IAFQQDGALAASCGLDSLARV-WDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDN 445
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRERFQLNKK 451
R+W+ + + YI H + + + P + LA S D ++ I+S R+ F L K
Sbjct: 446 QCRIWDLRMRKSL-YIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRD-FSLVKS 503
Query: 452 KRFAGH 457
AGH
Sbjct: 504 --LAGH 507
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 183 (69.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 68/268 (25%), Positives = 116/268 (43%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T G+C + GH+++V + + DG + ++S D+ IK W ++ G + RT G +V
Sbjct: 246 TLMGRCDKILTGHTQSVTCVKWGGDGLLY-SSSQDRTIKVWRSQDGILCRTLQ-GHAHWV 303
Query: 331 VKLNPDDDKQNILLAGM---SDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDSNRRF 385
+ D +L G ++ I DM+ E+ + Q V R
Sbjct: 304 NTMALSTDY--VLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRG----QGPERL 357
Query: 386 VTSSDDKSLRVWEFGIPVVIKYISEP---HMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
V+ SDD +L +W P K E H + + P+T +A+ S D I ++
Sbjct: 358 VSGSDDFTLFLWR---PAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEG 414
Query: 443 RERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE 502
R L + GH+ A Y Q+ +S D R ++SG + WD ++ K+ L H
Sbjct: 415 RTGKYLTSLR---GHVSAVY--QIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHA 469
Query: 503 GVCIGCEWHPLEQSKVATCGWDGLIKYW 530
+W P + +VA+ G D ++ W
Sbjct: 470 DEVFATDWSP-DGQRVASGGKDKCLRIW 496
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 187 (70.9 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 58/258 (22%), Positives = 116/258 (44%)
Query: 277 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPD 336
++ + S V+ I F LT Y+ I+ W T ++++ ++P V+
Sbjct: 6 VKQFSTRSDRVKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELP--VRAGKF 63
Query: 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
++N ++ G D +I ++ NT E +++ H + +I S +TSSDD ++++
Sbjct: 64 IARKNWIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKL 123
Query: 397 WEFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 455
W + ++ E H H + S++ +P + N A+ LD + I+S Q N
Sbjct: 124 WNWDHNWKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLGSS-QPNFT--LI 180
Query: 456 GHIVAGYACQVNFSP--DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPL 513
H G V++ P D ++++ + WD+++ TL+ H +HP
Sbjct: 181 AHEAKGVN-YVDYYPQADKPYLITSSDDKTIKVWDYQTKSCVATLEGHLSNVSFAIFHP- 238
Query: 514 EQSKVATCGWDGLIKYWD 531
E + + DG I++W+
Sbjct: 239 ELPIIVSGSEDGTIRFWN 256
Score = 135 (52.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 41/186 (22%), Positives = 86/186 (46%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG-QVIRTFSTGKIPYVVK 332
G+ + + H +R I+ LT+S D IK W+ + ++ +TF G YV+
Sbjct: 87 GEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLWNWDHNWKLEQTFE-GHQHYVMS 145
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLG-AVNTITFV-DSNRRF-VTSS 389
+N + N + D+ + W + + + H VN + + +++ + +TSS
Sbjct: 146 VNFNPKDPNTFASACLDRTVKIWSLGSSQPNFTLIAHEAKGVNYVDYYPQADKPYLITSS 205
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449
DDK+++VW++ + + E H+ ++ HP + + S D I +++ F+L
Sbjct: 206 DDKTIKVWDYQTKSCVATL-EGHLSNVSFAIFHPELPIIVSGSEDGTIRFWNSNT-FKLE 263
Query: 450 KKKRFA 455
K ++
Sbjct: 264 KSINYS 269
Score = 38 (18.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 481 EGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
EG F+DW+ K+ R + + + I W
Sbjct: 447 EGCISFYDWEHGKLVRRVDLDDDI-IDVIW 475
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 181 (68.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 61/260 (23%), Positives = 105/260 (40%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
GKC T+ GH+ + ++F T T S D K WD E+G+ + T + G ++ L
Sbjct: 167 GKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLA-GHFAEIISL 225
Query: 334 --NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
N D+ L+ G D + WD+ + H G ++ + F T+S D
Sbjct: 226 CFNTTGDR---LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLD 282
Query: 392 KSLRVWEF-GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 450
KS +VW+ G + + H + + + +A S D ++ST + FQ
Sbjct: 283 KSCKVWDAEGGQCLATLLG--HNDEVLDVCFNYTGQLIATASADGTSRVFST-DTFQC-- 337
Query: 451 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
+ GH G +V F+ G V++ + W K+ + L+ H C +
Sbjct: 338 LCQLEGH--KGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAF 395
Query: 511 HPLEQSKVATCGWDGLIKYW 530
+ E + T D + W
Sbjct: 396 N-YEGDTIITGSKDNTCRIW 414
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 55/261 (21%), Positives = 106/261 (40%)
Query: 267 EDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
+D+ F+ R H + +++F G+ F+T SYD+ K WDT +G+ + T +
Sbjct: 77 KDERKFY--LFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHR 134
Query: 327 -IPYVVKLN-PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
+ Y + N P DK + G DK W T + + H + + F +
Sbjct: 135 NVVYAIAFNNPYGDK---VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTL 191
Query: 385 FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
T S D + ++W+ + ++ H + S+ + + L S D+ +++
Sbjct: 192 VATGSMDTTAKLWDVESGEEVSTLAG-HFAEIISLCFNTTGDRLVTGSFDHTAILWDVPS 250
Query: 445 RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 504
+++ G I +C V F+ D + + + C WD + + TL H
Sbjct: 251 GRKVHVLSGHRGEI----SC-VQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDE 305
Query: 505 CIGCEWHPLEQSKVATCGWDG 525
+ ++ Q +AT DG
Sbjct: 306 VLDVCFNYTGQL-IATASADG 325
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 50/243 (20%), Positives = 86/243 (35%)
Query: 291 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSD 349
S C + K L + + D + R +P V N + + G D
Sbjct: 57 SSCVEQVKLLICKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSG---SCFITGSYD 113
Query: 350 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDS-NRRFVTSSDDKSLRVWEFGIPVVIKYI 408
+ WD + E + H V I F + + T S DK+ ++W Y
Sbjct: 114 RTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCF-YT 172
Query: 409 SEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNF 468
H + ++ +P + +A S+D ++ +++ AGH + F
Sbjct: 173 FRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVST---LAGHFAE--IISLCF 227
Query: 469 SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 528
+ G +++G + WD S + L H G I C + S +AT D K
Sbjct: 228 NTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGE-ISCVQFNWDCSLIATASLDKSCK 286
Query: 529 YWD 531
WD
Sbjct: 287 VWD 289
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 181 (68.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 67/264 (25%), Positives = 113/264 (42%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T G+C R GH+++V + + DG + +AS D+ IK W G + RT G +V
Sbjct: 184 TTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWV 241
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT---QEY-DQHLGAVNTITFVDSNRRFV 386
+ D L G + + +N +++ QE D+ L N + R V
Sbjct: 242 NTMALSTDYA--LRTGAFEP--AEASINAQDLQGSLQELKDRALRRYNLVRG-QGPERLV 296
Query: 387 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERF 446
+ SDD +L +W H + + P++ +A+ S D I ++ R
Sbjct: 297 SGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGK 356
Query: 447 QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
L + GH+ A Y Q+ +S D R ++SG + WD K+ K+ L H
Sbjct: 357 YLASLR---GHVAAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVY 411
Query: 507 GCEWHPLEQSKVATCGWDGLIKYW 530
+W P + +VA+ G D ++ W
Sbjct: 412 AVDWSP-DGQRVASGGKDKCLRIW 434
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 62/273 (22%), Positives = 107/273 (39%)
Query: 268 DKSTFHGKCM-RTYMGHSKAVRDISF----CNDGTKFL-TASYDKNIKYWDTETGQVIRT 321
D ST GK + R GHSK + +S+ N +++ ++S D +++ WDT G+ R
Sbjct: 135 DPST--GKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERI 192
Query: 322 FSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS 381
TG V L D +L + D+ I W + + + H VNT+
Sbjct: 193 L-TGHTQSVTCLRWGGD--GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 249
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 441
+ + + + ++ + + + ++ L + S D + ++S
Sbjct: 250 YALRTGAFEPAEASINAQDLQGSLQELKDRALRRY-NLVRGQGPERLVSGSDDFTLFMWS 308
Query: 442 TRERFQLNKKK--RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
E +KK R GH QV FSPD R + S + WD ++ K +L+
Sbjct: 309 PAE----DKKPLARMTGH--QALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLR 362
Query: 500 CHEGVCIGCEWHPLEQSKVATCGW-DGLIKYWD 531
H W S++ G D +K WD
Sbjct: 363 GHVAAVYQIAWSA--DSRLLVSGSSDSTLKVWD 393
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 39/171 (22%), Positives = 72/171 (42%)
Query: 363 TQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLH 422
T + H AV ++ F + + + S D ++R W+ + + H H + SIS
Sbjct: 58 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETP-HFTCQGHRHWVLSISWS 116
Query: 423 PNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI--VAGYACQ-VNFSPDGRFVMSGD 479
P+ LA+ + QIL++ Q+ + AGH + G + + ++ +P+ R++ S
Sbjct: 117 PDGKTLASGCKNGQILLWDPSTGKQVGRV--LAGHSKWITGLSWEPLHANPECRYMASSS 174
Query: 480 GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530
+G WD + + R L H W + + D IK W
Sbjct: 175 KDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG--DGLLYSASQDRTIKVW 223
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 33/130 (25%), Positives = 65/130 (50%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C + GHS+AV ++F G + S D +++WD T + G +V+ ++
Sbjct: 56 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST-ETPHFTCQGHRHWVLSIS 114
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNT-KEITQEYDQHLGAVNTITF--VDSN---RRFVTS 388
D + L +G + +I+ WD +T K++ + H + +++ + +N R +S
Sbjct: 115 WSPDGKT-LASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASS 173
Query: 389 SDDKSLRVWE 398
S D S+RVW+
Sbjct: 174 SKDGSVRVWD 183
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 188 (71.2 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 63/236 (26%), Positives = 101/236 (42%)
Query: 287 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAG 346
VR ++F DG T D+ I+ WD +V R TG + L+ D + L++G
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLL-TGHEQEIYSLDFSKDGKT-LVSG 406
Query: 347 MSDKKIVQWDMNTKEITQEYDQHLG-AVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVI 405
D+ + WD+ E Q+ H V T+ F + S DK +R+W +V
Sbjct: 407 SGDRTVCLWDVEAGE--QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVE 464
Query: 406 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS----TRERFQLNK-----KKRFAG 456
+ H S+ S++ P+ +L + SLDN I ++ + + K K+ F G
Sbjct: 465 QL--HGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTG 522
Query: 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
H + V SPDG++++SG + FW S TL+ H I P
Sbjct: 523 H--KDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSP 576
Score = 155 (59.6 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 56/234 (23%), Positives = 108/234 (46%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST------GKIPYV--VKLN 334
H+ + + F DG KFL ++ ++ ETG++I G + YV V +
Sbjct: 298 HTSVICYVRFSADG-KFLATGCNRAAMVFNVETGKLITLLQEESSKREGDL-YVRSVAFS 355
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
PD L G+ D++I WD+ K + + H + ++ F + V+ S D+++
Sbjct: 356 PDG---KYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTV 412
Query: 395 RVW--EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
+W E G +I + + + ++ P+ ++AA SLD I I+++ +
Sbjct: 413 CLWDVEAGEQKLILHTDD----GVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLV----E 464
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK-VFRTLKCHEGVC 505
+ GH + Y+ V FSPDG++++SG + W+ + V ++ G+C
Sbjct: 465 QLHGHEESVYS--VAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGIC 516
Score = 151 (58.2 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 49/224 (21%), Positives = 90/224 (40%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R GH + + + F DG ++ S D+ + WD E G+ T V +PD
Sbjct: 382 RLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDG 441
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
+ AG DK I W ++ + ++ H +V ++ F + V+ S D ++++W
Sbjct: 442 Q---FIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLW 497
Query: 398 EFGI-----PV------VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERF 446
E P + K H + S+++ P+ W+ + S D I +S
Sbjct: 498 ELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSP- 556
Query: 447 QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 490
+ + GH V SP+G +G G+ + W ++
Sbjct: 557 --HSQLTLQGH--NNSVISVAVSPNGHCFATGSGDLRARIWSYE 596
Score = 39 (18.8 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 9 FSLKLG--MDLLQNYADEKEGDL 29
F+++ G + LLQ + ++EGDL
Sbjct: 325 FNVETGKLITLLQEESSKREGDL 347
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 184 (69.8 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 59/237 (24%), Positives = 110/237 (46%)
Query: 300 LTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT 359
L + Y+ ++ W+ ET +++TF +P V+ ++N ++ G D +I ++ NT
Sbjct: 2 LASLYNGSVCVWNHETQTLVKTFEVCDLP--VRAAKFVARKNWVVTGADDMQIRVFNYNT 59
Query: 360 KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI 419
E ++ H + I + +TSSDD +++W++ + E H H + I
Sbjct: 60 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 119
Query: 420 SLHP-NTNWLAAQSLDNQILIY---STRERFQLNKKKRFAGHIVAGYACQVNFSP-DGRF 474
++P + N A+ SLD I ++ S+ F L GH G C +S D +
Sbjct: 120 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE------GH-EKGVNCIDYYSGGDKPY 172
Query: 475 VMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQSKVATCGWDGLIKYW 530
++SG + WD+++ +TL+ H + C +HP E + T DG ++ W
Sbjct: 173 LISGADDRLVKIWDYQNKTCVQTLEGH-AQNVSCASFHP-ELPIIITGSEDGTVRIW 227
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 37/165 (22%), Positives = 70/165 (42%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL--NPDD 337
+ HS +R I+ LT+S D IK WD + G YV+++ NP D
Sbjct: 66 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 125
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR--FVTSSDDKSLR 395
+ Q + D+ I W + + + H VN I + + ++ +DD+ ++
Sbjct: 126 NNQ--FASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 183
Query: 396 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
+W++ ++ + E H ++ S HP + S D + I+
Sbjct: 184 IWDYQNKTCVQTL-EGHAQNVSCASFHPELPIIITGSEDGTVRIW 227
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 177 (67.4 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 64/237 (27%), Positives = 106/237 (44%)
Query: 267 EDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326
+DKS +G R GHS V D+ +DG L+ S+D ++ WD TG+ R F G
Sbjct: 48 DDKS--YGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRF-VGH 104
Query: 327 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDM--NTKEITQEYDQHLGAVNTITFVDSNR- 383
V+ + D + I+ A D+ I W+ K E D H V+ + F +
Sbjct: 105 TKDVLSVAFSTDNRQIVSASR-DRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLV 163
Query: 384 -RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
V++S DK+++VW ++ H + ++++ P+ + A+ D IL++
Sbjct: 164 PTIVSASWDKTVKVWNLQ-NCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
Query: 443 RERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
E +L + AG I+ C FSP+ R+ + E WD +S V LK
Sbjct: 223 AEGKKLYSLE--AGSIIHSL-C---FSPN-RYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 173 (66.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 63/228 (27%), Positives = 103/228 (45%)
Query: 283 HSKAVRDISFCNDGTKFL-TASYDKNIKYW----DTETGQVIRTFSTGKIPYVVKLNPDD 337
H+ V I+ D + + TAS DK+I W D ++ V + TG +V +
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
D Q L+G D ++ WD+ T E T+ + H V ++ F NR+ V++S D+++++W
Sbjct: 74 DGQ-FALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 398 E-FGIPVVIKY-ISEPHMHS--MPSISLHPNT--NWLAAQSLDNQILIYSTRERFQLNKK 451
G KY ISE H + + PNT + + S D + +++ + +
Sbjct: 133 NTLG---ECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN---CKLR 186
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
GH +GY V SPDG SG +G WD K +L+
Sbjct: 187 NSLVGH--SGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 57/232 (24%), Positives = 103/232 (44%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK--IPYV- 330
G+ R ++GH+K V ++F D + ++AS D+ IK W+T G+ T S G +V
Sbjct: 95 GETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT-LGECKYTISEGDGHKEWVS 153
Query: 331 -VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
V+ +P+ I+ A DK + W++ ++ H G +NT+ +
Sbjct: 154 CVRFSPNTLVPTIVSASW-DKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGG 212
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY-----STRE 444
D + +W+ + + + + S+ PN WL A + +N I I+ S E
Sbjct: 213 KDGVILLWDLAEGKKLYSLEAGSI--IHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVVE 269
Query: 445 RFQLNKK---KRFAGHIVAG------YACQVNFSPDGRFVMSG--DGEGKCW 485
+++ K ++ G + G Y +N+S DG + SG DG + W
Sbjct: 270 DLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVW 321
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 185 (70.2 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 62/259 (23%), Positives = 115/259 (44%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R S V+ + L + Y+ ++ W+ ET +++TF +P V+
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLP--VRAAKFV 66
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++N ++ G D +I ++ NT E ++ H + I + +TSSDD +++W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIY---STRERFQLNKKKR 453
++ + E H H + I ++P + N A+ SLD I ++ S+ F L
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE---- 182
Query: 454 FAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWH 511
GH G C +S D +++SG + WD+++ +TL+ H + C +H
Sbjct: 183 --GH-EKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH-AQNVSCASFH 238
Query: 512 PLEQSKVATCGWDGLIKYW 530
P E + T DG ++ W
Sbjct: 239 P-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 185 (70.2 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 62/259 (23%), Positives = 115/259 (44%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R S V+ + L + Y+ ++ W+ ET +++TF +P V+
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLP--VRAAKFV 66
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++N ++ G D +I ++ NT E ++ H + I + +TSSDD +++W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIY---STRERFQLNKKKR 453
++ + E H H + I ++P + N A+ SLD I ++ S+ F L
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE---- 182
Query: 454 FAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWH 511
GH G C +S D +++SG + WD+++ +TL+ H + C +H
Sbjct: 183 --GH-EKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH-AQNVSCASFH 238
Query: 512 PLEQSKVATCGWDGLIKYW 530
P E + T DG ++ W
Sbjct: 239 P-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 185 (70.2 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 62/259 (23%), Positives = 115/259 (44%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R S V+ + L + Y+ ++ W+ ET +++TF +P V+
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLP--VRAAKFV 66
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++N ++ G D +I ++ NT E ++ H + I + +TSSDD +++W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIY---STRERFQLNKKKR 453
++ + E H H + I ++P + N A+ SLD I ++ S+ F L
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE---- 182
Query: 454 FAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWH 511
GH G C +S D +++SG + WD+++ +TL+ H + C +H
Sbjct: 183 --GH-EKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH-AQNVSCASFH 238
Query: 512 PLEQSKVATCGWDGLIKYW 530
P E + T DG ++ W
Sbjct: 239 P-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 185 (70.2 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 62/259 (23%), Positives = 115/259 (44%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R S V+ + L + Y+ ++ W+ ET +++TF +P V+
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLP--VRAAKFV 66
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++N ++ G D +I ++ NT E ++ H + I + +TSSDD +++W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIY---STRERFQLNKKKR 453
++ + E H H + I ++P + N A+ SLD I ++ S+ F L
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE---- 182
Query: 454 FAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWH 511
GH G C +S D +++SG + WD+++ +TL+ H + C +H
Sbjct: 183 --GH-EKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH-AQNVSCASFH 238
Query: 512 PLEQSKVATCGWDGLIKYW 530
P E + T DG ++ W
Sbjct: 239 P-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 185 (70.2 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 62/259 (23%), Positives = 115/259 (44%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R S V+ + L + Y+ ++ W+ ET +++TF +P V+
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLP--VRAAKFV 66
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++N ++ G D +I ++ NT E ++ H + I + +TSSDD +++W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIY---STRERFQLNKKKR 453
++ + E H H + I ++P + N A+ SLD I ++ S+ F L
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE---- 182
Query: 454 FAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWH 511
GH G C +S D +++SG + WD+++ +TL+ H + C +H
Sbjct: 183 --GH-EKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH-AQNVSCASFH 238
Query: 512 PLEQSKVATCGWDGLIKYW 530
P E + T DG ++ W
Sbjct: 239 P-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 185 (70.2 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 62/259 (23%), Positives = 115/259 (44%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337
R S V+ + L + Y+ ++ W+ ET +++TF +P V+
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLP--VRAAKFV 66
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
++N ++ G D +I ++ NT E ++ H + I + +TSSDD +++W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 398 EFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIY---STRERFQLNKKKR 453
++ + E H H + I ++P + N A+ SLD I ++ S+ F L
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE---- 182
Query: 454 FAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWH 511
GH G C +S D +++SG + WD+++ +TL+ H + C +H
Sbjct: 183 --GH-EKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH-AQNVSCVSFH 238
Query: 512 PLEQSKVATCGWDGLIKYW 530
P E + T DG ++ W
Sbjct: 239 P-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 185 (70.2 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 74/266 (27%), Positives = 118/266 (44%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 338
T GH VR +SF +D L+A+ D +IK W+ T Q IRT T + P D
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTM-TCEYALCSFFVPGD- 466
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+Q ++ G K+ +D+ + + + D H GA+ +++ R FVT DKS++ W+
Sbjct: 467 RQVVI--GTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWD 524
Query: 399 FGIPV----VIKYISEPHMHSMP------SISLHPNTNWLAAQSLDNQILI-YSTRERFQ 447
F + K +S ++ +S PN LA LD + I Y +F
Sbjct: 525 FELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFF 584
Query: 448 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSG--DGEGKCWFWDWKSCKVFRTLKCHEGVC 505
L+ GH + C ++ S DG + +G D K W D+ C ++L H+
Sbjct: 585 LS----LYGHKLP-VIC-MDISHDGALIATGSADRNVKIWGLDFGDCH--KSLFAHDDSV 636
Query: 506 IGCEWHPLEQSKVATCGWDGLIKYWD 531
+ ++ P + T G D IK WD
Sbjct: 637 MYLQFVP-KSHLFFTAGKDHKIKQWD 661
Score = 131 (51.2 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRT-FSTGKIPYVVKLNPDDDKQ 340
GH V + +DG T S D+N+K W + G ++ F+ ++ P K
Sbjct: 589 GHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVP---KS 645
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
++ D KI QWD + E Q + H + + S V+SS DKSLR+WE
Sbjct: 646 HLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 185 (70.2 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 67/278 (24%), Positives = 127/278 (45%)
Query: 269 KSTFHGKCMRT-YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
KS+ + K + + GH VR ++ D T ++ S+ + +K W+ TG +RT +G
Sbjct: 390 KSSENAKTVTIEHQGHRSDVRSVTLSEDNTLLMSTSHSE-VKIWNPSTGSCLRTIDSG-- 446
Query: 328 PY-VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV 386
Y + L +K I+ +I+ TK +E H G + +IT + ++ FV
Sbjct: 447 -YGLCSLIVPQNKYGIVGTKSGVLEIIDIGSATK--VEEVKAHGGTIWSITPIPNDSGFV 503
Query: 387 TSSDDKSLRVWEFGIPV----VIKYISEPHMHSMP------SISLHPNTNWLAAQSLDNQ 436
T S D ++ WE+ + K ++ ++ SM ++++ P+ +A LD+
Sbjct: 504 TVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDST 563
Query: 437 ILI-YSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG--DGEGKCWFWDWKSCK 493
+ + Y +F L+ GH + C ++ S DG +++G D K W D+ C
Sbjct: 564 VKVFYMDSLKFYLS----LYGHKLP-VMC-IDISSDGELIVTGSQDKNLKIWGLDFGDCH 617
Query: 494 VFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+++ H +G ++ + + G D L+KYWD
Sbjct: 618 --KSIFAHGDSVMGVKF-VRNTHYLFSIGKDRLVKYWD 652
Score = 155 (59.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 44/164 (26%), Positives = 75/164 (45%)
Query: 282 GHSKAVRDISFCNDGTKFLTASY-DKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQ 340
G S AV I+ + + + Y D +I+ WDTE G F++ K V L +
Sbjct: 63 GPSLAVTSIA--SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHK-GAVTALRYNK-VG 118
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
++L +G D I+ WD+ + H V + F+D ++ V+SS DK LRVW+
Sbjct: 119 SMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLE 178
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
++ +S H S+ P ++ S D ++ Y+ +E
Sbjct: 179 TQHCMQIVSGHHSEVW-SVDTDPEERYVVTGSADQELRFYAVKE 221
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 181 (68.8 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 60/255 (23%), Positives = 106/255 (41%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDK 339
+M +AV ++F D + + D IK W TGQ +R F + L D
Sbjct: 260 FMMMEQAVLALNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDN 319
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399
+L A D + + + ++ +E+ H VN TF +++S D +++VW
Sbjct: 320 SQVLSASF-DYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSL 378
Query: 400 GIP-VVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERF--QLNKKKRFA 455
V Y + ++ ++ + P N + N ++I + + + + KR
Sbjct: 379 KTTECVATYKPLGNELAVNTVLILPKNPEHFIVCNRSNTVVIMNMQGQIVRSFSSGKREG 438
Query: 456 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 515
G ++ SP G F+ + + + S K+ RTL HE IG HP Q
Sbjct: 439 GAFISA-----TLSPRGEFIYCAGEDQVLYCFSVSSGKLERTLNVHEKDVIGLTHHP-HQ 492
Query: 516 SKVATCGWDGLIKYW 530
+ +A+ DGL+K W
Sbjct: 493 NLLASYSEDGLLKLW 507
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 181 (68.8 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 60/255 (23%), Positives = 120/255 (47%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG--KIPYVVKLNPDDDK 339
GH +V + + G K T+S+D+ IK W+++TG +I+T S ++ ++ L+ D
Sbjct: 280 GHKGSVTCVRWGGTG-KIYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLA-LSTDF-- 335
Query: 340 QNILLAGMSDK--KIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
IL D K+ + D + + ++ + +N V+ + V++SDD ++ +W
Sbjct: 336 --ILRTAYHDHTGKVPESDADKVAMAKKRFEKAATINN-KIVE---KLVSASDDFTMYLW 389
Query: 398 --EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 455
E V + + H + ++ P+ ++A+ DN + +++ R+ + +
Sbjct: 390 DPESSSKPVARLLG--HQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLR--- 444
Query: 456 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 515
GH+ A Y C FS D R ++S + W+ ++ K+ L H+ +W P +
Sbjct: 445 GHVGAVYQCC--FSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSP-DG 501
Query: 516 SKVATCGWDGLIKYW 530
KV + G D I+ W
Sbjct: 502 QKVGSGGKDKAIRIW 516
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 59/266 (22%), Positives = 118/266 (44%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333
G + T GH+ V +S+ +G T S D ++ WD + GQ + G + ++ L
Sbjct: 181 GTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSL 240
Query: 334 --NPDDDKQN---ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS 388
P +Q+ L + D + WD+ +K H G+V + + + + + TS
Sbjct: 241 AWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIY-TS 299
Query: 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQI--LIYSTRERF 446
S D++++VW +I+ +S H H + ++L +T+++ + + + S ++
Sbjct: 300 SHDRTIKVWNSQTGTLIQTLSA-HAHRVNHLAL--STDFILRTAYHDHTGKVPESDADKV 356
Query: 447 QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSC-KVFRTLKCHEGVC 505
+ KKRF A +N + V + D + + WD +S K L H+
Sbjct: 357 AM-AKKRFEK------AATINNKIVEKLVSASD-DFTMYLWDPESSSKPVARLLGHQKEV 408
Query: 506 IGCEWHPLEQSKVATCGWDGLIKYWD 531
+ P + + +A+ G+D +K W+
Sbjct: 409 NHVTFSP-DMAYIASAGFDNHVKLWN 433
Score = 127 (49.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 26/117 (22%), Positives = 57/117 (48%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQ 340
+GH K V ++F D +A +D ++K W+ G+ I T G + V + D +
Sbjct: 402 LGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLR-GHVGAVYQCCFSADSR 460
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
+L++ D + W++ T +++++ H V + + ++ + DK++R+W
Sbjct: 461 -LLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 181 (68.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 57/252 (22%), Positives = 107/252 (42%)
Query: 288 RDISFCN--DGTKFL-TASYDKNIKYWDTETGQVIRTF-----STGKIPYVVKLNPDDDK 339
R IS+C+ +K L TA + K W ++ T + G I + K D+
Sbjct: 231 RPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQ 290
Query: 340 QNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
+++ LA + D + W +++ E + + H V + + S R T+ D+S R+W+
Sbjct: 291 KDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWD 350
Query: 399 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
I + E H + I+ H + + LD ++ R + GH+
Sbjct: 351 LEAQEEILH-QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI---MFLEGHL 406
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518
Y ++FSP+G + +G G+ C WD + + T+ H+ + G ++ P+ +
Sbjct: 407 KEIYG--ISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFL 464
Query: 519 ATCGWDGLIKYW 530
T +D K W
Sbjct: 465 LTGAYDNTAKIW 476
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 56/250 (22%), Positives = 94/250 (37%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQN 341
H K+ +S + + D ++K W ++ + + + V +P
Sbjct: 281 HPKST--VSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSG---R 335
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
L D+ WD+ +E + H V I F T D RVW+
Sbjct: 336 FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT 395
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
I ++ E H+ + IS PN +A S DN ++ R+R + ++V G
Sbjct: 396 GRCIMFL-EGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ-NLVTG 453
Query: 462 YACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
V F P G F+++G + W +TL HEG +G + + +AT
Sbjct: 454 ----VKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISS-DGQLIAT 508
Query: 521 CGWDGLIKYW 530
C +D K W
Sbjct: 509 CSYDRTFKLW 518
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 181 (68.8 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 61/251 (24%), Positives = 114/251 (45%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 342
+SK V + + +D K ++ D +IK WD ++ + ++ TG V+ L D+ +
Sbjct: 224 NSKGVYCLQYDDD--KIISGLRDNSIKIWDKQSLECLKVL-TGHTGSVLCLQYDE---RV 277
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG-- 400
++ G SD + WD+++ E+ H AV + F N VT S D+S+ VW+
Sbjct: 278 IVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWDMASA 335
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 336 TDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 389
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 520
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 390 GIAC-LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCI--RFDNKRIVS 443
Query: 521 CGWDGLIKYWD 531
+DG IK WD
Sbjct: 444 GAYDGKIKVWD 454
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 62/276 (22%), Positives = 116/276 (42%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
DK + +C++ GH+ +V + + D +T S D ++ WD +G+V+ T
Sbjct: 251 DKQSL--ECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVSSGEVLNTLIHHN- 305
Query: 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDM-NTKEIT--QEYDQHLGAVNTITFVDSNRR 384
V+ L + +++ D+ I WDM + +I+ + H AVN + F D +
Sbjct: 306 EAVLHLRFCN---GLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDD--KY 360
Query: 385 FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
V++S D++++VW +++ + H L + + S DN I ++
Sbjct: 361 IVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC 417
Query: 445 RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK---------SCKVF 495
L + GH C + F D + ++SG +GK WD + S
Sbjct: 418 GACL---RVLEGHEEL-VRC-IRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 470
Query: 496 RTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
RTL H G ++ ++ ++ + D I WD
Sbjct: 471 RTLVEHSGRVFRLQF---DEFQIISSSHDDTILIWD 503
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 180 (68.4 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 55/244 (22%), Positives = 104/244 (42%)
Query: 290 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 349
I + +G + + A+Y W+ + T V + D + +++G +D
Sbjct: 99 IQWTPEGRRLVVATYSGEFSLWNASSF-TFETLMQAHDSAVTTMKYSHDS-DWMISGDAD 156
Query: 350 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYIS 409
I W N + + H ++ + F ++ +FVT SDD L++W F + +S
Sbjct: 157 GMIKIWQPNFSMVKEIDAAHTESIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLS 216
Query: 410 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 469
H + S HP +A+ S DN + ++ R ++ +F H V + F
Sbjct: 217 GHHW-DVKSCDWHPEMGLIASASKDNLVKLWDPRSGNCISSILKFK-HTVL----KTRFQ 270
Query: 470 PD-GRFVMSGDGEGKCWFWDWK-SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLI 527
P G +M+ + C +D + S K ++ E + EWHP+ +S +DG +
Sbjct: 271 PTKGNLLMAISKDKSCRVFDIRYSMKELMCVR-DETDYMTLEWHPINESMFTLACYDGSL 329
Query: 528 KYWD 531
K++D
Sbjct: 330 KHFD 333
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 184 (69.8 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 59/237 (24%), Positives = 110/237 (46%)
Query: 300 LTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT 359
L + Y+ ++ W+ ET +++TF +P V+ ++N ++ G D +I ++ NT
Sbjct: 2 LASLYNGSVCVWNHETQTLVKTFEVCDLP--VRAAKFVARKNWVVTGADDMQIRVFNYNT 59
Query: 360 KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI 419
E ++ H + I + +TSSDD +++W++ + E H H + I
Sbjct: 60 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 119
Query: 420 SLHP-NTNWLAAQSLDNQILIY---STRERFQLNKKKRFAGHIVAGYACQVNFSP-DGRF 474
++P + N A+ SLD I ++ S+ F L GH G C +S D +
Sbjct: 120 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE------GH-EKGVNCIDYYSGGDKPY 172
Query: 475 VMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQSKVATCGWDGLIKYW 530
++SG + WD+++ +TL+ H + C +HP E + T DG ++ W
Sbjct: 173 LISGADDRLVKIWDYQNKTCVQTLEGH-AQNVSCASFHP-ELPIIITGSEDGTVRIW 227
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 37/165 (22%), Positives = 70/165 (42%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL--NPDD 337
+ HS +R I+ LT+S D IK WD + G YV+++ NP D
Sbjct: 66 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 125
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR--FVTSSDDKSLR 395
+ Q + D+ I W + + + H VN I + + ++ +DD+ ++
Sbjct: 126 NNQ--FASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 183
Query: 396 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
+W++ ++ + E H ++ S HP + S D + I+
Sbjct: 184 IWDYQNKTCVQTL-EGHAQNVSCASFHPELPIIITGSEDGTVRIW 227
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 54/244 (22%), Positives = 100/244 (40%)
Query: 287 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAG 346
+ + + +G + L AS+ W+ T + P + + D+ LL+G
Sbjct: 138 INTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQAHESPILTMKYSNHDEW--LLSG 195
Query: 347 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIK 406
+ + W N + H V I F ++ +F+T DD ++++W F +
Sbjct: 196 DQNGTVKYWQPNFNNVNN-ISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEER 254
Query: 407 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 466
+S H + S HPN + + S DN + ++ R ++ F H V +
Sbjct: 255 TLSGHHWE-VKSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFK-HTVN----KT 308
Query: 467 NFSPDG--RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQSKVATCGW 523
F P+G R + S + C +D ++ K ++ E + C WHP+ S V T +
Sbjct: 309 RFQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRDSE-TDLSCVAWHPIHASMVTTAAY 367
Query: 524 DGLI 527
+G I
Sbjct: 368 NGSI 371
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 38/177 (21%), Positives = 71/177 (40%)
Query: 356 DMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 415
D+ TK + ++ +NT+ + RR + +S +W G+ + I + H
Sbjct: 121 DLQTKFVHLSSNKVKHTINTVKWTPEGRRLLVASHSGEFTLWN-GMTFNFETIMQAHESP 179
Query: 416 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP-DGRF 474
+ ++ + WL + + + + N + H A + FSP D +F
Sbjct: 180 ILTMKYSNHDEWLLSGDQNGTVKYWQPN----FNNVNNISAH--ANGVRDIAFSPNDSKF 233
Query: 475 VMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+ GD + W++ + K RTL H +WHP + + D L+K WD
Sbjct: 234 LTCGD-DSAIKIWNFNNGKEERTLSGHHWEVKSADWHP-NLGLIVSGSKDNLVKLWD 288
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 54/244 (22%), Positives = 100/244 (40%)
Query: 287 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAG 346
+ + + +G + L AS+ W+ T + P + + D+ LL+G
Sbjct: 138 INTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQAHESPILTMKYSNHDEW--LLSG 195
Query: 347 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIK 406
+ + W N + H V I F ++ +F+T DD ++++W F +
Sbjct: 196 DQNGTVKYWQPNFNNVNN-ISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEER 254
Query: 407 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 466
+S H + S HPN + + S DN + ++ R ++ F H V +
Sbjct: 255 TLSGHHWE-VKSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFK-HTVN----KT 308
Query: 467 NFSPDG--RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQSKVATCGW 523
F P+G R + S + C +D ++ K ++ E + C WHP+ S V T +
Sbjct: 309 RFQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRDSE-TDLSCVAWHPIHASMVTTAAY 367
Query: 524 DGLI 527
+G I
Sbjct: 368 NGSI 371
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 38/177 (21%), Positives = 71/177 (40%)
Query: 356 DMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 415
D+ TK + ++ +NT+ + RR + +S +W G+ + I + H
Sbjct: 121 DLQTKFVHLSSNKVKHTINTVKWTPEGRRLLVASHSGEFTLWN-GMTFNFETIMQAHESP 179
Query: 416 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP-DGRF 474
+ ++ + WL + + + + N + H A + FSP D +F
Sbjct: 180 ILTMKYSNHDEWLLSGDQNGTVKYWQPN----FNNVNNISAH--ANGVRDIAFSPNDSKF 233
Query: 475 VMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+ GD + W++ + K RTL H +WHP + + D L+K WD
Sbjct: 234 LTCGD-DSAIKIWNFNNGKEERTLSGHHWEVKSADWHP-NLGLIVSGSKDNLVKLWD 288
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 183 (69.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 73/267 (27%), Positives = 117/267 (43%)
Query: 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV-KLNPDD 337
T GH VR +SF +D L+A+ D +IK W+ T Q IRT + Y +
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAILSAAAD-SIKIWNRSTLQCIRTMAC---EYALCSFFVPG 465
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
D+Q ++ G K+ +D+ + + + D H GA+ +++ R FVT DKS++ W
Sbjct: 466 DRQVVI--GTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFW 523
Query: 398 EFGIPV----VIKYISEPHMHSMP------SISLHPNTNWLAAQSLDNQILI-YSTRERF 446
+F + K +S ++ +S PN LA LD + I Y +F
Sbjct: 524 DFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKF 583
Query: 447 QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG--DGEGKCWFWDWKSCKVFRTLKCHEGV 504
L+ GH + C ++ S DG + +G D K W D+ C ++L H+
Sbjct: 584 FLS----LYGHKLP-VIC-MDISYDGALIATGSADRNVKIWGLDFGDCH--KSLFAHDDS 635
Query: 505 CIGCEWHPLEQSKVATCGWDGLIKYWD 531
+ + P + T G D IK WD
Sbjct: 636 VMYLRFVP-KSHLFFTAGKDRKIKQWD 661
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 282 GHSKAV--RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRT-FSTGKIPYVVKLNPDDD 338
GH V DIS+ DG T S D+N+K W + G ++ F+ ++ P
Sbjct: 589 GHKLPVICMDISY--DGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVP--- 643
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
K ++ D+KI QWD + E Q + H + + S V+SS DKSLR+WE
Sbjct: 644 KSHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 341
GH + + +SF DG F +AS+DK+IK WD ++G+ + F G + V ++ D +
Sbjct: 392 GHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFR-GHVGAVYQVCWSSDSR- 449
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
L++G D + WD+ TK++ +E H V T+ + R + S D+ LR+W
Sbjct: 450 YLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 117 (46.2 bits), Expect = 0.00096, P = 0.00096
Identities = 33/131 (25%), Positives = 61/131 (46%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C + GH++AV + +F DG F++ D ++ WD T T G +V+++
Sbjct: 131 RCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLK-GHTNWVLQVA 189
Query: 335 PDDDKQNILLAGMS-DKKIVQWDMNT-KEITQEYDQHLGAVNTITFVDSNR-----RFVT 387
D + I AGM D +I W T K++ H + +++ + R +
Sbjct: 190 WSPDSKKIATAGMEGDIRI--WCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLAS 247
Query: 388 SSDDKSLRVWE 398
SS D ++R+W+
Sbjct: 248 SSKDSTIRIWD 258
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 184 (69.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 56/238 (23%), Positives = 102/238 (42%)
Query: 295 DGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 353
D F++ S D +K WD G +R G V ++ D K +++G D ++
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGK---IVSGSDDLSVI 922
Query: 354 QWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHM 413
WD T ++ +E H V+ + + S R +T++ D ++++W+ + + +
Sbjct: 923 VWDKQTTQLLEELKGHDSQVSCVKML-SGERVLTAAHDGTVKMWDVRTDMCVATVGRCSS 981
Query: 414 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 473
++ S+ +T LAA D I+ R Q++K K GH + + D
Sbjct: 982 -AILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLK---GH--TKWIRSIRMVEDTL 1035
Query: 474 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
S D + W SC L CH G E+ P ++ + T DGL+++W+
Sbjct: 1036 ITGSDDWTARVWSVSRGSCDA--VLACHAGPVQSVEYSPFDKG-IITGSADGLLRFWE 1090
Score = 124 (48.7 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 38/166 (22%), Positives = 69/166 (41%)
Query: 276 CMRTYMGHSKAVRDISFCNDGTKFLTAS-YDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
C+ T S A+ + + +D T L A+ D WD +G+ + G ++ +
Sbjct: 972 CVATVGRCSSAILSLEY-DDSTGILAAAGRDTVANIWDIRSGKQMHKLK-GHTKWIRSIR 1029
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
+D L+ G D W ++ H G V ++ + ++ +T S D L
Sbjct: 1030 MVEDT---LITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLL 1086
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
R WE IK + +HS +S++ NWL + DN + ++
Sbjct: 1087 RFWE-NDEGGIKCVKNITLHSSSILSINAGENWLGIGAADNSMSLF 1131
Score = 47 (21.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 506 IGCEWHPLEQSKVATCGWDGLIKYWD 531
+ C LE+ ++ + G +G+++ WD
Sbjct: 1157 VRCVASDLERKRICSGGRNGVLRLWD 1182
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 56/248 (22%), Positives = 103/248 (41%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
D+S+ K T +R + F DG T + DK I+ WD T ++I+ +
Sbjct: 239 DESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQ 298
Query: 328 P-YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV 386
Y + PD D+ L++G D+ + WD+ T + + G V T+ +
Sbjct: 299 DIYSLDFFPDGDR---LVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIA 354
Query: 387 TSSDDKSLRVWEFGIPVVIKYISEP------HMHSMPSISLHPNTNWLAAQSLDNQILIY 440
S D+++RVW+ +++ + H S+ S++ N +A+ SLD + ++
Sbjct: 355 AGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Query: 441 STRERFQLNK--KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498
+ + + GH + V +PD +++SG + FWD S L
Sbjct: 415 HLEGKSDKKSTCEVTYIGH--KDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLML 472
Query: 499 KCHEGVCI 506
+ H I
Sbjct: 473 QGHRNSVI 480
Score = 158 (60.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 59/235 (25%), Positives = 106/235 (45%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVI--------------RTFSTGK 326
+ HS V + F DG KF+ +K + ++ TG+++ T ++G
Sbjct: 197 LDHSSVVCCVRFSRDG-KFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGD 255
Query: 327 IPYV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
+ Y+ V +PD +L G DK I WD++TK I + H + ++ F R
Sbjct: 256 L-YIRSVCFSPDG---KLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR 311
Query: 385 FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
V+ S D+S+R+W+ +S + ++++ P+ +AA SLD + ++ +
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIED--GVTTVAVSPDGKLIAAGSLDRTVRVWDSTT 369
Query: 445 RFQLNK----KKRFAGHIVAGYACQVNFSPDGRFVMSG--DGEGKCWFWDWKSCK 493
F + + + GH + Y+ V FS +G + SG D K W + KS K
Sbjct: 370 GFLVERLDSGNENGNGHEDSVYS--VAFSNNGEQIASGSLDRTVKLWHLEGKSDK 422
Score = 157 (60.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 50/231 (21%), Positives = 99/231 (42%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+ ++ GH + + + F DG + ++ S D++++ WD T Q T S V ++
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVS 347
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQ-------HLGAVNTITFVDSNRRFVT 387
PD ++ AG D+ + WD T + + D H +V ++ F ++ + +
Sbjct: 348 PDG---KLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIAS 404
Query: 388 SSDDKSLRVWEF-G-----IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 441
S D+++++W G + YI H + S+ P+ ++ + S D ++ +
Sbjct: 405 GSLDRTVKLWHLEGKSDKKSTCEVTYIG--HKDFVLSVCCTPDNEYILSGSKDRGVIFW- 461
Query: 442 TRERFQLNKKKRFAGH--IVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDW 489
++ N GH V A +N +G F +G G+ K W W
Sbjct: 462 --DQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFA-TGSGDCKARIWKW 509
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 56/248 (22%), Positives = 103/248 (41%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
D+S+ K T +R + F DG T + DK I+ WD T ++I+ +
Sbjct: 239 DESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQ 298
Query: 328 P-YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV 386
Y + PD D+ L++G D+ + WD+ T + + G V T+ +
Sbjct: 299 DIYSLDFFPDGDR---LVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIA 354
Query: 387 TSSDDKSLRVWEFGIPVVIKYISEP------HMHSMPSISLHPNTNWLAAQSLDNQILIY 440
S D+++RVW+ +++ + H S+ S++ N +A+ SLD + ++
Sbjct: 355 AGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Query: 441 STRERFQLNK--KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498
+ + + GH + V +PD +++SG + FWD S L
Sbjct: 415 HLEGKSDKKSTCEVTYIGH--KDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLML 472
Query: 499 KCHEGVCI 506
+ H I
Sbjct: 473 QGHRNSVI 480
Score = 158 (60.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 59/235 (25%), Positives = 106/235 (45%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVI--------------RTFSTGK 326
+ HS V + F DG KF+ +K + ++ TG+++ T ++G
Sbjct: 197 LDHSSVVCCVRFSRDG-KFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGD 255
Query: 327 IPYV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
+ Y+ V +PD +L G DK I WD++TK I + H + ++ F R
Sbjct: 256 L-YIRSVCFSPDG---KLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR 311
Query: 385 FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
V+ S D+S+R+W+ +S + ++++ P+ +AA SLD + ++ +
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIED--GVTTVAVSPDGKLIAAGSLDRTVRVWDSTT 369
Query: 445 RFQLNK----KKRFAGHIVAGYACQVNFSPDGRFVMSG--DGEGKCWFWDWKSCK 493
F + + + GH + Y+ V FS +G + SG D K W + KS K
Sbjct: 370 GFLVERLDSGNENGNGHEDSVYS--VAFSNNGEQIASGSLDRTVKLWHLEGKSDK 422
Score = 157 (60.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 50/231 (21%), Positives = 99/231 (42%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+ ++ GH + + + F DG + ++ S D++++ WD T Q T S V ++
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVS 347
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQ-------HLGAVNTITFVDSNRRFVT 387
PD ++ AG D+ + WD T + + D H +V ++ F ++ + +
Sbjct: 348 PDG---KLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIAS 404
Query: 388 SSDDKSLRVWEF-G-----IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 441
S D+++++W G + YI H + S+ P+ ++ + S D ++ +
Sbjct: 405 GSLDRTVKLWHLEGKSDKKSTCEVTYIG--HKDFVLSVCCTPDNEYILSGSKDRGVIFW- 461
Query: 442 TRERFQLNKKKRFAGH--IVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDW 489
++ N GH V A +N +G F +G G+ K W W
Sbjct: 462 --DQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFA-TGSGDCKARIWKW 509
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 174 (66.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 73/264 (27%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVIRTFST-GKIPYVVKL 333
T GHS V I+ L+AS DK+I W ET I S G +V +
Sbjct: 10 TLKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYI--SEPHMHSMPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY E H + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDVINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 67/272 (24%), Positives = 115/272 (42%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R+ GHS V D+ +DG L+ ++D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSADNRQIV-SGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKMVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG-KCWFWDWKSC------KVFRT-LK 499
L +G ++ C FSP+ ++ + G K W + K +V T K
Sbjct: 227 LYTLD--SGDVINAL-C---FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSK 280
Query: 500 CHEGVCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D LI+ W
Sbjct: 281 AEPPQCTSLAWSADGQTLFA--GYTDNLIRVW 310
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 63/268 (23%), Positives = 115/268 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G T GH+ V +S+ DGT+ T S DK ++ WD ETG+ + + G +V +
Sbjct: 185 GTPKHTLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGI 244
Query: 332 KLNPDD---DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-- 386
P D L++ D W +NT H G+V+ + + N V
Sbjct: 245 AWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVY 304
Query: 387 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL-DNQILIYSTRER 445
T+S DK+++VW+ + + + + H H + ++L +T+++ D+ + +T E
Sbjct: 305 TASHDKTVKVWD-AVKGTLLHDLKSHAHWVNHLAL--STDFVCRTGFFDHTKTVPATAEE 361
Query: 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS--CKVFRTLKCHEG 503
K+R+ A +V R V + D + + +D + K + H+
Sbjct: 362 KTAKAKERYEK------AARVGGKIVERLVSASD-DFTMYLFDPLNDGTKPIARMIGHQK 414
Query: 504 VCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+ P + S +A+ GWD K W+
Sbjct: 415 QVNHVTFSP-DGSMIASAGWDNATKLWN 441
Score = 128 (50.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/117 (23%), Positives = 55/117 (47%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQ 340
+GH K V ++F DG+ +A +D K W+ G+ I T G + V + + D +
Sbjct: 410 IGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLR-GHVAPVYQCSFSADSR 468
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
+L+ D + W++ T ++ + H V + + +R + DK++R+W
Sbjct: 469 -LLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 127 (49.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/150 (22%), Positives = 72/150 (48%)
Query: 384 RFVTSSDDKSLRVWE---FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
R V++SDD ++ +++ G + + I H + ++ P+ + +A+ DN ++
Sbjct: 383 RLVSASDDFTMYLFDPLNDGTKPIARMIG--HQKQVNHVTFSPDGSMIASAGWDNATKLW 440
Query: 441 STRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500
+ R+ +N + GH+ Y C +FS D R +++ + W+ ++ K+ L
Sbjct: 441 NARDGKFINTLR---GHVAPVYQC--SFSADSRLLVTASKDTTLKVWNVRTGKLATDLPG 495
Query: 501 HEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530
HE G +W P + +V + G D ++ W
Sbjct: 496 HEDEVYGVDWSP-DGQRVGSGGRDKAVRLW 524
Score = 99 (39.9 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 33/124 (26%), Positives = 50/124 (40%)
Query: 282 GHSKAVRDISFCN-DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQ 340
GH + + F + T S D + WD ETG T G +V+ ++ D
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLK-GHAGWVLGVSWSPDGT 208
Query: 341 NILLAGMSDKKIVQWDMNT-KEITQEYDQHLGAVNTITFV------DSNRRFVTSSDDKS 393
+ M DK + WD T K++ E H V I + D R V++S D +
Sbjct: 209 RLATCSM-DKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFT 267
Query: 394 LRVW 397
R+W
Sbjct: 268 ARIW 271
Score = 69 (29.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
L G D WD T H G V +++ R T S DK++R+W+
Sbjct: 168 LATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWD 223
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 176 (67.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 69/277 (24%), Positives = 114/277 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G RT GH+ +V+DISF G + S D IK WD + + IRT G V V
Sbjct: 140 GDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSV 198
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+ P+ D +++ DK + W++ T + + H V + + S+D
Sbjct: 199 AIMPNGDH---IVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSND 255
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNT---NWLAAQSLDNQ-------ILIYS 441
+++RVW + E H H + IS P + A +N+ L+
Sbjct: 256 QTVRVWVVATKECKAELRE-HEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSG 314
Query: 442 TRER----FQLNKKK---RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV 494
+R++ + ++ GH + V F P GRFV+S + WD+K+ +
Sbjct: 315 SRDKTIKMWDISTGMCLMTLVGH--DNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRC 372
Query: 495 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+TL HE ++H V T D +K W+
Sbjct: 373 MKTLSAHEHFVTSLDFHKASPY-VVTGSVDQTVKVWE 408
Score = 152 (58.6 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 63/266 (23%), Positives = 110/266 (41%)
Query: 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 341
GH V + F + ++AS D IK WD E G RT G V ++ D +
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLK-GHTDSVQDISFDQTGK- 163
Query: 342 ILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
LLA S D I WD E + H V+++ + + V++S DK++++WE
Sbjct: 164 -LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVA 222
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY--STRE-RFQLNKKKRF--- 454
+K + H + + + + LA+ S D + ++ +T+E + +L + +
Sbjct: 223 TGYCVKTFTG-HREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 455 ------AGHIVAGYACQVNFSPDGR---FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 505
+ H A G+ F++SG + WD + TL H+
Sbjct: 282 ISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWV 341
Query: 506 IGCEWHPLEQSKVATCGWDGLIKYWD 531
G +HP + V +C D ++ WD
Sbjct: 342 RGVLFHPGGRF-VVSCADDKTLRIWD 366
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 37/109 (33%), Positives = 58/109 (53%)
Query: 272 FHG-KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
F G +C+RT GH V ++ +G ++AS DK +K W+ TG ++TF TG +V
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTF-TGHREWV 237
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITF 378
+ P+ D LLA S+ + V+ W + TKE E +H V I++
Sbjct: 238 RMVRPNQD--GTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 29/101 (28%), Positives = 50/101 (49%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+G DK I WD++T H V + F R V+ +DDK+LR+W++
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
+K +S H H + S+ H + ++ S+D + ++ R
Sbjct: 371 RCMKTLSA-HEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 66/264 (25%), Positives = 112/264 (42%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T G+C R GH+++V + + DG + +AS D+ IK W G + RT G +V
Sbjct: 233 TTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWV 290
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT---QEYDQH-LGAVNTITFVDSNRRFV 386
+ D L G + + +N +++ QE + L N + R V
Sbjct: 291 NTMALSTDYA--LRTGAFEP--AEASVNPQDLQGSLQELKERALSRYNLVRG-QGPERLV 345
Query: 387 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERF 446
+ SDD +L +W H + + P++ +A+ S D I ++ R
Sbjct: 346 SGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 405
Query: 447 QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
L + GH+ A Y Q+ +S D R ++SG + WD K+ K+ L H
Sbjct: 406 YLASLR---GHVAAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVY 460
Query: 507 GCEWHPLEQSKVATCGWDGLIKYW 530
+W P + +VA+ G D ++ W
Sbjct: 461 AVDWSP-DGQRVASGGKDKCLRIW 483
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 67/273 (24%), Positives = 109/273 (39%)
Query: 268 DKSTFHGKCM-RTYMGHSKAVRDISF----CNDGTKFL-TASYDKNIKYWDTETGQVIRT 321
D ST GK + RT GHSK + +S+ N +++ ++S D +++ WDT G+ R
Sbjct: 184 DPST--GKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERI 241
Query: 322 FSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS 381
TG V L D +L + D+ I W + + + H VNT+
Sbjct: 242 L-TGHTQSVTCLRWGGD--GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 441
+ + V + ++ + E + S ++ L + S D + ++S
Sbjct: 299 YALRTGAFEPAEASVNPQDLQGSLQELKERAL-SRYNLVRGQGPERLVSGSDDFTLFLWS 357
Query: 442 TRERFQLNKKK--RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
E +KK R GH QV FSPD R V S + WD ++ K +L+
Sbjct: 358 PAE----DKKPLTRMTGH--QALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLR 411
Query: 500 CHEGVCIGCEWHPLEQSKVATCGW-DGLIKYWD 531
H W S++ G D +K WD
Sbjct: 412 GHVAAVYQIAWSA--DSRLLVSGSSDSTLKVWD 442
Score = 121 (47.7 bits), Expect = 0.00033, P = 0.00033
Identities = 40/171 (23%), Positives = 72/171 (42%)
Query: 363 TQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLH 422
T + H AV ++ F + + + S D ++R W+ + + H H + SIS
Sbjct: 107 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETP-HFTCKGHRHWVLSISWS 165
Query: 423 PNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI--VAGYACQ-VNFSPDGRFVMSGD 479
P+ LA+ + QIL++ Q+ + AGH + G + + ++ +P+ R+V S
Sbjct: 166 PDGRKLASGCKNGQILLWDPSTGKQVGRT--LAGHSKWITGLSWEPLHANPECRYVASSS 223
Query: 480 GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530
+G WD + + R L H W + + D IK W
Sbjct: 224 KDGSVRIWDTTAGRCERILTGHTQSVTCLRWGG--DGLLYSASQDRTIKVW 272
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 33/130 (25%), Positives = 66/130 (50%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C + GHS+AV ++F G + S D +++WD T + G +V+ ++
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST-ETPHFTCKGHRHWVLSIS 163
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNT-KEITQEYDQHLGAVNTITF--VDSNR--RFVTSS 389
D + L +G + +I+ WD +T K++ + H + +++ + +N R+V SS
Sbjct: 164 WSPDGRK-LASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASS 222
Query: 390 D-DKSLRVWE 398
D S+R+W+
Sbjct: 223 SKDGSVRIWD 232
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 66/265 (24%), Positives = 113/265 (42%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T G+C R GH+++V + + DG + +AS D+ IK W G + RT G +V
Sbjct: 233 TTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWV 290
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT---QEYDQHLGAVNTITFVDSN--RRF 385
+ D L G + + +N +++ QE + A++ V R
Sbjct: 291 NTMALSTDYA--LRTGAFEP--AEASVNAQDLRGSLQELKER--ALSRYNLVRGRGLERL 344
Query: 386 VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445
V+ SDD +L +W H + + P++ +A+ S D I ++ R
Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTG 404
Query: 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 505
L + GH+ A Y Q+ +S D R ++SG + WD K+ K+ L H
Sbjct: 405 KYLASLR---GHVAAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEV 459
Query: 506 IGCEWHPLEQSKVATCGWDGLIKYW 530
+W P + +VA+ G D ++ W
Sbjct: 460 YAVDWSP-DGQRVASGGKDKCLRIW 483
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 65/273 (23%), Positives = 108/273 (39%)
Query: 268 DKSTFHGKCM-RTYMGHSKAVRDISF----CNDGTKFL-TASYDKNIKYWDTETGQVIRT 321
D ST GK + R GHSK + +S+ N +++ ++S D +++ WDT G+ R
Sbjct: 184 DPST--GKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERI 241
Query: 322 FSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS 381
TG V L D +L + D+ I W + + + H VNT+
Sbjct: 242 L-TGHTQSVTCLRWGGD--GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298
Query: 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 441
+ + V + ++ + E + S ++ L + S D + ++S
Sbjct: 299 YALRTGAFEPAEASVNAQDLRGSLQELKERAL-SRYNLVRGRGLERLVSGSDDFTLFLWS 357
Query: 442 TRERFQLNKKK--RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
E +KK R GH QV FSPD R + S + WD ++ K +L+
Sbjct: 358 PAE----DKKPLARMTGH--QALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLR 411
Query: 500 CHEGVCIGCEWHPLEQSKVATCGW-DGLIKYWD 531
H W S++ G D +K WD
Sbjct: 412 GHVAAVYQIAWSA--DSRLLVSGSSDSTLKVWD 442
Score = 121 (47.7 bits), Expect = 0.00033, P = 0.00033
Identities = 36/132 (27%), Positives = 67/132 (50%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
+C + GHS+AV ++F G + S D +++WD T + G +V+ ++
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST-ETPHFTCQGHRHWVLSIS 163
Query: 335 --PDDDKQNILLAGMSDKKIVQWDMNT-KEITQEYDQHLGAVNTITF--VDSNR--RFVT 387
PD K L +G + +I+ WD +T K++ + H + +++ + +N R+V
Sbjct: 164 WSPDGKK---LASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVA 220
Query: 388 SSD-DKSLRVWE 398
SS D S+RVW+
Sbjct: 221 SSSKDGSVRVWD 232
>WB|WBGene00017435 [details] [associations]
symbol:F13H8.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:FO080709 RefSeq:NP_495256.1
ProteinModelPortal:Q19433 SMR:Q19433 DIP:DIP-25827N
MINT:MINT-1128581 STRING:Q19433 PaxDb:Q19433 EnsemblMetazoa:F13H8.2
GeneID:174038 KEGG:cel:CELE_F13H8.2 UCSC:F13H8.2 CTD:174038
WormBase:F13H8.2 InParanoid:Q19433 NextBio:882237 Uniprot:Q19433
Length = 929
Score = 181 (68.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 69/264 (26%), Positives = 117/264 (44%)
Query: 281 MGHSKAVRDISFCNDGTKFLTASYDKN-IKYWDTETGQVIRTFSTGKIPYVVKLN--PDD 337
+GH + VR + C + L AS N + W T + + T + I +V +N P D
Sbjct: 406 LGHREDVR--ALCVSSSSSLLASGGGNEVIVWSTHSLRSSLTLTDNDIKDIVAVNFVPGD 463
Query: 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW 397
N +L G + +I +++++ E+ + H GA+ TI N F+T+S DK++R W
Sbjct: 464 ---NYILTGGKNGEIGVFELSSAELVETRKAHTGAIWTIQNSPDNEGFITASADKTVRFW 520
Query: 398 EFGIPVVIKYISEPHMHSMPSISLH-PNTNWLAAQSLDNQILIYS----TRERFQLNKKK 452
F V++ S + L P+ A+ S D + L+ + T + +N K
Sbjct: 521 SF---VLVTEGSRKRISIKEQKVLELPDEALAASFSADGKFLVVALLNNTCSVYFVNTLK 577
Query: 453 RFA---GHIVAGYACQVNFSPDGRFVMSG--DGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
F GH + C V+ +P + ++G D K W D+ C ++ H+
Sbjct: 578 FFVSLYGHSLP-VTC-VDIAPSSKLCVTGSVDKSVKVWGLDFGDCH--KSFHAHDDAVTS 633
Query: 508 CEWHPLEQSKVATCGWDGLIKYWD 531
+ P E+ + G DG IK WD
Sbjct: 634 VLFCPGEEQLFWSAGKDGKIKQWD 657
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 182 (69.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDK 339
+ GH + + + F +G + S DK ++ WD G+++ T S V ++PD
Sbjct: 354 FSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDGVTTVAMSPDG-- 411
Query: 340 QNILLAGMSDKKIVQWDMNTKEITQEY---DQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396
+ AG DK + WD T + + D H +V ++ F + + V+ S DK++++
Sbjct: 412 -LYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKL 470
Query: 397 WEFGIPVVIKYIS-----------EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445
WE +P +Y S E H + S+ L P+ +W+ + S D + + +
Sbjct: 471 WELNLPRQ-QYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFW---DP 526
Query: 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 491
N + GH V SP G +G G+ + W + +
Sbjct: 527 ITGNAQMMLQGH--KNSVISVAPSPTGNLFATGSGDMRARIWRYSA 570
Score = 178 (67.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 52/216 (24%), Positives = 105/216 (48%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ---VIRTFSTGKIP--YV--VK 332
++ H V + F DG K+L +++ + +D GQ V++ S K Y+ V
Sbjct: 265 HLVHDSVVCCVRFSRDG-KYLATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVC 323
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
+PD L G DK+I WD+ T+ I + H + ++ F + R + S DK
Sbjct: 324 FSPDG---KYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDK 380
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
++R+W+ ++ +S + ++++ P+ ++AA SLD + ++ T + + + +
Sbjct: 381 TVRLWDIAEGKLVYTLSIED--GVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLE 438
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488
GH + Y+ V F+P+G+ ++SG + W+
Sbjct: 439 NPDGHKDSVYS--VAFAPNGKELVSGSLDKTIKLWE 472
Score = 39 (18.8 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 6 VWDFSLKLGMDLLQNYADEKEGDL 29
++D +L + +LQ+ + +K GDL
Sbjct: 294 IFDVTLGQNVAVLQDESVDKSGDL 317
>FB|FBgn0264691 [details] [associations]
symbol:Lst8 species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0031929 "TOR
signaling cascade" evidence=IPI] [GO:0045793 "positive regulation
of cell size" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031929 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045793
KO:K08266 GeneTree:ENSGT00390000014795 OMA:NNKGNCY EMBL:AY061311
RefSeq:NP_572572.1 UniGene:Dm.12479 ProteinModelPortal:Q9W328
SMR:Q9W328 IntAct:Q9W328 MINT:MINT-888627 STRING:Q9W328
PaxDb:Q9W328 EnsemblMetazoa:FBtr0071368 GeneID:31903
KEGG:dme:Dmel_CG3004 UCSC:CG3004-RA FlyBase:FBgn0030142
InParanoid:Q9W328 OrthoDB:EOG473N6W PhylomeDB:Q9W328
GenomeRNAi:31903 NextBio:775850 Bgee:Q9W328 Uniprot:Q9W328
Length = 313
Score = 172 (65.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 53/238 (22%), Positives = 95/238 (39%)
Query: 301 TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK 360
T YD IK W TG I+T + V L+ DK + G ++ + N
Sbjct: 11 TGGYDHTIKVWQAHTGNCIKTMRFVETSQVNALDRTPDKTRLAACGYQCIRLYDLESNCT 70
Query: 361 EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF-GIPVVIKYISEPHMHSMPSI 419
+D V + F + T+ +D +R+W+ P I + + +
Sbjct: 71 APVINFDGVQKNVTRLGFQEDGNWMFTAGEDHHVRIWDMIAAPPHCSRIFDCEA-PVNAA 129
Query: 420 SLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD 479
LHPN +A S + + ++ + + +R + A V SPDGR++ + +
Sbjct: 130 CLHPNQVEIAMGSQNGSVFLWDVKSE----RHERIVPEVDASIQ-DVAISPDGRYLAAAN 184
Query: 480 GEGKCWFW-----DWK--SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530
+G C+ W D K + + R + H + C++ P + + T G DG + W
Sbjct: 185 NKGNCYIWSLTSQDQKMSTLRPNRKIPAHSRYILRCKFSPDSRLLLTTSG-DGTVCIW 241
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 58/267 (21%), Positives = 103/267 (38%)
Query: 274 GKCMRTY-MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTE---TGQVIRTFSTGKIPY 329
G C++T + V + D T+ Y + I+ +D E T VI F G
Sbjct: 26 GNCIKTMRFVETSQVNALDRTPDKTRLAACGY-QCIRLYDLESNCTAPVIN-FD-GVQKN 82
Query: 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDSNRRFVT 387
V +L +D + AG D + WDM ++ +D VN +
Sbjct: 83 VTRLGFQEDGNWMFTAG-EDHHVRIWDMIAAPPHCSRIFDCE-APVNAACLHPNQVEIAM 140
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
S + S+ +W+ + + E S+ +++ P+ +LAA + I+S + Q
Sbjct: 141 GSQNGSVFLWDVKSERHERIVPEVDA-SIQDVAISPDGRYLAAANNKGNCYIWSLTSQDQ 199
Query: 448 ----LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L ++ H + Y + FSPD R +++ G+G W +R L C E
Sbjct: 200 KMSTLRPNRKIPAH--SRYILRCKFSPDSRLLLTTSGDGTVCIWKTDDFSKWREL-CIEN 256
Query: 504 VCIGCEWHPLEQSKVATCGWDGLIKYW 530
+ + + T DG+ + W
Sbjct: 257 YWVWDAAFSADSKWLFTASSDGIARLW 283
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 176 (67.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 63/263 (23%), Positives = 111/263 (42%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T G+C R GH+++V + + DG + +AS D+ IK W G + RT G +V
Sbjct: 233 TTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWV 290
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT---QEYDQHLGAVNTITFVDSNRRFVT 387
+ D L G + + +N +++ +E + + + R V+
Sbjct: 291 NTMALSTDYA--LRTGAFEP--AEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVS 346
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
SDD +L +W H + + P++ +A+ S D I ++ R
Sbjct: 347 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKY 406
Query: 448 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
L + GH+ A Y Q+ +S D R ++SG + WD K+ K+ L H
Sbjct: 407 LASLR---GHVAAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYA 461
Query: 508 CEWHPLEQSKVATCGWDGLIKYW 530
+W P + +VA+ G D ++ W
Sbjct: 462 VDWSP-DGQRVASGGKDKCLRIW 483
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 63/262 (24%), Positives = 102/262 (38%)
Query: 278 RTYMGHSKAVRDISF----CNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
RT GHSK + +S+ N +++ ++S D +++ WDT G+ R TG V
Sbjct: 193 RTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERIL-TGHTQSVTC 251
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
L D +L + D+ I W + + + H VNT+ + +
Sbjct: 252 LRWGGD--GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPA 309
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
V + +K + E S ++ L + S D + ++S E +KK
Sbjct: 310 EATVNAQDLQGSLKELKE-RASSRYNLVRGQGPERLVSGSDDFTLFLWSPAE----DKKP 364
Query: 453 --RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
R GH QV FSPD R V S + WD ++ K +L+ H W
Sbjct: 365 LARMTGH--QALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAW 422
Query: 511 HPLEQSKVATCGW-DGLIKYWD 531
S++ G D +K WD
Sbjct: 423 SA--DSRLLVSGSSDSTLKVWD 442
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 38/171 (22%), Positives = 71/171 (41%)
Query: 363 TQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLH 422
T + H AV ++ F + + + S D ++R W+ + + H H + SIS
Sbjct: 107 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETP-HFTCKGHRHWVLSISWS 165
Query: 423 PNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI--VAGYACQ-VNFSPDGRFVMSGD 479
P+ LA+ + Q+L++ Q+ + GH + G + + ++ +P+ R+V S
Sbjct: 166 PDGKKLASGCKNGQVLLWDPSTGLQVGRT--LTGHSKWITGLSWEPLHMNPECRYVASSS 223
Query: 480 GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530
+G WD + + R L H W + + D IK W
Sbjct: 224 KDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG--DGLLYSASQDRTIKVW 272
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 174 (66.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 51/222 (22%), Positives = 101/222 (45%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KIPYVVKLNPDDD 338
++ HS V+ + F ++ LTA + N++ W+ +T +++ K K
Sbjct: 103 FVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFI---H 159
Query: 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398
++N + D++I +D T + E+ H + ++T + +++SDD+ +RVW+
Sbjct: 160 RKNWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWD 219
Query: 399 FGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 457
+ ++ + H H + I+++P + + SLD + ++ E+ + + GH
Sbjct: 220 WENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLE---GH 276
Query: 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499
G C V F GR V D C WD ++ K TLK
Sbjct: 277 -EKGVNC-VEFLTGGRIVSGSDDCSIC-VWDIQTQKCIETLK 315
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 44/189 (23%), Positives = 89/189 (47%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327
D TF + + HS +R ++ ++AS D+ I+ WD E +
Sbjct: 177 DAETF--SLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWRMEQEFQEHA 234
Query: 328 PYVVKL--NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385
Y++++ NP+D + + ++G DK + W + +E + H VN + F+ R
Sbjct: 235 HYIMQIAVNPEDPE--MFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFLTGGR-I 291
Query: 386 VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445
V+ SDD S+ VW+ I+ + H +++ ++ P W+ + + D+ + I+++ +
Sbjct: 292 VSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVT--PFKTWIISGAEDSTVKIWNS-QT 348
Query: 446 FQLNKKKRF 454
F L K+ F
Sbjct: 349 FSLEKELNF 357
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 176 (67.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 63/263 (23%), Positives = 111/263 (42%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T G+C R GH+++V + + DG + +AS D+ IK W G + RT G +V
Sbjct: 235 TTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWV 292
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT---QEYDQHLGAVNTITFVDSNRRFVT 387
+ D L G + + +N +++ +E + + + R V+
Sbjct: 293 NTMALSTDYA--LRTGAFEP--AEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVS 348
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
SDD +L +W H + + P++ +A+ S D I ++ R
Sbjct: 349 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKY 408
Query: 448 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507
L + GH+ A Y Q+ +S D R ++SG + WD K+ K+ L H
Sbjct: 409 LASLR---GHVAAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYA 463
Query: 508 CEWHPLEQSKVATCGWDGLIKYW 530
+W P + +VA+ G D ++ W
Sbjct: 464 VDWSP-DGQRVASGGKDKCLRIW 485
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 63/262 (24%), Positives = 102/262 (38%)
Query: 278 RTYMGHSKAVRDISF----CNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332
RT GHSK + +S+ N +++ ++S D +++ WDT G+ R TG V
Sbjct: 195 RTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERIL-TGHTQSVTC 253
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
L D +L + D+ I W + + + H VNT+ + +
Sbjct: 254 LRWGGD--GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPA 311
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
V + +K + E S ++ L + S D + ++S E +KK
Sbjct: 312 EATVNAQDLQGSLKELKE-RASSRYNLVRGQGPERLVSGSDDFTLFLWSPAE----DKKP 366
Query: 453 --RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510
R GH QV FSPD R V S + WD ++ K +L+ H W
Sbjct: 367 LARMTGH--QALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAW 424
Query: 511 HPLEQSKVATCGW-DGLIKYWD 531
S++ G D +K WD
Sbjct: 425 SA--DSRLLVSGSSDSTLKVWD 444
Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
Identities = 39/171 (22%), Positives = 71/171 (41%)
Query: 363 TQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLH 422
T + H AV ++ F + + + S D ++R W+ + + H H + SIS
Sbjct: 109 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETP-HFTCKGHRHWVLSISWS 167
Query: 423 PNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI--VAGYACQ-VNFSPDGRFVMSGD 479
P+ LA+ + QIL++ Q+ + GH + G + + ++ +P+ R+V S
Sbjct: 168 PDGKKLASGCKNGQILLWDPSTGTQVGRT--LTGHSKWITGLSWEPLHMNPECRYVASSS 225
Query: 480 GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530
+G WD + + R L H W + + D IK W
Sbjct: 226 KDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG--DGLLYSASQDRTIKVW 274
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 173 (66.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 53/207 (25%), Positives = 89/207 (42%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDKQN 341
H+ + SF N + LTAS D WD E+GQ++++F G + L P + N
Sbjct: 152 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG-N 210
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
++G DKK + WDM + + Q ++ H VN++ + S F + SDD + R+++
Sbjct: 211 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA 270
Query: 402 P-VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
V Y E + S+ + L A D I ++ + +++ GH
Sbjct: 271 DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSI---LFGH--E 325
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFW 487
+ SPDG SG + W
Sbjct: 326 NRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 180 (68.4 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 75/271 (27%), Positives = 117/271 (43%)
Query: 266 VEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG 325
V D + + +C++T GH V I + ND F + S D +IK WD + + I T
Sbjct: 484 VYDYKSQNMECVQTLKGHEGPVESICY-NDQYLF-SGSSDHSIKVWDLKKLRCIFTLEGH 541
Query: 326 KIP-YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384
P + V LN DK L +G SDK I WD+ T E + H AV T+ S +
Sbjct: 542 DKPVHTVLLN---DKY--LFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCI--SGQY 594
Query: 385 FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
+ S+DK+++VW+ Y + H + +I + TN L + S D I +++ +
Sbjct: 595 LFSGSNDKTIKVWDLKT-FRCNYTLKGHTKWVTTICIL-GTN-LYSGSYDKTIRVWNLKS 651
Query: 445 ---RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 501
L R+ H+V C F S D K WD ++ + TL+ H
Sbjct: 652 LECSATLRGHDRWVEHMVI---CDKLL-----FTASDDNTIK--IWDLETLRCNTTLEGH 701
Query: 502 EGV--CIGCEWHPLEQSKVATCGWDGLIKYW 530
C+ W ++ V +C D I+ W
Sbjct: 702 NATVQCLAV-WE--DKKCVISCSHDQSIRVW 729
Score = 44 (20.5 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 12/54 (22%), Positives = 20/54 (37%)
Query: 123 NHKLGFVEDASIDSFVFDEQYNTFYKYGYAADPAGNNYVGDFEALEKNNGVSVY 176
NH+L ++ + D Q +T+ G+ G F K N + Y
Sbjct: 269 NHQLLIIDIQGVGDHYTDPQIHTYDGVGFGIGNLGQKGFEKFLDTHKCNAICQY 322
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 66/254 (25%), Positives = 105/254 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVV 331
GK + GH VR + + DK +K WD E +VIR + G + Y +
Sbjct: 235 GKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYH-GHLSAVYGL 293
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
L+P D +L+ D WD+ TK H AV T+ + + +T S D
Sbjct: 294 DLHPTID---VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHD 350
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
++R+W+ + + H S+ ++ LHP A+ S DN I + + +
Sbjct: 351 TTIRLWDL-VAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFI--- 405
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWH 511
+ +GH VN DG V SG G WDW++ F+ + H V G
Sbjct: 406 QNLSGHNAIINTLTVN--SDGVLV-SGADNGTMHLWDWRTGYNFQ--RVHAAVQPGS--- 457
Query: 512 PLE-QSKVATCGWD 524
L+ +S + C +D
Sbjct: 458 -LDSESGIFACAFD 470
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/188 (23%), Positives = 78/188 (41%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
K R GH VR I+ F+T S D+ IK WD +G+ ++ TG I V +
Sbjct: 194 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGK-LKLSLTGHISTVRGVI 252
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
+ G DK++ WD+ ++ + Y HL AV + + VT S D +
Sbjct: 253 VSTRSPYLFSCG-EDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 311
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST---RERFQLNKK 451
R+W+ + +S H +++ ++ + S D I ++ + R L
Sbjct: 312 RIWDVRTKASVHTLSG-HTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 370
Query: 452 KRFAGHIV 459
K+ +V
Sbjct: 371 KKSVRAVV 378
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 176 (67.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 66/254 (25%), Positives = 105/254 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVV 331
GK + GH VR + + DK +K WD E +VIR + G + Y +
Sbjct: 236 GKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYH-GHLSAVYGL 294
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
L+P D +L+ D WD+ TK H AV T+ + + +T S D
Sbjct: 295 DLHPTID---VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHD 351
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
++R+W+ + + H S+ ++ LHP A+ S DN I + + +
Sbjct: 352 TTIRLWDL-VAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFI--- 406
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWH 511
+ +GH VN DG V SG G WDW++ F+ + H V G
Sbjct: 407 QNLSGHNAIINTLTVN--SDGVLV-SGADNGTMHLWDWRTGYNFQ--RVHAAVQPGS--- 458
Query: 512 PLE-QSKVATCGWD 524
L+ +S + C +D
Sbjct: 459 -LDSESGIFACAFD 471
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/188 (23%), Positives = 78/188 (41%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
K R GH VR I+ F+T S D+ IK WD +G+ ++ TG I V +
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGK-LKLSLTGHISTVRGVI 253
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
+ G DK++ WD+ ++ + Y HL AV + + VT S D +
Sbjct: 254 VSTRSPYLFSCG-EDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 312
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST---RERFQLNKK 451
R+W+ + +S H +++ ++ + S D I ++ + R L
Sbjct: 313 RIWDVRTKASVHTLSG-HTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 371
Query: 452 KRFAGHIV 459
K+ +V
Sbjct: 372 KKSVRAVV 379
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 176 (67.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 66/254 (25%), Positives = 105/254 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVV 331
GK + GH VR + + DK +K WD E +VIR + G + Y +
Sbjct: 237 GKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYH-GHLSAVYGL 295
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
L+P D +L+ D WD+ TK H AV T+ + + +T S D
Sbjct: 296 DLHPTID---VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHD 352
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
++R+W+ + + H S+ ++ LHP A+ S DN I + + +
Sbjct: 353 TTIRLWDL-VAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFI--- 407
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWH 511
+ +GH VN DG V SG G WDW++ F+ + H V G
Sbjct: 408 QNLSGHNAIINTLTVN--SDGVLV-SGADNGTMHLWDWRTGYNFQ--RVHAAVQPGS--- 459
Query: 512 PLE-QSKVATCGWD 524
L+ +S + C +D
Sbjct: 460 -LDSESGIFACAFD 472
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 54/253 (21%), Positives = 93/253 (36%)
Query: 212 PATDTWLMKNRKSPWAGKKEGVQTELSXXXXXXXXXXXXXXXXXXXXXXXXXXHVEDKST 271
P++ T + NR +P G+ T K
Sbjct: 131 PSSQTRVDANRSAPAGGEYRHPGTSDRSQPAGMTSAVMEAGNAKNSALMAKKAPTMPKPQ 190
Query: 272 FHG--KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY 329
+H K R GH VR I+ F+T S D+ IK WD +G+ ++ TG I
Sbjct: 191 WHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGK-LKLSLTGHIST 249
Query: 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
V + + G DK++ WD+ ++ + Y HL AV + + VT S
Sbjct: 250 VRGVIVSTRSPYLFSCG-EDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCS 308
Query: 390 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST---RERF 446
D + R+W+ + +S H +++ ++ + S D I ++ + R
Sbjct: 309 RDSTARIWDVRTKASVHTLSG-HTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRV 367
Query: 447 QLNKKKRFAGHIV 459
L K+ +V
Sbjct: 368 TLTNHKKSVRAVV 380
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 180 (68.4 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 58/234 (24%), Positives = 106/234 (45%)
Query: 300 LTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT 359
L + YD N+ W+ ET ++++F V+ K+ ++ G D I ++ NT
Sbjct: 31 LASLYDGNVYIWNYETQNMVKSFEVSP-NNPVRTARFIAKKQWIVTGSDDTYIRVYNYNT 89
Query: 360 KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI 419
E + ++ H + I + ++SSDD +++W++ + E H H + SI
Sbjct: 90 MEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSI 149
Query: 420 SLHP-NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR-FVMS 477
+ +P +TN A SLD + ++S + GH G FS + +++S
Sbjct: 150 AWNPKDTNQFATASLDKTVKVWSINSP---HPHFTLEGH-EKGINSVEYFSGGEKPYLIS 205
Query: 478 GDGEGKCWFWDWKSCKVFRTLKCHEG-VCIGCEWHPLEQSKVATCGWDGLIKYW 530
G + WD++S +TL+ H V + C +HP E + + DG +K W
Sbjct: 206 GADDKLVKIWDYQSKTCVQTLEGHSNNVSVVC-YHP-ELPLILSGSEDGTVKLW 257
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 43/210 (20%), Positives = 92/210 (43%)
Query: 277 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL--N 334
++++ H+ +R I L++S D IK WD E G G YV+ + N
Sbjct: 93 IKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWN 152
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR--FVTSSDDK 392
P D Q A + DK + W +N+ + H +N++ + + ++ +DDK
Sbjct: 153 PKDTNQ-FATASL-DKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDK 210
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452
+++W++ ++ + E H +++ + HP + + S D + ++ + ++L +
Sbjct: 211 LVKIWDYQSKTCVQTL-EGHSNNVSVVCYHPELPLILSGSEDGTVKLWHS-STYRLERTL 268
Query: 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEG 482
+ G+ +NF F+ G +G
Sbjct: 269 NYG----MGFVWSMNFLRGSNFIGLGYDDG 294
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/264 (26%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 65/268 (24%), Positives = 109/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 227 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 285 QCTSLAWSADGQTLFA--GYTDNLVRVW 310
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/264 (26%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 65/268 (24%), Positives = 109/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 227 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 285 QCTSLAWSADGQTLFA--GYTDNLVRVW 310
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/264 (26%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 65/268 (24%), Positives = 109/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 227 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 285 QCTSLAWSADGQTLFA--GYTDNLVRVW 310
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/264 (26%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 65/268 (24%), Positives = 109/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 227 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 285 QCTSLAWSADGQTLFA--GYTDNLVRVW 310
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/264 (26%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 65/268 (24%), Positives = 109/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 227 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 285 QCTSLAWSADGQTLFA--GYTDNLVRVW 310
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/264 (26%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 65/268 (24%), Positives = 109/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 227 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 285 QCTSLAWSADGQTLFA--GYTDNLVRVW 310
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/264 (26%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 65/268 (24%), Positives = 109/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 227 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 285 QCTSLAWSADGQTLFA--GYTDNLVRVW 310
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/264 (26%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 65/268 (24%), Positives = 109/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 227 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 285 QCTSLAWSADGQTLFA--GYTDNLVRVW 310
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/264 (26%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 65/268 (24%), Positives = 109/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 227 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 285 QCTSLAWSADGQTLFA--GYTDNLVRVW 310
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/264 (26%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 65/268 (24%), Positives = 109/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 227 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 285 QCTSLAWSADGQTLFA--GYTDNLVRVW 310
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 70/264 (26%), Positives = 109/264 (41%)
Query: 279 TYMGHSKAVRDISFCNDGTK-FLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V +S + + FL+ DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLAN---C 182
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
Score = 161 (61.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 65/268 (24%), Positives = 108/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 108
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 109 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK + VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 168 CGWDKLVNVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 227 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 285 QCTSLAWSADGQTLFA--GYTDNLVRVW 310
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 65/277 (23%), Positives = 118/277 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G RT GH+ +V+DISF + G + S D IK WD + + IRT G V V
Sbjct: 75 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSV 133
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+ P+ D +++ DK I W++ T + + H V + + S+D
Sbjct: 134 AIMPNGDH---IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 190
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA-AQSLDNQ---------ILIYS 441
+++RVW + E H H + IS P +++ + +++ ++ L+
Sbjct: 191 QTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 249
Query: 442 TRER----FQLNKKK---RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV 494
+R++ + ++ GH + V F G+F++S + WD+K+ +
Sbjct: 250 SRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 307
Query: 495 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+TL HE ++H V T D +K W+
Sbjct: 308 MKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWE 343
Score = 154 (59.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 272 FHG-KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
F G +C+RT GH V ++ +G ++AS DK IK W+ +TG ++TF TG +V
Sbjct: 114 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWV 172
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITF 378
+ P+ D L+A S+ + V+ W + TKE E +H V I++
Sbjct: 173 RMVRPNQD--GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 219
Score = 144 (55.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 42/174 (24%), Positives = 78/174 (44%)
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
+++++ D I WD T + + H +V I+F S + + S D ++++W+F
Sbjct: 56 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 115
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
I+ + H H++ S+++ PN + + + S D I ++ + + + K F GH
Sbjct: 116 GFECIRTM-HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGH--R 169
Query: 461 GYACQVNFSPDGRFVMS--GDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
+ V + DG + S D + W K CK L+ HE V W P
Sbjct: 170 EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA--ELREHEHVVECISWAP 221
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+G DK I WD++T H V + F + ++ +DDK+LRVW++
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
+K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 306 RCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 171 (65.3 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 71/264 (26%), Positives = 108/264 (40%)
Query: 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 333
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 13 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 72
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
D Q L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK+
Sbjct: 73 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 131
Query: 394 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 448
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 132 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 185
Query: 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 186 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 243
Query: 509 EWHPLEQSKVATCGWDG-LIKYWD 531
+ P ++ C G IK WD
Sbjct: 244 -FSP---NRYWLCAATGPSIKIWD 263
Score = 163 (62.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 65/268 (24%), Positives = 109/268 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 53 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 111
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 112 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 170
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 447
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 171 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 229
Query: 448 LNKKKRFAGHIVAGYACQVN----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503
L G I+ N + G + D EGK + K + + K
Sbjct: 230 LYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 287
Query: 504 VCIGCEWHPLEQSKVATCGW-DGLIKYW 530
C W Q+ A G+ D L++ W
Sbjct: 288 QCTSLAWSADGQTLFA--GYTDNLVRVW 313
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 179 (68.1 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 71/242 (29%), Positives = 110/242 (45%)
Query: 268 DKSTFHGKCMRTYMGHSKAVRDI-SFC--NDGTKFLTASYDKNIKYWDT-ETGQVIRTFS 323
D+S F K T + + VR + S C D + + S D I WD E V +
Sbjct: 491 DRSEFE-KWDLTSIKNIDTVRGLQSECITGDSLRLYSGSNDGQIGVWDAVELKHVTNIKA 549
Query: 324 TGK-IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN 382
GK I V+K P D QNIL AG +D + +WD+NT++ +E + VNTI F+ N
Sbjct: 550 HGKSIRAVIK-RPGFD-QNILTAG-ADSLVKEWDINTQQTIKEIKES-NEVNTI-FIQDN 604
Query: 383 RRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442
+ T +DK+++VW+ +K +S H ++ S+ N L + S D QI +++
Sbjct: 605 LLY-TGCNDKTVKVWDMRSYECVKTLSG-HTRAIKSVCAMGNL--LFSGSNDQQIYVWNL 660
Query: 443 RERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE 502
L F GH G+ + SG + WD K+ + T+KC +
Sbjct: 661 ATGTILTN---FQGH--EGWV--KTLYAHNNMLYSGSHDETIRIWDLKTTRCVNTIKCKD 713
Query: 503 GV 504
V
Sbjct: 714 RV 715
Score = 45 (20.9 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 14/53 (26%), Positives = 21/53 (39%)
Query: 121 MRNHKLGFVEDASIDSFVFDEQYNTFYKYGYAADPAGNNYVGDFEALEKNNGV 173
+ NH+L V+ ++ F D Q +T G+ G F K N V
Sbjct: 182 LSNHELLIVDIQGVNDFYTDPQIHTKSGEGFGEGNLGETGFHKFLQTHKCNPV 234
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 180 (68.4 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 43/175 (24%), Positives = 89/175 (50%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST-GKIPY-VV 331
G C+ T+ H+ AV + F G ++S D +++ WD + RTF+ ++ + +
Sbjct: 371 GFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCI 430
Query: 332 KLNPDDDKQNILLAGMSDK-KIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390
++P + I+ AG D +I W + T ++ + H G V++++F S + S
Sbjct: 431 AVDPSGE---IVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSW 487
Query: 391 DKSLRVWE-FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
DK++R+W+ F +++ + P + S++ HP+ + SLD Q+ ++ +E
Sbjct: 488 DKTVRIWDIFSRSGIVEPLPIPS--DVLSLAFHPDGKEVCVASLDGQLTFWNVQE 540
Score = 150 (57.9 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 35/182 (19%), Positives = 80/182 (43%)
Query: 351 KIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISE 410
+++ W+ ++ + H A++T+ + +R +T +DD ++VW+ I ++
Sbjct: 320 QLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQ 379
Query: 411 PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP 470
H ++ + N L + SLD + + + + + F ++C + P
Sbjct: 380 -HTSAVSGLCFSKRGNVLFSSSLDGSVRAW---DLIRYRNFRTFTAPSRVQFSC-IAVDP 434
Query: 471 DGRFVMSGDGEG-KCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 529
G V +G + + + W ++ ++ TL HEG ++ S +A+ WD ++
Sbjct: 435 SGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNS-SGSLLASGSWDKTVRI 493
Query: 530 WD 531
WD
Sbjct: 494 WD 495
Score = 145 (56.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 51/201 (25%), Positives = 85/201 (42%)
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK 392
L D Q I+ G D KI WDMN+ + QH AV+ + F +SS D
Sbjct: 345 LQYSSDGQRII-TGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDG 403
Query: 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN-QILIYSTRERFQLNKK 451
S+R W+ + + P I++ P+ + A S D+ +I ++S + QL
Sbjct: 404 SVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTG-QL--L 460
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD-WKSCKVFRTLKCHEGVCIGCEW 510
+ AGH G ++F+ G + SG + WD + + L V + +
Sbjct: 461 ETLAGH--EGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDV-LSLAF 517
Query: 511 HPLEQSKVATCGWDGLIKYWD 531
HP + +V DG + +W+
Sbjct: 518 HP-DGKEVCVASLDGQLTFWN 537
Score = 46 (21.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS 323
Y V I F +G KF S K I+ W T R F+
Sbjct: 92 YFNFKSPVGAIEFSPNG-KFFAVSLGKLIQVWRTPNSLEEREFA 134
Score = 45 (20.9 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 199 GTAVDVDPAEFNNPATDTWLMKNR 222
G +D + AE N T WL+K R
Sbjct: 226 GEVID-EEAEENKTRTHIWLIKER 248
Score = 44 (20.5 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 278 RTYMGHSKAVRDISFCNDGTKFLTASYD 305
R Y GH + IS+ D F++ S D
Sbjct: 140 REYTGHFDDIVSISWSADSRFFISTSKD 167
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 170 (64.9 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 62/258 (24%), Positives = 109/258 (42%)
Query: 277 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK---L 333
+R Y H V +F DG LTAS D + W T++G+++ + + P VK
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGP--VKSCCF 76
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS 393
+PD ++ + SD I WD+ + H +V T++F +++ + DK
Sbjct: 77 SPDG---RLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKR 133
Query: 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR 453
VWE + ++ H S+ S P ++ LA S D+ + I+ R +
Sbjct: 134 AIVWEVQSGRRV-HLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHN 192
Query: 454 FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPL 513
GH +C + +S G + SG + W + + LK H + P
Sbjct: 193 LEGH-TGNISC-LCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSP- 248
Query: 514 EQSKVATCGWDGLIKYWD 531
++ K+A+ G+ +K WD
Sbjct: 249 DELKLASAGYSRTVKVWD 266
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 59/246 (23%), Positives = 99/246 (40%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY- 329
T G+ + GH V+ F DG ++S D +I+ WD + + +
Sbjct: 55 TKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVE 114
Query: 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS 389
V +PD KQ L +G DK+ + W++ + H ++ + F ++ T S
Sbjct: 115 TVSFSPDS-KQ--LASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGS 171
Query: 390 DDKSLRVWEF--GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS-TRERF 446
D ++ +W+ PVV + E H ++ S + + LA+ S D I ++ T
Sbjct: 172 WDSTVHIWDLRASTPVVSYHNLEGHTGNI-SCLCYSASGLLASGSWDKTICVWKPTTNNL 230
Query: 447 QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506
L K GH + + + FSPD + S WD + K TLK V
Sbjct: 231 PLQLK----GHTI--WVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAH 284
Query: 507 GCEWHP 512
C + P
Sbjct: 285 ACIFTP 290
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 47/212 (22%), Positives = 89/212 (41%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-- 332
KC+ GH ++V +SF D + + +DK W+ ++G+ + G +
Sbjct: 101 KCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLL-VGHCDSIQSSD 159
Query: 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY---DQHLGAVNTITFVDSNRRFVTSS 389
+P D L G D + WD+ Y + H G ++ + + S + S
Sbjct: 160 FSPTSDS---LATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGL-LASGS 215
Query: 390 DDKSLRVWE---FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERF 446
DK++ VW+ +P+ +K H + S++ P+ LA+ + ++
Sbjct: 216 WDKTICVWKPTTNNLPLQLK----GHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGK 271
Query: 447 QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG 478
L K G + +AC F+PDG+ ++SG
Sbjct: 272 CLETLK---GMLDVAHACI--FTPDGKLLVSG 298
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 172 (65.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 52/207 (25%), Positives = 89/207 (42%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDKQN 341
H+ + SF N + LTAS D WD E+GQ++++F G + L P + N
Sbjct: 152 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG-N 210
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
++G DKK + WDM + + Q ++ H +N++ + S F + SDD + R+++
Sbjct: 211 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRA 270
Query: 402 P-VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
V Y E + S+ + L A D I ++ + +++ GH
Sbjct: 271 DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSI---LFGH--E 325
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFW 487
+ SPDG SG + W
Sbjct: 326 NRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 172 (65.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 52/207 (25%), Positives = 89/207 (42%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDKQN 341
H+ + SF N + LTAS D WD E+GQ++++F G + L P + N
Sbjct: 152 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG-N 210
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
++G DKK + WDM + + Q ++ H +N++ + S F + SDD + R+++
Sbjct: 211 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRA 270
Query: 402 P-VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
V Y E + S+ + L A D I ++ + +++ GH
Sbjct: 271 DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGARVSI---LFGH--E 325
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFW 487
+ SPDG SG + W
Sbjct: 326 NRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 173 (66.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 53/207 (25%), Positives = 89/207 (42%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDKQN 341
H+ + SF N + LTAS D WD E+GQ++++F G + L P + N
Sbjct: 194 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG-N 252
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
++G DKK + WDM + + Q ++ H VN++ + S F + SDD + R+++
Sbjct: 253 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA 312
Query: 402 P-VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
V Y E + S+ + L A D I ++ + +++ GH
Sbjct: 313 DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSI---LFGH--E 367
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFW 487
+ SPDG SG + W
Sbjct: 368 NRVSTLRVSPDGTAFCSGSWDHTLRVW 394
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 175 (66.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 60/220 (27%), Positives = 91/220 (41%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVV 331
GK + GH VR + + DK +K WD E +VIR + G + Y +
Sbjct: 238 GKLKLSLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYH-GHLSAVYGL 296
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
L+P D +L+ D WD+ TK H AV T+ + + VT S D
Sbjct: 297 DLHPTID---VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHD 353
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451
++R+W+ + + H S+ ++ LHP A+ S DN I + + N
Sbjct: 354 TTIRLWDL-VAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDN-IKQWKFPDG---NFI 408
Query: 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 491
+ +GH VN DG V SG G WDW++
Sbjct: 409 QNLSGHNAIINTLTVN--SDGVLV-SGADNGTMHLWDWRT 445
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 41/166 (24%), Positives = 71/166 (42%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334
K R GH VR I+ F+T S D+ IK WD +G+ ++ TG I V +
Sbjct: 197 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGK-LKLSLTGHISTVRGVI 255
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
+ G DK++ WD+ ++ + Y HL AV + + VT S D +
Sbjct: 256 VSARSPYLFSCG-EDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 314
Query: 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440
R+W+ + +S H +++ ++ + S D I ++
Sbjct: 315 RIWDVRTKASVHTLSG-HTNAVATVKCQAAEPQVVTGSHDTTIRLW 359
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 152 (58.6 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 42/173 (24%), Positives = 73/173 (42%)
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
+L G D ++ W +N H V ++ V S S+RVW+
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 98
Query: 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461
+++ + H ++ S+ HP ++A+ S D I ++ R + + R+ GH A
Sbjct: 99 AKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF---RYRGHSQA- 153
Query: 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514
C + FSPDG+++ S + WD + K+ H G E+HP E
Sbjct: 154 VRC-LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 205
Score = 131 (51.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 35/152 (23%), Positives = 64/152 (42%)
Query: 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLN 334
C+ + GH+ V + + S +I+ WD E +++RT K + +
Sbjct: 59 CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH 118
Query: 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSL 394
P + + +G D I WD+ K Y H AV + F + +++DD ++
Sbjct: 119 PYGE---FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTV 175
Query: 395 RVWEFGIPVVIKYISEPHMHSMPS--ISLHPN 424
++W+ K +SE H+ P + HPN
Sbjct: 176 KLWDL---TAGKMMSEFPGHTGPVNVVEFHPN 204
Score = 119 (46.9 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 30/105 (28%), Positives = 45/105 (42%)
Query: 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKL 333
K +RT MGH + + F G + S D NIK WD G V R + ++
Sbjct: 100 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 159
Query: 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITF 378
+PD L + D + WD+ ++ E+ H G VN + F
Sbjct: 160 SPDG---KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 201
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 152 (58.6 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 271 TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
T +G R GHS V D+ +DG L+ S+D ++ WD TG R F G V
Sbjct: 9 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDV 67
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQWD-MNTKEITQEYDQHLGAVNTITFV--DSNRRFVT 387
+ + D + I+ +G DK I W+ + + T + + H V+ + F SN V+
Sbjct: 68 LSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 126
Query: 388 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444
DK ++VW +K H + ++++ P+ + A+ D Q +++ E
Sbjct: 127 CGWDKLVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 182
Score = 151 (58.2 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 344 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE-FGIP 402
L+G D + WD+ T T+ + H V ++ F NR+ V+ S DK++++W G
Sbjct: 38 LSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG-- 95
Query: 403 VVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 458
V KY + HS + + PN++ + + D + +++ K GH
Sbjct: 96 -VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHIGH- 150
Query: 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498
GY V SPDG SG +G+ WD K TL
Sbjct: 151 -TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 189
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 172 (65.6 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 52/207 (25%), Positives = 89/207 (42%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDKQN 341
H+ + SF N + LTAS D WD E+GQ++++F G + L P + N
Sbjct: 194 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG-N 252
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
++G DKK + WDM + + Q ++ H +N++ + S F + SDD + R+++
Sbjct: 253 TFVSGGCDKKAMVWDMRSGQCIQSFETHDSDINSVRYYPSGDAFASGSDDATCRLYDLRA 312
Query: 402 P-VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
V Y E + S+ + L A D I ++ + +++ GH
Sbjct: 313 DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSI---LFGH--E 367
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFW 487
+ SPDG SG + W
Sbjct: 368 NRVSTLRVSPDGTAFCSGSWDHTLRIW 394
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 172 (65.6 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 52/207 (25%), Positives = 89/207 (42%)
Query: 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDKQN 341
H+ + SF N + LTAS D WD E+GQ++++F G + L P + N
Sbjct: 194 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG-N 252
Query: 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401
++G DKK + WDM + + Q ++ H +N++ + S F + SDD + R+++
Sbjct: 253 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRA 312
Query: 402 P-VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
V Y E + S+ + L A D I ++ + +++ GH
Sbjct: 313 DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSI---LFGH--E 367
Query: 461 GYACQVNFSPDGRFVMSGDGEGKCWFW 487
+ SPDG SG + W
Sbjct: 368 NRVSTLRVSPDGTAFCSGSWDHTLRVW 394
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 172 (65.6 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 65/277 (23%), Positives = 118/277 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G RT GH+ +V+DISF + G + S D IK WD + + IRT G V V
Sbjct: 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSV 198
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+ P+ D +++ DK I W++ T + + H V + + S+D
Sbjct: 199 AIMPNGDH---IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA-AQSLDNQ---------ILIYS 441
+++RVW + E H H + IS P +++ + +++ ++ L+
Sbjct: 256 QTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 442 TRER----FQLNKKK---RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV 494
+R++ + ++ GH + V F G+F++S + WD+K+ +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372
Query: 495 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+TL HE ++H V T D +K W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 272 FHG-KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
F G +C+RT GH V ++ +G ++AS DK IK W+ +TG ++TF TG +V
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWV 237
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITF 378
+ P+ D L+A S+ + V+ W + TKE E +H V I++
Sbjct: 238 RMVRPNQD--GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Score = 144 (55.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 42/174 (24%), Positives = 78/174 (44%)
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
+++++ D I WD T + + H +V I+F S + + S D ++++W+F
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
I+ + H H++ S+++ PN + + + S D I ++ + + + K F GH
Sbjct: 181 GFECIRTM-HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGH--R 234
Query: 461 GYACQVNFSPDGRFVMS--GDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
+ V + DG + S D + W K CK L+ HE V W P
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA--ELREHEHVVECISWAP 286
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+G DK I WD++T H V + F + ++ +DDK+LRVW++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
+K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 371 RCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 172 (65.6 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 65/277 (23%), Positives = 118/277 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G RT GH+ +V+DISF + G + S D IK WD + + IRT G V V
Sbjct: 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSV 198
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+ P+ D +++ DK I W++ T + + H V + + S+D
Sbjct: 199 AIMPNGDH---IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA-AQSLDNQ---------ILIYS 441
+++RVW + E H H + IS P +++ + +++ ++ L+
Sbjct: 256 QTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 442 TRER----FQLNKKK---RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV 494
+R++ + ++ GH + V F G+F++S + WD+K+ +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372
Query: 495 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+TL HE ++H V T D +K W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 272 FHG-KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
F G +C+RT GH V ++ +G ++AS DK IK W+ +TG ++TF TG +V
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWV 237
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITF 378
+ P+ D L+A S+ + V+ W + TKE E +H V I++
Sbjct: 238 RMVRPNQD--GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Score = 144 (55.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 42/174 (24%), Positives = 78/174 (44%)
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
+++++ D I WD T + + H +V I+F S + + S D ++++W+F
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
I+ + H H++ S+++ PN + + + S D I ++ + + + K F GH
Sbjct: 181 GFECIRTM-HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGH--R 234
Query: 461 GYACQVNFSPDGRFVMS--GDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
+ V + DG + S D + W K CK L+ HE V W P
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA--ELREHEHVVECISWAP 286
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+G DK I WD++T H V + F + ++ +DDK+LRVW++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
+K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 371 RCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 172 (65.6 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 65/277 (23%), Positives = 118/277 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G RT GH+ +V+DISF + G + S D IK WD + + IRT G V V
Sbjct: 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSV 198
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+ P+ D +++ DK I W++ T + + H V + + S+D
Sbjct: 199 AIMPNGDH---IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA-AQSLDNQ---------ILIYS 441
+++RVW + E H H + IS P +++ + +++ ++ L+
Sbjct: 256 QTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 442 TRER----FQLNKKK---RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV 494
+R++ + ++ GH + V F G+F++S + WD+K+ +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372
Query: 495 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+TL HE ++H V T D +K W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 272 FHG-KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
F G +C+RT GH V ++ +G ++AS DK IK W+ +TG ++TF TG +V
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWV 237
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITF 378
+ P+ D L+A S+ + V+ W + TKE E +H V I++
Sbjct: 238 RMVRPNQD--GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Score = 144 (55.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 42/174 (24%), Positives = 78/174 (44%)
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
+++++ D I WD T + + H +V I+F S + + S D ++++W+F
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
I+ + H H++ S+++ PN + + + S D I ++ + + + K F GH
Sbjct: 181 GFECIRTM-HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGH--R 234
Query: 461 GYACQVNFSPDGRFVMS--GDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
+ V + DG + S D + W K CK L+ HE V W P
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA--ELREHEHVVECISWAP 286
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+G DK I WD++T H V + F + ++ +DDK+LRVW++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
+K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 371 RCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 172 (65.6 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 65/277 (23%), Positives = 118/277 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G RT GH+ +V+DISF + G + S D IK WD + + IRT G V V
Sbjct: 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSV 198
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+ P+ D +++ DK I W++ T + + H V + + S+D
Sbjct: 199 AIMPNGDH---IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA-AQSLDNQ---------ILIYS 441
+++RVW + E H H + IS P +++ + +++ ++ L+
Sbjct: 256 QTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 442 TRER----FQLNKKK---RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV 494
+R++ + ++ GH + V F G+F++S + WD+K+ +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372
Query: 495 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+TL HE ++H V T D +K W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 272 FHG-KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
F G +C+RT GH V ++ +G ++AS DK IK W+ +TG ++TF TG +V
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWV 237
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITF 378
+ P+ D L+A S+ + V+ W + TKE E +H V I++
Sbjct: 238 RMVRPNQD--GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Score = 144 (55.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 42/174 (24%), Positives = 78/174 (44%)
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
+++++ D I WD T + + H +V I+F S + + S D ++++W+F
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
I+ + H H++ S+++ PN + + + S D I ++ + + + K F GH
Sbjct: 181 GFECIRTM-HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGH--R 234
Query: 461 GYACQVNFSPDGRFVMS--GDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
+ V + DG + S D + W K CK L+ HE V W P
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA--ELREHEHVVECISWAP 286
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+G DK I WD++T H V + F + ++ +DDK+LRVW++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
+K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 371 RCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 172 (65.6 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 65/277 (23%), Positives = 118/277 (42%)
Query: 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--V 331
G RT GH+ +V+DISF + G + S D IK WD + + IRT G V V
Sbjct: 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSV 198
Query: 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391
+ P+ D +++ DK I W++ T + + H V + + S+D
Sbjct: 199 AIMPNGDH---IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA-AQSLDNQ---------ILIYS 441
+++RVW + E H H + IS P +++ + +++ ++ L+
Sbjct: 256 QTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 442 TRER----FQLNKKK---RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV 494
+R++ + ++ GH + V F G+F++S + WD+K+ +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372
Query: 495 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531
+TL HE ++H V T D +K W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 272 FHG-KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 330
F G +C+RT GH V ++ +G ++AS DK IK W+ +TG ++TF TG +V
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWV 237
Query: 331 VKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITF 378
+ P+ D L+A S+ + V+ W + TKE E +H V I++
Sbjct: 238 RMVRPNQD--GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Score = 144 (55.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 42/174 (24%), Positives = 78/174 (44%)
Query: 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400
+++++ D I WD T + + H +V I+F S + + S D ++++W+F
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 401 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 460
I+ + H H++ S+++ PN + + + S D I ++ + + + K F GH
Sbjct: 181 GFECIRTM-HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGH--R 234
Query: 461 GYACQVNFSPDGRFVMS--GDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512
+ V + DG + S D + W K CK L+ HE V W P
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA--ELREHEHVVECISWAP 286
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP 402
LL+G DK I WD++T H V + F + ++ +DDK+LRVW++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443
+K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 371 RCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
WARNING: HSPs involving 739 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 531 471 0.00099 118 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 989
No. of states in DFA: 631 (67 KB)
Total size of DFA: 343 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.52u 0.13s 36.65t Elapsed: 00:00:01
Total cpu time: 36.61u 0.14s 36.75t Elapsed: 00:00:01
Start: Fri May 10 12:25:38 2013 End: Fri May 10 12:25:39 2013
WARNINGS ISSUED: 2