Query 009597
Match_columns 531
No_of_seqs 1007 out of 2379
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 08:45:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009597.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009597hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.6E-39 5.4E-44 337.4 34.5 275 247-531 113-408 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 6.1E-39 2.1E-43 324.3 37.4 276 247-531 60-340 (340)
3 3ow8_A WD repeat-containing pr 100.0 1.2E-38 4.2E-43 319.7 38.6 269 253-531 47-318 (321)
4 2ynn_A Coatomer subunit beta'; 100.0 3.8E-38 1.3E-42 313.4 36.9 249 275-531 4-256 (304)
5 2pbi_B Guanine nucleotide-bind 100.0 6.3E-37 2.2E-41 311.5 37.1 278 246-531 68-354 (354)
6 4ery_A WD repeat-containing pr 100.0 9.1E-37 3.1E-41 303.6 36.9 278 247-531 28-309 (312)
7 2ynn_A Coatomer subunit beta'; 100.0 9.6E-37 3.3E-41 303.2 33.2 275 247-530 18-298 (304)
8 3iz6_a 40S ribosomal protein R 100.0 1E-37 3.4E-42 320.4 26.2 283 246-531 70-372 (380)
9 4gqb_B Methylosome protein 50; 100.0 6.7E-37 2.3E-41 310.2 31.2 274 247-531 35-328 (344)
10 1vyh_C Platelet-activating fac 100.0 3E-36 1E-40 312.7 35.3 246 276-531 100-366 (410)
11 3ow8_A WD repeat-containing pr 100.0 9.7E-36 3.3E-40 298.6 33.6 250 273-531 21-276 (321)
12 1erj_A Transcriptional repress 100.0 3.4E-35 1.1E-39 302.9 37.0 279 246-531 68-386 (393)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.4E-35 8E-40 298.7 34.3 279 248-531 22-332 (345)
14 3frx_A Guanine nucleotide-bind 100.0 6.9E-35 2.4E-39 291.9 37.1 264 255-531 31-314 (319)
15 4g56_B MGC81050 protein; prote 100.0 2.1E-36 7.3E-41 308.0 26.5 276 246-531 46-340 (357)
16 1got_B GT-beta; complex (GTP-b 100.0 2.4E-34 8.2E-39 290.6 38.6 248 273-531 44-298 (340)
17 1nr0_A Actin interacting prote 100.0 5.2E-35 1.8E-39 319.0 35.1 275 249-531 154-564 (611)
18 4gqb_B Methylosome protein 50; 100.0 7.7E-35 2.6E-39 295.0 30.2 241 282-531 28-286 (344)
19 2pm7_B Protein transport prote 100.0 1.9E-34 6.4E-39 285.7 31.7 251 277-531 2-282 (297)
20 2xzm_R RACK1; ribosome, transl 100.0 4.6E-34 1.6E-38 288.7 34.7 266 253-531 38-337 (343)
21 4ery_A WD repeat-containing pr 100.0 8.5E-34 2.9E-38 282.1 36.1 250 274-531 13-265 (312)
22 2pbi_B Guanine nucleotide-bind 100.0 2.1E-33 7.3E-38 285.5 39.0 250 272-531 52-312 (354)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.1E-34 2.4E-38 287.7 35.2 251 274-531 5-280 (345)
24 2hes_X YDR267CP; beta-propelle 100.0 7.2E-34 2.5E-38 285.9 34.5 269 256-531 26-325 (330)
25 3zwl_B Eukaryotic translation 100.0 1.2E-33 4.2E-38 285.4 36.0 275 246-531 36-343 (369)
26 1nr0_A Actin interacting prote 100.0 1.4E-33 5E-38 307.6 37.7 275 249-531 25-352 (611)
27 3iz6_a 40S ribosomal protein R 100.0 2.6E-34 8.8E-39 294.9 28.7 258 266-531 48-326 (380)
28 4g56_B MGC81050 protein; prote 100.0 3.2E-34 1.1E-38 292.0 28.8 256 264-531 26-298 (357)
29 3bg1_A Protein SEC13 homolog; 100.0 1.5E-34 5.2E-39 289.1 25.5 249 279-531 8-290 (316)
30 2hes_X YDR267CP; beta-propelle 100.0 4E-33 1.4E-37 280.5 35.7 247 274-531 4-277 (330)
31 2ymu_A WD-40 repeat protein; u 100.0 3.3E-33 1.1E-37 301.3 36.7 267 249-531 310-577 (577)
32 1erj_A Transcriptional repress 100.0 4.2E-33 1.4E-37 287.2 35.8 241 282-531 62-338 (393)
33 1sq9_A Antiviral protein SKI8; 100.0 1.3E-33 4.4E-38 289.6 30.3 270 255-531 27-392 (397)
34 3frx_A Guanine nucleotide-bind 100.0 1.9E-32 6.7E-37 274.1 36.4 245 274-531 7-264 (319)
35 3gre_A Serine/threonine-protei 100.0 4.6E-34 1.6E-38 297.6 25.6 282 247-531 68-437 (437)
36 1k8k_C P40, ARP2/3 complex 41 100.0 3.2E-33 1.1E-37 283.5 30.7 273 249-531 15-358 (372)
37 1r5m_A SIR4-interacting protei 100.0 2.3E-33 8E-38 289.0 30.0 271 248-531 114-422 (425)
38 4gga_A P55CDC, cell division c 100.0 2.9E-32 1E-36 283.3 37.5 270 249-531 112-392 (420)
39 1gxr_A ESG1, transducin-like e 100.0 1.6E-32 5.5E-37 273.9 34.2 270 248-531 57-334 (337)
40 2ymu_A WD-40 repeat protein; u 100.0 2.1E-32 7.1E-37 295.1 37.3 268 249-531 269-536 (577)
41 4a11_B DNA excision repair pro 100.0 5.7E-33 2E-37 284.8 31.1 283 248-531 49-362 (408)
42 3dwl_C Actin-related protein 2 100.0 1.1E-33 3.6E-38 288.6 25.0 277 247-531 16-376 (377)
43 4aez_A CDC20, WD repeat-contai 100.0 1.6E-32 5.5E-37 283.3 34.0 263 257-531 106-377 (401)
44 3dm0_A Maltose-binding peripla 100.0 1.4E-32 4.6E-37 304.3 35.6 264 256-531 397-690 (694)
45 2xzm_R RACK1; ribosome, transl 100.0 4.4E-32 1.5E-36 274.2 35.3 247 273-531 10-282 (343)
46 3ei3_B DNA damage-binding prot 100.0 9.1E-33 3.1E-37 282.7 30.1 272 249-531 80-379 (383)
47 4aow_A Guanine nucleotide-bind 100.0 1.3E-31 4.3E-36 268.3 37.7 273 247-531 43-334 (340)
48 3jrp_A Fusion protein of prote 100.0 1E-32 3.5E-37 280.0 29.6 254 274-531 1-284 (379)
49 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-32 4.3E-37 274.8 29.3 249 278-531 5-334 (351)
50 3i2n_A WD repeat-containing pr 100.0 1.9E-32 6.5E-37 276.0 30.7 278 249-531 25-350 (357)
51 2pm9_A Protein WEB1, protein t 100.0 3E-33 1E-37 288.4 24.8 264 261-531 42-334 (416)
52 1gxr_A ESG1, transducin-like e 100.0 9.7E-32 3.3E-36 268.3 34.7 269 250-531 17-293 (337)
53 3odt_A Protein DOA1; ubiquitin 100.0 1E-31 3.5E-36 265.5 34.5 263 252-531 27-293 (313)
54 3k26_A Polycomb protein EED; W 100.0 4.1E-33 1.4E-37 281.6 24.9 266 259-531 39-363 (366)
55 3vl1_A 26S proteasome regulato 100.0 9.6E-33 3.3E-37 285.5 28.0 274 248-531 62-362 (420)
56 4ggc_A P55CDC, cell division c 100.0 2.3E-31 7.7E-36 263.9 34.7 271 248-531 31-312 (318)
57 3vl1_A 26S proteasome regulato 100.0 5.8E-32 2E-36 279.6 28.6 273 251-531 106-416 (420)
58 3v7d_B Cell division control p 100.0 7.1E-31 2.4E-35 275.7 36.9 264 253-531 131-418 (464)
59 2pm9_A Protein WEB1, protein t 100.0 2.6E-33 8.8E-38 289.0 17.9 275 249-531 74-411 (416)
60 2j04_B YDR362CP, TAU91; beta p 100.0 1.7E-32 5.8E-37 292.6 24.1 271 251-531 170-514 (524)
61 4aow_A Guanine nucleotide-bind 100.0 1.6E-30 5.6E-35 260.2 36.6 255 266-531 20-283 (340)
62 4e54_B DNA damage-binding prot 100.0 1.2E-32 4E-37 287.7 21.3 280 246-531 123-427 (435)
63 1r5m_A SIR4-interacting protei 100.0 3.9E-31 1.3E-35 272.4 32.4 273 246-531 49-358 (425)
64 1sq9_A Antiviral protein SKI8; 100.0 2.1E-31 7.2E-36 273.1 28.8 253 275-531 7-319 (397)
65 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-31 4E-36 276.7 26.6 268 256-531 49-339 (402)
66 1k8k_C P40, ARP2/3 complex 41 100.0 8.4E-31 2.9E-35 265.7 32.1 245 280-531 4-271 (372)
67 3ei3_B DNA damage-binding prot 100.0 4.9E-31 1.7E-35 269.8 29.9 252 272-531 61-336 (383)
68 1p22_A F-BOX/WD-repeat protein 100.0 4.6E-31 1.6E-35 275.4 30.1 258 253-531 142-411 (435)
69 3mkq_A Coatomer beta'-subunit; 100.0 7.9E-31 2.7E-35 294.4 34.3 249 275-531 4-256 (814)
70 3dm0_A Maltose-binding peripla 100.0 1.6E-30 5.4E-35 287.7 35.9 246 275-531 373-629 (694)
71 4h5i_A Guanine nucleotide-exch 100.0 1.2E-31 4.2E-36 273.7 24.5 275 248-531 20-340 (365)
72 3dwl_C Actin-related protein 2 100.0 2.9E-32 9.9E-37 277.9 19.6 245 279-531 6-278 (377)
73 3k26_A Polycomb protein EED; W 100.0 8.4E-31 2.9E-35 264.6 28.7 249 278-531 12-315 (366)
74 3sfz_A APAF-1, apoptotic pepti 100.0 2.6E-30 9E-35 303.6 36.5 278 247-531 620-910 (1249)
75 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.5E-30 2.2E-34 267.3 35.4 258 253-531 128-388 (445)
76 3mkq_A Coatomer beta'-subunit; 100.0 1.4E-30 4.8E-35 292.4 32.1 277 247-531 18-299 (814)
77 3mmy_A MRNA export factor; mRN 100.0 2.8E-30 9.7E-35 260.6 31.1 280 246-530 43-342 (368)
78 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-31 3.6E-36 286.5 21.6 252 274-531 124-425 (524)
79 3i2n_A WD repeat-containing pr 100.0 4.9E-31 1.7E-35 265.6 25.3 249 277-531 11-288 (357)
80 1yfq_A Cell cycle arrest prote 100.0 5.6E-31 1.9E-35 264.0 24.8 269 248-526 17-315 (342)
81 3zwl_B Eukaryotic translation 100.0 2E-29 6.9E-34 254.4 36.0 245 275-531 23-301 (369)
82 3dw8_B Serine/threonine-protei 100.0 9.9E-31 3.4E-35 272.4 26.8 246 282-531 26-370 (447)
83 1pgu_A Actin interacting prote 100.0 5E-30 1.7E-34 277.8 32.6 274 247-531 211-611 (615)
84 3gre_A Serine/threonine-protei 100.0 1E-30 3.5E-35 272.2 26.0 253 269-531 48-356 (437)
85 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-29 4.2E-34 265.2 34.1 262 254-531 169-439 (445)
86 1yfq_A Cell cycle arrest prote 100.0 1.8E-30 6.2E-35 260.3 26.2 243 276-531 3-279 (342)
87 3v7d_B Cell division control p 100.0 1.9E-29 6.4E-34 264.8 34.7 241 275-531 112-378 (464)
88 3dw8_B Serine/threonine-protei 100.0 3.2E-30 1.1E-34 268.5 28.5 274 245-530 31-442 (447)
89 3odt_A Protein DOA1; ubiquitin 100.0 3.3E-29 1.1E-33 247.4 33.7 239 274-531 8-252 (313)
90 2pm7_B Protein transport prote 100.0 8.6E-30 3E-34 252.1 28.1 240 249-490 16-284 (297)
91 3jro_A Fusion protein of prote 100.0 1.4E-30 4.6E-35 290.9 23.8 251 277-531 2-282 (753)
92 2xyi_A Probable histone-bindin 100.0 1E-29 3.5E-34 265.0 28.1 247 278-531 122-407 (430)
93 4e54_B DNA damage-binding prot 100.0 5.5E-30 1.9E-34 267.4 24.6 249 276-531 111-384 (435)
94 1pgu_A Actin interacting prote 100.0 5E-29 1.7E-33 269.9 32.4 272 248-531 70-363 (615)
95 2oaj_A Protein SNI1; WD40 repe 100.0 2.8E-29 9.4E-34 285.0 30.8 151 250-405 66-246 (902)
96 3sfz_A APAF-1, apoptotic pepti 100.0 7.7E-31 2.6E-35 308.2 18.2 274 248-531 967-1246(1249)
97 3lrv_A PRE-mRNA-splicing facto 100.0 4.4E-29 1.5E-33 252.0 24.8 269 252-530 46-329 (343)
98 3vu4_A KMHSV2; beta-propeller 100.0 8.5E-29 2.9E-33 251.5 26.6 245 270-531 5-268 (355)
99 3bg1_A Protein SEC13 homolog; 100.0 3.8E-29 1.3E-33 249.8 23.5 240 247-490 18-292 (316)
100 1l0q_A Surface layer protein; 100.0 1.2E-27 4.3E-32 244.8 35.4 263 256-531 4-272 (391)
101 1p22_A F-BOX/WD-repeat protein 100.0 7.4E-28 2.5E-32 251.1 33.7 235 277-531 126-362 (435)
102 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.5E-28 1.9E-32 253.3 32.5 242 282-530 100-387 (450)
103 2oaj_A Protein SNI1; WD40 repe 100.0 7.9E-28 2.7E-32 273.0 34.7 243 280-531 13-309 (902)
104 3lrv_A PRE-mRNA-splicing facto 100.0 3.9E-29 1.3E-33 252.4 21.1 228 291-531 43-289 (343)
105 3mmy_A MRNA export factor; mRN 100.0 5.1E-28 1.7E-32 244.1 28.8 252 268-531 23-301 (368)
106 4aez_A CDC20, WD repeat-contai 100.0 1E-27 3.5E-32 247.3 31.7 241 276-531 83-333 (401)
107 3jrp_A Fusion protein of prote 100.0 5.1E-28 1.8E-32 245.3 28.8 244 248-492 17-288 (379)
108 2w18_A PALB2, fancn, partner a 100.0 5.8E-28 2E-32 238.9 28.1 257 264-531 63-354 (356)
109 4a11_B DNA excision repair pro 100.0 7.1E-28 2.4E-32 246.8 27.6 260 266-531 25-320 (408)
110 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.3E-27 7.8E-32 248.6 28.8 238 284-531 4-336 (450)
111 3f3f_A Nucleoporin SEH1; struc 100.0 2.2E-27 7.6E-32 236.6 26.5 248 248-498 17-344 (351)
112 2aq5_A Coronin-1A; WD40 repeat 100.0 2.5E-27 8.7E-32 244.2 27.6 240 286-531 36-296 (402)
113 3bws_A Protein LP49; two-domai 100.0 1.1E-26 3.9E-31 241.0 31.5 268 251-531 131-429 (433)
114 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-27 3.7E-32 251.4 19.6 258 246-531 19-294 (588)
115 4h5i_A Guanine nucleotide-exch 100.0 2.8E-26 9.6E-31 234.0 29.5 225 259-491 99-343 (365)
116 4gq1_A NUP37; propeller, trans 100.0 4.1E-27 1.4E-31 242.5 23.4 247 279-526 84-382 (393)
117 2xyi_A Probable histone-bindin 99.9 3.4E-26 1.2E-30 238.4 24.7 239 248-491 134-410 (430)
118 3jro_A Fusion protein of prote 99.9 3E-26 1E-30 255.8 25.2 241 249-491 16-285 (753)
119 3vu4_A KMHSV2; beta-propeller 99.9 1.2E-25 4.2E-30 228.2 27.2 265 246-531 23-333 (355)
120 4gga_A P55CDC, cell division c 99.9 9.3E-25 3.2E-29 226.6 31.9 235 286-531 107-350 (420)
121 4ggc_A P55CDC, cell division c 99.9 2.7E-24 9.2E-29 212.8 32.2 234 287-531 28-270 (318)
122 1l0q_A Surface layer protein; 99.9 5.8E-24 2E-28 217.5 33.3 244 249-504 38-288 (391)
123 3bws_A Protein LP49; two-domai 99.9 1.1E-23 3.6E-28 218.6 34.5 253 265-531 102-387 (433)
124 2j04_A TAU60, YPL007P, hypothe 99.9 9.2E-25 3.1E-29 229.2 25.3 239 266-523 66-350 (588)
125 4gq1_A NUP37; propeller, trans 99.9 5.2E-25 1.8E-29 226.8 19.7 232 248-488 95-386 (393)
126 1nir_A Nitrite reductase; hemo 99.9 7.2E-23 2.5E-27 219.5 28.4 275 252-531 147-455 (543)
127 2w18_A PALB2, fancn, partner a 99.9 1.6E-22 5.6E-27 199.9 26.7 201 283-489 110-355 (356)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.4E-22 2.9E-26 204.3 30.7 235 264-512 159-407 (415)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.6E-22 1.9E-26 205.7 27.7 252 265-531 94-384 (415)
130 1ri6_A Putative isomerase YBHE 99.9 1.9E-21 6.6E-26 194.1 28.7 267 259-531 10-305 (343)
131 3u4y_A Uncharacterized protein 99.9 3.8E-21 1.3E-25 191.8 28.2 266 256-531 12-301 (331)
132 1nir_A Nitrite reductase; hemo 99.9 3.4E-21 1.2E-25 206.5 29.0 279 247-531 183-511 (543)
133 2ojh_A Uncharacterized protein 99.9 1.5E-21 5.3E-26 189.8 23.5 252 259-525 17-293 (297)
134 3vgz_A Uncharacterized protein 99.9 4.5E-20 1.5E-24 185.3 31.8 243 283-531 39-300 (353)
135 1pby_B Quinohemoprotein amine 99.9 1.1E-20 3.8E-25 188.1 27.1 259 257-531 4-307 (337)
136 3vgz_A Uncharacterized protein 99.9 2.6E-19 8.8E-24 179.7 34.4 250 263-524 68-334 (353)
137 3hfq_A Uncharacterized protein 99.9 2.4E-19 8.3E-24 180.3 31.6 260 265-530 19-313 (347)
138 2ecf_A Dipeptidyl peptidase IV 99.9 2.1E-20 7.3E-25 207.7 23.2 275 249-531 43-410 (741)
139 1xfd_A DIP, dipeptidyl aminope 99.8 9.3E-20 3.2E-24 201.8 25.7 272 249-531 23-390 (723)
140 1jmx_B Amine dehydrogenase; ox 99.8 2.2E-19 7.6E-24 179.7 24.6 232 289-531 4-322 (349)
141 2z3z_A Dipeptidyl aminopeptida 99.8 8.6E-20 2.9E-24 201.7 23.3 253 266-525 46-378 (706)
142 3u4y_A Uncharacterized protein 99.8 3.6E-19 1.2E-23 177.4 25.7 233 290-531 3-249 (331)
143 3scy_A Hypothetical bacterial 99.8 3.2E-18 1.1E-22 173.2 32.7 262 262-530 25-333 (361)
144 2ecf_A Dipeptidyl peptidase IV 99.8 2.1E-19 7.1E-24 199.7 24.4 236 284-530 36-363 (741)
145 2z3z_A Dipeptidyl aminopeptida 99.8 6.2E-18 2.1E-22 186.8 27.4 255 264-531 101-432 (706)
146 2ojh_A Uncharacterized protein 99.8 3.1E-18 1E-22 166.4 22.0 219 301-531 17-255 (297)
147 1ri6_A Putative isomerase YBHE 99.8 8.4E-18 2.9E-22 167.6 25.5 226 298-531 7-259 (343)
148 3o4h_A Acylamino-acid-releasin 99.8 4.1E-18 1.4E-22 184.1 24.3 231 284-531 21-273 (582)
149 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.4E-17 4.8E-22 169.2 26.9 246 283-531 38-338 (365)
150 3o4h_A Acylamino-acid-releasin 99.8 3.2E-18 1.1E-22 185.0 22.7 259 250-531 29-312 (582)
151 2oit_A Nucleoporin 214KDA; NH2 99.8 6E-18 2.1E-22 176.3 22.7 204 283-492 35-279 (434)
152 1xfd_A DIP, dipeptidyl aminope 99.8 1.4E-18 4.8E-23 192.4 18.5 239 286-531 18-341 (723)
153 1k32_A Tricorn protease; prote 99.8 1.3E-17 4.4E-22 192.6 26.8 256 258-531 218-499 (1045)
154 1jmx_B Amine dehydrogenase; ox 99.8 4.1E-17 1.4E-21 163.1 26.1 234 253-501 10-335 (349)
155 1pby_B Quinohemoprotein amine 99.8 1.7E-17 5.7E-22 165.0 23.1 233 257-503 49-322 (337)
156 1q7f_A NHL, brain tumor CG1071 99.8 3.6E-16 1.2E-20 152.7 31.7 239 281-531 26-277 (286)
157 2oit_A Nucleoporin 214KDA; NH2 99.8 2.5E-18 8.4E-23 179.3 15.6 209 306-531 23-275 (434)
158 1k32_A Tricorn protease; prote 99.8 2.2E-17 7.7E-22 190.6 24.6 240 275-531 194-458 (1045)
159 3pe7_A Oligogalacturonate lyas 99.8 2.8E-17 9.5E-22 167.5 19.6 276 250-530 43-378 (388)
160 3hfq_A Uncharacterized protein 99.7 1.2E-15 4.1E-20 153.2 30.2 228 263-495 62-323 (347)
161 3fvz_A Peptidyl-glycine alpha- 99.7 7.9E-16 2.7E-20 154.0 28.3 240 284-531 23-319 (329)
162 1z68_A Fibroblast activation p 99.7 3.1E-17 1.1E-21 181.6 19.7 262 262-531 34-388 (719)
163 1z68_A Fibroblast activation p 99.7 3.7E-17 1.3E-21 181.0 16.9 235 289-531 20-343 (719)
164 3scy_A Hypothetical bacterial 99.7 5.7E-15 1.9E-19 149.2 30.2 241 263-511 74-360 (361)
165 2oiz_A Aromatic amine dehydrog 99.7 3.8E-15 1.3E-19 151.2 26.6 256 263-531 30-331 (361)
166 3pe7_A Oligogalacturonate lyas 99.7 4.5E-15 1.5E-19 151.0 25.7 254 269-531 15-326 (388)
167 4a5s_A Dipeptidyl peptidase 4 99.7 1.6E-15 5.4E-20 168.8 20.0 236 286-531 18-350 (740)
168 2dg1_A DRP35, lactonase; beta 99.7 1.5E-13 5.2E-18 136.9 32.2 251 261-524 24-300 (333)
169 3dsm_A Uncharacterized protein 99.6 1.1E-13 3.8E-18 138.4 29.5 258 261-531 14-299 (328)
170 3e5z_A Putative gluconolactona 99.6 6.2E-14 2.1E-18 137.6 26.6 240 275-529 18-282 (296)
171 3c5m_A Oligogalacturonate lyas 99.6 8.3E-15 2.8E-19 149.1 20.5 254 264-530 60-378 (396)
172 3azo_A Aminopeptidase; POP fam 99.6 1.4E-14 4.9E-19 158.6 22.8 247 278-530 17-319 (662)
173 3dsm_A Uncharacterized protein 99.6 1.2E-13 4.3E-18 138.0 26.6 237 261-510 61-319 (328)
174 3azo_A Aminopeptidase; POP fam 99.6 8E-14 2.7E-18 152.6 26.3 258 262-530 45-363 (662)
175 1q7f_A NHL, brain tumor CG1071 99.6 1.8E-13 6.2E-18 133.3 26.1 228 253-492 40-281 (286)
176 2oiz_A Aromatic amine dehydrog 99.6 1.9E-13 6.6E-18 138.6 27.1 242 261-514 78-359 (361)
177 3c5m_A Oligogalacturonate lyas 99.6 1.8E-14 6.2E-19 146.6 19.3 252 268-531 14-326 (396)
178 1qks_A Cytochrome CD1 nitrite 99.6 1.6E-12 5.5E-17 139.2 34.2 273 256-531 169-474 (567)
179 4a5s_A Dipeptidyl peptidase 4 99.6 2.6E-14 8.8E-19 159.0 20.9 264 250-523 24-383 (740)
180 2gop_A Trilobed protease; beta 99.6 3.4E-13 1.1E-17 135.0 26.9 237 263-530 42-327 (347)
181 2xdw_A Prolyl endopeptidase; a 99.6 1.7E-13 5.9E-18 151.5 27.1 244 282-531 122-411 (710)
182 1jof_A Carboxy-CIS,CIS-muconat 99.6 9.1E-14 3.1E-18 141.0 22.6 235 251-492 48-342 (365)
183 1rwi_B Serine/threonine-protei 99.6 8.7E-13 3E-17 127.0 26.0 235 286-531 25-261 (270)
184 3fvz_A Peptidyl-glycine alpha- 99.6 7.2E-13 2.4E-17 132.4 25.1 222 263-490 68-321 (329)
185 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 3.6E-12 1.2E-16 125.4 26.5 243 280-531 13-296 (314)
186 3no2_A Uncharacterized protein 99.5 5.6E-12 1.9E-16 122.8 27.3 246 254-508 5-271 (276)
187 2bkl_A Prolyl endopeptidase; m 99.5 3.5E-13 1.2E-17 148.7 21.0 241 282-531 118-394 (695)
188 2z2n_A Virginiamycin B lyase; 99.5 2.7E-11 9.2E-16 117.9 32.2 239 279-531 9-252 (299)
189 3no2_A Uncharacterized protein 99.5 8.5E-12 2.9E-16 121.5 27.9 212 295-521 4-230 (276)
190 2gop_A Trilobed protease; beta 99.5 4.2E-12 1.4E-16 127.0 25.8 217 285-530 15-288 (347)
191 2z2n_A Virginiamycin B lyase; 99.5 8.4E-11 2.9E-15 114.4 33.1 259 254-528 26-290 (299)
192 3g4e_A Regucalcin; six bladed 99.5 9.6E-11 3.3E-15 115.1 32.9 236 279-524 7-263 (297)
193 2dg1_A DRP35, lactonase; beta 99.5 3.5E-12 1.2E-16 126.9 22.8 233 285-531 6-260 (333)
194 2mad_H Methylamine dehydrogena 99.5 2.1E-10 7.3E-15 116.6 34.3 253 265-531 48-347 (373)
195 1qks_A Cytochrome CD1 nitrite 99.5 6.6E-11 2.3E-15 126.7 31.2 229 294-531 165-418 (567)
196 3hrp_A Uncharacterized protein 99.4 1.2E-10 4E-15 120.0 31.4 235 285-530 131-406 (409)
197 3e5z_A Putative gluconolactona 99.4 3E-11 1E-15 118.3 25.3 228 249-494 34-289 (296)
198 2qc5_A Streptogramin B lactona 99.4 6.6E-10 2.3E-14 108.0 33.1 238 281-531 16-257 (300)
199 3sjl_D Methylamine dehydrogena 99.4 9E-11 3.1E-15 118.7 27.2 259 263-531 58-360 (386)
200 1yr2_A Prolyl oligopeptidase; 99.4 6.1E-11 2.1E-15 131.7 27.1 239 282-531 160-438 (741)
201 1rwi_B Serine/threonine-protei 99.4 3.1E-11 1.1E-15 116.1 21.5 230 253-493 34-266 (270)
202 2qc5_A Streptogramin B lactona 99.4 9.2E-10 3.2E-14 107.0 31.0 261 254-530 31-296 (300)
203 2ghs_A AGR_C_1268P; regucalcin 99.3 2.3E-09 7.7E-14 106.8 32.3 227 285-524 49-293 (326)
204 3dr2_A Exported gluconolactona 99.3 3.2E-10 1.1E-14 111.7 25.8 238 277-529 37-302 (305)
205 3c75_H MADH, methylamine dehyd 99.3 3.5E-10 1.2E-14 116.2 26.9 257 264-531 99-399 (426)
206 2xdw_A Prolyl endopeptidase; a 99.3 4.4E-10 1.5E-14 124.2 26.5 173 351-530 152-362 (710)
207 1xip_A Nucleoporin NUP159; bet 99.3 3.9E-11 1.3E-15 121.7 15.4 173 286-478 39-231 (388)
208 2mad_H Methylamine dehydrogena 99.2 9E-09 3.1E-13 104.5 30.9 224 262-498 95-357 (373)
209 1xip_A Nucleoporin NUP159; bet 99.2 2.6E-10 8.8E-15 115.7 16.8 170 328-521 40-231 (388)
210 3sjl_D Methylamine dehydrogena 99.2 3.9E-09 1.3E-13 106.7 25.1 238 262-512 107-383 (386)
211 3iuj_A Prolyl endopeptidase; h 99.2 8E-10 2.7E-14 121.8 21.7 238 282-531 126-402 (693)
212 2bkl_A Prolyl endopeptidase; m 99.2 6.3E-10 2.1E-14 122.6 19.9 237 248-494 126-400 (695)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.4E-08 4.9E-13 99.4 27.2 220 260-491 42-299 (314)
214 2qe8_A Uncharacterized protein 99.1 2.3E-09 7.9E-14 107.5 20.0 223 282-525 64-312 (343)
215 1kb0_A Quinohemoprotein alcoho 99.1 2.7E-09 9.4E-14 116.9 21.6 264 263-531 86-504 (677)
216 3c75_H MADH, methylamine dehyd 99.1 6.1E-09 2.1E-13 107.0 22.6 226 262-498 147-409 (426)
217 1mda_H Methylamine dehydrogena 99.1 3.4E-09 1.2E-13 107.0 20.1 248 265-531 47-343 (368)
218 2hz6_A Endoplasmic reticulum t 99.1 7E-11 2.4E-15 120.1 7.4 195 295-507 8-207 (369)
219 2ece_A 462AA long hypothetical 99.1 5.8E-08 2E-12 99.0 28.5 223 294-522 93-399 (462)
220 3q7m_A Lipoprotein YFGL, BAMB; 99.1 4.1E-08 1.4E-12 99.3 27.3 253 261-531 110-375 (376)
221 1yr2_A Prolyl oligopeptidase; 99.1 1.2E-08 4.1E-13 113.2 25.3 228 294-530 116-389 (741)
222 1yiq_A Quinohemoprotein alcoho 99.1 4.8E-09 1.6E-13 115.2 21.4 265 262-531 78-502 (689)
223 2iwa_A Glutamine cyclotransfer 99.1 3.3E-08 1.1E-12 94.8 24.3 214 273-492 8-238 (266)
224 3hrp_A Uncharacterized protein 99.1 2.8E-08 9.5E-13 102.2 24.9 225 254-489 142-408 (409)
225 3q7m_A Lipoprotein YFGL, BAMB; 99.0 9.5E-08 3.3E-12 96.6 26.7 252 261-531 60-334 (376)
226 3g4e_A Regucalcin; six bladed 99.0 2.2E-07 7.6E-12 90.8 27.5 184 338-531 23-226 (297)
227 2iwa_A Glutamine cyclotransfer 99.0 1.5E-07 5.1E-12 90.2 24.8 206 316-529 9-232 (266)
228 1yiq_A Quinohemoprotein alcoho 99.0 7.8E-08 2.7E-12 105.6 26.0 254 260-523 127-538 (689)
229 2qe8_A Uncharacterized protein 99.0 1.2E-08 4.1E-13 102.3 17.8 224 285-531 17-275 (343)
230 1mda_H Methylamine dehydrogena 99.0 1.2E-08 4.1E-13 103.0 17.6 232 261-512 93-366 (368)
231 3nol_A Glutamine cyclotransfer 99.0 8.8E-08 3E-12 90.8 22.0 199 274-480 31-244 (262)
232 3dr2_A Exported gluconolactona 99.0 1.4E-07 4.6E-12 92.7 23.9 215 256-488 59-303 (305)
233 1kb0_A Quinohemoprotein alcoho 98.9 1.8E-07 6.3E-12 102.4 26.7 251 260-520 134-537 (677)
234 3nol_A Glutamine cyclotransfer 98.9 2.4E-07 8.3E-12 87.8 23.6 196 317-521 32-243 (262)
235 3nok_A Glutaminyl cyclase; bet 98.9 2.6E-07 8.8E-12 87.6 23.5 196 317-522 44-254 (268)
236 2hz6_A Endoplasmic reticulum t 98.9 1.4E-10 4.9E-15 117.7 1.1 177 341-531 10-189 (369)
237 2ece_A 462AA long hypothetical 98.9 6.2E-07 2.1E-11 91.4 26.7 220 256-479 98-399 (462)
238 2ghs_A AGR_C_1268P; regucalcin 98.9 6.9E-07 2.4E-11 88.6 26.9 180 339-531 60-257 (326)
239 3mbr_X Glutamine cyclotransfer 98.9 4.8E-07 1.7E-11 85.0 23.1 199 274-480 9-223 (243)
240 3mbr_X Glutamine cyclotransfer 98.9 1.2E-06 4E-11 82.4 25.6 197 317-521 10-222 (243)
241 3hxj_A Pyrrolo-quinoline quino 98.9 2.7E-07 9.1E-12 91.0 21.7 240 266-530 80-320 (330)
242 1fwx_A Nitrous oxide reductase 98.8 1.3E-07 4.3E-12 99.8 19.5 224 294-522 99-406 (595)
243 3hxj_A Pyrrolo-quinoline quino 98.8 6.4E-08 2.2E-12 95.4 16.5 244 261-531 37-281 (330)
244 3nok_A Glutaminyl cyclase; bet 98.8 4.9E-07 1.7E-11 85.7 21.1 197 274-479 43-253 (268)
245 3iuj_A Prolyl endopeptidase; h 98.8 2.4E-07 8.1E-12 102.0 22.0 233 249-494 135-408 (693)
246 1kv9_A Type II quinohemoprotei 98.8 2.9E-07 9.9E-12 100.7 21.0 264 263-531 75-485 (668)
247 1fwx_A Nitrous oxide reductase 98.8 8.2E-07 2.8E-11 93.6 23.5 181 341-531 103-358 (595)
248 1npe_A Nidogen, entactin; glyc 98.8 1.6E-05 5.6E-10 75.9 30.1 218 285-513 36-261 (267)
249 2fp8_A Strictosidine synthase; 98.7 1E-05 3.6E-10 79.7 27.6 239 280-531 14-310 (322)
250 2p4o_A Hypothetical protein; p 98.7 2.5E-05 8.7E-10 76.4 29.6 239 273-522 21-277 (306)
251 1w6s_A Methanol dehydrogenase 98.6 6E-06 2E-10 88.7 24.9 266 263-531 72-500 (599)
252 2ad6_A Methanol dehydrogenase 98.6 5.9E-06 2E-10 88.5 23.8 264 263-531 72-491 (571)
253 1npe_A Nidogen, entactin; glyc 98.6 3E-05 1E-09 74.1 26.5 223 297-531 2-235 (267)
254 1flg_A Protein (quinoprotein e 98.5 2.2E-05 7.4E-10 84.3 25.4 261 266-531 80-513 (582)
255 2ad6_A Methanol dehydrogenase 98.5 3.9E-05 1.3E-09 82.1 25.5 230 261-501 122-504 (571)
256 3tc9_A Hypothetical hydrolase; 98.4 7.9E-05 2.7E-09 76.8 26.8 240 286-530 138-426 (430)
257 1kv9_A Type II quinohemoprotei 98.4 2.5E-05 8.6E-10 85.3 23.5 253 260-522 123-520 (668)
258 4a2l_A BT_4663, two-component 98.4 0.0006 2.1E-08 75.9 34.2 235 284-530 262-522 (795)
259 4a2l_A BT_4663, two-component 98.4 0.0003 1E-08 78.4 30.9 236 287-531 175-433 (795)
260 3qqz_A Putative uncharacterize 98.4 0.0003 1E-08 66.7 26.1 205 278-488 20-250 (255)
261 4hw6_A Hypothetical protein, I 98.3 0.00024 8.3E-09 73.2 27.2 239 286-530 140-429 (433)
262 3v64_C Agrin; beta propeller, 98.3 0.00046 1.6E-08 68.9 28.1 235 283-529 32-270 (349)
263 1w6s_A Methanol dehydrogenase 98.3 0.00018 6.1E-09 77.2 25.5 254 260-522 127-535 (599)
264 3v65_B Low-density lipoprotein 98.3 0.00055 1.9E-08 69.3 27.4 233 286-530 78-314 (386)
265 1ijq_A LDL receptor, low-densi 98.2 0.0019 6.4E-08 63.4 29.7 220 299-530 4-234 (316)
266 1ijq_A LDL receptor, low-densi 98.2 0.0049 1.7E-07 60.4 32.0 226 266-499 12-246 (316)
267 3v64_C Agrin; beta propeller, 98.2 0.0011 3.9E-08 66.0 27.3 207 284-499 72-283 (349)
268 1flg_A Protein (quinoprotein e 98.1 0.00042 1.4E-08 74.2 24.8 255 261-522 124-548 (582)
269 3v9f_A Two-component system se 98.1 0.00085 2.9E-08 74.5 28.3 237 284-531 312-565 (781)
270 3v65_B Low-density lipoprotein 98.1 0.0016 5.6E-08 65.8 27.0 208 284-500 115-327 (386)
271 3p5b_L Low density lipoprotein 98.1 0.0067 2.3E-07 61.6 31.6 211 282-499 109-328 (400)
272 3p5b_L Low density lipoprotein 98.1 0.003 1E-07 64.2 28.7 222 298-530 85-316 (400)
273 1k3i_A Galactose oxidase precu 98.1 8E-05 2.8E-09 81.1 17.5 232 289-524 190-476 (656)
274 2xe4_A Oligopeptidase B; hydro 98.0 0.00054 1.9E-08 75.8 23.7 199 282-489 170-398 (751)
275 2p4o_A Hypothetical protein; p 98.0 0.0022 7.4E-08 62.5 25.2 208 315-531 21-239 (306)
276 2xzh_A Clathrin heavy chain 1; 98.0 0.011 3.6E-07 57.5 28.9 229 290-527 72-325 (365)
277 3amr_A 3-phytase; beta-propell 98.0 0.0017 6E-08 64.0 23.3 196 329-531 29-260 (355)
278 3sov_A LRP-6, low-density lipo 97.9 0.0018 6E-08 63.7 23.1 206 285-499 35-246 (318)
279 3v9f_A Two-component system se 97.9 0.0053 1.8E-07 68.0 29.6 234 284-531 257-521 (781)
280 2fp8_A Strictosidine synthase; 97.9 0.0032 1.1E-07 61.7 24.7 197 285-490 80-312 (322)
281 3sov_A LRP-6, low-density lipo 97.9 0.0028 9.7E-08 62.2 23.3 216 305-530 12-234 (318)
282 3amr_A 3-phytase; beta-propell 97.8 0.0063 2.2E-07 60.0 24.4 199 295-499 39-272 (355)
283 3kya_A Putative phosphatase; s 97.8 0.0063 2.1E-07 63.2 25.7 240 286-530 140-471 (496)
284 3qqz_A Putative uncharacterize 97.8 0.0016 5.6E-08 61.6 19.5 166 365-531 21-201 (255)
285 2xe4_A Oligopeptidase B; hydro 97.8 0.00085 2.9E-08 74.2 20.4 174 351-530 202-394 (751)
286 3m0c_C LDL receptor, low-densi 97.8 0.012 4.1E-07 65.0 29.3 210 283-499 422-640 (791)
287 1bpo_A Protein (clathrin); cla 97.8 0.039 1.3E-06 55.7 30.9 230 289-527 70-324 (494)
288 2p9w_A MAL S 1 allergenic prot 97.8 0.01 3.4E-07 58.0 24.4 166 280-445 8-216 (334)
289 3m0c_C LDL receptor, low-densi 97.7 0.012 4.2E-07 64.9 27.8 220 298-528 397-626 (791)
290 1k3i_A Galactose oxidase precu 97.7 0.00068 2.3E-08 73.8 17.1 179 340-524 198-420 (656)
291 3sre_A PON1, serum paraoxonase 97.7 0.0092 3.1E-07 59.3 23.3 204 278-489 43-296 (355)
292 2xbg_A YCF48-like protein; pho 97.7 0.052 1.8E-06 53.2 29.1 230 284-531 79-319 (327)
293 2p9w_A MAL S 1 allergenic prot 97.6 0.0052 1.8E-07 60.1 20.2 161 329-492 16-216 (334)
294 2vpj_A Kelch-like protein 12; 97.6 0.0094 3.2E-07 57.5 21.2 218 295-525 14-264 (301)
295 3tc9_A Hypothetical hydrolase; 97.5 0.0038 1.3E-07 64.1 19.1 153 371-531 137-298 (430)
296 4a0p_A LRP6, LRP-6, low-densit 97.5 0.071 2.4E-06 57.4 29.6 219 298-529 8-232 (628)
297 1n7d_A LDL receptor, low-densi 97.4 0.00033 1.1E-08 76.7 10.0 209 285-500 406-623 (699)
298 2xn4_A Kelch-like protein 2; s 97.4 0.018 6E-07 55.6 21.3 215 297-525 17-262 (302)
299 3ei3_A DNA damage-binding prot 97.4 0.039 1.3E-06 63.6 27.3 216 307-529 808-1057(1158)
300 3ii7_A Kelch-like protein 7; p 97.4 0.028 9.5E-07 54.3 22.6 215 298-525 14-258 (306)
301 2ism_A Putative oxidoreductase 97.4 0.059 2E-06 53.5 25.2 233 284-525 30-337 (352)
302 3s94_A LRP-6, low-density lipo 97.4 0.035 1.2E-06 59.7 25.1 207 283-498 38-250 (619)
303 4a0p_A LRP6, LRP-6, low-densit 97.4 0.13 4.5E-06 55.2 29.6 204 284-498 36-244 (628)
304 1n7d_A LDL receptor, low-densi 97.4 0.00094 3.2E-08 73.2 12.3 216 305-530 385-610 (699)
305 4hw6_A Hypothetical protein, I 97.3 0.026 8.8E-07 57.9 22.0 221 264-489 162-431 (433)
306 2xbg_A YCF48-like protein; pho 97.3 0.14 4.8E-06 50.0 25.9 229 284-528 35-273 (327)
307 2vpj_A Kelch-like protein 12; 97.2 0.068 2.3E-06 51.3 22.6 189 295-493 62-280 (301)
308 3ott_A Two-component system se 97.2 0.14 4.8E-06 56.3 27.8 232 284-530 21-256 (758)
309 3kya_A Putative phosphatase; s 97.2 0.12 4.1E-06 53.6 25.1 228 265-496 163-480 (496)
310 3ii7_A Kelch-like protein 7; p 97.2 0.067 2.3E-06 51.5 22.1 189 295-493 55-274 (306)
311 1zgk_A Kelch-like ECH-associat 97.1 0.032 1.1E-06 54.0 19.3 217 295-525 24-273 (308)
312 3s94_A LRP-6, low-density lipo 97.1 0.086 2.9E-06 56.6 24.0 181 305-493 17-204 (619)
313 2be1_A Serine/threonine-protei 97.1 0.013 4.4E-07 57.8 16.0 197 297-496 11-236 (339)
314 3ei3_A DNA damage-binding prot 97.1 0.33 1.1E-05 55.9 29.8 185 284-477 553-753 (1158)
315 2xn4_A Kelch-like protein 2; s 97.0 0.1 3.5E-06 50.1 21.8 189 295-494 61-279 (302)
316 4asc_A Kelch repeat and BTB do 97.0 0.058 2E-06 52.3 19.9 213 298-524 7-253 (315)
317 4asc_A Kelch repeat and BTB do 96.7 0.32 1.1E-05 46.9 22.7 221 265-495 14-281 (315)
318 1zgk_A Kelch-like ECH-associat 96.6 0.14 4.8E-06 49.4 19.4 189 295-494 70-290 (308)
319 3pbp_A Nucleoporin NUP82; beta 96.5 0.081 2.8E-06 53.3 16.8 137 350-487 41-208 (452)
320 1xi4_A Clathrin heavy chain; a 96.5 0.067 2.3E-06 61.7 17.7 215 290-512 71-310 (1630)
321 2woz_A Kelch repeat and BTB do 96.5 0.13 4.4E-06 49.8 18.1 206 307-524 25-263 (318)
322 3a9g_A Putative uncharacterize 96.5 0.78 2.7E-05 45.3 29.4 233 284-522 28-330 (354)
323 2uvk_A YJHT; unknown function, 96.4 0.13 4.4E-06 50.7 18.0 220 295-525 19-327 (357)
324 2g8s_A Glucose/sorbosone dehyd 96.4 0.85 2.9E-05 45.0 25.9 237 284-527 17-347 (353)
325 3sre_A PON1, serum paraoxonase 96.3 0.08 2.7E-06 52.5 15.3 156 372-531 51-249 (355)
326 2woz_A Kelch repeat and BTB do 96.2 0.98 3.4E-05 43.4 23.3 195 292-496 53-292 (318)
327 3a9g_A Putative uncharacterize 96.1 0.24 8.3E-06 49.0 17.7 147 369-520 27-214 (354)
328 1cru_A Protein (soluble quinop 96.1 0.38 1.3E-05 49.4 19.5 109 370-479 26-162 (454)
329 2ism_A Putative oxidoreductase 96.0 0.23 8E-06 49.0 17.2 106 370-478 30-152 (352)
330 2zwa_A Leucine carboxyl methyl 95.7 0.46 1.6E-05 51.6 19.2 198 294-495 396-639 (695)
331 3pbp_A Nucleoporin NUP82; beta 95.6 0.95 3.2E-05 45.6 19.3 142 293-440 29-208 (452)
332 1tl2_A L10, protein (tachylect 95.5 1.4 4.9E-05 40.2 18.3 177 341-527 5-203 (236)
333 2g8s_A Glucose/sorbosone dehyd 95.4 0.19 6.5E-06 49.8 13.7 148 370-519 17-213 (353)
334 3das_A Putative oxidoreductase 95.4 0.62 2.1E-05 45.9 17.2 153 364-520 25-218 (347)
335 2uvk_A YJHT; unknown function, 95.3 0.55 1.9E-05 46.1 16.7 195 295-499 65-350 (357)
336 3sbq_A Nitrous-oxide reductase 95.2 3.4 0.00012 43.0 22.2 229 299-531 73-405 (638)
337 3das_A Putative oxidoreductase 95.2 2.6 8.9E-05 41.4 27.9 241 277-522 24-326 (347)
338 3ott_A Two-component system se 95.2 4.5 0.00015 44.1 29.0 231 285-529 373-622 (758)
339 2xzh_A Clathrin heavy chain 1; 95.1 2.7 9.1E-05 40.9 24.2 183 263-449 86-295 (365)
340 2zwa_A Leucine carboxyl methyl 94.7 1.5 5E-05 47.7 19.4 150 341-493 399-579 (695)
341 1bpo_A Protein (clathrin); cla 94.3 5 0.00017 40.5 26.7 183 263-449 85-294 (494)
342 2be1_A Serine/threonine-protei 94.3 0.28 9.5E-06 48.2 11.3 111 341-451 11-137 (339)
343 1tl2_A L10, protein (tachylect 93.1 1.1 3.9E-05 40.8 12.1 141 286-437 42-203 (236)
344 1xi4_A Clathrin heavy chain; a 93.1 1.9 6.4E-05 50.0 16.3 211 305-531 47-286 (1630)
345 1cru_A Protein (soluble quinop 92.7 9.7 0.00033 38.7 27.5 107 284-390 26-163 (454)
346 3sbq_A Nitrous-oxide reductase 90.6 18 0.00062 37.7 21.6 92 413-504 322-431 (638)
347 3qhy_B Beta-lactamase inhibito 90.4 4.1 0.00014 38.6 13.6 217 286-530 25-242 (282)
348 2wg3_C Hedgehog-interacting pr 86.5 7.2 0.00025 39.9 13.1 111 370-480 13-158 (463)
349 3q6k_A 43.2 kDa salivary prote 85.7 29 0.001 34.2 21.6 172 307-479 124-342 (381)
350 3s25_A Hypothetical 7-bladed b 85.2 26 0.0009 33.3 20.4 123 350-492 88-217 (302)
351 3b7f_A Glycosyl hydrolase, BNR 83.1 37 0.0013 33.3 21.9 69 371-441 177-259 (394)
352 3b7f_A Glycosyl hydrolase, BNR 79.4 49 0.0017 32.3 20.7 181 340-525 22-254 (394)
353 3uc1_A DNA gyrase subunit A; D 79.4 46 0.0016 32.0 23.4 185 340-525 109-321 (327)
354 3no0_A DNA gyrase subunit A; D 77.0 48 0.0016 31.0 20.3 207 278-490 14-245 (276)
355 3kci_A Probable E3 ubiquitin-p 77.0 58 0.002 31.9 23.7 226 297-530 11-289 (389)
356 3s25_A Hypothetical 7-bladed b 73.2 63 0.0022 30.5 27.1 176 290-491 58-255 (302)
357 3qhy_B Beta-lactamase inhibito 72.8 50 0.0017 30.9 13.0 163 349-530 41-203 (282)
358 2wg3_C Hedgehog-interacting pr 71.7 58 0.002 33.0 14.0 109 414-525 14-160 (463)
359 3q6k_A 43.2 kDa salivary prote 69.9 88 0.003 30.8 23.5 169 350-521 123-341 (381)
360 4gq2_M Nucleoporin NUP120; bet 68.3 1.5E+02 0.0053 33.0 23.0 38 462-499 237-274 (950)
361 1zi0_A DNA gyrase subunit A; b 68.0 83 0.0029 29.8 24.2 230 294-527 1-270 (307)
362 4gq2_M Nucleoporin NUP120; bet 65.3 32 0.0011 38.6 11.3 38 286-323 237-274 (950)
363 3l6v_A GYRA, DNA gyrase subuni 62.6 1.2E+02 0.0041 29.7 24.5 151 292-444 3-180 (370)
364 1suu_A DNA gyrase subunit A; t 62.5 1.1E+02 0.0037 29.1 24.5 194 294-490 6-230 (312)
365 4hvt_A Ritya.17583.B, post-pro 60.0 1.9E+02 0.0064 31.1 24.8 230 287-523 131-416 (711)
366 1zi0_A DNA gyrase subunit A; b 55.3 1.4E+02 0.0048 28.2 23.2 150 340-490 109-276 (307)
367 3f7f_A Nucleoporin NUP120; nuc 51.8 61 0.0021 34.8 9.9 38 285-324 222-259 (729)
368 4fhn_B Nucleoporin NUP120; pro 50.5 11 0.00037 43.4 4.3 38 286-323 239-276 (1139)
369 4fhn_B Nucleoporin NUP120; pro 49.3 57 0.002 37.3 10.1 37 463-499 240-276 (1139)
370 3zwu_A Alkaline phosphatase PH 49.0 39 0.0013 35.5 7.9 59 373-431 478-548 (592)
371 3no0_A DNA gyrase subunit A; D 47.3 1.8E+02 0.006 27.0 18.9 157 284-444 67-246 (276)
372 1suu_A DNA gyrase subunit A; t 42.9 2.2E+02 0.0075 26.8 23.7 158 286-444 48-231 (312)
373 1sqj_A OXG-RCBH, oligoxylogluc 42.7 3.6E+02 0.012 29.2 25.8 147 284-434 14-190 (789)
374 4a9v_A PHOX; hydrolase, beta-p 39.3 91 0.0031 32.5 8.7 62 371-432 476-549 (592)
375 3zwu_A Alkaline phosphatase PH 38.5 97 0.0033 32.5 8.9 57 463-520 478-547 (592)
376 4hvt_A Ritya.17583.B, post-pro 38.0 4E+02 0.014 28.4 20.5 225 259-490 151-429 (711)
377 2cn3_A Xyloglucanase, beta-1,4 35.6 4.3E+02 0.015 28.1 25.1 27 286-312 24-51 (737)
378 2cn3_A Xyloglucanase, beta-1,4 31.1 5.1E+02 0.017 27.6 14.9 61 371-432 23-91 (737)
379 3f7f_A Nucleoporin NUP120; nuc 29.4 82 0.0028 33.8 6.6 31 470-500 229-259 (729)
380 1wp5_A Topoisomerase IV; broke 28.9 3.8E+02 0.013 25.4 23.7 103 341-444 107-225 (323)
381 4a9v_A PHOX; hydrolase, beta-p 25.4 2.9E+02 0.01 28.8 9.7 59 463-521 478-549 (592)
382 1wp5_A Topoisomerase IV; broke 24.5 4.5E+02 0.015 24.8 22.8 194 294-490 3-224 (323)
383 3l6v_A GYRA, DNA gyrase subuni 24.0 5E+02 0.017 25.1 24.8 205 284-489 45-314 (370)
384 3uc1_A DNA gyrase subunit A; D 22.9 4.9E+02 0.017 24.6 24.0 228 297-527 4-272 (327)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-39 Score=337.44 Aligned_cols=275 Identities=23% Similarity=0.372 Sum_probs=248.6
Q ss_pred HHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC
Q 009597 247 EYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326 (531)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~ 326 (531)
++...+.+..+++++.++.|++|+..++++++++.+|...|.+++|+|++++|++|+.|++|+|||+.+++++..+..+.
T Consensus 113 ~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 192 (410)
T 1vyh_C 113 RVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192 (410)
T ss_dssp EEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCS
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC
Confidence 44556677788899999999999999999999999999999999999999999999999999999999999998886433
Q ss_pred -cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEE
Q 009597 327 -IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVI 405 (531)
Q Consensus 327 -~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~ 405 (531)
.+.++.+++. +.+|++|+.|++|++||++++.++..+.+|...|.++.|+|++.+|++++.|++|++||+.++...
T Consensus 193 ~~V~~v~~~p~---~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 193 HNVSSVSIMPN---GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269 (410)
T ss_dssp SCEEEEEECSS---SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCEEEEEEeCC---CCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 3455666653 368999999999999999999999999999999999999999999999999999999999998887
Q ss_pred EEeeCCCCCCccEEEEeCC--------------------CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEE
Q 009597 406 KYISEPHMHSMPSISLHPN--------------------TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 465 (531)
Q Consensus 406 ~~~~~~~~~~v~~v~~sp~--------------------~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 465 (531)
..+. .|...|.+++|+|+ +.+|++|+.|+.|++||++++..+ ..+.+|. ..|.+
T Consensus 270 ~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~---~~~~~h~--~~v~~ 343 (410)
T 1vyh_C 270 AELR-EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL---MTLVGHD--NWVRG 343 (410)
T ss_dssp EEEC-CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE---EEEECCS--SCEEE
T ss_pred eEec-CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE---EEEECCC--CcEEE
Confidence 7664 48899999999996 678999999999999999987654 4566674 56999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 466 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 466 l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++|+|+|++|++|+.||.|++||+.+++++..+.+|...|.+++|+| ++.+|++|+.||+|++||
T Consensus 344 v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp EEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECS-SSSCEEEEETTSEEEEEC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEe
Confidence 99999999999999999999999999999999999999999999999 778999999999999997
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.1e-39 Score=324.29 Aligned_cols=276 Identities=18% Similarity=0.296 Sum_probs=241.7
Q ss_pred HHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc----EEEEc
Q 009597 247 EYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ----VIRTF 322 (531)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~----~i~~~ 322 (531)
++.+.++++.+++++.++.+++|+..+++.+..+..|...|.+++|+|++++|++|+.|+.|++|++.++. ....+
T Consensus 60 ~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~ 139 (340)
T 1got_B 60 AMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139 (340)
T ss_dssp EEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEe
Confidence 44566778888999999999999999999999999999999999999999999999999999999998753 34444
Q ss_pred cCCC-cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCC
Q 009597 323 STGK-IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401 (531)
Q Consensus 323 ~~~~-~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~ 401 (531)
..+. ...++.+.+. ..+++++.|+.|++||+++++.+..+.+|.+.|.+++|+|++++|++++.|++|++||+++
T Consensus 140 ~~h~~~v~~~~~~~~----~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~ 215 (340)
T 1got_B 140 AGHTGYLSCCRFLDD----NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215 (340)
T ss_dssp ECCSSCEEEEEEEET----TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cCCCccEEEEEECCC----CcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 3322 2344444432 3599999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC
Q 009597 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE 481 (531)
Q Consensus 402 ~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d 481 (531)
+..+..+. .|...|.+++|+|++++|++++.|++|++||++....+.. +..+.....+.+++|+|+|++|++|+.|
T Consensus 216 ~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~---~~~~~~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 216 GMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMT---YSHDNIICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp CSEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE---ECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeEEEEc-CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEE---EccCCcccceEEEEECCCCCEEEEECCC
Confidence 98877765 4889999999999999999999999999999988754432 2222223458899999999999999999
Q ss_pred CcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 482 GKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 482 g~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|.|++||+.+++.+..+.+|.+.|.+++|+| ++.+|+||+.||.|+|||
T Consensus 292 ~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 292 FNCNVWDALKADRAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred CeEEEEEcccCcEeeEeecCCCcEEEEEEcC-CCCEEEEEcCCccEEecC
Confidence 9999999999999999999999999999999 788999999999999998
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=319.75 Aligned_cols=269 Identities=18% Similarity=0.321 Sum_probs=241.7
Q ss_pred hhccCCCCCCCceeeeeecccCe--eeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC-cce
Q 009597 253 EEKGNAGGEKGEHVEDKSTFHGK--CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPY 329 (531)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~~--~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~-~~~ 329 (531)
.+..+++++.++.+++|+...++ +...+.+|...|.+++|++++.++++++.|++|+|||+.+++++..+..+. ...
T Consensus 47 ~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~ 126 (321)
T 3ow8_A 47 NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW 126 (321)
T ss_dssp --CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCC
T ss_pred CCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEE
Confidence 34568889999999999987665 456789999999999999999999999999999999999999998886543 345
Q ss_pred EEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEee
Q 009597 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYIS 409 (531)
Q Consensus 330 ~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~ 409 (531)
.+.++++ +.+|++|+.+|.|++||+++++....+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.
T Consensus 127 ~~~~spd---g~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~ 203 (321)
T 3ow8_A 127 TLAFSPD---SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE 203 (321)
T ss_dssp CEEECTT---SSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEECCC---CCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc
Confidence 6677664 3689999999999999999999999999999999999999999999999999999999999998887765
Q ss_pred CCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 009597 410 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 489 (531)
Q Consensus 410 ~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~ 489 (531)
.|...|.+++|+|++++|++++.|+.|++||++....+ ..+.+|. ..|.+++|+|++.+|++|+.|+.|+|||+
T Consensus 204 -~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~h~--~~v~~~~~sp~~~~l~s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 204 -GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA---GTLSGHA--SWVLNVAFCPDDTHFVSSSSDKSVKVWDV 277 (321)
T ss_dssp -CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEE---EEECCCS--SCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred -ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCccee---EEEcCCC--CceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 48899999999999999999999999999999886543 4566774 56999999999999999999999999999
Q ss_pred CCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 490 KSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 490 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++++..+.+|.+.|.+++|+| ++.+|++++.||.|+|||
T Consensus 278 ~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 278 GTRTCVHTFFDHQDQVWGVKYNG-NGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp TTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCCEEEEE
T ss_pred CCCEEEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEe
Confidence 99999999999999999999999 788999999999999997
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.8e-38 Score=313.39 Aligned_cols=249 Identities=20% Similarity=0.354 Sum_probs=219.6
Q ss_pred eeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC-cceEEEEccCCCCCcEEEEeeCCCeEE
Q 009597 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLNPDDDKQNILLAGMSDKKIV 353 (531)
Q Consensus 275 ~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~-~~~~~~~~~~~~~~~~l~sg~~dg~I~ 353 (531)
+..++|.+|.+.|++|+|+|++++|++|+.||+|+|||+.++..+..+..+. ....+.|.++ +++|++|+.|+.|+
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIAR---KNWIIVGSDDFRIR 80 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGG---GTEEEEEETTSEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCC---CCEEEEECCCCEEE
Confidence 4578899999999999999999999999999999999999999998887554 3456667664 36899999999999
Q ss_pred EEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeC-CCCEEEEEE
Q 009597 354 QWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQS 432 (531)
Q Consensus 354 iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp-~~~~l~s~s 432 (531)
+||+.+++.+..+.+|.+.|.+++|+|++++|++|+.|++|++||++.+..+......|...|.+++|+| ++.+|++|+
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 9999999999999999999999999999999999999999999999988555555567999999999999 678999999
Q ss_pred cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcC--CCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEE
Q 009597 433 LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP--DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510 (531)
Q Consensus 433 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp--dg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~ 510 (531)
.|++|++||++........ ..++ ...+..+.|+| ++.+|++|+.|+.|++||+++++++..+.+|...|.+++|
T Consensus 161 ~D~~v~iwd~~~~~~~~~~--~~~~--~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~ 236 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTL--TTGQ--ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236 (304)
T ss_dssp TTSEEEEEETTCSSCSEEE--ECCC--TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred CCCeEEEEECCCCCcccee--ccCC--cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEE
Confidence 9999999999876443222 2233 23467788876 7889999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEeCCCCEEeeC
Q 009597 511 HPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 511 ~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+| ++.+|++|+.||.|++||
T Consensus 237 ~p-~~~~l~s~s~Dg~i~iWd 256 (304)
T 2ynn_A 237 HP-TLPIIISGSEDGTLKIWN 256 (304)
T ss_dssp CS-SSSEEEEEETTSCEEEEE
T ss_pred CC-CCCEEEEEcCCCeEEEEE
Confidence 99 778999999999999997
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.3e-37 Score=311.50 Aligned_cols=278 Identities=15% Similarity=0.235 Sum_probs=240.8
Q ss_pred HHHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc------EE
Q 009597 246 EEYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ------VI 319 (531)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~------~i 319 (531)
.++.+.+++..+++++.++.+++|+..+++....+..|...|.+++|+|+|.+|++|+.|+.|++|++.... ..
T Consensus 68 ~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~ 147 (354)
T 2pbi_B 68 LCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 147 (354)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccc
Confidence 345667788889999999999999999999999999999999999999999999999999999999986431 22
Q ss_pred EEcc-CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEec--CCCEEEEEeCCCCEEE
Q 009597 320 RTFS-TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVD--SNRRFVTSSDDKSLRV 396 (531)
Q Consensus 320 ~~~~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp--~~~~l~s~s~Dg~I~i 396 (531)
..+. +......+.|.+. +..|++++.|++|++||+++++++..+.+|...|.+++|+| ++++|++|+.||+|++
T Consensus 148 ~~~~~h~~~v~~~~~~~~---~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~ 224 (354)
T 2pbi_B 148 KSVAMHTNYLSACSFTNS---DMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMV 224 (354)
T ss_dssp EEEEECSSCEEEEEECSS---SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEE
T ss_pred eeeeccCCcEEEEEEeCC---CCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEE
Confidence 2232 2233345555553 35799999999999999999999999999999999999987 5689999999999999
Q ss_pred EEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEE
Q 009597 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 476 (531)
Q Consensus 397 wd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~ 476 (531)
||++++..+..+. .|...|.+++|+|++.+|++++.|++|++||++....+. .+..+.....+.+++|+|+|.+|+
T Consensus 225 wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~---~~~~~~~~~~~~~~~~s~~g~~l~ 300 (354)
T 2pbi_B 225 WDMRSGQCVQAFE-THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVA---IYSKESIIFGASSVDFSLSGRLLF 300 (354)
T ss_dssp EETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---EECCTTCCSCEEEEEECTTSSEEE
T ss_pred EECCCCcEEEEec-CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE---EEcCCCcccceeEEEEeCCCCEEE
Confidence 9999998877764 489999999999999999999999999999998865442 233333234578899999999999
Q ss_pred EEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 477 SGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 477 sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+|+.|+.|++||+.+++.+..+.+|.+.|.+++|+| ++.+|++|+.||+|+|||
T Consensus 301 ~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~sp-dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 301 AGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSP-DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEC
T ss_pred EEECCCcEEEEECCCCceEEEEECCCCcEEEEEECC-CCCEEEEEcCCCCEEecC
Confidence 999999999999999999999999999999999999 788999999999999997
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=9.1e-37 Score=303.65 Aligned_cols=278 Identities=23% Similarity=0.461 Sum_probs=244.0
Q ss_pred HHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC
Q 009597 247 EYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326 (531)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~ 326 (531)
+++..++++.+++++.++.+++|+...++....+.+|...|.+++|+|++++|++|+.|+.|++||+.+++++..+..+.
T Consensus 28 ~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~ 107 (312)
T 4ery_A 28 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS 107 (312)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCC
Confidence 34566777888889999999999999999999999999999999999999999999999999999999999998886543
Q ss_pred -cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEE
Q 009597 327 -IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVI 405 (531)
Q Consensus 327 -~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~ 405 (531)
...++.+.+. +.+|++|+.|+.|++||+++++.+..+..|..+|.+++|+|++++|++++.|+.|++||++++..+
T Consensus 108 ~~v~~~~~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 108 NYVFCCNFNPQ---SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 184 (312)
T ss_dssp SCEEEEEECSS---SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCEEEEEEcCC---CCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee
Confidence 3445566553 468999999999999999999999999999999999999999999999999999999999999888
Q ss_pred EEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEE-cCCCCEEEEEeCCCcE
Q 009597 406 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNF-SPDGRFVMSGDGEGKC 484 (531)
Q Consensus 406 ~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~-spdg~~l~sgs~dg~I 484 (531)
..+...+...+.+++|+|++++|++++.|+.|++||++++..+ ..+.+|..........+ .+++.+|++|+.||.|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i 261 (312)
T 4ery_A 185 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 261 (312)
T ss_dssp EEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE---EEECSSCCSSSCCCEEEECSSSCEEEECCTTSCE
T ss_pred eEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE---EEEEecCCceEEEEEEEEeCCCcEEEEECCCCEE
Confidence 8777667788999999999999999999999999999987554 34555543333333344 4678999999999999
Q ss_pred EEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEe--CCCCEEeeC
Q 009597 485 WFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG--WDGLIKYWD 531 (531)
Q Consensus 485 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s--~Dg~I~iWD 531 (531)
++||+.+++++..+.+|...|.+++|+| ++.+|++++ .|+.|++|+
T Consensus 262 ~vwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 262 YIWNLQTKEIVQKLQGHTDVVISTACHP-TENIIASAALENDKTIKLWK 309 (312)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECS-SSSEEEEEECTTTCCEEEEE
T ss_pred EEEECCCchhhhhhhccCCcEEEEeecC-cCCceEEEEccCCccEEEec
Confidence 9999999999999999999999999999 788899887 699999995
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.6e-37 Score=303.22 Aligned_cols=275 Identities=17% Similarity=0.243 Sum_probs=238.9
Q ss_pred HHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC
Q 009597 247 EYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326 (531)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~ 326 (531)
.++..+++..+++++.++.+++|+..++++++.+.+|..+|.+++|+|++++|++|+.|++|++||+.+++++..+..+.
T Consensus 18 ~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~ 97 (304)
T 2ynn_A 18 GIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP 97 (304)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCC
Confidence 34556777888889999999999999999999999999999999999999999999999999999999999998886543
Q ss_pred -cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC-ceeEEEcccCCCeeEEEEec-CCCEEEEEeCCCCEEEEEcCCCe
Q 009597 327 -IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK-EITQEYDQHLGAVNTITFVD-SNRRFVTSSDDKSLRVWEFGIPV 403 (531)
Q Consensus 327 -~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~-~~~~~~~~h~~~I~~l~~sp-~~~~l~s~s~Dg~I~iwd~~~~~ 403 (531)
.+..+.+++. +.+|++|+.|++|++||++++ .....+.+|...|.+++|+| ++.+|++|+.|++|++||++...
T Consensus 98 ~~v~~~~~~~~---~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 98 DYIRSIAVHPT---KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp SCEEEEEECSS---SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred CcEEEEEEcCC---CCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 3455666664 368999999999999999887 55678899999999999999 67899999999999999998877
Q ss_pred EEEEeeCCCCCCccEEEEeC--CCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC
Q 009597 404 VIKYISEPHMHSMPSISLHP--NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE 481 (531)
Q Consensus 404 ~~~~~~~~~~~~v~~v~~sp--~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d 481 (531)
....+...+...+..+.|+| ++.+|++++.|++|++||++++.++ ..+.+|. ..+.+++|+|++.+|++|+.|
T Consensus 175 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~---~~~~~h~--~~v~~~~~~p~~~~l~s~s~D 249 (304)
T 2ynn_A 175 PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV---ATLEGHM--SNVSFAVFHPTLPIIISGSED 249 (304)
T ss_dssp CSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE---EEEECCS--SCEEEEEECSSSSEEEEEETT
T ss_pred ccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc---eeeCCCC--CCEEEEEECCCCCEEEEEcCC
Confidence 66666666778899999987 6789999999999999999987554 5566774 558899999999999999999
Q ss_pred CcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCC-EEEEEeCCCCEEee
Q 009597 482 GKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS-KVATCGWDGLIKYW 530 (531)
Q Consensus 482 g~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~-~l~t~s~Dg~I~iW 530 (531)
|.|++||+.+++++..+..|...+.+++|+|.+.. ++++|+.||. .+|
T Consensus 250 g~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~-~~~ 298 (304)
T 2ynn_A 250 GTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGF-TVL 298 (304)
T ss_dssp SCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEE-EEE
T ss_pred CeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCce-EEE
Confidence 99999999999999999999999999999995544 5787776664 444
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1e-37 Score=320.40 Aligned_cols=283 Identities=20% Similarity=0.337 Sum_probs=236.8
Q ss_pred HHHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc-------E
Q 009597 246 EEYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ-------V 318 (531)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~-------~ 318 (531)
.++.+.+++..+++++.++.+++|+..+++.+..+.+|...|.+++|+|+|++|++|+.|+.|+||++.+.. .
T Consensus 70 ~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~ 149 (380)
T 3iz6_a 70 YSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPV 149 (380)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTT
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccc
Confidence 455677888889999999999999999999999999999999999999999999999999999999987532 1
Q ss_pred EEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEE-----cccCCCeeEEEEec-CCCEEEEEeCCC
Q 009597 319 IRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY-----DQHLGAVNTITFVD-SNRRFVTSSDDK 392 (531)
Q Consensus 319 i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~-----~~h~~~I~~l~~sp-~~~~l~s~s~Dg 392 (531)
...+ .++...+..+.+.+.....|++|+.|++|++||+++++.+..+ .+|...|.++.|++ ++.+|++|+.|+
T Consensus 150 ~~~~-~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~ 228 (380)
T 3iz6_a 150 SRVL-TGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT 228 (380)
T ss_dssp CCBC-CCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS
T ss_pred eeec-cCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC
Confidence 2222 2333333333333344467999999999999999999998887 67999999999987 889999999999
Q ss_pred CEEEEEcCCC-eEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCC--ccccceEEEEEc
Q 009597 393 SLRVWEFGIP-VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH--IVAGYACQVNFS 469 (531)
Q Consensus 393 ~I~iwd~~~~-~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~--~~~~~v~~l~~s 469 (531)
+|++||++.. ..+..+ ..|...|.+++|+|++.+|++++.|++|++||++++..+......... .....+.+++|+
T Consensus 229 ~v~~wd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 307 (380)
T 3iz6_a 229 TVRLWDLRITSRAVRTY-HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFS 307 (380)
T ss_dssp CEEEEETTTTCCCCEEE-CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEEC
T ss_pred eEEEEECCCCCcceEEE-CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEEC
Confidence 9999999854 444444 459999999999999999999999999999999987665433221111 112347789999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeEEEEe----eccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 470 PDGRFVMSGDGEGKCWFWDWKSCKVFRTL----KCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 470 pdg~~l~sgs~dg~I~iwd~~~~~~~~~~----~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|+|++|++|+.||.|++||+.+++.+..+ .+|.+.|.+++|+| ++.+|+|||.||+|+|||
T Consensus 308 ~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 308 ISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSS-DGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp SSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECS-SSSEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECC-CCCEEEEeeCCCCEEEEe
Confidence 99999999999999999999999988877 68999999999999 888999999999999996
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.7e-37 Score=310.18 Aligned_cols=274 Identities=16% Similarity=0.238 Sum_probs=219.2
Q ss_pred HHHHhhhhccCCCCCCCceeeeeecc-----------cCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCC
Q 009597 247 EYAKKKEEKGNAGGEKGEHVEDKSTF-----------HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET 315 (531)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t 315 (531)
.++.++++.++++++ +..+++|+.. ..........|...|.+++|+|++ .|++|+.||+|+|||+.+
T Consensus 35 ~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~ 112 (344)
T 4gqb_B 35 AARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVELWELDE 112 (344)
T ss_dssp EEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECT
T ss_pred EEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccC
Confidence 445677887777655 4455666421 011112223467789999999986 688999999999999999
Q ss_pred CcEEEEcc---CCC--cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCC-CEEEEEe
Q 009597 316 GQVIRTFS---TGK--IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN-RRFVTSS 389 (531)
Q Consensus 316 ~~~i~~~~---~~~--~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~-~~l~s~s 389 (531)
++.+..+. .+| .+.++.|+++ +.+|++|+.|++|++||+++++++..+.+|.+.|.+++|++++ .+|++++
T Consensus 113 ~~~~~~~~~~~~~H~~~V~~v~~spd---g~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s 189 (344)
T 4gqb_B 113 NETLIVSKFCKYEHDDIVSTVSVLSS---GTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCS 189 (344)
T ss_dssp TSSCEEEEEEEECCSSCEEEEEECTT---SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCceeEeeccccCCCCCEEEEEECCC---CCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeec
Confidence 87654432 233 3455666553 4689999999999999999999999999999999999999987 4789999
Q ss_pred CCCCEEEEEcCCCeEEEEeeC-CCCCCccEEEEeC-CCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEE
Q 009597 390 DDKSLRVWEFGIPVVIKYISE-PHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 467 (531)
Q Consensus 390 ~Dg~I~iwd~~~~~~~~~~~~-~~~~~v~~v~~sp-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~ 467 (531)
.|++|+|||+++++....+.. .+...+.+++|+| ++++|++|+.||+|+|||++++..+ ..+.+|. ..|.+++
T Consensus 190 ~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~---~~~~~h~--~~v~~v~ 264 (344)
T 4gqb_B 190 EDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV---LSSAVHS--QCVTGLV 264 (344)
T ss_dssp TTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC---EEEECCS--SCEEEEE
T ss_pred cccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE---EEEcCCC--CCEEEEE
Confidence 999999999999887776643 3556789999999 5678899999999999999987554 4566774 5599999
Q ss_pred EcCCC-CEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 468 FSPDG-RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 468 ~spdg-~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|+|++ ++|++|+.|++|+|||+.+++++ .+.+|.+.|.+++|+|++..+|+|||.||+|++|+
T Consensus 265 fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 265 FSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence 99998 58999999999999999998865 46789999999999997677889999999999995
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3e-36 Score=312.71 Aligned_cols=246 Identities=21% Similarity=0.357 Sum_probs=222.0
Q ss_pred eeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC-cceEEEEccCCCCCcEEEEeeCCCeEEE
Q 009597 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLNPDDDKQNILLAGMSDKKIVQ 354 (531)
Q Consensus 276 ~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~-~~~~~~~~~~~~~~~~l~sg~~dg~I~i 354 (531)
....+.+|..+|++++|+|++.+|++|+.||+|+|||+.+++.+..+..+. .+..+.|+++ +.+|++|+.|++|++
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~---~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS---GKLLASCSADMTIKL 176 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTT---SSEEEEEETTSCCCE
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCC---CCEEEEEeCCCeEEE
Confidence 356788999999999999999999999999999999999999998886543 3455666553 468999999999999
Q ss_pred EECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcC
Q 009597 355 WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD 434 (531)
Q Consensus 355 wd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~D 434 (531)
||+.+++++..+.+|...|.+++|+|++++|++++.|++|++||++++..+..+. .|...|.++.++|++.+|++++.|
T Consensus 177 wd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 177 WDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp EETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSSEEEEEETT
T ss_pred EeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-CCCccEEEEEECCCCCEEEEEcCC
Confidence 9999999999999999999999999999999999999999999999998887775 488999999999999999999999
Q ss_pred CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCC--------------------CCEEEEEeCCCcEEEEECCCCeE
Q 009597 435 NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD--------------------GRFVMSGDGEGKCWFWDWKSCKV 494 (531)
Q Consensus 435 g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd--------------------g~~l~sgs~dg~I~iwd~~~~~~ 494 (531)
++|++||+.+.... ..+.+|. ..+.+++|+|+ |.+|++|+.||.|++||++++++
T Consensus 256 ~~v~vwd~~~~~~~---~~~~~h~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~ 330 (410)
T 1vyh_C 256 QTVRVWVVATKECK---AELREHR--HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330 (410)
T ss_dssp SCEEEEETTTCCEE---EEECCCS--SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE
T ss_pred CeEEEEECCCCcee---eEecCCC--ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCce
Confidence 99999999887544 4455664 55899999996 67999999999999999999999
Q ss_pred EEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 495 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 495 ~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+..+.+|...|.+++|+| ++.+|++|+.||.|++||
T Consensus 331 ~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd 366 (410)
T 1vyh_C 331 LMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWD 366 (410)
T ss_dssp EEEEECCSSCEEEEEECS-SSSCEEEEETTTEEEEEC
T ss_pred EEEEECCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEE
Confidence 999999999999999999 888999999999999998
No 11
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.7e-36 Score=298.62 Aligned_cols=250 Identities=18% Similarity=0.301 Sum_probs=215.6
Q ss_pred cCeeeEEecCccCceEEEEEccC----CCEEEEEecCCeEEEEeCCCCcEEE--EccCCCcceEEEEccCCCCCcEEEEe
Q 009597 273 HGKCMRTYMGHSKAVRDISFCND----GTKFLTASYDKNIKYWDTETGQVIR--TFSTGKIPYVVKLNPDDDKQNILLAG 346 (531)
Q Consensus 273 ~~~~~~~l~gH~~~V~~l~fspd----g~~l~s~s~Dg~I~vWd~~t~~~i~--~~~~~~~~~~~~~~~~~~~~~~l~sg 346 (531)
.+.+.+.+.+|.+.|++|+|+|+ +.+|+||+.|++|+||++.++.... .+. ++...+.++.+.+ ...+++++
T Consensus 21 ~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~-gh~~~v~~~~~~~-~~~~l~s~ 98 (321)
T 3ow8_A 21 YGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLE-GHQLGVVSVDISH-TLPIAASS 98 (321)
T ss_dssp CEEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECS-SSSEEEEE
T ss_pred hhheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeec-cCCCCEEEEEECC-CCCEEEEE
Confidence 35667788999999999999984 5689999999999999998776533 333 3333333333333 23689999
Q ss_pred eCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCC
Q 009597 347 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN 426 (531)
Q Consensus 347 ~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 426 (531)
+.|++|++||+.+++.+..+..|...+.+++|+|++++|++++.|+.|++||++.+.....+.. +...|.+++|+|+++
T Consensus 99 s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~-~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 99 SLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT-RGKFILSIAYSPDGK 177 (321)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEEC-SSSCEEEEEECTTSS
T ss_pred eCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecC-CCceEEEEEECCCCC
Confidence 9999999999999999999999999999999999999999999999999999999887766654 778899999999999
Q ss_pred EEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEE
Q 009597 427 WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 506 (531)
Q Consensus 427 ~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~ 506 (531)
+|++++.|+.|++||++++..+ ..+.+|. ..|.+++|+|++++|++|+.||.|+|||+++++++..+.+|...|.
T Consensus 178 ~lasg~~dg~i~iwd~~~~~~~---~~~~~h~--~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~ 252 (321)
T 3ow8_A 178 YLASGAIDGIINIFDIATGKLL---HTLEGHA--MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 252 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEE---EEECCCS--SCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEEEcCCCeEEEEECCCCcEE---EEEcccC--CceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceE
Confidence 9999999999999999987554 4456664 4588899999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 507 GCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 507 ~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+++|+| ++.+|++++.||+|++||
T Consensus 253 ~~~~sp-~~~~l~s~s~D~~v~iwd 276 (321)
T 3ow8_A 253 NVAFCP-DDTHFVSSSSDKSVKVWD 276 (321)
T ss_dssp EEEECT-TSSEEEEEETTSCEEEEE
T ss_pred EEEECC-CCCEEEEEeCCCcEEEEe
Confidence 999999 788999999999999997
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.4e-35 Score=302.95 Aligned_cols=279 Identities=19% Similarity=0.315 Sum_probs=233.0
Q ss_pred HHHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccC------------------ceEEEEEccCCCEEEEEecCCe
Q 009597 246 EEYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSK------------------AVRDISFCNDGTKFLTASYDKN 307 (531)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~------------------~V~~l~fspdg~~l~s~s~Dg~ 307 (531)
.+++++++++.++++. ++.+.+|+...++.+..+.+|.. .|++++|+|+|++|++|+.|+.
T Consensus 68 ~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~ 146 (393)
T 1erj_A 68 CCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRL 146 (393)
T ss_dssp CEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCe
Confidence 3445667777777765 56889999999999999887753 3999999999999999999999
Q ss_pred EEEEeCCCCcEEEEccCCC-cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEec-CCCEE
Q 009597 308 IKYWDTETGQVIRTFSTGK-IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVD-SNRRF 385 (531)
Q Consensus 308 I~vWd~~t~~~i~~~~~~~-~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp-~~~~l 385 (531)
|+|||+.+++.+..+..+. .+..+.|.++ +.+|++|+.|++|++||++++++...+. +...+.+++|+| ++++|
T Consensus 147 i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~---~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 147 IRIWDIENRKIVMILQGHEQDIYSLDYFPS---GDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTT---SSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEE
T ss_pred EEEEECCCCcEEEEEccCCCCEEEEEEcCC---CCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEE
Confidence 9999999999988886443 3455666553 3689999999999999999999888776 557899999999 89999
Q ss_pred EEEeCCCCEEEEEcCCCeEEEEee------CCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCccee---------ce
Q 009597 386 VTSSDDKSLRVWEFGIPVVIKYIS------EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL---------NK 450 (531)
Q Consensus 386 ~s~s~Dg~I~iwd~~~~~~~~~~~------~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~---------~~ 450 (531)
++++.|+.|++||++++..+..+. ..|...|.+++|+|++.+|++++.|+.|++||++..... ..
T Consensus 223 ~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~ 302 (393)
T 1erj_A 223 AAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 302 (393)
T ss_dssp EEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CE
T ss_pred EEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcc
Confidence 999999999999999987776652 358889999999999999999999999999999764321 12
Q ss_pred eeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecC-----CCCEEEEEeCCC
Q 009597 451 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPL-----EQSKVATCGWDG 525 (531)
Q Consensus 451 ~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~-----~~~~l~t~s~Dg 525 (531)
...+.+|. ..|.+++|+|++.+|++|+.||.|++||+.+++++..+.+|...|.+++|++. ++.+|+||+.||
T Consensus 303 ~~~~~~h~--~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg 380 (393)
T 1erj_A 303 EVTYIGHK--DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDC 380 (393)
T ss_dssp EEEEECCS--SCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTS
T ss_pred eEEEeccc--CcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCC
Confidence 23455664 56899999999999999999999999999999999999999999999999872 467899999999
Q ss_pred CEEeeC
Q 009597 526 LIKYWD 531 (531)
Q Consensus 526 ~I~iWD 531 (531)
+|+|||
T Consensus 381 ~i~iW~ 386 (393)
T 1erj_A 381 KARIWK 386 (393)
T ss_dssp EEEEEE
T ss_pred cEEECc
Confidence 999996
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=298.66 Aligned_cols=279 Identities=16% Similarity=0.237 Sum_probs=226.2
Q ss_pred HHHhhhhccCCCCCCCceeeeeecccCeeeE---EecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc--EEEEc
Q 009597 248 YAKKKEEKGNAGGEKGEHVEDKSTFHGKCMR---TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ--VIRTF 322 (531)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~--~i~~~ 322 (531)
+++.++++.+++++.++.|++|+...++... ...+|...|.+++|+|++++|++|+.|++|+||++.++. ++..+
T Consensus 22 l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 101 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101 (345)
T ss_dssp EEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEc
Confidence 4567788889999999999999988776432 337899999999999999999999999999999988764 45666
Q ss_pred cCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc---eeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEE
Q 009597 323 STG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE---ITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWE 398 (531)
Q Consensus 323 ~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~---~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd 398 (531)
..+ ..+..+.|+++ +.+|++|+.|+.|++||++++. ++..+..|...|.+++|+|++++|++++.|++|++||
T Consensus 102 ~~h~~~v~~v~~sp~---~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~ 178 (345)
T 3fm0_A 102 EGHENEVKSVAWAPS---GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYR 178 (345)
T ss_dssp CCCSSCEEEEEECTT---SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred cCCCCCceEEEEeCC---CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 433 33455666653 4689999999999999998763 4667889999999999999999999999999999999
Q ss_pred cCCCeEE-EEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCccee------------ceeeeecC-CccccceE
Q 009597 399 FGIPVVI-KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL------------NKKKRFAG-HIVAGYAC 464 (531)
Q Consensus 399 ~~~~~~~-~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~------------~~~~~~~~-~~~~~~v~ 464 (531)
++.+... ......|...|.+++|+|++++|++++.|++|+||+....... .....+.+ | ...|.
T Consensus 179 ~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~ 256 (345)
T 3fm0_A 179 EEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFH--SRTIY 256 (345)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSC--SSCEE
T ss_pred ecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCC--CCcEE
Confidence 9887533 2233568999999999999999999999999999997432111 11122333 3 35688
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCe---------EEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 465 QVNFSPDGRFVMSGDGEGKCWFWDWKSCK---------VFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 465 ~l~~spdg~~l~sgs~dg~I~iwd~~~~~---------~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+++|+|++.+|++++.|+.|++|+..... ......+|...|.+++|+|.+..+|++||.||.|++||
T Consensus 257 ~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~ 332 (345)
T 3fm0_A 257 DIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332 (345)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEE
Confidence 99999999999999999999999986542 12234589999999999995557999999999999996
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.9e-35 Score=291.94 Aligned_cols=264 Identities=17% Similarity=0.350 Sum_probs=226.5
Q ss_pred ccCCCCCCCceeeeeeccc-----CeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC-cc
Q 009597 255 KGNAGGEKGEHVEDKSTFH-----GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IP 328 (531)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~~-----~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~-~~ 328 (531)
..+++++.++.+++|+... +.+++.+.+|...|.+++|+|++++|++|+.|++|+|||+.+++++..+..+. .+
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v 110 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV 110 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred cEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcE
Confidence 5678889999999998653 46788999999999999999999999999999999999999999998886443 34
Q ss_pred eEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecC------CCEEEEEeCCCCEEEEEcCCC
Q 009597 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS------NRRFVTSSDDKSLRVWEFGIP 402 (531)
Q Consensus 329 ~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~------~~~l~s~s~Dg~I~iwd~~~~ 402 (531)
..+.+.+. +.+|++|+.|++|++||++ +..+..+.+|...|.++.|+|. +..|++++.|+.|++||++..
T Consensus 111 ~~~~~~~~---~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 186 (319)
T 3frx_A 111 MSVDIDKK---ASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF 186 (319)
T ss_dssp EEEEECTT---SCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEcCC---CCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc
Confidence 45555553 4689999999999999996 5678888999999999999985 448999999999999999998
Q ss_pred eEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCC
Q 009597 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG 482 (531)
Q Consensus 403 ~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg 482 (531)
.....+. .|...|.+++|+|++++|++++.||.|++||+.++..+.. +..+ ..+.+++|+|++.+|++++.+
T Consensus 187 ~~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~---~~~~---~~v~~~~~sp~~~~la~~~~~- 258 (319)
T 3frx_A 187 QIEADFI-GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYT---LSAQ---DEVFSLAFSPNRYWLAAATAT- 258 (319)
T ss_dssp EEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE---EECC---SCEEEEEECSSSSEEEEEETT-
T ss_pred hhheeec-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE---ecCC---CcEEEEEEcCCCCEEEEEcCC-
Confidence 8776664 5899999999999999999999999999999998765533 3333 458899999999999988765
Q ss_pred cEEEEECCCCeEEEEeec--------cCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 483 KCWFWDWKSCKVFRTLKC--------HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 483 ~I~iwd~~~~~~~~~~~~--------h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++|++.....+..+.. |...+.+++|+| ++.+|++|+.||.|+|||
T Consensus 259 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 259 GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSA-DGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECC-CCCEEEEeecCceEEEEE
Confidence 599999998887776643 456789999999 888999999999999997
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.1e-36 Score=307.99 Aligned_cols=276 Identities=18% Similarity=0.278 Sum_probs=220.7
Q ss_pred HHHHHhhhhccCCCCCC------CceeeeeecccCeee----EEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCC
Q 009597 246 EEYAKKKEEKGNAGGEK------GEHVEDKSTFHGKCM----RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET 315 (531)
Q Consensus 246 ~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~----~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t 315 (531)
.+++.+++++.+++++. ++.+++|+...+... ....+|...|.+++|+|++. +++++.||+|+|||+.+
T Consensus 46 ~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~ 124 (357)
T 4g56_B 46 GAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILE 124 (357)
T ss_dssp EEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC----
T ss_pred EEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccc
Confidence 45567888888887766 667888887665543 34467999999999999985 66788899999999998
Q ss_pred CcEEEEcc-----CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCC-EEEEEe
Q 009597 316 GQVIRTFS-----TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNR-RFVTSS 389 (531)
Q Consensus 316 ~~~i~~~~-----~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~-~l~s~s 389 (531)
++.+.... +...+.++.|+++ +.+|++|+.|+.|++||+++++++..+..|...|++++|++++. +|++++
T Consensus 125 ~~~~~~~~~~~~~h~~~V~~v~~spd---g~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~ 201 (357)
T 4g56_B 125 KESLLVNKFAKYEHDDIVKTLSVFSD---GTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCG 201 (357)
T ss_dssp ----CCCCEEECCCSSCEEEEEECSS---SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEE
T ss_pred cceeEEEeeccCCCCCCEEEEEECCC---CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeec
Confidence 87653322 2233455666553 46899999999999999999999999999999999999999875 789999
Q ss_pred CCCCEEEEEcCCCeEEEEee-CCCCCCccEEEEeCC-CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEE
Q 009597 390 DDKSLRVWEFGIPVVIKYIS-EPHMHSMPSISLHPN-TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 467 (531)
Q Consensus 390 ~Dg~I~iwd~~~~~~~~~~~-~~~~~~v~~v~~sp~-~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~ 467 (531)
.|++|++||++++.....+. ..+...+.+++|+|+ +.+|++|+.|+.|++||++++..+ ..+.+|. ..|.+++
T Consensus 202 ~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~---~~~~~~~--~~v~~l~ 276 (357)
T 4g56_B 202 EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSA---QTSAVHS--QNITGLA 276 (357)
T ss_dssp TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGC---EEECCCS--SCEEEEE
T ss_pred cCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEe---EEEeccc--eeEEEEE
Confidence 99999999999887665543 345677999999996 578999999999999999987554 4556664 5589999
Q ss_pred EcCCC-CEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 468 FSPDG-RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 468 ~spdg-~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|+|++ ++|++|+.||+|+|||+++++++..+ +|.+.|.+++|+|.++.+|+|||.||+|++||
T Consensus 277 ~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 277 YSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEE
Confidence 99987 68999999999999999999988765 79999999999997788999999999999996
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.4e-34 Score=290.56 Aligned_cols=248 Identities=21% Similarity=0.332 Sum_probs=216.7
Q ss_pred cCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCc-ceEEEEccCCCCCcEEEEeeCCCe
Q 009597 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI-PYVVKLNPDDDKQNILLAGMSDKK 351 (531)
Q Consensus 273 ~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~-~~~~~~~~~~~~~~~l~sg~~dg~ 351 (531)
..+..+++.+|.+.|.+++|+|++++|++|+.||+|+|||+.+++.+..+..+.. +..+.++++ +.+|++|+.|+.
T Consensus 44 ~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~s~~~d~~ 120 (340)
T 1got_B 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS---GNYVACGGLDNI 120 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTT---SSEEEEEETTCE
T ss_pred cchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCC---CCEEEEEeCCCe
Confidence 4567889999999999999999999999999999999999999999888865433 445556553 468999999999
Q ss_pred EEEEECCCC----ceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCE
Q 009597 352 IVQWDMNTK----EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW 427 (531)
Q Consensus 352 I~iwd~~t~----~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 427 (531)
|++|++.+. .....+.+|.+.|.++.|++++. +++++.|++|++||+.++..+..+. .|...|.+++|+|++.+
T Consensus 121 v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~ 198 (340)
T 1got_B 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFT-GHTGDVMSLSLAPDTRL 198 (340)
T ss_dssp EEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSE
T ss_pred EEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEc-CCCCceEEEEECCCCCE
Confidence 999999875 35667889999999999998765 8999999999999999998887765 48899999999999999
Q ss_pred EEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec--cCCcE
Q 009597 428 LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC--HEGVC 505 (531)
Q Consensus 428 l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~--h~~~V 505 (531)
|++++.|+.|++||++++..+ ..+.+|. ..|.+++|+|++.+|++|+.||.|++||+++++.+..+.. +...|
T Consensus 199 l~sg~~d~~v~~wd~~~~~~~---~~~~~h~--~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v 273 (340)
T 1got_B 199 FVSGACDASAKLWDVREGMCR---QTFTGHE--SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273 (340)
T ss_dssp EEEEETTSCEEEEETTTCSEE---EEECCCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred EEEEeCCCcEEEEECCCCeeE---EEEcCCc--CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccce
Confidence 999999999999999987544 4566674 5599999999999999999999999999999988877753 33479
Q ss_pred EEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 506 IGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 506 ~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++|+| ++.+|++|+.||.|++||
T Consensus 274 ~~~~~s~-~g~~l~~g~~d~~i~vwd 298 (340)
T 1got_B 274 TSVSFSK-SGRLLLAGYDDFNCNVWD 298 (340)
T ss_dssp EEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred EEEEECC-CCCEEEEECCCCeEEEEE
Confidence 9999999 888999999999999997
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.2e-35 Score=319.04 Aligned_cols=275 Identities=17% Similarity=0.295 Sum_probs=226.8
Q ss_pred HHhhhhc-cCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccC---
Q 009597 249 AKKKEEK-GNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--- 324 (531)
Q Consensus 249 ~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~--- 324 (531)
...+++. .+++++.++.+++|+...++++.++.+|...|.+++|+|+|++|++|+.|++|+|||+.+++++..+..
T Consensus 154 ~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~ 233 (611)
T 1nr0_A 154 DFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL 233 (611)
T ss_dssp EECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccc
Confidence 3444444 477888999999999999999999999999999999999999999999999999999999999988842
Q ss_pred ---CCc--ceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeE-----------------------------------
Q 009597 325 ---GKI--PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ----------------------------------- 364 (531)
Q Consensus 325 ---~~~--~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~----------------------------------- 364 (531)
++. +..+.|+++ +.+|++++.|++|++||+.+++++.
T Consensus 234 ~~~~h~~~V~~v~~spd---g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~ 310 (611)
T 1nr0_A 234 KNVAHSGSVFGLTWSPD---GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 310 (611)
T ss_dssp SSCSSSSCEEEEEECTT---SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEE
T ss_pred cccccCCCEEEEEECCC---CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEe
Confidence 333 445555553 4689999999999999998876543
Q ss_pred --------EEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeC--------------------------
Q 009597 365 --------EYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISE-------------------------- 410 (531)
Q Consensus 365 --------~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~-------------------------- 410 (531)
.+.+|...|.+++|+|++++|++++.|++|++||+.++.....+..
T Consensus 311 ~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v 390 (611)
T 1nr0_A 311 PELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHL 390 (611)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEE
T ss_pred CCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCce
Confidence 3457889999999999999999999999999999876544322100
Q ss_pred -------------------------------------------------------CCCCCccEEEEeCCCCEEEEEEcCC
Q 009597 411 -------------------------------------------------------PHMHSMPSISLHPNTNWLAAQSLDN 435 (531)
Q Consensus 411 -------------------------------------------------------~~~~~v~~v~~sp~~~~l~s~s~Dg 435 (531)
.+...+.+++|+|++++|++|+.|+
T Consensus 391 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~ 470 (611)
T 1nr0_A 391 KVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDS 470 (611)
T ss_dssp EEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTS
T ss_pred EEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCC
Confidence 0123467899999999999999999
Q ss_pred eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCC-CeEEEE--eeccCCcEEEEEEec
Q 009597 436 QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS-CKVFRT--LKCHEGVCIGCEWHP 512 (531)
Q Consensus 436 ~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~-~~~~~~--~~~h~~~V~~v~~~p 512 (531)
+|++||+...... .... .+| ...|.+++|+|+|++|++++.|+.|++||+.+ ++++.. +.+|...|.+++|+|
T Consensus 471 ~v~lwd~~~~~~~-~~~~-~~h--~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fsp 546 (611)
T 1nr0_A 471 KVHVYKLSGASVS-EVKT-IVH--PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP 546 (611)
T ss_dssp EEEEEEEETTEEE-EEEE-EEC--SSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECT
T ss_pred eEEEEEccCCcee-eeec-cCC--CCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECC
Confidence 9999999765321 1222 345 45699999999999999999999999999987 666554 345999999999999
Q ss_pred CCCCEEEEEeCCCCEEeeC
Q 009597 513 LEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 513 ~~~~~l~t~s~Dg~I~iWD 531 (531)
++.+|++|+.|++|+|||
T Consensus 547 -dg~~lasgs~D~~v~lW~ 564 (611)
T 1nr0_A 547 -DNVRLATGSLDNSVIVWN 564 (611)
T ss_dssp -TSSEEEEEETTSCEEEEE
T ss_pred -CCCEEEEEECCCcEEEEE
Confidence 888999999999999997
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.7e-35 Score=295.03 Aligned_cols=241 Identities=18% Similarity=0.259 Sum_probs=196.1
Q ss_pred CccCceEEEEEccCCCEEEEEecCCeEEEEeCCC------------CcEEEEccCCCcceEEEEccCCCCCcEEEEeeCC
Q 009597 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET------------GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 349 (531)
Q Consensus 282 gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t------------~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 349 (531)
.|...|.+++|+|||++|++++ |+++++||... +.+...+.....+..+.|.++ ..|++|+.|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d----~~l~~~s~d 102 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE----RGILVASDS 102 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT----TEEEEEETT
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC----CeEEEEECC
Confidence 4777899999999999988887 77888887321 112222223334555666653 468899999
Q ss_pred CeEEEEECCCCceeEE----EcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCC
Q 009597 350 KKIVQWDMNTKEITQE----YDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNT 425 (531)
Q Consensus 350 g~I~iwd~~t~~~~~~----~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~ 425 (531)
|.|+|||+.+++.+.. +.+|.+.|++|+|+|++++|++|+.|++|+|||+.++..+..+. .|...|.+++|+|++
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~-~h~~~V~~~~~~~~~ 181 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR-AHAAQVTCVAASPHK 181 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECSSC
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-CcCCceEEEEecCCC
Confidence 9999999999876543 35899999999999999999999999999999999999887775 499999999999987
Q ss_pred -CEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeEEEEeeccCC
Q 009597 426 -NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD-GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503 (531)
Q Consensus 426 -~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd-g~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~ 503 (531)
.+|++++.|++|++||++++..... +..+.....+.+++|+|+ +.+|++|+.||.|+|||+++++++..+.+|..
T Consensus 182 ~~~l~s~s~D~~v~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~ 258 (344)
T 4gqb_B 182 DSVFLSCSEDNRILLWDTRCPKPASQ---IGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ 258 (344)
T ss_dssp TTEEEEEETTSCEEEEETTSSSCEEE---CC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS
T ss_pred CCceeeeccccccccccccccceeee---eecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC
Confidence 5789999999999999998765533 222333455888999994 67899999999999999999999999999999
Q ss_pred cEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 504 VCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 504 ~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.|.+++|+|++..+|++|+.||+|+|||
T Consensus 259 ~v~~v~fsp~g~~~lasgs~D~~i~vwd 286 (344)
T 4gqb_B 259 CVTGLVFSPHSVPFLASLSEDCSLAVLD 286 (344)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred CEEEEEEccCCCeEEEEEeCCCeEEEEE
Confidence 9999999996667899999999999998
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.9e-34 Score=285.71 Aligned_cols=251 Identities=20% Similarity=0.284 Sum_probs=204.2
Q ss_pred eEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCC--CcEEEEccCCC-cceEEEEccCCCCCcEEEEeeCCCeEE
Q 009597 277 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET--GQVIRTFSTGK-IPYVVKLNPDDDKQNILLAGMSDKKIV 353 (531)
Q Consensus 277 ~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t--~~~i~~~~~~~-~~~~~~~~~~~~~~~~l~sg~~dg~I~ 353 (531)
+..+.+|...|++++|+|+|++|++|+.|++|+|||+.+ .+++.++..+. .+..+.|.+. ..+.+|++|+.|++|+
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~-~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVM 80 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCG-GGCSEEEEEETTTEEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCC-CcCCEEEEEcCCCEEE
Confidence 456889999999999999999999999999999999974 35667775433 2344555432 1247899999999999
Q ss_pred EEECCCCc--eeEEEcccCCCeeEEEEecC--CCEEEEEeCCCCEEEEEcCCCeE-EEEeeCCCCCCccEEEEeCC----
Q 009597 354 QWDMNTKE--ITQEYDQHLGAVNTITFVDS--NRRFVTSSDDKSLRVWEFGIPVV-IKYISEPHMHSMPSISLHPN---- 424 (531)
Q Consensus 354 iwd~~t~~--~~~~~~~h~~~I~~l~~sp~--~~~l~s~s~Dg~I~iwd~~~~~~-~~~~~~~~~~~v~~v~~sp~---- 424 (531)
+||+++++ .+..+..|...|.+++|+|+ +.+|++++.|++|++||++.... .......|...|.+++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99998874 56778889999999999997 88999999999999999987531 12233458899999999996
Q ss_pred ---------CCEEEEEEcCCeEEEEEcCCcce-eceeeeecCCccccceEEEEEcCCC---CEEEEEeCCCcEEEEECCC
Q 009597 425 ---------TNWLAAQSLDNQILIYSTRERFQ-LNKKKRFAGHIVAGYACQVNFSPDG---RFVMSGDGEGKCWFWDWKS 491 (531)
Q Consensus 425 ---------~~~l~s~s~Dg~I~iwd~~~~~~-~~~~~~~~~~~~~~~v~~l~~spdg---~~l~sgs~dg~I~iwd~~~ 491 (531)
+++|++++.|++|++||++.... ......+.+|. ..|.+++|+|++ .+|++++.|++|+|||+.+
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~--~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC--CceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 57999999999999999987542 12334577774 569999999984 8999999999999999876
Q ss_pred Ce---EEEEe--eccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 492 CK---VFRTL--KCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 492 ~~---~~~~~--~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.. ....+ ..|...|.+++|+| ++.+|++++.||.|+||+
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEETTSCEEEEE
T ss_pred CCCccceeeeecccCCCcEEEEEECC-CCCEEEEEcCCCcEEEEE
Confidence 42 22233 46788999999999 788999999999999996
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.6e-34 Score=288.71 Aligned_cols=266 Identities=19% Similarity=0.345 Sum_probs=216.9
Q ss_pred hhccCCCCCCCceeeeeeccc-------CeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC
Q 009597 253 EEKGNAGGEKGEHVEDKSTFH-------GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG 325 (531)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~-------~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~ 325 (531)
++..+++++.++.|++|+... +.+...+.+|...|.+++|+|++.+|++|+.|++|+|||+.+++++..+..+
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 566788899999999999753 4677899999999999999999999999999999999999999999888643
Q ss_pred -CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEc---ccCCCeeEEEEecCC----------CEEEEEeCC
Q 009597 326 -KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYD---QHLGAVNTITFVDSN----------RRFVTSSDD 391 (531)
Q Consensus 326 -~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~---~h~~~I~~l~~sp~~----------~~l~s~s~D 391 (531)
..+..+.|+++ +.+|++|+.|+.|++||+... ...... .|...|.+++|+|++ .+|++++.|
T Consensus 118 ~~~v~~v~~sp~---~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d 193 (343)
T 2xzm_R 118 QSEVYSVAFSPD---NRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD 193 (343)
T ss_dssp CSCEEEEEECSS---TTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT
T ss_pred CCcEEEEEECCC---CCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC
Confidence 33455666664 368999999999999999843 333333 688999999999987 789999999
Q ss_pred CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCC
Q 009597 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 471 (531)
Q Consensus 392 g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd 471 (531)
+.|++||.. ......+ ..|...|.+++|+|++++|++++.|+.|++||+....... ..+. + ...+.+++|+|+
T Consensus 194 ~~i~iwd~~-~~~~~~~-~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~--~~~~-~--~~~v~~v~~sp~ 266 (343)
T 2xzm_R 194 GRLKVWNTN-FQIRYTF-KAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ--REFD-A--GSTINQIAFNPK 266 (343)
T ss_dssp SEEEEEETT-TEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS--EEEE-C--SSCEEEEEECSS
T ss_pred CEEEEEcCC-CceeEEE-cCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc--eeec-C--CCcEEEEEECCC
Confidence 999999954 4444444 3588999999999999999999999999999995432221 1221 1 234889999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEE--Eee-----------ccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 472 GRFVMSGDGEGKCWFWDWKSCKVFR--TLK-----------CHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 472 g~~l~sgs~dg~I~iwd~~~~~~~~--~~~-----------~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+.+|++| .|+.|++||+.+++... .+. +|...|.+++|+| ++.+|++|+.||.|++||
T Consensus 267 ~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 267 LQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNA-LGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp SCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECS-SSCCEEEEETTSEEEEEE
T ss_pred CCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECC-CCCeEEEecCCceEEEEE
Confidence 9988755 57789999998765433 443 6788899999999 788999999999999996
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.5e-34 Score=282.15 Aligned_cols=250 Identities=22% Similarity=0.359 Sum_probs=217.0
Q ss_pred CeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC-cceEEEEccCCCCCcEEEEeeCCCeE
Q 009597 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLNPDDDKQNILLAGMSDKKI 352 (531)
Q Consensus 274 ~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~-~~~~~~~~~~~~~~~~l~sg~~dg~I 352 (531)
.....++.+|...|++++|+|++++|++|+.||.|+||++.+++.+..+..+. ....+.+.++ +.+|++|+.|+.|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~d~~i 89 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD---SNLLVSASDDKTL 89 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT---SSEEEEEETTSEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCC---CCEEEEECCCCEE
Confidence 46678899999999999999999999999999999999999999988885443 3345555553 4689999999999
Q ss_pred EEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE
Q 009597 353 VQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 432 (531)
Q Consensus 353 ~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s 432 (531)
++||+++++.+..+..|...|.++.|+|++++|++++.|+.|++||++++..+..+. .|...|.+++|+|++.+|++++
T Consensus 90 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec-CCCCcEEEEEEcCCCCEEEEEe
Confidence 999999999999999999999999999999999999999999999999998877765 4888999999999999999999
Q ss_pred cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcE--EEEEE
Q 009597 433 LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC--IGCEW 510 (531)
Q Consensus 433 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V--~~v~~ 510 (531)
.|+.|++||++++..+.... ..+ ...+..++|+|++++|++++.||.|++||+++++++..+.+|...+ ....+
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLI--DDD--NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 244 (312)
T ss_dssp TTSCEEEEETTTCCEEEEEC--CSS--CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEE
T ss_pred CCCcEEEEECCCCceeeEEe--ccC--CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEE
Confidence 99999999999875543221 222 3457889999999999999999999999999999999999887643 33455
Q ss_pred ecCCCCEEEEEeCCCCEEeeC
Q 009597 511 HPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 511 ~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++.++.+|++|+.||.|++||
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd 265 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWN 265 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEE
T ss_pred EeCCCcEEEEECCCCEEEEEE
Confidence 655788999999999999997
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.1e-33 Score=285.45 Aligned_cols=250 Identities=18% Similarity=0.294 Sum_probs=217.9
Q ss_pred ccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCC
Q 009597 272 FHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDK 350 (531)
Q Consensus 272 ~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg 350 (531)
+..+..++|.||.+.|++++|+|++++|+||+.||+|+|||..+++....+..+ ..+..+.++++ +.+|++|+.|+
T Consensus 52 ~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~---g~~lasg~~d~ 128 (354)
T 2pbi_B 52 FVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPS---GCAIACGGLDN 128 (354)
T ss_dssp CCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTT---SSEEEEESTTS
T ss_pred cccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCC---CCEEEEeeCCC
Confidence 445788999999999999999999999999999999999999999888777543 33556666664 46899999999
Q ss_pred eEEEEECCCC------ceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeC-
Q 009597 351 KIVQWDMNTK------EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP- 423 (531)
Q Consensus 351 ~I~iwd~~t~------~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp- 423 (531)
.|++|++... .....+..|...|.++.|+|++..|++++.|++|++||++++..+..+.. |...|.+++|+|
T Consensus 129 ~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 129 KCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG-HGADVLCLDLAPS 207 (354)
T ss_dssp EEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECCC
T ss_pred CEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC-CCCCeEEEEEEeC
Confidence 9999998643 34667788999999999999999999999999999999999988877754 889999999988
Q ss_pred -CCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecc-
Q 009597 424 -NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH- 501 (531)
Q Consensus 424 -~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h- 501 (531)
++++|++++.|+.|++||++++..+ ..+.+|. ..|.+++|+|++.+|++|+.|+.|++||++.++.+..+..+
T Consensus 208 ~~g~~l~sgs~Dg~v~~wd~~~~~~~---~~~~~h~--~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~ 282 (354)
T 2pbi_B 208 ETGNTFVSGGCDKKAMVWDMRSGQCV---QAFETHE--SDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES 282 (354)
T ss_dssp SSCCEEEEEETTSCEEEEETTTCCEE---EEECCCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEE---EEecCCC--CCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC
Confidence 5789999999999999999987554 4566664 56999999999999999999999999999999888777643
Q ss_pred -CCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 502 -EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 502 -~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
...+.+++|+| ++.+|++|+.||.|++||
T Consensus 283 ~~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd 312 (354)
T 2pbi_B 283 IIFGASSVDFSL-SGRLLFAGYNDYTINVWD 312 (354)
T ss_dssp CCSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred cccceeEEEEeC-CCCEEEEEECCCcEEEEE
Confidence 34789999999 888999999999999997
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-34 Score=287.75 Aligned_cols=251 Identities=22% Similarity=0.308 Sum_probs=209.1
Q ss_pred CeeeEEecCccC-ceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEE--EccCCCc--ceEEEEccCCCCCcEEEEeeC
Q 009597 274 GKCMRTYMGHSK-AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIR--TFSTGKI--PYVVKLNPDDDKQNILLAGMS 348 (531)
Q Consensus 274 ~~~~~~l~gH~~-~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~--~~~~~~~--~~~~~~~~~~~~~~~l~sg~~ 348 (531)
.+++.++.+|.. .|.+++|+|+|++|++|+.|++|+|||+.++..+. .+..++. +..+.|+++ +.+|++|+.
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~---g~~l~s~s~ 81 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC---GNYLASASF 81 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT---SSEEEEEET
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC---CCEEEEEEC
Confidence 467889999998 99999999999999999999999999998886443 2333444 445555553 468999999
Q ss_pred CCeEEEEECCCC--ceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeE--EEEeeCCCCCCccEEEEeCC
Q 009597 349 DKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVV--IKYISEPHMHSMPSISLHPN 424 (531)
Q Consensus 349 dg~I~iwd~~t~--~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~--~~~~~~~~~~~v~~v~~sp~ 424 (531)
|+.|++||+.++ +++..+.+|...|.+++|+|++++|++++.|++|++||++.... .......|...|.+++|+|+
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 999999999876 45788999999999999999999999999999999999987632 22333468899999999999
Q ss_pred CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCC-------------
Q 009597 425 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------------- 491 (531)
Q Consensus 425 ~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~------------- 491 (531)
+.+|++++.|+.|++||+..... .....+.+|. ..|.+++|+|+|++|++|+.||.|+|||...
T Consensus 162 ~~~l~s~s~d~~i~~w~~~~~~~-~~~~~~~~h~--~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~ 238 (345)
T 3fm0_A 162 QELLASASYDDTVKLYREEEDDW-VCCATLEGHE--STVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSD 238 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEE-EEEEEECCCS--SCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---
T ss_pred CCEEEEEeCCCcEEEEEecCCCE-EEEEEecCCC--CceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccC
Confidence 99999999999999999876532 2234567774 5699999999999999999999999999632
Q ss_pred --CeEEEEeec-cCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 492 --CKVFRTLKC-HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 492 --~~~~~~~~~-h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++..+.+ |...|.+++|+| .+..|++++.|+.|++||
T Consensus 239 ~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~vw~ 280 (345)
T 3fm0_A 239 PSWKCICTLSGFHSRTIYDIAWCQ-LTGALATACGDDAIRVFQ 280 (345)
T ss_dssp CEEEEEEEECSSCSSCEEEEEECT-TTCCEEEEETTSCEEEEE
T ss_pred CccceeEEecCCCCCcEEEEEEec-CCCEEEEEeCCCeEEEEE
Confidence 244555654 888999999999 777899999999999995
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-34 Score=285.90 Aligned_cols=269 Identities=18% Similarity=0.257 Sum_probs=212.5
Q ss_pred cCCCCCCCceeeeeecccC--eeeEEe-cC-ccCceEEEEEccCCCEEEEEecCCeEEEEeCCC-------CcEEEEccC
Q 009597 256 GNAGGEKGEHVEDKSTFHG--KCMRTY-MG-HSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-------GQVIRTFST 324 (531)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~--~~~~~l-~g-H~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t-------~~~i~~~~~ 324 (531)
.+++++.++.+++|+...+ +++..+ .+ |...|.+|+|+|++++|++|+.|++|+|||+.. .+++..+..
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 105 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG 105 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC
Confidence 6778889999999998764 566666 45 999999999999999999999999999999853 345555543
Q ss_pred C-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC----CceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEc
Q 009597 325 G-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT----KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399 (531)
Q Consensus 325 ~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t----~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~ 399 (531)
+ ..+..+.|+++ +.+|++|+.|++|++||++. .+++..+.+|...|.+++|+|++.+|++++.|++|++||.
T Consensus 106 h~~~V~~v~~sp~---g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 106 HENEVKGVAWSND---GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp ---CEEEEEECTT---SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred CCCcEEEEEECCC---CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 3 33455666653 46899999999999999943 2567788999999999999999999999999999999998
Q ss_pred CCC--eEEEEeeCCCCCCccEEEEeCC--CCEEEEEEcCCeEEEEEcCCcce-----eceeeeecC-CccccceEEEEEc
Q 009597 400 GIP--VVIKYISEPHMHSMPSISLHPN--TNWLAAQSLDNQILIYSTRERFQ-----LNKKKRFAG-HIVAGYACQVNFS 469 (531)
Q Consensus 400 ~~~--~~~~~~~~~~~~~v~~v~~sp~--~~~l~s~s~Dg~I~iwd~~~~~~-----~~~~~~~~~-~~~~~~v~~l~~s 469 (531)
..+ ..+..+ ..|...|.+++|+|+ +.+|++++.|++|++||+..... ......+.+ | ...|.+++|+
T Consensus 183 ~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~v~~s 259 (330)
T 2hes_X 183 YDDDWECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVH--KRQVYNVAWG 259 (330)
T ss_dssp ETTEEEEEEEE-CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCC--SSCEEEEEEC
T ss_pred CCCCeeEEEEc-cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccccc--ccceEEEEEc
Confidence 776 344444 459999999999998 77899999999999999875421 011222333 4 4569999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCe--EEEE-eeccCC-cEEEEEEecC-CCCEEEEEeCCCCEEeeC
Q 009597 470 PDGRFVMSGDGEGKCWFWDWKSCK--VFRT-LKCHEG-VCIGCEWHPL-EQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 470 pdg~~l~sgs~dg~I~iwd~~~~~--~~~~-~~~h~~-~V~~v~~~p~-~~~~l~t~s~Dg~I~iWD 531 (531)
+++ +|++++.||.|+|||..+++ .+.. +.+|.. .|.+++|+|. ++.+|++|+.||.|+|||
T Consensus 260 ~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~ 325 (330)
T 2hes_X 260 FNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWS 325 (330)
T ss_dssp TTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEE
T ss_pred CCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEE
Confidence 765 88999999999999998874 3333 357887 8999999995 567899999999999997
No 25
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=285.44 Aligned_cols=275 Identities=18% Similarity=0.240 Sum_probs=242.5
Q ss_pred HHHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC
Q 009597 246 EEYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG 325 (531)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~ 325 (531)
.+++..++++.++.+..++.+.+|+..+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+++++..+...
T Consensus 36 ~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 115 (369)
T 3zwl_B 36 TQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSP 115 (369)
T ss_dssp EEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECS
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC
Confidence 34556677788888899999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CcceEEEEccCCCCCcEEEEeeCC-----CeEEEEECCCCc-----------eeEEEcccCC--CeeEEEEecCCCEEEE
Q 009597 326 KIPYVVKLNPDDDKQNILLAGMSD-----KKIVQWDMNTKE-----------ITQEYDQHLG--AVNTITFVDSNRRFVT 387 (531)
Q Consensus 326 ~~~~~~~~~~~~~~~~~l~sg~~d-----g~I~iwd~~t~~-----------~~~~~~~h~~--~I~~l~~sp~~~~l~s 387 (531)
.....+.+.+. +.++++++.+ +.|++||+.... .+..+..|.. .+.+++|+|++++|++
T Consensus 116 ~~v~~~~~~~~---~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (369)
T 3zwl_B 116 VPVKRVEFSPC---GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIA 192 (369)
T ss_dssp SCEEEEEECTT---SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEE
T ss_pred CCeEEEEEccC---CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEE
Confidence 77777777764 3678888888 999999997653 3455566666 9999999999999999
Q ss_pred EeCCCCEEEEEcCC-CeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEE
Q 009597 388 SSDDKSLRVWEFGI-PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 466 (531)
Q Consensus 388 ~s~Dg~I~iwd~~~-~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l 466 (531)
++.||.|++||+++ ...+..+. .|...|.+++|+|++.+|++++.|+.|++||++++..+.... + ...+..+
T Consensus 193 ~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~--~~~~~~~ 265 (369)
T 3zwl_B 193 GHKDGKISKYDVSNNYEYVDSID-LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE----T--DCPLNTA 265 (369)
T ss_dssp EETTSEEEEEETTTTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----C--SSCEEEE
T ss_pred EcCCCEEEEEECCCCcEeEEEEe-cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec----C--CCCceeE
Confidence 99999999999998 56665554 488999999999999999999999999999999876553332 2 3558889
Q ss_pred EEcCCCCEEEEEeCCC--------------cEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 467 NFSPDGRFVMSGDGEG--------------KCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 467 ~~spdg~~l~sgs~dg--------------~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+|+|++.++++++.++ .+++||+.+++.+..+.+|...|.+++|+| ++.+|++++.||.|++||
T Consensus 266 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 266 VITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISP-QGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp EECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred EecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECC-CCCEEEEEcCCCeEEEEE
Confidence 9999999999999988 899999999999999999999999999999 888999999999999996
No 26
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-33 Score=307.61 Aligned_cols=275 Identities=13% Similarity=0.140 Sum_probs=228.6
Q ss_pred HHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc--EEEEccCC-
Q 009597 249 AKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ--VIRTFSTG- 325 (531)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~--~i~~~~~~- 325 (531)
..+++++.++.+. +..+.+|+..+++....|.+|...|++++|+|+|++|++|+.|++|+|||+.+++ ....+..+
T Consensus 25 ~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~ 103 (611)
T 1nr0_A 25 GNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFS 103 (611)
T ss_dssp EECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSS
T ss_pred eeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccC
Confidence 3456666666655 4589999998899999999999999999999999999999999999999986543 22222111
Q ss_pred ------------------------------------------Cc--ceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc
Q 009597 326 ------------------------------------------KI--PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE 361 (531)
Q Consensus 326 ------------------------------------------~~--~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~ 361 (531)
+. +..+.|++ +....|++|+.|++|++||..+++
T Consensus 104 ~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p--~~~~~l~s~s~D~~v~lwd~~~~~ 181 (611)
T 1nr0_A 104 GPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKP--SRPFRIISGSDDNTVAIFEGPPFK 181 (611)
T ss_dssp SCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECS--SSSCEEEEEETTSCEEEEETTTBE
T ss_pred CceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECC--CCCeEEEEEeCCCeEEEEECCCCe
Confidence 11 12233333 233479999999999999999999
Q ss_pred eeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeC------CCCCCccEEEEeCCCCEEEEEEcCC
Q 009597 362 ITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISE------PHMHSMPSISLHPNTNWLAAQSLDN 435 (531)
Q Consensus 362 ~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~------~~~~~v~~v~~sp~~~~l~s~s~Dg 435 (531)
++..+.+|...|.+++|+|++++|++++.|++|++||+.++..+..+.. .|...|.+++|+|++++|++++.|+
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~ 261 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK 261 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC
Confidence 9999999999999999999999999999999999999999988877743 6899999999999999999999999
Q ss_pred eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCC
Q 009597 436 QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 515 (531)
Q Consensus 436 ~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~ 515 (531)
+|++||+.++..+..+... .........+.| ++..|++++.||.|++||...+++...+.+|...|.+++|+| ++
T Consensus 262 ~v~lWd~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg 336 (611)
T 1nr0_A 262 TIKIWNVATLKVEKTIPVG--TRIEDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DG 336 (611)
T ss_dssp EEEEEETTTTEEEEEEECC--SSGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TS
T ss_pred eEEEEeCCCCceeeeecCC--CCccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CC
Confidence 9999999987665443321 112233455666 688999999999999999999999999999999999999999 88
Q ss_pred CEEEEEeCCCCEEeeC
Q 009597 516 SKVATCGWDGLIKYWD 531 (531)
Q Consensus 516 ~~l~t~s~Dg~I~iWD 531 (531)
.+|++++.||.|++||
T Consensus 337 ~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 337 KTLFSADAEGHINSWD 352 (611)
T ss_dssp SEEEEEETTSCEEEEE
T ss_pred CEEEEEeCCCcEEEEE
Confidence 8999999999999997
No 27
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.6e-34 Score=294.94 Aligned_cols=258 Identities=19% Similarity=0.326 Sum_probs=220.0
Q ss_pred eeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC-cceEEEEccCCCCCcEEE
Q 009597 266 VEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLNPDDDKQNILL 344 (531)
Q Consensus 266 i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~-~~~~~~~~~~~~~~~~l~ 344 (531)
+..|......+.++|.||.+.|++++|+|++++|+||+.||+|+|||+.+++.+..+..+. .+..+.|.++ +.+|+
T Consensus 48 ~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~---g~~la 124 (380)
T 3iz6_a 48 AVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPN---GQSVA 124 (380)
T ss_dssp CCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTT---SSEEE
T ss_pred ccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCC---CCEEE
Confidence 4456667788999999999999999999999999999999999999999999988886543 3455666654 46899
Q ss_pred EeeCCCeEEEEECCCCc-------eeEEEcccCCCeeEEEEecC-CCEEEEEeCCCCEEEEEcCCCeEEEEee----CCC
Q 009597 345 AGMSDKKIVQWDMNTKE-------ITQEYDQHLGAVNTITFVDS-NRRFVTSSDDKSLRVWEFGIPVVIKYIS----EPH 412 (531)
Q Consensus 345 sg~~dg~I~iwd~~t~~-------~~~~~~~h~~~I~~l~~sp~-~~~l~s~s~Dg~I~iwd~~~~~~~~~~~----~~~ 412 (531)
+|+.|+.|++||+.+.. ....+.+|.+.|.++.|+|+ +.+|++|+.|++|++||+.++..+..+. ..|
T Consensus 125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h 204 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH 204 (380)
T ss_dssp ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence 99999999999996532 34567899999999999996 4579999999999999999998877653 357
Q ss_pred CCCccEEEEeC-CCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 009597 413 MHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 491 (531)
Q Consensus 413 ~~~v~~v~~sp-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~ 491 (531)
...|.+++|++ ++++|++|+.|++|++||++... .....+.+|. ..|.+++|+|++.+|++|+.||.|++||+++
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h~--~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITS--RAVRTYHGHE--GDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC--CCCEEECCCS--SCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC--cceEEECCcC--CCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 88899999987 88999999999999999998432 2234566774 5688999999999999999999999999999
Q ss_pred CeEEEEeeccCC-------cEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 492 CKVFRTLKCHEG-------VCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 492 ~~~~~~~~~h~~-------~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++.+..+..+.. .|.+++|+| ++.+|++|+.||.|++||
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~dg~i~vwd 326 (380)
T 3iz6_a 281 GHQLQVYNREPDRNDNELPIVTSVAFSI-SGRLLFAGYSNGDCYVWD 326 (380)
T ss_dssp TEEEEEECCCCSSSCCSSCSCSEEEECS-SSSEEEEECTTSCEEEEE
T ss_pred CcEEEEecccccccccccCceEEEEECC-CCCEEEEEECCCCEEEEE
Confidence 999988865432 488999999 888999999999999997
No 28
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.2e-34 Score=291.96 Aligned_cols=256 Identities=16% Similarity=0.195 Sum_probs=196.9
Q ss_pred ceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEec------CCeEEEEeCCCCcEEEE-----ccCCCcceEEE
Q 009597 264 EHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASY------DKNIKYWDTETGQVIRT-----FSTGKIPYVVK 332 (531)
Q Consensus 264 ~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~------Dg~I~vWd~~t~~~i~~-----~~~~~~~~~~~ 332 (531)
.....|.... ....+|...|++|+|+|||++|++|+. |+.|++|+..++..... ..+...+..+.
T Consensus 26 ~~~~~w~~p~----~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~ 101 (357)
T 4g56_B 26 SKGSAWGRPV----TAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVA 101 (357)
T ss_dssp ------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEE
T ss_pred ccccccCCCC----CCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEE
Confidence 3345555432 334579999999999999999999997 78899999877654322 22334455666
Q ss_pred EccCCCCCcEEEEeeCCCeEEEEECCCCcee----EEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEe
Q 009597 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEIT----QEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYI 408 (531)
Q Consensus 333 ~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~----~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~ 408 (531)
|.++ ..+++++.||+|++||+.+++.. ....+|...|.+++|+|++++|++++.|++|++||++++..+..+
T Consensus 102 ~s~d----~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~ 177 (357)
T 4g56_B 102 WVSE----KGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY 177 (357)
T ss_dssp EETT----TEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EcCC----CCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 6654 24778889999999999887643 344579999999999999999999999999999999999888777
Q ss_pred eCCCCCCccEEEEeCCCC-EEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCC-CCEEEEEeCCCcEEE
Q 009597 409 SEPHMHSMPSISLHPNTN-WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD-GRFVMSGDGEGKCWF 486 (531)
Q Consensus 409 ~~~~~~~v~~v~~sp~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd-g~~l~sgs~dg~I~i 486 (531)
. .|...|.+++|+|++. +|++++.|+.|++||++++..... +..+.....+.+++|+|+ +.+|++|+.|+.|++
T Consensus 178 ~-~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~---~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~ 253 (357)
T 4g56_B 178 N-AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR---IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSL 253 (357)
T ss_dssp C-CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB---CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEE
T ss_pred c-CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee---eeeccccccccchhhhhcccceEEEeecccceeE
Confidence 5 4899999999999874 789999999999999988755432 222333466889999997 568999999999999
Q ss_pred EECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 487 WDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 487 wd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
||+++++++..+.+|...|.+++|+|++..+|++|+.||+|+|||
T Consensus 254 wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd 298 (357)
T 4g56_B 254 VNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLD 298 (357)
T ss_dssp EESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred EECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEE
Confidence 999999999999999999999999996667899999999999998
No 29
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.5e-34 Score=289.07 Aligned_cols=249 Identities=20% Similarity=0.327 Sum_probs=198.8
Q ss_pred EecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc--EEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEE
Q 009597 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ--VIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQW 355 (531)
Q Consensus 279 ~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~--~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iw 355 (531)
.+.+|.+.|++++|+|+|++|++|+.|++|+|||+.++. ++..+..+ ..+..+.|.+. ..+.+|++|+.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~-~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP-MYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCG-GGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCC-CCCCEEEEEECCCEEEEE
Confidence 457999999999999999999999999999999998875 35555433 23444555432 124689999999999999
Q ss_pred ECCCC--ceeEEEcccCCCeeEEEEecC--CCEEEEEeCCCCEEEEEcCCCeE--EEEeeCCCCCCccEEEEeCC-----
Q 009597 356 DMNTK--EITQEYDQHLGAVNTITFVDS--NRRFVTSSDDKSLRVWEFGIPVV--IKYISEPHMHSMPSISLHPN----- 424 (531)
Q Consensus 356 d~~t~--~~~~~~~~h~~~I~~l~~sp~--~~~l~s~s~Dg~I~iwd~~~~~~--~~~~~~~~~~~v~~v~~sp~----- 424 (531)
|++++ ..+..+.+|...|.+++|+|+ +.+|++++.|++|++||++.... .......|...+.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 99887 466778899999999999997 78999999999999999987632 22334568889999999997
Q ss_pred ------------CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCC----CEEEEEeCCCcEEEEE
Q 009597 425 ------------TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG----RFVMSGDGEGKCWFWD 488 (531)
Q Consensus 425 ------------~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg----~~l~sgs~dg~I~iwd 488 (531)
+.+|++++.|++|++||++..........+.+|. ..|.+++|+|++ .+|++|+.||+|+|||
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~--~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS--DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS--SCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCC--CceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 4789999999999999997543333445677774 569999999986 8999999999999999
Q ss_pred CCCC---e-EEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 489 WKSC---K-VFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 489 ~~~~---~-~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+.+. . ....+..|...|.+++|+| ++.+|++++.||.|+|||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp-~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSI-TANILAVSGGDNKVTLWK 290 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECT-TTCCEEEEESSSCEEEEE
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEE
Confidence 8762 1 2234567889999999999 788999999999999996
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-33 Score=280.47 Aligned_cols=247 Identities=19% Similarity=0.307 Sum_probs=199.8
Q ss_pred CeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCC--cEEEEccCC-C--cceEEEEccCCCCCcEEEEeeC
Q 009597 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG--QVIRTFSTG-K--IPYVVKLNPDDDKQNILLAGMS 348 (531)
Q Consensus 274 ~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~--~~i~~~~~~-~--~~~~~~~~~~~~~~~~l~sg~~ 348 (531)
.++++++.+|..+|.+++|+|+ +|++|+.|++|+|||+.++ ..+..+... + .+..+.|+++ +.+|++|+.
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~---~~~las~s~ 78 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPH---TSLLAAGSF 78 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTT---SSEEEEEET
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCC---CCEEEEEeC
Confidence 5678899999999999999987 8999999999999999875 455555322 3 3455666653 468999999
Q ss_pred CCeEEEEECCC-------CceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCC----eEEEEeeCCCCCCcc
Q 009597 349 DKKIVQWDMNT-------KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP----VVIKYISEPHMHSMP 417 (531)
Q Consensus 349 dg~I~iwd~~t-------~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~~~~~v~ 417 (531)
|++|++||+.. .+.+..+.+|...|.+++|+|++++|++++.|++|+|||++.. ..+..+ ..|...|.
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~-~~h~~~v~ 157 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL-QEHSQDVK 157 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE-CCCSSCEE
T ss_pred CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe-ccCCCceE
Confidence 99999999853 3567788999999999999999999999999999999999532 344444 45899999
Q ss_pred EEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCC--CCEEEEEeCCCcEEEEECCCC---
Q 009597 418 SISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD--GRFVMSGDGEGKCWFWDWKSC--- 492 (531)
Q Consensus 418 ~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd--g~~l~sgs~dg~I~iwd~~~~--- 492 (531)
+++|+|++.+|++++.|++|++||..... ......+.+|. ..|.+++|+|+ +.+|++|+.|+.|++||+..+
T Consensus 158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~-~~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 158 HVIWHPSEALLASSSYDDTVRIWKDYDDD-WECVAVLNGHE--GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED 234 (330)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCS--SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCC-eeEEEEccCCC--CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc
Confidence 99999999999999999999999987642 12345567774 56999999998 779999999999999998754
Q ss_pred -----eEEEEeec-cCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 493 -----KVFRTLKC-HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 493 -----~~~~~~~~-h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+...+.. |...|.+++|++ ++ +|++++.||.|+|||
T Consensus 235 ~~~~~~~~~~~~~~h~~~v~~v~~s~-~~-~l~s~~~dg~v~iw~ 277 (330)
T 2hes_X 235 DQQEWVCEAILPDVHKRQVYNVAWGF-NG-LIASVGADGVLAVYE 277 (330)
T ss_dssp SCEEEEEEEECCSCCSSCEEEEEECT-TS-CEEEEETTSCEEEEE
T ss_pred ccceeEEeeecccccccceEEEEEcC-CC-EEEEEeCCCEEEEEE
Confidence 45555654 899999999997 44 799999999999996
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.3e-33 Score=301.30 Aligned_cols=267 Identities=23% Similarity=0.448 Sum_probs=230.1
Q ss_pred HHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-Cc
Q 009597 249 AKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KI 327 (531)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~ 327 (531)
+..+++..++++..++.+++|+. .++.+..+.+|...|.+++|+|++++|++++.|+.|++|+. +++.+..+..+ ..
T Consensus 310 ~~~~~~~~l~t~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~ 387 (577)
T 2ymu_A 310 AFSPDGQTIASASDDKTVKLWNR-NGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 387 (577)
T ss_dssp EECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSC
T ss_pred EECCCCCEEEEEeCCCeEEEEeC-CCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCC
Confidence 44566777778888999999996 46677889999999999999999999999999999999995 56777777543 33
Q ss_pred ceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEE
Q 009597 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKY 407 (531)
Q Consensus 328 ~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~ 407 (531)
+..+.+.++ +.+|++++.|+.|++||. +++.+..+..|...|.+++|+|++++|++++.|+.|++||... ..+..
T Consensus 388 v~~~~~s~d---g~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~ 462 (577)
T 2ymu_A 388 VRGVAFSPD---GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQT 462 (577)
T ss_dssp EEEEEECTT---SSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CEEEE
T ss_pred eEEEEECCC---CCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-CEEEE
Confidence 455666653 357999999999999995 5778889999999999999999999999999999999999754 44555
Q ss_pred eeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEE
Q 009597 408 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487 (531)
Q Consensus 408 ~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iw 487 (531)
+. .|...|.+++|+|++++|++++.|+.|++||.. +. ....+.+|. ..|.+++|+|+|++|++++.||.|+||
T Consensus 463 ~~-~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~---~~~~~~~h~--~~v~~l~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 463 LT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ---LLQTLTGHS--SSVRGVAFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp EE-CCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SC---EEEEEECCS--SCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred Ec-CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CC---EEEEEeCCC--CCEEEEEEcCCCCEEEEEECcCEEEEE
Confidence 54 488999999999999999999999999999964 33 335567774 559999999999999999999999999
Q ss_pred ECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 488 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 488 d~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|. +++++..+.+|.+.|.+++|+| ++++|+|+|.||+|++||
T Consensus 536 d~-~~~~~~~~~~h~~~v~~~~fs~-dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 536 NR-NGQLLQTLTGHSSSVWGVAFSP-DGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CT-TSCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred eC-CCCEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEeC
Confidence 95 7889999999999999999999 788999999999999998
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.2e-33 Score=287.23 Aligned_cols=241 Identities=20% Similarity=0.406 Sum_probs=206.4
Q ss_pred CccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCc-------------------ceEEEEccCCCCCcE
Q 009597 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI-------------------PYVVKLNPDDDKQNI 342 (531)
Q Consensus 282 gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~-------------------~~~~~~~~~~~~~~~ 342 (531)
+|...|.+++|+|||++|++|+ ++.++||++.+++.+..+..... +..+.|++ .+.+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~---dg~~ 137 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP---DGKF 137 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT---TSSE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC---CCCE
Confidence 6999999999999999999987 78999999999998887754321 33455555 3468
Q ss_pred EEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEe
Q 009597 343 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLH 422 (531)
Q Consensus 343 l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~s 422 (531)
|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++.....+. +...+.+++|+
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~~ 215 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS--IEDGVTTVAVS 215 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE--cCCCcEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999998876664 56789999999
Q ss_pred C-CCCEEEEEEcCCeEEEEEcCCcceeceeee----ecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCC------
Q 009597 423 P-NTNWLAAQSLDNQILIYSTRERFQLNKKKR----FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS------ 491 (531)
Q Consensus 423 p-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~----~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~------ 491 (531)
| ++.+|++++.|+.|++||++++..+..+.. ..+| ...|.+++|+|+|++|++|+.||.|++||+++
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h--~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 293 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH--KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 293 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCC--SSCEEEEEECTTSSEEEEEETTSEEEEEEC--------
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCC--CCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 9 899999999999999999988765543321 1345 45699999999999999999999999999975
Q ss_pred ------CeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 492 ------CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 492 ------~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+.+...+.+|...|.+++|+| ++.+|++|+.||.|++||
T Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 294 SKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWD 338 (393)
T ss_dssp -------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEE
T ss_pred ccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEE
Confidence 345667889999999999999 788999999999999997
No 33
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.3e-33 Score=289.62 Aligned_cols=270 Identities=12% Similarity=0.160 Sum_probs=233.0
Q ss_pred ccCCCCCCCceeeeeecccCe------eeEEecCccCceEEEEEccC----C---CEEEEEecCCeEEEEeCCCCcE---
Q 009597 255 KGNAGGEKGEHVEDKSTFHGK------CMRTYMGHSKAVRDISFCND----G---TKFLTASYDKNIKYWDTETGQV--- 318 (531)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~~~~------~~~~l~gH~~~V~~l~fspd----g---~~l~s~s~Dg~I~vWd~~t~~~--- 318 (531)
..+++++.++.|++|+...++ ++..+.+|...|.+++|+|+ + ++|++++.||.|++||+.+++.
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK 106 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc
Confidence 467778889999999999888 88999999999999999999 9 9999999999999999998886
Q ss_pred --EEEccCC------CcceEEEEccCC-CCCcE-EEEeeCCCeEEEEECCC------CceeE-----EE-------cccC
Q 009597 319 --IRTFSTG------KIPYVVKLNPDD-DKQNI-LLAGMSDKKIVQWDMNT------KEITQ-----EY-------DQHL 370 (531)
Q Consensus 319 --i~~~~~~------~~~~~~~~~~~~-~~~~~-l~sg~~dg~I~iwd~~t------~~~~~-----~~-------~~h~ 370 (531)
+..+..+ ..+..+.+.+.. +.+.+ |++++.||.|++||+++ ++.+. .+ ..|.
T Consensus 107 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (397)
T 1sq9_A 107 VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 186 (397)
T ss_dssp EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSC
T ss_pred ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCC
Confidence 7777655 455666666211 13357 99999999999999998 66666 77 4588
Q ss_pred CCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCC--C---CCCccEEEEeCCCCEEEEEEcC---CeEEEEEc
Q 009597 371 GAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEP--H---MHSMPSISLHPNTNWLAAQSLD---NQILIYST 442 (531)
Q Consensus 371 ~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~--~---~~~v~~v~~sp~~~~l~s~s~D---g~I~iwd~ 442 (531)
..|.+++|+|++ +|++++.|+.|++||++++..+..+... | ...|.+++|+|++.+|++++.| +.|++||+
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEET
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 999999999999 9999999999999999999887776531 6 8899999999999999999999 99999999
Q ss_pred CCcceeceeeeecC-------------CccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee------cc--
Q 009597 443 RERFQLNKKKRFAG-------------HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK------CH-- 501 (531)
Q Consensus 443 ~~~~~~~~~~~~~~-------------~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~------~h-- 501 (531)
+++..+. .+.+ | ...+.+++|+|++++|++++.||.|+|||+++++++..+. .|
T Consensus 266 ~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 340 (397)
T 1sq9_A 266 EFGERIG---SLSVPTHSSQASLGEFAH--SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEE 340 (397)
T ss_dssp TTCCEEE---EECBC--------CCBSB--SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGG
T ss_pred CCCcccc---eeccCccccccccccccc--CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchh
Confidence 9875543 3444 4 4569999999999999999999999999999999999999 88
Q ss_pred -------------CCcEEEEEEecCCC----------CEEEEEeCCCCEEeeC
Q 009597 502 -------------EGVCIGCEWHPLEQ----------SKVATCGWDGLIKYWD 531 (531)
Q Consensus 502 -------------~~~V~~v~~~p~~~----------~~l~t~s~Dg~I~iWD 531 (531)
...|.+++|+| ++ .+|++++.||.|++||
T Consensus 341 ~~~~g~~~~~~~~~~~v~~~~~~~-~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 341 DILAVDEHGDSLAEPGVFDVKFLK-KGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp GCCCBCTTSCBCSSCCEEEEEEEC-TTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred hhhccccccccccCCceeEEEecc-ccccccccccccceEEEecCCCcEEEEE
Confidence 89999999999 54 7999999999999997
No 34
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.9e-32 Score=274.10 Aligned_cols=245 Identities=21% Similarity=0.313 Sum_probs=206.6
Q ss_pred CeeeEEecCccCceEEEEEccCC-CEEEEEecCCeEEEEeCCC-----CcEEEEccCC-CcceEEEEccCCCCCcEEEEe
Q 009597 274 GKCMRTYMGHSKAVRDISFCNDG-TKFLTASYDKNIKYWDTET-----GQVIRTFSTG-KIPYVVKLNPDDDKQNILLAG 346 (531)
Q Consensus 274 ~~~~~~l~gH~~~V~~l~fspdg-~~l~s~s~Dg~I~vWd~~t-----~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg 346 (531)
..+..+|.||.+.|++|+|+|++ ++|+||+.|++|++|++.. +..+..+..+ ..+..+.+.++ +.+|++|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d---g~~l~s~ 83 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD---GAYALSA 83 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT---SSEEEEE
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC---CCEEEEE
Confidence 45677899999999999999964 8999999999999999864 2345556433 33445566553 4689999
Q ss_pred eCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCC--
Q 009597 347 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN-- 424 (531)
Q Consensus 347 ~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~-- 424 (531)
+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||++.. .+..+ ..|...|.+++++|.
T Consensus 84 s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~-~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATL-LGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEEE-CCCSSCEEEEEECCC--
T ss_pred eCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEE-eccCCcEEEEEEccCCC
Confidence 99999999999999999999999999999999999999999999999999999754 44444 358899999999985
Q ss_pred ----CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec
Q 009597 425 ----TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500 (531)
Q Consensus 425 ----~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 500 (531)
+..|++++.|+.|++||++..... ..+.+|. ..|.+++|+|+|++|++|+.||.|+|||+.+++++..+..
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~---~~~~~h~--~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 236 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIE---ADFIGHN--SNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA 236 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEE---EEECCCC--SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhh---eeecCCC--CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 458999999999999999876433 4566774 5699999999999999999999999999999999999885
Q ss_pred cCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 501 HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 501 h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+ ..|.+++|+| ++.+|++++.+ .|++|+
T Consensus 237 ~-~~v~~~~~sp-~~~~la~~~~~-~i~v~~ 264 (319)
T 3frx_A 237 Q-DEVFSLAFSP-NRYWLAAATAT-GIKVFS 264 (319)
T ss_dssp C-SCEEEEEECS-SSSEEEEEETT-EEEEEE
T ss_pred C-CcEEEEEEcC-CCCEEEEEcCC-CcEEEE
Confidence 4 5799999999 77888887754 588885
No 35
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-34 Score=297.57 Aligned_cols=282 Identities=14% Similarity=0.190 Sum_probs=228.3
Q ss_pred HHHHhh-hhccCCCCCCCceeeeeeccc---Ce---eeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCC---CC
Q 009597 247 EYAKKK-EEKGNAGGEKGEHVEDKSTFH---GK---CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTE---TG 316 (531)
Q Consensus 247 ~~~~~~-~~~~~~~~~~~~~i~~~~~~~---~~---~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~---t~ 316 (531)
+++..+ ++..+++++.++.|++|+... +. +...+ +|...|++|+|+|++++|++|+.||.|++||++ ++
T Consensus 68 ~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~ 146 (437)
T 3gre_A 68 SSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQE 146 (437)
T ss_dssp EEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEET
T ss_pred EEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCC
Confidence 445566 677888899999999999876 33 34444 599999999999999999999999999999994 56
Q ss_pred cEEEEccC-------------CCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcc--cCCCeeEEEEecC
Q 009597 317 QVIRTFST-------------GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQ--HLGAVNTITFVDS 381 (531)
Q Consensus 317 ~~i~~~~~-------------~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~--h~~~I~~l~~sp~ 381 (531)
+.+..+.. .....++.+.+. ..+.+|++|+.|+.|++||+++++.+..+.. |.+.|++++|+|+
T Consensus 147 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~ 225 (437)
T 3gre_A 147 SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVN-EEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEE 225 (437)
T ss_dssp TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEEC-SSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTT
T ss_pred ceeeccccceeEEEEccCcccccCceEEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCC
Confidence 55544321 112222222222 3457999999999999999999999999988 8999999999999
Q ss_pred CCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeC----CCCEEEEEEcCCeEEEEEcCCcceeceeee----
Q 009597 382 NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP----NTNWLAAQSLDNQILIYSTRERFQLNKKKR---- 453 (531)
Q Consensus 382 ~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp----~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~---- 453 (531)
+++|++++.||.|++||++.+..+..+...|...|.+++|+| ++.+|++++.||.|++||++++..+..+..
T Consensus 226 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 305 (437)
T 3gre_A 226 CCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQ 305 (437)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSC
T ss_pred CCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCC
Confidence 999999999999999999999988887656788999996654 678999999999999999998765543321
Q ss_pred -----------------ecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec----------------
Q 009597 454 -----------------FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC---------------- 500 (531)
Q Consensus 454 -----------------~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~---------------- 500 (531)
+.+......|.+++|+ ++.+|++|+.||.|++||+.+++.+..+.+
T Consensus 306 ~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (437)
T 3gre_A 306 PSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTAN 384 (437)
T ss_dssp CCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETT
T ss_pred CccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecc
Confidence 1221134558889999 789999999999999999999887776665
Q ss_pred ---------------------cCCcEEEEEEecC-CCCEEEEEeCCCCEEeeC
Q 009597 501 ---------------------HEGVCIGCEWHPL-EQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 501 ---------------------h~~~V~~v~~~p~-~~~~l~t~s~Dg~I~iWD 531 (531)
|...|.+++|++. +..+|++|+.||.|+||+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 385 LTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred eEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8889999999994 367999999999999995
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.2e-33 Score=283.55 Aligned_cols=273 Identities=15% Similarity=0.168 Sum_probs=227.9
Q ss_pred HHhhhhccCCCCCCCceeeeeecccCe--eeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEcc---
Q 009597 249 AKKKEEKGNAGGEKGEHVEDKSTFHGK--CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--- 323 (531)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~--- 323 (531)
.+.++++.++.+..++.+.+|+...++ ++..+.+|...|.+++|+|++++|++++.||.|++||+.+++....+.
T Consensus 15 ~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 94 (372)
T 1k8k_C 15 AWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILR 94 (372)
T ss_dssp EECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCC
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeec
Confidence 345667778888889999999998887 999999999999999999999999999999999999999987655543
Q ss_pred CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCce---eE-EEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEc
Q 009597 324 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI---TQ-EYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399 (531)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~---~~-~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~ 399 (531)
....+..+.+.++ +.+|++++.|+.|++||++.+.. .. ....|...|.+++|+|++++|++++.|+.|++||+
T Consensus 95 ~~~~v~~~~~~~~---~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 95 INRAARCVRWAPN---EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp CSSCEEEEEECTT---SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred CCCceeEEEECCC---CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 3334455666553 46899999999999999988763 33 33678999999999999999999999999999995
Q ss_pred C------------------CCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCcccc
Q 009597 400 G------------------IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461 (531)
Q Consensus 400 ~------------------~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 461 (531)
+ .+..+..+. .|...|.+++|+|++.+|++++.|+.|++||++++..+ ..+..| ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~--~~ 245 (372)
T 1k8k_C 172 YIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV---ATLASE--TL 245 (372)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE---EEEECS--SC
T ss_pred ccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee---EEEccC--CC
Confidence 4 556666654 58889999999999999999999999999999987654 344555 34
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEECCC--CeE--------------------------------E------EEe-ec
Q 009597 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKS--CKV--------------------------------F------RTL-KC 500 (531)
Q Consensus 462 ~v~~l~~spdg~~l~sgs~dg~I~iwd~~~--~~~--------------------------------~------~~~-~~ 500 (531)
.+.+++|+|++.+|++| .|+.|++|++.+ ++. . ..+ .+
T Consensus 246 ~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (372)
T 1k8k_C 246 PLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSL 324 (372)
T ss_dssp CEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSS
T ss_pred CeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccccc
Confidence 58899999999999888 899999999987 421 0 233 48
Q ss_pred cCCcEEEEEEecCCC---CEEEEEeCCCCEEeeC
Q 009597 501 HEGVCIGCEWHPLEQ---SKVATCGWDGLIKYWD 531 (531)
Q Consensus 501 h~~~V~~v~~~p~~~---~~l~t~s~Dg~I~iWD 531 (531)
|...|.+++|++.++ .+|+||+.||.|++||
T Consensus 325 h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 325 HKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp SSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred ccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 999999999887576 8999999999999997
No 37
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-33 Score=289.01 Aligned_cols=271 Identities=16% Similarity=0.213 Sum_probs=238.6
Q ss_pred HHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCc
Q 009597 248 YAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327 (531)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~ 327 (531)
+.+.+++..++.+..++.+.+|+ ..++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.....
T Consensus 114 ~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 192 (425)
T 1r5m_A 114 LAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKET 192 (425)
T ss_dssp EEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--
T ss_pred EEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecccc
Confidence 34556667778888899999999 78899999999999999999999999999999999999999999999888865543
Q ss_pred ----------------ceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCC
Q 009597 328 ----------------PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391 (531)
Q Consensus 328 ----------------~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~D 391 (531)
...+.+.+. ..+++++.+|.|++||+++++.+..+..|...|.+++|+|++++|++++.|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 268 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVDD----DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDD 268 (425)
T ss_dssp -------------CCCBSCCEEEET----TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred CccceeeccccCCcceeeEEEEcCC----CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCC
Confidence 444555543 469999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCC
Q 009597 392 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 471 (531)
Q Consensus 392 g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd 471 (531)
+.|++||++.+..+..+. .|...|.+++|+|++ +|++++.|+.|++||++++..+ ..+..| ...+.+++|+|+
T Consensus 269 ~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~---~~~~~~--~~~i~~~~~s~~ 341 (425)
T 1r5m_A 269 GTLRIWHGGNGNSQNCFY-GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLL---ALSIVD--GVPIFAGRISQD 341 (425)
T ss_dssp SCEEEECSSSBSCSEEEC-CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEE---EEEECT--TCCEEEEEECTT
T ss_pred CEEEEEECCCCccceEec-CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEe---EecccC--CccEEEEEEcCC
Confidence 999999999887766664 488899999999999 9999999999999999887554 334444 345889999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCe--------------------EEEEeeccCC--cEEEEEEecCCCCEEEEEeCCCCEEe
Q 009597 472 GRFVMSGDGEGKCWFWDWKSCK--------------------VFRTLKCHEG--VCIGCEWHPLEQSKVATCGWDGLIKY 529 (531)
Q Consensus 472 g~~l~sgs~dg~I~iwd~~~~~--------------------~~~~~~~h~~--~V~~v~~~p~~~~~l~t~s~Dg~I~i 529 (531)
+++|++++.||.|++||+.+++ ++..+..|.. .|.+++|+| ++.+|++++.||.|++
T Consensus 342 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i 420 (425)
T 1r5m_A 342 GQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC-AGNKISVAYSLQEGSV 420 (425)
T ss_dssp SSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT-TSSEEEEEESSSCCEE
T ss_pred CCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC-CCceEEEEecCceEEE
Confidence 9999999999999999999888 8999999976 999999999 7789999999999999
Q ss_pred eC
Q 009597 530 WD 531 (531)
Q Consensus 530 WD 531 (531)
||
T Consensus 421 w~ 422 (425)
T 1r5m_A 421 VA 422 (425)
T ss_dssp EE
T ss_pred Ee
Confidence 97
No 38
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.9e-32 Score=283.28 Aligned_cols=270 Identities=17% Similarity=0.271 Sum_probs=224.7
Q ss_pred HHhhhhccCCCCCCCceeeeeecccCeeeEEec--CccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC
Q 009597 249 AKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYM--GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326 (531)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~--gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~ 326 (531)
.++... .++.|. ++.|++|+..+++++..+. +|...|++|+|+|+|++|++|+.||+|+|||+++++++..+.. +
T Consensus 112 ~wS~~n-~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~-h 188 (420)
T 4gga_A 112 DWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS-H 188 (420)
T ss_dssp EECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-C
T ss_pred EECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC-C
Confidence 344333 444443 7899999999999887664 6788999999999999999999999999999999999998854 4
Q ss_pred cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC-ceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeE-
Q 009597 327 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK-EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVV- 404 (531)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~-~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~- 404 (531)
...+.++.++ +.+|++|+.|+.+++||.... ..+..+.+|...+..+.|+|+++++++++.|+.|++|+...+..
T Consensus 189 ~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~ 265 (420)
T 4gga_A 189 SARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 265 (420)
T ss_dssp SSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC
T ss_pred CCceEEEeeC---CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccccc
Confidence 4455556654 368999999999999999864 56678899999999999999999999999999999999987542
Q ss_pred --EEEeeCCCCCCccEEEEeCCC-CEEEEE--EcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEe
Q 009597 405 --IKYISEPHMHSMPSISLHPNT-NWLAAQ--SLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD 479 (531)
Q Consensus 405 --~~~~~~~~~~~v~~v~~sp~~-~~l~s~--s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs 479 (531)
.......|...|.+++|+|.+ .+++++ +.|++|++||+.++..+.. +..+ ..++++.|++++..|++++
T Consensus 266 ~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~---~~~~---~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 266 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA---VDAH---SQVCSILWSPHYKELISGH 339 (420)
T ss_dssp SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE---EECS---SCEEEEEEETTTTEEEEEE
T ss_pred ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee---eccc---cceeeeeecCCCCeEEEEE
Confidence 112234588899999999965 555554 4799999999998865533 3333 4578899999999998765
Q ss_pred --CCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 480 --GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 480 --~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.|+.|+|||+.+++++..+.+|.+.|.+++|+| ++.+|+|||.||+|+|||
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWR 392 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEEC
T ss_pred ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEE
Confidence 789999999999999999999999999999999 788999999999999997
No 39
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.6e-32 Score=273.93 Aligned_cols=270 Identities=13% Similarity=0.255 Sum_probs=229.3
Q ss_pred HHHhhhhccCCCCCCCceeeeeecccCe---eeEEec--CccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc--EEE
Q 009597 248 YAKKKEEKGNAGGEKGEHVEDKSTFHGK---CMRTYM--GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ--VIR 320 (531)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~l~--gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~--~i~ 320 (531)
+...++++.++.+. ++.+.+|+...++ .+..+. +|...|.+++|+|++++|++++.|+.|++||+.+++ ...
T Consensus 57 ~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 135 (337)
T 1gxr_A 57 VTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA 135 (337)
T ss_dssp EEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEE
T ss_pred EEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceee
Confidence 33456666777777 8999999987654 333333 899999999999999999999999999999999887 444
Q ss_pred EccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEc
Q 009597 321 TFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEF 399 (531)
Q Consensus 321 ~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~ 399 (531)
.+..+ .....+.+.++ +.++++++.||.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 136 ~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 136 ELTSSAPACYALAISPD---SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp EEECSSSCEEEEEECTT---SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ecccCCCceEEEEECCC---CCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 44333 23445556553 468999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEe
Q 009597 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD 479 (531)
Q Consensus 400 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs 479 (531)
+++..+..+. +...+.+++|+|++++|++++.++.|++||+...... .+..| ...+.+++|+|++++|++++
T Consensus 213 ~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~----~~~~~--~~~v~~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 213 REGRQLQQHD--FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY----QLHLH--ESCVLSLKFAYCGKWFVSTG 284 (337)
T ss_dssp TTTEEEEEEE--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE----EECCC--SSCEEEEEECTTSSEEEEEE
T ss_pred CCCceEeeec--CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE----EEcCC--ccceeEEEECCCCCEEEEec
Confidence 9998877764 6778999999999999999999999999999886432 34445 45689999999999999999
Q ss_pred CCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 480 GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 480 ~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.||.|++||+.+++.+... .|...|.+++|+| ++.+|++++.||.|++||
T Consensus 285 ~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 285 KDNLLNAWRTPYGASIFQS-KESSSVLSCDISV-DDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp TTSEEEEEETTTCCEEEEE-ECSSCEEEEEECT-TSCEEEEEETTSCEEEEE
T ss_pred CCCcEEEEECCCCeEEEEe-cCCCcEEEEEECC-CCCEEEEecCCCeEEEEE
Confidence 9999999999999888554 4888999999999 788999999999999996
No 40
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.1e-32 Score=295.07 Aligned_cols=268 Identities=22% Similarity=0.438 Sum_probs=229.1
Q ss_pred HHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcc
Q 009597 249 AKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 328 (531)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~ 328 (531)
...+++..++.+..++.+++|+. .++++..+.+|...|.+++|+|++++|++++.|+.|++||+...............
T Consensus 269 ~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v 347 (577)
T 2ymu_A 269 AFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSV 347 (577)
T ss_dssp EECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCE
T ss_pred EEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCE
Confidence 34556677777888899999985 67889999999999999999999999999999999999998665443333233444
Q ss_pred eEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEe
Q 009597 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYI 408 (531)
Q Consensus 329 ~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~ 408 (531)
..+.+.++ +.+|++|+.|+.|++||. +++.+..+..|...|.+++|+|++++|++++.|+.|++||.. +..+..+
T Consensus 348 ~~~~~s~~---g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~~~~~~ 422 (577)
T 2ymu_A 348 WGVAFSPD---GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTL 422 (577)
T ss_dssp EEEEECTT---SSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-CCEEEEE
T ss_pred EEEEECCC---CCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEe
Confidence 55666653 468999999999999995 578888999999999999999999999999999999999964 4455555
Q ss_pred eCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 009597 409 SEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488 (531)
Q Consensus 409 ~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd 488 (531)
. .|...|.+++|+|++++|++++.|+.|++||.... ....+.+|. ..+.+++|+|++++|++++.|+.|++||
T Consensus 423 ~-~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~----~~~~~~~~~--~~v~~~~~spd~~~las~~~d~~i~iw~ 495 (577)
T 2ymu_A 423 T-GHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQ----LLQTLTGHS--SSVRGVAFSPDGQTIASASDDKTVKLWN 495 (577)
T ss_dssp E-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC----EEEEEECCS--SCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred c-CCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCC----EEEEEcCCC--CCEEEEEEcCCCCEEEEEeCCCEEEEEc
Confidence 4 48899999999999999999999999999997542 234556664 5589999999999999999999999999
Q ss_pred CCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 489 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 489 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++++..+.+|...|.+++|+| ++.+|++++.||.|+|||
T Consensus 496 -~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 496 -RNGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWN 536 (577)
T ss_dssp -TTSCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEEC
T ss_pred -CCCCEEEEEeCCCCCEEEEEEcC-CCCEEEEEECcCEEEEEe
Confidence 57889999999999999999999 788999999999999998
No 41
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.7e-33 Score=284.81 Aligned_cols=283 Identities=14% Similarity=0.152 Sum_probs=235.6
Q ss_pred HHHhh-hhccCCCCCCCceeeeeecccCeeeEEec-------------CccCceEEEEEcc-CCCEEEEEecCCeEEEEe
Q 009597 248 YAKKK-EEKGNAGGEKGEHVEDKSTFHGKCMRTYM-------------GHSKAVRDISFCN-DGTKFLTASYDKNIKYWD 312 (531)
Q Consensus 248 ~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~l~-------------gH~~~V~~l~fsp-dg~~l~s~s~Dg~I~vWd 312 (531)
++..+ ++..+++++.++.+.+|+...++....+. +|...|.+++|+| ++.+|++++.||.|++||
T Consensus 49 ~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 128 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWD 128 (408)
T ss_dssp EEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEE
T ss_pred EEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEee
Confidence 44556 67788888999999999998876665553 6999999999999 788999999999999999
Q ss_pred CCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCC-EEEEEeCC
Q 009597 313 TETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNR-RFVTSSDD 391 (531)
Q Consensus 313 ~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~-~l~s~s~D 391 (531)
+.+++.+..+........+.+.+......++++|+.++.|++||+++++.+..+..|...|.+++|+|+++ .|++++.|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~d 208 (408)
T 4a11_B 129 TNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASAD 208 (408)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCC
Confidence 99999999998888888889988877778999999999999999999999999999999999999999998 58999999
Q ss_pred CCEEEEEcCCCe-EEEEee--------------CCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecC
Q 009597 392 KSLRVWEFGIPV-VIKYIS--------------EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 456 (531)
Q Consensus 392 g~I~iwd~~~~~-~~~~~~--------------~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~ 456 (531)
|.|++||++... .+..+. ..|...|.+++|+|++++|++++.||.|++||+.++...........
T Consensus 209 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 288 (408)
T 4a11_B 209 SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVC 288 (408)
T ss_dssp SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCC
T ss_pred CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceecccccc
Confidence 999999998764 222221 35778899999999999999999999999999998754432211111
Q ss_pred CccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 457 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 457 ~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
......+........+..+++++.++.|++||+.+++++..+.+|.+.|.+++|+| ++.+|++++.||.|++||
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~ 362 (408)
T 4a11_B 289 NNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQS-NFQELYSGSRDCNILAWV 362 (408)
T ss_dssp CCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEE
T ss_pred ccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcC-CCCEEEEECCCCeEEEEe
Confidence 11111111122233455666778899999999999999999999999999999999 788999999999999997
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-33 Score=288.61 Aligned_cols=277 Identities=14% Similarity=0.149 Sum_probs=213.9
Q ss_pred HHHHhhhhccCCCCCCCceeeeeecccC--eeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc---EEEE
Q 009597 247 EYAKKKEEKGNAGGEKGEHVEDKSTFHG--KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ---VIRT 321 (531)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~---~i~~ 321 (531)
+++..++++.++.++.++.+.+|+...+ +++..+.+|...|.+++|+|++++|++++.|++|+|||+.+++ ....
T Consensus 16 ~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~ 95 (377)
T 3dwl_C 16 EHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLV 95 (377)
T ss_dssp CCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEE
T ss_pred EEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeE
Confidence 3455667778888989999999999988 8899999999999999999999999999999999999999877 4444
Q ss_pred cc-CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc---eeEEEcc-cCCCeeEEEEecCCCEEEEEeCCCCEEE
Q 009597 322 FS-TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE---ITQEYDQ-HLGAVNTITFVDSNRRFVTSSDDKSLRV 396 (531)
Q Consensus 322 ~~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~---~~~~~~~-h~~~I~~l~~sp~~~~l~s~s~Dg~I~i 396 (531)
+. +......+.++++ +.+|++|+.|+.|++||+++++ ....+.. |...|.+++|+|++++|++++.|+.|++
T Consensus 96 ~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~i 172 (377)
T 3dwl_C 96 LLRLNRAATFVRWSPN---EDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYV 172 (377)
T ss_dssp CCCCSSCEEEEECCTT---SSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEE
T ss_pred ecccCCceEEEEECCC---CCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEE
Confidence 43 3334455555553 4679999999999999999887 4778887 9999999999999999999999999999
Q ss_pred EEcCC------------------CeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceec-eeeeecCC
Q 009597 397 WEFGI------------------PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN-KKKRFAGH 457 (531)
Q Consensus 397 wd~~~------------------~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~-~~~~~~~~ 457 (531)
||+.. +..+..+ .|...|.+++|+|++++|++++.|+.|++||+.++.... ....+.+|
T Consensus 173 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 250 (377)
T 3dwl_C 173 LSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS 250 (377)
T ss_dssp EEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS
T ss_pred EEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC
Confidence 99852 3344444 688999999999999999999999999999999876521 13456666
Q ss_pred ccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCe---------------------------------------EEEE-
Q 009597 458 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK---------------------------------------VFRT- 497 (531)
Q Consensus 458 ~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~---------------------------------------~~~~- 497 (531)
. ..+.+++|+|++++|++|+.++.+ +|+..... .+..
T Consensus 251 ~--~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (377)
T 3dwl_C 251 Q--LPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNM 327 (377)
T ss_dssp S--SCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC----------------
T ss_pred C--CceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccch
Confidence 4 558999999999999999877666 66554111 0110
Q ss_pred ------------eeccCCcEEEEEEecCCCC---EEEEEeCCCCEEeeC
Q 009597 498 ------------LKCHEGVCIGCEWHPLEQS---KVATCGWDGLIKYWD 531 (531)
Q Consensus 498 ------------~~~h~~~V~~v~~~p~~~~---~l~t~s~Dg~I~iWD 531 (531)
...|...|.++.+.+.++. .|+|||.||.|+|||
T Consensus 328 ~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWd 376 (377)
T 3dwl_C 328 DLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWT 376 (377)
T ss_dssp ---------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEEC
T ss_pred hhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEec
Confidence 0139999999998874444 699999999999998
No 43
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-32 Score=283.32 Aligned_cols=263 Identities=16% Similarity=0.253 Sum_probs=224.8
Q ss_pred CCCCCCCceeeeeecccCeeeEEecC-ccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEcc
Q 009597 257 NAGGEKGEHVEDKSTFHGKCMRTYMG-HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNP 335 (531)
Q Consensus 257 ~~~~~~~~~i~~~~~~~~~~~~~l~g-H~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~ 335 (531)
++.++.++.+.+|+..+++....+.. |...|.+++|+|++++|++|+.||.|++||+.+++.+..+.. +...+..+.+
T Consensus 106 l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~ 184 (401)
T 4aez_A 106 VVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG-HQARVGCLSW 184 (401)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEE
T ss_pred EEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC-CCCceEEEEE
Confidence 44556788999999999999888876 899999999999999999999999999999999999988863 3334444444
Q ss_pred CCCCCcEEEEeeCCCeEEEEECC-CCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCC
Q 009597 336 DDDKQNILLAGMSDKKIVQWDMN-TKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 414 (531)
Q Consensus 336 ~~~~~~~l~sg~~dg~I~iwd~~-t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~ 414 (531)
+ +.+|++|+.||.|++||++ ....+..+..|.+.|.+++|+|++++|++++.|+.|++||++++..+..+. .|..
T Consensus 185 ~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~~~~ 260 (401)
T 4aez_A 185 N---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT-NHNA 260 (401)
T ss_dssp E---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC-CCSS
T ss_pred C---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec-CCcc
Confidence 2 3689999999999999998 567788899999999999999999999999999999999999988877665 4889
Q ss_pred CccEEEEeCCCC-EEEEEE--cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEE--EeCCCcEEEEEC
Q 009597 415 SMPSISLHPNTN-WLAAQS--LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS--GDGEGKCWFWDW 489 (531)
Q Consensus 415 ~v~~v~~sp~~~-~l~s~s--~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s--gs~dg~I~iwd~ 489 (531)
.|.+++|+|++. ++++++ .|+.|++||+.++..+... .. ...+++++|+|++.+|++ |+.||.|++||+
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~---~~---~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV---DA---GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE---EC---SSCEEEEEECSSSSEEEEEECTTTCEEEEEEE
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE---eC---CCcEEEEEECCCCCeEEEEeecCCCcEEEEec
Confidence 999999999764 555554 6999999999987655333 22 345899999999999999 558999999999
Q ss_pred CCCeEEE--EeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 490 KSCKVFR--TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 490 ~~~~~~~--~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++... .+.+|...|.+++|+| ++.+|++++.||.|++||
T Consensus 335 ~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 335 SSSGLTKQVDIPAHDTRVLYSALSP-DGRILSTAASDENLKFWR 377 (401)
T ss_dssp ETTEEEEEEEEECCSSCCCEEEECT-TSSEEEEECTTSEEEEEE
T ss_pred CCccceeEEEecCCCCCEEEEEECC-CCCEEEEEeCCCcEEEEE
Confidence 9866554 4678999999999999 888999999999999996
No 44
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.4e-32 Score=304.32 Aligned_cols=264 Identities=20% Similarity=0.352 Sum_probs=220.8
Q ss_pred cCCCCCCCceeeeeeccc-----CeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC-cce
Q 009597 256 GNAGGEKGEHVEDKSTFH-----GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPY 329 (531)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~-----~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~-~~~ 329 (531)
.+++++.++.|++|+... +.+.+.+.+|...|.+++|+|++++|++|+.||+|+|||+.++.++..+..+. .+.
T Consensus 397 ~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~ 476 (694)
T 3dm0_A 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL 476 (694)
T ss_dssp EEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred EEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEE
Confidence 456778899999998654 45678899999999999999999999999999999999999999988886443 345
Q ss_pred EEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEE---cccCCCeeEEEEecCC--CEEEEEeCCCCEEEEEcCCCeE
Q 009597 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY---DQHLGAVNTITFVDSN--RRFVTSSDDKSLRVWEFGIPVV 404 (531)
Q Consensus 330 ~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~---~~h~~~I~~l~~sp~~--~~l~s~s~Dg~I~iwd~~~~~~ 404 (531)
++.++++ +.+|++|+.|++|++||+......... .+|...|.+++|+|++ ..|++++.|++|++||++....
T Consensus 477 ~~~~s~~---~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~ 553 (694)
T 3dm0_A 477 SVAFSLD---NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 553 (694)
T ss_dssp EEEECTT---SSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE
T ss_pred EEEEeCC---CCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE
Confidence 5666654 357999999999999998755433322 4688899999999986 6899999999999999999887
Q ss_pred EEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcE
Q 009597 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 484 (531)
Q Consensus 405 ~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I 484 (531)
...+. .|...|.+++|+|++++|++++.||.|++||++++..+.. +.. ...+.+++|+|++.+|++++ ++.|
T Consensus 554 ~~~~~-~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~---~~~---~~~v~~~~~sp~~~~l~~~~-~~~i 625 (694)
T 3dm0_A 554 RSTLA-GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS---LEA---NSVIHALCFSPNRYWLCAAT-EHGI 625 (694)
T ss_dssp EEEEC-CCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEEC---CBC---SSCEEEEEECSSSSEEEEEE-TTEE
T ss_pred EEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE---ecC---CCcEEEEEEcCCCcEEEEEc-CCCE
Confidence 77664 5899999999999999999999999999999998765532 222 24588899999999887776 4569
Q ss_pred EEEECCCCeEEEEeeccCC-------------------cEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 485 WFWDWKSCKVFRTLKCHEG-------------------VCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 485 ~iwd~~~~~~~~~~~~h~~-------------------~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+|||+++++++..+..+.. .|.+++|+| ++.+|++|+.||.|+|||
T Consensus 626 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sp-dg~~l~sgs~Dg~i~iW~ 690 (694)
T 3dm0_A 626 KIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSA-DGSTLFSGYTDGVIRVWG 690 (694)
T ss_dssp EEEETTTTEEEEEECCCCC----------------CCCCEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred EEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcC-CCCEEEEEcCCCeEEEEe
Confidence 9999999999887754321 378999999 888999999999999997
No 45
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.4e-32 Score=274.17 Aligned_cols=247 Identities=18% Similarity=0.320 Sum_probs=199.6
Q ss_pred cCeeeEEecCccCceEEEEE-----cc-CCCEEEEEecCCeEEEEeCCCC-------cEEEEccCC-CcceEEEEccCCC
Q 009597 273 HGKCMRTYMGHSKAVRDISF-----CN-DGTKFLTASYDKNIKYWDTETG-------QVIRTFSTG-KIPYVVKLNPDDD 338 (531)
Q Consensus 273 ~~~~~~~l~gH~~~V~~l~f-----sp-dg~~l~s~s~Dg~I~vWd~~t~-------~~i~~~~~~-~~~~~~~~~~~~~ 338 (531)
..++..+|.||...|++++| ++ ++++|+||+.|++|+|||+.+. .....+..+ ..+..+.++++
T Consensus 10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~-- 87 (343)
T 2xzm_R 10 QVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE-- 87 (343)
T ss_dssp EEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS--
T ss_pred EeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC--
Confidence 34677889999999999999 77 8999999999999999998753 344555433 23445555543
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEe-eCCCCCCcc
Q 009597 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYI-SEPHMHSMP 417 (531)
Q Consensus 339 ~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~-~~~~~~~v~ 417 (531)
+.++++|+.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+......... ...|...|.
T Consensus 88 -~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 88 -NCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVS 166 (343)
T ss_dssp -TTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred -CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceee
Confidence 468999999999999999999999999999999999999999999999999999999999854333222 125778899
Q ss_pred EEEEeCCC----------CEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEE
Q 009597 418 SISLHPNT----------NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487 (531)
Q Consensus 418 ~v~~sp~~----------~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iw 487 (531)
+++|+|++ .+|++++.|+.|++||... .....+.+|. ..|.+++|+|+|++|++|+.||.|++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~h~--~~v~~~~~s~~g~~l~sgs~dg~v~iw 240 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF----QIRYTFKAHE--SNVNHLSISPNGKYIATGGKDKKLLIW 240 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT----EEEEEEECCS--SCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC----ceeEEEcCcc--ccceEEEECCCCCEEEEEcCCCeEEEE
Confidence 99999986 7999999999999999543 2234456664 569999999999999999999999999
Q ss_pred ECC-CCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 488 DWK-SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 488 d~~-~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|+. .......+. +...|.+++|+| ++.+|+ ++.|+.|++||
T Consensus 241 d~~~~~~~~~~~~-~~~~v~~v~~sp-~~~~la-~~~d~~v~iw~ 282 (343)
T 2xzm_R 241 DILNLTYPQREFD-AGSTINQIAFNP-KLQWVA-VGTDQGVKIFN 282 (343)
T ss_dssp ESSCCSSCSEEEE-CSSCEEEEEECS-SSCEEE-EEESSCEEEEE
T ss_pred ECCCCcccceeec-CCCcEEEEEECC-CCCEEE-EECCCCEEEEE
Confidence 994 444444443 556799999999 666665 55688899996
No 46
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.1e-33 Score=282.65 Aligned_cols=272 Identities=16% Similarity=0.184 Sum_probs=222.8
Q ss_pred HHhhhh-ccCCCCCCCceeeeeecccCeeeEEec--CccCceEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEEccC
Q 009597 249 AKKKEE-KGNAGGEKGEHVEDKSTFHGKCMRTYM--GHSKAVRDISFCN-DGTKFLTASYDKNIKYWDTETGQVIRTFST 324 (531)
Q Consensus 249 ~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~l~--gH~~~V~~l~fsp-dg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~ 324 (531)
.+.+++ ..+++++.++.+.+|+...++....+. +|...|.+++|+| ++++|++++.|+.|++||+.+ ..+..+..
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~ 158 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAK 158 (383)
T ss_dssp EECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEEC
T ss_pred EECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEec
Confidence 345555 678888889999999999888877775 7999999999999 789999999999999999986 55555543
Q ss_pred C----CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCC-EEEEEeCCCCEEEEEc
Q 009597 325 G----KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNR-RFVTSSDDKSLRVWEF 399 (531)
Q Consensus 325 ~----~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~-~l~s~s~Dg~I~iwd~ 399 (531)
. ....++.++++ +.+|++|+.|+.|++||+ +++.+..+..|...|.+++|+|+++ +|++++.|+.|++||+
T Consensus 159 ~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 234 (383)
T 3ei3_B 159 TDSWDYWYCCVDVSVS---RQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDL 234 (383)
T ss_dssp CCCSSCCEEEEEEETT---TTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEG
T ss_pred cCCCCCCeEEEEECCC---CCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeC
Confidence 3 23456666653 368999999999999999 5778899999999999999999999 9999999999999999
Q ss_pred CC----CeEEEEeeCCCCCCccEEEEeC-CCCEEEEEEcCCeEEEEEcCCcceeceeeeec----CCcc--------ccc
Q 009597 400 GI----PVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERFQLNKKKRFA----GHIV--------AGY 462 (531)
Q Consensus 400 ~~----~~~~~~~~~~~~~~v~~v~~sp-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~----~~~~--------~~~ 462 (531)
++ ...+..+ .|...|.+++|+| ++.+|++++.|+.|++||+++...+..+.... .|.. .+.
T Consensus 235 ~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 312 (383)
T 3ei3_B 235 RNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYD 312 (383)
T ss_dssp GGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSS
T ss_pred CCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCC
Confidence 87 5566555 3889999999999 99999999999999999998876543332111 1100 123
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec--cCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC--HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 463 v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~--h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+..++|+|++++ +|+.||.|+|||+.+++++..+.+ |.+.+..++|+| ++.+|++++ ||.|+|||
T Consensus 313 ~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~-~g~~l~s~s-d~~i~iw~ 379 (383)
T 3ei3_B 313 LIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSP-TGDVLASGM-GFNILIWN 379 (383)
T ss_dssp EEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECT-TSSEEEEEE-TTEEEEEE
T ss_pred ceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEec-CccEEEEec-CCcEEEEe
Confidence 444677777777 778999999999999999999987 456777789999 788999997 99999997
No 47
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.3e-31 Score=268.32 Aligned_cols=273 Identities=20% Similarity=0.325 Sum_probs=226.4
Q ss_pred HHHHhhh-hccCCCCCCCceeeeeeccc-----CeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEE
Q 009597 247 EYAKKKE-EKGNAGGEKGEHVEDKSTFH-----GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIR 320 (531)
Q Consensus 247 ~~~~~~~-~~~~~~~~~~~~i~~~~~~~-----~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~ 320 (531)
++++.++ ++.+++++.|+.|++|+... +.+.+++.+|...|.+++|+|++++|++++.|+.|++|+........
T Consensus 43 ~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~ 122 (340)
T 4aow_A 43 QIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR 122 (340)
T ss_dssp EEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceee
Confidence 3445554 46788899999999998654 35678999999999999999999999999999999999999988877
Q ss_pred EccCCCcce-EEEEccCCCCCcEEEEeeCCCeEEEEECCCCce-eEEEcccCCCeeEEEEecCC--CEEEEEeCCCCEEE
Q 009597 321 TFSTGKIPY-VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI-TQEYDQHLGAVNTITFVDSN--RRFVTSSDDKSLRV 396 (531)
Q Consensus 321 ~~~~~~~~~-~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~-~~~~~~h~~~I~~l~~sp~~--~~l~s~s~Dg~I~i 396 (531)
......... ...+.+ .+.+|++|+.|+.+++||+..... ...+..|...|.+++|++++ .++++++.|+.|++
T Consensus 123 ~~~~~~~~~~~~~~~~---~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i 199 (340)
T 4aow_A 123 RFVGHTKDVLSVAFSS---DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 199 (340)
T ss_dssp EEECCSSCEEEEEECT---TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred eecCCCCceeEEEEee---cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEE
Confidence 765544433 333333 336799999999999999976654 34457789999999999864 57899999999999
Q ss_pred EEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEE
Q 009597 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 476 (531)
Q Consensus 397 wd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~ 476 (531)
||++.+..+..+. .|...|.+++|+|++++|++++.|+.|++||+++...+. .+..+ ..+.++.|+|++.++
T Consensus 200 ~d~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~---~~~~~---~~v~~~~~~~~~~~~- 271 (340)
T 4aow_A 200 WNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY---TLDGG---DIINALCFSPNRYWL- 271 (340)
T ss_dssp EETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE---EEECS---SCEEEEEECSSSSEE-
T ss_pred EECCCCceeeEec-CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceee---eecCC---ceEEeeecCCCCcee-
Confidence 9999998877765 489999999999999999999999999999999876553 33333 458889999988765
Q ss_pred EEeCCCcEEEEECCCCeEEEEee---------ccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 477 SGDGEGKCWFWDWKSCKVFRTLK---------CHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 477 sgs~dg~I~iwd~~~~~~~~~~~---------~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+++.|+.|+|||++++..+..+. +|...|.+++|+| ++.+|++|+.||.|+|||
T Consensus 272 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 272 CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEe
Confidence 55678999999999988776653 5888999999999 788999999999999997
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-32 Score=280.03 Aligned_cols=254 Identities=20% Similarity=0.294 Sum_probs=208.1
Q ss_pred CeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCC--CCcEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCC
Q 009597 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTE--TGQVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDK 350 (531)
Q Consensus 274 ~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~--t~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg 350 (531)
|+++..+.+|...|++++|+|++++|++|+.||.|+|||+. +++.+..+..+ ..+.++.|.+.. .+.+|++|+.||
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~l~s~~~dg 79 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK-FGTILASCSYDG 79 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG-GCSEEEEEETTS
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCC-CCCEEEEeccCC
Confidence 45678899999999999999999999999999999999998 55666666543 334455555432 247899999999
Q ss_pred eEEEEECCCCc--eeEEEcccCCCeeEEEEecC--CCEEEEEeCCCCEEEEEcCCCeEE-EEeeCCCCCCccEEEEeC--
Q 009597 351 KIVQWDMNTKE--ITQEYDQHLGAVNTITFVDS--NRRFVTSSDDKSLRVWEFGIPVVI-KYISEPHMHSMPSISLHP-- 423 (531)
Q Consensus 351 ~I~iwd~~t~~--~~~~~~~h~~~I~~l~~sp~--~~~l~s~s~Dg~I~iwd~~~~~~~-~~~~~~~~~~v~~v~~sp-- 423 (531)
.|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++..... ......|...|.+++|+|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 99999999987 77888889999999999999 999999999999999999887321 222335888999999999
Q ss_pred -----------CCCEEEEEEcCCeEEEEEcCCccee-ceeeeecCCccccceEEEEEcCC---CCEEEEEeCCCcEEEEE
Q 009597 424 -----------NTNWLAAQSLDNQILIYSTRERFQL-NKKKRFAGHIVAGYACQVNFSPD---GRFVMSGDGEGKCWFWD 488 (531)
Q Consensus 424 -----------~~~~l~s~s~Dg~I~iwd~~~~~~~-~~~~~~~~~~~~~~v~~l~~spd---g~~l~sgs~dg~I~iwd 488 (531)
++.+|++++.|+.|++||++..... .....+.+|. ..+.+++|+|+ +.+|++++.||.|+|||
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~--~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc--CcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 6999999999999999999875433 2334566664 56999999999 89999999999999999
Q ss_pred CCCCe-----EEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 489 WKSCK-----VFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 489 ~~~~~-----~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++++. .+.....|...|.+++|+| ++.+|++++.||.|++||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEESSSSEEEEE
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcC-CCCEEEEecCCCcEEEEe
Confidence 98863 2222234888999999999 778999999999999996
No 49
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-32 Score=274.80 Aligned_cols=249 Identities=16% Similarity=0.333 Sum_probs=207.4
Q ss_pred EEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCC----cEEEEccC-CCcceEEEEccCCCCCcEEEEeeCCCeE
Q 009597 278 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG----QVIRTFST-GKIPYVVKLNPDDDKQNILLAGMSDKKI 352 (531)
Q Consensus 278 ~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~----~~i~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~dg~I 352 (531)
..+.+|.+.|++++|+|++++|++|+.||.|+|||+.++ +.+..+.. ...+.++.|.+.. ++.+|++|+.||.|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPE-YGRIIASASYDKTV 83 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGG-GCSEEEEEETTSCE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCC-CCCEEEEEcCCCeE
Confidence 456899999999999999999999999999999999876 35555543 2334555555531 24789999999999
Q ss_pred EEEECCCC---------ceeEEEcccCCCeeEEEEecC--CCEEEEEeCCCCEEEEEcCCCeEEEEee------------
Q 009597 353 VQWDMNTK---------EITQEYDQHLGAVNTITFVDS--NRRFVTSSDDKSLRVWEFGIPVVIKYIS------------ 409 (531)
Q Consensus 353 ~iwd~~t~---------~~~~~~~~h~~~I~~l~~sp~--~~~l~s~s~Dg~I~iwd~~~~~~~~~~~------------ 409 (531)
++||++++ +.+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++..+..+.
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 99999887 567888999999999999999 9999999999999999998764322111
Q ss_pred CCCCCCccEEEEeCC---CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCC----CEEEEEeCCC
Q 009597 410 EPHMHSMPSISLHPN---TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG----RFVMSGDGEG 482 (531)
Q Consensus 410 ~~~~~~v~~v~~sp~---~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg----~~l~sgs~dg 482 (531)
..+...+.+++|+|+ +.+|++++.++.+.+|+..... ......+.+|. ..|.+++|+|++ .+|++|+.||
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~--~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK-LHVAAKLPGHK--SLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-EEEEEECCCCC--SCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-eeeeeecCCCC--cceeEEEECCCCCCcceEEEEEcCCC
Confidence 246778999999997 9999999999999888776653 23345566664 569999999998 8999999999
Q ss_pred cEEEEECCCC----------------------------------------------eEEEEeeccCCcEEEEEEecCCCC
Q 009597 483 KCWFWDWKSC----------------------------------------------KVFRTLKCHEGVCIGCEWHPLEQS 516 (531)
Q Consensus 483 ~I~iwd~~~~----------------------------------------------~~~~~~~~h~~~V~~v~~~p~~~~ 516 (531)
.|++||++.+ +.+..+.+|...|.+++|+| ++.
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~ 319 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL-TGT 319 (351)
T ss_dssp CEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS-SSC
T ss_pred eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC-CCC
Confidence 9999999864 67788889999999999999 778
Q ss_pred EEEEEeCCCCEEeeC
Q 009597 517 KVATCGWDGLIKYWD 531 (531)
Q Consensus 517 ~l~t~s~Dg~I~iWD 531 (531)
+|++|+.||.|++||
T Consensus 320 ~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 320 ILSSAGDDGKVRLWK 334 (351)
T ss_dssp CEEEEETTSCEEEEE
T ss_pred EEEEecCCCcEEEEe
Confidence 999999999999996
No 50
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.9e-32 Score=275.98 Aligned_cols=278 Identities=14% Similarity=0.228 Sum_probs=225.8
Q ss_pred HHhhhh-ccCCCCCC---CceeeeeecccCeeeEEe-cCccCceEEEEEccC---CCEEEEEecCCeEEEEeCCCCc-EE
Q 009597 249 AKKKEE-KGNAGGEK---GEHVEDKSTFHGKCMRTY-MGHSKAVRDISFCND---GTKFLTASYDKNIKYWDTETGQ-VI 319 (531)
Q Consensus 249 ~~~~~~-~~~~~~~~---~~~i~~~~~~~~~~~~~l-~gH~~~V~~l~fspd---g~~l~s~s~Dg~I~vWd~~t~~-~i 319 (531)
.+.+++ .+++.++. ++.+.+|+...++..... .+|...|.+++|+|+ +.+|++|+.||.|++||+.+++ .+
T Consensus 25 ~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 104 (357)
T 3i2n_A 25 KWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPV 104 (357)
T ss_dssp EECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCS
T ss_pred EEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccE
Confidence 344544 34555554 899999999888776544 479999999999998 6999999999999999999988 77
Q ss_pred EEccCCC-cceEEEEcc---CCCCCcEEEEeeCCCeEEEEECCCCc-eeEEEcccCC----CeeEEE----EecCCCEEE
Q 009597 320 RTFSTGK-IPYVVKLNP---DDDKQNILLAGMSDKKIVQWDMNTKE-ITQEYDQHLG----AVNTIT----FVDSNRRFV 386 (531)
Q Consensus 320 ~~~~~~~-~~~~~~~~~---~~~~~~~l~sg~~dg~I~iwd~~t~~-~~~~~~~h~~----~I~~l~----~sp~~~~l~ 386 (531)
..+..+. ....+.+.+ ..+.+.+|++|+.||.|++||+++++ .+..+..|.+ .|.++. |+|++++|+
T Consensus 105 ~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~ 184 (357)
T 3i2n_A 105 YSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVC 184 (357)
T ss_dssp EEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEE
T ss_pred EEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEE
Confidence 7775433 334444432 23455789999999999999999887 7888877665 899998 678999999
Q ss_pred EEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeC---CCCEEEEEEcCCeEEEEEcCCcceeceee--eecCCcccc
Q 009597 387 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP---NTNWLAAQSLDNQILIYSTRERFQLNKKK--RFAGHIVAG 461 (531)
Q Consensus 387 s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp---~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~--~~~~~~~~~ 461 (531)
+++.|+.|++||++++...... .+...|.+++|+| ++.+|++++.||.|++||+++...+.... .+.+| ..
T Consensus 185 ~~~~d~~i~i~d~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--~~ 260 (357)
T 3i2n_A 185 AGYDNGDIKLFDLRNMALRWET--NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAH--KS 260 (357)
T ss_dssp EEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECC--SS
T ss_pred EEccCCeEEEEECccCceeeec--CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCC--cC
Confidence 9999999999999999875543 3788999999999 99999999999999999998865543332 23355 45
Q ss_pred ceEEEEEcCCCC-EEEEEeCCCcEEEEECCCC-------------------eEEEEeeccCCcEEEEEEecCCCCEEE-E
Q 009597 462 YACQVNFSPDGR-FVMSGDGEGKCWFWDWKSC-------------------KVFRTLKCHEGVCIGCEWHPLEQSKVA-T 520 (531)
Q Consensus 462 ~v~~l~~spdg~-~l~sgs~dg~I~iwd~~~~-------------------~~~~~~~~h~~~V~~v~~~p~~~~~l~-t 520 (531)
.+.+++|+|++. +|++|+.||.|++||++.+ +.+..+.+|...|.+++|+| ++.+|+ +
T Consensus 261 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~s 339 (357)
T 3i2n_A 261 TVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSP-DKRGLCVC 339 (357)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECS-SSTTEEEE
T ss_pred CEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcC-CCCeEEEE
Confidence 699999999998 8999999999999998753 56788889999999999999 556666 8
Q ss_pred EeCCCCEEeeC
Q 009597 521 CGWDGLIKYWD 531 (531)
Q Consensus 521 ~s~Dg~I~iWD 531 (531)
++.||.|++||
T Consensus 340 ~~~d~~i~iw~ 350 (357)
T 3i2n_A 340 SSFDQTVRVLI 350 (357)
T ss_dssp EETTSEEEEEE
T ss_pred ecCCCcEEEEE
Confidence 99999999997
No 51
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-33 Score=288.42 Aligned_cols=264 Identities=16% Similarity=0.285 Sum_probs=223.8
Q ss_pred CCCceeeeeecccCe---eeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCC----CcEEEEccCC-CcceEEE
Q 009597 261 EKGEHVEDKSTFHGK---CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTG-KIPYVVK 332 (531)
Q Consensus 261 ~~~~~i~~~~~~~~~---~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t----~~~i~~~~~~-~~~~~~~ 332 (531)
..++.+++|+...+. ++..+ .|...|++++|+|++++|++++.||.|+|||+.+ .+.+..+..+ ..+..+.
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~ 120 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVK 120 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEE
T ss_pred CCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEE
Confidence 788899999988775 44444 5999999999999999999999999999999987 4467766533 3456677
Q ss_pred EccCCCCCcEEEEeeCCCeEEEEECCCCc------eeE---EEcccCCCeeEEEEecC-CCEEEEEeCCCCEEEEEcCCC
Q 009597 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKE------ITQ---EYDQHLGAVNTITFVDS-NRRFVTSSDDKSLRVWEFGIP 402 (531)
Q Consensus 333 ~~~~~~~~~~l~sg~~dg~I~iwd~~t~~------~~~---~~~~h~~~I~~l~~sp~-~~~l~s~s~Dg~I~iwd~~~~ 402 (531)
++++ .+.+|++++.|+.|++||+.+++ ... .+..|...|.+++|+|+ +.+|++++.|+.|++||++++
T Consensus 121 ~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 198 (416)
T 2pm9_A 121 FNAK--QDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK 198 (416)
T ss_dssp ECSS--STTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT
T ss_pred EcCC--CCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC
Confidence 7664 24689999999999999999876 333 33679999999999998 789999999999999999999
Q ss_pred eEEEEeeCCC-----CCCccEEEEeCCC-CEEEEEEcCC---eEEEEEcCCcceeceeeeec-CCccccceEEEEEcC-C
Q 009597 403 VVIKYISEPH-----MHSMPSISLHPNT-NWLAAQSLDN---QILIYSTRERFQLNKKKRFA-GHIVAGYACQVNFSP-D 471 (531)
Q Consensus 403 ~~~~~~~~~~-----~~~v~~v~~sp~~-~~l~s~s~Dg---~I~iwd~~~~~~~~~~~~~~-~~~~~~~v~~l~~sp-d 471 (531)
..+..+.... ...|.+++|+|++ .+|++++.|+ .|++||+++.... ...+. +| ...+.+++|+| +
T Consensus 199 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~--~~~~~~~~--~~~v~~~~~s~~~ 274 (416)
T 2pm9_A 199 KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP--LQTLNQGH--QKGILSLDWCHQD 274 (416)
T ss_dssp EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC--SBCCCSCC--SSCEEEEEECSSC
T ss_pred CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC--cEEeecCc--cCceeEEEeCCCC
Confidence 8887776532 7889999999987 6899999998 9999999875322 23344 55 35699999999 9
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 472 GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 472 g~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+.+|++++.||.|++||+++++++..+..|...|.+++|+|++..+|++++.||.|++||
T Consensus 275 ~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~ 334 (416)
T 2pm9_A 275 EHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQT 334 (416)
T ss_dssp SSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEE
T ss_pred CCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEE
Confidence 999999999999999999999999999999999999999995448999999999999996
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=9.7e-32 Score=268.28 Aligned_cols=269 Identities=15% Similarity=0.238 Sum_probs=219.0
Q ss_pred HhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEc---c---
Q 009597 250 KKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF---S--- 323 (531)
Q Consensus 250 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~---~--- 323 (531)
.+++++.++.+...+.+..|............+|...|++++|+|++++|++++ ||.|++||+.++.....+ .
T Consensus 17 ~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~ 95 (337)
T 1gxr_A 17 VTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLN 95 (337)
T ss_dssp ECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSC
T ss_pred ECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccC
Confidence 445556555444444444444333334444458999999999999999999999 999999999876533222 2
Q ss_pred CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc--eeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCC
Q 009597 324 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE--ITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI 401 (531)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~--~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~ 401 (531)
.......+.+.+ .+.+|++++.|+.|++||+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 96 ~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~ 172 (337)
T 1gxr_A 96 RDNYIRSCKLLP---DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 172 (337)
T ss_dssp TTSBEEEEEECT---TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEEcC---CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 233345555555 34689999999999999999887 6677888999999999999999999999999999999999
Q ss_pred CeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC
Q 009597 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE 481 (531)
Q Consensus 402 ~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d 481 (531)
+..+..+.. |...+.+++|+|++++|++++.|+.|++||++++..+... . + ...+.+++|+|++++|++++.+
T Consensus 173 ~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~---~-~--~~~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 173 QTLVRQFQG-HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH---D-F--TSQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp TEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE---E-C--SSCEEEEEECTTSSEEEEEETT
T ss_pred Cceeeeeec-ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee---c-C--CCceEEEEECCCCCEEEEEcCC
Confidence 988777654 8889999999999999999999999999999987654332 1 2 3558889999999999999999
Q ss_pred CcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 482 GKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 482 g~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|.|++||+.+++.. .+..|...|.+++|+| ++.+|++++.||.|++||
T Consensus 246 ~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~ 293 (337)
T 1gxr_A 246 SNVEVLHVNKPDKY-QLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWR 293 (337)
T ss_dssp SCEEEEETTSSCEE-EECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred CcEEEEECCCCCeE-EEcCCccceeEEEECC-CCCEEEEecCCCcEEEEE
Confidence 99999999988764 5678999999999999 788999999999999997
No 53
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-31 Score=265.52 Aligned_cols=263 Identities=16% Similarity=0.213 Sum_probs=225.9
Q ss_pred hhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCC---cEEEEccCCCcc
Q 009597 252 KEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG---QVIRTFSTGKIP 328 (531)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~---~~i~~~~~~~~~ 328 (531)
+++..+++++.++.+.+|+...++....+.+|...|.+++|+|++++|++++.||.|++|++... +.+..+. .+..
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~~~~ 105 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI-GHQG 105 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC-CCSS
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh-hccc
Confidence 45666788899999999999999999999999999999999999999999999999999998664 4455553 3333
Q ss_pred eEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEec-CCCEEEEEeCCCCEEEEEcCCCeEEEE
Q 009597 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVD-SNRRFVTSSDDKSLRVWEFGIPVVIKY 407 (531)
Q Consensus 329 ~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp-~~~~l~s~s~Dg~I~iwd~~~~~~~~~ 407 (531)
.+..+.+. +.++++++.||.|++|| .++.+..+..|...|.++.|+| ++.+|++++.|+.|++|| .......
T Consensus 106 ~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~ 178 (313)
T 3odt_A 106 NVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKT 178 (313)
T ss_dssp CEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEE
T ss_pred CEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEE
Confidence 44444442 36899999999999999 7788889999999999999998 999999999999999999 4455566
Q ss_pred eeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEE
Q 009597 408 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487 (531)
Q Consensus 408 ~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iw 487 (531)
+...+...+.+++|+|++. |++++.|+.|++||++++..+ ..+.+|. ..+.+++|+|++ .|++++.||.|++|
T Consensus 179 ~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~---~~~~~~~--~~i~~~~~~~~~-~l~~~~~dg~v~iw 251 (313)
T 3odt_A 179 FSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVL---RTYEGHE--SFVYCIKLLPNG-DIVSCGEDRTVRIW 251 (313)
T ss_dssp ECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEE---EEEECCS--SCEEEEEECTTS-CEEEEETTSEEEEE
T ss_pred EeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhh---hhhhcCC--ceEEEEEEecCC-CEEEEecCCEEEEE
Confidence 6555889999999999988 999999999999999987554 4455563 569999999999 58899999999999
Q ss_pred ECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 488 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 488 d~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|+++++++..+..|...|.+++|+| ++. +++++.||.|++||
T Consensus 252 d~~~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 252 SKENGSLKQVITLPAISIWSVDCMS-NGD-IIVGSSDNLVRIFS 293 (313)
T ss_dssp CTTTCCEEEEEECSSSCEEEEEECT-TSC-EEEEETTSCEEEEE
T ss_pred ECCCCceeEEEeccCceEEEEEEcc-CCC-EEEEeCCCcEEEEe
Confidence 9999999999999999999999999 555 67799999999997
No 54
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.1e-33 Score=281.59 Aligned_cols=266 Identities=17% Similarity=0.239 Sum_probs=221.2
Q ss_pred CCCCCceeeeeecccCeeeEEecC-----ccCceEEEEEccC----CCEEEEEecCCeEEEEeCCCCcEEEEccC-CCcc
Q 009597 259 GGEKGEHVEDKSTFHGKCMRTYMG-----HSKAVRDISFCND----GTKFLTASYDKNIKYWDTETGQVIRTFST-GKIP 328 (531)
Q Consensus 259 ~~~~~~~i~~~~~~~~~~~~~l~g-----H~~~V~~l~fspd----g~~l~s~s~Dg~I~vWd~~t~~~i~~~~~-~~~~ 328 (531)
.+..++.+.+|+...++.+..+.. |...|++++|+|+ +.+|++|+.||.|++||+.+++.+..+.. ...+
T Consensus 39 ~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i 118 (366)
T 3k26_A 39 ATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 118 (366)
T ss_dssp EEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCE
T ss_pred EECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcE
Confidence 334445899999988888877765 4577999999998 67999999999999999999999988863 3344
Q ss_pred eEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEE---cccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEE
Q 009597 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY---DQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVI 405 (531)
Q Consensus 329 ~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~---~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~ 405 (531)
..+.|++ ..+.+|++|+.||.|++||+++++.+..+ ..|...|.+++|+|++++|++++.|+.|++||++++...
T Consensus 119 ~~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 119 NELKFHP--RDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp EEEEECS--SCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHH
T ss_pred EEEEECC--CCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccc
Confidence 5555555 23478999999999999999999999988 789999999999999999999999999999999865432
Q ss_pred EE---------------------------eeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCccee----------
Q 009597 406 KY---------------------------ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL---------- 448 (531)
Q Consensus 406 ~~---------------------------~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~---------- 448 (531)
.. ....|...|.+++|+ +++|++++.|+.|++||+++....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 274 (366)
T 3k26_A 197 NAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESN 274 (366)
T ss_dssp HHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCC
T ss_pred cccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcc
Confidence 11 112388899999999 789999999999999999875431
Q ss_pred -ceeeeecCCccccceEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe----EEEEeecc--CCcEEEEEEecCCCCEEE
Q 009597 449 -NKKKRFAGHIVAGYACQVNFSPD--GRFVMSGDGEGKCWFWDWKSCK----VFRTLKCH--EGVCIGCEWHPLEQSKVA 519 (531)
Q Consensus 449 -~~~~~~~~~~~~~~v~~l~~spd--g~~l~sgs~dg~I~iwd~~~~~----~~~~~~~h--~~~V~~v~~~p~~~~~l~ 519 (531)
.....+.+|. ..+.+++|+|+ +++|++|+.||.|++||+.+++ .+..+..| ...|.+++|+| ++.+|+
T Consensus 275 ~~~~~~~~~~~--~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 351 (366)
T 3k26_A 275 VTILGRFDYSQ--CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR-DSSILI 351 (366)
T ss_dssp EEEEEEEECSS--CCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECT-TSSEEE
T ss_pred hheeccccccC--CcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCC-CCCeEE
Confidence 2234455553 44777999999 9999999999999999999875 45577777 78999999999 888999
Q ss_pred EEeCCCCEEeeC
Q 009597 520 TCGWDGLIKYWD 531 (531)
Q Consensus 520 t~s~Dg~I~iWD 531 (531)
+++.||.|++||
T Consensus 352 s~~~dg~i~iwd 363 (366)
T 3k26_A 352 AVCDDASIWRWD 363 (366)
T ss_dssp EEETTSEEEEEE
T ss_pred EEeCCCEEEEEE
Confidence 999999999997
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.6e-33 Score=285.48 Aligned_cols=274 Identities=13% Similarity=0.119 Sum_probs=229.3
Q ss_pred HHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEcc-CCC
Q 009597 248 YAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS-TGK 326 (531)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~-~~~ 326 (531)
++..++++.++.+..++.+++|+...++....+.+| ..+....|++++++|++|+.||.|+|||+.+++.+..+. +..
T Consensus 62 ~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~ 140 (420)
T 3vl1_A 62 NTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVS 140 (420)
T ss_dssp CEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSS
T ss_pred eeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccC
Confidence 445677788888888999999999988888888877 455666789999999999999999999999999988874 334
Q ss_pred cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEE
Q 009597 327 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIK 406 (531)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~ 406 (531)
.+..+.|+++ +.+|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++++..+.
T Consensus 141 ~v~~~~~~~~---~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 141 EITKLKFFPS---GEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp CEEEEEECTT---SSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred ccEEEEECCC---CCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 4556666663 3689999999999999999999999999999999999999999999999999999999999998887
Q ss_pred EeeCC--C---------------------CCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccce
Q 009597 407 YISEP--H---------------------MHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 463 (531)
Q Consensus 407 ~~~~~--~---------------------~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v 463 (531)
.+... + ...+.+++|+|++++|++++.||.|++||++++..+... ..+| ...+
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~--~~~v 293 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQL--PSKF--TCSC 293 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEE--CCTT--SSCE
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEc--cccc--CCCc
Confidence 76531 2 345666677899999999999999999999987654332 2234 3569
Q ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEECCCCe-EEEEeec-cCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 464 CQVNFSPDGR-FVMSGDGEGKCWFWDWKSCK-VFRTLKC-HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 464 ~~l~~spdg~-~l~sgs~dg~I~iwd~~~~~-~~~~~~~-h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++|+|++. +|++|+.||.|++||+++++ ++..+.. |...|.++.| + ++.+|++++.||.|++||
T Consensus 294 ~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-A-AGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-E-TTEEEEEETTTEEEEEEE
T ss_pred eeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-C-CCCEEEEecCCccEEEEe
Confidence 9999999999 99999999999999999874 4777776 5667777755 4 467999999999999996
No 56
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.3e-31 Score=263.90 Aligned_cols=271 Identities=15% Similarity=0.246 Sum_probs=222.3
Q ss_pred HHHhhhhccCCCCCCCceeeeeecccCeeeEEec--CccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC
Q 009597 248 YAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYM--GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG 325 (531)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~--gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~ 325 (531)
+.+++++ +++.+ .++.|++|+..++++++.+. +|...|++++|+|++++|++|+.||+|+|||+++++++..+..+
T Consensus 31 l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h 108 (318)
T 4ggc_A 31 VDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSH 108 (318)
T ss_dssp EEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCc
Confidence 3455544 34444 47889999999999888775 67888999999999999999999999999999999999988654
Q ss_pred CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC-ceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeE
Q 009597 326 KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK-EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVV 404 (531)
Q Consensus 326 ~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~-~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~ 404 (531)
...+..+.+.+ .++++|+.++.+++|+.... ..+..+.+|...+.++.+.+++++|++++.|+.|++||+++++.
T Consensus 109 -~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 109 -SARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp -SSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred -cceEEEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 34455555533 58999999999999999775 45677889999999999999999999999999999999987532
Q ss_pred E---EEeeCCCCCCccEEEEeCCCCEE---EEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEE
Q 009597 405 I---KYISEPHMHSMPSISLHPNTNWL---AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG 478 (531)
Q Consensus 405 ~---~~~~~~~~~~v~~v~~sp~~~~l---~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sg 478 (531)
. ......+...|.+++++|.+..+ ++++.++.|++||......... .. + ...+..+.|+|++..++++
T Consensus 185 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~---~~-~--~~~v~~~~~~~~~~~~~~~ 258 (318)
T 4ggc_A 185 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA---VD-A--HSQVCSILWSPHYKELISG 258 (318)
T ss_dssp BSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEE---EE-C--SSCEEEEEEETTTTEEEEE
T ss_pred cccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccc---cc-c--eeeeeeeeecccccceEEE
Confidence 1 12233477889999999966543 3556789999999987654322 11 2 2447789999999988775
Q ss_pred e--CCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 479 D--GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 479 s--~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+ .|+.|+|||+++++++..+.+|.+.|.+++|+| ++.+|+|||.||+|+|||
T Consensus 259 sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 259 HGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWR 312 (318)
T ss_dssp ECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEEC
T ss_pred EEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEE
Confidence 4 799999999999999999999999999999999 788999999999999997
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.8e-32 Score=279.64 Aligned_cols=273 Identities=12% Similarity=0.126 Sum_probs=225.6
Q ss_pred hhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-Ccce
Q 009597 251 KKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KIPY 329 (531)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~~~ 329 (531)
.+++..++.+..++.+.+|+...++++..+.+|...|++++|+|++++|++|+.|+.|++||+.+++.+..+..+ ..+.
T Consensus 106 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~ 185 (420)
T 3vl1_A 106 KLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVT 185 (420)
T ss_dssp CSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEE
T ss_pred ecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEE
Confidence 345566777888999999999999999999999999999999999999999999999999999999988888643 3345
Q ss_pred EEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcc---cCCCeeEE---------------------EEecCCCEE
Q 009597 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQ---HLGAVNTI---------------------TFVDSNRRF 385 (531)
Q Consensus 330 ~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~---h~~~I~~l---------------------~~sp~~~~l 385 (531)
.+.++++ +.+|++|+.|+.|++||+++++.+..+.. |...|.++ +|+|++++|
T Consensus 186 ~~~~~~~---~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (420)
T 3vl1_A 186 DIAIIDR---GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYV 262 (420)
T ss_dssp EEEEETT---TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEE
T ss_pred EEEEcCC---CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEE
Confidence 5666663 46899999999999999999999998875 33445544 456889999
Q ss_pred EEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCC-EEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceE
Q 009597 386 VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN-WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 464 (531)
Q Consensus 386 ~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~ 464 (531)
++++.||.|++||++++..+..+...|...|.+++|+|++. +|++++.||.|++||++++... ...+.+|. ...+.
T Consensus 263 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~--~~~~~~~~-~~~v~ 339 (420)
T 3vl1_A 263 IAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP--VGEFLINE-GTPIN 339 (420)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC--SEEEEEST-TSCEE
T ss_pred EEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc--hhhhhccC-CCCce
Confidence 99999999999999999888888777889999999999998 9999999999999999886432 23333332 34566
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCC---------eEEEEeeccCCcEEEEEEecCCCC---EEEEEeCCCCEEeeC
Q 009597 465 QVNFSPDGRFVMSGDGEGKCWFWDWKSC---------KVFRTLKCHEGVCIGCEWHPLEQS---KVATCGWDGLIKYWD 531 (531)
Q Consensus 465 ~l~~spdg~~l~sgs~dg~I~iwd~~~~---------~~~~~~~~h~~~V~~v~~~p~~~~---~l~t~s~Dg~I~iWD 531 (531)
++ +.+++.+|++++.||.|++||+... .....+..|.+.|.+++|+| ++. .|++++.+|.+.+|+
T Consensus 340 ~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 340 NV-YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVS-DDESNGEVLEVGKNNFCALYN 416 (420)
T ss_dssp EE-EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEEC-CSSSSCEEEEEETTTEEEEEE
T ss_pred EE-EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEcc-CCCCcceEEEEcCCceEEEEe
Confidence 66 4567889999999999999998763 22334567888999999999 555 677778899999995
No 58
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.1e-31 Score=275.66 Aligned_cols=264 Identities=16% Similarity=0.292 Sum_probs=227.3
Q ss_pred hhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-CcceEE
Q 009597 253 EEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KIPYVV 331 (531)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~~~~~ 331 (531)
++..+++++.++.|++|+..+++++..+.+|.+.|.+++|++++ +|++|+.||+|++||+.+++++..+..+ ..+.++
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l 209 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL 209 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEE
Confidence 34567788999999999999999999999999999999999988 8999999999999999999999988643 345566
Q ss_pred EEccCCCCCcEEEEeeCCCeEEEEECCCCce-----------------------eEEEcccCCCeeEEEEecCCCEEEEE
Q 009597 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEI-----------------------TQEYDQHLGAVNTITFVDSNRRFVTS 388 (531)
Q Consensus 332 ~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~-----------------------~~~~~~h~~~I~~l~~sp~~~~l~s~ 388 (531)
.+.+.+ .+.++++|+.||.|++||++++.. +..+.+|...|.++ ++++++|+++
T Consensus 210 ~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~ 286 (464)
T 3v7d_B 210 DIVEYK-NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSG 286 (464)
T ss_dssp EEEESS-SCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEE
T ss_pred EEecCC-CCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEE
Confidence 666543 347899999999999999987652 55678888888887 5678999999
Q ss_pred eCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEE
Q 009597 389 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNF 468 (531)
Q Consensus 389 s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~ 468 (531)
+.|+.|++||++++..+..+. .|...|.+++|+|++++|++++.||.|++||++++..+ ..+.+|. ..+.++.|
T Consensus 287 ~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~---~~~~~h~--~~v~~~~~ 360 (464)
T 3v7d_B 287 SYDNTLIVWDVAQMKCLYILS-GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM---YTLQGHT--ALVGLLRL 360 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE---EEECCCS--SCEEEEEE
T ss_pred eCCCeEEEEECCCCcEEEEec-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE---EEEeCCC--CcEEEEEE
Confidence 999999999999998887775 48899999999999999999999999999999987554 4556664 55888888
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 469 SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 469 spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+ +.+|++|+.||.|++||+.++.....+. |...+..++|+| ++.+|++++ ||.|++||
T Consensus 361 ~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~-dg~i~iwd 418 (464)
T 3v7d_B 361 S--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYV-SDNILVSGS-ENQFNIYN 418 (464)
T ss_dssp C--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEE-CSSEEEEEE-TTEEEEEE
T ss_pred c--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEe-CCCEEEEec-CCeEEEEE
Confidence 7 6899999999999999999988766664 666778889999 778899888 99999997
No 59
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-33 Score=288.96 Aligned_cols=275 Identities=15% Similarity=0.189 Sum_probs=228.0
Q ss_pred HHhhhhccCCCCCCCceeeeeeccc----CeeeEEecCccCceEEEEEccC-CCEEEEEecCCeEEEEeCCCCc------
Q 009597 249 AKKKEEKGNAGGEKGEHVEDKSTFH----GKCMRTYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDTETGQ------ 317 (531)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~l~gH~~~V~~l~fspd-g~~l~s~s~Dg~I~vWd~~t~~------ 317 (531)
.+.+++..++.+..++.+.+|+... .+++..+.+|...|++++|+|+ +++|++++.|+.|++||+.+++
T Consensus 74 ~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 153 (416)
T 2pm9_A 74 DWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY 153 (416)
T ss_dssp EECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC
T ss_pred EECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc
Confidence 3456677788888899999999877 4689999999999999999998 8999999999999999999876
Q ss_pred EEEEc----cCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEccc------CCCeeEEEEecCC-CEEE
Q 009597 318 VIRTF----STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQH------LGAVNTITFVDSN-RRFV 386 (531)
Q Consensus 318 ~i~~~----~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h------~~~I~~l~~sp~~-~~l~ 386 (531)
....+ ........+.+++. .+.+|++++.||.|++||+++++.+..+..| ...|.+++|+|++ .+|+
T Consensus 154 ~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 154 TPLTPGQSMSSVDEVISLAWNQS--LAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp CCBCCCCSCCSSCCCCEEEECSS--CTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred cccccccccCCCCCeeEEEeCCC--CCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 33322 12334556666654 3478999999999999999999999999877 7899999999997 6899
Q ss_pred EEeCCC---CEEEEEcCCC-eEEEEeeCCCCCCccEEEEeC-CCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCcccc
Q 009597 387 TSSDDK---SLRVWEFGIP-VVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461 (531)
Q Consensus 387 s~s~Dg---~I~iwd~~~~-~~~~~~~~~~~~~v~~v~~sp-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 461 (531)
+++.|+ .|++||++.+ ..+..+...|...|.+++|+| ++.+|++++.|+.|++||++++..+ ..+.+|. .
T Consensus 232 ~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~---~~~~~~~--~ 306 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL---SQFPARG--N 306 (416)
T ss_dssp EEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE---EEEECSS--S
T ss_pred EEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc---eeecCCC--C
Confidence 999998 9999999986 344434325889999999999 9999999999999999999987554 4455563 4
Q ss_pred ceEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeEEEEee-----------------------------------ccCCcE
Q 009597 462 YACQVNFSPDG-RFVMSGDGEGKCWFWDWKSCKVFRTLK-----------------------------------CHEGVC 505 (531)
Q Consensus 462 ~v~~l~~spdg-~~l~sgs~dg~I~iwd~~~~~~~~~~~-----------------------------------~h~~~V 505 (531)
.+.+++|+|++ .+|++++.||.|+|||+.+........ .|...+
T Consensus 307 ~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (416)
T 2pm9_A 307 WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPS 386 (416)
T ss_dssp CCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCS
T ss_pred ceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCc
Confidence 58889999999 899999999999999998765322211 156678
Q ss_pred EEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 506 IGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 506 ~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++|+| ++.+|++++.||.|+|||
T Consensus 387 ~~~~~s~-dg~~la~~~~d~~v~~w~ 411 (416)
T 2pm9_A 387 PAAHWAF-GGKLVQITPDGKGVSITN 411 (416)
T ss_dssp CCCEEET-TTEEECBCTTSSCBCCBC
T ss_pred cceEEee-CCeEEEEeCCCCeEEEEE
Confidence 8999999 889999999999999997
No 60
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=292.60 Aligned_cols=271 Identities=10% Similarity=0.060 Sum_probs=202.0
Q ss_pred hhhhccCCCCCCCceeeeeecccCeee----EEecCccCceEEEEEccC------CCEEEEEecCCeEEEEeCCCCcEE-
Q 009597 251 KKEEKGNAGGEKGEHVEDKSTFHGKCM----RTYMGHSKAVRDISFCND------GTKFLTASYDKNIKYWDTETGQVI- 319 (531)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~l~gH~~~V~~l~fspd------g~~l~s~s~Dg~I~vWd~~t~~~i- 319 (531)
+++.+.+++++.++.|++|+...+++. .++.+|.+.|.+|+|+|+ +.+||+++.||+|+|||+.++...
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 466667788999999999998766542 457788999999999996 579999999999999999876421
Q ss_pred ----------EEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC-ceeEEEcccCCCeeEE--EEecCC-CE
Q 009597 320 ----------RTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK-EITQEYDQHLGAVNTI--TFVDSN-RR 384 (531)
Q Consensus 320 ----------~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~-~~~~~~~~h~~~I~~l--~~sp~~-~~ 384 (531)
..+..+ ..+.++.|++ + ..|++|+.||+|++||++++ .+...+.+|...|.+| .|+|++ .+
T Consensus 250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~--~--~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~ 325 (524)
T 2j04_B 250 HVFKMCEKPSLTLSLADSLITTFDFLS--P--TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTV 325 (524)
T ss_dssp SEEECCCSCSEEECCTTTCEEEEEESS--S--SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCE
T ss_pred ccceeecCceEEEEcCCCCEEEEEecC--C--CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeE
Confidence 233222 2234444443 3 47999999999999999976 4566788999999999 567887 89
Q ss_pred EEEEeCCCCEEEEEcCCCeEEEEeeCCCC--CCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccc
Q 009597 385 FVTSSDDKSLRVWEFGIPVVIKYISEPHM--HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462 (531)
Q Consensus 385 l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~--~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 462 (531)
|++++.|++|+|||++++..+..+.. |. ..|.+++|+|++..|++++.|++|++||++.+.++ ..+.+|. ..
T Consensus 326 laS~S~D~tvklWD~~~~~~~~~~~~-~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~---~~l~gH~--~~ 399 (524)
T 2j04_B 326 VSTVAVDGYFYIFNPKDIATTKTTVS-RFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV---HPLVSRE--TT 399 (524)
T ss_dssp EEEEETTSEEEEECGGGHHHHCEEEE-ECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC---EEEEECS--SC
T ss_pred EEEeccCCeEEEEECCCCCccccccc-ccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc---eeeecCC--Cc
Confidence 99999999999999988765443332 32 35889999999999999999999999999987554 3455664 56
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCC--------------------------------------------CeEEEEe
Q 009597 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKS--------------------------------------------CKVFRTL 498 (531)
Q Consensus 463 v~~l~~spdg~~l~sgs~dg~I~iwd~~~--------------------------------------------~~~~~~~ 498 (531)
|.+++|+|+|++|++|+.||+|++||+.. +.++..+
T Consensus 400 V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l 479 (524)
T 2j04_B 400 ITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKI 479 (524)
T ss_dssp EEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-----------
T ss_pred eEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeee
Confidence 99999999999999999999999987421 1123345
Q ss_pred eccCCcEEEEEEecCC--CCEEEEEeCCCCEEeeC
Q 009597 499 KCHEGVCIGCEWHPLE--QSKVATCGWDGLIKYWD 531 (531)
Q Consensus 499 ~~h~~~V~~v~~~p~~--~~~l~t~s~Dg~I~iWD 531 (531)
.+|...|.+|+|+|++ +..|++|+.||.|+||+
T Consensus 480 ~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 480 DAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp --CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred cCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 5688899999999943 35999999999999995
No 61
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.6e-30 Score=260.18 Aligned_cols=255 Identities=23% Similarity=0.350 Sum_probs=212.0
Q ss_pred eeeeecccCeeeEEecCccCceEEEEEccC-CCEEEEEecCCeEEEEeCCCCc-----EEEEccCC-CcceEEEEccCCC
Q 009597 266 VEDKSTFHGKCMRTYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDTETGQ-----VIRTFSTG-KIPYVVKLNPDDD 338 (531)
Q Consensus 266 i~~~~~~~~~~~~~l~gH~~~V~~l~fspd-g~~l~s~s~Dg~I~vWd~~t~~-----~i~~~~~~-~~~~~~~~~~~~~ 338 (531)
+......+.++..+|+||.+.|++|+|+|+ +++|+|||.|++|+|||+.+.+ +...+..+ ..+..+.|.+
T Consensus 20 ~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~--- 96 (340)
T 4aow_A 20 FQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS--- 96 (340)
T ss_dssp ------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT---
T ss_pred EEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC---
Confidence 344445566778899999999999999997 6899999999999999987654 34445332 3344555555
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccE
Q 009597 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPS 418 (531)
Q Consensus 339 ~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~ 418 (531)
.+.+|++|+.|+.|++|+............+...+..+.+++++.+|++++.|+.+++||+............|...+.+
T Consensus 97 dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~ 176 (340)
T 4aow_A 97 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSC 176 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEE
T ss_pred CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccc
Confidence 34689999999999999999999999999999999999999999999999999999999999887777666778899999
Q ss_pred EEEeCC--CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 009597 419 ISLHPN--TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFR 496 (531)
Q Consensus 419 v~~sp~--~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~ 496 (531)
++|+++ ..++++++.|+.|++||+++...+ ..+.+|. ..|.+++|+|++++|++|+.||.|++||+++.+++.
T Consensus 177 ~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~---~~~~~h~--~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 177 VRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK---TNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY 251 (340)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTTEEE---EEECCCS--SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEccCCCCcEEEEEcCCCEEEEEECCCCcee---eEecCCC--CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceee
Confidence 999885 467889999999999999987544 4456664 569999999999999999999999999999999999
Q ss_pred EeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 497 TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 497 ~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+..+ ..|.+++|+| ++ .+++++.|+.|++||
T Consensus 252 ~~~~~-~~v~~~~~~~-~~-~~~~~~~d~~i~iwd 283 (340)
T 4aow_A 252 TLDGG-DIINALCFSP-NR-YWLCAATGPSIKIWD 283 (340)
T ss_dssp EEECS-SCEEEEEECS-SS-SEEEEEETTEEEEEE
T ss_pred eecCC-ceEEeeecCC-CC-ceeeccCCCEEEEEE
Confidence 88855 5789999999 55 466677899999997
No 62
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.2e-32 Score=287.69 Aligned_cols=280 Identities=14% Similarity=0.154 Sum_probs=213.8
Q ss_pred HHHHHhh-hhccCCCCCCCceeeeeecccCe--eeEEecCccCceEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEE
Q 009597 246 EEYAKKK-EEKGNAGGEKGEHVEDKSTFHGK--CMRTYMGHSKAVRDISFCN-DGTKFLTASYDKNIKYWDTETGQVIRT 321 (531)
Q Consensus 246 ~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~--~~~~l~gH~~~V~~l~fsp-dg~~l~s~s~Dg~I~vWd~~t~~~i~~ 321 (531)
.++++.+ +..++++|+.++.|.+|+...++ .+..+.+|.+.|++|+|+| ++.+|+||+.||+|+|||++++.....
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~ 202 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVF 202 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEE
Confidence 3455555 45678899999999999976654 4556779999999999998 688999999999999999987654433
Q ss_pred ccCCC-c--ceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCC-EEEEEeCCCCEEEE
Q 009597 322 FSTGK-I--PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNR-RFVTSSDDKSLRVW 397 (531)
Q Consensus 322 ~~~~~-~--~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~-~l~s~s~Dg~I~iw 397 (531)
..... . ...+.++++ +.+|++|+.||.|++||++. +.+..+.+|...|.+++|+|++. +|++++.|++|+||
T Consensus 203 ~~~~~~~~~~~~~~~~~~---~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw 278 (435)
T 4e54_B 203 ASSDTINIWFCSLDVSAS---SRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW 278 (435)
T ss_dssp ECCSSCSCCCCCEEEETT---TTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE
T ss_pred eccCCCCccEEEEEECCC---CCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEE
Confidence 32222 2 234555553 46899999999999999974 56677889999999999999876 78899999999999
Q ss_pred EcCCCeEEEEe--eCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeec-CCccccceEEEEEcCCCCE
Q 009597 398 EFGIPVVIKYI--SEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA-GHIVAGYACQVNFSPDGRF 474 (531)
Q Consensus 398 d~~~~~~~~~~--~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~-~~~~~~~v~~l~~spdg~~ 474 (531)
|++.......+ ...|...|.+++|+|++.+|++++.||.|+|||+.++.......... .+.....+..+.|+|++.+
T Consensus 279 d~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (435)
T 4e54_B 279 DLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNL 358 (435)
T ss_dssp ETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSC
T ss_pred ecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCE
Confidence 99876543322 23588899999999999999999999999999998875543222111 0111112333567777766
Q ss_pred EEEEe------------CCCcEEEEECCCCeEEEEee-ccCCcEEEE-EEecCCCCEEEEEeCCCCEEeeC
Q 009597 475 VMSGD------------GEGKCWFWDWKSCKVFRTLK-CHEGVCIGC-EWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 475 l~sgs------------~dg~I~iwd~~~~~~~~~~~-~h~~~V~~v-~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++++. .++.|++||..+++++..+. +|...|.++ +|+| ++.+|++|+ |+.|+|||
T Consensus 359 ~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fsp-dg~~lasg~-d~~i~iW~ 427 (435)
T 4e54_B 359 IVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNP-MGDTLASAM-GYHILIWS 427 (435)
T ss_dssp EEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECT-TSSCEEEEC-SSEEEECC
T ss_pred EEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECC-CCCEEEEEc-CCcEEEEE
Confidence 66654 33579999999999988875 677788887 6999 778888876 88999997
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-31 Score=272.35 Aligned_cols=273 Identities=16% Similarity=0.237 Sum_probs=229.6
Q ss_pred HHHHHhhhhc-cCCCCCCCceeeeeec----ccCe------eeEEecC----------ccCceEEEEEccCCCEEEEEec
Q 009597 246 EEYAKKKEEK-GNAGGEKGEHVEDKST----FHGK------CMRTYMG----------HSKAVRDISFCNDGTKFLTASY 304 (531)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~~~i~~~~~----~~~~------~~~~l~g----------H~~~V~~l~fspdg~~l~s~s~ 304 (531)
.++.+.+++. .++.++.++.+.+|+. ..++ ....+.. |...|++++|+|++++|++++.
T Consensus 49 ~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 128 (425)
T 1r5m_A 49 VSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVE 128 (425)
T ss_dssp SEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEET
T ss_pred EEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeC
Confidence 4455677777 8888899999999999 7777 4555555 7889999999999999999999
Q ss_pred CCeEEEEeCCCCcEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCC-----------
Q 009597 305 DKNIKYWDTETGQVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA----------- 372 (531)
Q Consensus 305 Dg~I~vWd~~t~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~----------- 372 (531)
||.|++|| .+++.+..+..+ ..+..+.+.++ +.+|++++.|+.|++||+.+++.+..+..+...
T Consensus 129 dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 129 NGELRLWN-KTGALLNVLNFHRAPIVSVKWNKD---GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp TSCEEEEE-TTSCEEEEECCCCSCEEEEEECTT---SSEEEEEETTCCEEEEETTTTEEEEEECCC--------------
T ss_pred CCeEEEEe-CCCCeeeeccCCCccEEEEEECCC---CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence 99999999 677777777543 33455666553 468999999999999999999999999888777
Q ss_pred ----eeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCccee
Q 009597 373 ----VNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 448 (531)
Q Consensus 373 ----I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~ 448 (531)
+.++.|++++ .+++++.|+.|++||+..+..+..+. .|...|.+++|+|++++|++++.|+.|++||+++...+
T Consensus 205 ~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 282 (425)
T 1r5m_A 205 DGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLI-GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQ 282 (425)
T ss_dssp -CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCS
T ss_pred CcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeec-cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccc
Confidence 9999999875 68999999999999999887766664 48899999999999999999999999999999887544
Q ss_pred ceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEE
Q 009597 449 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 528 (531)
Q Consensus 449 ~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~ 528 (531)
..+.+| ...+.+++|+|++ +|++++.||.|++||+++++++..+..|...|.+++|+| ++.+|++++.||.|+
T Consensus 283 ---~~~~~~--~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~ 355 (425)
T 1r5m_A 283 ---NCFYGH--SQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ-DGQKYAVAFMDGQVN 355 (425)
T ss_dssp ---EEECCC--SSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECT-TSSEEEEEETTSCEE
T ss_pred ---eEecCC--CccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcC-CCCEEEEEECCCeEE
Confidence 344455 3568999999999 999999999999999999999999999999999999999 788999999999999
Q ss_pred eeC
Q 009597 529 YWD 531 (531)
Q Consensus 529 iWD 531 (531)
+||
T Consensus 356 i~~ 358 (425)
T 1r5m_A 356 VYD 358 (425)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
No 64
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.1e-31 Score=273.07 Aligned_cols=253 Identities=13% Similarity=0.205 Sum_probs=209.4
Q ss_pred eeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc------EEEEccC-CCcceEEEEccC-CCCC---cEE
Q 009597 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ------VIRTFST-GKIPYVVKLNPD-DDKQ---NIL 343 (531)
Q Consensus 275 ~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~------~i~~~~~-~~~~~~~~~~~~-~~~~---~~l 343 (531)
.....+.+|...|++|+|+| ++|++|+.||.|+||++.+++ .+..+.. ...+.++.|.+. ...+ .+|
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 46678899999999999998 799999999999999999987 5666553 334456666664 1124 689
Q ss_pred EEeeCCCeEEEEECCCCce-----eEEEccc-----CCCeeEEEEe----cCCCE-EEEEeCCCCEEEEEcCC------C
Q 009597 344 LAGMSDKKIVQWDMNTKEI-----TQEYDQH-----LGAVNTITFV----DSNRR-FVTSSDDKSLRVWEFGI------P 402 (531)
Q Consensus 344 ~sg~~dg~I~iwd~~t~~~-----~~~~~~h-----~~~I~~l~~s----p~~~~-l~s~s~Dg~I~iwd~~~------~ 402 (531)
++++.||.|++||+.+++. +..+..| ...|.+++|+ |++++ |++++.||.|++||+.. .
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 9999999999999998887 8889888 5999999999 99999 99999999999999987 4
Q ss_pred eEEE-----Eee------CCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCC-ccccceEEEEEcC
Q 009597 403 VVIK-----YIS------EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH-IVAGYACQVNFSP 470 (531)
Q Consensus 403 ~~~~-----~~~------~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~-~~~~~v~~l~~sp 470 (531)
..+. .+. ..|...|.+++|+|++ +|++++.|+.|++||+++...+..+....+| .....+.+++|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 3332 332 4578899999999999 9999999999999999987555333321114 0034588999999
Q ss_pred CCCEEEEEeCC---CcEEEEECCCCeEEEEeec-------------cCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 471 DGRFVMSGDGE---GKCWFWDWKSCKVFRTLKC-------------HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 471 dg~~l~sgs~d---g~I~iwd~~~~~~~~~~~~-------------h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++.+|++++.| |.|++||+++++.+..+.. |...|.+++|+| ++.+|++++.||.|++||
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEE
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECC-CCCEEEEEeCCCeEEEEE
Confidence 99999999999 9999999999999999998 999999999999 788999999999999997
No 65
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.2e-31 Score=276.74 Aligned_cols=268 Identities=19% Similarity=0.261 Sum_probs=217.7
Q ss_pred cCCCCCCCceeeeeecccC----eeeEEecCccCceEEEEEcc-CCCEEEEEecCCeEEEEeCCCC-------cEEEEcc
Q 009597 256 GNAGGEKGEHVEDKSTFHG----KCMRTYMGHSKAVRDISFCN-DGTKFLTASYDKNIKYWDTETG-------QVIRTFS 323 (531)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~----~~~~~l~gH~~~V~~l~fsp-dg~~l~s~s~Dg~I~vWd~~t~-------~~i~~~~ 323 (531)
..+.+..++.|.+|+.... +.+..+.+|.+.|++++|+| ++++|++|+.||+|+|||+.++ +.+..+.
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~ 128 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE 128 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec
Confidence 3456778899999987543 34567889999999999999 8999999999999999999987 4556664
Q ss_pred CC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEE--cccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcC
Q 009597 324 TG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY--DQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400 (531)
Q Consensus 324 ~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~--~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~ 400 (531)
.+ ..+..+.|++. ..++|++|+.||.|++||+++++.+..+ ..|...|.+++|+|++++|++++.|+.|++||++
T Consensus 129 ~h~~~v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 129 GHTKRVGIVAWHPT--AQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp CCSSCEEEEEECSS--BTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred CCCCeEEEEEECcC--CCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 33 33455666554 3368999999999999999999999999 8899999999999999999999999999999999
Q ss_pred CCeEEEEeeCCCCCC-ccEEEEeCCCCEEEEE---EcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEE
Q 009597 401 IPVVIKYISEPHMHS-MPSISLHPNTNWLAAQ---SLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 476 (531)
Q Consensus 401 ~~~~~~~~~~~~~~~-v~~v~~sp~~~~l~s~---s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~ 476 (531)
++..+..+...|... +.++.|+|++.+|+++ +.|+.|++||+++.........+ .+ ...+.+++|+|++++|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~--~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 207 KGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL-DT--SSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp TTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC-CC--CSSCEEEEEETTTTEEE
T ss_pred CCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec-cC--CCceeEEEEcCCCCEEE
Confidence 999888874456655 8999999999999999 68999999999886542222222 22 34588899999999996
Q ss_pred -EEeCCCcEEEEECCCCeE-EEEeec--cCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 477 -SGDGEGKCWFWDWKSCKV-FRTLKC--HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 477 -sgs~dg~I~iwd~~~~~~-~~~~~~--h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+|+.||.|++||+.+++. +..+.. |...|.+++|+| ++.++++ .++.+++|+
T Consensus 284 ~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp-~~~~~~s--~~~~~~~~~ 339 (402)
T 2aq5_A 284 LCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMP-KRGLEVN--KCEIARFYK 339 (402)
T ss_dssp EEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECC-GGGSCGG--GTEEEEEEE
T ss_pred EEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEec-cccccee--cceeEEEEE
Confidence 455799999999998873 444444 558999999999 6666654 577899995
No 66
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.4e-31 Score=265.72 Aligned_cols=245 Identities=17% Similarity=0.185 Sum_probs=207.3
Q ss_pred ecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc--EEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEE
Q 009597 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ--VIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 356 (531)
Q Consensus 280 l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~--~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd 356 (531)
+..|..+|++++|+|++++|++++.|+.|+|||+.+++ .+..+..+ ..+..+.+.++ +.+|++++.||.|++||
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD---SNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETT---TTEEEEEETTSCEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCC---CCEEEEEcCCCeEEEEE
Confidence 45599999999999999999999999999999999987 77777543 34456666663 46899999999999999
Q ss_pred CCCCceeEEE--cccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCe---EEEEeeCCCCCCccEEEEeCCCCEEEEE
Q 009597 357 MNTKEITQEY--DQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPV---VIKYISEPHMHSMPSISLHPNTNWLAAQ 431 (531)
Q Consensus 357 ~~t~~~~~~~--~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~---~~~~~~~~~~~~v~~v~~sp~~~~l~s~ 431 (531)
+.+++....+ ..|...|.+++|+|++++|++++.|+.|++||++... ....+..+|...|.+++|+|++++|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 9888755444 6789999999999999999999999999999998765 3445556688999999999999999999
Q ss_pred EcCCeEEEEEcCCcc---------------eeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 009597 432 SLDNQILIYSTRERF---------------QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFR 496 (531)
Q Consensus 432 s~Dg~I~iwd~~~~~---------------~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~ 496 (531)
+.|+.|++||++... .......+.+| ...+.+++|+|++.+|++++.||.|++||+++++++.
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS--CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC--SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCC--CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 999999999964210 01223344455 4569999999999999999999999999999999999
Q ss_pred EeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 497 TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 497 ~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+..|...|.+++|+| ++.+|+++ .||.|++||
T Consensus 239 ~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~ 271 (372)
T 1k8k_C 239 TLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFT 271 (372)
T ss_dssp EEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEE
T ss_pred EEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEE
Confidence 9999999999999999 66677766 899999996
No 67
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.9e-31 Score=269.76 Aligned_cols=252 Identities=14% Similarity=0.102 Sum_probs=200.3
Q ss_pred ccCeeeEEecCccCceEEEEEccCC-CEEEEEecCCeEEEEeCCCCcEEEEccC-CCcceEEEEccCCCCCcEEEEeeCC
Q 009597 272 FHGKCMRTYMGHSKAVRDISFCNDG-TKFLTASYDKNIKYWDTETGQVIRTFST-GKIPYVVKLNPDDDKQNILLAGMSD 349 (531)
Q Consensus 272 ~~~~~~~~l~gH~~~V~~l~fspdg-~~l~s~s~Dg~I~vWd~~t~~~i~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~d 349 (531)
...+..+.+.+|...|++++|+|++ ++|++|+.||.|+|||+.+++....+.. ++...+..+.+.+..+.+|++++.|
T Consensus 61 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 61 KSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp TTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred cccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 3467788999999999999999998 8999999999999999999888877753 3433444444433334789999999
Q ss_pred CeEEEEECCCCceeEEEccc---CCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCC
Q 009597 350 KKIVQWDMNTKEITQEYDQH---LGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN 426 (531)
Q Consensus 350 g~I~iwd~~t~~~~~~~~~h---~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 426 (531)
+.|++||+++ ..+..+..| ...|.+++|+|++++|++++.|+.|++||++ +..+..+. .|...|.+++|+|++.
T Consensus 141 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~-~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 141 GATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEK-LHKAKVTHAEFNPRCD 217 (383)
T ss_dssp TEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEE-CSSSCEEEEEECSSCT
T ss_pred CEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEec-cCCCcEEEEEECCCCC
Confidence 9999999986 555555444 4789999999999999999999999999995 55555554 4889999999999998
Q ss_pred -EEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEeeccC--
Q 009597 427 -WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE-- 502 (531)
Q Consensus 427 -~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~-- 502 (531)
+|++++.|+.|++||+++...........+| ...+.+++|+| ++.+|++++.|+.|++||+++++.+..+..|.
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 295 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEMPH--EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHR 295 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC--SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBC
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEecC--CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccc
Confidence 9999999999999999873321111112234 46699999999 99999999999999999999888777666553
Q ss_pred ---------------CcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 503 ---------------GVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 503 ---------------~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+.+..++|+| ++.+ +++.||.|++||
T Consensus 296 ~~~~~~~~~~~~~p~~~~~~~~~s~-dg~~--s~s~d~~i~iwd 336 (383)
T 3ei3_B 296 QFQHLTPIKATWHPMYDLIVAGRYP-DDQL--LLNDKRTIDIYD 336 (383)
T ss_dssp CCTTSCCCCCEECSSSSEEEEECBC-CTTT--CTTCCCCEEEEE
T ss_pred ccccccceEEeccCCCCceEEEecC-Cccc--ccCCCCeEEEEe
Confidence 2344456666 3333 677899999997
No 68
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.6e-31 Score=275.44 Aligned_cols=258 Identities=22% Similarity=0.429 Sum_probs=224.8
Q ss_pred hhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEE
Q 009597 253 EEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332 (531)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~ 332 (531)
++..+++++.++.|.+|+..+++++..+.+|...|.+++| ++++|++|+.||+|++||+.+++++..+..+ ...+..
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~ 218 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHH-CEAVLH 218 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCC-CSCEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC-CCcEEE
Confidence 4566778889999999999999999999999999999999 7889999999999999999999999888643 344455
Q ss_pred EccCCCCCcEEEEeeCCCeEEEEECCCCcee---EEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEee
Q 009597 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEIT---QEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYIS 409 (531)
Q Consensus 333 ~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~---~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~ 409 (531)
+.+. +.++++|+.||.|++||+.++..+ ..+.+|...|.++.| ++++|++++.||.|++||++++..+..+.
T Consensus 219 l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 293 (435)
T 1p22_A 219 LRFN---NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN 293 (435)
T ss_dssp EECC---TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEc---CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEc
Confidence 5553 258999999999999999988765 678899999999999 68899999999999999999998888776
Q ss_pred CCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 009597 410 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 489 (531)
Q Consensus 410 ~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~ 489 (531)
.|...|.++.++ +.+|++|+.||.|++||++++..+ ..+.+|. ..+.+++| ++.+|++|+.||.|++||+
T Consensus 294 -~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~---~~~~~h~--~~v~~~~~--~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 294 -GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL---RVLEGHE--ELVRCIRF--DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp -CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEE---EEECCCS--SCEEEEEC--CSSEEEEEETTSCEEEEEH
T ss_pred -CCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEE---EEEeCCc--CcEEEEEe--cCCEEEEEeCCCcEEEEEC
Confidence 488899999884 789999999999999999987554 4556664 55888888 7899999999999999999
Q ss_pred CCCe---------EEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 490 KSCK---------VFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 490 ~~~~---------~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.++. ++..+.+|.+.|.+++| ++.+|++++.||.|++||
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~---~~~~l~s~s~Dg~i~iwd 411 (435)
T 1p22_A 364 VAALDPRAPAGTLCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWD 411 (435)
T ss_dssp HHHTSTTSCTTTTEEEEECCCSSCCCCEEE---CSSCEEECCSSSEEEEEC
T ss_pred CCCCCccccccchheeeccCCCCCeEEEEe---CCCEEEEEeCCCEEEEEE
Confidence 7766 88899999999999999 456799999999999997
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.9e-31 Score=294.36 Aligned_cols=249 Identities=19% Similarity=0.343 Sum_probs=219.7
Q ss_pred eeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEE
Q 009597 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIV 353 (531)
Q Consensus 275 ~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~ 353 (531)
+..+.+.+|.+.|++++|+|++++|++++.||.|+|||+.+++.+..+..+ ..+.++.|+++. .+|++|+.||.|+
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARK---NWIIVGSDDFRIR 80 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG---TEEEEEETTSEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCC---CEEEEEeCCCeEE
Confidence 457889999999999999999999999999999999999999999988743 345667777643 6899999999999
Q ss_pred EEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeC-CCCEEEEEE
Q 009597 354 QWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQS 432 (531)
Q Consensus 354 iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp-~~~~l~s~s 432 (531)
+||+.+++.+..+..|.+.|.+++|+|++++|++++.||.|++||+.++.........|...|.+++|+| ++..|++++
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 9999999999999999999999999999999999999999999999987444444445889999999999 899999999
Q ss_pred cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcC--CCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEE
Q 009597 433 LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP--DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510 (531)
Q Consensus 433 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp--dg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~ 510 (531)
.||.|++||+........ +..+. ...+.+++|+| ++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|
T Consensus 161 ~dg~v~vwd~~~~~~~~~---~~~~~-~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 236 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFT---LTTGQ-ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236 (814)
T ss_dssp TTSEEEEEETTCSSCSEE---EECCC-TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred CCCeEEEEECCCCcceeE---EecCC-CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 999999999987654322 22222 24477799999 9999999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEeCCCCEEeeC
Q 009597 511 HPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 511 ~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+| ++.+|++++.||.|++||
T Consensus 237 ~~-~~~~l~~~~~dg~v~vwd 256 (814)
T 3mkq_A 237 HP-TLPIIISGSEDGTLKIWN 256 (814)
T ss_dssp CS-SSSEEEEEETTSCEEEEE
T ss_pred cC-CCCEEEEEeCCCeEEEEE
Confidence 99 778999999999999997
No 70
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.6e-30 Score=287.72 Aligned_cols=246 Identities=24% Similarity=0.383 Sum_probs=205.8
Q ss_pred eeeEEecCccCceEEEEEccC-CCEEEEEecCCeEEEEeCCCC-----cEEEEccCC-CcceEEEEccCCCCCcEEEEee
Q 009597 275 KCMRTYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDTETG-----QVIRTFSTG-KIPYVVKLNPDDDKQNILLAGM 347 (531)
Q Consensus 275 ~~~~~l~gH~~~V~~l~fspd-g~~l~s~s~Dg~I~vWd~~t~-----~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~ 347 (531)
+....+.+|.+.|++|+|+|+ +++|+||+.|++|+||++.+. .....+..+ ..+.++.++++ +.+|++|+
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~---g~~l~sgs 449 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD---GQFALSGS 449 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT---SSEEEEEE
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC---CCEEEEEe
Confidence 456678999999999999986 478999999999999999763 334445333 33455556553 46899999
Q ss_pred CCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEee--CCCCCCccEEEEeCCC
Q 009597 348 SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYIS--EPHMHSMPSISLHPNT 425 (531)
Q Consensus 348 ~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~--~~~~~~v~~v~~sp~~ 425 (531)
.||.|++||+.++..+..+.+|...|.+++|+|++++|++++.|++|+|||+.......... ..|...|.+++|+|++
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999987665443332 3577889999999986
Q ss_pred --CEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCC
Q 009597 426 --NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503 (531)
Q Consensus 426 --~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~ 503 (531)
..|++++.|++|++||+++.... ..+.+|. +.|.+++|+|++++|++|+.||.|+|||+++++++..+.. ..
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~~~---~~~~~h~--~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~ 603 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCKLR---STLAGHT--GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NS 603 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCCEE---EEECCCS--SCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SS
T ss_pred CcceEEEEeCCCeEEEEECCCCcEE---EEEcCCC--CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CC
Confidence 68999999999999999886443 4566774 5699999999999999999999999999999999988874 45
Q ss_pred cEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 504 VCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 504 ~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.|.+++|+| ++.+|++++ |+.|+|||
T Consensus 604 ~v~~~~~sp-~~~~l~~~~-~~~i~iwd 629 (694)
T 3dm0_A 604 VIHALCFSP-NRYWLCAAT-EHGIKIWD 629 (694)
T ss_dssp CEEEEEECS-SSSEEEEEE-TTEEEEEE
T ss_pred cEEEEEEcC-CCcEEEEEc-CCCEEEEE
Confidence 799999999 666666655 66799997
No 71
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.2e-31 Score=273.69 Aligned_cols=275 Identities=11% Similarity=0.063 Sum_probs=208.2
Q ss_pred HHHhhhhccCCCCCC-------CceeeeeecccCe----------eeEEecCccCceEEEEEccCCCEEEEE--------
Q 009597 248 YAKKKEEKGNAGGEK-------GEHVEDKSTFHGK----------CMRTYMGHSKAVRDISFCNDGTKFLTA-------- 302 (531)
Q Consensus 248 ~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~----------~~~~l~gH~~~V~~l~fspdg~~l~s~-------- 302 (531)
+++.++++++++|+. +..|++|...... ....|.+|...|.+++++ +..+++|
T Consensus 20 v~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l 97 (365)
T 4h5i_A 20 AKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNENSTKI 97 (365)
T ss_dssp EEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCCHHHH
T ss_pred EEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCCccEE
Confidence 345566777765543 2358888754332 234678999999998875 4456655
Q ss_pred ---ecCCeEEEEeCCCCcEE----EEccC------CCcceEEEEccCCCCCcE-EEEeeCCCeEEEEECCCCceeEEEcc
Q 009597 303 ---SYDKNIKYWDTETGQVI----RTFST------GKIPYVVKLNPDDDKQNI-LLAGMSDKKIVQWDMNTKEITQEYDQ 368 (531)
Q Consensus 303 ---s~Dg~I~vWd~~t~~~i----~~~~~------~~~~~~~~~~~~~~~~~~-l~sg~~dg~I~iwd~~t~~~~~~~~~ 368 (531)
+.|+.|++|++.+.... ..... .....+++|+|++. .+ +++++.|++|+|||+.+++++..+.
T Consensus 98 ~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~--~la~as~~~d~~i~iwd~~~~~~~~~~~- 174 (365)
T 4h5i_A 98 TQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGT--VAAIASSKVPAIMRIIDPSDLTEKFEIE- 174 (365)
T ss_dssp HHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSS--CEEEEESCSSCEEEEEETTTTEEEEEEE-
T ss_pred EEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCC--EEEEEECCCCCEEEEeECCCCcEEEEeC-
Confidence 45778999998654321 11111 11235677776543 23 2355679999999999999998886
Q ss_pred cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEE-EeeCCCCCCccEEEEeCCCCEEEEEEcCC----eEEEEEcC
Q 009597 369 HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIK-YISEPHMHSMPSISLHPNTNWLAAQSLDN----QILIYSTR 443 (531)
Q Consensus 369 h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~-~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg----~I~iwd~~ 443 (531)
|...|.+|+|+|++++|++++.++ +++|+..++..+. .....|...|.+++|+|++.++++++.|+ .+++|++.
T Consensus 175 ~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~ 253 (365)
T 4h5i_A 175 TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIK 253 (365)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEE
T ss_pred CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccc
Confidence 778899999999999999998655 6667766665543 44456788899999999999999999987 68889887
Q ss_pred Ccce-eceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe-eccCCcEEEEEEecCCCCEEEEE
Q 009597 444 ERFQ-LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL-KCHEGVCIGCEWHPLEQSKVATC 521 (531)
Q Consensus 444 ~~~~-~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~-~~h~~~V~~v~~~p~~~~~l~t~ 521 (531)
.... ......+.+|. ..|++++|+|+|++|++|+.|+.|+|||+.+++++..+ .+|...|++++|+| ++.+|+||
T Consensus 254 ~~~~~~~~~~~~~~~~--~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp-dg~~laS~ 330 (365)
T 4h5i_A 254 SGNTSVLRSKQVTNRF--KGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISP-DSTYVASV 330 (365)
T ss_dssp TTEEEEEEEEEEESSC--SCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECT-TSCEEEEE
T ss_pred cceecceeeeeecCCC--CCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECC-CCCEEEEE
Confidence 6532 22234455664 55999999999999999999999999999999999886 68999999999999 88999999
Q ss_pred eCCCCEEeeC
Q 009597 522 GWDGLIKYWD 531 (531)
Q Consensus 522 s~Dg~I~iWD 531 (531)
|.|++|+|||
T Consensus 331 S~D~tvrvw~ 340 (365)
T 4h5i_A 331 SAANTIHIIK 340 (365)
T ss_dssp ETTSEEEEEE
T ss_pred eCCCeEEEEE
Confidence 9999999996
No 72
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.9e-32 Score=277.94 Aligned_cols=245 Identities=19% Similarity=0.200 Sum_probs=195.5
Q ss_pred EecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCC--cEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEE
Q 009597 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG--QVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQW 355 (531)
Q Consensus 279 ~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~--~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iw 355 (531)
.+..|.++|++++|+|++++|++|+.|+.|+|||+.++ +++..+..+ ..+..+.|+++ +.+|++|+.|+.|++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~---~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPK---SNRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTT---TCCEEEEETTSSEEEC
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCC---CCEEEEEeCCCeEEEE
Confidence 34457789999999999999999999999999999988 666666533 23455666654 3679999999999999
Q ss_pred ECCCCc---eeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeE---EEEeeCCCCCCccEEEEeCCCCEEE
Q 009597 356 DMNTKE---ITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVV---IKYISEPHMHSMPSISLHPNTNWLA 429 (531)
Q Consensus 356 d~~t~~---~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~---~~~~~~~~~~~v~~v~~sp~~~~l~ 429 (531)
|+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||++.+.. ...+..+|...|.+++|+|++++|+
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 999877 6777888999999999999999999999999999999998763 5556555899999999999999999
Q ss_pred EEEcCCeEEEEEcCCcc---------------eeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE
Q 009597 430 AQSLDNQILIYSTRERF---------------QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV 494 (531)
Q Consensus 430 s~s~Dg~I~iwd~~~~~---------------~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~ 494 (531)
+++.|+.|++||+.... .......+ +| ...+.+++|+|++++|++++.||.|++||+.+++.
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PS--GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CC--SSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cC--CceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 99999999999986321 01122333 45 46699999999999999999999999999999877
Q ss_pred ----EEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 495 ----FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 495 ----~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+..+.+|...|.+++|+| ++.+|++++.|+.+ +|+
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~-~~~ 278 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPI-LLQ 278 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEE-TTEEEEEESSSSEE-EEC
T ss_pred cceeeEeecCCCCceEEEEEcC-CCCEEEEEcCCcEE-EEE
Confidence 788899999999999999 77888888766655 553
No 73
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.98 E-value=8.4e-31 Score=264.60 Aligned_cols=249 Identities=15% Similarity=0.217 Sum_probs=210.4
Q ss_pred EEecCccCceEEEEEccC----CCEEEEEecCCeEEEEeCCCCcEEEEcc------CCCcceEEEEccCCCC-CcEEEEe
Q 009597 278 RTYMGHSKAVRDISFCND----GTKFLTASYDKNIKYWDTETGQVIRTFS------TGKIPYVVKLNPDDDK-QNILLAG 346 (531)
Q Consensus 278 ~~l~gH~~~V~~l~fspd----g~~l~s~s~Dg~I~vWd~~t~~~i~~~~------~~~~~~~~~~~~~~~~-~~~l~sg 346 (531)
....+|..+|++++|+|+ ...+++++.++.|+|||+.+++.+..+. .......+.|++.... +.+|++|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 344589999999999984 4456666667899999999888776664 2244667777776432 5789999
Q ss_pred eCCCeEEEEECCCCceeEEEcccCCCeeEEEEec-CCCEEEEEeCCCCEEEEEcCCCeEEEEee--CCCCCCccEEEEeC
Q 009597 347 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVD-SNRRFVTSSDDKSLRVWEFGIPVVIKYIS--EPHMHSMPSISLHP 423 (531)
Q Consensus 347 ~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~--~~~~~~v~~v~~sp 423 (531)
+.||.|++||+.+++.+..+..|...|.+++|+| ++++|++++.||.|++||++++..+..+. ..|...|.+++|+|
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 9999999999999999999999999999999999 99999999999999999999998887763 45889999999999
Q ss_pred CCCEEEEEEcCCeEEEEEcCCcceeceee-------------------------eecCCccccceEEEEEcCCCCEEEEE
Q 009597 424 NTNWLAAQSLDNQILIYSTRERFQLNKKK-------------------------RFAGHIVAGYACQVNFSPDGRFVMSG 478 (531)
Q Consensus 424 ~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~-------------------------~~~~~~~~~~v~~l~~spdg~~l~sg 478 (531)
++.+|++++.||.|++||++++..+.... ...+| ...|.+++|+ +.+|+++
T Consensus 172 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~--~~~l~~~ 247 (366)
T 3k26_A 172 LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH--RNYVDCVRWL--GDLILSK 247 (366)
T ss_dssp TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC--SSCCCEEEEE--TTEEEEE
T ss_pred CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC--cceEEEEEEc--CCEEEEE
Confidence 99999999999999999998765432211 11123 4568889998 7799999
Q ss_pred eCCCcEEEEECCCCe--------------EEEEeeccCCcEEEEEEecCC--CCEEEEEeCCCCEEeeC
Q 009597 479 DGEGKCWFWDWKSCK--------------VFRTLKCHEGVCIGCEWHPLE--QSKVATCGWDGLIKYWD 531 (531)
Q Consensus 479 s~dg~I~iwd~~~~~--------------~~~~~~~h~~~V~~v~~~p~~--~~~l~t~s~Dg~I~iWD 531 (531)
+.||.|++||+.++. .+..+..|...|.+++|+| + +.+|++++.||.|++||
T Consensus 248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~~l~~~~~dg~i~vwd 315 (366)
T 3k26_A 248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM-DFWQKMLALGNQVGKLYVWD 315 (366)
T ss_dssp CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEE-CTTSSEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcC-CCCCcEEEEEecCCcEEEEE
Confidence 999999999998763 4888889999999999999 6 88999999999999997
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=2.6e-30 Score=303.65 Aligned_cols=278 Identities=19% Similarity=0.282 Sum_probs=244.0
Q ss_pred HHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC
Q 009597 247 EYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326 (531)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~ 326 (531)
+++.+++++.+++++.++.|.+|+..+++++.++.+|...|.+++|+|++++|++|+.||+|+|||+.+++++..+..+.
T Consensus 620 ~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~ 699 (1249)
T 3sfz_A 620 HACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHS 699 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCC
Confidence 34556677777888899999999999999999999999999999999999999999999999999999999999886543
Q ss_pred -cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEE
Q 009597 327 -IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVI 405 (531)
Q Consensus 327 -~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~ 405 (531)
...++.|.+.. ...++++|+.|+.|++||+.+++++..+.+|.+.|.+++|+|++++|++++.||.|++||+.++...
T Consensus 700 ~~v~~~~~~~~~-~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~ 778 (1249)
T 3sfz_A 700 EQVNCCHFTNKS-NHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANER 778 (1249)
T ss_dssp SCEEEEEECSSS-SCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEE
T ss_pred CcEEEEEEecCC-CceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCccc
Confidence 34556666543 3468999999999999999999999999999999999999999999999999999999999998776
Q ss_pred EEeeCC------------CCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCC
Q 009597 406 KYISEP------------HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 473 (531)
Q Consensus 406 ~~~~~~------------~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~ 473 (531)
..+... ....+.+++|+|++..+++++ ++.|.+||+.++..+... ..+| ...+.+++|+|++.
T Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~--~~~~--~~~v~~~~~sp~~~ 853 (1249)
T 3sfz_A 779 KSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEI--HTGH--HSTIQYCDFSPYDH 853 (1249)
T ss_dssp EEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEE--ECSS--SSCCCEEEECSSTT
T ss_pred ceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEE--cCCC--CCceEEEEEcCCCC
Confidence 665421 233688999999999999887 789999999987655332 2344 35588899999999
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 474 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 474 ~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++++++.+|.|++||+.++..+..+.+|.+.|.+++|+| ++.+|++++.||.|++||
T Consensus 854 ~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 854 LAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSP-DGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp EEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred EEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECC-CCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999999999999999999999 888999999999999996
No 75
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=6.5e-30 Score=267.29 Aligned_cols=258 Identities=22% Similarity=0.426 Sum_probs=225.1
Q ss_pred hhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEE
Q 009597 253 EEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332 (531)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~ 332 (531)
++..+++++.++.+.+|+..+++++.++.+|...|.+++|+ +++|++|+.||+|++||+.+++++..+..+. ..+.+
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~ 204 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHT-STVRC 204 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEE
T ss_pred cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCC-CcEEE
Confidence 45667788899999999999999999999999999999997 5689999999999999999999998886433 33444
Q ss_pred EccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCC
Q 009597 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH 412 (531)
Q Consensus 333 ~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~ 412 (531)
+.+. +..+++|+.||.|++||+.+++.+..+..|...|.++.| ++++|++++.||.|++||++++..+..+. .|
T Consensus 205 ~~~~---~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~ 278 (445)
T 2ovr_B 205 MHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ-GH 278 (445)
T ss_dssp EEEE---TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEEC-CC
T ss_pred EEec---CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEec-CC
Confidence 4443 257999999999999999999999999999999999999 78899999999999999999998887775 48
Q ss_pred CCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 009597 413 MHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSC 492 (531)
Q Consensus 413 ~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~ 492 (531)
...|.+++| ++.+|++++.|+.|++||++++..+ ..+.+|. ..+.++.+ ++.+|++|+.||.|++||++++
T Consensus 279 ~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~--~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 279 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI---HTLTGHQ--SLTSGMEL--KDNILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp SSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEE---EEECCCC--SCEEEEEE--ETTEEEEEETTSCEEEEETTTC
T ss_pred CCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEE---EEEcCCc--ccEEEEEE--eCCEEEEEeCCCeEEEEECCCC
Confidence 889999998 7899999999999999999987654 4455563 44665655 5779999999999999999999
Q ss_pred eEEEEeec---cCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 493 KVFRTLKC---HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 493 ~~~~~~~~---h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+++..+.. |...|.+++|++ .+|++|+.||.|++||
T Consensus 350 ~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iwd 388 (445)
T 2ovr_B 350 QCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWD 388 (445)
T ss_dssp CEEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEE
T ss_pred cEEEEEccCCCCCCCEEEEEECC---CEEEEEeCCCeEEEEE
Confidence 99999986 888999999964 7999999999999997
No 76
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.98 E-value=1.4e-30 Score=292.35 Aligned_cols=277 Identities=17% Similarity=0.252 Sum_probs=239.8
Q ss_pred HHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-
Q 009597 247 EYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG- 325 (531)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~- 325 (531)
++++.+++..++.+..++.|.+|+..+++.+..+.+|...|++++|+|++++|++++.||.|+|||+.+++.+..+..+
T Consensus 18 ~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 97 (814)
T 3mkq_A 18 GIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP 97 (814)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCC
Confidence 3456677778888888999999999999999999999999999999999999999999999999999999999888643
Q ss_pred CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC-ceeEEEcccCCCeeEEEEec-CCCEEEEEeCCCCEEEEEcCCCe
Q 009597 326 KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK-EITQEYDQHLGAVNTITFVD-SNRRFVTSSDDKSLRVWEFGIPV 403 (531)
Q Consensus 326 ~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~-~~~~~~~~h~~~I~~l~~sp-~~~~l~s~s~Dg~I~iwd~~~~~ 403 (531)
..+..+.|+++. .+|++|+.||.|++||+.++ .....+..|...|.+++|+| ++..|++++.||.|++||+..+.
T Consensus 98 ~~v~~~~~s~~~---~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 98 DYIRSIAVHPTK---PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp SCEEEEEECSSS---SEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred CCEEEEEEeCCC---CEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 344566666643 57999999999999999887 77788899999999999999 88999999999999999998887
Q ss_pred EEEEeeCCCCCCccEEEEeC--CCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC
Q 009597 404 VIKYISEPHMHSMPSISLHP--NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE 481 (531)
Q Consensus 404 ~~~~~~~~~~~~v~~v~~sp--~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d 481 (531)
....+...+...+.+++|+| ++.+|++++.||.|++||+.++..+ ..+.+|. ..+.+++|+|++.+|++++.|
T Consensus 175 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~---~~~~~~~--~~v~~~~~~~~~~~l~~~~~d 249 (814)
T 3mkq_A 175 PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV---ATLEGHM--SNVSFAVFHPTLPIIISGSED 249 (814)
T ss_dssp CSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEE---EEEECCS--SCEEEEEECSSSSEEEEEETT
T ss_pred ceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE---EEEcCCC--CCEEEEEEcCCCCEEEEEeCC
Confidence 77777666668999999999 9999999999999999999887544 4455563 558899999999999999999
Q ss_pred CcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 482 GKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 482 g~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|.|++||+.+++.+..+..|...+.+++|+|.+...+++++.|+.+.+|+
T Consensus 250 g~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (814)
T 3mkq_A 250 GTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (814)
T ss_dssp SCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEE
T ss_pred CeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEE
Confidence 99999999999999999999999999999995555434445566677663
No 77
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=2.8e-30 Score=260.63 Aligned_cols=280 Identities=16% Similarity=0.197 Sum_probs=231.1
Q ss_pred HHHHHhhh---hccCCCCCCCceeeeeeccc-Ceee-EEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEE
Q 009597 246 EEYAKKKE---EKGNAGGEKGEHVEDKSTFH-GKCM-RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIR 320 (531)
Q Consensus 246 ~~~~~~~~---~~~~~~~~~~~~i~~~~~~~-~~~~-~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~ 320 (531)
.++++.++ +..++++..++.+.+|+... ++.+ ..+.+|...|++++|+|++++|++++.||.|++||+.+++.+.
T Consensus 43 ~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 122 (368)
T 3mmy_A 43 GCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ 122 (368)
T ss_dssp EEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee
Confidence 34455666 47888889999999999886 5555 8899999999999999999999999999999999999999888
Q ss_pred EccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcC
Q 009597 321 TFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400 (531)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~ 400 (531)
..........+.+.+.+ .+.+|++++.||.|++||+++++.+..+..|. .+.++.+. ...+++++.++.+++|+++
T Consensus 123 ~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~ 198 (368)
T 3mmy_A 123 IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLE 198 (368)
T ss_dssp EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECS
T ss_pred eccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEec
Confidence 77766667777774443 34789999999999999999999999998764 56666665 4588999999999999998
Q ss_pred CCeE-EEEeeCCCCCCccEEEEeCCCCE----EEEEEcCCeEEEEEcCCcceeceeeeecCCccc----------cceEE
Q 009597 401 IPVV-IKYISEPHMHSMPSISLHPNTNW----LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA----------GYACQ 465 (531)
Q Consensus 401 ~~~~-~~~~~~~~~~~v~~v~~sp~~~~----l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~----------~~v~~ 465 (531)
.... ...+...+...+.++++.++... +++++.|+.|++|+++..........+.+|... ..+.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 278 (368)
T 3mmy_A 199 NQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNG 278 (368)
T ss_dssp SSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEE
T ss_pred cccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEE
Confidence 7643 34444456667778888776655 999999999999999876443344555666431 15899
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 466 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 466 l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
++|+|++++|++|+.||.|++||+.+++++..+..|...|.+++|+| ++.+|++++.|+..+.|
T Consensus 279 ~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 279 IAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNH-NGNIFAYASSYDWSKGH 342 (368)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECT-TSSCEEEEECCCSTTCG
T ss_pred EEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECC-CCCeEEEEecccccccc
Confidence 99999999999999999999999999999999999999999999999 88899999998865443
No 78
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.1e-31 Score=286.49 Aligned_cols=252 Identities=12% Similarity=0.074 Sum_probs=197.5
Q ss_pred CeeeEEecCccCceEEEEEccCC---------CEEEE-------------------EecCCeEEEEeCCCCcEE----EE
Q 009597 274 GKCMRTYMGHSKAVRDISFCNDG---------TKFLT-------------------ASYDKNIKYWDTETGQVI----RT 321 (531)
Q Consensus 274 ~~~~~~l~gH~~~V~~l~fspdg---------~~l~s-------------------~s~Dg~I~vWd~~t~~~i----~~ 321 (531)
+++..++. +.+.|.+|+|+|++ ++||+ ++.|++|+||++.++++. ..
T Consensus 124 ~r~~~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~ 202 (524)
T 2j04_B 124 KRRGFIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQT 202 (524)
T ss_dssp CSCEEEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEE
T ss_pred CcceEEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEE
Confidence 44445555 67888999998875 55655 557899999999887642 23
Q ss_pred ccC-CCcceEEEEccCC---CCCcEEEEeeCCCeEEEEECCCCce-----------eEEEcccCCCeeEEEEecCCCEEE
Q 009597 322 FST-GKIPYVVKLNPDD---DKQNILLAGMSDKKIVQWDMNTKEI-----------TQEYDQHLGAVNTITFVDSNRRFV 386 (531)
Q Consensus 322 ~~~-~~~~~~~~~~~~~---~~~~~l~sg~~dg~I~iwd~~t~~~-----------~~~~~~h~~~I~~l~~sp~~~~l~ 386 (531)
+.. ...+..+.|++.. ..+.+|++|+.||+|++||+.++.. ...+.+|...|++++|+++ ..|+
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~la 281 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVV 281 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEE
Confidence 333 2445667787752 1246899999999999999986642 3477889999999999986 4899
Q ss_pred EEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEE--EEeCCC-CEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccce
Q 009597 387 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI--SLHPNT-NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 463 (531)
Q Consensus 387 s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v--~~sp~~-~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v 463 (531)
+|+.||+|++||++++.........|...|.++ +|+|++ .+|++++.|++|+|||+++...+. .+.+|.....+
T Consensus 282 sgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~---~~~~~~~~~~v 358 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK---TTVSRFRGSNL 358 (524)
T ss_dssp EEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC---EEEEECSCCSC
T ss_pred EEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc---ccccccccCcc
Confidence 999999999999987633222234589999999 578887 899999999999999999865543 33344332346
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 464 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 464 ~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++|+|++..|++++.|++|++||++++.++..+.+|.+.|.+++|+| ++.+|++|+.||+|++||
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR-LHPMVLAGSADGSLIITN 425 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCS-SCCBCEEEETTTEEECCB
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCC-CCCeEEEEECCCEEEEEe
Confidence 7799999999999999999999999999998888999999999999999 778999999999999997
No 79
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=4.9e-31 Score=265.62 Aligned_cols=249 Identities=15% Similarity=0.209 Sum_probs=201.1
Q ss_pred eEEecCccCceEEEEEccCCCEEE-EEec---CCeEEEEeCCCCcEEEEcc--CCCcceEEEEccCCCCCcEEEEeeCCC
Q 009597 277 MRTYMGHSKAVRDISFCNDGTKFL-TASY---DKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMSDK 350 (531)
Q Consensus 277 ~~~l~gH~~~V~~l~fspdg~~l~-s~s~---Dg~I~vWd~~t~~~i~~~~--~~~~~~~~~~~~~~~~~~~l~sg~~dg 350 (531)
...+.+|...|.+++|+|++..|+ +++. |+.|+|||+.+++...... ....+.++.|.+....+.+|++|+.||
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 455688999999999999986555 5655 9999999999988765543 344556666666533357899999999
Q ss_pred eEEEEECCCCc-eeEEEcccCCCeeEEEE------ecCCCEEEEEeCCCCEEEEEcCCCe-EEEEeeC---CCCCCccEE
Q 009597 351 KIVQWDMNTKE-ITQEYDQHLGAVNTITF------VDSNRRFVTSSDDKSLRVWEFGIPV-VIKYISE---PHMHSMPSI 419 (531)
Q Consensus 351 ~I~iwd~~t~~-~~~~~~~h~~~I~~l~~------sp~~~~l~s~s~Dg~I~iwd~~~~~-~~~~~~~---~~~~~v~~v 419 (531)
.|++||+.+++ .+..+..|...|.++.| +|++++|++++.|+.|++||++.+. .+..+.. .+...+.++
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 99999999988 89999999999999965 6789999999999999999999876 4444432 113378888
Q ss_pred E----EeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcC---CCCEEEEEeCCCcEEEEECCCC
Q 009597 420 S----LHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP---DGRFVMSGDGEGKCWFWDWKSC 492 (531)
Q Consensus 420 ~----~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp---dg~~l~sgs~dg~I~iwd~~~~ 492 (531)
+ |+|++.+|++++.|+.|++||+++..... ...| ...+.+++|+| ++.+|++|+.||.|++||++++
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~~--~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW----ETNI--KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE----EEEC--SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCceee----ecCC--CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 8 78899999999999999999999875432 2233 35689999999 9999999999999999999887
Q ss_pred eEEEEee-----ccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 493 KVFRTLK-----CHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 493 ~~~~~~~-----~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+.+..+. +|...|.+++|+|++..+|++++.||.|++||
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 288 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWK 288 (357)
T ss_dssp ETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred CcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEee
Confidence 6654444 89999999999994333899999999999997
No 80
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.98 E-value=5.6e-31 Score=264.03 Aligned_cols=269 Identities=10% Similarity=0.049 Sum_probs=222.3
Q ss_pred HHHhhhhccCCCCCCCceeeeeecccCe---eeEEecCccCceEEEEEccCCC-EEEEEecCCeEEEEeC-CCCcEEEEc
Q 009597 248 YAKKKEEKGNAGGEKGEHVEDKSTFHGK---CMRTYMGHSKAVRDISFCNDGT-KFLTASYDKNIKYWDT-ETGQVIRTF 322 (531)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~l~gH~~~V~~l~fspdg~-~l~s~s~Dg~I~vWd~-~t~~~i~~~ 322 (531)
+++.+++..++.++.++.+++|+...++ ....+.+|...|.+++|+|+++ +|++|+.||.|++||+ .+++.....
T Consensus 17 ~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 96 (342)
T 1yfq_A 17 IKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT 96 (342)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECB
T ss_pred EEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEecc
Confidence 3455667777888889999999988776 4566679999999999999999 9999999999999999 888764333
Q ss_pred c--CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC---------CceeEEEcccCCCeeEEEEecCCCEEEEEeCC
Q 009597 323 S--TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT---------KEITQEYDQHLGAVNTITFVDSNRRFVTSSDD 391 (531)
Q Consensus 323 ~--~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t---------~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~D 391 (531)
. +...+..+.+.+ +.+|++++.|+.|++||+++ ++++..+. |...|.+++|+|++ |++++.|
T Consensus 97 ~~~~~~~v~~l~~~~----~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d 169 (342)
T 1yfq_A 97 NNEANLGICRICKYG----DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNN 169 (342)
T ss_dssp SCCCCSCEEEEEEET----TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEEST
T ss_pred ccCCCCceEEEEeCC----CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCC
Confidence 3 333445556655 46899999999999999987 77676666 88999999999887 9999999
Q ss_pred CCEEEEEcCC-CeE-EEEeeCCCCCCccEEEEeC-CCCEEEEEEcCCeEEEEEcCCc--c-eeceeeeecCCcc------
Q 009597 392 KSLRVWEFGI-PVV-IKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTRER--F-QLNKKKRFAGHIV------ 459 (531)
Q Consensus 392 g~I~iwd~~~-~~~-~~~~~~~~~~~v~~v~~sp-~~~~l~s~s~Dg~I~iwd~~~~--~-~~~~~~~~~~~~~------ 459 (531)
+.|++||++. +.. .......+...+.+++|+| ++++|++++.||.|++|++... . .......+..|..
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN 249 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCS
T ss_pred CeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccc
Confidence 9999999988 432 3334445788999999999 9999999999999999999775 0 0122234455532
Q ss_pred -ccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecc-CCcEEEEEEecCCCCEEEEEeCCCC
Q 009597 460 -AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH-EGVCIGCEWHPLEQSKVATCGWDGL 526 (531)
Q Consensus 460 -~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h-~~~V~~v~~~p~~~~~l~t~s~Dg~ 526 (531)
...+.+++|+|++++|++|+.||.|++||+.+++++..+..| ...|.+++ | ++.+|++++.||.
T Consensus 250 ~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~-~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 250 LAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--C-SDNILCLATSDDT 315 (342)
T ss_dssp SCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--E-CSSEEEEEEECTH
T ss_pred cceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--C-CCCeEEEEecCCc
Confidence 346999999999999999999999999999999999999998 99999999 7 7889999999997
No 81
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2e-29 Score=254.45 Aligned_cols=245 Identities=14% Similarity=0.266 Sum_probs=208.7
Q ss_pred eeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC-cceEEEEccCCCCCcEEEEeeCCCeEE
Q 009597 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLNPDDDKQNILLAGMSDKKIV 353 (531)
Q Consensus 275 ~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~-~~~~~~~~~~~~~~~~l~sg~~dg~I~ 353 (531)
.....+.+|...|++++|+|++++|++|+.||.|+|||+.+++.+..+..+. .+..+.+.+ .+.+|++++.||.|+
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC---FTKYCVTGSADYSIK 99 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT---TSSEEEEEETTTEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC---CCCEEEEEeCCCeEE
Confidence 3456789999999999999999999999999999999999999999886433 345556655 346899999999999
Q ss_pred EEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCC-----CCEEEEEcCCCeE-----------EEEeeCCCCC--C
Q 009597 354 QWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD-----KSLRVWEFGIPVV-----------IKYISEPHMH--S 415 (531)
Q Consensus 354 iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~D-----g~I~iwd~~~~~~-----------~~~~~~~~~~--~ 415 (531)
+||+.+++.+..+. |...|.+++|+|++++|++++.+ +.|++||+..... +..+. .+.. .
T Consensus 100 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 177 (369)
T 3zwl_B 100 LWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII-THEGLDA 177 (369)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE-CCTTCCC
T ss_pred EEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc-CCcCccc
Confidence 99999999999888 88999999999999999999999 9999999865421 11121 2333 8
Q ss_pred ccEEEEeCCCCEEEEEEcCCeEEEEEcCC-cceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE
Q 009597 416 MPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV 494 (531)
Q Consensus 416 v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~ 494 (531)
+.+++|+|++++|++++.||.|++||+++ ...+ ..+..| ...+.+++|+|++.+|++++.||.|++||+++++.
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYV---DSIDLH--EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEE---EEEECC--SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeE---EEEecC--CCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 99999999999999999999999999987 3333 445555 35589999999999999999999999999999999
Q ss_pred EEEeeccCCcEEEEEEecCCCCEEEEEeCCC--------------CEEeeC
Q 009597 495 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDG--------------LIKYWD 531 (531)
Q Consensus 495 ~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg--------------~I~iWD 531 (531)
+..+. +...+.+++|+| ++.++++++.++ .|++||
T Consensus 253 ~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d 301 (369)
T 3zwl_B 253 LKKYE-TDCPLNTAVITP-LKEFIILGGGQEAKDVTTTSANEGKFEARFYH 301 (369)
T ss_dssp EEEEE-CSSCEEEEEECS-SSSEEEEEECCC-------------CEEEEEE
T ss_pred eeeec-CCCCceeEEecC-CCceEEEeecCCCceEEEEecCCCcceeEEEe
Confidence 99888 778899999999 788999999888 788886
No 82
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=9.9e-31 Score=272.43 Aligned_cols=246 Identities=20% Similarity=0.359 Sum_probs=198.3
Q ss_pred CccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc-----------EEEEccCC-------------CcceEEEEccCC
Q 009597 282 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ-----------VIRTFSTG-------------KIPYVVKLNPDD 337 (531)
Q Consensus 282 gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~-----------~i~~~~~~-------------~~~~~~~~~~~~ 337 (531)
.|.+.|++|+|+|+|++|++|+.||.|+|||+.+++ ++..+..+ ..+..+.|.+..
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 378999999999999999999999999999998877 46666544 335667777653
Q ss_pred CCCcEEEEeeCCCeEEEEECCCCcee---------------------------------------EE-EcccCCCeeEEE
Q 009597 338 DKQNILLAGMSDKKIVQWDMNTKEIT---------------------------------------QE-YDQHLGAVNTIT 377 (531)
Q Consensus 338 ~~~~~l~sg~~dg~I~iwd~~t~~~~---------------------------------------~~-~~~h~~~I~~l~ 377 (531)
. ..+|++++.|+.|++||+.++... .. ..+|...|.+++
T Consensus 106 ~-~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 106 N-AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp S-SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred C-cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 2 157999999999999998764432 12 367999999999
Q ss_pred EecCCCEEEEEeCCCCEEEEEcCCC-eEEEEe------eCCCCCCccEEEEeCCC-CEEEEEEcCCeEEEEEcCCccee-
Q 009597 378 FVDSNRRFVTSSDDKSLRVWEFGIP-VVIKYI------SEPHMHSMPSISLHPNT-NWLAAQSLDNQILIYSTRERFQL- 448 (531)
Q Consensus 378 ~sp~~~~l~s~s~Dg~I~iwd~~~~-~~~~~~------~~~~~~~v~~v~~sp~~-~~l~s~s~Dg~I~iwd~~~~~~~- 448 (531)
|+|++++|+++ .|+.|++||++.. ..+..+ ...|...|.+++|+|++ .+|++++.||.|++||++++...
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 99999999998 7999999999954 343332 33588899999999998 99999999999999999987531
Q ss_pred ceeeeecCCcc----------ccceEEEEEcCCCCEEEEEeCCCcEEEEECCC-CeEEEEeeccCCc-------------
Q 009597 449 NKKKRFAGHIV----------AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS-CKVFRTLKCHEGV------------- 504 (531)
Q Consensus 449 ~~~~~~~~~~~----------~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~-~~~~~~~~~h~~~------------- 504 (531)
.....+.+|.. ...+.+++|+|+|++|++++. +.|+|||+++ ++++..+.+|...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 11344555532 126999999999999999999 9999999997 8889999888642
Q ss_pred --EEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 505 --CIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 505 --V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+..++|+| ++.+|++|+.||.|++||
T Consensus 343 ~~~~~~~~s~-~~~~l~s~s~dg~v~iwd 370 (447)
T 3dw8_B 343 FDKFECCWNG-SDSVVMTGSYNNFFRMFD 370 (447)
T ss_dssp GCCCCEEECT-TSSEEEEECSTTEEEEEE
T ss_pred ccceEEEECC-CCCEEEEeccCCEEEEEE
Confidence 23499999 788999999999999997
No 83
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=5e-30 Score=277.80 Aligned_cols=274 Identities=15% Similarity=0.260 Sum_probs=222.2
Q ss_pred HHHHhhh-hccCCCCCCCceeeeeecccCeeeEEe-c---CccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEE
Q 009597 247 EYAKKKE-EKGNAGGEKGEHVEDKSTFHGKCMRTY-M---GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRT 321 (531)
Q Consensus 247 ~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~l-~---gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~ 321 (531)
++...++ +..++.+..++.+.+|+...++++..+ . +|...|.+++|+ ++.+|++++.|+.|++||+.+++.+..
T Consensus 211 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 211 DVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp EEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 3445666 777888888999999999999999999 6 899999999999 999999999999999999999999988
Q ss_pred ccCCC---cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecC-----------------
Q 009597 322 FSTGK---IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS----------------- 381 (531)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~----------------- 381 (531)
+.... ......+.+. .+.++++++.+|.|++||+.+++.+..+..|...|.+++| |+
T Consensus 290 ~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~ 366 (615)
T 1pgu_A 290 WTLDKQQLGNQQVGVVAT--GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSS 366 (615)
T ss_dssp EECCTTCGGGCEEEEEEE--ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTE
T ss_pred EcCCCCcccCceeEEEeC--CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchh
Confidence 87652 1222222222 3468999999999999999988888888777666666655 33
Q ss_pred --------------------------------------------------------------------------------
Q 009597 382 -------------------------------------------------------------------------------- 381 (531)
Q Consensus 382 -------------------------------------------------------------------------------- 381 (531)
T Consensus 367 ~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (615)
T 1pgu_A 367 MHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN 446 (615)
T ss_dssp EECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred hcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccC
Confidence
Q ss_pred ---------CCEEEEEeC-CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceecee
Q 009597 382 ---------NRRFVTSSD-DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 451 (531)
Q Consensus 382 ---------~~~l~s~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~ 451 (531)
+++|++++. |+.|++||+..+.........|...|.+++|+|++++|++++.||.|++||+.++..+
T Consensus 447 ~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~--- 523 (615)
T 1pgu_A 447 SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK--- 523 (615)
T ss_dssp SCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE---
T ss_pred CCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce---
Confidence 334444444 5555555555543332333457889999999999999999999999999999987654
Q ss_pred eeecC-CccccceEEEEEcC----------CCCEEEEEeCCCcEEEEECCCC-eEEEEeeccCCcEEEEEEecCCCCEEE
Q 009597 452 KRFAG-HIVAGYACQVNFSP----------DGRFVMSGDGEGKCWFWDWKSC-KVFRTLKCHEGVCIGCEWHPLEQSKVA 519 (531)
Q Consensus 452 ~~~~~-~~~~~~v~~l~~sp----------dg~~l~sgs~dg~I~iwd~~~~-~~~~~~~~h~~~V~~v~~~p~~~~~l~ 519 (531)
..+.+ | ...+.+++|+| ++++|++|+.||.|++||+.++ +++..+.+|...|.+++|+| ++. |+
T Consensus 524 ~~~~~~h--~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~-l~ 599 (615)
T 1pgu_A 524 TSRWAFR--TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET-PST-LV 599 (615)
T ss_dssp ECCSCCC--SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEE-TTE-EE
T ss_pred eEeecCC--CCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcC-CCC-eE
Confidence 33444 5 45699999999 9999999999999999999998 88899999999999999999 666 99
Q ss_pred EEeCCCCEEeeC
Q 009597 520 TCGWDGLIKYWD 531 (531)
Q Consensus 520 t~s~Dg~I~iWD 531 (531)
+++.||.|++||
T Consensus 600 s~~~d~~v~iw~ 611 (615)
T 1pgu_A 600 SSGADACIKRWN 611 (615)
T ss_dssp EEETTSCEEEEE
T ss_pred EecCCceEEEEe
Confidence 999999999996
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-30 Score=272.25 Aligned_cols=253 Identities=12% Similarity=0.152 Sum_probs=205.1
Q ss_pred eecccCeeeEEe-cCccCceEEEEEcc-CCCEEEEEecCCeEEEEeCCC---Cc---EEEEccCCCcceEEEEccCCCCC
Q 009597 269 KSTFHGKCMRTY-MGHSKAVRDISFCN-DGTKFLTASYDKNIKYWDTET---GQ---VIRTFSTGKIPYVVKLNPDDDKQ 340 (531)
Q Consensus 269 ~~~~~~~~~~~l-~gH~~~V~~l~fsp-dg~~l~s~s~Dg~I~vWd~~t---~~---~i~~~~~~~~~~~~~~~~~~~~~ 340 (531)
|. ..++++.++ .+|.+.|++|+|+| ++++|++|+.||+|+|||+.+ +. ....+.+...+.++.+.+ .+
T Consensus 48 w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~ 123 (437)
T 3gre_A 48 GN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIP---NF 123 (437)
T ss_dssp GG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECT---TS
T ss_pred cc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeC---CC
Confidence 55 568899999 99999999999999 999999999999999999876 33 344444455566666665 34
Q ss_pred cEEEEeeCCCeEEEEECC---CCceeEEEcc------------cCCCeeEEE--EecCCCEEEEEeCCCCEEEEEcCCCe
Q 009597 341 NILLAGMSDKKIVQWDMN---TKEITQEYDQ------------HLGAVNTIT--FVDSNRRFVTSSDDKSLRVWEFGIPV 403 (531)
Q Consensus 341 ~~l~sg~~dg~I~iwd~~---t~~~~~~~~~------------h~~~I~~l~--~sp~~~~l~s~s~Dg~I~iwd~~~~~ 403 (531)
.+|++|+.||.|++||+. +++.+..+.. +...+.++. +++++.+|++++.|+.|++||++++.
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 203 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE 203 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe
Confidence 689999999999999994 5555443332 445667776 55789999999999999999999999
Q ss_pred EEEEeeCC-CCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEc----CCCCEEEEE
Q 009597 404 VIKYISEP-HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS----PDGRFVMSG 478 (531)
Q Consensus 404 ~~~~~~~~-~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~s----pdg~~l~sg 478 (531)
.+..+... |...|.+++|+|++.+|++++.||.|++||++.+..+..+. + .|. ..|.+++|+ +++.+|++|
T Consensus 204 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-~~~--~~v~~~~~~~~~s~~~~~l~s~ 279 (437)
T 3gre_A 204 RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS-F-GDH--APITHVEVCQFYGKNSVIVVGG 279 (437)
T ss_dssp EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB-C-TTC--EEEEEEEECTTTCTTEEEEEEE
T ss_pred eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe-c-CCC--CceEEEEeccccCCCccEEEEE
Confidence 88887654 78899999999999999999999999999999875543221 1 332 458889555 568899999
Q ss_pred eCCCcEEEEECCCCeEEEEeecc--------------------------CCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 479 DGEGKCWFWDWKSCKVFRTLKCH--------------------------EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 479 s~dg~I~iwd~~~~~~~~~~~~h--------------------------~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+.||.|++||+++++++..+.+| ...|.+++|++ +.+|++|+.||.|++||
T Consensus 280 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~~wd 356 (437)
T 3gre_A 280 SSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSN--DKILLTDEATSSIVMFS 356 (437)
T ss_dssp STTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEET--TEEEEEEGGGTEEEEEE
T ss_pred cCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECC--ceEEEecCCCCeEEEEE
Confidence 99999999999999998888754 44578888883 47899999999999997
No 85
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.2e-29 Score=265.16 Aligned_cols=262 Identities=21% Similarity=0.343 Sum_probs=225.2
Q ss_pred hccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEE
Q 009597 254 EKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL 333 (531)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~ 333 (531)
+..+++++.++.+.+|+..+++++.++.+|...|.+++|+ ++.|++|+.||.|++||+.+++++..+..+. ..+.++
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~-~~v~~~ 245 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHV-AAVRCV 245 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCS-SCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCc-ccEEEE
Confidence 3467788889999999999999999999999999999995 5679999999999999999999998886433 333334
Q ss_pred ccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCC
Q 009597 334 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHM 413 (531)
Q Consensus 334 ~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~ 413 (531)
.+ .+.++++|+.||.|++||+++++.+..+..|...|.++.| ++.++++++.|+.|++||++++..+..+. .|.
T Consensus 246 ~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~ 319 (445)
T 2ovr_B 246 QY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQ 319 (445)
T ss_dssp EE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEEC-CCC
T ss_pred EE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEc-CCc
Confidence 44 2367999999999999999999999999999999999999 78999999999999999999998887765 477
Q ss_pred CCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCe
Q 009597 414 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK 493 (531)
Q Consensus 414 ~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~ 493 (531)
..+.++.+ ++++|++++.||.|++||++++..+..+.....| ...+.+++|+ +.+|++|+.||.|++||+.+++
T Consensus 320 ~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 320 SLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH--QSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSC--SSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC
T ss_pred ccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCC--CCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc
Confidence 77777776 4679999999999999999887665443332234 4568888885 6899999999999999999999
Q ss_pred EEEEe-----eccCCcEEEEEEecCCCCEEEEEeCCCC----EEeeC
Q 009597 494 VFRTL-----KCHEGVCIGCEWHPLEQSKVATCGWDGL----IKYWD 531 (531)
Q Consensus 494 ~~~~~-----~~h~~~V~~v~~~p~~~~~l~t~s~Dg~----I~iWD 531 (531)
.+..+ ..|.+.|.+++|+| ++.+|++|+.||+ |.+||
T Consensus 394 ~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 394 FIRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVLD 439 (445)
T ss_dssp EEEEEEECTTGGGTCEEEEEEECS-SEEEEEEECSSSSSCCEEEEEE
T ss_pred eeeeeeccccCCCCceEEEEEecC-CEEEEEEcccCCCCccEEEEEE
Confidence 99888 47888999999999 8889999999998 99997
No 86
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.8e-30 Score=260.33 Aligned_cols=243 Identities=12% Similarity=0.153 Sum_probs=203.7
Q ss_pred eeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc----EEEEccCCCcceEEEEccCCCCCc-EEEEeeCCC
Q 009597 276 CMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ----VIRTFSTGKIPYVVKLNPDDDKQN-ILLAGMSDK 350 (531)
Q Consensus 276 ~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~----~i~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg 350 (531)
.+....+|.+.|++++|+|++++|++++.|+.|+||++.++. ..........+.++.+.++ +. +|++|+.||
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~dg 79 (342)
T 1yfq_A 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN---TDLQIYVGTVQG 79 (342)
T ss_dssp EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES---SSEEEEEEETTS
T ss_pred ceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCC---CCcEEEEEcCCC
Confidence 344567899999999999999999999999999999998887 5555545555666777764 46 899999999
Q ss_pred eEEEEEC-CCCceeEEEcc--cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCC---------CeEEEEeeCCCCCCccE
Q 009597 351 KIVQWDM-NTKEITQEYDQ--HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI---------PVVIKYISEPHMHSMPS 418 (531)
Q Consensus 351 ~I~iwd~-~t~~~~~~~~~--h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~---------~~~~~~~~~~~~~~v~~ 418 (531)
.|++||+ .+++. ..+.. |...|.+++|+| +++|++++.|+.|++||+++ ...+..+. +...+.+
T Consensus 80 ~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~ 155 (342)
T 1yfq_A 80 EILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--VKNKIFT 155 (342)
T ss_dssp CEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS--SCCCEEE
T ss_pred eEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe--eCCceEE
Confidence 9999999 77754 77788 999999999999 99999999999999999886 44433332 7788999
Q ss_pred EEEeCCCCEEEEEEcCCeEEEEEcCC-cceeceeeeecCCccccceEEEEEcC-CCCEEEEEeCCCcEEEEECCCC----
Q 009597 419 ISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSC---- 492 (531)
Q Consensus 419 v~~sp~~~~l~s~s~Dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~sgs~dg~I~iwd~~~~---- 492 (531)
++|+|++ |++++.|+.|++||++. ...... .....+ ...+.+++|+| ++++|++++.||.|++|++...
T Consensus 156 ~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~--~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~ 230 (342)
T 1yfq_A 156 MDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGT-IEESGL--KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY 230 (342)
T ss_dssp EEECSSE--EEEEESTTEEEEEESSCCTTCCCE-EEECSC--SSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCST
T ss_pred EEecCCc--EEEEeCCCeEEEEECCccccccce-eeecCC--CCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccc
Confidence 9999887 99999999999999987 433211 122233 34588999999 9999999999999999999887
Q ss_pred --eEEEEeeccCC---------cEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 493 --KVFRTLKCHEG---------VCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 493 --~~~~~~~~h~~---------~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+....+..|.. .|.+++|+| ++.+|++++.||.|++||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp TCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEE
T ss_pred ccccceeeecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEc
Confidence 77888888865 999999999 778999999999999997
No 87
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=1.9e-29 Score=264.79 Aligned_cols=241 Identities=21% Similarity=0.349 Sum_probs=203.5
Q ss_pred eeeEEecCccCce-EEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC-cceEEEEccCCCCCcEEEEeeCCCeE
Q 009597 275 KCMRTYMGHSKAV-RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLNPDDDKQNILLAGMSDKKI 352 (531)
Q Consensus 275 ~~~~~l~gH~~~V-~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~-~~~~~~~~~~~~~~~~l~sg~~dg~I 352 (531)
.....+.+|...| .++.| ++++|++|+.||+|++||+.+++.+..+..+. .+.++.+.+ + .++++|+.||.|
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~--~--~~l~s~s~dg~i 185 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH--G--GILVSGSTDRTV 185 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS--T--TEEEEEETTSCE
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcC--C--CEEEEEeCCCCE
Confidence 4567889999885 66666 56799999999999999999999999886332 334444433 3 289999999999
Q ss_pred EEEECCCCceeEEEcccCCCeeEEEEe--cCCCEEEEEeCCCCEEEEEcCCCeEE----------------------EEe
Q 009597 353 VQWDMNTKEITQEYDQHLGAVNTITFV--DSNRRFVTSSDDKSLRVWEFGIPVVI----------------------KYI 408 (531)
Q Consensus 353 ~iwd~~t~~~~~~~~~h~~~I~~l~~s--p~~~~l~s~s~Dg~I~iwd~~~~~~~----------------------~~~ 408 (531)
++||+++++.+..+.+|...|.+++|+ +++.+|++++.|+.|++||+...... ...
T Consensus 186 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 186 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred EEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 999999999999999999999999999 47789999999999999999876432 122
Q ss_pred eCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 009597 409 SEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488 (531)
Q Consensus 409 ~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd 488 (531)
...|...+.++ ++++.+|++++.|+.|++||++++..+ ..+.+|. ..+.+++|+|++.+|++|+.||.|++||
T Consensus 266 ~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~---~~~~~~~--~~v~~~~~~~~~~~l~sg~~dg~i~vwd 338 (464)
T 3v7d_B 266 LRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCL---YILSGHT--DRIYSTIYDHERKRCISASMDTTIRIWD 338 (464)
T ss_dssp ECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEE---EEECCCS--SCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEE---EEecCCC--CCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 33466666655 678999999999999999999987554 4455663 5589999999999999999999999999
Q ss_pred CCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 489 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 489 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+++++++..+.+|...|.++.|++ .+|++++.||.|++||
T Consensus 339 ~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd 378 (464)
T 3v7d_B 339 LENGELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWD 378 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEE
Confidence 999999999999999999999974 7999999999999997
No 88
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=3.2e-30 Score=268.51 Aligned_cols=274 Identities=15% Similarity=0.272 Sum_probs=214.7
Q ss_pred HHHHHHhhhhccCCCCCCCceeeeeecccCe-----------eeEEecCcc------------CceEEEEEccCC--CEE
Q 009597 245 AEEYAKKKEEKGNAGGEKGEHVEDKSTFHGK-----------CMRTYMGHS------------KAVRDISFCNDG--TKF 299 (531)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------~~~~l~gH~------------~~V~~l~fspdg--~~l 299 (531)
+.++++.+++..+++++.++.|.+|+...++ ++..+.+|. ..|++++|+|++ .+|
T Consensus 31 V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l 110 (447)
T 3dw8_B 31 ISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQF 110 (447)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceE
Confidence 4456677888889999999999999988776 688999998 889999999998 799
Q ss_pred EEEecCCeEEEEeCCCCcEE---------------------------------------EEcc--CCCcceEEEEccCCC
Q 009597 300 LTASYDKNIKYWDTETGQVI---------------------------------------RTFS--TGKIPYVVKLNPDDD 338 (531)
Q Consensus 300 ~s~s~Dg~I~vWd~~t~~~i---------------------------------------~~~~--~~~~~~~~~~~~~~~ 338 (531)
++++.|++|++||+.++... ..+. +...+..+.++++
T Consensus 111 ~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-- 188 (447)
T 3dw8_B 111 LLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD-- 188 (447)
T ss_dssp EEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT--
T ss_pred EEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC--
Confidence 99999999999998764432 1222 2333455666663
Q ss_pred CCcEEEEeeCCCeEEEEECCC-CceeEE-------EcccCCCeeEEEEecCC-CEEEEEeCCCCEEEEEcCCCeE----E
Q 009597 339 KQNILLAGMSDKKIVQWDMNT-KEITQE-------YDQHLGAVNTITFVDSN-RRFVTSSDDKSLRVWEFGIPVV----I 405 (531)
Q Consensus 339 ~~~~l~sg~~dg~I~iwd~~t-~~~~~~-------~~~h~~~I~~l~~sp~~-~~l~s~s~Dg~I~iwd~~~~~~----~ 405 (531)
+.+|++| .|+.|++||+++ +..+.. +..|...|.+++|+|++ ++|++++.||.|++||++++.. +
T Consensus 189 -~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 189 -YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp -SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred -CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence 4678888 799999999984 444442 56899999999999998 9999999999999999998765 4
Q ss_pred EEeeCCCCC------------CccEEEEeCCCCEEEEEEcCCeEEEEEcCC-cceeceeeeecCCccccc----------
Q 009597 406 KYISEPHMH------------SMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGY---------- 462 (531)
Q Consensus 406 ~~~~~~~~~------------~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~---------- 462 (531)
..+.. |.. .|.+++|+|++++|++++. +.|++||++. +..+ ..+.+|.....
T Consensus 267 ~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 267 KLFEE-PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPV---ETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp EEECC-C-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCS---CCEESCGGGTTTHHHHHHTSG
T ss_pred eEecc-CCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccc---ceeeccccccccccccccccc
Confidence 44433 443 8999999999999999999 9999999986 5433 34444532111
Q ss_pred ---eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecc---------------------------------CCcEE
Q 009597 463 ---ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH---------------------------------EGVCI 506 (531)
Q Consensus 463 ---v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h---------------------------------~~~V~ 506 (531)
+..++|+|++++|++|+.||.|+|||+.+++.+. +.+| ...|.
T Consensus 342 i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 420 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL 420 (447)
T ss_dssp GGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred cccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence 2348999999999999999999999999988763 3322 34688
Q ss_pred EEEEecCCCCEEEEEeCCCCEEee
Q 009597 507 GCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 507 ~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
.++|+| ++.+|++++.++ +++|
T Consensus 421 ~~~~~p-~~~~la~~~~~~-~~~~ 442 (447)
T 3dw8_B 421 HTAWHP-KENIIAVATTNN-LYIF 442 (447)
T ss_dssp EEEECS-SSSEEEEECSSC-EEEE
T ss_pred EEEECC-CCCEEEEEecce-eeee
Confidence 999999 778999988776 6665
No 89
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.3e-29 Score=247.41 Aligned_cols=239 Identities=22% Similarity=0.348 Sum_probs=204.3
Q ss_pred CeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeE
Q 009597 274 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKI 352 (531)
Q Consensus 274 ~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I 352 (531)
.++++++.+|.+.|++++| +++++|++|+.||.|++||+.++.....+..+ .....+.+.++ +.+|++|+.||.|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i 83 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSE---KELLLFGGKDTMI 83 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETT---TTEEEEEETTSCE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCC---CCEEEEecCCCeE
Confidence 4788999999999999999 99999999999999999999998887777543 34456666663 4689999999999
Q ss_pred EEEECCCC---ceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeC-CCCEE
Q 009597 353 VQWDMNTK---EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP-NTNWL 428 (531)
Q Consensus 353 ~iwd~~t~---~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp-~~~~l 428 (531)
++|++... +.+..+..|...|.++.| ++++|++++.|+.|++|| .......+. .|...+.+++|+| ++.+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~-~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQ-AHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEE-CCSSCEEEEEEEETTTTEE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecc-cCCCceeEEEEccCCCCEE
Confidence 99998654 567788999999999999 578999999999999999 555555554 4889999999998 99999
Q ss_pred EEEEcCCeEEEEEcCCcceeceeeeecC-CccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEE
Q 009597 429 AAQSLDNQILIYSTRERFQLNKKKRFAG-HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507 (531)
Q Consensus 429 ~s~s~Dg~I~iwd~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~ 507 (531)
++++.|+.|++||.... ...+.. | ...+.+++|+|++. |++++.||.|++||+++++++..+..|.+.|.+
T Consensus 159 ~~~~~d~~i~i~d~~~~-----~~~~~~~~--~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~ 230 (313)
T 3odt_A 159 LTASADKTIKLWQNDKV-----IKTFSGIH--NDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYC 230 (313)
T ss_dssp EEEETTSCEEEEETTEE-----EEEECSSC--SSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred EEEECCCCEEEEecCce-----EEEEeccC--cccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEE
Confidence 99999999999994432 223333 3 45688999999998 889999999999999999999999999999999
Q ss_pred EEEecCCCCEEEEEeCCCCEEeeC
Q 009597 508 CEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 508 v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++|+| ++ .|++++.||.|++||
T Consensus 231 ~~~~~-~~-~l~~~~~dg~v~iwd 252 (313)
T 3odt_A 231 IKLLP-NG-DIVSCGEDRTVRIWS 252 (313)
T ss_dssp EEECT-TS-CEEEEETTSEEEEEC
T ss_pred EEEec-CC-CEEEEecCCEEEEEE
Confidence 99999 55 589999999999997
No 90
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=8.6e-30 Score=252.09 Aligned_cols=240 Identities=20% Similarity=0.317 Sum_probs=191.9
Q ss_pred HHhhhhccCCCCCCCceeeeeeccc--CeeeEEecCccCceEEEEEccC--CCEEEEEecCCeEEEEeCCCCc--EEEEc
Q 009597 249 AKKKEEKGNAGGEKGEHVEDKSTFH--GKCMRTYMGHSKAVRDISFCND--GTKFLTASYDKNIKYWDTETGQ--VIRTF 322 (531)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~l~gH~~~V~~l~fspd--g~~l~s~s~Dg~I~vWd~~t~~--~i~~~ 322 (531)
+.+++++.+++++.++.+++|+... .+++.++.+|.++|.+++|+++ +++|+||+.|++|+|||+.+++ .+..+
T Consensus 16 ~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~ 95 (297)
T 2pm7_B 16 VMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVH 95 (297)
T ss_dssp EECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEe
Confidence 3556778888999999999999763 4788999999999999999863 8999999999999999998874 44444
Q ss_pred cC-CCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc--eeEEEcccCCCeeEEEEecC-------------CCEEE
Q 009597 323 ST-GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE--ITQEYDQHLGAVNTITFVDS-------------NRRFV 386 (531)
Q Consensus 323 ~~-~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~--~~~~~~~h~~~I~~l~~sp~-------------~~~l~ 386 (531)
.. ...+..+.|.+.. .+.+|++|+.|+.|++||++++. ....+..|...|.+++|+|+ +++|+
T Consensus 96 ~~h~~~v~~v~~~p~~-~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~ 174 (297)
T 2pm7_B 96 AVHSASVNSVQWAPHE-YGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV 174 (297)
T ss_dssp CCCSSCEEEEEECCGG-GCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEE
T ss_pred ecCCCceeEEEeCcCC-CCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEE
Confidence 32 3345566666642 14689999999999999998763 24677889999999999996 57999
Q ss_pred EEeCCCCEEEEEcCCCe----EEEEeeCCCCCCccEEEEeCCC---CEEEEEEcCCeEEEEEcCCcceeceeeeecCCcc
Q 009597 387 TSSDDKSLRVWEFGIPV----VIKYISEPHMHSMPSISLHPNT---NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459 (531)
Q Consensus 387 s~s~Dg~I~iwd~~~~~----~~~~~~~~~~~~v~~v~~sp~~---~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 459 (531)
+|+.|++|+|||++.+. ....+ ..|...|.+++|+|++ .+|++++.|++|+|||++..........+..+..
T Consensus 175 sgs~D~~v~lwd~~~~~~~~~~~~~l-~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~ 253 (297)
T 2pm7_B 175 TGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF 253 (297)
T ss_dssp EEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCC
T ss_pred EEcCCCcEEEEEEcCCCceEEEEEEe-cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccC
Confidence 99999999999998754 33333 4699999999999984 8999999999999999976432111122211222
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 009597 460 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 490 (531)
Q Consensus 460 ~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~ 490 (531)
...+.+++|+|+|++|++++.||.|+||+..
T Consensus 254 ~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 254 PDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 4668999999999999999999999999976
No 91
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-30 Score=290.89 Aligned_cols=251 Identities=20% Similarity=0.288 Sum_probs=204.7
Q ss_pred eEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCC--CCcEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEE
Q 009597 277 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTE--TGQVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIV 353 (531)
Q Consensus 277 ~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~--t~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~ 353 (531)
+..+.+|.+.|++++|+|++++|++|+.||.|+|||+. ++..+..+..+ ..+.++.|.+.. .+.+|++|+.||.|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK-FGTILASCSYDGKVL 80 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTT-SCSEEEEEETTSCEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCC-CCCEEEEEeCCCeEE
Confidence 45788999999999999999999999999999999998 45666666533 234455555542 247899999999999
Q ss_pred EEECCCCc--eeEEEcccCCCeeEEEEecC--CCEEEEEeCCCCEEEEEcCCCeE-EEEeeCCCCCCccEEEEeC-----
Q 009597 354 QWDMNTKE--ITQEYDQHLGAVNTITFVDS--NRRFVTSSDDKSLRVWEFGIPVV-IKYISEPHMHSMPSISLHP----- 423 (531)
Q Consensus 354 iwd~~t~~--~~~~~~~h~~~I~~l~~sp~--~~~l~s~s~Dg~I~iwd~~~~~~-~~~~~~~~~~~v~~v~~sp----- 423 (531)
+||+.+++ .+..+..|...|.+++|+|+ +++|++++.||.|++||++.+.. .......|...|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 99999887 77888899999999999999 99999999999999999987622 1122245888999999999
Q ss_pred --------CCCEEEEEEcCCeEEEEEcCCccee-ceeeeecCCccccceEEEEEcCC---CCEEEEEeCCCcEEEEECCC
Q 009597 424 --------NTNWLAAQSLDNQILIYSTRERFQL-NKKKRFAGHIVAGYACQVNFSPD---GRFVMSGDGEGKCWFWDWKS 491 (531)
Q Consensus 424 --------~~~~l~s~s~Dg~I~iwd~~~~~~~-~~~~~~~~~~~~~~v~~l~~spd---g~~l~sgs~dg~I~iwd~~~ 491 (531)
++.+|++++.||.|++||++++... .....+.+|. ..|.+++|+|+ +.+|++|+.||.|++||+++
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~--~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC--CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 5899999999999999999876432 3334566664 56999999999 99999999999999999988
Q ss_pred Ce-----EEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 492 CK-----VFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 492 ~~-----~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+. .+.....|.+.|.+++|+| ++.+|++++.||.|++||
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCEEECT-TTCCEEEECSSSCEECCB
T ss_pred CCCcceeEEeccCCCCCceEEEEEcC-CCCEEEEEcCCCEEEEEe
Confidence 64 3334456888999999999 788999999999999997
No 92
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1e-29 Score=265.03 Aligned_cols=247 Identities=19% Similarity=0.328 Sum_probs=203.6
Q ss_pred EEecCccCceEEEEEccC-CCEEEEEecCCeEEEEeCCC----------CcEEEEccCC-CcceEEEEccCCCCCcEEEE
Q 009597 278 RTYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDTET----------GQVIRTFSTG-KIPYVVKLNPDDDKQNILLA 345 (531)
Q Consensus 278 ~~l~gH~~~V~~l~fspd-g~~l~s~s~Dg~I~vWd~~t----------~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~s 345 (531)
....+|.+.|++++|+|+ +.+|++++.||.|+||++.+ ...+..+..+ ..+..+.|++.. ..+|++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~--~~~l~s 199 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNL--NGYLLS 199 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTS--TTEEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCC--CCeEEE
Confidence 455679999999999997 77999999999999999976 4555655433 334566666643 348999
Q ss_pred eeCCCeEEEEECCCCce-------eEEEcccCCCeeEEEEec-CCCEEEEEeCCCCEEEEEcCCC---eEEEEeeCCCCC
Q 009597 346 GMSDKKIVQWDMNTKEI-------TQEYDQHLGAVNTITFVD-SNRRFVTSSDDKSLRVWEFGIP---VVIKYISEPHMH 414 (531)
Q Consensus 346 g~~dg~I~iwd~~t~~~-------~~~~~~h~~~I~~l~~sp-~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~~~~ 414 (531)
|+.||.|++||+.++.. ...+..|...|.+++|+| ++.+|++++.|+.|++||++.. ..+..+. .|..
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~ 278 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTA 278 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSS
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCCC
Confidence 99999999999987422 567788999999999999 7789999999999999999976 3444443 5889
Q ss_pred CccEEEEeCCCC-EEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCC-EEEEEeCCCcEEEEECCC-
Q 009597 415 SMPSISLHPNTN-WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR-FVMSGDGEGKCWFWDWKS- 491 (531)
Q Consensus 415 ~v~~v~~sp~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~l~sgs~dg~I~iwd~~~- 491 (531)
.|.+++|+|++. +|++|+.||.|++||++.... .+..+.+| ...|.+++|+|++. +|++++.||.|+|||+..
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--~~~~~~~h--~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKL--KLHSFESH--KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--CSEEEECC--SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC--CeEEeecC--CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 999999999887 688999999999999987432 23445556 35699999999985 699999999999999986
Q ss_pred -------------CeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 492 -------------CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 492 -------------~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++..+.+|...|.+++|+|++..+|++++.||.|+||+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 3677888899999999999994444999999999999996
No 93
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=5.5e-30 Score=267.42 Aligned_cols=249 Identities=15% Similarity=0.154 Sum_probs=194.3
Q ss_pred eeEEecCccCceEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEEcc---CCCcceEEEEccCCCCCcEEEEeeCCCe
Q 009597 276 CMRTYMGHSKAVRDISFCN-DGTKFLTASYDKNIKYWDTETGQVIRTFS---TGKIPYVVKLNPDDDKQNILLAGMSDKK 351 (531)
Q Consensus 276 ~~~~l~gH~~~V~~l~fsp-dg~~l~s~s~Dg~I~vWd~~t~~~i~~~~---~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 351 (531)
..+...+|...|+||+|+| ++++||+|+.||.|+|||+.+++....+. +...+.++.|++. ++++|++|+.||+
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~--~~~~l~s~s~D~~ 188 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL--NTNQFYASSMEGT 188 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS--CTTEEEEECSSSC
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC--CCCEEEEEeCCCE
Confidence 3456678999999999999 56789999999999999998876544332 2344566666653 3478999999999
Q ss_pred EEEEECCCCceeEEEcc--cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCC-EE
Q 009597 352 IVQWDMNTKEITQEYDQ--HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN-WL 428 (531)
Q Consensus 352 I~iwd~~t~~~~~~~~~--h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~-~l 428 (531)
|++||++++........ +...+.+++|+|++++|++|+.||.|++||++... +..+ ..|...|.+++|+|++. +|
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~~~~-~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-LWNL-RMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-CCCS-BCCSSCEEEEEECTTCSSEE
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-eEEE-ecccceEEeeeecCCCceEE
Confidence 99999987655444433 34467899999999999999999999999997543 3333 35889999999999875 78
Q ss_pred EEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCC-----
Q 009597 429 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG----- 503 (531)
Q Consensus 429 ~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~----- 503 (531)
++++.|+.|+|||++............+| ...|.+++|+|+|.+|++|+.||.|+|||+.++.+...+..|..
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~~~~~~~~~h--~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGKASFLYSLPH--RHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQH 344 (435)
T ss_dssp EEEETTSBCCEEETTTCCSSSCCSBCCBC--SSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSS
T ss_pred EEecCcceeeEEecccccccceEEEeeec--cccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccc
Confidence 89999999999999886655444444556 45699999999999999999999999999999988887776643
Q ss_pred -cEEEEEEecCCCCEEEEEe------------CCCCEEeeC
Q 009597 504 -VCIGCEWHPLEQSKVATCG------------WDGLIKYWD 531 (531)
Q Consensus 504 -~V~~v~~~p~~~~~l~t~s------------~Dg~I~iWD 531 (531)
.+..+.|+| .+.++++++ .++.|++||
T Consensus 345 ~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd 384 (435)
T 4e54_B 345 LTPIKAAWHP-RYNLIVVGRYPDPNFKSCTPYELRTIDVFD 384 (435)
T ss_dssp SCCCBCEECS-SSSCEEEECCCCTTSCCSSTTCCCCEEEEC
T ss_pred ceeEEEEEcC-CCCEEEEEEcCCCCeEEEEecCCCEEEEEE
Confidence 244567887 445555543 235799997
No 94
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=5e-29 Score=269.90 Aligned_cols=272 Identities=14% Similarity=0.159 Sum_probs=230.4
Q ss_pred HHHhh--hhccCCCCCCCceeeeeecccC--------eeeEEecCccCceEEEEEccCCCEEEEEecC----CeEEEEeC
Q 009597 248 YAKKK--EEKGNAGGEKGEHVEDKSTFHG--------KCMRTYMGHSKAVRDISFCNDGTKFLTASYD----KNIKYWDT 313 (531)
Q Consensus 248 ~~~~~--~~~~~~~~~~~~~i~~~~~~~~--------~~~~~l~gH~~~V~~l~fspdg~~l~s~s~D----g~I~vWd~ 313 (531)
++..+ +++.++.++.++.+.+|+..++ +++..+.+|...|.+++|+|++++|++++.+ +.|++||
T Consensus 70 ~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d- 148 (615)
T 1pgu_A 70 VKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD- 148 (615)
T ss_dssp EEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-
T ss_pred EEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-
Confidence 34456 6777888888999999999744 8889999999999999999999999999988 6888888
Q ss_pred CCCcEEEEccCCC-cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCC---CeeEEEEecC-CCEEEEE
Q 009597 314 ETGQVIRTFSTGK-IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLG---AVNTITFVDS-NRRFVTS 388 (531)
Q Consensus 314 ~t~~~i~~~~~~~-~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~---~I~~l~~sp~-~~~l~s~ 388 (531)
+++.+..+..+. ....+.|.+ +...++++++.|+.|++||+.+++.+..+..|.. .|.+++|+|+ +++|+++
T Consensus 149 -~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 225 (615)
T 1pgu_A 149 -SGNSLGEVSGHSQRINACHLKQ--SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITV 225 (615)
T ss_dssp -TCCEEEECCSCSSCEEEEEECS--SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEE
T ss_pred -CCCcceeeecCCccEEEEEECC--CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEE
Confidence 567777775432 234445544 4435899999999999999999999999999999 9999999999 9999999
Q ss_pred eCCCCEEEEEcCCCeEEEEeeC---CCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEE
Q 009597 389 SDDKSLRVWEFGIPVVIKYISE---PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 465 (531)
Q Consensus 389 s~Dg~I~iwd~~~~~~~~~~~~---~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 465 (531)
+.|+.|++||++++..+..+.. .|...|.+++|+ ++.+|++++.|+.|++||++++..+....... ......+.+
T Consensus 226 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~ 303 (615)
T 1pgu_A 226 GSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDK-QQLGNQQVG 303 (615)
T ss_dssp ETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCT-TCGGGCEEE
T ss_pred eCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC-CcccCceeE
Confidence 9999999999999998888744 689999999999 99999999999999999999876554333221 122345777
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 466 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 466 l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+.|+ ++.+|++++.+|.|++||+.+++.+..+.+|...|.+++| | + |++++.||.|++||
T Consensus 304 ~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~-~---l~~~~~dg~i~~w~ 363 (615)
T 1pgu_A 304 VVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-N-P---LISGSYDGRIMEWS 363 (615)
T ss_dssp EEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-T-T---TEEEETTSCEEETT
T ss_pred EEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-c-C---cEEECCCCeEEEEE
Confidence 7785 8999999999999999999999999999999999999999 8 4 88888888888886
No 95
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.8e-29 Score=285.00 Aligned_cols=151 Identities=15% Similarity=0.108 Sum_probs=125.3
Q ss_pred HhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEE-E-------
Q 009597 250 KKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIR-T------- 321 (531)
Q Consensus 250 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~-~------- 321 (531)
+.+ ++.+++++.++.|++|+..+++++.++. |...|++++|+|++++|++|+.||.|++||+.++++.. .
T Consensus 66 fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~ 143 (902)
T 2oaj_A 66 FVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKS 143 (902)
T ss_dssp EET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHH
T ss_pred EcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccccc
Confidence 344 4467778889999999999999999997 77899999999999999999999999999999887641 1
Q ss_pred ---cc-CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEccc------------------CCCeeEEEEe
Q 009597 322 ---FS-TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQH------------------LGAVNTITFV 379 (531)
Q Consensus 322 ---~~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h------------------~~~I~~l~~s 379 (531)
+. +...+..+.|++. ...++++|+.||.| +||+++++++..+..| ...|.+++|+
T Consensus 144 ~~~~~~h~~~V~sl~~sp~--~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs 220 (902)
T 2oaj_A 144 SFFPAARLSPIVSIQWNPR--DIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH 220 (902)
T ss_dssp HTCSSSCCCCCCEEEEETT--EEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC
T ss_pred ccccccCCCCeEEEEEccC--CCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEc
Confidence 11 1234556666664 33689999999999 9999999999888766 5789999999
Q ss_pred cCCCEEEEEeCCCCEEEEEcCCCeEE
Q 009597 380 DSNRRFVTSSDDKSLRVWEFGIPVVI 405 (531)
Q Consensus 380 p~~~~l~s~s~Dg~I~iwd~~~~~~~ 405 (531)
|++++|++++.||+|++||+++++.+
T Consensus 221 pdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 221 PNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp TTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCeEEEEECCCCcEE
Confidence 99999999999999999999765443
No 96
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=7.7e-31 Score=308.20 Aligned_cols=274 Identities=20% Similarity=0.306 Sum_probs=240.0
Q ss_pred HHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCc
Q 009597 248 YAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327 (531)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~ 327 (531)
+..++++..++.+..++.+.+|+...++.+..+.+|...|++++|+|+|++|++++.||.|++||+.+++.+........
T Consensus 967 ~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 1046 (1249)
T 3sfz_A 967 CCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQET 1046 (1249)
T ss_dssp EEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSC
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCc
Confidence 34556677788888999999999999999999999999999999999999999999999999999999988765544445
Q ss_pred ceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEE
Q 009597 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKY 407 (531)
Q Consensus 328 ~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~ 407 (531)
...+.+.+. ..+++++.||.|++||+.+++.+..+..|.+.|.+++|+|++++|++++.|++|++||+.++..+..
T Consensus 1047 v~~~~~~~~----~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~ 1122 (1249)
T 3sfz_A 1047 VKDFRLLQD----SRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHE 1122 (1249)
T ss_dssp EEEEEECSS----SEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBC
T ss_pred EEEEEEcCC----CcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeee
Confidence 555555552 4689999999999999999999999999999999999999999999999999999999998876655
Q ss_pred eeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeee------ecCCccccceEEEEEcCCCCEEEEEeCC
Q 009597 408 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR------FAGHIVAGYACQVNFSPDGRFVMSGDGE 481 (531)
Q Consensus 408 ~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~------~~~~~~~~~v~~l~~spdg~~l~sgs~d 481 (531)
+. .|...|.+++|+|++.+|++++.||.|++||+.++..+..... ..+| .+.|.+++|+|+|.+|++++
T Consensus 1123 l~-~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~v~~l~fs~dg~~l~s~~-- 1197 (1249)
T 3sfz_A 1123 LK-GHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATH--GGWVTDVCFSPDSKTLVSAG-- 1197 (1249)
T ss_dssp CC-CCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------C--CSCCCEEEECTTSSCEEEES--
T ss_pred ec-cCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEecccccccccccc--CceEEEEEECCCCCEEEECC--
Confidence 54 4888999999999999999999999999999998765543311 1334 45688999999999999986
Q ss_pred CcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 482 GKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 482 g~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|.|++||+.+++.+..+..|...|.+++|+| ++.+|++++.||.|++|+
T Consensus 1198 g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~-dg~~l~~~~~dg~v~vw~ 1246 (1249)
T 3sfz_A 1198 GYLKWWNVATGDSSQTFYTNGTNLKKIHVSP-DFRTYVTVDNLGILYILQ 1246 (1249)
T ss_dssp SSEEEBCSSSCBCCCCCCCSSCCCCCCEECS-SSCCEEEECTTCCEEEEC
T ss_pred CeEEEEECCCCceeeeeeccCCcccEEEECC-CCCEEEEecCCcEEEEEe
Confidence 8999999999999999999999999999999 778999999999999997
No 97
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.4e-29 Score=251.99 Aligned_cols=269 Identities=8% Similarity=0.011 Sum_probs=205.4
Q ss_pred hhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCC---------CCcEEEEc
Q 009597 252 KEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTE---------TGQVIRTF 322 (531)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~---------t~~~i~~~ 322 (531)
.++..+++++.++.|++|+..+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+..+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~ 120 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREI 120 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEe
Confidence 345667889999999999999999998887 678999999998 9999999999999655 56666666
Q ss_pred cCCCcceEEEEccCC-CCCcEEEEeeCCCeEEEEECCCCceeEEEc-ccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcC
Q 009597 323 STGKIPYVVKLNPDD-DKQNILLAGMSDKKIVQWDMNTKEITQEYD-QHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400 (531)
Q Consensus 323 ~~~~~~~~~~~~~~~-~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~-~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~ 400 (531)
...+...+..+.+.+ ..+.++++|+.||.|++||+++++.+..+. .|...|.+++|+|++.+|++|+.||.|+|||++
T Consensus 121 ~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 121 EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 555443344444433 124689999999999999999999877764 455689999999999999999999999999999
Q ss_pred CCeEE-EEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEe
Q 009597 401 IPVVI-KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD 479 (531)
Q Consensus 401 ~~~~~-~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs 479 (531)
++..+ ..+...|...|.+++|+|++.+|++++ ++.|++||++....+..+..+..|.......+++|+|+|++|++++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence 98776 555444899999999999999999999 5599999999876654444443332221124699999999999999
Q ss_pred C-CCcEEEEECCCCeEEEEeeccCCcEEEEEEecC--CCCEEEEEeCCCCEEee
Q 009597 480 G-EGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPL--EQSKVATCGWDGLIKYW 530 (531)
Q Consensus 480 ~-dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~--~~~~l~t~s~Dg~I~iW 530 (531)
. |+.|+||++......... .++..+.|.++ +...|++++.||.+.++
T Consensus 280 ~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 280 NESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp TTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred CCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEE
Confidence 8 999999998654432222 34566677662 33467777778877764
No 98
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=8.5e-29 Score=251.54 Aligned_cols=245 Identities=13% Similarity=0.108 Sum_probs=185.0
Q ss_pred ecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCC
Q 009597 270 STFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 349 (531)
Q Consensus 270 ~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 349 (531)
+..+.+++.++.+|...|++++|+|||++|++|+.+ .++||++.+++.+...... ...++.+.+.. ..++++|+.|
T Consensus 5 s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~d 80 (355)
T 3vu4_A 5 SMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMR-HLSKVRMLHRT--NYVAFVTGVK 80 (355)
T ss_dssp --------------CCCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEECS-CCCEEEECTTS--SEEEEECSST
T ss_pred cccccCCccccccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeecC-CeEEEEEcCCC--CEEEEEECCc
Confidence 334466777889999999999999999999998876 4789999988777665433 35556666543 2455788889
Q ss_pred CeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCC-eEEEEeeCCCCCCccEEEEeCCCCEE
Q 009597 350 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP-VVIKYISEPHMHSMPSISLHPNTNWL 428 (531)
Q Consensus 350 g~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~-~~~~~~~~~~~~~v~~v~~sp~~~~l 428 (531)
++|++||+.+++.+..+. |...|.++.|+++. ++++ .|+.|++||+.+. +.+..+.. ....+++++ .++
T Consensus 81 ~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~l 150 (355)
T 3vu4_A 81 EVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GLL 150 (355)
T ss_dssp TEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TEE
T ss_pred cEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEEc--cEE
Confidence 999999999999999887 66799999998753 4444 3788999999887 44433322 344566776 566
Q ss_pred EE--EEcCCeEEEEEcCCccee------------ce-eeeecCCccccceEEEEEcCCCCEEEEEeCCCc-EEEEECCCC
Q 009597 429 AA--QSLDNQILIYSTRERFQL------------NK-KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK-CWFWDWKSC 492 (531)
Q Consensus 429 ~s--~s~Dg~I~iwd~~~~~~~------------~~-~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~-I~iwd~~~~ 492 (531)
++ |+.||.|++||+.++... .. ...+.+|. ..|.+++|+|+|++|++|+.||+ |+|||++++
T Consensus 151 a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~--~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~ 228 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT--NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG 228 (355)
T ss_dssp EEEESSCTTCEEEEECCC------------------CCEEECCCS--SCEEEEEECTTSSEEEEEETTCSEEEEEETTTC
T ss_pred EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccC--CceEEEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 66 578999999999875311 11 45577774 56999999999999999999998 999999999
Q ss_pred eEEEEee-c-cCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 493 KVFRTLK-C-HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 493 ~~~~~~~-~-h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+++..+. + |...|.+++|+| ++.+|++++.|++|++||
T Consensus 229 ~~~~~~~~g~h~~~v~~~~~s~-~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 229 VLVREFRRGLDRADVVDMKWST-DGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp CEEEEEECTTCCSCEEEEEECT-TSCEEEEEETTCEEEEEE
T ss_pred cEEEEEEcCCCCCcEEEEEECC-CCCEEEEEECCCEEEEEE
Confidence 9999998 5 999999999999 888999999999999997
No 99
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=3.8e-29 Score=249.83 Aligned_cols=240 Identities=17% Similarity=0.248 Sum_probs=192.8
Q ss_pred HHHHhhhhccCCCCCCCceeeeeecccCe--eeEEecCccCceEEEEEcc--CCCEEEEEecCCeEEEEeCCCCc--EEE
Q 009597 247 EYAKKKEEKGNAGGEKGEHVEDKSTFHGK--CMRTYMGHSKAVRDISFCN--DGTKFLTASYDKNIKYWDTETGQ--VIR 320 (531)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~l~gH~~~V~~l~fsp--dg~~l~s~s~Dg~I~vWd~~t~~--~i~ 320 (531)
+++..++++.+++++.++.+++|+...++ ++.++.+|...|.+++|++ ++++|++|+.|++|+|||++++. .+.
T Consensus 18 ~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~ 97 (316)
T 3bg1_A 18 DAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSH 97 (316)
T ss_dssp EEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEE
T ss_pred EeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEE
Confidence 34456778889999999999999987764 5788999999999999986 48899999999999999998874 455
Q ss_pred EccC-CCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCce---eEEEcccCCCeeEEEEecC---------------
Q 009597 321 TFST-GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI---TQEYDQHLGAVNTITFVDS--------------- 381 (531)
Q Consensus 321 ~~~~-~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~---~~~~~~h~~~I~~l~~sp~--------------- 381 (531)
.+.. ...+..+.|+++.. +.+|++|+.|+.|++||++.+.. ...+..|...|.+++|+|+
T Consensus 98 ~~~~h~~~V~~v~~~p~~~-g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~ 176 (316)
T 3bg1_A 98 EHAGHDSSVNSVCWAPHDY-GLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKP 176 (316)
T ss_dssp EECCCSSCCCEEEECCTTT-CSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCC
T ss_pred EccCCCCceEEEEECCCCC-CcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCc
Confidence 5543 33456777777532 46899999999999999987632 3456789999999999997
Q ss_pred --CCEEEEEeCCCCEEEEEcCCC---eEEEEeeCCCCCCccEEEEeCCC----CEEEEEEcCCeEEEEEcCCccee-cee
Q 009597 382 --NRRFVTSSDDKSLRVWEFGIP---VVIKYISEPHMHSMPSISLHPNT----NWLAAQSLDNQILIYSTRERFQL-NKK 451 (531)
Q Consensus 382 --~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~~~~~v~~v~~sp~~----~~l~s~s~Dg~I~iwd~~~~~~~-~~~ 451 (531)
+++|++++.|++|++||++.. ..+..+ ..|...|.+++|+|++ .+|++++.|++|+||++...... ...
T Consensus 177 ~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~ 255 (316)
T 3bg1_A 177 NYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSP 255 (316)
T ss_dssp CCCCBEECCBTTSBCCEEEECTTSCEEEEECC-BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBC
T ss_pred cccceEEEecCCCeEEEEEeCCCCccceeeec-ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhh
Confidence 468999999999999999755 333333 4688999999999986 89999999999999998763110 111
Q ss_pred eeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 009597 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 490 (531)
Q Consensus 452 ~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~ 490 (531)
..+..| ...|.+++|+|++++|++++.||.|+||+..
T Consensus 256 ~~~~~~--~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 256 KLLHKF--NDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CEEEEC--SSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred hhhhcC--CCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 223334 4568999999999999999999999999975
No 100
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.2e-27 Score=244.80 Aligned_cols=263 Identities=16% Similarity=0.177 Sum_probs=218.6
Q ss_pred cCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEE-EEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEc
Q 009597 256 GNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKF-LTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334 (531)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l-~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~ 334 (531)
+.+.+..++.|++|+..+++++..+.+|.. +.+++|+|++++| ++++.|+.|++||+.+++++..+..+..+..+.++
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~s 82 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVS 82 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEEC
Confidence 345667789999999999999999998864 8999999999876 67778999999999999999999888777777777
Q ss_pred cCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEE-EEEeCCCCEEEEEcCCCeEEEEeeCCCC
Q 009597 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF-VTSSDDKSLRVWEFGIPVVIKYISEPHM 413 (531)
Q Consensus 335 ~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l-~s~s~Dg~I~iwd~~~~~~~~~~~~~~~ 413 (531)
++. ..+++++..++.|++||+.+++.+..+..| ..+.+++|+|++++| ++++.|+.|++||+.+++.+..+.. .
T Consensus 83 pdg--~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~ 157 (391)
T 1l0q_A 83 PDG--KQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV--G 157 (391)
T ss_dssp TTS--SEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--C
T ss_pred CCC--CEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec--C
Confidence 643 345567777899999999999998888755 568999999999977 6888899999999999988877653 3
Q ss_pred CCccEEEEeCCCCEE-EEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEe---CCCcEEEEEC
Q 009597 414 HSMPSISLHPNTNWL-AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD---GEGKCWFWDW 489 (531)
Q Consensus 414 ~~v~~v~~sp~~~~l-~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs---~dg~I~iwd~ 489 (531)
..+.+++|+|++++| ++++.++.|++||++++...... .. ...+.+++|+|++++|++++ .++.|++||+
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~---~~---~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV---KV---EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE---EC---SSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE---ec---CCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 567899999999887 56677899999999887554322 22 23477899999999999888 6899999999
Q ss_pred CCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 490 KSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 490 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++.+..+..|.. +.+++|+|++..++++++.|+.|++||
T Consensus 232 ~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 232 GTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVID 272 (391)
T ss_dssp TTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence 99999999987764 789999994434447888999999997
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=7.4e-28 Score=251.09 Aligned_cols=235 Identities=25% Similarity=0.460 Sum_probs=201.7
Q ss_pred eEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEE
Q 009597 277 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 356 (531)
Q Consensus 277 ~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd 356 (531)
+....+|...|.++.| ++++|++|+.||.|++||+.+++++..+.. +...+.++.+ .+.+|++|+.||.|++||
T Consensus 126 ~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~---~~~~l~sg~~dg~i~vwd 199 (435)
T 1p22_A 126 IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY---DERVIITGSSDSTVRVWD 199 (435)
T ss_dssp EECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECC-CSSCEEEEEC---CSSEEEEEETTSCEEEEE
T ss_pred EecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcC-CCCcEEEEEE---CCCEEEEEcCCCeEEEEE
Confidence 4445678889999988 788999999999999999999999988864 3444555555 346899999999999999
Q ss_pred CCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEE--EEeeCCCCCCccEEEEeCCCCEEEEEEcC
Q 009597 357 MNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVI--KYISEPHMHSMPSISLHPNTNWLAAQSLD 434 (531)
Q Consensus 357 ~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~--~~~~~~~~~~v~~v~~sp~~~~l~s~s~D 434 (531)
+.+++.+..+..|...|.++.|+ +..|++++.||.|++||+.++... ......|...|.+++| ++++|++++.|
T Consensus 200 ~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d 275 (435)
T 1p22_A 200 VNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD 275 (435)
T ss_dssp SSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred CCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC
Confidence 99999999999999999999996 469999999999999999876543 2344568889999998 68899999999
Q ss_pred CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCC
Q 009597 435 NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 514 (531)
Q Consensus 435 g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~ 514 (531)
|.|++||++++..+ ..+.+|. ..+.++.| ++.+|++|+.||.|++||+++++++..+.+|...|.+++| +
T Consensus 276 g~i~vwd~~~~~~~---~~~~~~~--~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~ 345 (435)
T 1p22_A 276 RTIKVWNTSTCEFV---RTLNGHK--RGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---D 345 (435)
T ss_dssp SEEEEEETTTCCEE---EEEECCS--SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC---C
T ss_pred CeEEEEECCcCcEE---EEEcCCC--CcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe---c
Confidence 99999999987554 4455664 45777888 4789999999999999999999999999999999999999 4
Q ss_pred CCEEEEEeCCCCEEeeC
Q 009597 515 QSKVATCGWDGLIKYWD 531 (531)
Q Consensus 515 ~~~l~t~s~Dg~I~iWD 531 (531)
+.+|++|+.||.|++||
T Consensus 346 ~~~l~sg~~dg~i~vwd 362 (435)
T 1p22_A 346 NKRIVSGAYDGKIKVWD 362 (435)
T ss_dssp SSEEEEEETTSCEEEEE
T ss_pred CCEEEEEeCCCcEEEEE
Confidence 57899999999999997
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.5e-28 Score=253.31 Aligned_cols=242 Identities=14% Similarity=0.162 Sum_probs=197.8
Q ss_pred CccCceEEEEEccCCCEE-EEEecCCeEEEEeCC--CCcEEEEccC---CCcceEEEEccCCCCCcEEEEeeCCCeEEEE
Q 009597 282 GHSKAVRDISFCNDGTKF-LTASYDKNIKYWDTE--TGQVIRTFST---GKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 355 (531)
Q Consensus 282 gH~~~V~~l~fspdg~~l-~s~s~Dg~I~vWd~~--t~~~i~~~~~---~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iw 355 (531)
+|.+.|++++|+|++++| ++|+.||.|+|||+. +++++..+.. ...+..+.|+++ +.+|++|+.+|.|++|
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED---DTTVIIADKFGDVYSI 176 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT---SSEEEEEETTSEEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC---CCEEEEEeCCCcEEEE
Confidence 344479999999999996 899999999999999 8888887742 344456666653 3689999999999999
Q ss_pred ECCCCceeE----EEcccCCCeeEEEEecC---CCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEE
Q 009597 356 DMNTKEITQ----EYDQHLGAVNTITFVDS---NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 428 (531)
Q Consensus 356 d~~t~~~~~----~~~~h~~~I~~l~~sp~---~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l 428 (531)
++.++.... .+.+|...|.+++|+|+ +++|++++.|+.|++||+.++..+..+...|...|.+++|+ ++.+|
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEE
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEE
Confidence 998877544 77889999999999999 99999999999999999999887777666799999999999 99999
Q ss_pred EEEEcCCeEEEEEcCCcceeceeeeec--------CC------------ccccceEEEEEcCCCCEEEEEe-CCCcEEEE
Q 009597 429 AAQSLDNQILIYSTRERFQLNKKKRFA--------GH------------IVAGYACQVNFSPDGRFVMSGD-GEGKCWFW 487 (531)
Q Consensus 429 ~s~s~Dg~I~iwd~~~~~~~~~~~~~~--------~~------------~~~~~v~~l~~spdg~~l~sgs-~dg~I~iw 487 (531)
++++.|+.|++||+.++..+..+.... .| .....+.+++|+|++++|++++ .++.|+||
T Consensus 256 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp EEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 999999999999999876554432110 00 1234588899999999999998 89999999
Q ss_pred EC--CCC---eEEEEeeccCCcEEEEEEecCCCCEEEEEeC-------CCCEEee
Q 009597 488 DW--KSC---KVFRTLKCHEGVCIGCEWHPLEQSKVATCGW-------DGLIKYW 530 (531)
Q Consensus 488 d~--~~~---~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~-------Dg~I~iW 530 (531)
++ .++ +.+..+..| +.|.+++|+| ++ ++++++. +..|.+|
T Consensus 336 ~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~-~~-~~v~~~~~~~~~~~~~~i~v~ 387 (450)
T 2vdu_B 336 EMSEKQKGDLALKQIITFP-YNVISLSAHN-DE-FQVTLDNKESSGVQKNFAKFI 387 (450)
T ss_dssp EECSSSTTCEEEEEEEECS-SCEEEEEEET-TE-EEEEECCTTCCSSCCCSEEEE
T ss_pred EeccCCCCceeeccEeccC-CceEEEEecC-Cc-EEEEEecccCCCCCCcceEEE
Confidence 99 555 778888888 8899999999 54 4555433 4557777
No 103
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.9e-28 Score=273.05 Aligned_cols=243 Identities=11% Similarity=0.097 Sum_probs=200.5
Q ss_pred ecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC
Q 009597 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT 359 (531)
Q Consensus 280 l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t 359 (531)
..||...|++|+|+|++++||+|+.||+|+||+..+.+++..+.....+..+.|++ +.+|++++.|++|++||+.+
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp----g~~L~S~s~D~~v~lWd~~~ 88 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK----GIYLVVINAKDTVYVLSLYS 88 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET----TTEEEEEETTCEEEEEETTT
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC----CCEEEEEECcCeEEEEECCC
Confidence 34899999999999999999999999999999999888887776555666777776 24899999999999999999
Q ss_pred CceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEe----------eCCCCCCccEEEEeCC-CCEE
Q 009597 360 KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYI----------SEPHMHSMPSISLHPN-TNWL 428 (531)
Q Consensus 360 ~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~----------~~~~~~~v~~v~~sp~-~~~l 428 (531)
++++..+. |.+.|++++|+|++++|++|+.||.|++||++++...... ...|...|.+++|+|+ +..|
T Consensus 89 ~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 89 QKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp CSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred CcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 99998886 6789999999999999999999999999999988764221 2457889999999995 5789
Q ss_pred EEEEcCCeEEEEEcCCcceeceeeeecCC----------------ccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 009597 429 AAQSLDNQILIYSTRERFQLNKKKRFAGH----------------IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSC 492 (531)
Q Consensus 429 ~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~----------------~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~ 492 (531)
++++.|+.| +||++++..+.. +.+| .....|.+++|+|+|.+|++|+.||.|++||++++
T Consensus 168 ~~g~~dg~v-lWd~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEIKQS---FIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp EEECSSCEE-EEETTTTEEEEE---ECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred EEEeCCCcE-EEECCCCceEEE---EecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 999999999 999998765433 3332 01256999999999999999999999999999999
Q ss_pred eEEEE--e---ec-------------cCCcEEEEEEecC----CCCEEEEEeCCC-----CEEeeC
Q 009597 493 KVFRT--L---KC-------------HEGVCIGCEWHPL----EQSKVATCGWDG-----LIKYWD 531 (531)
Q Consensus 493 ~~~~~--~---~~-------------h~~~V~~v~~~p~----~~~~l~t~s~Dg-----~I~iWD 531 (531)
+++.. + .. |...|.+++|++. ++.+|++|+.|. .|++||
T Consensus 244 ~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~ 309 (902)
T 2oaj_A 244 HMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMID 309 (902)
T ss_dssp CEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEE
T ss_pred cEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEe
Confidence 88764 2 12 3457999999752 235788887763 677774
No 104
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.9e-29 Score=252.43 Aligned_cols=228 Identities=12% Similarity=0.096 Sum_probs=181.5
Q ss_pred EEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECC---------CCc
Q 009597 291 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN---------TKE 361 (531)
Q Consensus 291 ~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~---------t~~ 361 (531)
.+.+++.+|++|+.||+|++||+.+++.+..+.. ..+..+.+++ . +++++.|++|++|+.. +++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~-~~v~~~~~~~-----~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTITT-PNPRTGGEHP-----A-IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEEE-ECCCTTCCCC-----S-EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEec-CCceeeeeCC-----c-eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 3456788999999999999999999998887762 1122222222 1 9999999999999665 555
Q ss_pred eeEEEc-ccCCCeeEEEEec--CCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEE
Q 009597 362 ITQEYD-QHLGAVNTITFVD--SNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQIL 438 (531)
Q Consensus 362 ~~~~~~-~h~~~I~~l~~sp--~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~ 438 (531)
.+..+. .|.+.|.+++|+| ++++|++++.||+|++||++++..+......+...+.+++|+|++.+|++|+.||.|+
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 555554 6778999999999 9999999999999999999999887666555677899999999999999999999999
Q ss_pred EEEcCCcceeceeeeecC-CccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec---cCCcEE--EEEEec
Q 009597 439 IYSTRERFQLNKKKRFAG-HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC---HEGVCI--GCEWHP 512 (531)
Q Consensus 439 iwd~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~---h~~~V~--~v~~~p 512 (531)
+||++++..+. ..+.+ | ...|.+++|+|+|.+|++++ ++.|++||+++++.+..+.. |...+. +++|+|
T Consensus 196 iwd~~~~~~~~--~~~~~~h--~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 196 VYNLSSPDQAS--SRFPVDE--EAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp EEESSCTTSCC--EECCCCT--TSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT
T ss_pred EEECCCCCCCc--cEEeccC--CCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECC
Confidence 99999875441 23444 5 36699999999999999999 45999999999877665543 333443 699999
Q ss_pred CCCCEEEEEeC-CCCEEeeC
Q 009597 513 LEQSKVATCGW-DGLIKYWD 531 (531)
Q Consensus 513 ~~~~~l~t~s~-Dg~I~iWD 531 (531)
++.+|++++. |+.|+||+
T Consensus 271 -~g~~l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 271 -SGKNMIAYSNESNSLTIYK 289 (343)
T ss_dssp -TSSEEEEEETTTTEEEEEE
T ss_pred -CCCEEEEecCCCCcEEEEE
Confidence 7889999998 99999995
No 105
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=5.1e-28 Score=244.08 Aligned_cols=252 Identities=19% Similarity=0.276 Sum_probs=199.2
Q ss_pred eeecccCeeeEEecCccCceEEEEEccC---CCEEEEEecCCeEEEEeCCC-CcEE-EEccC-CCcceEEEEccCCCCCc
Q 009597 268 DKSTFHGKCMRTYMGHSKAVRDISFCND---GTKFLTASYDKNIKYWDTET-GQVI-RTFST-GKIPYVVKLNPDDDKQN 341 (531)
Q Consensus 268 ~~~~~~~~~~~~l~gH~~~V~~l~fspd---g~~l~s~s~Dg~I~vWd~~t-~~~i-~~~~~-~~~~~~~~~~~~~~~~~ 341 (531)
.+.....+.+..+.+|.+.|++|+|+|+ |++|++|+.||.|+|||+.+ +..+ ..+.. ...+..+.|++ .+.
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~ 99 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD---DGS 99 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT---TSS
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc---CCC
Confidence 3445567788899999999999999998 69999999999999999987 5555 44432 33445566665 346
Q ss_pred EEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEE--ecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEE
Q 009597 342 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITF--VDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI 419 (531)
Q Consensus 342 ~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~--sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v 419 (531)
+|++++.||.|++||+.+++.+. +..|...|.+++| ++++++|++++.|+.|++||++++..+..+.. ...+.++
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~ 176 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL--PERCYCA 176 (368)
T ss_dssp EEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEEC--SSCEEEE
T ss_pred EEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEec--CCCceEE
Confidence 89999999999999999988776 5569999999999 88999999999999999999999887776653 2345555
Q ss_pred EEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCE----EEEEeCCCcEEEEECCCC---
Q 009597 420 SLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRF----VMSGDGEGKCWFWDWKSC--- 492 (531)
Q Consensus 420 ~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~----l~sgs~dg~I~iwd~~~~--- 492 (531)
.+. ...+++++.++.+.+|+++.......... ..+ .....++.+.++... +++++.||.|++||++..
T Consensus 177 ~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~ 251 (368)
T 3mmy_A 177 DVI--YPMAVVATAERGLIVYQLENQPSEFRRIE-SPL--KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA 251 (368)
T ss_dssp EEE--TTEEEEEEGGGCEEEEECSSSCEEEEECC-CSC--SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH
T ss_pred Eec--CCeeEEEeCCCcEEEEEeccccchhhhcc-ccc--cCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc
Confidence 554 56899999999999999987543221111 111 233445666555544 999999999999999987
Q ss_pred eEEEEeeccCC------------cEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 493 KVFRTLKCHEG------------VCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 493 ~~~~~~~~h~~------------~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
..+..+.+|.. .|.+++|+| ++.+|++++.||.|++||
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd 301 (368)
T 3mmy_A 252 KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWD 301 (368)
T ss_dssp HHSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEE
T ss_pred ccceeeeeeecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEE
Confidence 56777888876 699999999 778999999999999997
No 106
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1e-27 Score=247.27 Aligned_cols=241 Identities=14% Similarity=0.250 Sum_probs=197.7
Q ss_pred eeEEecCccCceE--EEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcc--eEEEEccCCCCCcEEEEeeCCCe
Q 009597 276 CMRTYMGHSKAVR--DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLAGMSDKK 351 (531)
Q Consensus 276 ~~~~l~gH~~~V~--~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~--~~~~~~~~~~~~~~l~sg~~dg~ 351 (531)
.+....+|...+. +++|+ +..+++++.|+.|+|||+.+++....+...+.. ..+.|++ .+.+|++|+.||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~---~~~~l~~~~~dg~ 157 (401)
T 4aez_A 83 RVLDAPGIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSH---DGSFLSVGLGNGL 157 (401)
T ss_dssp EEEECTTCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECT---TSSEEEEEETTSC
T ss_pred eeeeCCCCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECC---CCCEEEEECCCCe
Confidence 3445567877644 45555 456888999999999999999998888764444 4555555 3468999999999
Q ss_pred EEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCC-eEEEEeeCCCCCCccEEEEeCCCCEEEE
Q 009597 352 IVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP-VVIKYISEPHMHSMPSISLHPNTNWLAA 430 (531)
Q Consensus 352 I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~-~~~~~~~~~~~~~v~~v~~sp~~~~l~s 430 (531)
|++||+.+++.+..+..|...|.+++|+ +++|++++.||.|++||++.. ..+..+ ..|...|.+++|+|++.+|++
T Consensus 158 i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s 234 (401)
T 4aez_A 158 VDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTL-QGHSSEVCGLAWRSDGLQLAS 234 (401)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTSSEEEE
T ss_pred EEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEE-cCCCCCeeEEEEcCCCCEEEE
Confidence 9999999999999999999999999994 679999999999999999954 444444 458999999999999999999
Q ss_pred EEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCC-CEEEEEe--CCCcEEEEECCCCeEEEEeeccCCcEEE
Q 009597 431 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG-RFVMSGD--GEGKCWFWDWKSCKVFRTLKCHEGVCIG 507 (531)
Q Consensus 431 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~l~sgs--~dg~I~iwd~~~~~~~~~~~~h~~~V~~ 507 (531)
++.|+.|++||+++...+ ..+.+| ...+.+++|+|++ .++++|+ .|+.|++||+.+++++..+. |...|.+
T Consensus 235 ~~~d~~v~iwd~~~~~~~---~~~~~~--~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~ 308 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIPK---FTKTNH--NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTS 308 (401)
T ss_dssp EETTSCEEEEETTCSSEE---EEECCC--SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEE
T ss_pred EeCCCeEEEccCCCCCcc---EEecCC--cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEE
Confidence 999999999999986544 334455 3558889999976 4566654 79999999999999999887 6678999
Q ss_pred EEEecCCCCEEEEEe--CCCCEEeeC
Q 009597 508 CEWHPLEQSKVATCG--WDGLIKYWD 531 (531)
Q Consensus 508 v~~~p~~~~~l~t~s--~Dg~I~iWD 531 (531)
++|+| ++..|++++ .||.|++||
T Consensus 309 ~~~s~-~~~~l~~~~g~~dg~i~v~~ 333 (401)
T 4aez_A 309 LIWSP-HSKEIMSTHGFPDNNLSIWS 333 (401)
T ss_dssp EEECS-SSSEEEEEECTTTCEEEEEE
T ss_pred EEECC-CCCeEEEEeecCCCcEEEEe
Confidence 99999 777788744 899999997
No 107
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.1e-28 Score=245.32 Aligned_cols=244 Identities=20% Similarity=0.304 Sum_probs=198.7
Q ss_pred HHHhhhhccCCCCCCCceeeeeecc--cCeeeEEecCccCceEEEEEccC--CCEEEEEecCCeEEEEeCCCCc--EEEE
Q 009597 248 YAKKKEEKGNAGGEKGEHVEDKSTF--HGKCMRTYMGHSKAVRDISFCND--GTKFLTASYDKNIKYWDTETGQ--VIRT 321 (531)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~l~gH~~~V~~l~fspd--g~~l~s~s~Dg~I~vWd~~t~~--~i~~ 321 (531)
+++.+++..++.+..++.+.+|+.. .++++..+.+|...|++++|+++ +++|++|+.||.|+|||+.+++ .+..
T Consensus 17 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 96 (379)
T 3jrp_A 17 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV 96 (379)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeee
Confidence 3455667778888889999999987 77889999999999999999987 8999999999999999999987 5555
Q ss_pred ccC-CCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc--eeEEEcccCCCeeEEEEec-------------CCCEE
Q 009597 322 FST-GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE--ITQEYDQHLGAVNTITFVD-------------SNRRF 385 (531)
Q Consensus 322 ~~~-~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~--~~~~~~~h~~~I~~l~~sp-------------~~~~l 385 (531)
+.. ......+.+++... +.+|++++.|+.|++||++++. ....+..|...|.+++|+| ++.+|
T Consensus 97 ~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l 175 (379)
T 3jrp_A 97 HAVHSASVNSVQWAPHEY-GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 175 (379)
T ss_dssp ECCCSSCEEEEEECCGGG-CSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE
T ss_pred ecCCCcceEEEEeCCCCC-CCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE
Confidence 543 33445566665421 4689999999999999998873 4556778999999999999 69999
Q ss_pred EEEeCCCCEEEEEcCCCe---EEEEeeCCCCCCccEEEEeCC---CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCcc
Q 009597 386 VTSSDDKSLRVWEFGIPV---VIKYISEPHMHSMPSISLHPN---TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459 (531)
Q Consensus 386 ~s~s~Dg~I~iwd~~~~~---~~~~~~~~~~~~v~~v~~sp~---~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 459 (531)
++++.|+.|++||++.+. ........|...|.+++|+|+ +.+|++++.||.|++||++................
T Consensus 176 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 255 (379)
T 3jrp_A 176 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF 255 (379)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCC
T ss_pred EEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccC
Confidence 999999999999997653 222233458899999999999 89999999999999999988643222233333233
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 009597 460 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSC 492 (531)
Q Consensus 460 ~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~ 492 (531)
...+.+++|+|++++|++++.||.|++|++...
T Consensus 256 ~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 256 PDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp SSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 566999999999999999999999999998743
No 108
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=5.8e-28 Score=238.89 Aligned_cols=257 Identities=12% Similarity=0.087 Sum_probs=182.0
Q ss_pred ceeeeeecccC---eeeEEecCccCceEEEEEccCCCEEEEEecC--CeEEEEeC--C-C----CcEEEEccCCCcceEE
Q 009597 264 EHVEDKSTFHG---KCMRTYMGHSKAVRDISFCNDGTKFLTASYD--KNIKYWDT--E-T----GQVIRTFSTGKIPYVV 331 (531)
Q Consensus 264 ~~i~~~~~~~~---~~~~~l~gH~~~V~~l~fspdg~~l~s~s~D--g~I~vWd~--~-t----~~~i~~~~~~~~~~~~ 331 (531)
..|..|....+ ++++++.+|..+|..|.|.||..-|+..... ..-.++-+ . . ++.+.. .++...+.
T Consensus 63 ~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s--~g~~~~v~ 140 (356)
T 2w18_A 63 DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK--SGNIKAVL 140 (356)
T ss_dssp SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEE--EEEEEEEE
T ss_pred ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEe--CCCeEEEE
Confidence 46889999888 9999999999888888888753322222110 00011111 0 0 111111 11111122
Q ss_pred EEccCCCCCcEEEEee--CCCeEEEEEC-CCCceeEEEcccCCCeeEEEEec---CCCEEEEEeCCCCEEEEEcCCCeEE
Q 009597 332 KLNPDDDKQNILLAGM--SDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVD---SNRRFVTSSDDKSLRVWEFGIPVVI 405 (531)
Q Consensus 332 ~~~~~~~~~~~l~sg~--~dg~I~iwd~-~t~~~~~~~~~h~~~I~~l~~sp---~~~~l~s~s~Dg~I~iwd~~~~~~~ 405 (531)
.+ +.++++.+++ .|+.|++|++ .+++.+..+..|...+..++|++ ++.+|++++.|++|+|||+.+++.+
T Consensus 141 ~l----~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l 216 (356)
T 2w18_A 141 GL----TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL 216 (356)
T ss_dssp EE----TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEE
T ss_pred ec----CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEE
Confidence 22 2334555533 5999999999 55888899999999999999999 7799999999999999999999999
Q ss_pred EEeeCCC--CCCccEEEEeCCCCEE------------EEEEcCCeEEEEEcCCcceeceeee--ecCCccccceEEEEEc
Q 009597 406 KYISEPH--MHSMPSISLHPNTNWL------------AAQSLDNQILIYSTRERFQLNKKKR--FAGHIVAGYACQVNFS 469 (531)
Q Consensus 406 ~~~~~~~--~~~v~~v~~sp~~~~l------------~s~s~Dg~I~iwd~~~~~~~~~~~~--~~~~~~~~~v~~l~~s 469 (531)
+.+...+ ...+.+++|+|+|.++ ++|+.|++|++||..++..+..... ..+|.. .+.+..+
T Consensus 217 ~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~--~~lsg~~- 293 (356)
T 2w18_A 217 KKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG--RFLEGDV- 293 (356)
T ss_dssp EEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCC--CEEEEEE-
T ss_pred EEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc--eeEcccc-
Confidence 8886433 3467788999999886 5678899999999998865532211 134532 2333333
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEE-EEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 470 PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI-GCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 470 pdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~-~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++.++++|+.|++|+|||+.+++++.++.+|...+. .++|+| ++.+|++|+.|++|||||
T Consensus 294 -sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 294 -KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp -ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECS-SSSEEEEECTTSCEEEEE
T ss_pred -CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECC-CCCEEEEEECCCcEEEec
Confidence 488999999999999999999999999999987655 589999 888999999999999997
No 109
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=7.1e-28 Score=246.78 Aligned_cols=260 Identities=13% Similarity=0.142 Sum_probs=204.4
Q ss_pred eeeeecccCeeeEEecCccCceEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEEcc--------------CCCcceE
Q 009597 266 VEDKSTFHGKCMRTYMGHSKAVRDISFCN-DGTKFLTASYDKNIKYWDTETGQVIRTFS--------------TGKIPYV 330 (531)
Q Consensus 266 i~~~~~~~~~~~~~l~gH~~~V~~l~fsp-dg~~l~s~s~Dg~I~vWd~~t~~~i~~~~--------------~~~~~~~ 330 (531)
+++|+...++....+.+|.+.|++++|+| ++++|++|+.||.|+|||+.++.....+. +...+..
T Consensus 25 ~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 104 (408)
T 4a11_B 25 RRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVET 104 (408)
T ss_dssp HHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEE
T ss_pred ceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEE
Confidence 45666666788889999999999999999 99999999999999999999876554443 2333444
Q ss_pred EEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecC---CCEEEEEeCCCCEEEEEcCCCeEEEE
Q 009597 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS---NRRFVTSSDDKSLRVWEFGIPVVIKY 407 (531)
Q Consensus 331 ~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~---~~~l~s~s~Dg~I~iwd~~~~~~~~~ 407 (531)
+.|.+ ..+.+|++++.||.|++||+.+++.+..+. +...+.++.|++. +.++++++.|+.|++||++++..+..
T Consensus 105 ~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 181 (408)
T 4a11_B 105 VQWYP--HDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHI 181 (408)
T ss_dssp EEECT--TCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEE
T ss_pred EEEcc--CCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeee
Confidence 55544 344689999999999999999999888887 7788999999984 45999999999999999998877766
Q ss_pred eeCCCCCCccEEEEeCCCC-EEEEEEcCCeEEEEEcCCccee-cee------------eeecCCccccceEEEEEcCCCC
Q 009597 408 ISEPHMHSMPSISLHPNTN-WLAAQSLDNQILIYSTRERFQL-NKK------------KRFAGHIVAGYACQVNFSPDGR 473 (531)
Q Consensus 408 ~~~~~~~~v~~v~~sp~~~-~l~s~s~Dg~I~iwd~~~~~~~-~~~------------~~~~~~~~~~~v~~l~~spdg~ 473 (531)
+. .|...|.+++|+|++. +|++++.||.|++||++..... ... ....+| ...+.+++|+|+++
T Consensus 182 ~~-~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~ 258 (408)
T 4a11_B 182 LQ-GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAH--NGKVNGLCFTSDGL 258 (408)
T ss_dssp EC-CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSC--SSCEEEEEECTTSS
T ss_pred ec-CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccc--cCceeEEEEcCCCC
Confidence 65 4889999999999988 5899999999999999875421 111 111233 46699999999999
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEeeccCC----cEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 474 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEG----VCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 474 ~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~----~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+|++++.||.|++||+.+++....+..+.. ....+.+.......+++++.|+.|++||
T Consensus 259 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d 320 (408)
T 4a11_B 259 HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYT 320 (408)
T ss_dssp EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEE
T ss_pred EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEE
Confidence 999999999999999999877655433211 1112233333455677788899999997
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.3e-27 Score=248.63 Aligned_cols=238 Identities=16% Similarity=0.227 Sum_probs=194.5
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc---EEEEccCCC----------------------------------
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ---VIRTFSTGK---------------------------------- 326 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~---~i~~~~~~~---------------------------------- 326 (531)
..+|.+++|+++|++|+++ .++.|++||+.+++ .+..+....
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4589999999999966655 57899999999998 665554221
Q ss_pred ---------------------cceEEEEccCCCCCcEEEEeeCCCeEEEEECC--CCceeEEEc--ccCCCeeEEEEecC
Q 009597 327 ---------------------IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN--TKEITQEYD--QHLGAVNTITFVDS 381 (531)
Q Consensus 327 ---------------------~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~--t~~~~~~~~--~h~~~I~~l~~sp~ 381 (531)
.+.++.|++ +...++++|+.||.|++||+. +++.+..+. .|...|.+++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTS--DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp -----------------CCCCCEEEEEECT--TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcC--CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 133444444 333445899999999999999 888888886 56789999999999
Q ss_pred CCEEEEEeCCCCEEEEEcCCCeEEE----EeeCCCCCCccEEEEeCC---CCEEEEEEcCCeEEEEEcCCcceeceeeee
Q 009597 382 NRRFVTSSDDKSLRVWEFGIPVVIK----YISEPHMHSMPSISLHPN---TNWLAAQSLDNQILIYSTRERFQLNKKKRF 454 (531)
Q Consensus 382 ~~~l~s~s~Dg~I~iwd~~~~~~~~----~~~~~~~~~v~~v~~sp~---~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~ 454 (531)
+++|++++.+|.|++|++..+.... .+ ..|...|.+++|+|+ +++|++++.|+.|++||++++..+.. .+
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~--~~ 237 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPI-LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK--WL 237 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCS-EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE--EC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceee-ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee--ee
Confidence 9999999999999999998765432 22 347889999999999 99999999999999999988754422 13
Q ss_pred cCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecc-------------------------CCcEEEEE
Q 009597 455 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH-------------------------EGVCIGCE 509 (531)
Q Consensus 455 ~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h-------------------------~~~V~~v~ 509 (531)
.+| ...|.+++|+ ++.+|++|+.|+.|++||+.+++++..+..+ ...|.+++
T Consensus 238 ~~h--~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 238 FGH--KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp CCC--SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred cCC--CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 456 3569999999 9999999999999999999999998888743 34689999
Q ss_pred EecCCCCEEEEEe-CCCCEEeeC
Q 009597 510 WHPLEQSKVATCG-WDGLIKYWD 531 (531)
Q Consensus 510 ~~p~~~~~l~t~s-~Dg~I~iWD 531 (531)
|+| ++.+|++++ .|+.|+|||
T Consensus 315 ~~~-~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 315 KSK-NLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp ECS-SSSEEEEEETTCSEEEEEE
T ss_pred EeC-CCCEEEEEECCCCeEEEEE
Confidence 999 777888888 899999996
No 111
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=2.2e-27 Score=236.64 Aligned_cols=248 Identities=17% Similarity=0.239 Sum_probs=198.8
Q ss_pred HHHhhhhccCCCCCCCceeeeeecccC----eeeEEecCccCceEEEEEcc--CCCEEEEEecCCeEEEEeCCCC-----
Q 009597 248 YAKKKEEKGNAGGEKGEHVEDKSTFHG----KCMRTYMGHSKAVRDISFCN--DGTKFLTASYDKNIKYWDTETG----- 316 (531)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~l~gH~~~V~~l~fsp--dg~~l~s~s~Dg~I~vWd~~t~----- 316 (531)
+.+.+++..+++++.++.+++|+...+ +++..+.+|...|++++|+| ++++|++|+.||.|++||+.++
T Consensus 17 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~ 96 (351)
T 3f3f_A 17 VVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECS 96 (351)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTS
T ss_pred EEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccc
Confidence 445567778888899999999998766 67888999999999999999 6999999999999999999887
Q ss_pred ----cEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEc-------------ccCCCeeEEEE
Q 009597 317 ----QVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYD-------------QHLGAVNTITF 378 (531)
Q Consensus 317 ----~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~-------------~h~~~I~~l~~ 378 (531)
+.+..+..+ .....+.+.+.. .+.+|++++.||.|++||+++++.+..+. .|...+.+++|
T Consensus 97 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 97 GRRWNKLCTLNDSKGSLYSVKFAPAH-LGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp SCSEEEEEEECCCSSCEEEEEECCGG-GCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred ccCcceeeeecccCCceeEEEEcCCC-CCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 445555432 334555565541 14689999999999999998877554332 57889999999
Q ss_pred ecC---CCEEEEEeCCCCEEEEEcCCCeEE-EEeeCCCCCCccEEEEeCCC----CEEEEEEcCCeEEEEEcCCcce---
Q 009597 379 VDS---NRRFVTSSDDKSLRVWEFGIPVVI-KYISEPHMHSMPSISLHPNT----NWLAAQSLDNQILIYSTRERFQ--- 447 (531)
Q Consensus 379 sp~---~~~l~s~s~Dg~I~iwd~~~~~~~-~~~~~~~~~~v~~v~~sp~~----~~l~s~s~Dg~I~iwd~~~~~~--- 447 (531)
+|+ +.+|++++.|+.+.+|+....... ......|...|.+++|+|++ ++|++++.||.|++||++....
T Consensus 176 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 255 (351)
T 3f3f_A 176 CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLA 255 (351)
T ss_dssp CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----
T ss_pred ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccc
Confidence 997 899999999999988888776542 22234588999999999998 8999999999999999986421
Q ss_pred ----------------------------------------eceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEE
Q 009597 448 ----------------------------------------LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487 (531)
Q Consensus 448 ----------------------------------------~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iw 487 (531)
......+.+|. ..|.+++|+|++++|++|+.||.|+||
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~~~dg~v~iw 333 (351)
T 3f3f_A 256 SEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHN--GEVWSVSWNLTGTILSSAGDDGKVRLW 333 (351)
T ss_dssp -----------------------------------CCSEEEEEEEEECTTS--SCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred cCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccc--ccEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 12334455663 569999999999999999999999999
Q ss_pred ECCCCeEEEEe
Q 009597 488 DWKSCKVFRTL 498 (531)
Q Consensus 488 d~~~~~~~~~~ 498 (531)
|+.+++.+..+
T Consensus 334 ~~~~~~~~~~~ 344 (351)
T 3f3f_A 334 KATYSNEFKCM 344 (351)
T ss_dssp EECTTSCEEEE
T ss_pred ecCcCcchhhe
Confidence 99987554443
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2.5e-27 Score=244.19 Aligned_cols=240 Identities=13% Similarity=0.205 Sum_probs=190.7
Q ss_pred ceEEEEEccCCCEE-EEEecCCeEEEEeCCCCcE----EEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC
Q 009597 286 AVRDISFCNDGTKF-LTASYDKNIKYWDTETGQV----IRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK 360 (531)
Q Consensus 286 ~V~~l~fspdg~~l-~s~s~Dg~I~vWd~~t~~~----i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~ 360 (531)
....++++|+...+ ++++.||.|+||++..... +..+ .++...+..+.+.+..+.+|++|+.||.|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLV-CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCB-CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceE-ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 45568898876544 4578899999999965432 2223 2333334444443324479999999999999999987
Q ss_pred -------ceeEEEcccCCCeeEEEEecCC-CEEEEEeCCCCEEEEEcCCCeEEEEee-CCCCCCccEEEEeCCCCEEEEE
Q 009597 361 -------EITQEYDQHLGAVNTITFVDSN-RRFVTSSDDKSLRVWEFGIPVVIKYIS-EPHMHSMPSISLHPNTNWLAAQ 431 (531)
Q Consensus 361 -------~~~~~~~~h~~~I~~l~~sp~~-~~l~s~s~Dg~I~iwd~~~~~~~~~~~-~~~~~~v~~v~~sp~~~~l~s~ 431 (531)
+.+..+.+|...|.+++|+|++ ++|++++.|+.|++||++++..+..+. ..|...|.+++|+|++.+|+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 6788999999999999999998 699999999999999999998888774 5688999999999999999999
Q ss_pred EcCCeEEEEEcCCcceeceeeee-cCCccccceEEEEEcCCCCEEEEE---eCCCcEEEEECCCCeE-EEEee-ccCCcE
Q 009597 432 SLDNQILIYSTRERFQLNKKKRF-AGHIVAGYACQVNFSPDGRFVMSG---DGEGKCWFWDWKSCKV-FRTLK-CHEGVC 505 (531)
Q Consensus 432 s~Dg~I~iwd~~~~~~~~~~~~~-~~~~~~~~v~~l~~spdg~~l~sg---s~dg~I~iwd~~~~~~-~~~~~-~h~~~V 505 (531)
+.|+.|++||++++..+. .+ .+|. ...+.++.|+|++.+|++| +.|+.|++||+++++. +.... .|...|
T Consensus 195 ~~d~~i~iwd~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 270 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGTVVA---EKDRPHE-GTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGV 270 (402)
T ss_dssp ETTSEEEEEETTTTEEEE---EEECSSC-SSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSC
T ss_pred ecCCcEEEEeCCCCceee---eeccCCC-CCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCce
Confidence 999999999999876543 33 3443 2236779999999999999 7999999999998654 33333 567789
Q ss_pred EEEEEecCCCCEEE-EEeCCCCEEeeC
Q 009597 506 IGCEWHPLEQSKVA-TCGWDGLIKYWD 531 (531)
Q Consensus 506 ~~v~~~p~~~~~l~-t~s~Dg~I~iWD 531 (531)
.+++|+| ++.+|+ +++.||.|++||
T Consensus 271 ~~~~~s~-~~~~l~~~g~~dg~i~i~d 296 (402)
T 2aq5_A 271 LLPFFDP-DTNIVYLCGKGDSSIRYFE 296 (402)
T ss_dssp EEEEEET-TTTEEEEEETTCSCEEEEE
T ss_pred eEEEEcC-CCCEEEEEEcCCCeEEEEE
Confidence 9999999 566665 555799999996
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.1e-26 Score=241.02 Aligned_cols=268 Identities=15% Similarity=0.160 Sum_probs=219.1
Q ss_pred hhhhccCCCCCCCceeeeeecccCeeeE-----EecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccC-
Q 009597 251 KKEEKGNAGGEKGEHVEDKSTFHGKCMR-----TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST- 324 (531)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~- 324 (531)
.+.+.+.+++..++.+.+|+..+++.++ .+.+|...|.+++|+++++++++++.|+.|++||+.+++.+..+..
T Consensus 131 s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~ 210 (433)
T 3bws_A 131 IDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLT 210 (433)
T ss_dssp SSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS
T ss_pred eCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCC
Confidence 3344566667778889999999999888 5668999999999999999999999999999999999999888863
Q ss_pred CCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEe--------CCCCEEE
Q 009597 325 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS--------DDKSLRV 396 (531)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s--------~Dg~I~i 396 (531)
...+..+.+.++. ..++++++.++.|++||+++++.+..+..+ ..+.+++|+|++++|++++ .|+.|++
T Consensus 211 ~~~~~~~~~~~~~--~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~ 287 (433)
T 3bws_A 211 GKWSKILLYDPIR--DLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGI 287 (433)
T ss_dssp SSSEEEEEEETTT--TEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEE
T ss_pred CCCeeEEEEcCCC--CEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEE
Confidence 3345566666543 345567778999999999999988888765 5699999999999999888 5889999
Q ss_pred EEcCCCeEEEEeeCCCCCCccEEEEeCCCCEE-EEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEE
Q 009597 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWL-AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 475 (531)
Q Consensus 397 wd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l-~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l 475 (531)
||+.++..+..+. +...+.+++|+|+++.+ ++++.++.|++||+.++..+... . + ...+.+++|+|+|++|
T Consensus 288 ~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~---~-~--~~~~~~~~~s~dg~~l 359 (433)
T 3bws_A 288 YSMDKEKLIDTIG--PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSI---P-V--FDKPNTIALSPDGKYL 359 (433)
T ss_dssp EETTTTEEEEEEE--EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEE---E-C--SSSEEEEEECTTSSEE
T ss_pred EECCCCcEEeecc--CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEe---c-C--CCCCCeEEEcCCCCEE
Confidence 9999988776653 45578899999999755 56688999999999877554332 2 2 2447789999999999
Q ss_pred EEEeC---------------CCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEe-CCCCEEeeC
Q 009597 476 MSGDG---------------EGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYWD 531 (531)
Q Consensus 476 ~sgs~---------------dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s-~Dg~I~iWD 531 (531)
++++. ||.|++||+.+++.+..+..+ ..+.+++|+| ++.+|++++ .|+.|++||
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 360 YVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSP-DNRYLVISDFLDHQIRVYR 429 (433)
T ss_dssp EEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECT-TSCEEEEEETTTTEEEEEE
T ss_pred EEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcC-CCCEEEEEECCCCeEEEEE
Confidence 88876 579999999999999988864 5689999999 677777766 499999996
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-27 Score=251.39 Aligned_cols=258 Identities=9% Similarity=0.021 Sum_probs=200.2
Q ss_pred HHHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC
Q 009597 246 EEYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG 325 (531)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~ 325 (531)
..+.++++++.+++++.+++++ + ++....+.+|...|.+++|+|+| .++.+.+|+.+.. .+..+...
T Consensus 19 ~sv~~SpDG~~iASas~D~TV~--d---~~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~~~~~~~~ 85 (588)
T 2j04_A 19 NNLTWARDGTLYLTTFPDISIG--Q---PKYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN-GLLNSQPV 85 (588)
T ss_dssp CCEEECTTSCEEEECSSSEEEE--E---ECCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-CSSTTSCS
T ss_pred EEEEECCCCCEEEEEcCCceee--c---ccccceecCCCccEEEEEECCCC-------CcceEEEEeCCCc-eEeecCCC
Confidence 3456889999999999999999 3 33444558999999999999999 4555555554322 22232333
Q ss_pred CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCC-----CeeEEEEecCCCEEEEEeCCCCEEEEEcC
Q 009597 326 KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLG-----AVNTITFVDSNRRFVTSSDDKSLRVWEFG 400 (531)
Q Consensus 326 ~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~-----~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~ 400 (531)
..+..+.|+|+ +.+|++++.||.|++||..+ ++..+. |.. .|.+++|+|+|++|++|+.||+|+|||+.
T Consensus 86 ~~V~~vawSPd---G~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 86 CYPRVCKPSPI---DDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp CCEEEEEECSS---SSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CcEEEEEECCC---CCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 34455555553 36799999999999999644 666677 665 49999999999999999999999999998
Q ss_pred CCe-------EEEEee---CCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeee-cCCccccceEEEEEc
Q 009597 401 IPV-------VIKYIS---EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF-AGHIVAGYACQVNFS 469 (531)
Q Consensus 401 ~~~-------~~~~~~---~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~-~~~~~~~~v~~l~~s 469 (531)
.+. .+..+. .+|...|.+++|+|+| +++++.|++|++|++..+........+ .+|. ..|.+++|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~--~~V~svaFs 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASR--RKITDLKIV 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCS--SCCCCEEEE
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeeccccc--CcEEEEEEE
Confidence 874 345542 4578899999999999 889999999999999876532122334 2453 458889999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEE--ecCCCCEEEEEeCCCCEEeeC
Q 009597 470 PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW--HPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 470 pdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~--~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|++|++++ ++.|++||+.+++......+|...|..++| +| ++..|++++.||+ ++|.
T Consensus 236 --g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~-d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 236 --DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEK-ESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp --TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCS-SCEEEEECSSCEE-EEEE
T ss_pred --CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCC-CCCEEEEEcCCCC-EEEe
Confidence 68999887 699999999998885444489999999999 98 7788999999999 8883
No 115
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=2.8e-26 Score=233.95 Aligned_cols=225 Identities=12% Similarity=0.044 Sum_probs=176.8
Q ss_pred CCCCCceeeeeecccCe----eeEEe-----cCccCceEEEEEccCCCEEEEE--ecCCeEEEEeCCCCcEEEEccCCCc
Q 009597 259 GGEKGEHVEDKSTFHGK----CMRTY-----MGHSKAVRDISFCNDGTKFLTA--SYDKNIKYWDTETGQVIRTFSTGKI 327 (531)
Q Consensus 259 ~~~~~~~i~~~~~~~~~----~~~~l-----~gH~~~V~~l~fspdg~~l~s~--s~Dg~I~vWd~~t~~~i~~~~~~~~ 327 (531)
.+..++.++.|...... .+... ..+...+++++|+|||++|+++ +.|++|+|||+.+++++..+.....
T Consensus 99 s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~ 178 (365)
T 4h5i_A 99 QGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGE 178 (365)
T ss_dssp HTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSC
T ss_pred EecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCc
Confidence 45566778887654332 22222 2345569999999999998755 4789999999999999999988777
Q ss_pred ceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEE--EcccCCCeeEEEEecCCCEEEEEeCCC----CEEEEEcCC
Q 009597 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE--YDQHLGAVNTITFVDSNRRFVTSSDDK----SLRVWEFGI 401 (531)
Q Consensus 328 ~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~--~~~h~~~I~~l~~sp~~~~l~s~s~Dg----~I~iwd~~~ 401 (531)
+..+.|++++ .++++++ ++.+++|+..++..+.. ...|...|.+++|+|+++++++++.|+ .+++|++..
T Consensus 179 V~~v~fspdg---~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~ 254 (365)
T 4h5i_A 179 VKDLHFSTDG---KVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKS 254 (365)
T ss_dssp CCEEEECTTS---SEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET
T ss_pred eEEEEEccCC---ceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccc
Confidence 8888888754 5677776 55677777777766543 356888999999999999999999887 588899877
Q ss_pred CeEEE---EeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEE
Q 009597 402 PVVIK---YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG 478 (531)
Q Consensus 402 ~~~~~---~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sg 478 (531)
..... .....|...|++++|+|+|++|++|+.|++|+|||+.++..+.. .+.+|. ..|++++|+|||++|++|
T Consensus 255 ~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~--~~~gH~--~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 255 GNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKI--FKQAHS--FAITEVTISPDSTYVASV 330 (365)
T ss_dssp TEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE--ETTSSS--SCEEEEEECTTSCEEEEE
T ss_pred ceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEE--ecCccc--CCEEEEEECCCCCEEEEE
Confidence 64321 12235888999999999999999999999999999998765422 245674 569999999999999999
Q ss_pred eCCCcEEEEECCC
Q 009597 479 DGEGKCWFWDWKS 491 (531)
Q Consensus 479 s~dg~I~iwd~~~ 491 (531)
+.|++|+|||+..
T Consensus 331 S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 331 SAANTIHIIKLPL 343 (365)
T ss_dssp ETTSEEEEEECCT
T ss_pred eCCCeEEEEEcCC
Confidence 9999999999864
No 116
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=4.1e-27 Score=242.54 Aligned_cols=247 Identities=10% Similarity=0.053 Sum_probs=175.0
Q ss_pred EecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEc----cCCC--cceEEEEccC-----CCCCcEEEEee
Q 009597 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF----STGK--IPYVVKLNPD-----DDKQNILLAGM 347 (531)
Q Consensus 279 ~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~----~~~~--~~~~~~~~~~-----~~~~~~l~sg~ 347 (531)
....|...+....+.+++.+|++|+.|++|+|||+.++++.... ..+| .+..+.|++. ...+++|++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 84 SENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp ECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred cccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 34456666666667778889999999999999999988765321 1233 3455666652 22457999999
Q ss_pred CCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCC-EEEEEeCCCCEEEEEcCCCeEEEEe------------------
Q 009597 348 SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNR-RFVTSSDDKSLRVWEFGIPVVIKYI------------------ 408 (531)
Q Consensus 348 ~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~------------------ 408 (531)
.|++|+|||++++..+..+..|..+|.+++|+|++. +|++++.|++|++||++++......
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 999999999999988888888999999999999874 7999999999999999876543221
Q ss_pred ------eCCCCCCccEEEEe-CCCCEEEEEEcCCeEEEEEcCCcceeceeeeec-------------CCccccceEEEEE
Q 009597 409 ------SEPHMHSMPSISLH-PNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA-------------GHIVAGYACQVNF 468 (531)
Q Consensus 409 ------~~~~~~~v~~v~~s-p~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~-------------~~~~~~~v~~l~~ 468 (531)
...|...+.++.|+ |++..|++++.|++|++||+........+.... ............|
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACP 323 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEE
T ss_pred ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEE
Confidence 12466778899987 799999999999999999997754332211100 0000111222334
Q ss_pred cC--CCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCC
Q 009597 469 SP--DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGL 526 (531)
Q Consensus 469 sp--dg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~ 526 (531)
+| ++.++++|+.||.|+|||+.+++++..+..|..+|.+++|+| ++++||+++.||.
T Consensus 324 ~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafsp-dG~~LA~as~~Gv 382 (393)
T 4gq1_A 324 HPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQ-DGSHLAIATEGSV 382 (393)
T ss_dssp CSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECT-TSSEEEEEESSEE
T ss_pred ccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcC-CCCEEEEEeCCCe
Confidence 44 455778888999999999999999888889999999999999 8889999998875
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=3.4e-26 Score=238.38 Aligned_cols=239 Identities=16% Similarity=0.224 Sum_probs=193.5
Q ss_pred HHHhhh-hccCCCCCCCceeeeeeccc----------CeeeEEecCccCceEEEEEccCCC-EEEEEecCCeEEEEeCCC
Q 009597 248 YAKKKE-EKGNAGGEKGEHVEDKSTFH----------GKCMRTYMGHSKAVRDISFCNDGT-KFLTASYDKNIKYWDTET 315 (531)
Q Consensus 248 ~~~~~~-~~~~~~~~~~~~i~~~~~~~----------~~~~~~l~gH~~~V~~l~fspdg~-~l~s~s~Dg~I~vWd~~t 315 (531)
++..+. ..+++++..++.|.+|+... .+.+..+.+|...|.+|+|+|++. +|++|+.||.|+||++.+
T Consensus 134 l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 213 (430)
T 2xyi_A 134 ARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINA 213 (430)
T ss_dssp EEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTS
T ss_pred EEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCC
Confidence 344454 56788888899999999876 688999999999999999999988 999999999999999987
Q ss_pred CcE-------EEEcc-CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC---ceeEEEcccCCCeeEEEEecCCC-
Q 009597 316 GQV-------IRTFS-TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK---EITQEYDQHLGAVNTITFVDSNR- 383 (531)
Q Consensus 316 ~~~-------i~~~~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~---~~~~~~~~h~~~I~~l~~sp~~~- 383 (531)
+.. ...+. +...+..+.+++ ....+|++++.||.|++||++++ ..+..+..|...|++++|+|++.
T Consensus 214 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p--~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 291 (430)
T 2xyi_A 214 TPKEHRVIDAKNIFTGHTAVVEDVAWHL--LHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEF 291 (430)
T ss_dssp CCBGGGEEECSEEECCCSSCEEEEEECS--SCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTT
T ss_pred CCCCCceeccceeecCCCCCEeeeEEeC--CCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCC
Confidence 422 23332 222344555555 34579999999999999999987 57888889999999999999887
Q ss_pred EEEEEeCCCCEEEEEcCCC-eEEEEeeCCCCCCccEEEEeCCCC-EEEEEEcCCeEEEEEcCCcce-----------ece
Q 009597 384 RFVTSSDDKSLRVWEFGIP-VVIKYISEPHMHSMPSISLHPNTN-WLAAQSLDNQILIYSTRERFQ-----------LNK 450 (531)
Q Consensus 384 ~l~s~s~Dg~I~iwd~~~~-~~~~~~~~~~~~~v~~v~~sp~~~-~l~s~s~Dg~I~iwd~~~~~~-----------~~~ 450 (531)
+|++|+.||.|++||++.. ..+..+. .|...|.+++|+|++. +|++++.|+.|+|||+..... ...
T Consensus 292 ~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 370 (430)
T 2xyi_A 292 ILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 370 (430)
T ss_dssp EEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTE
T ss_pred EEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcce
Confidence 6889999999999999984 4444444 4889999999999885 699999999999999986321 123
Q ss_pred eeeecCCccccceEEEEEcCCCC-EEEEEeCCCcEEEEECCC
Q 009597 451 KKRFAGHIVAGYACQVNFSPDGR-FVMSGDGEGKCWFWDWKS 491 (531)
Q Consensus 451 ~~~~~~~~~~~~v~~l~~spdg~-~l~sgs~dg~I~iwd~~~ 491 (531)
+..+.+| ...|.+++|+|++. +|++++.||.|+||++..
T Consensus 371 ~~~~~~h--~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 371 LFIHGGH--TAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEECCCC--SSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EEEcCCC--CCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 3445555 35699999999999 899999999999999864
No 118
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3e-26 Score=255.81 Aligned_cols=241 Identities=20% Similarity=0.316 Sum_probs=196.9
Q ss_pred HHhhhhccCCCCCCCceeeeeecc--cCeeeEEecCccCceEEEEEccC--CCEEEEEecCCeEEEEeCCCCc--EEEEc
Q 009597 249 AKKKEEKGNAGGEKGEHVEDKSTF--HGKCMRTYMGHSKAVRDISFCND--GTKFLTASYDKNIKYWDTETGQ--VIRTF 322 (531)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~l~gH~~~V~~l~fspd--g~~l~s~s~Dg~I~vWd~~t~~--~i~~~ 322 (531)
.+.+++..+++++.++.|.+|+.. .++++.++.+|.++|++++|+++ +++|++|+.||.|++||+.+++ .+..+
T Consensus 16 ~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~ 95 (753)
T 3jro_A 16 VLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVH 95 (753)
T ss_dssp CCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred EECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccc
Confidence 345667778888899999999987 67889999999999999999988 9999999999999999999986 45554
Q ss_pred c-CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC--ceeEEEcccCCCeeEEEEec-------------CCCEEE
Q 009597 323 S-TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVD-------------SNRRFV 386 (531)
Q Consensus 323 ~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~--~~~~~~~~h~~~I~~l~~sp-------------~~~~l~ 386 (531)
. +...+.++.+++... +.++++|+.||.|++||++++ .....+..|...|.++.|+| ++.+|+
T Consensus 96 ~~h~~~V~~v~~sp~~~-~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~ 174 (753)
T 3jro_A 96 AVHSASVNSVQWAPHEY-GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV 174 (753)
T ss_dssp CCCSSCEEEEEECCGGG-CSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEE
T ss_pred cCCCCCeEEEEECCCCC-CCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEE
Confidence 3 233445566665421 478999999999999999877 34566788999999999999 589999
Q ss_pred EEeCCCCEEEEEcCCC----eEEEEeeCCCCCCccEEEEeCC---CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCcc
Q 009597 387 TSSDDKSLRVWEFGIP----VVIKYISEPHMHSMPSISLHPN---TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 459 (531)
Q Consensus 387 s~s~Dg~I~iwd~~~~----~~~~~~~~~~~~~v~~v~~sp~---~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 459 (531)
+|+.||.|++||++.+ .....+ ..|...|.+++|+|+ +.+|++++.||.|++||++++..............
T Consensus 175 sgs~dg~I~iwd~~~~~~~~~~~~~~-~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 253 (753)
T 3jro_A 175 TGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF 253 (753)
T ss_dssp EEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCC
T ss_pred EEECCCeEEEEeccCCcccceeeeee-cCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCC
Confidence 9999999999999876 333333 468999999999999 99999999999999999987642222222222223
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 009597 460 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 491 (531)
Q Consensus 460 ~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~ 491 (531)
...+.+++|+|+|.+|++|+.||.|++||+..
T Consensus 254 ~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 254 PDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 45688899999999999999999999999874
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.2e-25 Score=228.23 Aligned_cols=265 Identities=11% Similarity=0.113 Sum_probs=199.5
Q ss_pred HHHHHhhhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEE-EEEecCCeEEEEeCCCCcEEEEccC
Q 009597 246 EEYAKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKF-LTASYDKNIKYWDTETGQVIRTFST 324 (531)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l-~s~s~Dg~I~vWd~~t~~~i~~~~~ 324 (531)
.+++.++++..++.+..++ +++|+...++.+..... ..+..+++.++++.+ ++++.|++|+|||+.+++++..+..
T Consensus 23 ~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~ 99 (355)
T 3vu4_A 23 TDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKV 99 (355)
T ss_dssp CEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEEC
Confidence 3455677788888777665 57898877776655433 358889999988877 5677889999999999999999876
Q ss_pred CCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC-ceeEEEcccCCCeeEEEEecCCCEEEE--EeCCCCEEEEEcCC
Q 009597 325 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK-EITQEYDQHLGAVNTITFVDSNRRFVT--SSDDKSLRVWEFGI 401 (531)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~-~~~~~~~~h~~~I~~l~~sp~~~~l~s--~s~Dg~I~iwd~~~ 401 (531)
......+.+.+ ..++++ .++.|++||+.++ +.+..+.. +...+++++ .++++ ++.||.|++||+.+
T Consensus 100 ~~~v~~v~~~~-----~~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~ 168 (355)
T 3vu4_A 100 DAPVKDLFLSR-----EFIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQS 168 (355)
T ss_dssp SSCEEEEEECS-----SEEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC
T ss_pred CCceEEEEEcC-----CEEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCC
Confidence 66555555543 234443 4889999999988 66665554 445566777 56666 57899999999987
Q ss_pred Ce---------------E-EEEeeCCCCCCccEEEEeCCCCEEEEEEcCCe-EEEEEcCCcceeceeeeec-C-Cccccc
Q 009597 402 PV---------------V-IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQ-ILIYSTRERFQLNKKKRFA-G-HIVAGY 462 (531)
Q Consensus 402 ~~---------------~-~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~-I~iwd~~~~~~~~~~~~~~-~-~~~~~~ 462 (531)
+. + +..+ ..|...|.+++|+|++++|++++.|++ |+|||++++..+ ..+. + | ...
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~---~~~~~g~h--~~~ 242 (355)
T 3vu4_A 169 SGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV---REFRRGLD--RAD 242 (355)
T ss_dssp ------------------CCEEE-CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEE---EEEECTTC--CSC
T ss_pred CCccccccccccccccCcccEEE-EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE---EEEEcCCC--CCc
Confidence 64 1 3333 469999999999999999999999998 999999987655 3344 3 5 356
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE--EEEe--------------------e-ccCCcEEEEEEecCCCCEEE
Q 009597 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV--FRTL--------------------K-CHEGVCIGCEWHPLEQSKVA 519 (531)
Q Consensus 463 v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~--~~~~--------------------~-~h~~~V~~v~~~p~~~~~l~ 519 (531)
|.+++|+|+|++|++++.|+.|+|||+..... ...+ . .+......++|++ ++.+|+
T Consensus 243 v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-d~~~l~ 321 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWIS-ESSLVV 321 (355)
T ss_dssp EEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESS-SSEEEE
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeC-CCCEEE
Confidence 99999999999999999999999999976431 1111 1 1112235689999 788999
Q ss_pred EEeCCCCEEeeC
Q 009597 520 TCGWDGLIKYWD 531 (531)
Q Consensus 520 t~s~Dg~I~iWD 531 (531)
+++.||.+++|+
T Consensus 322 ~~~~dg~~~~~~ 333 (355)
T 3vu4_A 322 VWPHTRMIETFK 333 (355)
T ss_dssp EETTTTEEEEEE
T ss_pred EEeCCCeEEEEE
Confidence 999999999985
No 120
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.94 E-value=9.3e-25 Score=226.61 Aligned_cols=235 Identities=14% Similarity=0.255 Sum_probs=189.4
Q ss_pred ceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-Cc--ceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCce
Q 009597 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KI--PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI 362 (531)
Q Consensus 286 ~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~--~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~ 362 (531)
.+..|+|+++ ++|++| .|++|+|||..+++++..+... +. +.++.|+++ +.+|++|+.||.|++||+.+++.
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspd---g~~lasgs~Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE---GNYLAVGTSSAEVQLWDVQQQKR 181 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT---SSEEEEEETTSCEEEEETTTTEE
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCC---CCEEEEEECCCeEEEEEcCCCcE
Confidence 4678999975 466665 4999999999999998877643 23 455666553 46899999999999999999999
Q ss_pred eEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEc
Q 009597 363 TQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 442 (531)
Q Consensus 363 ~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~ 442 (531)
+..+.+|...+.++.++ +..|++|+.|+.+++||.............|...+..+.++|++.++++++.|+.|++|+.
T Consensus 182 ~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 182 LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEee
Confidence 99999999999998875 6799999999999999998765544444569999999999999999999999999999999
Q ss_pred CCcceec-eeeeecCCccccceEEEEEcCCCC-EEEE--EeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEE
Q 009597 443 RERFQLN-KKKRFAGHIVAGYACQVNFSPDGR-FVMS--GDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518 (531)
Q Consensus 443 ~~~~~~~-~~~~~~~~~~~~~v~~l~~spdg~-~l~s--gs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 518 (531)
..+.... .......| ...|.+++|+|.+. ++++ |+.|+.|+|||+.+++++..+..|. .+.++.|+| ++..+
T Consensus 260 ~~~~~~~~~~~~~~~~--~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~~-~~~~l 335 (420)
T 4gga_A 260 APGEGGWVPLQTFTQH--QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSP-HYKEL 335 (420)
T ss_dssp SCCSSCSCCSEEECCC--SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEET-TTTEE
T ss_pred ccccccceeeeeeccc--CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc-ceeeeeecC-CCCeE
Confidence 8754322 22334445 35688999999654 5554 4579999999999999999988654 578999999 55555
Q ss_pred EEEe--CCCCEEeeC
Q 009597 519 ATCG--WDGLIKYWD 531 (531)
Q Consensus 519 ~t~s--~Dg~I~iWD 531 (531)
++++ .||.|+|||
T Consensus 336 v~~sg~~d~~I~iwd 350 (420)
T 4gga_A 336 ISGHGFAQNQLVIWK 350 (420)
T ss_dssp EEEECTTTCCEEEEE
T ss_pred EEEEecCCCEEEEEE
Confidence 5544 699999997
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=2.7e-24 Score=212.77 Aligned_cols=234 Identities=14% Similarity=0.246 Sum_probs=185.8
Q ss_pred eEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-Cc--ceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCcee
Q 009597 287 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KI--PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT 363 (531)
Q Consensus 287 V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~--~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~ 363 (531)
+.+|+||+++ +|++| .|++|+|||+.+++++..+..+ +. +.++.+.+. +++|++|+.||.|++||+++++.+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~---~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE---GNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT---SSEEEEEETTSEEEEEETTTTEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCC---CCEEEEEECCCcEEEeecCCceeE
Confidence 5779999876 56655 5999999999999999888643 33 345555553 468999999999999999999999
Q ss_pred EEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcC
Q 009597 364 QEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443 (531)
Q Consensus 364 ~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~ 443 (531)
..+.+|...+.++.+ ++..+++++.++.+++|+.............|...+..+.+++++++|++++.|+.|++||++
T Consensus 103 ~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 103 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 999999998887665 567999999999999999988755544445689999999999999999999999999999998
Q ss_pred Ccceecee-eeecCCccccceEEEEEcCCCCEE---EEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEE
Q 009597 444 ERFQLNKK-KRFAGHIVAGYACQVNFSPDGRFV---MSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVA 519 (531)
Q Consensus 444 ~~~~~~~~-~~~~~~~~~~~v~~l~~spdg~~l---~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~ 519 (531)
++...... .....+ .+.+..+.++|++..+ ++++.++.|++||........... |...+..+.|+| .+..++
T Consensus 181 ~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~~~ 256 (318)
T 4ggc_A 181 PGEGGWVPLQTFTQH--QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSP-HYKELI 256 (318)
T ss_dssp CBTTBSCCSEEECCC--CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEET-TTTEEE
T ss_pred CCcccccceeeeccc--CCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecc-cccceE
Confidence 76543222 222233 3558889999976533 466788999999999988777655 667789999999 555555
Q ss_pred EEe--CCCCEEeeC
Q 009597 520 TCG--WDGLIKYWD 531 (531)
Q Consensus 520 t~s--~Dg~I~iWD 531 (531)
+++ .||.|+|||
T Consensus 257 ~~sg~~d~~i~iwd 270 (318)
T 4ggc_A 257 SGHGFAQNQLVIWK 270 (318)
T ss_dssp EEECTTTCCEEEEE
T ss_pred EEEEcCCCEEEEEE
Confidence 443 799999997
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=5.8e-24 Score=217.48 Aligned_cols=244 Identities=16% Similarity=0.167 Sum_probs=200.4
Q ss_pred HHhhhhccC-CCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEE-EecCCeEEEEeCCCCcEEEEccCCC
Q 009597 249 AKKKEEKGN-AGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLT-ASYDKNIKYWDTETGQVIRTFSTGK 326 (531)
Q Consensus 249 ~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s-~s~Dg~I~vWd~~t~~~i~~~~~~~ 326 (531)
...++++.+ +++..++.+.+|+..+++++..+..|. .|.+++|+|++++|+. ++.++.|++||+.+++.+..+..+.
T Consensus 38 ~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~ 116 (391)
T 1l0q_A 38 VISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK 116 (391)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred EECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC
Confidence 344555433 556677899999999999999998776 8999999999998754 5567999999999999999888777
Q ss_pred cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEE-EEEeCCCCEEEEEcCCCeEE
Q 009597 327 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF-VTSSDDKSLRVWEFGIPVVI 405 (531)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l-~s~s~Dg~I~iwd~~~~~~~ 405 (531)
.+..+.++++. ..++++++.++.|++||+.+++.+..+..| ..+.+++|+|+++++ ++++.++.|++||++++..+
T Consensus 117 ~~~~~~~s~dg--~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 117 SPLGLALSPDG--KKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI 193 (391)
T ss_dssp SEEEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CcceEEECCCC--CEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 77777777643 345588889999999999999998888766 556999999999887 57778899999999999887
Q ss_pred EEeeCCCCCCccEEEEeCCCCEEEEEE---cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEE-EEEeCC
Q 009597 406 KYISEPHMHSMPSISLHPNTNWLAAQS---LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV-MSGDGE 481 (531)
Q Consensus 406 ~~~~~~~~~~v~~v~~sp~~~~l~s~s---~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l-~sgs~d 481 (531)
..+. +...+.+++|+|++++|++++ .++.|++||+.++..+. .+..+ ..+.+++|+|+|++| ++++.|
T Consensus 194 ~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~---~~~~~---~~~~~~~~s~dg~~l~~s~~~d 265 (391)
T 1l0q_A 194 DTVK--VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITA---RIPVG---PDPAGIAVTPDGKKVYVALSFX 265 (391)
T ss_dssp EEEE--CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEE---EEECC---SSEEEEEECTTSSEEEEEETTT
T ss_pred EEEe--cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEE---EEecC---CCccEEEEccCCCEEEEEcCCC
Confidence 7765 456789999999999999988 68999999998875543 33333 236779999999987 567889
Q ss_pred CcEEEEECCCCeEEEEeeccCCc
Q 009597 482 GKCWFWDWKSCKVFRTLKCHEGV 504 (531)
Q Consensus 482 g~I~iwd~~~~~~~~~~~~h~~~ 504 (531)
+.|++||+.+++++..+..|..+
T Consensus 266 ~~v~v~d~~~~~~~~~~~~~~~~ 288 (391)
T 1l0q_A 266 NTVSVIDTATNTITATMAVGKNP 288 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSSE
T ss_pred CEEEEEECCCCcEEEEEECCcCC
Confidence 99999999999999998877654
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=1.1e-23 Score=218.58 Aligned_cols=253 Identities=12% Similarity=0.080 Sum_probs=201.8
Q ss_pred eeeeeecccC--eeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccC----CC--cceEEEEccC
Q 009597 265 HVEDKSTFHG--KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST----GK--IPYVVKLNPD 336 (531)
Q Consensus 265 ~i~~~~~~~~--~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~----~~--~~~~~~~~~~ 336 (531)
.++.++...+ +.+..+..|. .+.+++|+|++.++++++.|+.|++||+.+++.+..+.. .+ .+..+.+.+
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~- 179 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE- 179 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-
T ss_pred EEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-
Confidence 4555555334 6677777664 466999999887888888899999999999998875432 22 234455543
Q ss_pred CCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEE-eCCCCEEEEEcCCCeEEEEeeCCCCCC
Q 009597 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS-SDDKSLRVWEFGIPVVIKYISEPHMHS 415 (531)
Q Consensus 337 ~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~-s~Dg~I~iwd~~~~~~~~~~~~~~~~~ 415 (531)
.+.++++++.|+.|++||+.+++.+..+..|...+.+++|+|++++++++ +.|+.|++||++++..+..+. ....
T Consensus 180 --~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~ 255 (433)
T 3bws_A 180 --HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD--KIGL 255 (433)
T ss_dssp --GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC--CCSE
T ss_pred --CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec--CCCC
Confidence 34789999999999999999999999999999999999999999988554 479999999999998877664 3456
Q ss_pred ccEEEEeCCCCEEEEEE--------cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEE-EEEeCCCcEEE
Q 009597 416 MPSISLHPNTNWLAAQS--------LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV-MSGDGEGKCWF 486 (531)
Q Consensus 416 v~~v~~sp~~~~l~s~s--------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l-~sgs~dg~I~i 486 (531)
+.+++|+|++++|++++ .|+.|++||+.++..+... .+ ...+.+++|+|++++| ++++.++.|++
T Consensus 256 ~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~----~~--~~~~~~~~~~~~g~~l~~~~~~~~~v~v 329 (433)
T 3bws_A 256 PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI----GP--PGNKRHIVSGNTENKIYVSDMCCSKIEV 329 (433)
T ss_dssp EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE----EE--EECEEEEEECSSTTEEEEEETTTTEEEE
T ss_pred ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec----cC--CCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 89999999999999988 4889999999887544322 12 2357789999999755 56689999999
Q ss_pred EECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeC---------------CCCEEeeC
Q 009597 487 WDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW---------------DGLIKYWD 531 (531)
Q Consensus 487 wd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~---------------Dg~I~iWD 531 (531)
||+.+++.+..+. +...+.+++|+| ++.+|++++. ||.|++||
T Consensus 330 ~d~~~~~~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d 387 (433)
T 3bws_A 330 YDLKEKKVQKSIP-VFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVID 387 (433)
T ss_dssp EETTTTEEEEEEE-CSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEE
T ss_pred EECCCCcEEEEec-CCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEEEEE
Confidence 9999999988886 667789999999 6777777766 57999997
No 124
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=9.2e-25 Score=229.23 Aligned_cols=239 Identities=8% Similarity=0.021 Sum_probs=183.4
Q ss_pred eeeeecccCeeeEEec-CccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCc------ceEEEEccCCC
Q 009597 266 VEDKSTFHGKCMRTYM-GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI------PYVVKLNPDDD 338 (531)
Q Consensus 266 i~~~~~~~~~~~~~l~-gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~------~~~~~~~~~~~ 338 (531)
+..|...+++....+. +|...|.+++|||+|.+||+++.||.|+|||.+. ++..+. ++. ...++|+|+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPD-- 140 (588)
T 2j04_A 66 ENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPI-- 140 (588)
T ss_dssp CCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSS--
T ss_pred cceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCC--
Confidence 3344444444333443 5788999999999999999999999999999654 667666 442 556666664
Q ss_pred CCcEEEEeeCCCeEEEEECCCCce-------eEEE----cccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeE---
Q 009597 339 KQNILLAGMSDKKIVQWDMNTKEI-------TQEY----DQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVV--- 404 (531)
Q Consensus 339 ~~~~l~sg~~dg~I~iwd~~t~~~-------~~~~----~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~--- 404 (531)
+.+|++|+.||+|++||+.++.. +.++ .+|...|.+++|+|+| +++++.|++|++||+.....
T Consensus 141 -G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~ 217 (588)
T 2j04_A 141 -ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPV 217 (588)
T ss_dssp -SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCC
T ss_pred -CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccc
Confidence 46899999999999999998863 5676 6677899999999999 88999999999999988763
Q ss_pred EEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEE--cCCCCEEEEEeCCC
Q 009597 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNF--SPDGRFVMSGDGEG 482 (531)
Q Consensus 405 ~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~--spdg~~l~sgs~dg 482 (531)
...+...|...|.+++|+ +.+|++++ +++|++||+.++... ....+|. ..+..+.| +|++..|++++.+|
T Consensus 218 ~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~---~~~~gh~--~~V~~va~~~s~d~~~La~a~edG 289 (588)
T 2j04_A 218 SRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSIS---SLKTGSL--ENFHIIPLNHEKESTILLMSNKTS 289 (588)
T ss_dssp EEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEE---EEECSCC--SCCCEEEETTCSSCEEEEECSSCE
T ss_pred eeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEE---EEEcCCC--ceEEEEEeeeCCCCCEEEEEcCCC
Confidence 344544688899999999 68888887 799999999876442 1122564 55778999 99999999999999
Q ss_pred cEEEEECCCCe-----------------------EEEEeeccCCcEEEEEEecCCCCEEEEEeC
Q 009597 483 KCWFWDWKSCK-----------------------VFRTLKCHEGVCIGCEWHPLEQSKVATCGW 523 (531)
Q Consensus 483 ~I~iwd~~~~~-----------------------~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~ 523 (531)
+ ++|....-. .+..+. +...|.+++|+| ++..+|+++.
T Consensus 290 ~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~-~~~~I~~va~SP-dG~~lA~~~~ 350 (588)
T 2j04_A 290 Y-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYE-TTLVIHGISLSP-DGYSIAIVYD 350 (588)
T ss_dssp E-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSC-CEEEEEEEEECT-TSSEEEEEEE
T ss_pred C-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeec-cceEEEEEEECC-CCCEEEEEEe
Confidence 9 999864211 111222 234589999999 8888988864
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=5.2e-25 Score=226.78 Aligned_cols=232 Identities=14% Similarity=0.102 Sum_probs=166.9
Q ss_pred HHHhhhhccCCCCCCCceeeeeecccCeee-----EEecCccCceEEEEEcc--------CCCEEEEEecCCeEEEEeCC
Q 009597 248 YAKKKEEKGNAGGEKGEHVEDKSTFHGKCM-----RTYMGHSKAVRDISFCN--------DGTKFLTASYDKNIKYWDTE 314 (531)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~l~gH~~~V~~l~fsp--------dg~~l~s~s~Dg~I~vWd~~ 314 (531)
.........++++..++.+++|+...+.+. ..+.||.+.|.+|+|+| |+++|+|||.|++|+|||+.
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 344556677888999999999998877543 45789999999999998 78999999999999999998
Q ss_pred CCcEEEEc-cCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEE-------------------------Ecc
Q 009597 315 TGQVIRTF-STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE-------------------------YDQ 368 (531)
Q Consensus 315 t~~~i~~~-~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~-------------------------~~~ 368 (531)
++.++..+ .....+..+.|+|.. .++|++|+.|++|++||+++++.... ..+
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~--~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSN--PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTE--EEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred CCceeeeecCCCCCcEEEEECCCC--CceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 87665544 445555667776643 36899999999999999988764332 235
Q ss_pred cCCCeeEEEEe-cCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCC------------------CccEEEEeC--CCCE
Q 009597 369 HLGAVNTITFV-DSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH------------------SMPSISLHP--NTNW 427 (531)
Q Consensus 369 h~~~I~~l~~s-p~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~------------------~v~~v~~sp--~~~~ 427 (531)
|...|.++.|+ ++++.|++++.|+++++||+........+.. +.. ......++| ++.+
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISD-STMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF 331 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEE
T ss_pred ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEee-ecCccccEEEccccccccccCcceeEEEccCCCCEE
Confidence 77889999998 7999999999999999999987654443321 221 122333444 3445
Q ss_pred EEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 009597 428 LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488 (531)
Q Consensus 428 l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd 488 (531)
+++|+.||+|++||+.++.... .+.+| ...|.+++|+|||++||+++.+| +.+|.
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~~~---~~~~~--~~~V~svafspdG~~LA~as~~G-v~lvr 386 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDSNS---IPIQL--GMPIVDFCWHQDGSHLAIATEGS-VLLTR 386 (393)
T ss_dssp EEEETTTTEEEEEETTCTTCCE---EEEEC--SSCEEEEEECTTSSEEEEEESSE-EEEEE
T ss_pred EEEECCCCEEEEEECCCCcEEE---EecCC--CCcEEEEEEcCCCCEEEEEeCCC-eEEEE
Confidence 6777889999999998875543 23334 34699999999999999998776 54554
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=7.2e-23 Score=219.54 Aligned_cols=275 Identities=12% Similarity=0.069 Sum_probs=213.5
Q ss_pred hhhccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeC--CCCcEEEEccCCCcce
Q 009597 252 KEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT--ETGQVIRTFSTGKIPY 329 (531)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~--~t~~~i~~~~~~~~~~ 329 (531)
+++...+.+..++.|.+|+..+++++.++..+.. +.+++|+|||++|++++.|++|++||+ .+++++.++..+..+.
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~ 225 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR 225 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc
Confidence 3455666677788999999999999999984333 999999999999999999999999999 8999999998877777
Q ss_pred EEEEccCCC-CCcEEEEee-CCCeEEEEECCCCceeEEEccc----------CC-CeeEEEEecCCCE-EEEEeCCCCEE
Q 009597 330 VVKLNPDDD-KQNILLAGM-SDKKIVQWDMNTKEITQEYDQH----------LG-AVNTITFVDSNRR-FVTSSDDKSLR 395 (531)
Q Consensus 330 ~~~~~~~~~-~~~~l~sg~-~dg~I~iwd~~t~~~~~~~~~h----------~~-~I~~l~~sp~~~~-l~s~s~Dg~I~ 395 (531)
.+.+++... ++.++++++ .+++|.+||..+++++..+..+ .. .+.++.++|++.. +++...++.|.
T Consensus 226 ~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~ 305 (543)
T 1nir_A 226 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVL 305 (543)
T ss_dssp EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEE
Confidence 788876111 234566665 5899999999999999888652 23 7889999997765 55667789999
Q ss_pred EEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEEEEEcCCcceeceeeeec-CCccccceEEEEEcCC-C
Q 009597 396 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS-LDNQILIYSTRERFQLNKKKRFA-GHIVAGYACQVNFSPD-G 472 (531)
Q Consensus 396 iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~~~-~~~~~~~v~~l~~spd-g 472 (531)
+||+.+...+......+...+..+.|+|++++|++++ .+++|.+||+.++..+..+.... .|. +....+ ++|+ +
T Consensus 306 vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~--g~g~~~-~~p~~g 382 (543)
T 1nir_A 306 LVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP--GRGANF-VHPKYG 382 (543)
T ss_dssp EEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCC--TTCEEE-EETTTE
T ss_pred EEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCC--CCCccc-CCCCCc
Confidence 9999875433311112556788999999999887666 58899999999986654433211 132 222223 4677 6
Q ss_pred CEEEEEe-CCCcEEEEECCC-------CeEEEEeeccCCcEEEEEEecCCCCEEEEEe-------CCCCEEeeC
Q 009597 473 RFVMSGD-GEGKCWFWDWKS-------CKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-------WDGLIKYWD 531 (531)
Q Consensus 473 ~~l~sgs-~dg~I~iwd~~~-------~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s-------~Dg~I~iWD 531 (531)
.+++++. .+++|.+||+.+ ++++.++.+|.+.+..+.++| ++.+|++++ .+++|.|||
T Consensus 383 ~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~p-dg~~l~v~~~~~~~~~~~~~v~v~d 455 (543)
T 1nir_A 383 PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHP-KSSHLYVDTTFNPDARISQSVAVFD 455 (543)
T ss_dssp EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCT-TCCEEEECCTTCSSHHHHTCEEEEE
T ss_pred cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCC-CCCcEEEecCCCCCcccCceEEEEE
Confidence 6667765 689999999998 899999999988888999999 788888877 377999997
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=1.6e-22 Score=199.94 Aligned_cols=201 Identities=13% Similarity=0.115 Sum_probs=146.8
Q ss_pred ccCceEEEEEccC----CCEEEEEe--------------------cCCeEEEEeC-CCCcEEEEcc-CCCcceEEEEccC
Q 009597 283 HSKAVRDISFCND----GTKFLTAS--------------------YDKNIKYWDT-ETGQVIRTFS-TGKIPYVVKLNPD 336 (531)
Q Consensus 283 H~~~V~~l~fspd----g~~l~s~s--------------------~Dg~I~vWd~-~t~~~i~~~~-~~~~~~~~~~~~~ 336 (531)
|...|+.|+|+|| ++++++++ .|+.|++|++ .+|+.+..+. ......++.|++.
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 4456666666666 55555544 3788888888 4466665543 3344567788875
Q ss_pred CCCCcEEEEeeCCCeEEEEECCCCceeEEEcccC---CCeeEEEEecCCCEE------------EEEeCCCCEEEEEcCC
Q 009597 337 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHL---GAVNTITFVDSNRRF------------VTSSDDKSLRVWEFGI 401 (531)
Q Consensus 337 ~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~---~~I~~l~~sp~~~~l------------~s~s~Dg~I~iwd~~~ 401 (531)
+..+.+|++|+.|++|+|||+.++++++++.+|. ..+.+++|+|++.++ ++|+.|++|++||..+
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 5566899999999999999999999999998654 467788999999876 5678899999999999
Q ss_pred CeEEEEee----CCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEE
Q 009597 402 PVVIKYIS----EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS 477 (531)
Q Consensus 402 ~~~~~~~~----~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s 477 (531)
+..+..+. .+|...+. ..+.++.++++++.|++|+|||+.+++.+ ..+.+|... .+..++|+|||++|++
T Consensus 270 gk~l~v~~~~~p~Gh~~~~l--sg~~sg~~lASgS~DgTIkIWDl~tGk~l---~tL~gH~~~-vvs~vafSPDG~~LaS 343 (356)
T 2w18_A 270 TLSVGVMLYCLPPGQAGRFL--EGDVKDHCAAAILTSGTIAIWDLLLGQCT---ALLPPVSDQ-HWSFVKWSGTDSHLLA 343 (356)
T ss_dssp TEEEEEEEECCCTTCCCCEE--EEEEETTEEEEEETTSCEEEEETTTCSEE---EEECCC--C-CCCEEEECSSSSEEEE
T ss_pred CEEEEEEEeeccCCCcceeE--ccccCCCEEEEEcCCCcEEEEECCCCcEE---EEecCCCCC-eEEEEEECCCCCEEEE
Confidence 98776542 34444433 33334889999999999999999998665 445666432 2445899999999999
Q ss_pred EeCCCcEEEEEC
Q 009597 478 GDGEGKCWFWDW 489 (531)
Q Consensus 478 gs~dg~I~iwd~ 489 (531)
|+.|++|+|||+
T Consensus 344 GS~D~TIklWd~ 355 (356)
T 2w18_A 344 GQKDGNIFVYHY 355 (356)
T ss_dssp ECTTSCEEEEEE
T ss_pred EECCCcEEEecC
Confidence 999999999985
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=8.4e-22 Score=204.34 Aligned_cols=235 Identities=11% Similarity=0.112 Sum_probs=187.3
Q ss_pred ceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCC---eEEEEeCCCCcEEEEccCCCcceEEEEccCCCCC
Q 009597 264 EHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDK---NIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQ 340 (531)
Q Consensus 264 ~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg---~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~ 340 (531)
+.+++|+.. +..++.+.+|...|.+++|+|||++|++++.++ .|++||+.++++............+.|++++ .
T Consensus 159 ~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg--~ 235 (415)
T 2hqs_A 159 YELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDG--S 235 (415)
T ss_dssp EEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTS--S
T ss_pred ceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCC--C
Confidence 689999985 667888999999999999999999999999885 9999999999887544444445566666643 2
Q ss_pred cEEEEeeCCCe--EEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeC-CC--CEEEEEcCCCeEEEEeeCCCCCC
Q 009597 341 NILLAGMSDKK--IVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD-DK--SLRVWEFGIPVVIKYISEPHMHS 415 (531)
Q Consensus 341 ~~l~sg~~dg~--I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~-Dg--~I~iwd~~~~~~~~~~~~~~~~~ 415 (531)
.++++++.++. |++||+.+++. ..+..|...+.+++|+|++++|++++. ++ .|.+||+.++.... +. .+...
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~-~~~~~ 312 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-IT-WEGSQ 312 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CC-CSSSE
T ss_pred EEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-Ee-cCCCc
Confidence 45557766654 99999998876 567778889999999999999998886 45 57777988776432 22 25667
Q ss_pred ccEEEEeCCCCEEEEEEcC---CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCC---cEEEEEC
Q 009597 416 MPSISLHPNTNWLAAQSLD---NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG---KCWFWDW 489 (531)
Q Consensus 416 v~~v~~sp~~~~l~s~s~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg---~I~iwd~ 489 (531)
+.+++|+|+|++|++++.+ ..|.+||+.++... .+..+. .+.+++|+|+|++|++++.++ .|++||+
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~----~l~~~~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ----VLSSTF---LDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE----ECCCSS---SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE----EecCCC---CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 8899999999999998875 58999999876432 233332 578899999999999988776 7999998
Q ss_pred CCCeEEEEeeccCCcEEEEEEec
Q 009597 490 KSCKVFRTLKCHEGVCIGCEWHP 512 (531)
Q Consensus 490 ~~~~~~~~~~~h~~~V~~v~~~p 512 (531)
. +.....+..|.+.|.+++|+|
T Consensus 386 ~-g~~~~~l~~~~~~v~~~~~~~ 407 (415)
T 2hqs_A 386 D-GRFKARLPATDGQVKFPAWSP 407 (415)
T ss_dssp T-SCCEEECCCSSSEEEEEEECC
T ss_pred C-CCcEEEeeCCCCCCcCCcccc
Confidence 7 556778889999999999999
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=5.6e-22 Score=205.70 Aligned_cols=252 Identities=12% Similarity=0.078 Sum_probs=192.6
Q ss_pred eeeeeec--ccCeee--EEecCccCceEEEEEccC--------------CCEEEEEecC------CeEEEEeCCCCcEEE
Q 009597 265 HVEDKST--FHGKCM--RTYMGHSKAVRDISFCND--------------GTKFLTASYD------KNIKYWDTETGQVIR 320 (531)
Q Consensus 265 ~i~~~~~--~~~~~~--~~l~gH~~~V~~l~fspd--------------g~~l~s~s~D------g~I~vWd~~t~~~i~ 320 (531)
.+++|+. .+++++ ..+.+|...++.+++++. +..++.++.+ +.|++||+..+....
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~ 173 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFV 173 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEE
Confidence 8999999 999988 569999999999888751 5667766654 799999997654433
Q ss_pred EccCCCcceEEEEccCCCCCcEEEEeeCCC---eEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEE-EEeCCCC--E
Q 009597 321 TFSTGKIPYVVKLNPDDDKQNILLAGMSDK---KIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKS--L 394 (531)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg---~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~-s~s~Dg~--I 394 (531)
..........+.|++++ ..|++++.++ .|++||+.+++.. .+..|...+.+++|+|+|++|+ +++.++. |
T Consensus 174 l~~~~~~v~~~~~Spdg---~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i 249 (415)
T 2hqs_A 174 VHRSPQPLMSPAWSPDG---SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNL 249 (415)
T ss_dssp EEEESSCEEEEEECTTS---SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred EeCCCCcceeeEEcCCC---CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceE
Confidence 33334455666666643 5678887775 9999999998875 4667888999999999999888 6666665 9
Q ss_pred EEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcC-C--eEEEEEcCCcceeceeeeecCCccccceEEEEEcCC
Q 009597 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD-N--QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 471 (531)
Q Consensus 395 ~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~D-g--~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd 471 (531)
++||+.++... .+. .+...+.+++|+|+|++|++++.+ + .|.+||+.++... .+..+ ...+.+++|+|+
T Consensus 250 ~~~d~~~~~~~-~l~-~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~----~l~~~--~~~~~~~~~spd 321 (415)
T 2hqs_A 250 YVMDLASGQIR-QVT-DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ----RITWE--GSQNQDADVSSD 321 (415)
T ss_dssp EEEETTTCCEE-ECC-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE----ECCCS--SSEEEEEEECTT
T ss_pred EEEECCCCCEE-eCc-CCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE----EEecC--CCcccCeEECCC
Confidence 99999887653 333 367789999999999999988864 4 6788898775421 22223 245778999999
Q ss_pred CCEEEEEeCC---CcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCC---CEEeeC
Q 009597 472 GRFVMSGDGE---GKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDG---LIKYWD 531 (531)
Q Consensus 472 g~~l~sgs~d---g~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg---~I~iWD 531 (531)
|++|++++.+ +.|++||+.+++.. .+..|. .+.+++|+| ++.+|++++.|+ .|++||
T Consensus 322 G~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~sp-dg~~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 322 GKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAP-NGTMVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp SSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECT-TSSEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcC-CCCEEEEEEcCCCccEEEEEE
Confidence 9999988764 58999999988774 455554 789999999 777788877776 688886
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=1.9e-21 Score=194.13 Aligned_cols=267 Identities=7% Similarity=0.095 Sum_probs=189.3
Q ss_pred CCCCCceeeeeecc-cC--eeeEEecCccCceEEEEEccCCCEEEEEecC-CeEEEEeCC--CCc--EEEEccCCCcceE
Q 009597 259 GGEKGEHVEDKSTF-HG--KCMRTYMGHSKAVRDISFCNDGTKFLTASYD-KNIKYWDTE--TGQ--VIRTFSTGKIPYV 330 (531)
Q Consensus 259 ~~~~~~~i~~~~~~-~~--~~~~~l~gH~~~V~~l~fspdg~~l~s~s~D-g~I~vWd~~--t~~--~i~~~~~~~~~~~ 330 (531)
++..++.+.+|+.. .+ +.+.. ..|...+.+++|+|+|++|++++.+ +.|++|++. +++ .+..+.....+..
T Consensus 10 ~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (343)
T 1ri6_A 10 ASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTH 88 (343)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSE
T ss_pred eCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcE
Confidence 33556788888774 33 33444 3478889999999999999988886 999999997 555 3455555556667
Q ss_pred EEEccCCCCCcEEEEeeCCCeEEEEECC---CCceeEEEcccCCCeeEEEEecCCCEEEEEe-CCCCEEEEEcCC-CeEE
Q 009597 331 VKLNPDDDKQNILLAGMSDKKIVQWDMN---TKEITQEYDQHLGAVNTITFVDSNRRFVTSS-DDKSLRVWEFGI-PVVI 405 (531)
Q Consensus 331 ~~~~~~~~~~~~l~sg~~dg~I~iwd~~---t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s-~Dg~I~iwd~~~-~~~~ 405 (531)
+.++++.. .+++++..++.|.+||+. +.+.+..+..+ ..+.+++|+|+++++++++ .++.|++||+.. +...
T Consensus 89 ~~~s~dg~--~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 89 ISTDHQGQ--FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp EEECTTSS--EEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred EEEcCCCC--EEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 77776432 345555568999999994 44455555544 4689999999999888877 899999999987 5432
Q ss_pred E----EeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEEEEEcCC--cce--eceeeeec-CCccccceEEEEEcCCCCEE
Q 009597 406 K----YISEPHMHSMPSISLHPNTNWLAAQS-LDNQILIYSTRE--RFQ--LNKKKRFA-GHIVAGYACQVNFSPDGRFV 475 (531)
Q Consensus 406 ~----~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~~--~~~--~~~~~~~~-~~~~~~~v~~l~~spdg~~l 475 (531)
. .+.......+.+++|+|++++|++++ .++.|.+|++.. +.. ......+. ++.....+..++|+|+|++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l 245 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL 245 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE
Confidence 2 22333445778899999999776665 789999999954 211 11111111 11222356679999999988
Q ss_pred EEE-eCCCcEEEEECC----CCeEEEEeeccCCcEEEEEEecCCCCEEEEEe-CCCCEEeeC
Q 009597 476 MSG-DGEGKCWFWDWK----SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYWD 531 (531)
Q Consensus 476 ~sg-s~dg~I~iwd~~----~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s-~Dg~I~iWD 531 (531)
+++ ..++.|.+||+. ..+.+..+..+.. +.+++|+| ++.+|++++ .++.|.+|+
T Consensus 246 ~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~-dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 246 YACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDH-SGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp EEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECT-TSSEEEEECTTTCEEEEEE
T ss_pred EEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECC-CCCEEEEecCCCCeEEEEE
Confidence 754 478999999998 3455666665555 78999999 666666666 689999993
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=3.8e-21 Score=191.85 Aligned_cols=266 Identities=11% Similarity=0.104 Sum_probs=195.1
Q ss_pred cCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEec-CCeEEEEeCCCCcE-EEEccCCCcceE-EE
Q 009597 256 GNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASY-DKNIKYWDTETGQV-IRTFSTGKIPYV-VK 332 (531)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~-Dg~I~vWd~~t~~~-i~~~~~~~~~~~-~~ 332 (531)
+.++...++.|.+|+..+++.+..+..+...+ +++|+|+|++|++++. ++.|.+||+.+++. ...+..+..+.. +.
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVD 90 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEE
T ss_pred EEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceE
Confidence 34455667789999999999999888877778 9999999997766665 88999999999987 777766666666 77
Q ss_pred EccCCCCCcEEEEeeCCC---eEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEE-EEeCCCC-EEEEEcCCCeEE--
Q 009597 333 LNPDDDKQNILLAGMSDK---KIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKS-LRVWEFGIPVVI-- 405 (531)
Q Consensus 333 ~~~~~~~~~~l~sg~~dg---~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~-s~s~Dg~-I~iwd~~~~~~~-- 405 (531)
++++. .+++++..++ .|.+||+.+++.+..+..+ ....+++|+|++++++ +...++. |.+|++.....+
T Consensus 91 ~s~dg---~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 91 ITPDD---QFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD 166 (331)
T ss_dssp ECTTS---SEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred ECCCC---CEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee
Confidence 77743 4566555553 8999999999988887654 4568999999998555 4556688 999998753222
Q ss_pred --EEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEe-CC
Q 009597 406 --KYISEPHMHSMPSISLHPNTNWLAAQS-LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD-GE 481 (531)
Q Consensus 406 --~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs-~d 481 (531)
.... ........++|+|+++++++++ .++.|.+||+.++..+.....+... ..+..++|+|+|++|++++ .+
T Consensus 167 ~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~v~~~~~ 242 (331)
T 3u4y_A 167 TGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN---NLPGTIVVSRDGSTVYVLTEST 242 (331)
T ss_dssp EEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS---SCCCCEEECTTSSEEEEECSSE
T ss_pred cCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC---CCCceEEECCCCCEEEEEEcCC
Confidence 1111 2445678999999999766655 5889999999887652222333322 3456699999999776665 57
Q ss_pred CcEEEEECCCCeE--EEEeecc----CC---cEEEEEEecCCCCEE-EEEeCCCCEEeeC
Q 009597 482 GKCWFWDWKSCKV--FRTLKCH----EG---VCIGCEWHPLEQSKV-ATCGWDGLIKYWD 531 (531)
Q Consensus 482 g~I~iwd~~~~~~--~~~~~~h----~~---~V~~v~~~p~~~~~l-~t~s~Dg~I~iWD 531 (531)
+.|.+||+.+++. +..+..+ .. ....++|+| ++.+| +++..++.|.+||
T Consensus 243 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 243 VDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNK-TETKLFISANISRELKVFT 301 (331)
T ss_dssp EEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECT-TSSEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCceeeecccccccccCCCCcccccceEECC-CCCEEEEecCCCCcEEEEE
Confidence 7899999999887 4444332 22 224589999 55555 5555677999997
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=3.4e-21 Score=206.50 Aligned_cols=279 Identities=11% Similarity=0.070 Sum_probs=208.5
Q ss_pred HHHHhhhhccCCCCCCCceeeeeec--ccCeeeEEecCccCceEEEEEcc----CCCEEEEEec-CCeEEEEeCCCCcEE
Q 009597 247 EYAKKKEEKGNAGGEKGEHVEDKST--FHGKCMRTYMGHSKAVRDISFCN----DGTKFLTASY-DKNIKYWDTETGQVI 319 (531)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~l~gH~~~V~~l~fsp----dg~~l~s~s~-Dg~I~vWd~~t~~~i 319 (531)
.+..+++++.+..++.++.|.+|+. .+++++.++.. ...+.+++|+| ||++|++++. +++|.|||..+++++
T Consensus 183 ~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~ 261 (543)
T 1nir_A 183 ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK 261 (543)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE
T ss_pred eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccc
Confidence 3446677777776677799999999 88999999984 55689999999 9999998885 899999999999999
Q ss_pred EEccCCC----------cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeE--EEcccCCCeeEEEEecCCCEEEE
Q 009597 320 RTFSTGK----------IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ--EYDQHLGAVNTITFVDSNRRFVT 387 (531)
Q Consensus 320 ~~~~~~~----------~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~--~~~~h~~~I~~l~~sp~~~~l~s 387 (531)
.++.... ...+..+...++...++++...++.|.+||+.+.+.+. .+. +...+.++.|+|++++|++
T Consensus 262 ~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 262 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMT 340 (543)
T ss_dssp EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEE
T ss_pred eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEE
Confidence 8886521 12333343444445788888999999999998876544 443 5667889999999998776
Q ss_pred Ee-CCCCEEEEEcCCCeEEEEeeC---CCCCCccEEEEeCC-CCEEEEEE-cCCeEEEEEcCCcce----eceeeeecCC
Q 009597 388 SS-DDKSLRVWEFGIPVVIKYISE---PHMHSMPSISLHPN-TNWLAAQS-LDNQILIYSTRERFQ----LNKKKRFAGH 457 (531)
Q Consensus 388 ~s-~Dg~I~iwd~~~~~~~~~~~~---~~~~~v~~v~~sp~-~~~l~s~s-~Dg~I~iwd~~~~~~----~~~~~~~~~~ 457 (531)
++ .+++|.+||+.+++.+..+.. +|......+ ++|+ +.+++++. .|++|.+||+.+... ...++.+.+|
T Consensus 341 a~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~ 419 (543)
T 1nir_A 341 AANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQ 419 (543)
T ss_dssp EEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred EecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcC
Confidence 55 588999999999988877763 243333333 4777 55566655 579999999987211 2334555555
Q ss_pred ccccceEEEEEcCCCCEEEEEe-------CCCcEEEEECCCCeEE-EEe--------eccCCcEEEEEEecCCCCEEEEE
Q 009597 458 IVAGYACQVNFSPDGRFVMSGD-------GEGKCWFWDWKSCKVF-RTL--------KCHEGVCIGCEWHPLEQSKVATC 521 (531)
Q Consensus 458 ~~~~~v~~l~~spdg~~l~sgs-------~dg~I~iwd~~~~~~~-~~~--------~~h~~~V~~v~~~p~~~~~l~t~ 521 (531)
. ..+..+.++|+|++|++++ .+++|.|||+.+++.. ..+ ..+...+..+.|+| ++..|+.+
T Consensus 420 g--~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~g~~~~~s 496 (543)
T 1nir_A 420 G--GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNK-RGDEVWFS 496 (543)
T ss_dssp C--SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECS-SSSEEEEE
T ss_pred C--CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCC-CCCEEEEE
Confidence 3 3355699999999999987 2679999999998876 443 34567899999999 55555544
Q ss_pred e-----CCCCEEeeC
Q 009597 522 G-----WDGLIKYWD 531 (531)
Q Consensus 522 s-----~Dg~I~iWD 531 (531)
. .|+.|.|||
T Consensus 497 ~~~~~~~~~~i~v~D 511 (543)
T 1nir_A 497 VWNGKNDSSALVVVD 511 (543)
T ss_dssp EECCTTSCCEEEEEE
T ss_pred eecCCCCCCeEEEEE
Confidence 2 479999997
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.5e-21 Score=189.85 Aligned_cols=252 Identities=13% Similarity=0.092 Sum_probs=184.9
Q ss_pred CCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCC-CcEEEEccCC--CcceEEEEcc
Q 009597 259 GGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTG--KIPYVVKLNP 335 (531)
Q Consensus 259 ~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t-~~~i~~~~~~--~~~~~~~~~~ 335 (531)
.+..++.+++|+...++.. .+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++....+... .....+.|++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 3466788999999887766 5666999999999999999999887 78999999999 8877666444 2344566666
Q ss_pred CCCCCcEEEEee--CC--CeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEE-EEeCCCCEEEEEcC--CCeEEEEe
Q 009597 336 DDDKQNILLAGM--SD--KKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFV-TSSDDKSLRVWEFG--IPVVIKYI 408 (531)
Q Consensus 336 ~~~~~~~l~sg~--~d--g~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~-s~s~Dg~I~iwd~~--~~~~~~~~ 408 (531)
+. ..|++++ .+ ..|.+|++.++. ...+..+ ..+.+++|+|++++|+ +++.++.++||++. .+.. ..+
T Consensus 95 dg---~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~ 168 (297)
T 2ojh_A 95 DG---ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRL 168 (297)
T ss_dssp TS---SEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EEC
T ss_pred CC---CEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEc
Confidence 43 5677776 33 455555555555 3444434 3589999999999877 77889999999864 3333 333
Q ss_pred eCCCCCCccEEEEeCCCCEEEEEE-cCCeEEEEEcC-CcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC-----
Q 009597 409 SEPHMHSMPSISLHPNTNWLAAQS-LDNQILIYSTR-ERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE----- 481 (531)
Q Consensus 409 ~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~-~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d----- 481 (531)
..+...+.+++|+|++++|++++ .++.+.||++. ....+ ..+..+. ..+..++|+|+|++|++++.+
T Consensus 169 -~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~ 242 (297)
T 2ojh_A 169 -THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV---ERITDSA--YGDWFPHPSPSGDKVVFVSYDADVFD 242 (297)
T ss_dssp -CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE---EECCCCS--EEEEEEEECTTSSEEEEEEEETTCCS
T ss_pred -ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc---EEEecCC--cccCCeEECCCCCEEEEEEcCCCCCc
Confidence 33667899999999999888777 48999999876 33222 3344442 457789999999999988765
Q ss_pred ------CcEEEEECCCCeE--EEEeeccCCcEEEEEEecCCCCEEEEEeCCC
Q 009597 482 ------GKCWFWDWKSCKV--FRTLKCHEGVCIGCEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 482 ------g~I~iwd~~~~~~--~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg 525 (531)
+.|++||+.+++. +..+..|...+.+++|+| ++..|++++.|.
T Consensus 243 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~ 293 (297)
T 2ojh_A 243 HPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSP-DGDEFAYVRYFP 293 (297)
T ss_dssp CCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCT-TSSEEEEEEECC
T ss_pred ccccCceEEEEEecCCCCceeeeccCCCCcccccceECC-CCCEEEEEEecc
Confidence 5699999988765 444557888899999999 667777666543
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=4.5e-20 Score=185.30 Aligned_cols=243 Identities=12% Similarity=0.153 Sum_probs=192.3
Q ss_pred ccCceEEEEEccCCCEEEEEec-------CCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEE
Q 009597 283 HSKAVRDISFCNDGTKFLTASY-------DKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 355 (531)
Q Consensus 283 H~~~V~~l~fspdg~~l~s~s~-------Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iw 355 (531)
....+..++|+|++++|++++. ++.|.+||..+++.+..+..+..+..+.+.++.. .+++++..++.|.+|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQ--TLWFGNTVNSAVTAI 116 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTT--EEEEEETTTTEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCC--EEEEEecCCCEEEEE
Confidence 4457889999999998888774 5689999999999999988777777777777543 467777778999999
Q ss_pred ECCCCceeEEEcccCCC---------eeEEEEecCCCEEEEEe--CCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCC
Q 009597 356 DMNTKEITQEYDQHLGA---------VNTITFVDSNRRFVTSS--DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN 424 (531)
Q Consensus 356 d~~t~~~~~~~~~h~~~---------I~~l~~sp~~~~l~s~s--~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~ 424 (531)
|+.+++.+..+..+... +.+++|+|+++++++++ .++.|.+||..+++.+..+.. +...+.+++|+|+
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d 195 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSE 195 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECC-CCTTCCCCEEETT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecC-CCCccceEEECCC
Confidence 99999998888765432 78899999999877776 478899999999988877652 4455889999999
Q ss_pred CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeEEEEeeccCC
Q 009597 425 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG-EGKCWFWDWKSCKVFRTLKCHEG 503 (531)
Q Consensus 425 ~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~-dg~I~iwd~~~~~~~~~~~~h~~ 503 (531)
+++|++++.++.|.+||+.++..+....... ......+..++|+|+|++|++++. ++.|.+||..+++.+..+..+..
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 274 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKKLLD-DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES 274 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEECCC-SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEEcCC-CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 9999999999999999999876554333211 111345777999999998777664 58999999999999888875543
Q ss_pred cEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 504 VCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 504 ~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.+++|+|++..+++++..++.|.+||
T Consensus 275 --~~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 275 --LAVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp --CCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred --ceEEECCCCCEEEEEECCCCeEEEEE
Confidence 57999994444555665799999997
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=1.1e-20 Score=188.13 Aligned_cols=259 Identities=9% Similarity=0.038 Sum_probs=197.2
Q ss_pred CCCCCCCceeeeeecccCeeeEEecCcc-C-ceEEEEEccCCCEE-EEEecCCeEEEEeCCCCcEEEEccCCC------c
Q 009597 257 NAGGEKGEHVEDKSTFHGKCMRTYMGHS-K-AVRDISFCNDGTKF-LTASYDKNIKYWDTETGQVIRTFSTGK------I 327 (531)
Q Consensus 257 ~~~~~~~~~i~~~~~~~~~~~~~l~gH~-~-~V~~l~fspdg~~l-~s~s~Dg~I~vWd~~t~~~i~~~~~~~------~ 327 (531)
++.+..++.+.+|+..+++.+..+.... . .+.+++|+|+|+++ ++++.++.|.+||+.+++.+..+.... .
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccc
Confidence 3445667889999999999998886333 2 58999999999765 556667899999999999988876544 4
Q ss_pred ceEEEEccCCCCCcEEEEee------------CCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEE
Q 009597 328 PYVVKLNPDDDKQNILLAGM------------SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLR 395 (531)
Q Consensus 328 ~~~~~~~~~~~~~~~l~sg~------------~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~ 395 (531)
+..+.++++. ..++++. .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ++.|.
T Consensus 84 ~~~~~~s~dg---~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~ 157 (337)
T 1pby_B 84 LFGAALSPDG---KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLH 157 (337)
T ss_dssp TTCEEECTTS---SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEE
T ss_pred ccceEECCCC---CEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEE
Confidence 5566676643 3566654 579999999999988887765 4568889999999988887 68899
Q ss_pred EEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCC------------------------eEEEEEcCCcceecee
Q 009597 396 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN------------------------QILIYSTRERFQLNKK 451 (531)
Q Consensus 396 iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg------------------------~I~iwd~~~~~~~~~~ 451 (531)
+||+.++..+..+..... ...+.|+|++..|++.+..+ .|.+||+.++... .
T Consensus 158 ~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~- 233 (337)
T 1pby_B 158 VMDPEAGTLVEDKPIQSW--EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-M- 233 (337)
T ss_dssp EEETTTTEEEEEECSTTT--TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-E-
T ss_pred EEECCCCcEeeeeecccc--CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-E-
Confidence 999999988776654321 12337889888765544332 4689999886543 2
Q ss_pred eeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 452 ~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
..+..+ ...+..++|+|+|++|+++ ++.|++||+.+++.+..+..+ ..+.+++|+| ++.+|++++.++.|++||
T Consensus 234 ~~~~~~--~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 234 REVRIM--DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVST-DGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp EEEEEC--SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECT-TSCEEEEESBSSEEEEEE
T ss_pred eecCCC--CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECC-CCCEEEEEcCCCcEEEEE
Confidence 222222 2346779999999999988 689999999999998888754 4568999999 677888888899999997
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=2.6e-19 Score=179.72 Aligned_cols=250 Identities=14% Similarity=0.101 Sum_probs=194.5
Q ss_pred CceeeeeecccCeeeEEecCccCceEEEEEccCCCEEE-EEecCCeEEEEeCCCCcEEEEccCCCc----------ceEE
Q 009597 263 GEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKI----------PYVV 331 (531)
Q Consensus 263 ~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~-s~s~Dg~I~vWd~~t~~~i~~~~~~~~----------~~~~ 331 (531)
++.+.+|+..+++.+..+... ..+.+++|+|+|++++ ++..++.|.+||..+++.+..+..+.. +..+
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPREL 146 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEE
T ss_pred CccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceE
Confidence 678999999999988888753 4588999999998555 555579999999999999888866432 3445
Q ss_pred EEccCCCCCcEEEEe-eCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeC
Q 009597 332 KLNPDDDKQNILLAG-MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISE 410 (531)
Q Consensus 332 ~~~~~~~~~~~l~sg-~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~ 410 (531)
.++++. ..+++++ ..++.|.+||+.+++.+..+..+...+.+++|+|+++++++++.++.|.+||+.+++.+..+..
T Consensus 147 ~~s~dg--~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~ 224 (353)
T 3vgz_A 147 VADDAT--NTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL 224 (353)
T ss_dssp EEETTT--TEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred EECCCC--CEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc
Confidence 665543 2344444 3588999999999999998886667789999999999999999999999999999988877654
Q ss_pred ---CCCCCccEEEEeCCCCEEEEEEcC-CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEe-CCCcEE
Q 009597 411 ---PHMHSMPSISLHPNTNWLAAQSLD-NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCW 485 (531)
Q Consensus 411 ---~~~~~v~~v~~sp~~~~l~s~s~D-g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~ 485 (531)
.+...+..++|+|+++++++++.+ +.|.+||+.++..+..... +. ...++|+|+|+++++++ .++.|.
T Consensus 225 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~-----~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 225 LDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA--PE-----SLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp CCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC--SS-----CCCEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc--CC-----CceEEECCCCCEEEEEECCCCeEE
Confidence 234457789999999988777765 8999999988765543332 11 13489999999766655 689999
Q ss_pred EEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCC
Q 009597 486 FWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 524 (531)
Q Consensus 486 iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~D 524 (531)
+||..+++.+..+..+. .+.+++|+| ++++|+.+..+
T Consensus 298 ~~d~~~~~~~~~~~~~~-~~~~~~~s~-dg~~l~v~~~~ 334 (353)
T 3vgz_A 298 VIDAKSYKVVKTFDTPT-HPNSLALSA-DGKTLYVSVKQ 334 (353)
T ss_dssp EEETTTTEEEEEEECCS-EEEEEEECT-TSCEEEEEEEC
T ss_pred EEECCCCeEEEEEecCC-CCCeEEEcC-CCCEEEEEEcc
Confidence 99999999998887544 678999999 55545444443
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=2.4e-19 Score=180.32 Aligned_cols=260 Identities=10% Similarity=0.124 Sum_probs=176.9
Q ss_pred eeeeeecccCeeeE-EecCccCceEEEEEccCCCEEEEEec---CCeEEEEeCCCCcE--EEEc-cCCCcceEEEEccCC
Q 009597 265 HVEDKSTFHGKCMR-TYMGHSKAVRDISFCNDGTKFLTASY---DKNIKYWDTETGQV--IRTF-STGKIPYVVKLNPDD 337 (531)
Q Consensus 265 ~i~~~~~~~~~~~~-~l~gH~~~V~~l~fspdg~~l~s~s~---Dg~I~vWd~~t~~~--i~~~-~~~~~~~~~~~~~~~ 337 (531)
.++.++..+++... ....+...+..++|+|||+ |++++. ++.|.+|++.+++. +..+ .....+..+.++++.
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg 97 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEAR 97 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTT
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCC
Confidence 35555555666544 4455677889999999999 665554 68999999977763 3332 234556677777754
Q ss_pred CCCcEEEEee-CCCeEEEEECCC-Cc--eeEEEcc---------cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcC-CCe
Q 009597 338 DKQNILLAGM-SDKKIVQWDMNT-KE--ITQEYDQ---------HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG-IPV 403 (531)
Q Consensus 338 ~~~~~l~sg~-~dg~I~iwd~~t-~~--~~~~~~~---------h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~-~~~ 403 (531)
.+|++++ .++.|.+|++.. +. .+..+.. +...+.+++|+|+++.+++...++.|++|++. .+.
T Consensus 98 ---~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~ 174 (347)
T 3hfq_A 98 ---QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQ 174 (347)
T ss_dssp ---TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSC
T ss_pred ---CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCc
Confidence 4455555 789999999963 32 2333321 12248899999999966666678899999998 443
Q ss_pred EE--EEeeCCCCCCccEEEEeCCCCEEEEE-EcCCeEEEEEcCC--cceeceeeeecCCcc----ccceEEEEEcCCCCE
Q 009597 404 VI--KYISEPHMHSMPSISLHPNTNWLAAQ-SLDNQILIYSTRE--RFQLNKKKRFAGHIV----AGYACQVNFSPDGRF 474 (531)
Q Consensus 404 ~~--~~~~~~~~~~v~~v~~sp~~~~l~s~-s~Dg~I~iwd~~~--~~~~~~~~~~~~~~~----~~~v~~l~~spdg~~ 474 (531)
.. ..+.......+..++|+|+|++|+++ ..++.|.+|++.. +. +.....+..... ...+..++|+|+|++
T Consensus 175 ~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 175 LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGA-FTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE-EEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred EEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc-eEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 22 22223233467789999999976664 5678999999874 22 222222222111 134778999999998
Q ss_pred EE-EEeCCCcEEEEECC---CCeEEEEeeccCCcEEEEEEecCCCCEEEEEeC-CCCEEee
Q 009597 475 VM-SGDGEGKCWFWDWK---SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW-DGLIKYW 530 (531)
Q Consensus 475 l~-sgs~dg~I~iwd~~---~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~-Dg~I~iW 530 (531)
|+ ++..++.|.+|++. ..+.+..+..+...+..++|+| ++.+|++++. ++.|.+|
T Consensus 254 l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 254 LYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDP-TEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp EEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECT-TSSEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECC-CCCEEEEEEcCCCcEEEE
Confidence 75 55568999999997 3366667777667788999999 6677776665 5889999
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=2.1e-20 Score=207.66 Aligned_cols=275 Identities=9% Similarity=-0.014 Sum_probs=198.5
Q ss_pred HHhhhhccCCCCCC-Cc-----eeeeeecccCeeeEEecCccCc------------------------eEEEEEccCCCE
Q 009597 249 AKKKEEKGNAGGEK-GE-----HVEDKSTFHGKCMRTYMGHSKA------------------------VRDISFCNDGTK 298 (531)
Q Consensus 249 ~~~~~~~~~~~~~~-~~-----~i~~~~~~~~~~~~~l~gH~~~------------------------V~~l~fspdg~~ 298 (531)
.++++++.++.... ++ .+++|+..+++....+..|... |.+++|+|||++
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~ 122 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQR 122 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSE
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCE
Confidence 45666666655444 55 8999999999888888766543 899999999999
Q ss_pred EEEEecCCeEEEEeCCCC---cEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCC---
Q 009597 299 FLTASYDKNIKYWDTETG---QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA--- 372 (531)
Q Consensus 299 l~s~s~Dg~I~vWd~~t~---~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~--- 372 (531)
|++++. +.|++||+.++ ..............+.|++++ ..|+.++ ++.|++||+.+++..+....+...
T Consensus 123 l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG---~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~ 197 (741)
T 2ecf_A 123 LLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG---GFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGN 197 (741)
T ss_dssp EEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS---SEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEE
T ss_pred EEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCC---CEEEEEe-CCcEEEEecCCCCEEEeccCCccceec
Confidence 999986 89999999988 544333333445566666643 4566665 569999999988776655444332
Q ss_pred -------------eeEEEEecCCCEEEEEeCCC---------------------------------CEEEEEcCC-CeEE
Q 009597 373 -------------VNTITFVDSNRRFVTSSDDK---------------------------------SLRVWEFGI-PVVI 405 (531)
Q Consensus 373 -------------I~~l~~sp~~~~l~s~s~Dg---------------------------------~I~iwd~~~-~~~~ 405 (531)
+.++.|+|+|++|++++.|+ .|++||+.+ +...
T Consensus 198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~ 277 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQ 277 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCE
T ss_pred cccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceE
Confidence 47899999999999988765 788999988 7654
Q ss_pred EEeeC-CCCCCccEEEEeCCCCEEEEEEc-----CCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEe
Q 009597 406 KYISE-PHMHSMPSISLHPNTNWLAAQSL-----DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD 479 (531)
Q Consensus 406 ~~~~~-~~~~~v~~v~~sp~~~~l~s~s~-----Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs 479 (531)
..... .+...+..++| |+|++|++++. +..|.+||+.++............. -..+..++|+|||+++++++
T Consensus 278 ~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-~~~~~~~~~spdg~~~~~~~ 355 (741)
T 2ecf_A 278 WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW-VPLHNSLRFLDDGSILWSSE 355 (741)
T ss_dssp EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC-CCCCSCCEECTTSCEEEEEC
T ss_pred EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc-CCcCCceEECCCCeEEEEec
Confidence 43322 36678899999 99999998775 5689999998875443222111000 00234589999999999999
Q ss_pred CCCcEEEEECC-CCeEEEEeeccCCcEEEE-EEecCCCCEEEEEeCCC--CEEeeC
Q 009597 480 GEGKCWFWDWK-SCKVFRTLKCHEGVCIGC-EWHPLEQSKVATCGWDG--LIKYWD 531 (531)
Q Consensus 480 ~dg~I~iwd~~-~~~~~~~~~~h~~~V~~v-~~~p~~~~~l~t~s~Dg--~I~iWD 531 (531)
.+|.++||.+. .++ ...+..|...|..+ .|+|++..++++++.++ .++||+
T Consensus 356 ~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 356 RTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp TTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred CCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 99987777665 445 77788888888887 59994444445666666 888884
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=9.3e-20 Score=201.81 Aligned_cols=272 Identities=10% Similarity=-0.001 Sum_probs=190.7
Q ss_pred HHhhhhccCCCCCCCceeeeeecccCeeeEEecCccC---ceEEEEEccCCCEEEEEecC---------CeEEEEeCCCC
Q 009597 249 AKKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSK---AVRDISFCNDGTKFLTASYD---------KNIKYWDTETG 316 (531)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~---~V~~l~fspdg~~l~s~s~D---------g~I~vWd~~t~ 316 (531)
.++++++.++. +.++.+++|+..++++...+.+|.. .|.+++|||||++|++++.+ +.|.+||+.++
T Consensus 23 ~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 101 (723)
T 1xfd_A 23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG 101 (723)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred EEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCC
Confidence 35566666655 5677999999999999999988876 49999999999999999864 78889999998
Q ss_pred cEEEEccCCCc----ceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCe------------------e
Q 009597 317 QVIRTFSTGKI----PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAV------------------N 374 (531)
Q Consensus 317 ~~i~~~~~~~~----~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I------------------~ 374 (531)
+. ..+..... ...+.|++++ ..|+.++. +.|++||+.+++..+....+...+ .
T Consensus 102 ~~-~~l~~~~~~~~~~~~~~~SPdG---~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~ 176 (723)
T 1xfd_A 102 DP-QSLDPPEVSNAKLQYAGWGPKG---QQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHI 176 (723)
T ss_dssp CC-EECCCTTCCSCCCSBCCBCSST---TCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSE
T ss_pred ce-EeccCCccccccccccEECCCC---CEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcc
Confidence 86 33332211 3445555543 45666664 799999999988877666554433 7
Q ss_pred EEEEecCCCEEEEEeCCC----------------------------------CEEEEEcCCCeEEEEeeCC-----CCCC
Q 009597 375 TITFVDSNRRFVTSSDDK----------------------------------SLRVWEFGIPVVIKYISEP-----HMHS 415 (531)
Q Consensus 375 ~l~~sp~~~~l~s~s~Dg----------------------------------~I~iwd~~~~~~~~~~~~~-----~~~~ 415 (531)
+++|+|+|++|++++.|+ .|++||+.++.....+..+ +...
T Consensus 177 ~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~ 256 (723)
T 1xfd_A 177 AHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYY 256 (723)
T ss_dssp EEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEE
T ss_pred eEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccce
Confidence 899999999999987653 7999999887654444332 2557
Q ss_pred ccEEEEeCCCCEEEEEEcC----CeEEEEEcCCcceeceeeeecCCccccce----EEEEEcCCCCEEEE--EeCCC---
Q 009597 416 MPSISLHPNTNWLAAQSLD----NQILIYSTRERFQLNKKKRFAGHIVAGYA----CQVNFSPDGRFVMS--GDGEG--- 482 (531)
Q Consensus 416 v~~v~~sp~~~~l~s~s~D----g~I~iwd~~~~~~~~~~~~~~~~~~~~~v----~~l~~spdg~~l~s--gs~dg--- 482 (531)
+..++|+|+|++|++.+.. ..|.+||+.++......... + .+++ ..++|+|||+.|+. +..++
T Consensus 257 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~--~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 332 (723)
T 1xfd_A 257 ITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE--S--EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRG 332 (723)
T ss_dssp EEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE--C--SSCCCCCCCCCEECTTSCSEEEEEEECCSSSS
T ss_pred eEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec--c--CCEEeccCCCceEcCCCCeEEEEEecccCCCc
Confidence 8899999999988776543 57999999887543222111 1 1112 25789999997765 44666
Q ss_pred ---cEEEEE-CCCCe--EEEEeeccCCcEEE-EEEecCCCCEEEEEeCC---CCEEeeC
Q 009597 483 ---KCWFWD-WKSCK--VFRTLKCHEGVCIG-CEWHPLEQSKVATCGWD---GLIKYWD 531 (531)
Q Consensus 483 ---~I~iwd-~~~~~--~~~~~~~h~~~V~~-v~~~p~~~~~l~t~s~D---g~I~iWD 531 (531)
.|++|| ...+. +...+..+...+.. ++|+| ++..|+..+.+ +.++||+
T Consensus 333 ~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 333 KFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDE-KGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp CEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEET-TTTEEEEEESSSCTTCCEEEE
T ss_pred ceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcC-CCCEEEEEEcCCCCcceEEEE
Confidence 577788 34444 14455543444544 69999 66666555444 7888884
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=2.2e-19 Score=179.70 Aligned_cols=232 Identities=10% Similarity=0.083 Sum_probs=175.4
Q ss_pred EEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC--cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEE
Q 009597 289 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK--IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY 366 (531)
Q Consensus 289 ~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~--~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~ 366 (531)
++++++++.++++++.+++|++||+.+++.+..+..+. .+..+.+.++. ..+++++..++.|.+||+.+++.+..+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg--~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDN--RTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCC--CEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 45678888999999999999999999999998887666 56677777643 246667778999999999999888777
Q ss_pred cccC------CCeeEEEEecCCCEEEEEeCC------------CCEEEEEcCCCe---EEEEeeCCCCCCccEEEEeCCC
Q 009597 367 DQHL------GAVNTITFVDSNRRFVTSSDD------------KSLRVWEFGIPV---VIKYISEPHMHSMPSISLHPNT 425 (531)
Q Consensus 367 ~~h~------~~I~~l~~sp~~~~l~s~s~D------------g~I~iwd~~~~~---~~~~~~~~~~~~v~~v~~sp~~ 425 (531)
..+. ..+.+++|+|++++|++++.+ +.|.+||+.++. .+.... +...+.+++|+|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP--MPRQVYLMRAADDG 159 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--CCSSCCCEEECTTS
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc--CCCcccceeECCCC
Confidence 6432 237899999999999998865 899999998742 223332 33468899999999
Q ss_pred CEEEEEEcCCeEEEEEcCCcceeceeeeec-C-------------------C---c------------------------
Q 009597 426 NWLAAQSLDNQILIYSTRERFQLNKKKRFA-G-------------------H---I------------------------ 458 (531)
Q Consensus 426 ~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~-~-------------------~---~------------------------ 458 (531)
+ ++++ ++.|.+||+.++..+..+.... + + .
T Consensus 160 ~-l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 160 S-LYVA--GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp C-EEEE--SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred c-EEEc--cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 9 5554 4459999998765443221100 0 0 0
Q ss_pred ----------------cccceEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEE
Q 009597 459 ----------------VAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521 (531)
Q Consensus 459 ----------------~~~~v~~l~~sp-dg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~ 521 (531)
....+..++|+| +|++|+++ ++.|++||+.+++.+..+..+ ..+.+++|+| ++.+|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~ 312 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDK-KGDKLYLG 312 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECS-SSSCEEEE
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECC-CCCEEEEe
Confidence 001345678889 99999988 889999999999998888743 3467899999 66667778
Q ss_pred eCCCCEEeeC
Q 009597 522 GWDGLIKYWD 531 (531)
Q Consensus 522 s~Dg~I~iWD 531 (531)
+.++.|++||
T Consensus 313 ~~~~~v~v~d 322 (349)
T 1jmx_B 313 GTFNDLAVFN 322 (349)
T ss_dssp SBSSEEEEEE
T ss_pred cCCCeEEEEe
Confidence 8899999997
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=8.6e-20 Score=201.72 Aligned_cols=253 Identities=8% Similarity=0.067 Sum_probs=179.7
Q ss_pred eeeeecccCeee-EEecCcc-----------------CceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCc
Q 009597 266 VEDKSTFHGKCM-RTYMGHS-----------------KAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 327 (531)
Q Consensus 266 i~~~~~~~~~~~-~~l~gH~-----------------~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~ 327 (531)
| +|+..+++.+ +.+..|. ..|.+++|+|| +.++.+. ++.|++||+.+++..........
T Consensus 46 i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~ 122 (706)
T 2z3z_A 46 L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFDTNEE 122 (706)
T ss_dssp E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEECCTTC
T ss_pred E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEccCCccc
Confidence 6 8888888874 4555554 56999999999 6666554 69999999999887766555445
Q ss_pred ceEEEEccCCCCCcEEEEeeCCCeEEEEECCC-----CceeEEEcccCCC--------------eeEEEEecCCCEEEEE
Q 009597 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT-----KEITQEYDQHLGA--------------VNTITFVDSNRRFVTS 388 (531)
Q Consensus 328 ~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t-----~~~~~~~~~h~~~--------------I~~l~~sp~~~~l~s~ 388 (531)
...+.|++++ ..|++ ..++.|++||+.+ ++..+....+... +.++.|+|+|++|+++
T Consensus 123 ~~~~~~SpdG---~~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~ 198 (706)
T 2z3z_A 123 TASLDFSPVG---DRVAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFY 198 (706)
T ss_dssp CTTCEECTTS---SEEEE-EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEE
T ss_pred ccCCcCCCCC---CEEEE-EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEE
Confidence 5556777754 45666 4689999999998 7766655444443 4899999999999998
Q ss_pred e---------------------------------CCCCEEEEEcCCCeEEEEeeC-CCCCCccEEEEeCCCCEEEEEEcC
Q 009597 389 S---------------------------------DDKSLRVWEFGIPVVIKYISE-PHMHSMPSISLHPNTNWLAAQSLD 434 (531)
Q Consensus 389 s---------------------------------~Dg~I~iwd~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~l~s~s~D 434 (531)
+ .+..|++||+.++........ .+...+.+++|+|+|++|++++.+
T Consensus 199 ~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 278 (706)
T 2z3z_A 199 RMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN 278 (706)
T ss_dssp EEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred EECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC
Confidence 7 446799999998876544322 356678999999999999998887
Q ss_pred C-----eEEEEEcCCcceeceeeeecCCccccceEEEEEcC--CCCEEEEEeCCCcEEEEECC-CCeEEEEeeccCCcEE
Q 009597 435 N-----QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP--DGRFVMSGDGEGKCWFWDWK-SCKVFRTLKCHEGVCI 506 (531)
Q Consensus 435 g-----~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp--dg~~l~sgs~dg~I~iwd~~-~~~~~~~~~~h~~~V~ 506 (531)
+ .|.+||+.++.....+...........+..++|+| +|++|++++.+|.++||++. ++..+..+..|...+.
T Consensus 279 ~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~ 358 (706)
T 2z3z_A 279 RAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVT 358 (706)
T ss_dssp TTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEE
T ss_pred CCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEE
Confidence 6 99999998873332222111110001134578999 99999999999999999876 6777888888887787
Q ss_pred E-EEEecCCCCEEEEEeCCC
Q 009597 507 G-CEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 507 ~-v~~~p~~~~~l~t~s~Dg 525 (531)
. ++|+|++..++++++.++
T Consensus 359 ~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 359 NFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp EEEEECTTSSEEEEEESSSC
T ss_pred eeeEEcCCCCEEEEEecCCC
Confidence 6 799994444445555555
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=3.6e-19 Score=177.44 Aligned_cols=233 Identities=12% Similarity=0.114 Sum_probs=170.3
Q ss_pred EEEccCCC-EEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCce-eEEEc
Q 009597 290 ISFCNDGT-KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI-TQEYD 367 (531)
Q Consensus 290 l~fspdg~-~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~-~~~~~ 367 (531)
..|.+++. .+++++.++.|.+||+.+++.+..+..+.....+.++++. ..+++++..++.|.+||+.+++. ...+.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDC--SNVVVTSDFCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSS--CEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCC--CEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence 34566554 4778888999999999999998887765444455565543 34566666689999999999988 77777
Q ss_pred ccCCCeeEEEEecCCCEEEEEeCCC---CEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEE-EcCCe-EEEEEc
Q 009597 368 QHLGAVNTITFVDSNRRFVTSSDDK---SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQ-SLDNQ-ILIYST 442 (531)
Q Consensus 368 ~h~~~I~~l~~sp~~~~l~s~s~Dg---~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~-s~Dg~-I~iwd~ 442 (531)
.+..++.+++|+|++++++++..++ .|.+||+.++..+..+.. .....+++|+|+|++|+++ ..++. |.+|++
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 7777776699999999999555553 899999999988777653 4456899999999866555 45578 999998
Q ss_pred CCcceecee--eeecCCccccceEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeE---EEEeeccCCcEEEEEEecCCCC
Q 009597 443 RERFQLNKK--KRFAGHIVAGYACQVNFSPDGRFVMSG-DGEGKCWFWDWKSCKV---FRTLKCHEGVCIGCEWHPLEQS 516 (531)
Q Consensus 443 ~~~~~~~~~--~~~~~~~~~~~v~~l~~spdg~~l~sg-s~dg~I~iwd~~~~~~---~~~~~~h~~~V~~v~~~p~~~~ 516 (531)
.....+... ..+.. ...+..++|+|+|++|+++ ..++.|++||+.+++. +..+..+ ..+..++|+| ++.
T Consensus 159 ~~~g~~~~~~~~~~~~---~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~sp-dg~ 233 (331)
T 3u4y_A 159 DADGVLFDTGQEFISG---GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSR-DGS 233 (331)
T ss_dssp CTTCCEEEEEEEEECS---SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECT-TSS
T ss_pred CCCCcEeecCCccccC---CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECC-CCC
Confidence 754322111 11111 2346789999999966554 4688999999999887 7777744 5568899999 666
Q ss_pred EE-EEEeCCCCEEeeC
Q 009597 517 KV-ATCGWDGLIKYWD 531 (531)
Q Consensus 517 ~l-~t~s~Dg~I~iWD 531 (531)
+| +++..++.|.+||
T Consensus 234 ~l~v~~~~~~~i~~~d 249 (331)
T 3u4y_A 234 TVYVLTESTVDVFNFN 249 (331)
T ss_dssp EEEEECSSEEEEEEEE
T ss_pred EEEEEEcCCCEEEEEE
Confidence 44 4555678899986
No 143
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=3.2e-18 Score=173.17 Aligned_cols=262 Identities=8% Similarity=0.105 Sum_probs=172.6
Q ss_pred CCceeeeee--cccCeeeEEecCccCceEEEEEccCCCEEEEEecC----CeEEEEeCCC--CcE--EEEcc-CCCcceE
Q 009597 262 KGEHVEDKS--TFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYD----KNIKYWDTET--GQV--IRTFS-TGKIPYV 330 (531)
Q Consensus 262 ~~~~i~~~~--~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~D----g~I~vWd~~t--~~~--i~~~~-~~~~~~~ 330 (531)
.++.+.+|. ..+++.......|...+..++|+|||++|++++.+ +.|.+|++.. ++. +..+. ....+..
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~ 104 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCY 104 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEE
T ss_pred CCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEE
Confidence 344555554 44554433322278889999999999999999886 7999998765 443 33332 2223333
Q ss_pred EEEccCCCCCcEEEEeeCCCeEEEEECCCCceeE----EE--cc--------cCCCeeEEEEecCCCEEEEEe-CCCCEE
Q 009597 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ----EY--DQ--------HLGAVNTITFVDSNRRFVTSS-DDKSLR 395 (531)
Q Consensus 331 ~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~----~~--~~--------h~~~I~~l~~sp~~~~l~s~s-~Dg~I~ 395 (531)
+.+ +...++++...++.|.+|++.....+. .+ .+ +...+.+++|+|+++++++++ .++.|+
T Consensus 105 ~~~----dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~ 180 (361)
T 3scy_A 105 LTT----NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH 180 (361)
T ss_dssp EEE----CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEE----CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE
Confidence 343 233455555578999999997543221 11 11 123457899999999776655 478999
Q ss_pred EEEcCCCeE------E------EEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEEEEEcCCcceeceeeeecCC-cccc
Q 009597 396 VWEFGIPVV------I------KYISEPHMHSMPSISLHPNTNWLAAQS-LDNQILIYSTRERFQLNKKKRFAGH-IVAG 461 (531)
Q Consensus 396 iwd~~~~~~------~------~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~~~~~-~~~~ 461 (531)
+|++..... + ..........+..++|+|+|++|++++ .++.|.+|++.++.. .....+... ....
T Consensus 181 v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~-~~~~~~~~~~~~~~ 259 (361)
T 3scy_A 181 KFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML-DEIQTVAADTVNAQ 259 (361)
T ss_dssp EEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE-EEEEEEESCSSCCC
T ss_pred EEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce-EEeEEEecCCCCCC
Confidence 999875331 1 223333455678999999999888877 689999999986532 112222111 1112
Q ss_pred ceEEEEEcCCCCEEEEEeC--CCcEEEEECC--CCe--EEEEeeccCCcEEEEEEecCCCCEEEEEe-CCCCEEee
Q 009597 462 YACQVNFSPDGRFVMSGDG--EGKCWFWDWK--SCK--VFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYW 530 (531)
Q Consensus 462 ~v~~l~~spdg~~l~sgs~--dg~I~iwd~~--~~~--~~~~~~~h~~~V~~v~~~p~~~~~l~t~s-~Dg~I~iW 530 (531)
....++|+|||++|+++.. ++.|.+|++. +++ .+..+.. ...+.+++|+| ++++|++++ .++.|.+|
T Consensus 260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~sp-dg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITP-NGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECT-TSCEEEEEETTTTEEEEE
T ss_pred CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECC-CCCEEEEEECCCCCEEEE
Confidence 3567999999999977665 4899999985 444 4555554 45678999999 666666666 67889986
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=2.1e-19 Score=199.67 Aligned_cols=236 Identities=11% Similarity=0.082 Sum_probs=180.4
Q ss_pred cCceEEEEEccCCCEEEEEec-CC-----eEEEEeCCCCcEEEEccCCCc-------------------------ceEEE
Q 009597 284 SKAVRDISFCNDGTKFLTASY-DK-----NIKYWDTETGQVIRTFSTGKI-------------------------PYVVK 332 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~-Dg-----~I~vWd~~t~~~i~~~~~~~~-------------------------~~~~~ 332 (531)
...|.+++|+|||++|++++. |+ .|++||+.+++....+..... ...+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 999999999988766643221 34455
Q ss_pred EccCCCCCcEEEEeeCCCeEEEEECCCCc--eeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeC
Q 009597 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKE--ITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISE 410 (531)
Q Consensus 333 ~~~~~~~~~~l~sg~~dg~I~iwd~~t~~--~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~ 410 (531)
|++++ ..|++++. +.|++||+.++. .+..+..|...+.+++|+|+|++|++++. +.|++||+.++........
T Consensus 116 ~SpDg---~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 116 WSPDA---QRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp ECTTS---SEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCC
T ss_pred ECCCC---CEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccC
Confidence 55543 46666665 999999999883 44556678889999999999999999884 5899999998876544332
Q ss_pred CCCC----------------CccEEEEeCCCCEEEEEEcCC---------------------------------eEEEEE
Q 009597 411 PHMH----------------SMPSISLHPNTNWLAAQSLDN---------------------------------QILIYS 441 (531)
Q Consensus 411 ~~~~----------------~v~~v~~sp~~~~l~s~s~Dg---------------------------------~I~iwd 441 (531)
+.. .+.+++|+|+|++|++++.|+ .|.+||
T Consensus 191 -~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 191 -GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp -CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred -CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 222 147899999999999998776 788999
Q ss_pred cCC-cceeceeeeecCCccccceEEEEEcCCCCEEEEEeC-----CCcEEEEECCCCeEEEEeeccCC----cEEEEEEe
Q 009597 442 TRE-RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG-----EGKCWFWDWKSCKVFRTLKCHEG----VCIGCEWH 511 (531)
Q Consensus 442 ~~~-~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~-----dg~I~iwd~~~~~~~~~~~~h~~----~V~~v~~~ 511 (531)
+.+ +.... + ..+......+..++| |||++|++++. +..|++||+.++++...+..|.. .+..++|+
T Consensus 270 ~~~~~~~~~-~--~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 270 PAEQAQTQW-I--DLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp SSTTCCCEE-E--CCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC
T ss_pred CCCCCceEE-e--cCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC
Confidence 877 64321 1 111112456888999 99999997654 56799999999988877766553 34688999
Q ss_pred cCCCCEEEEEeCCCCEEee
Q 009597 512 PLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 512 p~~~~~l~t~s~Dg~I~iW 530 (531)
| +++++++++.||.++||
T Consensus 346 p-dg~~~~~~~~~g~~~l~ 363 (741)
T 2ecf_A 346 D-DGSILWSSERTGFQHLY 363 (741)
T ss_dssp T-TSCEEEEECTTSSCEEE
T ss_pred C-CCeEEEEecCCCccEEE
Confidence 9 56699999999988777
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.80 E-value=6.2e-18 Score=186.79 Aligned_cols=255 Identities=10% Similarity=0.102 Sum_probs=183.4
Q ss_pred ceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCC-----CcEEEEccCCCc-----------
Q 009597 264 EHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-----GQVIRTFSTGKI----------- 327 (531)
Q Consensus 264 ~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t-----~~~i~~~~~~~~----------- 327 (531)
+.+++|+..++++.. +..|...+.+++|+|||++|+++ .|+.|++||+.+ ++.......+..
T Consensus 101 ~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 101 GGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp TEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred CEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 789999988776654 45577889999999999999985 589999999998 877655443333
Q ss_pred ----ceEEEEccCCCCCcEEEEee---------------------------------CCCeEEEEECCCCceeEEEc--c
Q 009597 328 ----PYVVKLNPDDDKQNILLAGM---------------------------------SDKKIVQWDMNTKEITQEYD--Q 368 (531)
Q Consensus 328 ----~~~~~~~~~~~~~~~l~sg~---------------------------------~dg~I~iwd~~t~~~~~~~~--~ 368 (531)
...+.|++++ ..|++++ .+..|++||+.+++...... .
T Consensus 179 e~~~~~~~~~SpDg---~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 255 (706)
T 2z3z_A 179 EFGIEKGTFWSPKG---SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP 255 (706)
T ss_dssp CTTCCCSEEECTTS---SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC
T ss_pred hcCCCceEEECCCC---CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC
Confidence 2455666643 4566665 45789999999887655442 4
Q ss_pred cCCCeeEEEEecCCCEEEEEeCCC-----CEEEEEcCCCeEEEEee-CCCCC---CccEEEEeC--CCCEEEEEEcCCeE
Q 009597 369 HLGAVNTITFVDSNRRFVTSSDDK-----SLRVWEFGIPVVIKYIS-EPHMH---SMPSISLHP--NTNWLAAQSLDNQI 437 (531)
Q Consensus 369 h~~~I~~l~~sp~~~~l~s~s~Dg-----~I~iwd~~~~~~~~~~~-~~~~~---~v~~v~~sp--~~~~l~s~s~Dg~I 437 (531)
|...+.+++|+|++++|++++.++ .|++||+.++.....+. ..+.. .+.+++|+| +|++|++++.++.+
T Consensus 256 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~ 335 (706)
T 2z3z_A 256 KEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWN 335 (706)
T ss_dssp TTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSC
T ss_pred CceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCcc
Confidence 667899999999999999988776 89999999983333332 21222 347789999 99999999999999
Q ss_pred EEEEcC-CcceeceeeeecCCccccceEE-EEEcCCCCEEEEEeC-CC----cEEEEECCCCeEEEEeeccCCcEEEEEE
Q 009597 438 LIYSTR-ERFQLNKKKRFAGHIVAGYACQ-VNFSPDGRFVMSGDG-EG----KCWFWDWKSCKVFRTLKCHEGVCIGCEW 510 (531)
Q Consensus 438 ~iwd~~-~~~~~~~~~~~~~~~~~~~v~~-l~~spdg~~l~sgs~-dg----~I~iwd~~~~~~~~~~~~h~~~V~~v~~ 510 (531)
.||.+. ++..+ ..+..+. ..+.. ++|+|+|+.|+.++. ++ .|+.||+.+++ ...+. |...+.+++|
T Consensus 336 ~l~~~~~~~~~~---~~l~~~~--~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~ 408 (706)
T 2z3z_A 336 HLYLYDTTGRLI---RQVTKGE--WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQL 408 (706)
T ss_dssp EEEEEETTSCEE---EECCCSS--SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEE
T ss_pred EEEEEECCCCEE---EecCCCC--eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEE
Confidence 999876 33322 2333332 33554 799999998866554 44 67788887766 34443 6677899999
Q ss_pred ecCCCCEEEEE-eCC---CCEEeeC
Q 009597 511 HPLEQSKVATC-GWD---GLIKYWD 531 (531)
Q Consensus 511 ~p~~~~~l~t~-s~D---g~I~iWD 531 (531)
+| ++.+|+.. +.+ +.|++||
T Consensus 409 sp-dg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 409 SP-DGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp CT-TSSEEEEEEECSSCSCEEEEEE
T ss_pred CC-CCCEEEEEecCCCCCcEEEEEE
Confidence 99 55555554 433 4588886
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=3.1e-18 Score=166.37 Aligned_cols=219 Identities=13% Similarity=0.119 Sum_probs=163.4
Q ss_pred EEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC-CceeEEEccc-CCCeeEEEE
Q 009597 301 TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT-KEITQEYDQH-LGAVNTITF 378 (531)
Q Consensus 301 s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t-~~~~~~~~~h-~~~I~~l~~ 378 (531)
+++.|+.|++||+.+++.............+.++++. .+|++++ ++.|++||+.+ ++....+..| ...+.+++|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDG---KYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTS---SEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCC---CEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 4567899999999999888777666667778887754 4666665 88999999999 8877766665 378899999
Q ss_pred ecCCCEEEEEe--CCCCEEEEEc--CCCeEEEEeeCCCCCCccEEEEeCCCCEEE-EEEcCCeEEEEEcCCcceeceeee
Q 009597 379 VDSNRRFVTSS--DDKSLRVWEF--GIPVVIKYISEPHMHSMPSISLHPNTNWLA-AQSLDNQILIYSTRERFQLNKKKR 453 (531)
Q Consensus 379 sp~~~~l~s~s--~Dg~I~iwd~--~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~-s~s~Dg~I~iwd~~~~~~~~~~~~ 453 (531)
+|++++|++++ .++.+.||.+ ..+. ...+. ....+..++|+|++++|+ +++.++.+.||++..... ....
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~~~ 167 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VETR 167 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC--SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--CEEE
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee--cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC--cceE
Confidence 99999999998 3455566554 4444 23332 233488899999999887 778899999998643211 1122
Q ss_pred ecCCccccceEEEEEcCCCCEEEEEe-CCCcEEEEECC-CCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCC-------
Q 009597 454 FAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWK-SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD------- 524 (531)
Q Consensus 454 ~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~-~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~D------- 524 (531)
+..+ ...+.+++|+|+|++|+.++ .++.+.||++. .+..+..+..|...+.+++|+| ++.+|++++.+
T Consensus 168 ~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 168 LTHG--EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp CCCS--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECT-TSSEEEEEEEETTCCSCC
T ss_pred cccC--CCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECC-CCCEEEEEEcCCCCCccc
Confidence 3333 34578899999999888766 58899999886 5566777888888899999999 77777777765
Q ss_pred ----CCEEeeC
Q 009597 525 ----GLIKYWD 531 (531)
Q Consensus 525 ----g~I~iWD 531 (531)
+.|++||
T Consensus 245 ~~~~~~l~~~d 255 (297)
T 2ojh_A 245 RDLDVRVQLMD 255 (297)
T ss_dssp SSEEEEEEEEE
T ss_pred ccCceEEEEEe
Confidence 4588886
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.80 E-value=8.4e-18 Score=167.57 Aligned_cols=226 Identities=12% Similarity=0.199 Sum_probs=156.3
Q ss_pred EEEEEecCCeEEEEeCC-CC--cEEEEccCCCcceEEEEccCCCCCcEEEEeeCC-CeEEEEECC--CCc--eeEEEccc
Q 009597 298 KFLTASYDKNIKYWDTE-TG--QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD-KKIVQWDMN--TKE--ITQEYDQH 369 (531)
Q Consensus 298 ~l~s~s~Dg~I~vWd~~-t~--~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-g~I~iwd~~--t~~--~~~~~~~h 369 (531)
.+++++.|+.|++|++. ++ +.+..+.....+..+.++++. ..|++++.+ +.|.+|++. +++ .+..+..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDK---RYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTS---SEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCC---CEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 44555789999999985 34 345556566667777777743 456666655 999999997 554 34455544
Q ss_pred CCCeeEEEEecCCCEEEEEeC-CCCEEEEEcC---CCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEEEEEcCC
Q 009597 370 LGAVNTITFVDSNRRFVTSSD-DKSLRVWEFG---IPVVIKYISEPHMHSMPSISLHPNTNWLAAQS-LDNQILIYSTRE 444 (531)
Q Consensus 370 ~~~I~~l~~sp~~~~l~s~s~-Dg~I~iwd~~---~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~~ 444 (531)
. .+.+++|+|++++|++++. ++.|.+||+. ....+..+. ....+.+++|+|++++|++++ .++.|.+||+..
T Consensus 84 ~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 84 G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE--GLDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC--CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc--CCCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 3 8899999999998877665 7889999994 333333332 344688999999999888888 899999999986
Q ss_pred cceeceee--eecCCccccceEEEEEcCCCCEEEEEe-CCCcEEEEECCC--CeE--EEEee----cc--CCcEEEEEEe
Q 009597 445 RFQLNKKK--RFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKS--CKV--FRTLK----CH--EGVCIGCEWH 511 (531)
Q Consensus 445 ~~~~~~~~--~~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~--~~~--~~~~~----~h--~~~V~~v~~~ 511 (531)
...+.... ....+. ...+..++|+|+|++|++++ .++.|.+|++.. ++. ...+. .+ ...+..++|+
T Consensus 161 ~~~~~~~~~~~~~~~~-~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVE-GAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp TSCEEEEEEEEEECST-TCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred CCceeeecccccccCC-CCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEEC
Confidence 22222211 122221 23577799999999776554 789999999953 432 22332 11 2356789999
Q ss_pred cCCCCEEE-EEeCCCCEEeeC
Q 009597 512 PLEQSKVA-TCGWDGLIKYWD 531 (531)
Q Consensus 512 p~~~~~l~-t~s~Dg~I~iWD 531 (531)
| ++.+|+ ++..++.|++||
T Consensus 240 ~-dg~~l~v~~~~~~~i~v~d 259 (343)
T 1ri6_A 240 P-DGRHLYACDRTASLITVFS 259 (343)
T ss_dssp T-TSSEEEEEETTTTEEEEEE
T ss_pred C-CCCEEEEEecCCCEEEEEE
Confidence 9 555554 666899999996
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=4.1e-18 Score=184.10 Aligned_cols=231 Identities=10% Similarity=0.089 Sum_probs=167.4
Q ss_pred cCceEEEEEccCCCEEEEEec-CCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeC---CCeEEEEECCC
Q 009597 284 SKAVRDISFCNDGTKFLTASY-DKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMS---DKKIVQWDMNT 359 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~-Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~---dg~I~iwd~~t 359 (531)
..+|.+++|+|||++|++++. ||+++||++.+++.. .+..++...+....++++ .++++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEec
Confidence 557999999999999999887 999999999666554 444444334444444443 56776664 45555654432
Q ss_pred ---CceeEEEcccCCCeeEEEEecCCCE-EEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcC-
Q 009597 360 ---KEITQEYDQHLGAVNTITFVDSNRR-FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD- 434 (531)
Q Consensus 360 ---~~~~~~~~~h~~~I~~l~~sp~~~~-l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~D- 434 (531)
+... .+..+ ..+...+|+|+++. +++++.++.+.+||+.++........ +. .+++|+|+|++|++++.+
T Consensus 98 ~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~-~~---~~~~~spDG~~la~~~~~~ 171 (582)
T 3o4h_A 98 SRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARL-PG---FGFVSDIRGDLIAGLGFFG 171 (582)
T ss_dssp TSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE-SS---CEEEEEEETTEEEEEEEEE
T ss_pred cCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecC-CC---ceEEECCCCCEEEEEEEcC
Confidence 2222 34322 33457788988863 33444445566999998876554432 22 899999999999988877
Q ss_pred ---CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCC--cEEEEECCCCeEEEEeeccCCcEEEEE
Q 009597 435 ---NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG--KCWFWDWKSCKVFRTLKCHEGVCIGCE 509 (531)
Q Consensus 435 ---g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg--~I~iwd~~~~~~~~~~~~h~~~V~~v~ 509 (531)
+.|.+||+.++... .+..+ ...+..++|||||++|++++.++ .|++||+.+++.. .+..|...+..++
T Consensus 172 ~~~~~i~~~d~~~g~~~----~l~~~--~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGGLR----VFDSG--EGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYR 244 (582)
T ss_dssp TTEEEEEEEETTTCCCE----EECCS--SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHC
T ss_pred CCCeEEEEEcCCCCCce----EeecC--CCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhh
Confidence 78999998876432 34444 34578899999999999888888 8999999998887 7777877776677
Q ss_pred --------EecCCCCEEEEEeCCCCEEeeC
Q 009597 510 --------WHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 510 --------~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|+| ++.++++++.||.+++|+
T Consensus 245 ~~~~~~~~~sp-dg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 245 PTAITWLGYLP-DGRLAVVARREGRSAVFI 273 (582)
T ss_dssp CSEEEEEEECT-TSCEEEEEEETTEEEEEE
T ss_pred hccccceeEcC-CCcEEEEEEcCCcEEEEE
Confidence 999 458999999999999995
No 149
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=1.4e-17 Score=169.24 Aligned_cols=246 Identities=12% Similarity=0.141 Sum_probs=166.8
Q ss_pred ccCceEEEEEccCCCEEEEEecCCeEEEEeCC-CCcEEEEccC--CCcceEEEEccCCCCCc-EEEEee-----------
Q 009597 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTE-TGQVIRTFST--GKIPYVVKLNPDDDKQN-ILLAGM----------- 347 (531)
Q Consensus 283 H~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~-t~~~i~~~~~--~~~~~~~~~~~~~~~~~-~l~sg~----------- 347 (531)
+...+..++|+|+|++|++++.+ .|.+|++. +++....... ...+..+.+++ +... +++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp--dg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT--NTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS--CCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC--CCCEEEEEEecCCcceecccee
Confidence 44578899999999999999988 99999997 7776543321 12222233333 3222 344543
Q ss_pred --CCCeEEEEECC-CCceeEEEc----ccCCCeeEEEEecCCCEEEEEeC-CCCEEEEEcC-CCeEE--EEeeCC-CCCC
Q 009597 348 --SDKKIVQWDMN-TKEITQEYD----QHLGAVNTITFVDSNRRFVTSSD-DKSLRVWEFG-IPVVI--KYISEP-HMHS 415 (531)
Q Consensus 348 --~dg~I~iwd~~-t~~~~~~~~----~h~~~I~~l~~sp~~~~l~s~s~-Dg~I~iwd~~-~~~~~--~~~~~~-~~~~ 415 (531)
.++.+.+|++. .++....+. .+...+.+++|+|+|++|++++. ++.|++||+. +++.. ..+..+ +...
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~ 194 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCC
Confidence 68999999997 466544443 24567999999999998887764 6789999998 66543 223222 3566
Q ss_pred ccEEEEeCCCCEEEEEEc-CCeEEEEEcC--Cccee---ceeeeecCCcc--cc------ceEEEE-EcCCCCEEEEEeC
Q 009597 416 MPSISLHPNTNWLAAQSL-DNQILIYSTR--ERFQL---NKKKRFAGHIV--AG------YACQVN-FSPDGRFVMSGDG 480 (531)
Q Consensus 416 v~~v~~sp~~~~l~s~s~-Dg~I~iwd~~--~~~~~---~~~~~~~~~~~--~~------~v~~l~-~spdg~~l~sgs~ 480 (531)
+..++|+|+|++|++++. ++.|.+|++. ++... ..+..+..... .. .+..++ |+|||++|++++.
T Consensus 195 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 889999999999988775 6899999865 33221 11222221100 11 477899 9999999887764
Q ss_pred CC------cEEEEECC-CCeEEE---EeeccCCcEEEEEEecC--CCCEEEEEeC-CCCEEeeC
Q 009597 481 EG------KCWFWDWK-SCKVFR---TLKCHEGVCIGCEWHPL--EQSKVATCGW-DGLIKYWD 531 (531)
Q Consensus 481 dg------~I~iwd~~-~~~~~~---~~~~h~~~V~~v~~~p~--~~~~l~t~s~-Dg~I~iWD 531 (531)
+. .|.+|++. +++... .+..+...+..++|+|. ++.+|++++. ++.|++|+
T Consensus 275 ~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 275 ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp ESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred CCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEE
Confidence 32 89999986 666543 23334445668899995 4677877776 48999995
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=3.2e-18 Score=185.00 Aligned_cols=259 Identities=10% Similarity=0.003 Sum_probs=184.8
Q ss_pred HhhhhccCCCCCC-CceeeeeecccCeeeEEecCcc-CceEEEEEccCCCEEEEEec---CCeEEEEeCCC---CcEEEE
Q 009597 250 KKKEEKGNAGGEK-GEHVEDKSTFHGKCMRTYMGHS-KAVRDISFCNDGTKFLTASY---DKNIKYWDTET---GQVIRT 321 (531)
Q Consensus 250 ~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~l~gH~-~~V~~l~fspdg~~l~s~s~---Dg~I~vWd~~t---~~~i~~ 321 (531)
.+++++.++..+. ++.+.+|....++. +.+..|. ..|.+++|+|| +++++++. +...+||.+.. +... .
T Consensus 29 ~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~ 105 (582)
T 3o4h_A 29 GVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-R 105 (582)
T ss_dssp EEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-E
T ss_pred cCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-c
Confidence 3466666665443 78889999755554 4555555 68999999999 77777765 45556654432 3322 4
Q ss_pred ccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCC----CCEEEE
Q 009597 322 FSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD----KSLRVW 397 (531)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~D----g~I~iw 397 (531)
+..........+++++. .++++...++.+.+||+.+++..+....+. .+++|+|+|++|++++.+ +.|++|
T Consensus 106 l~~~~~~~~~~~s~dg~--~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~ 180 (582)
T 3o4h_A 106 LEAVKPMRILSGVDTGE--AVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTS 180 (582)
T ss_dssp CTTSCSBEEEEEEECSS--CEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred ccCCCCceeeeeCCCCC--eEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEE
Confidence 54444555667777654 445555555556699999887766554333 899999999999988877 789999
Q ss_pred EcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCC--eEEEEEcCCcceeceeeeecCCccccceEEEE--------
Q 009597 398 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN--QILIYSTRERFQLNKKKRFAGHIVAGYACQVN-------- 467 (531)
Q Consensus 398 d~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~-------- 467 (531)
|+.++... .+ ..+...+..++|+|+|++|+++..++ .|.+||+.++... .+.++. ..+..++
T Consensus 181 d~~~g~~~-~l-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~ 252 (582)
T 3o4h_A 181 NLSSGGLR-VF-DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE----DLELPS--KDFSSYRPTAITWLG 252 (582)
T ss_dssp ETTTCCCE-EE-CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE----ECCCSC--SHHHHHCCSEEEEEE
T ss_pred cCCCCCce-Ee-ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE----EccCCC--cChhhhhhcccccee
Confidence 99887654 33 34677889999999999999888888 8999999876543 233332 1122344
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCC---EEeeC
Q 009597 468 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGL---IKYWD 531 (531)
Q Consensus 468 ~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~---I~iWD 531 (531)
|+|||.++++++.+|.+++|++ ++... .+.+.|.+++|+ ++.++++++.+.. |.+||
T Consensus 253 ~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s--dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 253 YLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW--RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp ECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE--TTEEEEEEEETTEEEEEEEET
T ss_pred EcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec--CCEEEEEEcCCCCCCeEEEEc
Confidence 9999999999999999999999 76654 345678899999 5667788777744 55554
No 151
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.79 E-value=6e-18 Score=176.29 Aligned_cols=204 Identities=12% Similarity=0.010 Sum_probs=148.6
Q ss_pred ccCceEEEEEccCCCEEEEEecCCeEEEEeCCCC----------cEE------EEccCCCcceEEEEccCCCCCcEEE--
Q 009597 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG----------QVI------RTFSTGKIPYVVKLNPDDDKQNILL-- 344 (531)
Q Consensus 283 H~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~----------~~i------~~~~~~~~~~~~~~~~~~~~~~~l~-- 344 (531)
+...+..|++++++.+|++++.|+ |+||+.... ..+ ..+.....+..+.|+++ +.+|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spd---g~~lav~ 110 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCD---NLTLSAC 110 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTT---SCEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCC---CCEEEEE
Confidence 345689999999999999999887 899875311 111 12222333555666654 34666
Q ss_pred --EeeCCCeEEEEECCCC--------ce---eEEEcccCCCeeEEEEecC-CCEEEEEeCCCCEEEEEcCCCeEEEEeeC
Q 009597 345 --AGMSDKKIVQWDMNTK--------EI---TQEYDQHLGAVNTITFVDS-NRRFVTSSDDKSLRVWEFGIPVVIKYISE 410 (531)
Q Consensus 345 --sg~~dg~I~iwd~~t~--------~~---~~~~~~h~~~I~~l~~sp~-~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~ 410 (531)
+|+.|+.|++||+.++ +. +..+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+....
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~- 189 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL- 189 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE-
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc-
Confidence 7889999999998654 22 4555679999999999997 8899999999999999999986654443
Q ss_pred CCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecC--CccccceEEEEEcCCCCEEEEEe-CCC-----
Q 009597 411 PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG--HIVAGYACQVNFSPDGRFVMSGD-GEG----- 482 (531)
Q Consensus 411 ~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~--~~~~~~v~~l~~spdg~~l~sgs-~dg----- 482 (531)
.|...|.+++|+|+|++|++|+.||.|++||++ +........... ......+.+++|++++.++++.+ .+|
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 478899999999999999999999999999998 322221111111 01123688999999988886533 443
Q ss_pred -cEEEEECCCC
Q 009597 483 -KCWFWDWKSC 492 (531)
Q Consensus 483 -~I~iwd~~~~ 492 (531)
.+++|+++..
T Consensus 269 ~~v~i~~l~~~ 279 (434)
T 2oit_A 269 PDVVMALLPKK 279 (434)
T ss_dssp CEEEEEECCCT
T ss_pred CceEEEEeccC
Confidence 3899999854
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.79 E-value=1.4e-18 Score=192.35 Aligned_cols=239 Identities=10% Similarity=0.029 Sum_probs=171.8
Q ss_pred ceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCc----ceEEEEccCCCCCcEEEEeeCC---------CeE
Q 009597 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI----PYVVKLNPDDDKQNILLAGMSD---------KKI 352 (531)
Q Consensus 286 ~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~----~~~~~~~~~~~~~~~l~sg~~d---------g~I 352 (531)
.+.+++|+|||+++++ +.||+|++||+.+++....+..+.. +..+.|++++ ..|++++.+ +.|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg---~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDR---EYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTS---SEEEEEESCCCCSSSCCCSEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCC---CEEEEEecCccceeecceeeE
Confidence 4678999999997766 7899999999999988877765443 5667777753 567777653 789
Q ss_pred EEEECCCCceeEEEc---ccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCC---------------
Q 009597 353 VQWDMNTKEITQEYD---QHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH--------------- 414 (531)
Q Consensus 353 ~iwd~~t~~~~~~~~---~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~--------------- 414 (531)
.+||+.+++. ..+. .|...+..++|+|+|++|+.++. +.|++||+.++........ +..
T Consensus 94 ~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~-~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 94 VLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVST-GKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp EEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECC-CBTTTEEEEECCHHHHHT
T ss_pred EEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecC-CCCCceECcccceeEEEE
Confidence 9999998876 3333 34445899999999999999886 7899999988766554433 222
Q ss_pred ---CccEEEEeCCCCEEEEEEcCC----------------------------------eEEEEEcCCcceeceeeeec-C
Q 009597 415 ---SMPSISLHPNTNWLAAQSLDN----------------------------------QILIYSTRERFQLNKKKRFA-G 456 (531)
Q Consensus 415 ---~v~~v~~sp~~~~l~s~s~Dg----------------------------------~I~iwd~~~~~~~~~~~~~~-~ 456 (531)
.+.+++|+|+|++|++++.++ .|.+||+.++.....+.... .
T Consensus 171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~ 250 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDP 250 (723)
T ss_dssp TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCG
T ss_pred eccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccC
Confidence 237899999999999988653 79999998765322221100 0
Q ss_pred CccccceEEEEEcCCCCEEEEEeC----CCcEEEEECCCCeEEEEeec-cCCcE----EEEEEecCCCCEEEE-EeCCC-
Q 009597 457 HIVAGYACQVNFSPDGRFVMSGDG----EGKCWFWDWKSCKVFRTLKC-HEGVC----IGCEWHPLEQSKVAT-CGWDG- 525 (531)
Q Consensus 457 ~~~~~~v~~l~~spdg~~l~sgs~----dg~I~iwd~~~~~~~~~~~~-h~~~V----~~v~~~p~~~~~l~t-~s~Dg- 525 (531)
......+..++|||||++|++... +..|++||+.++++...+.. |.+.+ ..++|+|++..+++. +..++
T Consensus 251 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 251 RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG 330 (723)
T ss_dssp GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS
T ss_pred CCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC
Confidence 011345788999999999877653 35799999999987776654 33433 378999944444443 55677
Q ss_pred -----CEEeeC
Q 009597 526 -----LIKYWD 531 (531)
Q Consensus 526 -----~I~iWD 531 (531)
.|.+||
T Consensus 331 ~~~~~~l~~~d 341 (723)
T 1xfd_A 331 RGKFYHITVSS 341 (723)
T ss_dssp SSCEEEEEEEC
T ss_pred CcceeEEEEEe
Confidence 466665
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.79 E-value=1.3e-17 Score=192.61 Aligned_cols=256 Identities=10% Similarity=0.089 Sum_probs=196.2
Q ss_pred CCCCCCceeeeeecc-cCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC----------
Q 009597 258 AGGEKGEHVEDKSTF-HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK---------- 326 (531)
Q Consensus 258 ~~~~~~~~i~~~~~~-~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~---------- 326 (531)
..+..++.+.+|... .+...+.+.+|. .+..++|+|||++|+.+. ++.|.+|++...... .+....
T Consensus 218 ~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~ 294 (1045)
T 1k32_A 218 FITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTEKIE-KIEIGDLESPEDRIIS 294 (1045)
T ss_dssp EEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTCCEE-ECCCCCCCBCCSEEEE
T ss_pred EEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCceEee-eeccCccccccccccc
Confidence 334445556666543 255667777776 467889999999998885 899999999554443 554321
Q ss_pred --cceEEEEc-cCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCC-CeeEEEEecCCCEEEEEeCCCCEE-EEEcCC
Q 009597 327 --IPYVVKLN-PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLG-AVNTITFVDSNRRFVTSSDDKSLR-VWEFGI 401 (531)
Q Consensus 327 --~~~~~~~~-~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~-~I~~l~~sp~~~~l~s~s~Dg~I~-iwd~~~ 401 (531)
....+.|+ +++ ..|++++ ++.|.+|++.++... .+..|.. .+.+++|+ +++.|++++.+..|. +||+..
T Consensus 295 ~~~v~~~~~S~pdG---~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~ 368 (1045)
T 1k32_A 295 IPSKFAEDFSPLDG---DLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT 368 (1045)
T ss_dssp CGGGGEEEEEECGG---GCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT
T ss_pred ccccceeeecCCCC---CEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC
Confidence 35667777 654 3455555 889999999887654 4666777 89999999 999999999988888 999987
Q ss_pred CeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC
Q 009597 402 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE 481 (531)
Q Consensus 402 ~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d 481 (531)
+.... +. .+...+..++|+|+|++|++++.++.|++||+.++.... ...+| ...+..++|||||++|++++.+
T Consensus 369 ~~~~~-l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~---~~~~~--~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 369 GKAEK-FE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV---IERSR--EAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp CCEEE-CC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE---EEECS--SSCCCCEEECTTSCEEEEEEEE
T ss_pred CCceE-ec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEE---eccCC--CCCccceEECCCCCeEEEEecC
Confidence 76543 33 577889999999999999999999999999998875432 22234 2446679999999999988765
Q ss_pred C----------cEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 482 G----------KCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 482 g----------~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+ .|++||+.+++ +..+..|...+..++|+| ++..|++++.++..++|+
T Consensus 442 ~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~sp-dG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 442 KHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDA-DSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp CSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECT-TSCEEEEEESCCCCCEEC
T ss_pred ccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcC-CCCEEEEEecccCCcCcc
Confidence 4 89999999988 667778888899999999 778888888887777764
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.78 E-value=4.1e-17 Score=163.13 Aligned_cols=234 Identities=9% Similarity=0.026 Sum_probs=174.9
Q ss_pred hhccCCCCCCCceeeeeecccCeeeEEecCcc-CceEEEEEccCCCEEE-EEecCCeEEEEeCCCCcEEEEccCCCc---
Q 009597 253 EEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHS-KAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKI--- 327 (531)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~-~~V~~l~fspdg~~l~-s~s~Dg~I~vWd~~t~~~i~~~~~~~~--- 327 (531)
.+.+.+.+..++.|.+|+..+++.+..+..+. ..+..++|+|+|++++ ++..++.|.+||+.+++.+..+.....
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE 89 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc
Confidence 34455666678899999999999998887554 2688999999998654 556789999999999998887765432
Q ss_pred ----ceEEEEccCCCCCcEEEEeeCC------------CeEEEEECCCCc---eeEEEcccCCCeeEEEEecCCCEEEEE
Q 009597 328 ----PYVVKLNPDDDKQNILLAGMSD------------KKIVQWDMNTKE---ITQEYDQHLGAVNTITFVDSNRRFVTS 388 (531)
Q Consensus 328 ----~~~~~~~~~~~~~~~l~sg~~d------------g~I~iwd~~t~~---~~~~~~~h~~~I~~l~~sp~~~~l~s~ 388 (531)
+..+.++++. ..+++++.+ +.|.+||+.+++ .+..+.. ...+.+++|+|+++ ++++
T Consensus 90 ~~~~~~~~~~spdg---~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~ 164 (349)
T 1jmx_B 90 VGRSMYSFAISPDG---KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVA 164 (349)
T ss_dssp EEECSSCEEECTTS---SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEE
T ss_pred ccccccceEECCCC---CEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEc
Confidence 4556666643 456666654 899999998844 3344443 34688999999999 5555
Q ss_pred eCCCCEEEEEcCCCeEEEEeeCCC--------------------------------------------------------
Q 009597 389 SDDKSLRVWEFGIPVVIKYISEPH-------------------------------------------------------- 412 (531)
Q Consensus 389 s~Dg~I~iwd~~~~~~~~~~~~~~-------------------------------------------------------- 412 (531)
+. .|.+||+.+++.+..+....
T Consensus 165 ~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 242 (349)
T 1jmx_B 165 GP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKT 242 (349)
T ss_dssp SS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTT
T ss_pred cC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccC
Confidence 43 49999999887766554321
Q ss_pred -----------CCCccEEEEeC-CCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeC
Q 009597 413 -----------MHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 480 (531)
Q Consensus 413 -----------~~~v~~v~~sp-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~ 480 (531)
...+..++|+| ++++++++ ++.|.+||+.++..+.... .. ..+.+++|+|+|++|++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---~~---~~~~~~~~s~dg~~l~~~~~ 314 (349)
T 1jmx_B 243 GKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN---LD---HTYYCVAFDKKGDKLYLGGT 314 (349)
T ss_dssp CCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE---CS---SCCCEEEECSSSSCEEEESB
T ss_pred CcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc---CC---CCccceEECCCCCEEEEecC
Confidence 01334667789 99999888 8999999998875543322 11 22556999999999988888
Q ss_pred CCcEEEEECCCCeEEEEeecc
Q 009597 481 EGKCWFWDWKSCKVFRTLKCH 501 (531)
Q Consensus 481 dg~I~iwd~~~~~~~~~~~~h 501 (531)
++.|++||+.+++.+..+..+
T Consensus 315 ~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 315 FNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp SSEEEEEETTTTEEEEEEECS
T ss_pred CCeEEEEeccccceeeeeecC
Confidence 999999999999999888755
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.78 E-value=1.7e-17 Score=164.99 Aligned_cols=233 Identities=12% Similarity=0.045 Sum_probs=177.3
Q ss_pred CCCCCCCceeeeeecccCeeeEEecC-c----cCceEEEEEccCCCEEEEEe------------cCCeEEEEeCCCCcEE
Q 009597 257 NAGGEKGEHVEDKSTFHGKCMRTYMG-H----SKAVRDISFCNDGTKFLTAS------------YDKNIKYWDTETGQVI 319 (531)
Q Consensus 257 ~~~~~~~~~i~~~~~~~~~~~~~l~g-H----~~~V~~l~fspdg~~l~s~s------------~Dg~I~vWd~~t~~~i 319 (531)
.+....++.+.+|+..+++.+..+.. + ...+.+++|+|+|++|++++ .++.|.+||+.+++.+
T Consensus 49 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 49 YATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred EEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 34445667899999988988877763 2 23688999999999988886 5799999999999998
Q ss_pred EEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCC-------
Q 009597 320 RTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK------- 392 (531)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg------- 392 (531)
..+..+..+..+.++++. ..|+++ ++.|.+||+.+++.+..+..+.. ...+.|+|+++.++.++..+
T Consensus 129 ~~~~~~~~~~~~~~s~dg---~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~ 202 (337)
T 1pby_B 129 KAFEAPRQITMLAWARDG---SKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPF 202 (337)
T ss_dssp EEEECCSSCCCEEECTTS---SCEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEE
T ss_pred EEEeCCCCcceeEECCCC---CEEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeee
Confidence 888777667777777754 335555 68999999999998887765541 11337889888765544332
Q ss_pred -----------------CEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeec
Q 009597 393 -----------------SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 455 (531)
Q Consensus 393 -----------------~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~ 455 (531)
.|.+||+.+++.......++...+.+++|+|++++|+++ ++.|.+||+.++..+....
T Consensus 203 ~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~--- 277 (337)
T 1pby_B 203 YTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP--- 277 (337)
T ss_dssp EEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE---
T ss_pred eccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec---
Confidence 468999998876533233455677889999999999888 7999999998875543322
Q ss_pred CCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCC
Q 009597 456 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503 (531)
Q Consensus 456 ~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~ 503 (531)
.. ..+.+++|+|+|++|++++.++.|++||+.+++.+..+..+.+
T Consensus 278 ~~---~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 278 LP---HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN 322 (337)
T ss_dssp CS---SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred CC---CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence 11 2356799999999999999999999999999999988876543
No 156
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=3.6e-16 Score=152.70 Aligned_cols=239 Identities=11% Similarity=0.215 Sum_probs=174.6
Q ss_pred cCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-------CcceEEEEccCCCCCcEEEEeeC-CCeE
Q 009597 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-------KIPYVVKLNPDDDKQNILLAGMS-DKKI 352 (531)
Q Consensus 281 ~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-------~~~~~~~~~~~~~~~~~l~sg~~-dg~I 352 (531)
.+|-..+.+|+++++++++++.+.++.|.+||.. ++.+..+... ..+..+.+ ....+.++++... ++.|
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~--~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAV--VRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEE--ETTTTEEEEEECGGGCEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEE--EcCCCeEEEEcCCCCCEE
Confidence 3566789999999999988888889999999987 6666666421 12334444 2233456666543 8999
Q ss_pred EEEECCCCceeEEEcc-cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeC-CCCCCccEEEEeCCCCEEEE
Q 009597 353 VQWDMNTKEITQEYDQ-HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISE-PHMHSMPSISLHPNTNWLAA 430 (531)
Q Consensus 353 ~iwd~~t~~~~~~~~~-h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~l~s 430 (531)
.+|| .+++.+..+.. +...+.++++.++++++++...++.|.+||... ..+..+.. .+...+..++++|+++++++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence 9999 56777776643 446789999999999888888889999999754 44444432 34456889999999998887
Q ss_pred EEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCC-cEEEEECCCCeEEEEeeccCC--cEEE
Q 009597 431 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG-KCWFWDWKSCKVFRTLKCHEG--VCIG 507 (531)
Q Consensus 431 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg-~I~iwd~~~~~~~~~~~~h~~--~V~~ 507 (531)
...++.|.+|+.... .+ ..+..+.....+..++++++|+++++...++ .|.+||. .++.+..+..+.. .+.+
T Consensus 181 ~~~~~~i~~~~~~g~-~~---~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 181 DNRAHCVKVFNYEGQ-YL---RQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFD 255 (286)
T ss_dssp EGGGTEEEEEETTCC-EE---EEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEE
T ss_pred ECCCCEEEEEcCCCC-EE---EEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCccee
Confidence 778999999997543 22 2222221124577899999999988888776 9999994 5677777765543 4789
Q ss_pred EEEecCCCCEEEEEeCCCCEEeeC
Q 009597 508 CEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 508 v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++++| ++.++++ +.|+.|++|+
T Consensus 256 i~~~~-~g~l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 256 VALMD-DGSVVLA-SKDYRLYIYR 277 (286)
T ss_dssp EEEET-TTEEEEE-ETTTEEEEEE
T ss_pred EEECC-CCcEEEE-CCCCeEEEEE
Confidence 99999 6666666 6799999995
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=2.5e-18 Score=179.25 Aligned_cols=209 Identities=10% Similarity=0.112 Sum_probs=148.0
Q ss_pred CeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC----------ceeEE-----EcccC
Q 009597 306 KNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK----------EITQE-----YDQHL 370 (531)
Q Consensus 306 g~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~----------~~~~~-----~~~h~ 370 (531)
+.+++|+.... + .......+.+.+. ..++++++.++ |++|+.... ..+.. ...+.
T Consensus 23 ~~vri~~~~~~-----~-~~~~~n~lavs~~---~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (434)
T 2oit_A 23 KKVRIFDSPEE-----L-PKERSSLLAVSNK---YGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMK 92 (434)
T ss_dssp CEEECSCCCSS-----C-CCSCCBCEEEETT---TTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCS
T ss_pred eeEEecCCccc-----c-CCCCccEEEEecC---CCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCC
Confidence 46777764311 1 1223445555553 35788888887 888875210 01111 12356
Q ss_pred CCeeEEEEecCCCEEE----EEeCCCCEEEEEcCCC--------eE--EEEeeCCCCCCccEEEEeCC-CCEEEEEEcCC
Q 009597 371 GAVNTITFVDSNRRFV----TSSDDKSLRVWEFGIP--------VV--IKYISEPHMHSMPSISLHPN-TNWLAAQSLDN 435 (531)
Q Consensus 371 ~~I~~l~~sp~~~~l~----s~s~Dg~I~iwd~~~~--------~~--~~~~~~~~~~~v~~v~~sp~-~~~l~s~s~Dg 435 (531)
..|.+++|+|++++|+ +++.|+.|+|||+.+. +. .......|...|.+++|+|+ +.+|++++.||
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 7899999999999999 7888999999998653 11 12233458889999999997 89999999999
Q ss_pred eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccC-------CcEEEE
Q 009597 436 QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE-------GVCIGC 508 (531)
Q Consensus 436 ~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~-------~~V~~v 508 (531)
+|++||++++..+ ....+| ...+++++|+|+|++|++|+.||.|++||.+ ++....+..|. ..|.++
T Consensus 173 ~v~iwD~~~~~~~---~~~~~~--~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 173 SIAVLQVTETVKV---CATLPS--TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp CEEEEEESSSEEE---EEEECG--GGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEE
T ss_pred eEEEEEcCCCcce---eeccCC--CCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEE
Confidence 9999999987432 233344 3569999999999999999999999999998 66666665442 379999
Q ss_pred EEecCCCCEEEE-EeCCCC------EEeeC
Q 009597 509 EWHPLEQSKVAT-CGWDGL------IKYWD 531 (531)
Q Consensus 509 ~~~p~~~~~l~t-~s~Dg~------I~iWD 531 (531)
+|++ +..++++ ++.||. +++||
T Consensus 247 ~w~~-~~~~l~~~~~~dg~~~~~~~v~i~~ 275 (434)
T 2oit_A 247 LWIG-TYVFAIVYAAADGTLETSPDVVMAL 275 (434)
T ss_dssp EEEE-TTEEEEEEEETTCCSSSCCEEEEEE
T ss_pred EEec-CceEEEEEccCCCccCCCCceEEEE
Confidence 9999 5555543 445543 77775
No 158
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.77 E-value=2.2e-17 Score=190.59 Aligned_cols=240 Identities=13% Similarity=0.123 Sum_probs=187.5
Q ss_pred eeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCC-CcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEE
Q 009597 275 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 353 (531)
Q Consensus 275 ~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t-~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~ 353 (531)
.....+.+|...|.++.|+++ .++++++.|+.++||.+.. +.....+..+.......+++++ ..|+.+ .++.|.
T Consensus 194 ~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG---~~la~~-~~~~i~ 268 (1045)
T 1k32_A 194 GAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDG---RRILFS-KGGSIY 268 (1045)
T ss_dssp TEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESS---SCEEEE-ETTEEE
T ss_pred CCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCC---CEEEEE-eCCEEE
Confidence 445566899999999999988 6677888899999997653 4444555555555566777654 345555 589999
Q ss_pred EEECCCCceeEEEcc-----------cCCCeeEEEEe-cCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCC-CccEEE
Q 009597 354 QWDMNTKEITQEYDQ-----------HLGAVNTITFV-DSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH-SMPSIS 420 (531)
Q Consensus 354 iwd~~t~~~~~~~~~-----------h~~~I~~l~~s-p~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~-~v~~v~ 420 (531)
+||+..... ..+.. |...+.+++|+ |+|++|++++ ++.|.+|++..+.... +. .+.. .+..++
T Consensus 269 ~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~-~~~~~~~~~~~ 344 (1045)
T 1k32_A 269 IFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VP-EPLRIRYVRRG 344 (1045)
T ss_dssp EECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CS-CCSCEEEEEEC
T ss_pred EecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-cc-CCCcceEEeee
Confidence 999954443 35544 34579999999 9999999888 7889999998876543 32 3555 789999
Q ss_pred EeCCCCEEEEEEcCCeEE-EEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009597 421 LHPNTNWLAAQSLDNQIL-IYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499 (531)
Q Consensus 421 ~sp~~~~l~s~s~Dg~I~-iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~ 499 (531)
|+ +|+.|+.++.++.|. +|++..+... .+.++ ...+..++|+|||++|++++.++.|++||+.+++....+.
T Consensus 345 ~s-dg~~l~~~s~~~~l~~~~d~~~~~~~----~l~~~--~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~ 417 (1045)
T 1k32_A 345 GD-TKVAFIHGTREGDFLGIYDYRTGKAE----KFEEN--LGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 417 (1045)
T ss_dssp SS-SEEEEEEEETTEEEEEEEETTTCCEE----ECCCC--CCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred Ec-CCCeEEEEECCCceEEEEECCCCCce----EecCC--ccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc
Confidence 99 999999999888898 9998765322 22244 3457889999999999999999999999999999888887
Q ss_pred ccCCcEEEEEEecCCCCEEEEEeCCC----------CEEeeC
Q 009597 500 CHEGVCIGCEWHPLEQSKVATCGWDG----------LIKYWD 531 (531)
Q Consensus 500 ~h~~~V~~v~~~p~~~~~l~t~s~Dg----------~I~iWD 531 (531)
.|.+.+.+++|+| ++.+|++++.++ .|++||
T Consensus 418 ~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 418 SREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp CSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred CCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEE
Confidence 8999999999999 777888777654 899996
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.75 E-value=2.8e-17 Score=167.50 Aligned_cols=276 Identities=9% Similarity=-0.034 Sum_probs=181.8
Q ss_pred HhhhhccCCCCCC-Cc--eeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC
Q 009597 250 KKKEEKGNAGGEK-GE--HVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 326 (531)
Q Consensus 250 ~~~~~~~~~~~~~-~~--~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~ 326 (531)
++++++.++.... ++ .+++++...++......+|...+.+++|+|||+.|+.++.++.|++||+.+++....+....
T Consensus 43 ~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~ 122 (388)
T 3pe7_A 43 FTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPA 122 (388)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCT
T ss_pred CCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechh
Confidence 4555554332222 33 58888888888888888888777788999999999999999999999999998776554433
Q ss_pred cc-eEEEEccCCCCCcEEEE----------------------eeCCCeEEEEECCCCceeEEEcccCCCeeEEEEec-CC
Q 009597 327 IP-YVVKLNPDDDKQNILLA----------------------GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVD-SN 382 (531)
Q Consensus 327 ~~-~~~~~~~~~~~~~~l~s----------------------g~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp-~~ 382 (531)
.. ....+...++ +.+++. ...+..|.+||+.+++... +..+...+..+.|+| ++
T Consensus 123 ~~~~~~~~~~~~d-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg 200 (388)
T 3pe7_A 123 EWVGYGTWVANSD-CTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDD 200 (388)
T ss_dssp TEEEEEEEEECTT-SSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEE
T ss_pred hcccccceeECCC-CCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCC
Confidence 21 1122322222 344442 2345789999999887544 445667899999999 99
Q ss_pred CEEEEEeCC------CCEEEEEcCCCeEEEEeeCCCC-CCccEEEEeCCCCEEEEEEcC-C----eEEEEEcCCcceece
Q 009597 383 RRFVTSSDD------KSLRVWEFGIPVVIKYISEPHM-HSMPSISLHPNTNWLAAQSLD-N----QILIYSTRERFQLNK 450 (531)
Q Consensus 383 ~~l~s~s~D------g~I~iwd~~~~~~~~~~~~~~~-~~v~~v~~sp~~~~l~s~s~D-g----~I~iwd~~~~~~~~~ 450 (531)
++|+.++.+ ..|.++|...... ..+..... ..+..++|+|+|+.|+..+.. + .|.+||+.++... .
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-~ 278 (388)
T 3pe7_A 201 STVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR-Q 278 (388)
T ss_dssp EEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE-E
T ss_pred CEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE-E
Confidence 998887763 3788888766543 33332222 357788999999987665442 2 3999999886532 2
Q ss_pred eeeecCCccc-cceEEEEEcCCCCEEEEE---------eCCCcEEEEECCCCeEEEEeeccCC-----------cEEEEE
Q 009597 451 KKRFAGHIVA-GYACQVNFSPDGRFVMSG---------DGEGKCWFWDWKSCKVFRTLKCHEG-----------VCIGCE 509 (531)
Q Consensus 451 ~~~~~~~~~~-~~v~~l~~spdg~~l~sg---------s~dg~I~iwd~~~~~~~~~~~~h~~-----------~V~~v~ 509 (531)
+..+.++... .....+.|+|||+.|+.. ..+..|++||+.+++. ..+..|.. .+.+++
T Consensus 279 l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~ 357 (388)
T 3pe7_A 279 LTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPS 357 (388)
T ss_dssp EEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCE
T ss_pred EEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCcc
Confidence 2223331100 001113699999988754 4566899999998876 44555555 578899
Q ss_pred EecCCCCEEEEEeCCCCEEee
Q 009597 510 WHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 510 ~~p~~~~~l~t~s~Dg~I~iW 530 (531)
|+|++..+++++..+|...||
T Consensus 358 ~spDg~~l~~~s~~~g~~~l~ 378 (388)
T 3pe7_A 358 FTPDDKQILFTSDVHGKPALY 378 (388)
T ss_dssp ECTTSSEEEEEECTTSSCEEE
T ss_pred CCCCCCEEEEEecCCCceeEE
Confidence 999444444455567877776
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=1.2e-15 Score=153.22 Aligned_cols=228 Identities=9% Similarity=0.135 Sum_probs=156.5
Q ss_pred CceeeeeecccCe--eeEEecCccCceEEEEEccCCCEEEEEe-cCCeEEEEeCC-CCc--EEEEccCCC----------
Q 009597 263 GEHVEDKSTFHGK--CMRTYMGHSKAVRDISFCNDGTKFLTAS-YDKNIKYWDTE-TGQ--VIRTFSTGK---------- 326 (531)
Q Consensus 263 ~~~i~~~~~~~~~--~~~~l~gH~~~V~~l~fspdg~~l~s~s-~Dg~I~vWd~~-t~~--~i~~~~~~~---------- 326 (531)
++.+.+|+...++ .+..+..|...+..++|+|+|++|++++ .++.|.+|++. ++. .+..+....
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~ 141 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGS 141 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSC
T ss_pred CceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCC
Confidence 5678888876555 5566667888999999999999888887 67999999995 333 333332211
Q ss_pred cceEEEEccCCCCCcEEEEeeCCCeEEEEECC-CCceeE--EEcccC-CCeeEEEEecCCCEEEE-EeCCCCEEEEEcCC
Q 009597 327 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN-TKEITQ--EYDQHL-GAVNTITFVDSNRRFVT-SSDDKSLRVWEFGI 401 (531)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~-t~~~~~--~~~~h~-~~I~~l~~sp~~~~l~s-~s~Dg~I~iwd~~~ 401 (531)
.+..+.+.++ .. ++++...++.|.+|++. +++... .+..+. ..+..++|+|+|+++++ +..++.|.+|++..
T Consensus 142 ~~~~~~~spd--g~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 142 HIHYTDLTPD--NR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp CEEEEEECTT--SC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CceEEEECCC--Cc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 1334555553 33 77777889999999998 554332 223222 36788999999996665 55688999999874
Q ss_pred --CeE--EEEeeCCC-----CCCccEEEEeCCCCEEE-EEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCC
Q 009597 402 --PVV--IKYISEPH-----MHSMPSISLHPNTNWLA-AQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 471 (531)
Q Consensus 402 --~~~--~~~~~~~~-----~~~v~~v~~sp~~~~l~-s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd 471 (531)
+.. +..+.... ...+..++|+|+|++|+ +...++.|.+|++.....+.....+..+ ...+..++|+|+
T Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~--~~~~~~~~~spd 296 (347)
T 3hfq_A 219 QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTE--GDFPRDFDLDPT 296 (347)
T ss_dssp TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECS--SSCCCEEEECTT
T ss_pred CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecC--CCCcCeEEECCC
Confidence 432 22222111 13477899999999875 5556899999998743233333334333 234667999999
Q ss_pred CCEEEEEeC-CCcEEEE--ECCCCeEE
Q 009597 472 GRFVMSGDG-EGKCWFW--DWKSCKVF 495 (531)
Q Consensus 472 g~~l~sgs~-dg~I~iw--d~~~~~~~ 495 (531)
|++|++++. ++.|.+| |..++++.
T Consensus 297 g~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 297 EAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 999888875 4899999 55667654
No 161
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.74 E-value=7.9e-16 Score=154.02 Aligned_cols=240 Identities=10% Similarity=0.142 Sum_probs=178.1
Q ss_pred cCceEEEEEccCCCEEEEEecC------------------------CeEEEEeCCCCcEEEEccCCC--cceEEEEccCC
Q 009597 284 SKAVRDISFCNDGTKFLTASYD------------------------KNIKYWDTETGQVIRTFSTGK--IPYVVKLNPDD 337 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~D------------------------g~I~vWd~~t~~~i~~~~~~~--~~~~~~~~~~~ 337 (531)
-+.|.+|+++++|+++++.+.+ ++|.+||..+++.+..+.... .+..+.+.+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~-- 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT-- 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT--
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC--
Confidence 3579999999999988888777 479999999999887775444 345555554
Q ss_pred CCCcEEEEeeCCCeEEEEECCCCc-eeEEE---------cccCCCeeEEEEec-CCCEEEEEe-CCCCEEEEEcCCCeEE
Q 009597 338 DKQNILLAGMSDKKIVQWDMNTKE-ITQEY---------DQHLGAVNTITFVD-SNRRFVTSS-DDKSLRVWEFGIPVVI 405 (531)
Q Consensus 338 ~~~~~l~sg~~dg~I~iwd~~t~~-~~~~~---------~~h~~~I~~l~~sp-~~~~l~s~s-~Dg~I~iwd~~~~~~~ 405 (531)
.++++++...++.|++||..... .+..+ ..+......|+++| ++.++++.+ .++.|++||. .+..+
T Consensus 101 -~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~ 178 (329)
T 3fvz_A 101 -DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFV 178 (329)
T ss_dssp -TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEE
T ss_pred -CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEE
Confidence 34588888889999999986543 55665 34555789999999 788888886 6899999994 45555
Q ss_pred EEeeC---------CCCCCccEEEEeCC-CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcC-----
Q 009597 406 KYISE---------PHMHSMPSISLHPN-TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP----- 470 (531)
Q Consensus 406 ~~~~~---------~~~~~v~~v~~sp~-~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp----- 470 (531)
..+.. .+......++++|+ +.++++...++.|++|+..++..+.. +........+..++|+|
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~---~~~~~~~~~~~~~~~~pg~~~~ 255 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE---IKHASFGRNVFAISYIPGFLFA 255 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE---ECCTTTTTCEEEEEEETTEEEE
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE---EeccccCCCcceeeecCCEEEE
Confidence 55432 12234789999998 77777777889999999986654433 22222234567788999
Q ss_pred -CCCEEEEEeCCCcEEEEECCCCeEEEEee---ccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 471 -DGRFVMSGDGEGKCWFWDWKSCKVFRTLK---CHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 471 -dg~~l~sgs~dg~I~iwd~~~~~~~~~~~---~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+|+.+++...+..|++||..+++.+..+. .+...+.+++++| ++.++++...++.|++|+
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~-dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE-DGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT-TSEEEEEESSSCCEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC-CCCEEEEECCCCEEEEEe
Confidence 33333333345589999999999999884 5667789999999 668888888899999985
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.74 E-value=3.1e-17 Score=181.63 Aligned_cols=262 Identities=8% Similarity=-0.004 Sum_probs=179.4
Q ss_pred CCceeeeeecccCeeeEEecCccC---ceEEEEEccCCCEEEEEec---------CCeEEEEeCCCCcEEEEccCCCcce
Q 009597 262 KGEHVEDKSTFHGKCMRTYMGHSK---AVRDISFCNDGTKFLTASY---------DKNIKYWDTETGQVIRTFSTGKIPY 329 (531)
Q Consensus 262 ~~~~i~~~~~~~~~~~~~l~gH~~---~V~~l~fspdg~~l~s~s~---------Dg~I~vWd~~t~~~i~~~~~~~~~~ 329 (531)
.++.+++|+..++++...+.+|.. .|.+++|||||++|++++. ++.|++||+.+++.+..........
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~ 113 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQ 113 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBC
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccc
Confidence 367899999999998888887765 4999999999999998876 7899999999998732222233455
Q ss_pred EEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEE-cccCCCe-----------------eEEEEecCCCEEEEEeCC
Q 009597 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY-DQHLGAV-----------------NTITFVDSNRRFVTSSDD 391 (531)
Q Consensus 330 ~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~-~~h~~~I-----------------~~l~~sp~~~~l~s~s~D 391 (531)
.+.|+|++. .|+.+. ++.|++||+.+++..+.. .++...| .+++|+|+|++|++++.|
T Consensus 114 ~~~~SPDG~---~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 114 YLCWSPVGS---KLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp CEEECSSTT---CEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred cceECCCCC---EEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 677777653 455554 789999999888765433 2232222 589999999999998865
Q ss_pred C----------------------------------CEEEEEcCCCeEE--EEee-----CCCCCCccEEEEeCCCCEEEE
Q 009597 392 K----------------------------------SLRVWEFGIPVVI--KYIS-----EPHMHSMPSISLHPNTNWLAA 430 (531)
Q Consensus 392 g----------------------------------~I~iwd~~~~~~~--~~~~-----~~~~~~v~~v~~sp~~~~l~s 430 (531)
. .|++||+.++... ..+. ..+...+.+++|+|+++++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~ 269 (719)
T 1z68_A 190 DTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQ 269 (719)
T ss_dssp CTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEE
T ss_pred CCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEE
Confidence 2 7889999877532 1221 136667899999999877776
Q ss_pred EEcCC----eEEEEE----cCCcceeceee-eecCCccccceE-----EEEEcCCCCEEEE--EeCCC--cEEEEECCCC
Q 009597 431 QSLDN----QILIYS----TRERFQLNKKK-RFAGHIVAGYAC-----QVNFSPDGRFVMS--GDGEG--KCWFWDWKSC 492 (531)
Q Consensus 431 ~s~Dg----~I~iwd----~~~~~~~~~~~-~~~~~~~~~~v~-----~l~~spdg~~l~s--gs~dg--~I~iwd~~~~ 492 (531)
....+ .|.+|| +.++....... ...++ ..++. .+.|+|||+.|+. +..+| .|++||+.++
T Consensus 270 ~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~ 347 (719)
T 1z68_A 270 WLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESR--TGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE 347 (719)
T ss_dssp EEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECS--SSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST
T ss_pred EeccccCeEEEEEEcccCCCCCCceEEEEecccccC--CceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC
Confidence 54332 488899 76654432221 00223 22233 5789999996554 44555 5777888776
Q ss_pred eEEEEeeccCCcEEEEEEecCCCCEEEEEeC----CCCEEeeC
Q 009597 493 KVFRTLKCHEGVCIGCEWHPLEQSKVATCGW----DGLIKYWD 531 (531)
Q Consensus 493 ~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~----Dg~I~iWD 531 (531)
+ ...+..+...+..+.++ +++.+++++.. ++.+++|.
T Consensus 348 ~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~ 388 (719)
T 1z68_A 348 N-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYR 388 (719)
T ss_dssp T-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEE
T ss_pred c-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEE
Confidence 6 45565566667777777 45555555544 47788873
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.72 E-value=3.7e-17 Score=180.98 Aligned_cols=235 Identities=15% Similarity=0.153 Sum_probs=164.2
Q ss_pred EEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCc----ceEEEEccCCCCCcEEEEeeC---------CCeEEEE
Q 009597 289 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI----PYVVKLNPDDDKQNILLAGMS---------DKKIVQW 355 (531)
Q Consensus 289 ~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~----~~~~~~~~~~~~~~~l~sg~~---------dg~I~iw 355 (531)
+++|+|+|++ +..+.|+.|++||+.+++....+..+.. ...+.|++++ ..|++++. ++.|++|
T Consensus 20 ~~~~s~dg~~-~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg---~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQEY-LHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDR---QFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSSEE-EEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTS---SEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCeE-EEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCC---CeEEEEecCceeEEeecceEEEEE
Confidence 7899999964 4455699999999999998777654322 5667777744 46666655 7899999
Q ss_pred ECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCC-----------------CccE
Q 009597 356 DMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH-----------------SMPS 418 (531)
Q Consensus 356 d~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~-----------------~v~~ 418 (531)
|+.+++.+.... ....+..++|+|+|++|+.++ ++.|++||+.++........++.. ...+
T Consensus 96 d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 96 DLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp ETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred ECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 999887621111 125689999999999999886 789999999887665433232222 1258
Q ss_pred EEEeCCCCEEEEEEcCC----------------------------------eEEEEEcCCccee--cee---eeecCCcc
Q 009597 419 ISLHPNTNWLAAQSLDN----------------------------------QILIYSTRERFQL--NKK---KRFAGHIV 459 (531)
Q Consensus 419 v~~sp~~~~l~s~s~Dg----------------------------------~I~iwd~~~~~~~--~~~---~~~~~~~~ 459 (531)
++|+|+|++|++++.|. .|.+||+.++... ..+ ..+.++
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-- 251 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS-- 251 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS--
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC--
Confidence 99999999999988663 7889999876532 011 112234
Q ss_pred ccceEEEEEcCCCCEEEEEeCC----CcEEEEE----CCCCeEEEEe----eccCCcEE-----EEEEecCCCCEEE-EE
Q 009597 460 AGYACQVNFSPDGRFVMSGDGE----GKCWFWD----WKSCKVFRTL----KCHEGVCI-----GCEWHPLEQSKVA-TC 521 (531)
Q Consensus 460 ~~~v~~l~~spdg~~l~sgs~d----g~I~iwd----~~~~~~~~~~----~~h~~~V~-----~v~~~p~~~~~l~-t~ 521 (531)
...+..++||||++++++.... ..|++|| ..++++...+ ..|.+.+. .+.|+|++..+++ ++
T Consensus 252 ~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 331 (719)
T 1z68_A 252 DYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFS 331 (719)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEE
T ss_pred cceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEE
Confidence 3557889999998877775432 2488999 8888766555 46776666 7899994444433 45
Q ss_pred eCCCC--EEeeC
Q 009597 522 GWDGL--IKYWD 531 (531)
Q Consensus 522 s~Dg~--I~iWD 531 (531)
..+|. |.+||
T Consensus 332 ~~~g~~~l~~~~ 343 (719)
T 1z68_A 332 DKDGYKHIHYIK 343 (719)
T ss_dssp CTTSCEEEEEES
T ss_pred ccCCceEEEEEE
Confidence 56665 44443
No 164
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.72 E-value=5.7e-15 Score=149.18 Aligned_cols=241 Identities=12% Similarity=0.134 Sum_probs=159.0
Q ss_pred Cceeeeeeccc--Ce--eeEEecCccCceEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcEEEEc----c-CC-------
Q 009597 263 GEHVEDKSTFH--GK--CMRTYMGHSKAVRDISFCNDGTKFLTAS-YDKNIKYWDTETGQVIRTF----S-TG------- 325 (531)
Q Consensus 263 ~~~i~~~~~~~--~~--~~~~l~gH~~~V~~l~fspdg~~l~s~s-~Dg~I~vWd~~t~~~i~~~----~-~~------- 325 (531)
.+.+.+|.... ++ .+..+..+......+++ ++++|++++ .++.|.+|++.....+..+ . .+
T Consensus 74 ~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 151 (361)
T 3scy_A 74 QAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKER 151 (361)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTT
T ss_pred CCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccc
Confidence 36777776543 43 44555556677888888 788777776 5789999999754332211 1 11
Q ss_pred ---CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc-------ee------EEEcccCCCeeEEEEecCCCEEEEEe
Q 009597 326 ---KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE-------IT------QEYDQHLGAVNTITFVDSNRRFVTSS 389 (531)
Q Consensus 326 ---~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~-------~~------~~~~~h~~~I~~l~~sp~~~~l~s~s 389 (531)
..+..+.++++. ..+++++..++.|.+|++.... .. .....+...+.+++|+|+++++++++
T Consensus 152 ~~~~~~~~~~~spdg--~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 229 (361)
T 3scy_A 152 QTMPHLHCVRITPDG--KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN 229 (361)
T ss_dssp CSSCCEEEEEECTTS--SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred cCCCcceEEEECCCC--CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc
Confidence 112445666543 3466666678999999987543 21 11233445678999999999887777
Q ss_pred -CCCCEEEEEcCCCeE--EEEeeC--CCCCCccEEEEeCCCCEEEEEEcC--CeEEEEEcC--CcceeceeeeecCCccc
Q 009597 390 -DDKSLRVWEFGIPVV--IKYISE--PHMHSMPSISLHPNTNWLAAQSLD--NQILIYSTR--ERFQLNKKKRFAGHIVA 460 (531)
Q Consensus 390 -~Dg~I~iwd~~~~~~--~~~~~~--~~~~~v~~v~~sp~~~~l~s~s~D--g~I~iwd~~--~~~~~~~~~~~~~~~~~ 460 (531)
.++.|.+|++.++.. +..+.. .+......++|+|+|++|+++..+ +.|.+|++. ++. +.....+.. .
T Consensus 230 ~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~-~~~~~~~~~---g 305 (361)
T 3scy_A 230 EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT-LTKVGYQLT---G 305 (361)
T ss_dssp TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC-EEEEEEEEC---S
T ss_pred CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc-EEEeeEecC---C
Confidence 689999999987644 222221 223446799999999999777765 899999986 222 222222222 2
Q ss_pred cceEEEEEcCCCCEEEEEe-CCCcEEEE--ECCCCeEEEEee-ccCCcEEEEEEe
Q 009597 461 GYACQVNFSPDGRFVMSGD-GEGKCWFW--DWKSCKVFRTLK-CHEGVCIGCEWH 511 (531)
Q Consensus 461 ~~v~~l~~spdg~~l~sgs-~dg~I~iw--d~~~~~~~~~~~-~h~~~V~~v~~~ 511 (531)
..+..++|+|+|++|++++ .++.|.+| |..++++..... .+...+.|+.|.
T Consensus 306 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 306 IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 3466799999999988887 67889995 555777655442 344568888886
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.70 E-value=3.8e-15 Score=151.22 Aligned_cols=256 Identities=13% Similarity=0.105 Sum_probs=183.0
Q ss_pred CceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEe----------cCCeEEEEeCCCCcEEEEccCC-------
Q 009597 263 GEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTAS----------YDKNIKYWDTETGQVIRTFSTG------- 325 (531)
Q Consensus 263 ~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s----------~Dg~I~vWd~~t~~~i~~~~~~------- 325 (531)
++.+.+++..+++.+.++..+..+ .++|+|||++|+++. .++.|.+||+.+++.+.++...
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred cCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 457889998899999999888776 999999999999886 3678999999999998887643
Q ss_pred CcceEEEEccCCCCCcEEEEee-C-CCeEEEEECCCCceeEE-EcccCCCeeEEEEecCC-CEEEEEeCCCCEEEEEcCC
Q 009597 326 KIPYVVKLNPDDDKQNILLAGM-S-DKKIVQWDMNTKEITQE-YDQHLGAVNTITFVDSN-RRFVTSSDDKSLRVWEFGI 401 (531)
Q Consensus 326 ~~~~~~~~~~~~~~~~~l~sg~-~-dg~I~iwd~~t~~~~~~-~~~h~~~I~~l~~sp~~-~~l~s~s~Dg~I~iwd~~~ 401 (531)
..+..+.++++. ++|+++. . ++.|.+||+.+++.+.. +.. .....+.+.|++ ..+++.+.||.+.+|++..
T Consensus 108 ~~p~~i~~spdg---~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 108 NYDGLFRQTTDG---KFIVLQNASPATSIGIVDVAKGDYVEDVTAA--AGCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp CCGGGEEECTTS---SEEEEEEESSSEEEEEEETTTTEEEEEEGGG--TTEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CCcceEEECCCC---CEEEEECCCCCCeEEEEECCCCcEEEEEecC--CCcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 345567777654 4565554 3 68999999999988877 543 222335677765 6788999999999999865
Q ss_pred -CeEEEEee-----CCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeec--C------CccccceEEEE
Q 009597 402 -PVVIKYIS-----EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA--G------HIVAGYACQVN 467 (531)
Q Consensus 402 -~~~~~~~~-----~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~--~------~~~~~~v~~l~ 467 (531)
+....... .....+ ..+.+++++..++..+.++.|.++|+...... ....+. . .........++
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~p~g~~~~a 260 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVK-VDGPWSLLNDEDKAKNWVPGGYNLVG 260 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCE-EEEEEESCCHHHHHTTCEECCSSCEE
T ss_pred CCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCce-ecccccccCccccccccccCCeeEEE
Confidence 44332211 111222 23334677777888888999999998654211 111110 0 00001111278
Q ss_pred EcCCCCEEEEEeC-----------CCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 468 FSPDGRFVMSGDG-----------EGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 468 ~spdg~~l~sgs~-----------dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|+|++..++++.. .+.|.+||+.+++.+.++..+. +.+++|+| ++++|++++. +.|.+||
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~sp-dg~~l~v~n~-~~v~v~D 331 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQ-QRNLMLTLDG-GNVNVYD 331 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEET-TTTEEEEECS-SCEEEEE
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECC-CCCEEEEeCC-CeEEEEE
Confidence 9999888877643 3479999999999999999877 89999999 6678888876 9999997
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.69 E-value=4.5e-15 Score=151.04 Aligned_cols=254 Identities=13% Similarity=0.067 Sum_probs=172.2
Q ss_pred eecccCeeeEEecCccCceEE-----EEEccCCCEEEEEec-CC--eEEEEeCCCCcEEEEccCCCcce-EEEEccCCCC
Q 009597 269 KSTFHGKCMRTYMGHSKAVRD-----ISFCNDGTKFLTASY-DK--NIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDK 339 (531)
Q Consensus 269 ~~~~~~~~~~~l~gH~~~V~~-----l~fspdg~~l~s~s~-Dg--~I~vWd~~t~~~i~~~~~~~~~~-~~~~~~~~~~ 339 (531)
.+..++..++.+..|...+.. .+|+|||++|+.++. ++ .|.+||+.+++............ ...|++++
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg-- 92 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD-- 92 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS--
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC--
Confidence 456678888999988877776 899999999998887 66 48889999988776654333222 34566643
Q ss_pred CcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEE--EecCCCEEEEEe----------------------CCCCEE
Q 009597 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTIT--FVDSNRRFVTSS----------------------DDKSLR 395 (531)
Q Consensus 340 ~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~--~sp~~~~l~s~s----------------------~Dg~I~ 395 (531)
..|+.++.++.|++||+.+++....+..+...+.... +++++++++... .+..|.
T Consensus 93 -~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (388)
T 3pe7_A 93 -DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLM 171 (388)
T ss_dssp -SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEE
T ss_pred -CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEE
Confidence 5688888889999999999988777776766565444 478999887432 346799
Q ss_pred EEEcCCCeEEEEeeCCCCCCccEEEEeC-CCCEEEEEEcC------CeEEEEEcCCcceeceeeeecCCccccceEEEEE
Q 009597 396 VWEFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLD------NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNF 468 (531)
Q Consensus 396 iwd~~~~~~~~~~~~~~~~~v~~v~~sp-~~~~l~s~s~D------g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~ 468 (531)
+||+.++....... +...+..++|+| +|+.|+....+ ..|.++|+..... ..+..+.....+..+.|
T Consensus 172 ~~d~~~g~~~~l~~--~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~----~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 172 RVDLKTGESTVILQ--ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM----RKVKTHAEGESCTHEFW 245 (388)
T ss_dssp EEETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC----EESCCCCTTEEEEEEEE
T ss_pred EEECCCCceEEeec--CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce----EEeeeCCCCcccccceE
Confidence 99999886554432 456788999999 99999887764 3788888765422 12222221124667899
Q ss_pred cCCCCEEEEEeC-CC----cEEEEECCCCeE--EEEeeccCCc---EEEEEEecCCCCEEEEE--------eCCCCEEee
Q 009597 469 SPDGRFVMSGDG-EG----KCWFWDWKSCKV--FRTLKCHEGV---CIGCEWHPLEQSKVATC--------GWDGLIKYW 530 (531)
Q Consensus 469 spdg~~l~sgs~-dg----~I~iwd~~~~~~--~~~~~~h~~~---V~~v~~~p~~~~~l~t~--------s~Dg~I~iW 530 (531)
+|||+.|+..+. ++ .|++||+.+++. +..+..+... ...+.|+|++..++++. ..+..|++|
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence 999997765442 22 399999998874 3333331111 11236899444333332 446678888
Q ss_pred C
Q 009597 531 D 531 (531)
Q Consensus 531 D 531 (531)
|
T Consensus 326 d 326 (388)
T 3pe7_A 326 N 326 (388)
T ss_dssp E
T ss_pred e
Confidence 6
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.66 E-value=1.6e-15 Score=168.78 Aligned_cols=236 Identities=12% Similarity=0.163 Sum_probs=160.9
Q ss_pred ceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcc----eE--EEEccCCCCCcEEEEeeCC---------C
Q 009597 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP----YV--VKLNPDDDKQNILLAGMSD---------K 350 (531)
Q Consensus 286 ~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~----~~--~~~~~~~~~~~~l~sg~~d---------g 350 (531)
...++.|+|||.+|+++ |+.|++||+.++++...+..+... .. ..++++ +..|+.++.+ +
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd---g~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPD---GQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTT---SSEEEEEEEEEECSSSCEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCC---CCEEEEEECCeeeEEEccce
Confidence 45689999999888886 899999999999987776544321 11 455554 3567776665 6
Q ss_pred eEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCC----------------
Q 009597 351 KIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH---------------- 414 (531)
Q Consensus 351 ~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~---------------- 414 (531)
.+.+||+.+++... +..|.+.+...+|+|+|+.|+.++ ++.|++|++.++...+....++..
T Consensus 93 ~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 93 SYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 67899999988653 566778899999999999999885 678999999887654433222222
Q ss_pred -CccEEEEeCCCCEEEEEEcCC------------------------------------eEEEEEcCC---cceeceeeee
Q 009597 415 -SMPSISLHPNTNWLAAQSLDN------------------------------------QILIYSTRE---RFQLNKKKRF 454 (531)
Q Consensus 415 -~v~~v~~sp~~~~l~s~s~Dg------------------------------------~I~iwd~~~---~~~~~~~~~~ 454 (531)
....+.|+|+|+.|+..+.|. +|.+||+.+ +..+......
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 224589999999999886432 477788876 5211111111
Q ss_pred c-----CCccccceEEEEEcCCCCEEEEEeC----CCcEEEEECCCCe----EE--EEe--eccCCcEE-----EEEEec
Q 009597 455 A-----GHIVAGYACQVNFSPDGRFVMSGDG----EGKCWFWDWKSCK----VF--RTL--KCHEGVCI-----GCEWHP 512 (531)
Q Consensus 455 ~-----~~~~~~~v~~l~~spdg~~l~sgs~----dg~I~iwd~~~~~----~~--~~~--~~h~~~V~-----~v~~~p 512 (531)
. ++ ..++..++|+|||+.++.... +..|++||+.+++ +. ..+ ..|...|. .+.|+|
T Consensus 251 ~~~~~~~~--~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp 328 (740)
T 4a5s_A 251 APASMLIG--DHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL 328 (740)
T ss_dssp CCHHHHTS--CEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT
T ss_pred CCccCCCC--CeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC
Confidence 1 13 456888999999997765532 3479999998876 22 122 34555443 788999
Q ss_pred CCCCEEE-EEe-CCCC--EEeeC
Q 009597 513 LEQSKVA-TCG-WDGL--IKYWD 531 (531)
Q Consensus 513 ~~~~~l~-t~s-~Dg~--I~iWD 531 (531)
++..|+ ..+ .+|. |++||
T Consensus 329 -DG~~l~~~~s~~~G~~~l~~~~ 350 (740)
T 4a5s_A 329 -DGNSFYKIISNEEGYRHICYFQ 350 (740)
T ss_dssp -TSSEEEEEEECTTSCEEEEEEE
T ss_pred -CCCEEEEEEEcCCCceEEEEEE
Confidence 555554 554 4554 55543
No 168
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=1.5e-13 Score=136.92 Aligned_cols=251 Identities=14% Similarity=0.177 Sum_probs=172.1
Q ss_pred CCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEc-cCCCcceEEEEccCCCC
Q 009597 261 EKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDK 339 (531)
Q Consensus 261 ~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~-~~~~~~~~~~~~~~~~~ 339 (531)
..+..+..| .++....+.+|...+.+++|+++|++++++..++.|.+||..+++....+ .....+..+.+.++
T Consensus 24 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~d--- 97 (333)
T 2dg1_A 24 ISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKD--- 97 (333)
T ss_dssp CCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTT---
T ss_pred eecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCC---
Confidence 334455555 46777888888888999999999997788888999999999988876544 23344455555543
Q ss_pred CcEEEEeeCC----CeEEEEECCCCceeEEEc--ccCCCeeEEEEecCCCEEEEEeC------CCCEEEEEcCCCeEEEE
Q 009597 340 QNILLAGMSD----KKIVQWDMNTKEITQEYD--QHLGAVNTITFVDSNRRFVTSSD------DKSLRVWEFGIPVVIKY 407 (531)
Q Consensus 340 ~~~l~sg~~d----g~I~iwd~~t~~~~~~~~--~h~~~I~~l~~sp~~~~l~s~s~------Dg~I~iwd~~~~~~~~~ 407 (531)
+.+++++..+ +.|.+||..++.....+. .+...+.+++++|+++++++... .+.|..||...+.....
T Consensus 98 g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 98 GRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp SCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 3566666665 689999998877654443 24457899999999988877654 24566666655443332
Q ss_pred eeCCCCCCccEEEEeCCCCEEEEE-EcCCeEEEEEcCC-cceecee-----eeecCCccccceEEEEEcCCCCEEEEEeC
Q 009597 408 ISEPHMHSMPSISLHPNTNWLAAQ-SLDNQILIYSTRE-RFQLNKK-----KRFAGHIVAGYACQVNFSPDGRFVMSGDG 480 (531)
Q Consensus 408 ~~~~~~~~v~~v~~sp~~~~l~s~-s~Dg~I~iwd~~~-~~~~~~~-----~~~~~~~~~~~v~~l~~spdg~~l~sgs~ 480 (531)
.. ....+..++|+|+++.|+++ +.++.|.+|++.. +..+... ..+.++ ..+..++++++|+++++...
T Consensus 178 ~~--~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~---~~~~~i~~d~~G~l~v~~~~ 252 (333)
T 2dg1_A 178 IQ--NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH---EGPDSCCIDSDDNLYVAMYG 252 (333)
T ss_dssp EE--EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS---SEEEEEEEBTTCCEEEEEET
T ss_pred ec--CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC---CCCCceEECCCCCEEEEEcC
Confidence 21 23457789999999866554 4578999999863 2222111 111221 24667999999998888878
Q ss_pred CCcEEEEECCCCeEEEEeeccCC------cEEEEEEecCCCCEEEEEeCC
Q 009597 481 EGKCWFWDWKSCKVFRTLKCHEG------VCIGCEWHPLEQSKVATCGWD 524 (531)
Q Consensus 481 dg~I~iwd~~~~~~~~~~~~h~~------~V~~v~~~p~~~~~l~t~s~D 524 (531)
++.|.+||. .++.+..+..+.. .+.+++|+| ++..|+.++.+
T Consensus 253 ~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~-dg~~L~v~~~~ 300 (333)
T 2dg1_A 253 QGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIP-GTNQLIICSND 300 (333)
T ss_dssp TTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECT-TSCEEEEEEEC
T ss_pred CCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECC-CCCEEEEEeCc
Confidence 899999998 5677777765433 578999998 54455444444
No 169
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.65 E-value=1.1e-13 Score=138.41 Aligned_cols=258 Identities=10% Similarity=0.056 Sum_probs=186.9
Q ss_pred CCCceeeeeecccCeeeEEec------CccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEc
Q 009597 261 EKGEHVEDKSTFHGKCMRTYM------GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 334 (531)
Q Consensus 261 ~~~~~i~~~~~~~~~~~~~l~------gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~ 334 (531)
..++.+..++..+++....+. .......++.+. +++.+++...++.|.+||..+++.+.++.....+..+.+.
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~ 92 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFL 92 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEE
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEe
Confidence 447788999988888776552 122456788884 4556666666899999999999999998766677777775
Q ss_pred cCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccC-----CCeeEEEEecCCCEEEEEe-CCCCEEEEEcCCCeEEEEe
Q 009597 335 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHL-----GAVNTITFVDSNRRFVTSS-DDKSLRVWEFGIPVVIKYI 408 (531)
Q Consensus 335 ~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~-----~~I~~l~~sp~~~~l~s~s-~Dg~I~iwd~~~~~~~~~~ 408 (531)
+. +.++++...++.|.+||+.+++....+.... .....|++ .+++.+++.. .++.|.+||+.+++.+..+
T Consensus 93 ~~---g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 93 SD---EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp ET---TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred CC---CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 54 2455555489999999999999887776443 14567777 4444444443 4889999999999888777
Q ss_pred eCCCCCCccEEEEeCCCCEEEEEEcC----------CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEE
Q 009597 409 SEPHMHSMPSISLHPNTNWLAAQSLD----------NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG 478 (531)
Q Consensus 409 ~~~~~~~v~~v~~sp~~~~l~s~s~D----------g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sg 478 (531)
.. ......++++|+|++++++..+ +.|.++|..+......+....+ .....++|+|++++|+++
T Consensus 169 ~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g----~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 169 TI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG----DWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp EC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT----CCCEEEEECTTSCEEEEE
T ss_pred Ec--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC----CCceeEEEecCCCEEEEE
Confidence 54 3346788999999977776654 7899999987654432221111 246779999999999887
Q ss_pred eCCCcEEEEECCCCeEEEE--eeccCCcEEEEEEecCCCCEEEEE----eCCCCEEeeC
Q 009597 479 DGEGKCWFWDWKSCKVFRT--LKCHEGVCIGCEWHPLEQSKVATC----GWDGLIKYWD 531 (531)
Q Consensus 479 s~dg~I~iwd~~~~~~~~~--~~~h~~~V~~v~~~p~~~~~l~t~----s~Dg~I~iWD 531 (531)
.. .|.+||..+++.... +..+.....+++++|.++.++++. ..++.|.+||
T Consensus 243 ~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 243 NN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp SS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred cc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEEC
Confidence 66 899999998876421 122235678999999777777777 6788999987
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.64 E-value=6.2e-14 Score=137.60 Aligned_cols=240 Identities=8% Similarity=0.017 Sum_probs=167.1
Q ss_pred eeeEEecCccCceEEEEEccCCC-EEEEEecCCeEEEEeCCCCcEEEEccC-CCcceEEEEccCCCCCcEEEEeeCCCeE
Q 009597 275 KCMRTYMGHSKAVRDISFCNDGT-KFLTASYDKNIKYWDTETGQVIRTFST-GKIPYVVKLNPDDDKQNILLAGMSDKKI 352 (531)
Q Consensus 275 ~~~~~l~gH~~~V~~l~fspdg~-~l~s~s~Dg~I~vWd~~t~~~i~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~dg~I 352 (531)
..+..+..+.....+++|+|+|+ +++++..++.|.+|+..++ ...+.. ...+..+.+.++ +.++++...++.|
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~d---g~l~v~~~~~~~i 92 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQ---GHLIACSHGLRRL 92 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTT---CCEEEEETTTTEE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCC---CcEEEEecCCCeE
Confidence 34455666777889999999998 7888888999999999887 444433 333445555553 3567666667899
Q ss_pred EEEECCCCceeEEEccc----CCCeeEEEEecCCCEEEEEeC-----------------CCCEEEEEcCCCeEEEEeeCC
Q 009597 353 VQWDMNTKEITQEYDQH----LGAVNTITFVDSNRRFVTSSD-----------------DKSLRVWEFGIPVVIKYISEP 411 (531)
Q Consensus 353 ~iwd~~t~~~~~~~~~h----~~~I~~l~~sp~~~~l~s~s~-----------------Dg~I~iwd~~~~~~~~~~~~~ 411 (531)
.+||..+++........ ...++.++++|+|+++++.+. .+.|..++.. +.. ..+. .
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~-~ 169 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPI-R 169 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEE-C
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEee-c
Confidence 99999888765443322 235678999999998887321 2345555554 333 2332 2
Q ss_pred CCCCccEEEEeCCCCEEEEEEcCCeEEEEEcC-CcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 009597 412 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTR-ERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 490 (531)
Q Consensus 412 ~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~-~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~ 490 (531)
+......++|+|+++.|++.+.++.|.+|++. ++........+.. ....+..++++++|+++++. ++.|.+||..
T Consensus 170 ~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~--~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTV--EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECC--SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeC--CCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 45567889999999999777778999999986 3322011222211 23345569999999977666 7899999976
Q ss_pred CCeEEEEeeccCCcEEEEEEe-cCCCCEEEEEeCCCCEEe
Q 009597 491 SCKVFRTLKCHEGVCIGCEWH-PLEQSKVATCGWDGLIKY 529 (531)
Q Consensus 491 ~~~~~~~~~~h~~~V~~v~~~-p~~~~~l~t~s~Dg~I~i 529 (531)
++.+..+..+.. +.+++|. | ++..|+.++.++.+++
T Consensus 246 -g~~~~~~~~~~~-~~~~~f~~~-d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 246 -GDELGRVLTPQT-TSNLCFGGP-EGRTLYMTVSTEFWSI 282 (296)
T ss_dssp -SCEEEEEECSSC-CCEEEEEST-TSCEEEEEETTEEEEE
T ss_pred -CCEEEEEECCCC-ceeEEEECC-CCCEEEEEcCCeEEEE
Confidence 788888887777 8899995 6 6677887787775554
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=8.3e-15 Score=149.12 Aligned_cols=254 Identities=11% Similarity=0.006 Sum_probs=166.8
Q ss_pred ceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcc-eE---EEE------
Q 009597 264 EHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP-YV---VKL------ 333 (531)
Q Consensus 264 ~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~-~~---~~~------ 333 (531)
..+++++...++......++...+..+.|+|||++|+.++.++.|++||+.+++....+...... .. +.+
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 139 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKL 139 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEE
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCcc
Confidence 46788887777765554444433445889999999999999999999999998866555422221 00 111
Q ss_pred --------ccCCCCCcEEEEe-----eCCCeEEEEECCCCceeEEEcccCCCeeEEEEec-CCCEEEEEeCC------CC
Q 009597 334 --------NPDDDKQNILLAG-----MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVD-SNRRFVTSSDD------KS 393 (531)
Q Consensus 334 --------~~~~~~~~~l~sg-----~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp-~~~~l~s~s~D------g~ 393 (531)
.+.++ +..++.+ ..+..|.+||+.+++..... .+...+..+.|+| +++.|+.++.+ ..
T Consensus 140 ~~~~~~~~~~spd-g~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~ 217 (396)
T 3c5m_A 140 VGIEILKRDWQPL-TSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDAR 217 (396)
T ss_dssp EEEEEEGGGCCCC-CSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCC
T ss_pred ccccccccccCCC-CcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCce
Confidence 11222 2222222 45678999999988765554 4667899999999 78877776653 35
Q ss_pred EEEEEcCCCeEEEEeeCCC-CCCccEEEEeCCCCEEEEEEcC-----CeEEEEEcCCcceeceeeeecCCccccceEEEE
Q 009597 394 LRVWEFGIPVVIKYISEPH-MHSMPSISLHPNTNWLAAQSLD-----NQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 467 (531)
Q Consensus 394 I~iwd~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~l~s~s~D-----g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~ 467 (531)
|.+||+..+... .+.... ...+..++|+|+|++|+.++.+ +.|.+||+.++... .+..+.+ .. +.
T Consensus 218 l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~------~~-~~ 288 (396)
T 3c5m_A 218 MWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE-EVMVMPP------CS-HL 288 (396)
T ss_dssp CEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE-EEEECCS------EE-EE
T ss_pred EEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE-EeeeCCC------CC-CC
Confidence 888898765432 232211 2357788999999988877654 45999999876432 1222221 22 78
Q ss_pred EcC-CCCEEEEEe----------------CCCcEEEEECCCCeEEEEeeccCC-----------cEEEEEEecCCCCEEE
Q 009597 468 FSP-DGRFVMSGD----------------GEGKCWFWDWKSCKVFRTLKCHEG-----------VCIGCEWHPLEQSKVA 519 (531)
Q Consensus 468 ~sp-dg~~l~sgs----------------~dg~I~iwd~~~~~~~~~~~~h~~-----------~V~~v~~~p~~~~~l~ 519 (531)
|+| +|++|++++ .++.|++||+.+++.. .+..|.. .+..++|+| ++..|+
T Consensus 289 ~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~ 366 (396)
T 3c5m_A 289 MSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTP-NDDGVL 366 (396)
T ss_dssp EECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECT-TSSEEE
T ss_pred ccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEcc-CCCeEE
Confidence 999 999888754 3478999999887753 3444443 256688999 555555
Q ss_pred EEe-CCCCEEee
Q 009597 520 TCG-WDGLIKYW 530 (531)
Q Consensus 520 t~s-~Dg~I~iW 530 (531)
.++ .++...||
T Consensus 367 ~~s~~~~~~~l~ 378 (396)
T 3c5m_A 367 FTSDFEGVPAIY 378 (396)
T ss_dssp EEECTTSSCEEE
T ss_pred EEecCCCCceEE
Confidence 554 46666555
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.63 E-value=1.4e-14 Score=158.56 Aligned_cols=247 Identities=9% Similarity=0.029 Sum_probs=169.7
Q ss_pred EEecCccCceEEEEEccCCCEEEEE--ecCCeEEEEeCCCCcEEEEccCCCcc-e---------EEEEccCCCCCc-EEE
Q 009597 278 RTYMGHSKAVRDISFCNDGTKFLTA--SYDKNIKYWDTETGQVIRTFSTGKIP-Y---------VVKLNPDDDKQN-ILL 344 (531)
Q Consensus 278 ~~l~gH~~~V~~l~fspdg~~l~s~--s~Dg~I~vWd~~t~~~i~~~~~~~~~-~---------~~~~~~~~~~~~-~l~ 344 (531)
..+.+|...|..++|++++-++++. +.++...||....+.....+..+... . ...+..+++... +++
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 3466789999999999887667776 55889999985444445555443322 2 233432233445 454
Q ss_pred EeeCCCeEEEEECC--C-CceeEEEcc-----cCCCeeEEEEecCCCEEEEEeCC----------CCEEEEEcCC-----
Q 009597 345 AGMSDKKIVQWDMN--T-KEITQEYDQ-----HLGAVNTITFVDSNRRFVTSSDD----------KSLRVWEFGI----- 401 (531)
Q Consensus 345 sg~~dg~I~iwd~~--t-~~~~~~~~~-----h~~~I~~l~~sp~~~~l~s~s~D----------g~I~iwd~~~----- 401 (531)
+...+..|.++++. . ++ ...+.. |...+.+++|+|+|++|++++.+ ..|++||+.+
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred EECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 54456778888876 3 43 445554 66788999999999999998877 5899999987
Q ss_pred -CeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCC--------eEEEEEcC-CcceeceeeeecCCccccceEEEEEcCC
Q 009597 402 -PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN--------QILIYSTR-ERFQLNKKKRFAGHIVAGYACQVNFSPD 471 (531)
Q Consensus 402 -~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg--------~I~iwd~~-~~~~~~~~~~~~~~~~~~~v~~l~~spd 471 (531)
+.. ..+...+...+..++|+|+|++|+.++.++ .|.+||+. ++..........++ ...+..+.|+||
T Consensus 176 ~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~--~~~~~~~~~spd 252 (662)
T 3azo_A 176 RSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP--EEAIAQAEWAPD 252 (662)
T ss_dssp GGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET--TBCEEEEEECTT
T ss_pred CCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC--CceEcceEECCC
Confidence 443 333312456788899999999999888653 79999998 44111111112222 244778999999
Q ss_pred CCEEEEEeCCC--cEEEEECCCCeEEEEeeccCCc--------EEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 472 GRFVMSGDGEG--KCWFWDWKSCKVFRTLKCHEGV--------CIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 472 g~~l~sgs~dg--~I~iwd~~~~~~~~~~~~h~~~--------V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
|+++++++.++ .|++||..+++.......+... +..++|+| ++.++++++. +.++||
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGK-GAAVLG 319 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBS-SSCEEE
T ss_pred CeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeC-CCEEEEEEEc-CccEEE
Confidence 99888888888 6777787677765444433322 46788888 7788999988 999988
No 173
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.62 E-value=1.2e-13 Score=138.01 Aligned_cols=237 Identities=11% Similarity=0.041 Sum_probs=176.0
Q ss_pred CCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC------cceEEEEc
Q 009597 261 EKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK------IPYVVKLN 334 (531)
Q Consensus 261 ~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~------~~~~~~~~ 334 (531)
..++.+.+++..+++.+.++. .......|+++++++.+++...++.|.+||+.+++.+..+..+. .+..+.+
T Consensus 61 ~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~- 138 (328)
T 3dsm_A 61 NNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ- 138 (328)
T ss_dssp GGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-
T ss_pred cCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-
Confidence 345678999999999999885 45678999999998655555489999999999999988887666 5555555
Q ss_pred cCCCCCcEEEEee-CCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCC----------CCEEEEEcCCCe
Q 009597 335 PDDDKQNILLAGM-SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD----------KSLRVWEFGIPV 403 (531)
Q Consensus 335 ~~~~~~~~l~sg~-~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~D----------g~I~iwd~~~~~ 403 (531)
. .+.++++.. .++.|.++|+.+++.+..+... .....+.++|+|++++++..+ +.|.++|..+.+
T Consensus 139 -~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~ 214 (328)
T 3dsm_A 139 -Y--GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT 214 (328)
T ss_dssp -E--TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE
T ss_pred -E--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe
Confidence 1 334555554 4899999999999988887653 345789999999877777655 789999999998
Q ss_pred EEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcC-CCCEEEEE----
Q 009597 404 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP-DGRFVMSG---- 478 (531)
Q Consensus 404 ~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~sg---- 478 (531)
....+..+.......++++|+++.|+++.. .|.+||..++.... ....... ......++++| ++.++++.
T Consensus 215 v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~-~~~~~~~--~~~p~gi~vdp~~g~lyva~~~~y 289 (328)
T 3dsm_A 215 VEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPV-RPFLEFR--DTKYYGLTVNPNNGEVYVADAIDY 289 (328)
T ss_dssp EEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCS-SCSBCCC--SSCEEEEEECTTTCCEEEEECTTS
T ss_pred EEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceee-eeeecCC--CCceEEEEEcCCCCeEEEEccccc
Confidence 877765433457889999999998888654 89999998765321 1111111 24577799999 56666665
Q ss_pred eCCCcEEEEECCCCeEEEEeeccCCcEEEEEE
Q 009597 479 DGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 510 (531)
Q Consensus 479 s~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~ 510 (531)
..++.|.+||.. ++.+.++..-..+ ..++|
T Consensus 290 ~~~~~V~v~d~~-g~~~~~i~~G~~P-~~~~~ 319 (328)
T 3dsm_A 290 QQQGIVYRYSPQ-GKLIDEFYVGIIP-GAFCW 319 (328)
T ss_dssp SSEEEEEEECTT-CCEEEEEEEEESE-EEEEE
T ss_pred ccCCEEEEECCC-CCEEEEEEeccCc-ceEEE
Confidence 578899999988 9988888743332 45554
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.61 E-value=8e-14 Score=152.61 Aligned_cols=258 Identities=7% Similarity=-0.040 Sum_probs=168.0
Q ss_pred CCceeeeeecccCeeeEEecCccCceE---------EEEEc--cCCCE-EEEEec-CCeEEEEeCC--C-CcEEEEccCC
Q 009597 262 KGEHVEDKSTFHGKCMRTYMGHSKAVR---------DISFC--NDGTK-FLTASY-DKNIKYWDTE--T-GQVIRTFSTG 325 (531)
Q Consensus 262 ~~~~i~~~~~~~~~~~~~l~gH~~~V~---------~l~fs--pdg~~-l~s~s~-Dg~I~vWd~~--t-~~~i~~~~~~ 325 (531)
.++...+|....+...+.+..|...|. ...|+ |||++ |+.++. +..|.+|++. . +. ...+...
T Consensus 45 ~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~ 123 (662)
T 3azo_A 45 EAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPV 123 (662)
T ss_dssp TTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCC
T ss_pred cCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCC
Confidence 344555565444556777888887777 67676 99998 776553 5667777765 3 44 3444331
Q ss_pred ----C--cceEEEEccCCCCCcEEEEeeCC----------CeEEEEECCC------CceeEEEc-ccCCCeeEEEEecCC
Q 009597 326 ----K--IPYVVKLNPDDDKQNILLAGMSD----------KKIVQWDMNT------KEITQEYD-QHLGAVNTITFVDSN 382 (531)
Q Consensus 326 ----~--~~~~~~~~~~~~~~~~l~sg~~d----------g~I~iwd~~t------~~~~~~~~-~h~~~I~~l~~sp~~ 382 (531)
+ ....+.|++++ ..|++++.+ ..|++||+.+ ++. ..+. .+...+..++|+|+|
T Consensus 124 ~~~~~~~~~~~~~~spDg---~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG 199 (662)
T 3azo_A 124 SAVGGGLRWADPVLLPER---GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDG 199 (662)
T ss_dssp CCSTTCEEEEEEEEETTT---TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTS
T ss_pred ccCCCCccccCcEECCCC---CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCC
Confidence 2 23345555543 456666655 5899999987 554 4555 566788899999999
Q ss_pred CEEEEEeCCC--------CEEEEEcC-CC--eEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCC--eEEEEEcCCcceec
Q 009597 383 RRFVTSSDDK--------SLRVWEFG-IP--VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN--QILIYSTRERFQLN 449 (531)
Q Consensus 383 ~~l~s~s~Dg--------~I~iwd~~-~~--~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg--~I~iwd~~~~~~~~ 449 (531)
++|+.++.++ .|++||+. ++ .....+...+...+..++|+|+|++++++..++ .|.+||+.++...
T Consensus 200 ~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~- 278 (662)
T 3azo_A 200 RQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAAT- 278 (662)
T ss_dssp SEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEE-
T ss_pred CEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCcee-
Confidence 9999887553 79999998 56 233444444567889999999999888887888 6666666554322
Q ss_pred eeeeecCCccc------cceEEEEEcCCCCEEEEEeCCCcEEEE--ECCCCeEEEEeeccCCcEEEE-EEecCCCCEEEE
Q 009597 450 KKKRFAGHIVA------GYACQVNFSPDGRFVMSGDGEGKCWFW--DWKSCKVFRTLKCHEGVCIGC-EWHPLEQSKVAT 520 (531)
Q Consensus 450 ~~~~~~~~~~~------~~v~~l~~spdg~~l~sgs~dg~I~iw--d~~~~~~~~~~~~h~~~V~~v-~~~p~~~~~l~t 520 (531)
.+ ..++... ..+..++|+|+++++++++. +.++|| |+.+++ +..+..|.+.+..+ ++++ +.-++++
T Consensus 279 ~l--~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~-~~~~~~~ 353 (662)
T 3azo_A 279 QL--CRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSG-TRAVGVA 353 (662)
T ss_dssp ES--SCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEET-TEEEEEE
T ss_pred ec--ccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCC-CEEEEEE
Confidence 11 1111100 01345889999999999998 998888 666665 67777787777766 4443 2223444
Q ss_pred EeCCCCEEee
Q 009597 521 CGWDGLIKYW 530 (531)
Q Consensus 521 ~s~Dg~I~iW 530 (531)
++.+....||
T Consensus 354 ~~~~~~~~i~ 363 (662)
T 3azo_A 354 ASPRTAYEVV 363 (662)
T ss_dssp EETTEEEEEE
T ss_pred cCCCCCCEEE
Confidence 4555444444
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.61 E-value=1.8e-13 Score=133.33 Aligned_cols=228 Identities=13% Similarity=0.262 Sum_probs=160.1
Q ss_pred hhccCCCCCCCceeeeeecccCeeeEEec------CccCceEEEEE-ccCCCEEEEEec-CCeEEEEeCCCCcEEEEccC
Q 009597 253 EEKGNAGGEKGEHVEDKSTFHGKCMRTYM------GHSKAVRDISF-CNDGTKFLTASY-DKNIKYWDTETGQVIRTFST 324 (531)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~------gH~~~V~~l~f-spdg~~l~s~s~-Dg~I~vWd~~t~~~i~~~~~ 324 (531)
++.+..+...++.|..|+.. ++.+..+. +|...+.++++ .++++++++... ++.|.+|| .+++.+..+..
T Consensus 40 ~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~ 117 (286)
T 1q7f_A 40 QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGA 117 (286)
T ss_dssp TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECT
T ss_pred CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecC
Confidence 33444444445667778765 66666664 35578999999 467776666543 78999999 67777777754
Q ss_pred CC--cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEc--ccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcC
Q 009597 325 GK--IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYD--QHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400 (531)
Q Consensus 325 ~~--~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~--~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~ 400 (531)
.. .+..+.+.+. ++++++...++.|.+||.. ++.+..+. .+...+.+|+++++++++++.+.++.|++||..
T Consensus 118 ~~~~~~~~i~~~~~---g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 118 TILQHPRGVTVDNK---GRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp TTCSCEEEEEECTT---SCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred ccCCCceEEEEeCC---CCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence 33 3444555542 3677777788999999964 55666654 355678999999999988888889999999985
Q ss_pred CCeEEEEeeC-CCCCCccEEEEeCCCCEEEEEEcCC-eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEE
Q 009597 401 IPVVIKYISE-PHMHSMPSISLHPNTNWLAAQSLDN-QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG 478 (531)
Q Consensus 401 ~~~~~~~~~~-~~~~~v~~v~~sp~~~~l~s~s~Dg-~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sg 478 (531)
.. .+..+.. .+...+..++++++|+++++...++ .|.+|+... ..+.. +..+.....+..++++|+|+++++
T Consensus 194 g~-~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~~~~---~~~~~~~~~~~~i~~~~~g~l~vs- 267 (286)
T 1q7f_A 194 GQ-YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLISA---LESKVKHAQCFDVALMDDGSVVLA- 267 (286)
T ss_dssp CC-EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CEEEE---EEESSCCSCEEEEEEETTTEEEEE-
T ss_pred CC-EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CEEEE---EcccCCCCcceeEEECCCCcEEEE-
Confidence 44 4444432 2235678999999999888887776 999999643 33322 222222234678999999987777
Q ss_pred eCCCcEEEEECCCC
Q 009597 479 DGEGKCWFWDWKSC 492 (531)
Q Consensus 479 s~dg~I~iwd~~~~ 492 (531)
+.++.|++|++...
T Consensus 268 ~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 268 SKDYRLYIYRYVQL 281 (286)
T ss_dssp ETTTEEEEEECSCC
T ss_pred CCCCeEEEEEcccc
Confidence 57899999998653
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.61 E-value=1.9e-13 Score=138.60 Aligned_cols=242 Identities=12% Similarity=0.120 Sum_probs=174.1
Q ss_pred CCCceeeeeecccCeeeEEecCc------cCceEEEEEccCCCEEEEEec--CCeEEEEeCCCCcEEEE-ccCCCcceEE
Q 009597 261 EKGEHVEDKSTFHGKCMRTYMGH------SKAVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRT-FSTGKIPYVV 331 (531)
Q Consensus 261 ~~~~~i~~~~~~~~~~~~~l~gH------~~~V~~l~fspdg~~l~s~s~--Dg~I~vWd~~t~~~i~~-~~~~~~~~~~ 331 (531)
..++.|.+|+..+++.+.++..+ ......++|+|||++|+++.. +++|.+||+.+++.+.. +....... +
T Consensus 78 ~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~-v 156 (361)
T 2oiz_A 78 KRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWS-V 156 (361)
T ss_dssp CEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEE-E
T ss_pred CCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcce-e
Confidence 34567889998888888887642 346788999999999998874 58999999999999988 76544322 3
Q ss_pred EEccCCCCCcEEEEeeCCCeEEEEECCC-CceeEE------EcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCe-
Q 009597 332 KLNPDDDKQNILLAGMSDKKIVQWDMNT-KEITQE------YDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPV- 403 (531)
Q Consensus 332 ~~~~~~~~~~~l~sg~~dg~I~iwd~~t-~~~~~~------~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~- 403 (531)
.+.+.. ...+++.+.||.+.+|++.. ++.... +..+..++ .+.+++++..++..+.++.|.++|+....
T Consensus 157 ~~~p~~--~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~ 233 (361)
T 2oiz_A 157 IPQPNR--PRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEV 233 (361)
T ss_dssp EECTTS--SSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSC
T ss_pred EEcCCC--CeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCc
Confidence 344443 35788899999999999865 554422 12222222 33446778888888889999999986542
Q ss_pred -EEEEeeCCC---------CCCccEEEEeCCCCEEEEEEc-----------CCeEEEEEcCCcceeceeeeecCCccccc
Q 009597 404 -VIKYISEPH---------MHSMPSISLHPNTNWLAAQSL-----------DNQILIYSTRERFQLNKKKRFAGHIVAGY 462 (531)
Q Consensus 404 -~~~~~~~~~---------~~~v~~v~~sp~~~~l~s~s~-----------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 462 (531)
....+.... ......++++|+++.++++.. .+.|.+||+.+.+.+.. +..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~---i~~~~---- 306 (361)
T 2oiz_A 234 KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVAR---IPGRD---- 306 (361)
T ss_dssp EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEE---EECTT----
T ss_pred eecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEE---EecCC----
Confidence 222221100 111224789999888877654 35899999998765533 33332
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCC--eEEEEeeccCCcEEEEEEecCC
Q 009597 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSC--KVFRTLKCHEGVCIGCEWHPLE 514 (531)
Q Consensus 463 v~~l~~spdg~~l~sgs~dg~I~iwd~~~~--~~~~~~~~h~~~V~~v~~~p~~ 514 (531)
+..++|+|+|++|++++. +.|.+||..++ +.+.++..+......++++|++
T Consensus 307 p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 667999999999999887 99999999999 9999987677777899999943
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.61 E-value=1.8e-14 Score=146.58 Aligned_cols=252 Identities=10% Similarity=-0.021 Sum_probs=165.8
Q ss_pred eeecccCeeeEEecCccCc-----eEEEEEccCCCEEEEEecC---CeEEEEeCCCCcEEEEccCCCcce-EEEEccCCC
Q 009597 268 DKSTFHGKCMRTYMGHSKA-----VRDISFCNDGTKFLTASYD---KNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDD 338 (531)
Q Consensus 268 ~~~~~~~~~~~~l~gH~~~-----V~~l~fspdg~~l~s~s~D---g~I~vWd~~t~~~i~~~~~~~~~~-~~~~~~~~~ 338 (531)
..+..+++.++.+..+... +.+++|+|||++|+.+... ..|.+||+.+++............ ...|+++
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spd-- 91 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTD-- 91 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTT--
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCC--
Confidence 3455677778888766544 7889999999998877543 478899998887655433222211 2445553
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeE-------------------EEEecCCCEEEEE-----eCCCCE
Q 009597 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNT-------------------ITFVDSNRRFVTS-----SDDKSL 394 (531)
Q Consensus 339 ~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~-------------------l~~sp~~~~l~s~-----s~Dg~I 394 (531)
+..|+.++.++.|++||+.+++....+..+...... +.|+|+++.++.+ ..+..|
T Consensus 92 -g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l 170 (396)
T 3c5m_A 92 -ERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRL 170 (396)
T ss_dssp -SSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEE
T ss_pred -CCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceE
Confidence 357888888889999999988876666545442222 3456666665543 356689
Q ss_pred EEEEcCCCeEEEEeeCCCCCCccEEEEeC-CCCEEEEEEcC------CeEEEEEcCCcceeceeeeecCCccccceEEEE
Q 009597 395 RVWEFGIPVVIKYISEPHMHSMPSISLHP-NTNWLAAQSLD------NQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 467 (531)
Q Consensus 395 ~iwd~~~~~~~~~~~~~~~~~v~~v~~sp-~~~~l~s~s~D------g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~ 467 (531)
.+||+.++....... +...+..+.|+| ++..|+..+.+ ..|.+|++..+... .+..+.....+..+.
T Consensus 171 ~~~d~~~g~~~~~~~--~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 171 IKVDIETGELEVIHQ--DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR----KIKEHAEGESCTHEF 244 (396)
T ss_dssp EEEETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE----ESSCCCTTEEEEEEE
T ss_pred EEEECCCCcEEeecc--CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee----EeeccCCCccccceE
Confidence 999998876654442 556788999999 78877776654 36888888654321 121121123467789
Q ss_pred EcCCCCEEEEEeCC-----CcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEe----------------CCCC
Q 009597 468 FSPDGRFVMSGDGE-----GKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG----------------WDGL 526 (531)
Q Consensus 468 ~spdg~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s----------------~Dg~ 526 (531)
|+|+|++|+.++.+ +.|++||+.+++...... ..+ +. +.|+|.++.+|++++ .++.
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 99999987776543 449999998886544332 222 33 889983344666654 2467
Q ss_pred EEeeC
Q 009597 527 IKYWD 531 (531)
Q Consensus 527 I~iWD 531 (531)
|++||
T Consensus 322 i~~~d 326 (396)
T 3c5m_A 322 LYVLN 326 (396)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88885
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.60 E-value=1.6e-12 Score=139.25 Aligned_cols=273 Identities=10% Similarity=0.054 Sum_probs=193.5
Q ss_pred cCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCC--CCcEEEEccCCCcceEEEE
Q 009597 256 GNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTE--TGQVIRTFSTGKIPYVVKL 333 (531)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~--t~~~i~~~~~~~~~~~~~~ 333 (531)
.......++.+.+++..+++.+.++... ..+..+.|+|||++|++++.|+.|.+||+. +++.+.++..+..+..+.+
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~ 247 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIET 247 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEE
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEE
Confidence 3344456778999999999999888743 357799999999999999999999999996 8899999988888877787
Q ss_pred ccC--CCCCcEEEEeeCCCeEEEEECCCCceeEEEccc----------CC-CeeEEEEecCCCEEE-EEeCCCCEEEEEc
Q 009597 334 NPD--DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQH----------LG-AVNTITFVDSNRRFV-TSSDDKSLRVWEF 399 (531)
Q Consensus 334 ~~~--~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h----------~~-~I~~l~~sp~~~~l~-s~s~Dg~I~iwd~ 399 (531)
++. ++...++++...++.|.++|..+.+.+..+... .. .+..+..++++..++ +...+|.|.++|+
T Consensus 248 s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~ 327 (567)
T 1qks_A 248 SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY 327 (567)
T ss_dssp CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEET
T ss_pred ccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEec
Confidence 731 123355666667799999999999998877532 12 678888888766544 4556789999999
Q ss_pred CCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEE-EE
Q 009597 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS-LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV-MS 477 (531)
Q Consensus 400 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l-~s 477 (531)
.....+.............+.|+|++++|+++. .++.|.++|+.+++.+..+..-......+....+ ++|++..+ ++
T Consensus 328 ~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t 406 (567)
T 1qks_A 328 TDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWAT 406 (567)
T ss_dssp TCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEE
T ss_pred CCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEe
Confidence 876433322222344567889999999988776 5789999999988655443320111111111112 57875544 44
Q ss_pred Ee-CCCcEEEEECCC-------CeEEEEeeccCCcEEEEEEecCCCCEEEEEeC-------CCCEEeeC
Q 009597 478 GD-GEGKCWFWDWKS-------CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW-------DGLIKYWD 531 (531)
Q Consensus 478 gs-~dg~I~iwd~~~-------~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~-------Dg~I~iWD 531 (531)
+. .++.|.++|..+ .+.+.++......-..+..+| ++.+|..... .+.|.++|
T Consensus 407 ~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p-~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 407 SHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHP-NSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp EBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCT-TCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred CCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCC-CCCeEEEecCCCCCcccCceEEEEE
Confidence 43 568999999988 778888886543334567899 6666666542 34777775
No 179
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.60 E-value=2.6e-14 Score=158.97 Aligned_cols=264 Identities=10% Similarity=-0.025 Sum_probs=171.7
Q ss_pred HhhhhccCCCCCCCceeeeeecccCeeeEEecCccCc-----eEEEEEccCCCEEEEEecC---------CeEEEEeCCC
Q 009597 250 KKKEEKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKA-----VRDISFCNDGTKFLTASYD---------KNIKYWDTET 315 (531)
Q Consensus 250 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~-----V~~l~fspdg~~l~s~s~D---------g~I~vWd~~t 315 (531)
+.++++.++.+ ++.|+.|+..++++...+.+|... ..+++|||||++|+.++.+ +.+.+||+.+
T Consensus 24 w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~ 101 (740)
T 4a5s_A 24 WISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK 101 (740)
T ss_dssp ECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCC
Confidence 44445555554 678999999999999888888753 2447899999999998876 5667999999
Q ss_pred CcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEE-cccCCCe-----------------eEEE
Q 009597 316 GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY-DQHLGAV-----------------NTIT 377 (531)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~-~~h~~~I-----------------~~l~ 377 (531)
+++..............|+|++. .|+.+ .++.|++|++.+++..+.. .++...+ ..+.
T Consensus 102 ~~~~~l~~~~~~~~~~~~SPdG~---~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~ 177 (740)
T 4a5s_A 102 RQLITEERIPNNTQWVTWSPVGH---KLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALW 177 (740)
T ss_dssp TEECCSSCCCTTEEEEEECSSTT---CEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEE
T ss_pred CcEEEcccCCCcceeeEECCCCC---EEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceE
Confidence 98765333334455566666543 45555 5789999999888755422 2332222 3589
Q ss_pred EecCCCEEEEEeCCC------------------------------------CEEEEEcCC---Ce--EEEEeeC-----C
Q 009597 378 FVDSNRRFVTSSDDK------------------------------------SLRVWEFGI---PV--VIKYISE-----P 411 (531)
Q Consensus 378 ~sp~~~~l~s~s~Dg------------------------------------~I~iwd~~~---~~--~~~~~~~-----~ 411 (531)
|+|||++|+.++.|. .|++||+.+ +. ....+.. .
T Consensus 178 wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~ 257 (740)
T 4a5s_A 178 WSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLI 257 (740)
T ss_dssp ECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHT
T ss_pred ECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCC
Confidence 999999999876432 478888887 62 2223322 2
Q ss_pred CCCCccEEEEeCCCCEEEEEEcC----CeEEEEEcCCcc----eeceeeee-cCCccccce-----EEEEEcCCCCEEE-
Q 009597 412 HMHSMPSISLHPNTNWLAAQSLD----NQILIYSTRERF----QLNKKKRF-AGHIVAGYA-----CQVNFSPDGRFVM- 476 (531)
Q Consensus 412 ~~~~v~~v~~sp~~~~l~s~s~D----g~I~iwd~~~~~----~~~~~~~~-~~~~~~~~v-----~~l~~spdg~~l~- 476 (531)
+...+..++|+|+|++++..... ..|.+||+.++. +......+ .++. .++ ..+.|+|||+.|+
T Consensus 258 ~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~--~~v~~~~~~~p~fspDG~~l~~ 335 (740)
T 4a5s_A 258 GDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTT--GWVGRFRPSEPHFTLDGNSFYK 335 (740)
T ss_dssp SCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSS--SCSSSSSCCCCEECTTSSEEEE
T ss_pred CCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCC--ceEccCcCCCceEcCCCCEEEE
Confidence 66678999999999977665433 379999998875 22111110 2221 222 2578999999877
Q ss_pred EEe-CC--CcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeC
Q 009597 477 SGD-GE--GKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 523 (531)
Q Consensus 477 sgs-~d--g~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~ 523 (531)
..+ .+ ..|++||..+++... +......|..+.+ ++++.+++++..
T Consensus 336 ~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~~-~d~~~i~f~~~~ 383 (740)
T 4a5s_A 336 IISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIEA-LTSDYLYYISNE 383 (740)
T ss_dssp EEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEEE-ECSSEEEEEESC
T ss_pred EEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEEE-EeCCEEEEEEec
Confidence 554 33 368889988766544 3333445555443 324444555543
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=3.4e-13 Score=135.01 Aligned_cols=237 Identities=11% Similarity=0.038 Sum_probs=158.3
Q ss_pred CceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecC---C--eEEEEeCCCCcEEEEccCCCcceEEEEccCC
Q 009597 263 GEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYD---K--NIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 337 (531)
Q Consensus 263 ~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~D---g--~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~ 337 (531)
...+++++...++.. .+ ..+.+++|+|||++|+.++.+ + .|.+|++.+++......... ...+.|+++
T Consensus 42 ~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspd- 114 (347)
T 2gop_A 42 ENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNED- 114 (347)
T ss_dssp EEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTT-
T ss_pred cceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCC-
Confidence 456778877766543 33 568999999999999887754 2 48888998887766554443 444555553
Q ss_pred CCCcEEEEeeC---------------------------CCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeC
Q 009597 338 DKQNILLAGMS---------------------------DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD 390 (531)
Q Consensus 338 ~~~~~l~sg~~---------------------------dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~ 390 (531)
. ..|+.++. ...|.+||+.+++.+..+.. . .+..+.|+|++ ++++++.
T Consensus 115 -g-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 115 -S-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp -S-SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEEC
T ss_pred -C-CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEec
Confidence 3 34444432 35799999998887455554 3 78999999999 7777765
Q ss_pred CC-------CEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcC--------CeEEEEEcCCcceeceeeeec
Q 009597 391 DK-------SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD--------NQILIYSTRERFQLNKKKRFA 455 (531)
Q Consensus 391 Dg-------~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~D--------g~I~iwd~~~~~~~~~~~~~~ 455 (531)
+. ...||.+.++.. ..+.. + ..+.. ++|+|++|+.++.+ ..|.+|| ++... ....
T Consensus 190 ~~~~~~~~~~~~l~~~d~~~~-~~l~~-~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~---~l~~ 259 (347)
T 2gop_A 190 REIIPQYFKFWDIYIWEDGKE-EKMFE-K-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVM---GILD 259 (347)
T ss_dssp CCSSCCSSCCEEEEEEETTEE-EEEEE-E-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE---ESST
T ss_pred ccccccccccccEEEeCCCce-EEecc-C-cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CCceE---eccc
Confidence 42 345554444443 33332 2 33433 49999999888754 3688888 33211 1222
Q ss_pred CCccccceEE-EEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCE-Eee
Q 009597 456 GHIVAGYACQ-VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLI-KYW 530 (531)
Q Consensus 456 ~~~~~~~v~~-l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I-~iW 530 (531)
++ ...+.. +.|+ ++ ++++++.++.++|| +.+++.. .+..+.+.|.+++|+| .++++++.++.. .||
T Consensus 260 ~~--~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 260 EV--DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMGFDVDE---IVVYLKETATRLRELF 327 (347)
T ss_dssp TC--CSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEE-EEECSSSEEEEEEESS---SEEEEEECSSSCCEEE
T ss_pred cC--CcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceE-EEecCCCeEEeeeeeC---cEEEEEcCCCChHHhe
Confidence 32 233554 8899 88 88999999999999 8766654 3444577899999998 577777777654 555
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.60 E-value=1.7e-13 Score=151.53 Aligned_cols=244 Identities=10% Similarity=0.052 Sum_probs=166.6
Q ss_pred CccCceEEEEEccCCCEEEEEecCC-----eEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCe-----
Q 009597 282 GHSKAVRDISFCNDGTKFLTASYDK-----NIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK----- 351 (531)
Q Consensus 282 gH~~~V~~l~fspdg~~l~s~s~Dg-----~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~----- 351 (531)
+|...+..++|||||++|+.++.++ .|++||+.+++.+...........+.|++++ ..|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg---~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDG---KGMFYNAYPQQDGKSD 198 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTS---SEEEEEECCCCSSCCS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCC---CEEEEEEECCcccccc
Confidence 4555789999999999998766543 8999999999887643222223445666643 45666666554
Q ss_pred -----------EEEEECCCCce--eEEEc--ccCCCeeEEEEecCCCEEEEEeC-----CCCEEEEEcCC------Ce-E
Q 009597 352 -----------IVQWDMNTKEI--TQEYD--QHLGAVNTITFVDSNRRFVTSSD-----DKSLRVWEFGI------PV-V 404 (531)
Q Consensus 352 -----------I~iwd~~t~~~--~~~~~--~h~~~I~~l~~sp~~~~l~s~s~-----Dg~I~iwd~~~------~~-~ 404 (531)
|++|++.++.. ...+. .|...+..+.|+|+|++|+.++. +..|++||+.+ +. .
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 99999988763 23333 34556889999999999888765 56899999976 42 2
Q ss_pred EEEeeCCCCCCccEEEEeCCCCEEEEEEcCC----eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeC
Q 009597 405 IKYISEPHMHSMPSISLHPNTNWLAAQSLDN----QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 480 (531)
Q Consensus 405 ~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg----~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~ 480 (531)
...+.. +...+.. .|+|+|..|+..+..+ .|.+||+.++... ....+..+.....+..++|++++.++++...
T Consensus 279 ~~~l~~-~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 279 WVKLID-NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES-KWKVLVPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp CEEEEC-SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGG-GCEEEECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred eEEeeC-CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-cceeccCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 333433 3334433 5888998888776543 6999998775310 1122333322234667889888888888888
Q ss_pred CCc--EEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeC---CCCEEeeC
Q 009597 481 EGK--CWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW---DGLIKYWD 531 (531)
Q Consensus 481 dg~--I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~---Dg~I~iWD 531 (531)
++. |++||+.+++.+..+..+.+.+..+.++|++..++++.+. .+.|.+||
T Consensus 356 ~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 356 DVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp TTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEE
T ss_pred CCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEE
Confidence 884 6677887888888888888888999999944444544443 45677775
No 182
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.59 E-value=9.1e-14 Score=140.95 Aligned_cols=235 Identities=11% Similarity=0.096 Sum_probs=151.3
Q ss_pred hhhhccCCCCCCCceeeeeecc-cCeeeEEecCc-cCceEEEEEccCCCE--EEEEe-------------cCCeEEEEeC
Q 009597 251 KKEEKGNAGGEKGEHVEDKSTF-HGKCMRTYMGH-SKAVRDISFCNDGTK--FLTAS-------------YDKNIKYWDT 313 (531)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~l~gH-~~~V~~l~fspdg~~--l~s~s-------------~Dg~I~vWd~ 313 (531)
+++++.+.....+ .+.+|+.. ++++....... .+.+.+++|+|+|++ +++++ .++.+.+|++
T Consensus 48 spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~ 126 (365)
T 1jof_A 48 DHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSV 126 (365)
T ss_dssp CTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEE
T ss_pred CCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEcc
Confidence 3444433333333 78888876 67665433211 123667999999994 44553 6899999999
Q ss_pred C-CCcEEEEcc-----CCCcceEEEEccCCCCCcEEEEee-CCCeEEEEECC-CCcee--EEEc--ccCCCeeEEEEecC
Q 009597 314 E-TGQVIRTFS-----TGKIPYVVKLNPDDDKQNILLAGM-SDKKIVQWDMN-TKEIT--QEYD--QHLGAVNTITFVDS 381 (531)
Q Consensus 314 ~-t~~~i~~~~-----~~~~~~~~~~~~~~~~~~~l~sg~-~dg~I~iwd~~-t~~~~--~~~~--~h~~~I~~l~~sp~ 381 (531)
. +++....+. ....+..+.++++. .+++++. .++.|.+|++. +++.. ..+. .|...+..++|+|+
T Consensus 127 ~~~g~~~~~~~~~~~~~~~~~~~~~~spdG---~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spd 203 (365)
T 1jof_A 127 SETGKLEKNVQNYEYQENTGIHGMVFDPTE---TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPT 203 (365)
T ss_dssp CTTCCEEEEEEEEECCTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTT
T ss_pred CCCCcCcceEeeEEeCCCCcceEEEECCCC---CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCC
Confidence 7 466554443 23345556666643 3455544 57899999998 67653 3333 24567899999999
Q ss_pred CCEEEEEeC-CCCEEEEEcC--CCeEE---EEeeC-C-----CCC------CccEEE-EeCCCCEEEEEEcCC------e
Q 009597 382 NRRFVTSSD-DKSLRVWEFG--IPVVI---KYISE-P-----HMH------SMPSIS-LHPNTNWLAAQSLDN------Q 436 (531)
Q Consensus 382 ~~~l~s~s~-Dg~I~iwd~~--~~~~~---~~~~~-~-----~~~------~v~~v~-~sp~~~~l~s~s~Dg------~ 436 (531)
|+++++++. ++.|.+|++. ++... ..+.. + +.. .+..++ |+|+|++|+++..+. .
T Consensus 204 g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~ 283 (365)
T 1jof_A 204 GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGY 283 (365)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCE
T ss_pred CCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCe
Confidence 999888775 6899999875 44432 12221 1 111 477899 999999988776543 8
Q ss_pred EEEEEcC-Ccceeceee-eecCCccccceEEEEEcC---CCCEEEEEeCC-CcEEEEECCCC
Q 009597 437 ILIYSTR-ERFQLNKKK-RFAGHIVAGYACQVNFSP---DGRFVMSGDGE-GKCWFWDWKSC 492 (531)
Q Consensus 437 I~iwd~~-~~~~~~~~~-~~~~~~~~~~v~~l~~sp---dg~~l~sgs~d-g~I~iwd~~~~ 492 (531)
|.+|++. ++. +.... ....+ ...+..++|+| +|++|++++.+ +.|.+|++...
T Consensus 284 i~v~~~~~~g~-~~~~~~~~~~~--~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 284 IAGFKLRDCGS-IEKQLFLSPTP--TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEECTTSC-EEEEEEEEECS--SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEEEEECCCCC-EEEeeeeeecC--CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 9999986 333 22111 12112 11233488999 89999998864 89999998765
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=8.7e-13 Score=127.04 Aligned_cols=235 Identities=6% Similarity=-0.020 Sum_probs=161.9
Q ss_pred ceEEEEEccCCCEEE-EEecCCeEEEEeCCCCcEEEEcc-CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCcee
Q 009597 286 AVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFS-TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT 363 (531)
Q Consensus 286 ~V~~l~fspdg~~l~-s~s~Dg~I~vWd~~t~~~i~~~~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~ 363 (531)
...+|+++++|++++ +.+.++.|.+|+..++....... ....+..+.+.+. ++++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~---g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGA---GTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTT---CCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCC---CCEEEEcC-CCEEEEEeCCCceEe
Confidence 678999999998666 44678899999986654332211 1234455556543 34555555 889999998765443
Q ss_pred EEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcC
Q 009597 364 QEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443 (531)
Q Consensus 364 ~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~ 443 (531)
.........+.++++.++++.+++...++.|.+|+..+....... ......+.+++++++++++++...++.|.+|+..
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC-CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec-cccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 222223367899999999998888778889999987655433222 2233467899999999977776678899999987
Q ss_pred CcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeC
Q 009597 444 ERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 523 (531)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~ 523 (531)
...... ..... ...+..++++++|.++++...++.|.+||............+...+.++++++ ++.++++...
T Consensus 180 ~~~~~~---~~~~~--~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~ 253 (270)
T 1rwi_B 180 SNNQVV---LPFTD--ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS-DRTVYVADRG 253 (270)
T ss_dssp TCCEEE---CCCSS--CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECT-TCCEEEEEGG
T ss_pred CCceEe---ecccC--CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECC-CCCEEEEECC
Confidence 654321 11111 14477899999998887777888999999876554332223345689999999 5678888888
Q ss_pred CCCEEeeC
Q 009597 524 DGLIKYWD 531 (531)
Q Consensus 524 Dg~I~iWD 531 (531)
++.|++++
T Consensus 254 ~~~v~~~~ 261 (270)
T 1rwi_B 254 NDRVVKLT 261 (270)
T ss_dssp GTEEEEEC
T ss_pred CCEEEEEc
Confidence 99999885
No 184
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.56 E-value=7.2e-13 Score=132.41 Aligned_cols=222 Identities=11% Similarity=0.177 Sum_probs=161.7
Q ss_pred CceeeeeecccCeeeEEec-CccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc-EEEEccC--------CC--cceE
Q 009597 263 GEHVEDKSTFHGKCMRTYM-GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ-VIRTFST--------GK--IPYV 330 (531)
Q Consensus 263 ~~~i~~~~~~~~~~~~~l~-gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~-~i~~~~~--------~~--~~~~ 330 (531)
++.+.+++..+++.+..+. ++-....+|+++++|+++++...++.|++|+..... .+..+.. .. .+..
T Consensus 68 ~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred CCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcE
Confidence 4578888888888887765 566789999999999988888889999999986542 4555421 11 2444
Q ss_pred EEEccCCCCCcEEEEee-CCCeEEEEECCCCceeEEEcc----------cCCCeeEEEEecC-CCEEEEEeCCCCEEEEE
Q 009597 331 VKLNPDDDKQNILLAGM-SDKKIVQWDMNTKEITQEYDQ----------HLGAVNTITFVDS-NRRFVTSSDDKSLRVWE 398 (531)
Q Consensus 331 ~~~~~~~~~~~~l~sg~-~dg~I~iwd~~t~~~~~~~~~----------h~~~I~~l~~sp~-~~~l~s~s~Dg~I~iwd 398 (531)
+.+.+ ..+.++++.+ .++.|++|+ .++..+..+.. +......|+++|+ +.++++...++.|++||
T Consensus 148 ia~~~--~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~ 224 (329)
T 3fvz_A 148 VAVEP--STGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFK 224 (329)
T ss_dssp EEECT--TTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeC--CCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEE
Confidence 55554 2346777776 699999999 56777777642 2344889999998 77777777889999999
Q ss_pred cCCCeEEEEeeC-CCCCCccEEEEeCCCCEEEE-------EEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcC
Q 009597 399 FGIPVVIKYISE-PHMHSMPSISLHPNTNWLAA-------QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP 470 (531)
Q Consensus 399 ~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~l~s-------~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp 470 (531)
..+++.+..+.. .+...+.+++++| +..+++ ...+..|++|+..++..+..+....++ ...+..|+++|
T Consensus 225 ~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~--~~~p~~ia~~~ 301 (329)
T 3fvz_A 225 TDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKH--FDMPHDIVASE 301 (329)
T ss_dssp TTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSC--CSSEEEEEECT
T ss_pred CCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCc--cCCeeEEEECC
Confidence 998877777643 3455678899999 333333 233458999999887655443221233 24477899999
Q ss_pred CCCEEEEEeCCCcEEEEECC
Q 009597 471 DGRFVMSGDGEGKCWFWDWK 490 (531)
Q Consensus 471 dg~~l~sgs~dg~I~iwd~~ 490 (531)
+|.++++...++.|++|++.
T Consensus 302 dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 302 DGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp TSEEEEEESSSCCEEEEEEE
T ss_pred CCCEEEEECCCCEEEEEeCC
Confidence 99888888889999999864
No 185
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.52 E-value=3.6e-12 Score=125.44 Aligned_cols=243 Identities=12% Similarity=0.128 Sum_probs=161.5
Q ss_pred ecCccCceEEEEEccCCCEEEE-------EecCCeEEEEeCCCCcEEEEcc-----CCCcceEEEEccCCCCCcEEEEee
Q 009597 280 YMGHSKAVRDISFCNDGTKFLT-------ASYDKNIKYWDTETGQVIRTFS-----TGKIPYVVKLNPDDDKQNILLAGM 347 (531)
Q Consensus 280 l~gH~~~V~~l~fspdg~~l~s-------~s~Dg~I~vWd~~t~~~i~~~~-----~~~~~~~~~~~~~~~~~~~l~sg~ 347 (531)
+...-....+++|+++++++++ +..++.|.+||..+++...... ....+..+.+.+ +.++++++.
T Consensus 13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~--~~g~l~v~~- 89 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR--DANQLFVAD- 89 (314)
T ss_dssp EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS--SSSEEEEEE-
T ss_pred hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEec--CCCcEEEEE-
Confidence 3444556789999999987777 5778999999988887653322 112233444443 213444444
Q ss_pred CCCeEEEEECCCCceeEE-Ecc----cCCCeeEEEEecCCCEEEEEeCC---------------CCEEEEEcCCCeEEEE
Q 009597 348 SDKKIVQWDMNTKEITQE-YDQ----HLGAVNTITFVDSNRRFVTSSDD---------------KSLRVWEFGIPVVIKY 407 (531)
Q Consensus 348 ~dg~I~iwd~~t~~~~~~-~~~----h~~~I~~l~~sp~~~~l~s~s~D---------------g~I~iwd~~~~~~~~~ 407 (531)
..+.|.+||.. ++.... ... +...+.++++.++++++++...+ +.|..||.. +.....
T Consensus 90 ~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 90 MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 44579999998 665433 221 12458899999999988877655 467777765 443332
Q ss_pred eeCCCCCCccEEEEe----CCCCEEEEE-EcCCeEEEEEcC-Cccee--ceeeeecCCccccceEEEEEcCCCCEEEEEe
Q 009597 408 ISEPHMHSMPSISLH----PNTNWLAAQ-SLDNQILIYSTR-ERFQL--NKKKRFAGHIVAGYACQVNFSPDGRFVMSGD 479 (531)
Q Consensus 408 ~~~~~~~~v~~v~~s----p~~~~l~s~-s~Dg~I~iwd~~-~~~~~--~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs 479 (531)
.. +......++++ |+++.|+++ ..++.|.+|+.. .+... .....+.++. ...+..++++++|+++++..
T Consensus 168 ~~--~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 168 DT--AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH-EGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp EE--EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS-SCEEEEEEEBTTCCEEEEEE
T ss_pred cc--CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC-CCCCCceEECCCCCEEEEEc
Confidence 22 23446788999 999766555 457899999976 32211 1112222221 03466799999999888887
Q ss_pred CCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCC-EEEEEeCCCCEEeeC
Q 009597 480 GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS-KVATCGWDGLIKYWD 531 (531)
Q Consensus 480 ~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~-~l~t~s~Dg~I~iWD 531 (531)
.++.|.+||..+++.+..+..+...+.+++++| ++. ++++...++.|..||
T Consensus 245 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~-dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKP-QTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp TTTEEEEECTTCBSCSEEEECSSSCEEEEEECT-TSSEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEcCCCCcEeEEEeCCCCCceeEEECC-CCCEEEEEeCCCCeEEEEe
Confidence 889999999987887777777777899999998 566 555555667787764
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.52 E-value=5.6e-12 Score=122.82 Aligned_cols=246 Identities=12% Similarity=0.036 Sum_probs=181.9
Q ss_pred hccCCCCCCCceeeeeecccCeeeEEecCcc-CceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEE
Q 009597 254 EKGNAGGEKGEHVEDKSTFHGKCMRTYMGHS-KAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 332 (531)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~-~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~ 332 (531)
+++++.+..++.+.+|+..+|+.+.++..|. ..+.++.++|+|++|+ +.++.|..||. +++.+..+..+.......
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 3556677888999999999999999999887 5899999999999888 45788999999 899999998754333333
Q ss_pred EccCCCCCcEEEEeeC-CCeEEEEECCCCceeEEEcc------cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEE
Q 009597 333 LNPDDDKQNILLAGMS-DKKIVQWDMNTKEITQEYDQ------HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVI 405 (531)
Q Consensus 333 ~~~~~~~~~~l~sg~~-dg~I~iwd~~t~~~~~~~~~------h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~ 405 (531)
..+.. +++++++.+. ++.|..+|. +++.+..+.. +......+.+.++|+++++.+.++.|.+||.. ++.+
T Consensus 82 ~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 82 ARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred cEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 33333 3467777776 788888886 6777776642 22345667889999999999999999999998 8777
Q ss_pred EEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeee--cCCccccceEEEEEcCCCCEEEEEeCC--
Q 009597 406 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF--AGHIVAGYACQVNFSPDGRFVMSGDGE-- 481 (531)
Q Consensus 406 ~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~--~~~~~~~~v~~l~~spdg~~l~sgs~d-- 481 (531)
..+.. ...+.++...++++++++++.++.|..+|..++..+...... .+. .-..+..+...++|.++++....
T Consensus 159 w~~~~--~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~-~l~~~~~~~~~~~G~i~v~~~~g~~ 235 (276)
T 3no2_A 159 NSVKL--SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGV-QLFFVAQLFPLQNGGLYICNWQGHD 235 (276)
T ss_dssp EEEEC--SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSC-CCSEEEEEEECTTSCEEEEEECTTC
T ss_pred EEEEC--CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCc-cccccccceEcCCCCEEEEeccCcc
Confidence 77654 245667888899999999888889999999887766554321 111 12346778899999998887421
Q ss_pred ------CcEEEEEC-CCCeEEEEeeccC--CcEEEE
Q 009597 482 ------GKCWFWDW-KSCKVFRTLKCHE--GVCIGC 508 (531)
Q Consensus 482 ------g~I~iwd~-~~~~~~~~~~~h~--~~V~~v 508 (531)
+..+++.+ .+++.+.++..+. +.+.++
T Consensus 236 ~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~ 271 (276)
T 3no2_A 236 REAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTI 271 (276)
T ss_dssp TTGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEE
T ss_pred ccccccCCceEEEECCCCCEEEEecCcccccceeee
Confidence 23455655 5888888886543 344444
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.52 E-value=3.5e-13 Score=148.69 Aligned_cols=241 Identities=9% Similarity=-0.031 Sum_probs=155.7
Q ss_pred CccCceEEEEEccCCCEEE-----EEecCCeEEEEeCCCCcEE-EEccCCCcceEEEEccCCCCCcEEEEeeCCCe----
Q 009597 282 GHSKAVRDISFCNDGTKFL-----TASYDKNIKYWDTETGQVI-RTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK---- 351 (531)
Q Consensus 282 gH~~~V~~l~fspdg~~l~-----s~s~Dg~I~vWd~~t~~~i-~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~---- 351 (531)
+|...+.+++|||||++|+ +|+.+..|++||+.+++.+ ...........+.|++++ ..|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg---~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDS---KGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTS---SEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCC---CEEEEEEecCCCCCc
Confidence 5666899999999999988 3444568999999999865 211111111445566543 46777776665
Q ss_pred ---------EEEEECCCCc----eeEEEcccCCCeeEEEEecCCCEEEEEeCCC----CEEEEEcCCCeEEEEeeCCCCC
Q 009597 352 ---------IVQWDMNTKE----ITQEYDQHLGAVNTITFVDSNRRFVTSSDDK----SLRVWEFGIPVVIKYISEPHMH 414 (531)
Q Consensus 352 ---------I~iwd~~t~~----~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg----~I~iwd~~~~~~~~~~~~~~~~ 414 (531)
|++|++.++. ++.....|...+.++.|+|+|++|+.++.++ .|.+|+...+.... +.. +..
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~-l~~-~~~ 272 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRL-LVK-GVG 272 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEE-EEE-CSS
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEE-eec-CCC
Confidence 9999998876 2333334556789999999999988877666 67777665543332 322 334
Q ss_pred CccEEEEeCCCCEEEEEEc----CCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 009597 415 SMPSISLHPNTNWLAAQSL----DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 490 (531)
Q Consensus 415 ~v~~v~~sp~~~~l~s~s~----Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~ 490 (531)
.+....+ +++. |+..+. ++.|.+||+.++... ....+..+.....+..++|+ ++.++++...++..+||.+.
T Consensus 273 ~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 273 AKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARA-SWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp CCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGG-GCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred ceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCcc-CCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 4555555 5566 544443 578999998765321 11222222212346667887 77788888899988777554
Q ss_pred -CCeEEEEeecc-CCcEEEEEEecCCCCEEEEEeC---CCCEEeeC
Q 009597 491 -SCKVFRTLKCH-EGVCIGCEWHPLEQSKVATCGW---DGLIKYWD 531 (531)
Q Consensus 491 -~~~~~~~~~~h-~~~V~~v~~~p~~~~~l~t~s~---Dg~I~iWD 531 (531)
.++....+..+ .+.+..+.++|++..++++.+. .+.|++||
T Consensus 349 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d 394 (695)
T 2bkl_A 349 LKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTS 394 (695)
T ss_dssp TTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEE
T ss_pred CCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 46666667655 6677888899844444444433 46688775
No 188
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.52 E-value=2.7e-11 Score=117.89 Aligned_cols=239 Identities=10% Similarity=-0.017 Sum_probs=165.4
Q ss_pred EecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEc-c-CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEE
Q 009597 279 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-S-TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 356 (531)
Q Consensus 279 ~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~-~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd 356 (531)
.+..+...+.+|++.++|+++++...++.|.+||.. ++..... . ....+..+.+.+ .+.++++...++.|..||
T Consensus 9 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~---~g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISS---DGEVWFTENAANKIGRIT 84 (299)
T ss_dssp ECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT---TSCEEEEETTTTEEEEEC
T ss_pred cCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECC---CCCEEEeCCCCCeEEEEC
Confidence 345566789999999999877766667899999988 6544322 1 123334444443 345677766688999999
Q ss_pred CCCCceeEEEc--ccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcC
Q 009597 357 MNTKEITQEYD--QHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD 434 (531)
Q Consensus 357 ~~t~~~~~~~~--~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~D 434 (531)
.. ++. ..+. .....+.++++.++++++++...++.|.+||. .+.............+..+++.+++.++++...+
T Consensus 85 ~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 161 (299)
T 2z2n_A 85 KK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQN 161 (299)
T ss_dssp TT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred CC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCC
Confidence 86 332 3332 24567899999999988888877889999998 5444333322245568899999999887776667
Q ss_pred CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE-eeccCCcEEEEEEecC
Q 009597 435 NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRT-LKCHEGVCIGCEWHPL 513 (531)
Q Consensus 435 g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~-~~~h~~~V~~v~~~p~ 513 (531)
+.|.+||. ++... .. ..... ...+..++++++|.++++...++.|.+||. +++.... +..+...+.++++++
T Consensus 162 ~~i~~~~~-~g~~~-~~-~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~- 234 (299)
T 2z2n_A 162 NAIGRITE-SGDIT-EF-KIPTP--ASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGA- 234 (299)
T ss_dssp TEEEEECT-TCCEE-EE-ECSST--TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECS-
T ss_pred CEEEEEcC-CCcEE-Ee-eCCCC--CCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECC-
Confidence 89999998 44322 11 11111 234678999999998777777889999998 6664332 233456788999998
Q ss_pred CCCEEEEEeCCCCEEeeC
Q 009597 514 EQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 514 ~~~~l~t~s~Dg~I~iWD 531 (531)
++.++++...++.|.+||
T Consensus 235 ~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 235 GIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp TTCEEEEETTTTEEEEEE
T ss_pred CCCEEEeccCCceEEEEC
Confidence 566666665677788775
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.52 E-value=8.5e-12 Score=121.52 Aligned_cols=212 Identities=10% Similarity=0.023 Sum_probs=162.5
Q ss_pred CCCEEEEEecCCeEEEEeCCCCcEEEEccCCC--cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccC-C
Q 009597 295 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGK--IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHL-G 371 (531)
Q Consensus 295 dg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~--~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~-~ 371 (531)
.+++|++++.|+.|.+||.++|+.+.++..+. ....+.+.++ +++++ +.++.|..||. +++.+..+..+. .
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pd---G~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKA---GEILF--SYSKGAKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTT---SCEEE--ECBSEEEEECT-TSCEEEEEECCTTC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCC---CCEEE--eCCCCEEEECC-CCCEEEEEcCCCCc
Confidence 35789999999999999999999999998764 4555666653 35666 45788999999 899999998753 5
Q ss_pred CeeEEEEecCCCEEEEEeC-CCCEEEEEcCCCeEEEEeeCC-----CCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCc
Q 009597 372 AVNTITFVDSNRRFVTSSD-DKSLRVWEFGIPVVIKYISEP-----HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445 (531)
Q Consensus 372 ~I~~l~~sp~~~~l~s~s~-Dg~I~iwd~~~~~~~~~~~~~-----~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~ 445 (531)
.+.++.+.++|+.+++.+. ++.|..+|. .++.+..+... +......+++.++|+++++...++.|.+||.. +
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 7889999999999999887 777877776 55555544321 11245567888999999999999999999987 6
Q ss_pred ceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccC------CcEEEEEEecCCCCEEE
Q 009597 446 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE------GVCIGCEWHPLEQSKVA 519 (531)
Q Consensus 446 ~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~------~~V~~v~~~p~~~~~l~ 519 (531)
+.+..... . ..+..+.+.++|+++++++.++.|..+|..+++.+.++..+. ..+..+...+ ++.+++
T Consensus 156 ~~~w~~~~---~---~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~-~G~i~v 228 (276)
T 3no2_A 156 QLLNSVKL---S---GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ-NGGLYI 228 (276)
T ss_dssp CEEEEEEC---S---SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT-TSCEEE
T ss_pred CEEEEEEC---C---CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC-CCCEEE
Confidence 55544332 1 123347788999999999988899999999999999887442 1267888888 677776
Q ss_pred EE
Q 009597 520 TC 521 (531)
Q Consensus 520 t~ 521 (531)
+.
T Consensus 229 ~~ 230 (276)
T 3no2_A 229 CN 230 (276)
T ss_dssp EE
T ss_pred Ee
Confidence 66
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.51 E-value=4.2e-12 Score=126.97 Aligned_cols=217 Identities=12% Similarity=0.089 Sum_probs=147.4
Q ss_pred CceEEEEEccCCCEEEEEe---------cCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCC---C--
Q 009597 285 KAVRDISFCNDGTKFLTAS---------YDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD---K-- 350 (531)
Q Consensus 285 ~~V~~l~fspdg~~l~s~s---------~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d---g-- 350 (531)
..+..+++ ||++++... .++.|.+||+.+++.... .......|++++ ..|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg---~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDG---KKIAFMRANEEKKVS 85 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTS---SEEEEEEEETTTTEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCC---CEEEEEEeccCCCcc
Confidence 45677777 888777542 367899999998875443 334556666644 345544432 3
Q ss_pred eEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCC---------------------------CCEEEEEcCCCe
Q 009597 351 KIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD---------------------------KSLRVWEFGIPV 403 (531)
Q Consensus 351 ~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~D---------------------------g~I~iwd~~~~~ 403 (531)
.|.+||+.+++.......+ . +..+.|+|+++.|+.++.+ ..|.+||+.++.
T Consensus 86 ~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred eEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 4888899888766655444 3 9999999999998888743 569999999887
Q ss_pred EEEEeeCCCCCCccEEEEeCCCCEEEEEEcCC-------eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEE
Q 009597 404 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDN-------QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 476 (531)
Q Consensus 404 ~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg-------~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~ 476 (531)
.+..+.. . .+..++|+|+| +++++..++ ...||.+.++. ... +..+ ..+.. ++|+|++|+
T Consensus 164 ~~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~---l~~~---~~~~~--~spdg~~l~ 230 (347)
T 2gop_A 164 VIEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEK---MFEK---VSFYA--VDSDGERIL 230 (347)
T ss_dssp EEEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEE---EEEE---ESEEE--EEECSSCEE
T ss_pred EEeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEE---eccC---cceee--ECCCCCEEE
Confidence 7444443 2 78899999999 777776542 33444443332 222 2212 22333 399999988
Q ss_pred EEeCC--------CcEEEEECCCCeEEEEeeccCCcEEE-EEEecCCCCEEEEEeCCCCEEee
Q 009597 477 SGDGE--------GKCWFWDWKSCKVFRTLKCHEGVCIG-CEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 477 sgs~d--------g~I~iwd~~~~~~~~~~~~h~~~V~~-v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
.++.+ ..|++|| +++.......|...+.. +.|+ ++ ++++++.++.++||
T Consensus 231 ~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s--dg-~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 231 LYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD--GK-VYFTLFEEGSVNLY 288 (347)
T ss_dssp EEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET--TE-EEEEEEETTEEEEE
T ss_pred EEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc--Cc-EEEEEecCCcEEEE
Confidence 77643 4688888 66655555566777886 8898 44 88999999999987
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.49 E-value=8.4e-11 Score=114.37 Aligned_cols=259 Identities=12% Similarity=0.068 Sum_probs=170.2
Q ss_pred hccCCCCCCCceeeeeecccCeeeE-EecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEcc---CCCcce
Q 009597 254 EKGNAGGEKGEHVEDKSTFHGKCMR-TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS---TGKIPY 329 (531)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~~~~~-~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~---~~~~~~ 329 (531)
+.+..+...++.+..++.. ++... .+..+...+.+|+++++|.++++...++.|..|+.. ++. ..+. ....+.
T Consensus 26 g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~ 102 (299)
T 2z2n_A 26 GKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPY 102 (299)
T ss_dssp SCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEE
T ss_pred CCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCce
Confidence 3333333334566677665 44332 223456789999999999877777768899999986 443 2222 222344
Q ss_pred EEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEE-EcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEe
Q 009597 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE-YDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYI 408 (531)
Q Consensus 330 ~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~-~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~ 408 (531)
.+.+.+ .+.++++...++.|.+||. +++.... ...+...+.++++.++++.+++...++.|.+||. ++......
T Consensus 103 ~i~~~~---~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~ 177 (299)
T 2z2n_A 103 GITEGP---NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFK 177 (299)
T ss_dssp EEEECT---TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEE
T ss_pred eeEECC---CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEee
Confidence 444443 3467777777889999998 5554432 2334567899999999988887777889999998 55544332
Q ss_pred eCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 009597 409 SEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488 (531)
Q Consensus 409 ~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd 488 (531)
.......+.++++++++.++++...++.|.+|+. ++... .. .... ....+..++++++|+++++...++.|.+||
T Consensus 178 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~-~~~~--~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 178 IPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EF-KIPT--PNARPHAITAGAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EE-ECSS--TTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred CCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EE-ECCC--CCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence 2224456789999999987776666889999998 54321 11 1121 134577899999999777766788999999
Q ss_pred CCCCeEEEE-eeccCCcEEEEEEecCCCCEEEEEeCCCCEE
Q 009597 489 WKSCKVFRT-LKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 528 (531)
Q Consensus 489 ~~~~~~~~~-~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~ 528 (531)
. +++.... +..+...+.++++ + ++.++++.+.++.++
T Consensus 253 ~-~g~~~~~~~~~~~~~~~~i~~-~-~g~l~v~~~~~~l~~ 290 (299)
T 2z2n_A 253 S-NNIIEEYPIQIKSAEPHGICF-D-GETIWFAMECDKIGK 290 (299)
T ss_dssp T-TTEEEEEECSSSSCCEEEEEE-C-SSCEEEEETTTEEEE
T ss_pred C-CCceEEEeCCCCCCccceEEe-c-CCCEEEEecCCcEEE
Confidence 8 4543322 2344567889999 6 677666655444433
No 192
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.48 E-value=9.6e-11 Score=115.07 Aligned_cols=236 Identities=11% Similarity=0.077 Sum_probs=156.3
Q ss_pred EecCccCceEEEEEccC-CCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEEC
Q 009597 279 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 357 (531)
Q Consensus 279 ~l~gH~~~V~~l~fspd-g~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~ 357 (531)
.+..+..-..+..|+++ +.++++...++.|..||..++.. ..+.....+..+.+.++. .+++ +. ++.|.+||.
T Consensus 7 ~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG---~l~v-~~-~~~l~~~d~ 80 (297)
T 3g4e_A 7 VLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSG---GYVA-TI-GTKFCALNW 80 (297)
T ss_dssp EECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTS---SEEE-EE-TTEEEEEET
T ss_pred EeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCC---CEEE-EE-CCeEEEEEC
Confidence 34445556778999995 55666777789999999988765 344444555556655432 4444 44 578999999
Q ss_pred CCCceeEEEcc----cCCCeeEEEEecCCCEEEEEeCC---------CCEEEEEcCC-CeEEEEeeCCCCCCccEEEEeC
Q 009597 358 NTKEITQEYDQ----HLGAVNTITFVDSNRRFVTSSDD---------KSLRVWEFGI-PVVIKYISEPHMHSMPSISLHP 423 (531)
Q Consensus 358 ~t~~~~~~~~~----h~~~I~~l~~sp~~~~l~s~s~D---------g~I~iwd~~~-~~~~~~~~~~~~~~v~~v~~sp 423 (531)
.+++....... ....++.+++.|+|+++++.... ....||.+.. +.... +.. .......++|+|
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~-~~~~pngi~~sp 158 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFD-QVDISNGLDWSL 158 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEE-EESBEEEEEECT
T ss_pred CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-Eee-ccccccceEEcC
Confidence 88765443322 12457899999999977765332 2345555543 22222 221 234467899999
Q ss_pred CCCEEEEE-EcCCeEEEEEcC--Ccceec--eeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q 009597 424 NTNWLAAQ-SLDNQILIYSTR--ERFQLN--KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498 (531)
Q Consensus 424 ~~~~l~s~-s~Dg~I~iwd~~--~~~~~~--~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~ 498 (531)
+++.|+.+ +.++.|.+|++. ++.... ....+.. ..+.+..++++++|++.++....+.|.+||..+++.+..+
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~--~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK--EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG--GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC--CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEE
Confidence 99877554 457899999873 332211 1111111 1245677999999998888878889999999999999999
Q ss_pred eccCCcEEEEEEe-cCCCCEEEEEeCC
Q 009597 499 KCHEGVCIGCEWH-PLEQSKVATCGWD 524 (531)
Q Consensus 499 ~~h~~~V~~v~~~-p~~~~~l~t~s~D 524 (531)
..+...+++++|. |+...+++|...+
T Consensus 237 ~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 237 KLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred ECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 8887789999998 7444455555544
No 193
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.48 E-value=3.5e-12 Score=126.94 Aligned_cols=233 Identities=10% Similarity=0.072 Sum_probs=161.8
Q ss_pred CceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCcee
Q 009597 285 KAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT 363 (531)
Q Consensus 285 ~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~ 363 (531)
..|.+++|++++..++..+.++.+++| .++....+..+ ..+..+.+.+ .+.+++++..++.|.+||..+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDR---QGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECT---TSCEEEEETTTCEEEEECTTTCCEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECC---CCCEEEEECCCCEEEEEeCCCCcEE
Confidence 457888999988777777888999999 34455554332 3344555543 3457778888999999999988876
Q ss_pred EEEcccCCCeeEEEEecCCCEEEEEeCC----CCEEEEEcCCCeEEEEee-CCCCCCccEEEEeCCCCEEEEEEc-----
Q 009597 364 QEYDQHLGAVNTITFVDSNRRFVTSSDD----KSLRVWEFGIPVVIKYIS-EPHMHSMPSISLHPNTNWLAAQSL----- 433 (531)
Q Consensus 364 ~~~~~h~~~I~~l~~sp~~~~l~s~s~D----g~I~iwd~~~~~~~~~~~-~~~~~~v~~v~~sp~~~~l~s~s~----- 433 (531)
.....+...+.++++++++++++++..+ +.|.+||..+......+. ......+..++++|+++++++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN 159 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccC
Confidence 6554567789999999999988887766 689999998776543332 123456889999999987776553
Q ss_pred -CCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEE-EeCCCcEEEEECCC-CeEEEE--------eeccC
Q 009597 434 -DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS-GDGEGKCWFWDWKS-CKVFRT--------LKCHE 502 (531)
Q Consensus 434 -Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s-gs~dg~I~iwd~~~-~~~~~~--------~~~h~ 502 (531)
.+.|..++..++... . +... ...+..++|+|+|++|+. .+.++.|++||+.+ +..+.. +.++
T Consensus 160 ~~~~l~~~~~~~~~~~-~---~~~~--~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~- 232 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTVT-P---IIQN--ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH- 232 (333)
T ss_dssp CCEEEEEECTTSCCEE-E---EEEE--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-
T ss_pred CCceEEEEeCCCCEEE-E---eecC--CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-
Confidence 356666665543221 1 1111 123667999999986654 45678999999863 332211 1222
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 503 GVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 503 ~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
..+..+++++ ++.++++...++.|.+||
T Consensus 233 ~~~~~i~~d~-~G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 233 EGPDSCCIDS-DDNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp SEEEEEEEBT-TCCEEEEEETTTEEEEEC
T ss_pred CCCCceEECC-CCCEEEEEcCCCEEEEEC
Confidence 3678899999 677777777788899986
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.46 E-value=2.1e-10 Score=116.60 Aligned_cols=253 Identities=9% Similarity=-0.037 Sum_probs=173.2
Q ss_pred eeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEe----------cCCeEEEEeCCCCcEEEEccCC--------C
Q 009597 265 HVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTAS----------YDKNIKYWDTETGQVIRTFSTG--------K 326 (531)
Q Consensus 265 ~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s----------~Dg~I~vWd~~t~~~i~~~~~~--------~ 326 (531)
.+.+++..+++.+.++.....+ .++|+|||++|+.+. .++.|.+||..+++.+..+... .
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 6788888889988888765555 999999999988875 3678999999999988887654 2
Q ss_pred cceEEEEccCCCCCcEEEEee-C-CCeEEEEECCCCceeEE-EcccCCCeeEEEEecCC-CEEEEEeCCCCEEEEEcCCC
Q 009597 327 IPYVVKLNPDDDKQNILLAGM-S-DKKIVQWDMNTKEITQE-YDQHLGAVNTITFVDSN-RRFVTSSDDKSLRVWEFGIP 402 (531)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~sg~-~-dg~I~iwd~~t~~~~~~-~~~h~~~I~~l~~sp~~-~~l~s~s~Dg~I~iwd~~~~ 402 (531)
.+..+.++++. +.|+++. . ++.|.++| .+++.+.. +... + |+.+.|.+ +.+++.+.||.+.++|. ++
T Consensus 126 ~p~~~~~spDG---~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 126 YSWMNANTPNN---ADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred CccceEECCCC---CEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence 34556666643 3455554 3 58899999 99998877 6432 1 34555654 56777888999999999 77
Q ss_pred eEEEEeeC----CCCCC-ccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeec---C-----CccccceEEEEEc
Q 009597 403 VVIKYISE----PHMHS-MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA---G-----HIVAGYACQVNFS 469 (531)
Q Consensus 403 ~~~~~~~~----~~~~~-v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~---~-----~~~~~~v~~l~~s 469 (531)
........ ....+ .....+.+++..++..+..+.+.+.|+...... ....+. . .........+.++
T Consensus 197 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~-v~~~~~~~~~~~~~~~~~p~g~~~~~~s 275 (373)
T 2mad_H 197 GAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT-NKAPIDALSGGRKADTWRPGGWQQVAYL 275 (373)
T ss_pred cEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce-EeeeeeecCCcccccceecCceEeEEEC
Confidence 66533220 11111 123455666555555557889999998654211 111111 0 0001123337899
Q ss_pred CCCCEEEEEeC----------CCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCC-EEEEEe-CCCCEEeeC
Q 009597 470 PDGRFVMSGDG----------EGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS-KVATCG-WDGLIKYWD 531 (531)
Q Consensus 470 pdg~~l~sgs~----------dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~-~l~t~s-~Dg~I~iWD 531 (531)
|+++.|++... .+.|.++|..+++.+.++.... ...+++|+| +++ +++++. .++.|.+||
T Consensus 276 ~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~-Dg~~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 276 KSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQ-DGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred CCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECC-CCCeEEEEEcCCCCeEEEEE
Confidence 99998887653 3579999999999999997433 468999999 555 777777 489999987
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.45 E-value=6.6e-11 Score=126.74 Aligned_cols=229 Identities=14% Similarity=0.052 Sum_probs=167.1
Q ss_pred cCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECC--CCceeEEEcccCC
Q 009597 294 NDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN--TKEITQEYDQHLG 371 (531)
Q Consensus 294 pdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~--t~~~~~~~~~h~~ 371 (531)
+.+.++++...+++|.++|..+++.+.++..+..+..+.++++. +++++++.++.|.+||+. +++.+.++....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDG---r~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~- 240 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASG---RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS- 240 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS---CEEEEEETTSEEEEEETTSSSCCEEEEEECCS-
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCC---CEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-
Confidence 44556778888999999999999999999888877777777744 567788899999999996 888888887644
Q ss_pred CeeEEEEe----cCCCEEEEEeC-CCCEEEEEcCCCeEEEEeeCCC----------CCCccEEEEeCCCCEEEE-EEcCC
Q 009597 372 AVNTITFV----DSNRRFVTSSD-DKSLRVWEFGIPVVIKYISEPH----------MHSMPSISLHPNTNWLAA-QSLDN 435 (531)
Q Consensus 372 ~I~~l~~s----p~~~~l~s~s~-Dg~I~iwd~~~~~~~~~~~~~~----------~~~v~~v~~sp~~~~l~s-~s~Dg 435 (531)
....++|+ |+|+++++++. +++|.|+|..+.+.+..+.... ...+..+..++++..++. ...+|
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 35789999 69998877665 5899999999998888775321 125667888887655544 44568
Q ss_pred eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeec-----cCCcEEEEE
Q 009597 436 QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCKVFRTLKC-----HEGVCIGCE 509 (531)
Q Consensus 436 ~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~~~~~~~~-----h~~~V~~v~ 509 (531)
.|.++|......+.. ..+. .......+.|+|+|++|+++. .++.|.++|..+++++..+.. |.+.-.. .
T Consensus 321 ~v~~vd~~~~~~~~v-~~i~---~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~-~ 395 (567)
T 1qks_A 321 KILLVDYTDLNNLKT-TEIS---AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN-F 395 (567)
T ss_dssp EEEEEETTCSSEEEE-EEEE---CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-E
T ss_pred eEEEEecCCCcccee-eeee---ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-e
Confidence 999999876533221 1111 123455689999999987765 678999999999998877764 4332222 2
Q ss_pred EecCCCCEEEEEe-CCCCEEeeC
Q 009597 510 WHPLEQSKVATCG-WDGLIKYWD 531 (531)
Q Consensus 510 ~~p~~~~~l~t~s-~Dg~I~iWD 531 (531)
++|..+.+++++. .++.|.++|
T Consensus 396 ~~p~~g~v~~t~~~g~~~Vsvid 418 (567)
T 1qks_A 396 VHPTFGPVWATSHMGDDSVALIG 418 (567)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEE
T ss_pred ECCCCCcEEEeCCCCCCeEEEec
Confidence 5774455555554 467888875
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.44 E-value=1.2e-10 Score=120.05 Aligned_cols=235 Identities=10% Similarity=0.063 Sum_probs=163.9
Q ss_pred CceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCC--eEEEEECCCCce
Q 009597 285 KAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK--KIVQWDMNTKEI 362 (531)
Q Consensus 285 ~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg--~I~iwd~~t~~~ 362 (531)
.....|+|+++++++++...++.|++||..++...........+. +.+.+.. ..|+++..++ .|.+|+...+..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g---~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDK---QRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTS---SEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCC---CcEEEEecCCCceEEEEEcCCCce
Confidence 468899999999977777778999999999888776665555555 6666543 4566666655 899999876655
Q ss_pred eEEE----cccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEe---eCCCCCCc--cEEEEeCC-CCEEEEEE
Q 009597 363 TQEY----DQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYI---SEPHMHSM--PSISLHPN-TNWLAAQS 432 (531)
Q Consensus 363 ~~~~----~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~---~~~~~~~v--~~v~~sp~-~~~l~s~s 432 (531)
...+ ......+.+++++|++..|+.+..++.|+.||...+...... .......- ..++|+|+ +.++++-.
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 4444 224567889999996556666777889999999877543221 11122222 39999995 55566656
Q ss_pred cCCeEEEEEcCCcceeceeeeecCCc-------------cccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEe
Q 009597 433 LDNQILIYSTRERFQLNKKKRFAGHI-------------VAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCKVFRTL 498 (531)
Q Consensus 433 ~Dg~I~iwd~~~~~~~~~~~~~~~~~-------------~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~~~~~~ 498 (531)
.++.|+.|+...... .+.++. .-.....++++++|+++++-. .++.|+.|++.++.. .++
T Consensus 287 ~~~~I~~~~~~g~~~-----~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~ 360 (409)
T 3hrp_A 287 NLSSVYKITPDGECE-----WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STV 360 (409)
T ss_dssp TTTEEEEECTTCCEE-----EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEE
T ss_pred CCCEEEEEecCCCEE-----EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEE
Confidence 678999998765311 111110 012367799999999888877 889999999888874 344
Q ss_pred ecc---------------CCcEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 499 KCH---------------EGVCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 499 ~~h---------------~~~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
.++ -.....+++++ ++.++++-..++.|+.+
T Consensus 361 ~g~~~~~g~~~g~~~~~~~~~P~giavd~-~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 361 AGQVDVASQIDGTPLEATFNYPYDICYDG-EGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp EECTTCBSCCCBSTTTCCBSSEEEEEECS-SSEEEEEESTTCEEEEE
T ss_pred eCCCCCCCcCCCChhceEeCCceEEEEcC-CCCEEEEECCCCeEEEE
Confidence 433 23578999999 57777777778888765
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.44 E-value=3e-11 Score=118.30 Aligned_cols=228 Identities=10% Similarity=0.062 Sum_probs=157.2
Q ss_pred HHhhhhc-cCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC--
Q 009597 249 AKKKEEK-GNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-- 325 (531)
Q Consensus 249 ~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-- 325 (531)
.+.+++. +...+..++.|..|+...+ ...+..+...+.+++++++|+++++...++.|.+||..+++........
T Consensus 34 ~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~ 111 (296)
T 3e5z_A 34 VYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEG 111 (296)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETT
T ss_pred eEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCC
Confidence 3445555 4555566677888887766 6777778889999999999997777766789999999888765443211
Q ss_pred ---CcceEEEEccCCCCCcEEEE----ee-------------CCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEE
Q 009597 326 ---KIPYVVKLNPDDDKQNILLA----GM-------------SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRF 385 (531)
Q Consensus 326 ---~~~~~~~~~~~~~~~~~l~s----g~-------------~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l 385 (531)
..+..+.+.+ .++++++ |+ ..+.|..++.. ++ +..+..+....+.++|+|+++.+
T Consensus 112 ~~~~~~~~i~~d~---~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 112 KKLNSPNDVCLAP---DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLL 186 (296)
T ss_dssp EECCCCCCEEECT---TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEE
T ss_pred CCCCCCCCEEECC---CCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEE
Confidence 1223345544 3456666 33 13466666655 44 44455566778999999999999
Q ss_pred EEEeCCCCEEEEEcC-CCeE---EEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCcccc
Q 009597 386 VTSSDDKSLRVWEFG-IPVV---IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 461 (531)
Q Consensus 386 ~s~s~Dg~I~iwd~~-~~~~---~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 461 (531)
++.+.++.|.+|++. .+.. ...+ ..+...+.+++++++|+++++. ++.|.+|+.. +..+ ..+..+. .
T Consensus 187 v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~---~~~~~~~--~ 257 (296)
T 3e5z_A 187 VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDEL---GRVLTPQ--T 257 (296)
T ss_dssp EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEE---EEEECSS--C
T ss_pred EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEE---EEEECCC--C
Confidence 777778999999986 4433 2333 3355667889999999876665 8899999986 3333 2233332 2
Q ss_pred ceEEEEE-cCCCCEEEEEeCCCcEEEEECCCCeE
Q 009597 462 YACQVNF-SPDGRFVMSGDGEGKCWFWDWKSCKV 494 (531)
Q Consensus 462 ~v~~l~~-spdg~~l~sgs~dg~I~iwd~~~~~~ 494 (531)
+.+++| +|+++.|++++.+ .+..++..+.++
T Consensus 258 -~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 258 -TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp -CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred -ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 666888 6899999888876 466667766553
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.42 E-value=6.6e-10 Score=108.00 Aligned_cols=238 Identities=11% Similarity=-0.015 Sum_probs=162.9
Q ss_pred cCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEE-ccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECC
Q 009597 281 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRT-FSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN 358 (531)
Q Consensus 281 ~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~-~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~ 358 (531)
......+.+|++.++|+++++...++.|.+||.. ++.... +... ..+..+.+.+ .+.++++...++.|..||..
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~---~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSS---LGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT---TSCEEEEETTTTEEEEECTT
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECC---CCCEEEEecCCCeEEEECCC
Confidence 3456789999999999977777678999999988 655432 2111 2333444432 34567766668899999988
Q ss_pred CCceeE-EEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeE
Q 009597 359 TKEITQ-EYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQI 437 (531)
Q Consensus 359 t~~~~~-~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I 437 (531)
++... .+......+.++++.++++++++...++.|..||.. +.............+.++++.++++++++...++.|
T Consensus 92 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 92 -GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp -SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred -CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 55432 222234678999999999988887778889999987 544433222244568899999999966666567899
Q ss_pred EEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE-eeccCCcEEEEEEecCCCC
Q 009597 438 LIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRT-LKCHEGVCIGCEWHPLEQS 516 (531)
Q Consensus 438 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~-~~~h~~~V~~v~~~p~~~~ 516 (531)
.+|+. ++... .. ..... ...+..++++++|.+.++....+.|.+||. +++.... +..+...+.++++.+ ++.
T Consensus 170 ~~~~~-~g~~~-~~-~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~-~g~ 242 (300)
T 2qc5_A 170 GRITN-TGKLE-EY-PLPTN--AAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGK-NSE 242 (300)
T ss_dssp EEECT-TCCEE-EE-ECSST--TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECS-TTC
T ss_pred EEECC-CCcEE-Ee-eCCCC--CCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECC-CCC
Confidence 99998 43222 11 11111 245778999999988877777788999998 5554332 333455688999998 566
Q ss_pred EEEEEeCCCCEEeeC
Q 009597 517 KVATCGWDGLIKYWD 531 (531)
Q Consensus 517 ~l~t~s~Dg~I~iWD 531 (531)
+.++...++.|..||
T Consensus 243 l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 243 IWFTEWGANQIGRIT 257 (300)
T ss_dssp EEEEETTTTEEEEEC
T ss_pred EEEeccCCCeEEEEC
Confidence 666665667888775
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.41 E-value=9e-11 Score=118.66 Aligned_cols=259 Identities=14% Similarity=0.030 Sum_probs=176.7
Q ss_pred CceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEe----------cCCeEEEEeCCCCcEEEEccCC-------
Q 009597 263 GEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTAS----------YDKNIKYWDTETGQVIRTFSTG------- 325 (531)
Q Consensus 263 ~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s----------~Dg~I~vWd~~t~~~i~~~~~~------- 325 (531)
++.+.+.+..+++.+.++..-..+ . ++++|||++|+++. .++.|.+||..+++.+.++..+
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 457888888899999999866666 4 99999999887775 3678999999999999988643
Q ss_pred -CcceEEEEccCCCCCcEEEEee--CCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCC-
Q 009597 326 -KIPYVVKLNPDDDKQNILLAGM--SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI- 401 (531)
Q Consensus 326 -~~~~~~~~~~~~~~~~~l~sg~--~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~- 401 (531)
..+..+.+.+++ ..++++. .++.|.++|+.+++.+.++.... + ...+....+.|++.+.||++.+.++..
T Consensus 136 g~~P~~~a~spDG---k~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~ 209 (386)
T 3sjl_D 136 GTYPWMTSLTPDG---KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTE 209 (386)
T ss_dssp SCCGGGEEECTTS---SEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSS
T ss_pred CCCCceEEEcCCC---CEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCC
Confidence 256667777754 3455444 37899999999999999885432 1 223333567788889999999999976
Q ss_pred CeEEEEee---CCCCCCcc-EEEEe-CCCCEEEEEEcCCeEEEEEcCCcce--eceeeeec-----CCccccceEEEEEc
Q 009597 402 PVVIKYIS---EPHMHSMP-SISLH-PNTNWLAAQSLDNQILIYSTRERFQ--LNKKKRFA-----GHIVAGYACQVNFS 469 (531)
Q Consensus 402 ~~~~~~~~---~~~~~~v~-~v~~s-p~~~~l~s~s~Dg~I~iwd~~~~~~--~~~~~~~~-----~~~~~~~v~~l~~s 469 (531)
++...... ......+. ...|. ++|++++ .+.+|.|.++|+.+... +..+..+. .....+....++++
T Consensus 210 g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~ 288 (386)
T 3sjl_D 210 GTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYH 288 (386)
T ss_dssp SCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEE
T ss_pred CeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeEC
Confidence 44332111 11112222 24564 5675544 56689999999976531 21111010 00011122237789
Q ss_pred CCCCEEEEEeC----------CCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEE-EeCCCCEEeeC
Q 009597 470 PDGRFVMSGDG----------EGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT-CGWDGLIKYWD 531 (531)
Q Consensus 470 pdg~~l~sgs~----------dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t-~s~Dg~I~iWD 531 (531)
++++.|+.... ...|.+.|..+++.+..+..- ..+.+|++++++..+|++ ...++.|.++|
T Consensus 289 ~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD 360 (386)
T 3sjl_D 289 RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHD 360 (386)
T ss_dssp TTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEE
T ss_pred CCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 99998888643 247999999999999998743 257899999955435555 45589999886
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=6.1e-11 Score=131.75 Aligned_cols=239 Identities=11% Similarity=0.054 Sum_probs=151.5
Q ss_pred CccCceEEEEEccCCCEEEEEecC-----CeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCC------
Q 009597 282 GHSKAVRDISFCNDGTKFLTASYD-----KNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK------ 350 (531)
Q Consensus 282 gH~~~V~~l~fspdg~~l~s~s~D-----g~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg------ 350 (531)
+|...+..++|||||++|+.++.+ ..|++||+.+++.+...........+.|+++ ..|+.+..++
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD----~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN----DALLYSRFAEPKEGQA 235 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT----SEEEEEECCCC-----
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC----CEEEEEEecCcccccc
Confidence 344578999999999999877654 4699999999987654211111123444443 3455444443
Q ss_pred --------eEEEEECCCCce--eEEEc--ccCCCeeEEEEecCCCEEEEEeCCC-----CEEEEEcCCCeE--EEEeeCC
Q 009597 351 --------KIVQWDMNTKEI--TQEYD--QHLGAVNTITFVDSNRRFVTSSDDK-----SLRVWEFGIPVV--IKYISEP 411 (531)
Q Consensus 351 --------~I~iwd~~t~~~--~~~~~--~h~~~I~~l~~sp~~~~l~s~s~Dg-----~I~iwd~~~~~~--~~~~~~~ 411 (531)
.|++|++.++.. ...+. .+...+..+.|+|+|++|+..+.++ .|++||+.++.. ...+..
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~- 314 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP- 314 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC-
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC-
Confidence 499999987752 23333 2334588999999999988877544 799999987621 334433
Q ss_pred CCCCccEEEEeCCCCEEEEEEcC----CeEEEEEcCCcc-eeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEE
Q 009597 412 HMHSMPSISLHPNTNWLAAQSLD----NQILIYSTRERF-QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF 486 (531)
Q Consensus 412 ~~~~v~~v~~sp~~~~l~s~s~D----g~I~iwd~~~~~-~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~i 486 (531)
+...+... ++|++..|+..+.+ +.|.+||+.+.. ... ..+..+ ...+..+.++ ++.++++...++..+|
T Consensus 315 ~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~--~l~~~~--~~~l~~~~~~-~~~lv~~~~~dg~~~l 388 (741)
T 1yr2_A 315 DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFD--TVVPES--KDNLESVGIA-GNRLFASYIHDAKSQV 388 (741)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEE--EEECCC--SSEEEEEEEE-BTEEEEEEEETTEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccE--EEecCC--CCeEEEEEEE-CCEEEEEEEECCEEEE
Confidence 33333343 35889988888764 459999987642 111 112222 2235567777 5667788888888776
Q ss_pred EECC-CCeEEEEeec-cCCcEEEEEEecCCCCEEEEEeC---CCCEEeeC
Q 009597 487 WDWK-SCKVFRTLKC-HEGVCIGCEWHPLEQSKVATCGW---DGLIKYWD 531 (531)
Q Consensus 487 wd~~-~~~~~~~~~~-h~~~V~~v~~~p~~~~~l~t~s~---Dg~I~iWD 531 (531)
|.+. +++....+.. +.+.+..+.++|++..++++.+. .+.|++||
T Consensus 389 ~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 438 (741)
T 1yr2_A 389 LAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALD 438 (741)
T ss_dssp EEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEE
T ss_pred EEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 6543 4566666664 36678899999954445544443 46677775
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.39 E-value=3.1e-11 Score=116.05 Aligned_cols=230 Identities=10% Similarity=0.024 Sum_probs=153.3
Q ss_pred hhccCC-CCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC--Ccce
Q 009597 253 EEKGNA-GGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG--KIPY 329 (531)
Q Consensus 253 ~~~~~~-~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~--~~~~ 329 (531)
++.+.. +...++.|..++............+...+.+|+++++|+++++.. ++.|.+||....... .+... ..+.
T Consensus 34 ~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~ 111 (270)
T 1rwi_B 34 AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPE 111 (270)
T ss_dssp TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEE
T ss_pred CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCc
Confidence 334444 334455666666544333222234446789999999998666655 889999998765443 33222 3344
Q ss_pred EEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEee
Q 009597 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYIS 409 (531)
Q Consensus 330 ~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~ 409 (531)
.+.+.+ .++++++...++.|.+|+..+.............+.+|++.++++++++...++.|.+||..........
T Consensus 112 ~i~~~~---~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~- 187 (270)
T 1rwi_B 112 GLAVDT---QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP- 187 (270)
T ss_dssp EEEECT---TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC-
T ss_pred ceEECC---CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec-
Confidence 555554 3357777777899999987655443333333456789999999998887777889999998876544332
Q ss_pred CCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 009597 410 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 489 (531)
Q Consensus 410 ~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~ 489 (531)
......+.+++++++|.++++...++.|.+|+........ ....+ ...+..++++++|+++++...++.|+++++
T Consensus 188 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~---~~~~~--~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 188 FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV---LPFTG--LNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE---CCCCS--CSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee---eccCC--CCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 2233668899999999777777778899999986643221 11111 134778999999998888889999999998
Q ss_pred CCCe
Q 009597 490 KSCK 493 (531)
Q Consensus 490 ~~~~ 493 (531)
...+
T Consensus 263 ~~~~ 266 (270)
T 1rwi_B 263 LEHH 266 (270)
T ss_dssp CGGG
T ss_pred CCcc
Confidence 7544
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.37 E-value=9.2e-10 Score=106.96 Aligned_cols=261 Identities=11% Similarity=0.029 Sum_probs=168.0
Q ss_pred hccCCCCCCCceeeeeecccCeeeE-EecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEE-cc-CCCcceE
Q 009597 254 EKGNAGGEKGEHVEDKSTFHGKCMR-TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRT-FS-TGKIPYV 330 (531)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~~~~~-~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~-~~-~~~~~~~ 330 (531)
+.+..+...++.+..++.. ++... .+..+...+.+|++.++|+++++...++.|.+||.. ++.... +. ....+..
T Consensus 31 g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~ 108 (300)
T 2qc5_A 31 GKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYG 108 (300)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEE
T ss_pred CCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCcc
Confidence 3333333344556666655 44332 233445689999999999877777667899999987 655322 21 1233444
Q ss_pred EEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEE-EcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEee
Q 009597 331 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE-YDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYIS 409 (531)
Q Consensus 331 ~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~-~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~ 409 (531)
+.+.+ .+.++++...++.|..||.. ++.... +......+.++++.++++.+++...++.|.+||. .+.......
T Consensus 109 i~~~~---~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~ 183 (300)
T 2qc5_A 109 ITEGL---NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPL 183 (300)
T ss_dssp EEECS---TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC
T ss_pred ceECC---CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeC
Confidence 44443 34677777778899999987 554432 2334567899999999997777766788999998 444443322
Q ss_pred CCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 009597 410 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 489 (531)
Q Consensus 410 ~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~ 489 (531)
......+..+++++++.++++....+.|.+|+.. +.... . ..... ...+.+++++++|++.++...++.|..||.
T Consensus 184 ~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~-~-~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 184 PTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GEISE-Y-DIPTP--NARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp SSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEEE-E-ECSST--TCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC-CcEEE-E-ECCCC--CCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 2234567899999999877766667789999983 32211 1 11111 244778999999997777767789999998
Q ss_pred CCCeEEE-EeeccCCcEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 490 KSCKVFR-TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 490 ~~~~~~~-~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
+++... .+......+.++++.+ ++.++++.. . .|..+
T Consensus 259 -~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~-~-~i~~~ 296 (300)
T 2qc5_A 259 -DNTIQEYQLQTENAEPHGITFGK-DGSVWFALK-C-KIGKL 296 (300)
T ss_dssp -TSCEEEEECCSTTCCCCCEEECT-TSCEEEECS-S-EEEEE
T ss_pred -CCcEEEEECCccCCccceeEeCC-CCCEEEEcc-C-ceEEe
Confidence 454332 2233345678899998 566555444 4 55544
No 203
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.34 E-value=2.3e-09 Score=106.80 Aligned_cols=227 Identities=12% Similarity=0.028 Sum_probs=147.8
Q ss_pred CceEEEEEccC-CCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCcee
Q 009597 285 KAVRDISFCND-GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT 363 (531)
Q Consensus 285 ~~V~~l~fspd-g~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~ 363 (531)
.-..+..|+|+ +.++++...++.|.+||..+++.. .+.....+..+.+.++ +.+++ ++.+ .|.+||..+++..
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~d---g~l~v-~~~~-gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISD---SKQLI-ASDD-GLFLRDTATGVLT 122 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEET---TEEEE-EETT-EEEEEETTTCCEE
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCC---CeEEE-EECC-CEEEEECCCCcEE
Confidence 34577899997 455667777899999999887653 3333444555555543 34444 4444 4999999888754
Q ss_pred EEEcc----cCCCeeEEEEecCCCEEEEEeC------CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-
Q 009597 364 QEYDQ----HLGAVNTITFVDSNRRFVTSSD------DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS- 432 (531)
Q Consensus 364 ~~~~~----h~~~I~~l~~sp~~~~l~s~s~------Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s- 432 (531)
..... ....++++.++|+|+++++... .+.|..++ .+....... .......++|+|+++.|+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEEET
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEEEC
Confidence 43321 1235889999999997776543 23455555 444332221 233467899999998776554
Q ss_pred cCCeEEEEEcC--Cc-ceec--eeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEE
Q 009597 433 LDNQILIYSTR--ER-FQLN--KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507 (531)
Q Consensus 433 ~Dg~I~iwd~~--~~-~~~~--~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~ 507 (531)
.++.|.+|++. ++ .... .+..+... ...+..++++++|.+.++...++.|.+||. +++.+..+..+...+.+
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~--~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~ 275 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGI--KGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTC 275 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTS--SSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEE
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCC--CCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEE
Confidence 46899999985 44 2111 11112111 234567999999998877777789999998 67778888777778999
Q ss_pred EEEe-cCCCCEEEEEeCC
Q 009597 508 CEWH-PLEQSKVATCGWD 524 (531)
Q Consensus 508 v~~~-p~~~~~l~t~s~D 524 (531)
++|. ++.+.++++...+
T Consensus 276 ~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 276 PAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEESTTSCEEEEEEBCT
T ss_pred EEEecCCCCEEEEEecCC
Confidence 9998 7434444555444
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.34 E-value=3.2e-10 Score=111.71 Aligned_cols=238 Identities=11% Similarity=0.153 Sum_probs=153.3
Q ss_pred eEEecCccCceEEEEEccCCC-EEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEE
Q 009597 277 MRTYMGHSKAVRDISFCNDGT-KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 355 (531)
Q Consensus 277 ~~~l~gH~~~V~~l~fspdg~-~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iw 355 (531)
+..+..+.....+..|+++|+ ++++...++.|..|+. +++..........+..+.+.+ .++++++...++.|.+|
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~---dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDA---QQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECT---TSCEEEEETTTTEEEEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECC---CCCEEEEECCCCEEEEE
Confidence 344444556778999999998 5677777899999998 454322222333344455544 33566665666899999
Q ss_pred ECCCCceeEEEcc----cCCCeeEEEEecCCCEEEE----EeC-------------CCCEEEEEcCCCeEEEEeeCCCCC
Q 009597 356 DMNTKEITQEYDQ----HLGAVNTITFVDSNRRFVT----SSD-------------DKSLRVWEFGIPVVIKYISEPHMH 414 (531)
Q Consensus 356 d~~t~~~~~~~~~----h~~~I~~l~~sp~~~~l~s----~s~-------------Dg~I~iwd~~~~~~~~~~~~~~~~ 414 (531)
+.. ++....... ....++.+++.++|+++++ +.. .+.|..||..++...... ...
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~ 188 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLD 188 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EES
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCC
Confidence 986 553322211 1235778999999998886 332 245777777555433322 234
Q ss_pred CccEEEEeCCCCEEEEEEcC------CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 009597 415 SMPSISLHPNTNWLAAQSLD------NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488 (531)
Q Consensus 415 ~v~~v~~sp~~~~l~s~s~D------g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd 488 (531)
....++|+|+++.|+++... +.|.+|++.... +.....+... ..+....++++++|++. +++.+ .|.+|+
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~-~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~ 264 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV-PDGLPDGFCVDRGGWLW-SSSGT-GVCVFD 264 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC-SSSCCCSEEECTTSCEE-ECCSS-EEEEEC
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC-CCCCCCeEEECCCCCEE-EecCC-cEEEEC
Confidence 56789999999988887765 789999987543 2222222111 12334458899999954 44444 499999
Q ss_pred CCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEe
Q 009597 489 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 529 (531)
Q Consensus 489 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~i 529 (531)
. .++.+..+..+. .+.+++|.| ++..|+.++.++..++
T Consensus 265 ~-~g~~~~~~~~~~-~~~~~~f~~-d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 265 S-DGQLLGHIPTPG-TASNCTFDQ-AQQRLFITGGPCLWML 302 (305)
T ss_dssp T-TSCEEEEEECSS-CCCEEEECT-TSCEEEEEETTEEEEE
T ss_pred C-CCCEEEEEECCC-ceeEEEEeC-CCCEEEEEcCCeEEEE
Confidence 7 677777777655 478999997 6666776666665554
No 205
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.34 E-value=3.5e-10 Score=116.21 Aligned_cols=257 Identities=11% Similarity=0.014 Sum_probs=177.8
Q ss_pred ceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEe----------cCCeEEEEeCCCCcEEEEccCC--------
Q 009597 264 EHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTAS----------YDKNIKYWDTETGQVIRTFSTG-------- 325 (531)
Q Consensus 264 ~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s----------~Dg~I~vWd~~t~~~i~~~~~~-------- 325 (531)
+.+.+.+..+++.+.++.--..+ .+.++|||++|+.+. .++.|.++|..+++.+.++..+
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 67889999999999999766666 899999999888776 3678999999999999888653
Q ss_pred CcceEEEEccCCCCCcEEEEee-C-CCeEEEEECCCCceeEEEcccCCCeeEEEEecC-CCEEEEEeCCCCEEEEEcCCC
Q 009597 326 KIPYVVKLNPDDDKQNILLAGM-S-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS-NRRFVTSSDDKSLRVWEFGIP 402 (531)
Q Consensus 326 ~~~~~~~~~~~~~~~~~l~sg~-~-dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~-~~~l~s~s~Dg~I~iwd~~~~ 402 (531)
..+..+.++++. ..++++. . ++.|.+.|+.+++.+..+.... +....|+ .+.+++.+.||.+.+.++..+
T Consensus 177 ~~P~~~~~spDG---k~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~ 249 (426)
T 3c75_H 177 TYQWMNALTPDN---KNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYMNCRDGSLARVDFADG 249 (426)
T ss_dssp CCGGGSEECTTS---SEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEEETTSSEEEEECCTT
T ss_pred CCcceEEEcCCC---CEEEEEecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEEEcCCCCEEEEECCCC
Confidence 345556666644 3455554 3 6899999999999998886432 1233443 366777888888888888655
Q ss_pred eEEEEe---eCCCCCC-ccEEEEeCCCCEEEEEEcCCeEEEEEcCCccee--ceeeeecCC-----ccccceEEEEEcCC
Q 009597 403 VVIKYI---SEPHMHS-MPSISLHPNTNWLAAQSLDNQILIYSTRERFQL--NKKKRFAGH-----IVAGYACQVNFSPD 471 (531)
Q Consensus 403 ~~~~~~---~~~~~~~-v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~--~~~~~~~~~-----~~~~~v~~l~~spd 471 (531)
+..... ......+ ...+.+.+++..++..+..+.|.+.|+...... ......... ........++++|+
T Consensus 250 ~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~d 329 (426)
T 3c75_H 250 ETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQ 329 (426)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGG
T ss_pred cEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCC
Confidence 444221 1111112 234567888888888888899999998654211 111100000 00111112689999
Q ss_pred CCEEEEEeC----------CCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCC-EEEEEe-CCCCEEeeC
Q 009597 472 GRFVMSGDG----------EGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS-KVATCG-WDGLIKYWD 531 (531)
Q Consensus 472 g~~l~sgs~----------dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~-~l~t~s-~Dg~I~iWD 531 (531)
+..|++... .+.|.++|..+.+.+.++.... ...+++|+| +++ +++++. .++.|.++|
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~sp-Dg~~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQ-DAEPLLYALSAGTQTLHIYD 399 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECC-SSSCEEEEEETTTTEEEEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEcc-CCCEEEEEEcCCCCeEEEEE
Confidence 988777642 3579999999999999997433 468999999 555 777776 589999887
No 206
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.30 E-value=4.4e-10 Score=124.19 Aligned_cols=173 Identities=8% Similarity=-0.004 Sum_probs=121.5
Q ss_pred eEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCC----------------EEEEEcCCCeE--EEEee-CC
Q 009597 351 KIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS----------------LRVWEFGIPVV--IKYIS-EP 411 (531)
Q Consensus 351 ~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~----------------I~iwd~~~~~~--~~~~~-~~ 411 (531)
.|++||+.+++.+.....+ ..+..++|+|+|+.|+.++.++. |++|++.++.. ..... ..
T Consensus 152 ~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~ 230 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD 230 (710)
T ss_dssp EEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC
Confidence 8999999999877643323 23678999999999999988876 99999988752 12222 22
Q ss_pred CCCCccEEEEeCCCCEEEEEEc-----CCeEEEEEcCC------cceeceeeeecCCccccceEEEEEcCCCCEEEEEeC
Q 009597 412 HMHSMPSISLHPNTNWLAAQSL-----DNQILIYSTRE------RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 480 (531)
Q Consensus 412 ~~~~v~~v~~sp~~~~l~s~s~-----Dg~I~iwd~~~------~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~ 480 (531)
+...+..+.|+|+|++|+..+. +..|.+||+.+ +.. ....+..+... +. ..|+++|..|+..+.
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~--~~~~l~~~~~~--~~-~~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL--KWVKLIDNFEG--EY-DYVTNEGTVFTFKTN 305 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC--CCEEEECSSSS--CE-EEEEEETTEEEEEEC
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc--ceEEeeCCCCc--EE-EEEeccCCEEEEEEC
Confidence 3445778999999999998876 67899999876 321 12223333221 22 358899988776654
Q ss_pred C----CcEEEEECCCCe--EEEEeeccCC--cEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 481 E----GKCWFWDWKSCK--VFRTLKCHEG--VCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 481 d----g~I~iwd~~~~~--~~~~~~~h~~--~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
. +.|++||+.++. ....+..|.. .+..++|++ ++.++++...|+..+||
T Consensus 306 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 306 RHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp TTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEET-TTEEEEEEEETTEEEEE
T ss_pred CCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEc-CCEEEEEEEECCEEEEE
Confidence 3 369999998764 2345555544 678899997 77788888889865554
No 207
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.28 E-value=3.9e-11 Score=121.70 Aligned_cols=173 Identities=12% Similarity=0.086 Sum_probs=129.5
Q ss_pred ceEEEEEccCCCEEEEEecCCeEEEEeCCCCc-----------EEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEE
Q 009597 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQ-----------VIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 354 (531)
Q Consensus 286 ~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~i 354 (531)
.+..|++++...+|++|+.+ .+++|+++... ....+.... +..+.| ++.+|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f-----d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF-----HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE-----ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE-----CCCEEEEE-cCCcEEE
Confidence 69999999999999999987 56679865332 112233333 555555 23577777 8899999
Q ss_pred EECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcC
Q 009597 355 WDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD 434 (531)
Q Consensus 355 wd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~D 434 (531)
||+++.........|...+.++.+.+. .+++++.||.|.+||+..+.... +...|+|++|+|+| ++.|..|
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE--EEEEETT
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc--eEEEEcC
Confidence 999887766677778888988887754 38899999999999999876643 34579999999999 7889999
Q ss_pred CeEEEEEcCCcceeceeeee------c---CCccccceEEEEEcCCCCEEEEE
Q 009597 435 NQILIYSTRERFQLNKKKRF------A---GHIVAGYACQVNFSPDGRFVMSG 478 (531)
Q Consensus 435 g~I~iwd~~~~~~~~~~~~~------~---~~~~~~~v~~l~~spdg~~l~sg 478 (531)
|+|++|+...... .....+ . +| ...|.+|.|.+++.++++-
T Consensus 182 g~i~~~~~~~~~~-~~k~~I~~Pp~~~~~~~~--~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 182 RSFQSFAWRNGEM-EKQFEFSLPSELEELPVE--EYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp SCEEEEEEETTEE-EEEEEECCCHHHHTSCTT--TSEEEEEEESSSSEEEEEE
T ss_pred CcEEEEcCCCccc-cccceecCCcccccccCC--CeeEEEEEEecCCeEEEEE
Confidence 9999998876542 001112 1 23 3568999999999999873
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.25 E-value=9e-09 Score=104.54 Aligned_cols=224 Identities=6% Similarity=-0.046 Sum_probs=153.6
Q ss_pred CCceeeeeecccCeeeEEecCc-------cCceEEEEEccCCCEEEEEec--CCeEEEEeCCCCcEEEE-ccCCCcceEE
Q 009597 262 KGEHVEDKSTFHGKCMRTYMGH-------SKAVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRT-FSTGKIPYVV 331 (531)
Q Consensus 262 ~~~~i~~~~~~~~~~~~~l~gH-------~~~V~~l~fspdg~~l~s~s~--Dg~I~vWd~~t~~~i~~-~~~~~~~~~~ 331 (531)
.++.+.+++..+.+.+.++.-- ...-..+.|+|||++|+.+.. ++.|.++| .+++.+.. +..... +
T Consensus 95 ~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~ 170 (373)
T 2mad_H 95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---Y 170 (373)
T ss_pred CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---E
Confidence 4566778887777777665421 123568999999999998874 57899999 99999888 755432 3
Q ss_pred EEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEc-----ccCCCe-eEEEEecCCCEEEEEeCCCCEEEEEcCCCe--
Q 009597 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYD-----QHLGAV-NTITFVDSNRRFVTSSDDKSLRVWEFGIPV-- 403 (531)
Q Consensus 332 ~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~-----~h~~~I-~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~-- 403 (531)
.+.+.. ...+++.+.||.+.++|. +++.+.... ....++ ....+.+++..++..+..+.+.+.|+....
T Consensus 171 ~~~~~~--~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~ 247 (373)
T 2mad_H 171 HIHPGA--PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT 247 (373)
T ss_pred EEEeCC--CceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce
Confidence 344433 356778888999999999 887664322 111221 234566766665555578899999986542
Q ss_pred EEEEeeCC---------CCCCccEEEEeCCCCEEEEEEc----------CCeEEEEEcCCcceeceeeeecCCccccceE
Q 009597 404 VIKYISEP---------HMHSMPSISLHPNTNWLAAQSL----------DNQILIYSTRERFQLNKKKRFAGHIVAGYAC 464 (531)
Q Consensus 404 ~~~~~~~~---------~~~~v~~v~~sp~~~~l~s~s~----------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~ 464 (531)
.+..+... .......+.++|+++.+++... .+.|.++|+.+.+.+..+. . .....
T Consensus 248 v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~-----g~~p~ 321 (373)
T 2mad_H 248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-L-----GHDVD 321 (373)
T ss_pred EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-C-----CCCcC
Confidence 22222110 0122334788999888887654 3589999999876654442 1 12356
Q ss_pred EEEEcCCCC-EEEEEe-CCCcEEEEECCCCeEEEEe
Q 009597 465 QVNFSPDGR-FVMSGD-GEGKCWFWDWKSCKVFRTL 498 (531)
Q Consensus 465 ~l~~spdg~-~l~sgs-~dg~I~iwd~~~~~~~~~~ 498 (531)
++.|+|||+ +++++. .++.|.+||..+++.+..+
T Consensus 322 ~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 322 AISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 699999999 777777 5899999999999999884
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.20 E-value=2.6e-10 Score=115.69 Aligned_cols=170 Identities=10% Similarity=0.074 Sum_probs=122.8
Q ss_pred ceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc-----------eeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEE
Q 009597 328 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE-----------ITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRV 396 (531)
Q Consensus 328 ~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~-----------~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~i 396 (531)
...+.+... ..++++|+.++ +.+|++.... ..... .+.. |..|+| ++++|+++ .++.|++
T Consensus 40 ~nlLais~~---~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 40 LQNLDISNS---KSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CBCEEEETT---TTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred ccEEEEcCC---CCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 444555543 35788888774 5559864322 22233 3556 999999 88999998 8899999
Q ss_pred EEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEE
Q 009597 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 476 (531)
Q Consensus 397 wd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~ 476 (531)
||+.+......+. .+...+.++.+.+. .+++++.||.|.+||+.++.... ....|.+++|||+| ++
T Consensus 111 ~dv~sl~~~~~~~-~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---------~~~~Vs~v~WSpkG--~~ 176 (388)
T 1xip_A 111 LDLEELSEFRTVT-SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---------LAQNVTSFDVTNSQ--LA 176 (388)
T ss_dssp EESSSTTCEEEEE-ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---------EEESEEEEEECSSE--EE
T ss_pred EEchhhhccCccc-eeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---------ccCCceEEEEcCCc--eE
Confidence 9998765443333 25556777666544 38889999999999998764321 13458999999999 67
Q ss_pred EEeCCCcEEEEECCCCeE--EEEe------e---ccCCcEEEEEEecCCCCEEEEE
Q 009597 477 SGDGEGKCWFWDWKSCKV--FRTL------K---CHEGVCIGCEWHPLEQSKVATC 521 (531)
Q Consensus 477 sgs~dg~I~iwd~~~~~~--~~~~------~---~h~~~V~~v~~~p~~~~~l~t~ 521 (531)
.|..||++++|+...+.+ ..++ . +|...|.++.|.+ +..++++-
T Consensus 177 vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~-~~~flv~y 231 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS-PQDFLAVF 231 (388)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS-SSEEEEEE
T ss_pred EEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEec-CCeEEEEE
Confidence 899999999999888776 5566 2 3778899999999 66666653
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.20 E-value=3.9e-09 Score=106.65 Aligned_cols=238 Identities=10% Similarity=0.053 Sum_probs=163.8
Q ss_pred CCceeeeeecccCeeeEEecCc-------cCceEEEEEccCCCEEEEEec--CCeEEEEeCCCCcEEEEccCCCcceEEE
Q 009597 262 KGEHVEDKSTFHGKCMRTYMGH-------SKAVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRTFSTGKIPYVVK 332 (531)
Q Consensus 262 ~~~~i~~~~~~~~~~~~~l~gH-------~~~V~~l~fspdg~~l~s~s~--Dg~I~vWd~~t~~~i~~~~~~~~~~~~~ 332 (531)
.++.|.+++..+.+.+.++.-. ...-..+.|+|||++|+.+.. ++.|.++|+.+++.+.++..... ..
T Consensus 107 ~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~---~~ 183 (386)
T 3sjl_D 107 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC---YH 183 (386)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EE
T ss_pred CCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc---ce
Confidence 3467899999999988887421 124567999999999888864 68999999999999999966442 22
Q ss_pred EccCCCCCcEEEEeeCCCeEEEEECCC-CceeEEEcccC----CCe-eEEEEe-cCCCEEEEEeCCCCEEEEEcCCCe--
Q 009597 333 LNPDDDKQNILLAGMSDKKIVQWDMNT-KEITQEYDQHL----GAV-NTITFV-DSNRRFVTSSDDKSLRVWEFGIPV-- 403 (531)
Q Consensus 333 ~~~~~~~~~~l~sg~~dg~I~iwd~~t-~~~~~~~~~h~----~~I-~~l~~s-p~~~~l~s~s~Dg~I~iwd~~~~~-- 403 (531)
+.+.. .+.+++.+.||++.+.++.+ ++.+.....+. .++ ....|. ++|++++ .+.+|.|.+.|+....
T Consensus 184 ~~P~g--~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~ 260 (386)
T 3sjl_D 184 IFPTA--PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAK 260 (386)
T ss_dssp EEEEE--TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCE
T ss_pred eecCC--CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcce
Confidence 33332 35677888999999999976 56543222221 222 224665 4665444 6668999999997653
Q ss_pred EEEEeeC---------CCCCCccEEEEeCCCCEEEEEEc----------CCeEEEEEcCCcceeceeeeecCCccccceE
Q 009597 404 VIKYISE---------PHMHSMPSISLHPNTNWLAAQSL----------DNQILIYSTRERFQLNKKKRFAGHIVAGYAC 464 (531)
Q Consensus 404 ~~~~~~~---------~~~~~v~~v~~sp~~~~l~s~s~----------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~ 464 (531)
.+..+.. -.......++++++++.+++... .+.|.++|+.+++.+..+.. ...+.
T Consensus 261 v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v------g~~~~ 334 (386)
T 3sjl_D 261 FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM------GHEID 334 (386)
T ss_dssp ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE------EEEEC
T ss_pred eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC------CCCcc
Confidence 3322220 01234556888999988888754 25799999999877654432 12356
Q ss_pred EEEEcCCCC-EEEEEe-CCCcEEEEECCCCeEEEEeeccCCcEEEEEEec
Q 009597 465 QVNFSPDGR-FVMSGD-GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512 (531)
Q Consensus 465 ~l~~spdg~-~l~sgs-~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p 512 (531)
.|.+++|++ +|+++. .++.|.++|..+++.+.++..-.. -..+.+++
T Consensus 335 ~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~-p~~l~~s~ 383 (386)
T 3sjl_D 335 SINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGH-GPQVITTA 383 (386)
T ss_dssp EEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCS-SCCEEEEC
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCC-CceeEECC
Confidence 699999997 666654 589999999999999999874322 23455555
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.20 E-value=8e-10 Score=121.76 Aligned_cols=238 Identities=11% Similarity=0.063 Sum_probs=146.4
Q ss_pred CccCceEEEEEccCCCEEEEE-----ecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCC-------
Q 009597 282 GHSKAVRDISFCNDGTKFLTA-----SYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD------- 349 (531)
Q Consensus 282 gH~~~V~~l~fspdg~~l~s~-----s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d------- 349 (531)
+|...|..++|||||++||-+ +....|++||+.+++.+...........+.|+ ++ ..|+.+..+
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg---~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GN---EGFFYSSYDKPDGSEL 201 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TT---TEEEEEESSCCC----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CC---CEEEEEEecCcccccc
Confidence 466689999999999988833 33357999999999876542111101233444 33 345555555
Q ss_pred ------CeEEEEECCCCce--eEEE--cc-cCCCeeEEEEecCCCEEEEEeC----CCCEEEEEcCCCe-EEEEeeCCCC
Q 009597 350 ------KKIVQWDMNTKEI--TQEY--DQ-HLGAVNTITFVDSNRRFVTSSD----DKSLRVWEFGIPV-VIKYISEPHM 413 (531)
Q Consensus 350 ------g~I~iwd~~t~~~--~~~~--~~-h~~~I~~l~~sp~~~~l~s~s~----Dg~I~iwd~~~~~-~~~~~~~~~~ 413 (531)
..|++|++.+... ...+ .. |...+..+.|+|++++|+.... +..|+++|+.++. ....+.. +.
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~-~~ 280 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG-DL 280 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC-SS
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC-CC
Confidence 3499999987653 3333 33 4456788999999998765443 2479999997763 2333332 33
Q ss_pred CCccEEEEeCCCCEEEEEEc-C---CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC-C--cEEE
Q 009597 414 HSMPSISLHPNTNWLAAQSL-D---NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE-G--KCWF 486 (531)
Q Consensus 414 ~~v~~v~~sp~~~~l~s~s~-D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d-g--~I~i 486 (531)
...... +++++..|+..+. + +.|.++++.++.. .....+..+... +. .|++++++|+....+ + .|++
T Consensus 281 ~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~--~~--~~s~~g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 281 DADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP-AHWRDLIPERQQ--VL--TVHSGSGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp SSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGCEEEECCCSS--CE--EEEEETTEEEEEEEETTEEEEEE
T ss_pred CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc-cccEEEecCCCC--EE--EEEEECCEEEEEEEECCeeEEEE
Confidence 344443 6666666665553 3 5799999887532 112233334322 32 789999988776644 3 6899
Q ss_pred EECCCCeEEEEee-ccCCcEEEEEEecCCCCEEEEEeCC---CCEEeeC
Q 009597 487 WDWKSCKVFRTLK-CHEGVCIGCEWHPLEQSKVATCGWD---GLIKYWD 531 (531)
Q Consensus 487 wd~~~~~~~~~~~-~h~~~V~~v~~~p~~~~~l~t~s~D---g~I~iWD 531 (531)
||+..+. ...+. .+.+.+..+.+++++..++++.+.. +.|..||
T Consensus 355 ~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 355 FDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp ECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred EECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence 9987544 44444 3445677788888555555554432 5677665
No 212
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.18 E-value=6.3e-10 Score=122.64 Aligned_cols=237 Identities=12% Similarity=0.010 Sum_probs=150.1
Q ss_pred HHHhhhhccCC-----CCCCCceeeeeecccCeeeEEecCccCce--EEEEEccCCCEEEEEecCCe-------------
Q 009597 248 YAKKKEEKGNA-----GGEKGEHVEDKSTFHGKCMRTYMGHSKAV--RDISFCNDGTKFLTASYDKN------------- 307 (531)
Q Consensus 248 ~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~~l~gH~~~V--~~l~fspdg~~l~s~s~Dg~------------- 307 (531)
..++++++.++ .|.+...|++|+..+++.+. ..+...+ .+++|+|||+.|+.++.|..
T Consensus 126 ~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~ 203 (695)
T 2bkl_A 126 WAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTT 203 (695)
T ss_dssp EEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCE
T ss_pred EEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCE
Confidence 45677887777 77777899999998887651 2233333 78999999999999998776
Q ss_pred EEEEeCCCCcE--EEEccC-CCcceEEEEccCCCCCcEEEEeeCCC----eEEEEECCCCceeEEEcccCCCeeEEEEec
Q 009597 308 IKYWDTETGQV--IRTFST-GKIPYVVKLNPDDDKQNILLAGMSDK----KIVQWDMNTKEITQEYDQHLGAVNTITFVD 380 (531)
Q Consensus 308 I~vWd~~t~~~--i~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~dg----~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp 380 (531)
|++|++.+++. ...+.. .+........++++... |+.++.++ .|.+|+..+++ ...+..+...+....+ +
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~ 280 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY-LFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-W 280 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC-EEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-E
T ss_pred EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE-EEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-c
Confidence 99999988762 222222 22223333333333334 44444343 67777765554 3445455566666667 4
Q ss_pred CCCEEEEEe---CCCCEEEEEcCCCeE--EEEeeCCC-CCCccEEEEeCCCCEEEEEEcCCeEEEEEcC-Ccceeceeee
Q 009597 381 SNRRFVTSS---DDKSLRVWEFGIPVV--IKYISEPH-MHSMPSISLHPNTNWLAAQSLDNQILIYSTR-ERFQLNKKKR 453 (531)
Q Consensus 381 ~~~~l~s~s---~Dg~I~iwd~~~~~~--~~~~~~~~-~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~-~~~~~~~~~~ 453 (531)
++.+++++. .++.|.+||+.++.. ...+...+ ...+..++++ ++.++++...|+..+||.+. .+..+ ..
T Consensus 281 ~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~---~~ 356 (695)
T 2bkl_A 281 KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPV---RT 356 (695)
T ss_dssp TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEE---EE
T ss_pred CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCee---EE
Confidence 555444443 257899999987642 12232223 4567788888 77788888999988887654 23222 22
Q ss_pred ecCCccccceEEEEEcCCCCEEEEEe----CCCcEEEEECCCCeE
Q 009597 454 FAGHIVAGYACQVNFSPDGRFVMSGD----GEGKCWFWDWKSCKV 494 (531)
Q Consensus 454 ~~~~~~~~~v~~l~~spdg~~l~sgs----~dg~I~iwd~~~~~~ 494 (531)
+..+. .+.+..++++|++..|+... ..+.|++||+.+++.
T Consensus 357 l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 357 VQLPG-VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp CCCSS-SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred ecCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 22221 23455678899998776333 347899999988763
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.17 E-value=1.4e-08 Score=99.44 Aligned_cols=220 Identities=12% Similarity=0.158 Sum_probs=142.9
Q ss_pred CCCCceeeeeecccCeeeEEec----CccCceEEEEEccC-CCEEEEEecCCeEEEEeCCCCcEEEE-ccCC-----Ccc
Q 009597 260 GEKGEHVEDKSTFHGKCMRTYM----GHSKAVRDISFCND-GTKFLTASYDKNIKYWDTETGQVIRT-FSTG-----KIP 328 (531)
Q Consensus 260 ~~~~~~i~~~~~~~~~~~~~l~----gH~~~V~~l~fspd-g~~l~s~s~Dg~I~vWd~~t~~~i~~-~~~~-----~~~ 328 (531)
+..++.+..|+..+++...... ++...+.+++++++ |++++ ++..+.|.+||.. ++.... .... ..+
T Consensus 42 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 119 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGC 119 (314)
T ss_dssp TEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCC
T ss_pred CCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCC
Confidence 3445667788766666543222 36678999999999 76444 4445579999998 776543 2211 123
Q ss_pred eEEEEccCCCCCcEEEEeeCC---------------CeEEEEECCCCceeEEEcccCCCeeEEEEe----cCCCEEEEE-
Q 009597 329 YVVKLNPDDDKQNILLAGMSD---------------KKIVQWDMNTKEITQEYDQHLGAVNTITFV----DSNRRFVTS- 388 (531)
Q Consensus 329 ~~~~~~~~~~~~~~l~sg~~d---------------g~I~iwd~~t~~~~~~~~~h~~~I~~l~~s----p~~~~l~s~- 388 (531)
..+.+.+. ++++++...+ +.|..||.. ++... +..+......++|+ ++++.++.+
T Consensus 120 ~~i~~d~~---g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 120 NDCAFDYE---GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp CEEEECTT---SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCEEECCC---CCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEE
Confidence 45555442 3566666554 577888766 55433 33344567899999 999765554
Q ss_pred eCCCCEEEEEcC-CCeEE--EEee--CCCC-CCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccc
Q 009597 389 SDDKSLRVWEFG-IPVVI--KYIS--EPHM-HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 462 (531)
Q Consensus 389 s~Dg~I~iwd~~-~~~~~--~~~~--~~~~-~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 462 (531)
..++.|.+||+. .+... ..+. ..+. ..+..++++++|+++++...++.|.+||..++..+.. +..+ ...
T Consensus 195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~---~~~~--~~~ 269 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMR---IRCP--FEK 269 (314)
T ss_dssp TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEE---EECS--SSC
T ss_pred CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEE---EeCC--CCC
Confidence 567899999986 34321 1111 1122 4577899999999888888899999999875543322 2222 245
Q ss_pred eEEEEEcCCCCEEEE-EeCCCcEEEEECCC
Q 009597 463 ACQVNFSPDGRFVMS-GDGEGKCWFWDWKS 491 (531)
Q Consensus 463 v~~l~~spdg~~l~s-gs~dg~I~iwd~~~ 491 (531)
+.+++|+++|+.|++ ...++.|..|++..
T Consensus 270 ~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 270 PSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 788999999995554 45668899999764
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.14 E-value=2.3e-09 Score=107.52 Aligned_cols=223 Identities=10% Similarity=0.051 Sum_probs=148.1
Q ss_pred CccCceEEEEEccCCCEEEEEec-----CCeEEEEeCCCCcEEEEccCCC-------cceEEEEccCCCCCcEEEEee--
Q 009597 282 GHSKAVRDISFCNDGTKFLTASY-----DKNIKYWDTETGQVIRTFSTGK-------IPYVVKLNPDDDKQNILLAGM-- 347 (531)
Q Consensus 282 gH~~~V~~l~fspdg~~l~s~s~-----Dg~I~vWd~~t~~~i~~~~~~~-------~~~~~~~~~~~~~~~~l~sg~-- 347 (531)
+|...+.+|+|+++++++++-.. +..|.+||+.+++.+..+.... ....+.+.+. .+.++++..
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~--~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLI--HNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETT--TTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecC--CCEEEEEcCcc
Confidence 46678999999999876555433 5789999999999877765431 2244455442 335556655
Q ss_pred -CCCeEEEEECCCCceeEEEcccCCCee-EEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCC
Q 009597 348 -SDKKIVQWDMNTKEITQEYDQHLGAVN-TITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNT 425 (531)
Q Consensus 348 -~dg~I~iwd~~t~~~~~~~~~h~~~I~-~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~ 425 (531)
.++.|.+||+.+++..+.+..|..... ...+..++..|.+.+.++.++.|. ..+..++|+|++
T Consensus 142 ~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~---------------~~~~gia~s~dg 206 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH---------------LGVNGIVLDAEN 206 (343)
T ss_dssp GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC---------------CCEEEEEECTTS
T ss_pred CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee---------------cccceeEeccCC
Confidence 678999999998888777765432111 144556777787788888876653 134679999999
Q ss_pred CEEEEEEcCC-eEEEEEcCCcc--ee------ceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 009597 426 NWLAAQSLDN-QILIYSTRERF--QL------NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFR 496 (531)
Q Consensus 426 ~~l~s~s~Dg-~I~iwd~~~~~--~~------~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~ 496 (531)
+.|+++...+ .|..++..... .+ ..+. ..++ .+....++++++|.++++...++.|.+||..+++...
T Consensus 207 ~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~--~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~ 283 (343)
T 2qe8_A 207 EWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE-RYSE--KPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKL 283 (343)
T ss_dssp CEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE-EEEE--CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE-eccc--CCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEE
Confidence 9998888776 55555532100 00 0001 1111 1234458999999999999899999999986676543
Q ss_pred Eeec-cCCcEEEEEEecCCCCEEEEEeCCC
Q 009597 497 TLKC-HEGVCIGCEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 497 ~~~~-h~~~V~~v~~~p~~~~~l~t~s~Dg 525 (531)
.... +...+.++++.+ ++.++++.+..+
T Consensus 284 ~~~~~~~~~p~~va~~~-~g~l~v~~~~~~ 312 (343)
T 2qe8_A 284 LVTDEKLSWTDSFNFGS-DGYLYFDCNQLH 312 (343)
T ss_dssp EEECGGGSCEEEEEECT-TSCEEEEECCGG
T ss_pred EEECCceecCCeeEECC-CCcEEEEeCccc
Confidence 3332 234688999998 667777766443
No 215
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.13 E-value=2.7e-09 Score=116.95 Aligned_cols=264 Identities=14% Similarity=0.084 Sum_probs=175.2
Q ss_pred CceeeeeecccCeeeEEecCccCc-----------eEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-Ccc--
Q 009597 263 GEHVEDKSTFHGKCMRTYMGHSKA-----------VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KIP-- 328 (531)
Q Consensus 263 ~~~i~~~~~~~~~~~~~l~gH~~~-----------V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~~-- 328 (531)
++.+..++..+|+.+.++...... ...+++ ++..|+.++.|+.|..+|..+|+.+..+... ...
T Consensus 86 ~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~ 163 (677)
T 1kb0_A 86 WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGS 163 (677)
T ss_dssp GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSS
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcC
Confidence 456777788888888887654321 122333 3557888899999999999999999888654 210
Q ss_pred eEEEEccCCCCCcEEEEeeC------CCeEEEEECCCCceeEEEcccCCC------------------------------
Q 009597 329 YVVKLNPDDDKQNILLAGMS------DKKIVQWDMNTKEITQEYDQHLGA------------------------------ 372 (531)
Q Consensus 329 ~~~~~~~~~~~~~~l~sg~~------dg~I~iwd~~t~~~~~~~~~h~~~------------------------------ 372 (531)
..+...+.-.. ..+++++. ++.|+.||..+++.+..+......
T Consensus 164 ~~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~ 242 (677)
T 1kb0_A 164 LTITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGG 242 (677)
T ss_dssp CBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEEC
T ss_pred cccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCc
Confidence 00000110012 34555553 799999999999998877543211
Q ss_pred --eeEEEEecCCCEEEEEeCCC-------------------CEEEEEcCCCeEEEEeeCCCC--------CCccEEEEeC
Q 009597 373 --VNTITFVDSNRRFVTSSDDK-------------------SLRVWEFGIPVVIKYISEPHM--------HSMPSISLHP 423 (531)
Q Consensus 373 --I~~l~~sp~~~~l~s~s~Dg-------------------~I~iwd~~~~~~~~~~~~~~~--------~~v~~v~~sp 423 (531)
...+++.+++.+++.++.++ .|..+|..+++.+-.+...+. .....+....
T Consensus 243 ~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~ 322 (677)
T 1kb0_A 243 TMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI 322 (677)
T ss_dssp CCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE
T ss_pred ccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc
Confidence 13578899888888887664 499999999988776654221 1122233334
Q ss_pred CC---CEEEEEEcCCeEEEEEcCCcceeceeeeecCC------ccc------------------------cceEEEEEcC
Q 009597 424 NT---NWLAAQSLDNQILIYSTRERFQLNKKKRFAGH------IVA------------------------GYACQVNFSP 470 (531)
Q Consensus 424 ~~---~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~------~~~------------------------~~v~~l~~sp 470 (531)
+| ..++.++.+|.|.++|..+++.+.....-... ... ..-..++|+|
T Consensus 323 dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp 402 (677)
T 1kb0_A 323 AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP 402 (677)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET
T ss_pred CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC
Confidence 67 68899999999999999998766443211000 000 0001368899
Q ss_pred CCCEEEEEeC-------------------------------------------CCcEEEEECCCCeEEEEeeccCCcEEE
Q 009597 471 DGRFVMSGDG-------------------------------------------EGKCWFWDWKSCKVFRTLKCHEGVCIG 507 (531)
Q Consensus 471 dg~~l~sgs~-------------------------------------------dg~I~iwd~~~~~~~~~~~~h~~~V~~ 507 (531)
++.++++... .|.|..||+.+++.+..+.. ..++.+
T Consensus 403 ~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~ 481 (677)
T 1kb0_A 403 QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNG 481 (677)
T ss_dssp TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCC
T ss_pred CCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcC
Confidence 9888877543 27899999999999888763 333444
Q ss_pred EEEecCCCCEEEEEeCCCCEEeeC
Q 009597 508 CEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 508 v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
..+.. .+.+++.++.||.|++||
T Consensus 482 g~~~~-~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 482 GTLTT-AGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp CEEEE-TTTEEEEECTTSEEEEEE
T ss_pred cceEe-CCCEEEEECCCCcEEEEE
Confidence 55566 556788889999999987
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.12 E-value=6.1e-09 Score=107.00 Aligned_cols=226 Identities=11% Similarity=0.074 Sum_probs=161.3
Q ss_pred CCceeeeeecccCeeeEEecCc-------cCceEEEEEccCCCEEEEEec--CCeEEEEeCCCCcEEEEccCCCcceEEE
Q 009597 262 KGEHVEDKSTFHGKCMRTYMGH-------SKAVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRTFSTGKIPYVVK 332 (531)
Q Consensus 262 ~~~~i~~~~~~~~~~~~~l~gH-------~~~V~~l~fspdg~~l~s~s~--Dg~I~vWd~~t~~~i~~~~~~~~~~~~~ 332 (531)
.++.|.+++..+++.+.++.-- ......+.|+|||++|+.+.. ++.|.+.|+.+++.+.++..... ..
T Consensus 147 ~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~ 223 (426)
T 3c75_H 147 RTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YH 223 (426)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EE
T ss_pred CCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---ee
Confidence 4567888999888888877421 234568899999999998874 57899999999999999876543 23
Q ss_pred EccCCCCCcEEEEeeCCCeEEEEECCCCceeEE----EcccCCCe-eEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEE-
Q 009597 333 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE----YDQHLGAV-NTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIK- 406 (531)
Q Consensus 333 ~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~----~~~h~~~I-~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~- 406 (531)
+.+... ..+++.+.||.+.+.++.+++.... +.....++ ..+.+.+++..++..+..+.|.+.|+.......
T Consensus 224 ~~p~g~--~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~ 301 (426)
T 3c75_H 224 IFPASP--TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFR 301 (426)
T ss_dssp EEEEET--TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEEC
T ss_pred eccCCC--cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEe
Confidence 334332 5677788899999999866665532 22112222 245678898888888888999999986553221
Q ss_pred -EeeCC---------CCCCccEEEEeCCCCEEEEEEc----------CCeEEEEEcCCcceeceeeeecCCccccceEEE
Q 009597 407 -YISEP---------HMHSMPSISLHPNTNWLAAQSL----------DNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 466 (531)
Q Consensus 407 -~~~~~---------~~~~v~~v~~sp~~~~l~s~s~----------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l 466 (531)
.+... .......++++|+++.+++... .+.|.++|+.+.+.+..+.. ......+
T Consensus 302 ~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v------g~~P~gi 375 (426)
T 3c75_H 302 APIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL------GHEIDSI 375 (426)
T ss_dssp CCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE------EEEECEE
T ss_pred eeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC------CCCcCeE
Confidence 11100 0112234789999888777653 35799999999876654432 1235669
Q ss_pred EEcCCCC-EEEEEe-CCCcEEEEECCCCeEEEEe
Q 009597 467 NFSPDGR-FVMSGD-GEGKCWFWDWKSCKVFRTL 498 (531)
Q Consensus 467 ~~spdg~-~l~sgs-~dg~I~iwd~~~~~~~~~~ 498 (531)
.|+|||+ ++++.. .++.|.++|..+++.+.++
T Consensus 376 a~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 376 NVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9999999 888887 5899999999999999987
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.12 E-value=3.4e-09 Score=107.02 Aligned_cols=248 Identities=9% Similarity=-0.108 Sum_probs=165.8
Q ss_pred eeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEe----------cCCeEEEEeCCCCcEEEEccCC--------C
Q 009597 265 HVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTAS----------YDKNIKYWDTETGQVIRTFSTG--------K 326 (531)
Q Consensus 265 ~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s----------~Dg~I~vWd~~t~~~i~~~~~~--------~ 326 (531)
.+.+.+..+++.+.++..-..+ .+.|+||+++++.+. .++.|.+||+.+++.+.++..+ .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 6778899999999999766666 799999999988886 3689999999999999998654 4
Q ss_pred cceEEEEccCCCCCcEEEEee-C-CCeEEE--EECCCCceeEEEcccCCCeeEEEEecCC-CEEEEEeCCCCEEEEEcCC
Q 009597 327 IPYVVKLNPDDDKQNILLAGM-S-DKKIVQ--WDMNTKEITQEYDQHLGAVNTITFVDSN-RRFVTSSDDKSLRVWEFGI 401 (531)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~sg~-~-dg~I~i--wd~~t~~~~~~~~~h~~~I~~l~~sp~~-~~l~s~s~Dg~I~iwd~~~ 401 (531)
.+..+.++++.. +++++. . +..|.+ +|+.+ +..+... +. +.+.|++ +.+++.+.|+.+.+.|+..
T Consensus 125 ~P~~ia~SpDGk---~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 125 RVHIIGNCASSA---CLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp CTTSEEECTTSS---CEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred CcceEEEcCCCC---EEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 567778887653 355544 3 467888 89877 4444321 11 2233433 4566777899998899886
Q ss_pred -----CeEEEE---eeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcc--eeceeeee------cCCccccceEE
Q 009597 402 -----PVVIKY---ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERF--QLNKKKRF------AGHIVAGYACQ 465 (531)
Q Consensus 402 -----~~~~~~---~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~--~~~~~~~~------~~~~~~~~v~~ 465 (531)
++.... .......+. . .+++..++..+. +.|.+.|+.... .+..+... .+.. ......
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~-p~g~~~ 268 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFR-SAGFQM 268 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEE-ECSSSC
T ss_pred ccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccc-cCccee
Confidence 322110 000011222 3 666666666666 999999986532 11111100 0000 111112
Q ss_pred EEEcCCCCEEEEEeC---------CCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEe-CCCCEEeeC
Q 009597 466 VNFSPDGRFVMSGDG---------EGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYWD 531 (531)
Q Consensus 466 l~~spdg~~l~sgs~---------dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s-~Dg~I~iWD 531 (531)
++++|+++.++++.. ++.+.++|+.+.+.+..+.... ...+++|+|++..+++++. .++.|.++|
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 679999998887643 2356699999999999987554 4789999995555788888 599999987
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.11 E-value=7e-11 Score=120.06 Aligned_cols=195 Identities=15% Similarity=0.097 Sum_probs=113.6
Q ss_pred CCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCC-e
Q 009597 295 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA-V 373 (531)
Q Consensus 295 dg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~-I 373 (531)
++..+++++.|+.|+.||..+|+.+..+.. .......+. ..+.++++++.||.|+.||..+++.+..+..+... +
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~---~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTH---VEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC--------CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceE---cCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 567899999999999999999999988866 222211111 23356778889999999999999887776544211 1
Q ss_pred e-EEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceee
Q 009597 374 N-TITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452 (531)
Q Consensus 374 ~-~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~ 452 (531)
. +..+. .+..+++++.|+.|+.||..+++.+..+.... ...++|++..+++++.++.|..||.+++..+....
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 1 11111 34567888889999999999998776554321 23456688899999999999999999886554332
Q ss_pred eecCCccccceEEEEEcCCC---CEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEE
Q 009597 453 RFAGHIVAGYACQVNFSPDG---RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 507 (531)
Q Consensus 453 ~~~~~~~~~~v~~l~~spdg---~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~ 507 (531)
.. .. ....++.+. ..+++++.+|.|+.||..+++.+..+.. ..++..
T Consensus 158 ~~-~~------~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~ 207 (369)
T 2hz6_A 158 YF-DY------AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVA 207 (369)
T ss_dssp EE-EE------CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEE
T ss_pred cc-cc------cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEE
Confidence 11 11 112333332 4577788999999999999999887774 344443
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.10 E-value=5.8e-08 Score=98.98 Aligned_cols=223 Identities=15% Similarity=0.194 Sum_probs=148.0
Q ss_pred cCCCEEE-EEecCCeEEEEeCCCC----cEEEEcc-------CC-CcceEEEEccCCCCCcEEEEeeCC------CeEEE
Q 009597 294 NDGTKFL-TASYDKNIKYWDTETG----QVIRTFS-------TG-KIPYVVKLNPDDDKQNILLAGMSD------KKIVQ 354 (531)
Q Consensus 294 pdg~~l~-s~s~Dg~I~vWd~~t~----~~i~~~~-------~~-~~~~~~~~~~~~~~~~~l~sg~~d------g~I~i 354 (531)
+++++|+ ++..+++|.|+|+.+. +.++++. .+ ..+..+.+.++ + +++++..+ |.|.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd---G-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD---A-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS---C-EEEEEEEETTSCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC---e-EEEEcCCCcCCCCCCeEEE
Confidence 6777655 5666789999999765 6777763 12 12333444443 2 66666555 78999
Q ss_pred EECCCCceeEEEcccCCC---eeEEEEecCCCEEEEEe-------------------CCCCEEEEEcCCCeEEEEeeCCC
Q 009597 355 WDMNTKEITQEYDQHLGA---VNTITFVDSNRRFVTSS-------------------DDKSLRVWEFGIPVVIKYISEPH 412 (531)
Q Consensus 355 wd~~t~~~~~~~~~h~~~---I~~l~~sp~~~~l~s~s-------------------~Dg~I~iwd~~~~~~~~~~~~~~ 412 (531)
+|..+++++..+.....+ -..+.|+|+++.++++. ...+|.+||+.+.+.+..+..+.
T Consensus 169 lD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~ 248 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE 248 (462)
T ss_dssp ECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT
T ss_pred EECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC
Confidence 999999999988643222 34588899999888885 36789999999988888776532
Q ss_pred C-CCccEEEE--eCCCCEEEEEEc------CCeEEEEEcCCcceeceeeee-------cCCc---------cccceEEEE
Q 009597 413 M-HSMPSISL--HPNTNWLAAQSL------DNQILIYSTRERFQLNKKKRF-------AGHI---------VAGYACQVN 467 (531)
Q Consensus 413 ~-~~v~~v~~--sp~~~~l~s~s~------Dg~I~iwd~~~~~~~~~~~~~-------~~~~---------~~~~v~~l~ 467 (531)
. .....+.| +|+++++.+++. +++|.+|....+. ....+.+ .+.. .......|.
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-eeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 2 22334545 999999888774 5688776654321 1111110 0000 013456689
Q ss_pred EcCCCCEEEEEe-CCCcEEEEECC---CCeEEEEeeccC--------------CcEEEEEEecCCCCEEEEEe
Q 009597 468 FSPDGRFVMSGD-GEGKCWFWDWK---SCKVFRTLKCHE--------------GVCIGCEWHPLEQSKVATCG 522 (531)
Q Consensus 468 ~spdg~~l~sgs-~dg~I~iwd~~---~~~~~~~~~~h~--------------~~V~~v~~~p~~~~~l~t~s 522 (531)
+|+||++|.++. ..+.|.+||+. +.+++..+.... +.-..+.++| ++++|+.+.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp-DGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISR-DGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECT-TSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcC-CCCEEEEEc
Confidence 999999998887 46799999985 346666665321 1247889999 666666555
No 220
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.10 E-value=4.1e-08 Score=99.29 Aligned_cols=253 Identities=10% Similarity=0.068 Sum_probs=164.0
Q ss_pred CCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEE--EccCCC
Q 009597 261 EKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK--LNPDDD 338 (531)
Q Consensus 261 ~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~--~~~~~~ 338 (531)
..++.+..++..+|+.+..+..+.......... +..++.++.++.|..+|..+|+.+..+.......... ..+...
T Consensus 110 ~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~ 187 (376)
T 3q7m_A 110 SEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA 187 (376)
T ss_dssp ETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE
T ss_pred cCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE
Confidence 345677888888888887776543322222222 3468888889999999999999988776543221000 000001
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEcccCCC----------e-eEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEE
Q 009597 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA----------V-NTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKY 407 (531)
Q Consensus 339 ~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~----------I-~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~ 407 (531)
...+++++.++.|..+|..+++.+..+...... + ..... .+..++.++.++.|..+|..+++.+..
T Consensus 188 -~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~ 264 (376)
T 3q7m_A 188 -FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSGQIMWK 264 (376)
T ss_dssp -TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTCCEEEE
T ss_pred -CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCCcEEee
Confidence 246888889999999999999988776532110 1 11111 356788888899999999999887755
Q ss_pred eeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEE
Q 009597 408 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 487 (531)
Q Consensus 408 ~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iw 487 (531)
... .....+.. .+..+++++.++.|..+|..++..+............. ... .+..|++++.+|.|+++
T Consensus 265 ~~~---~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~----~~~--~~~~l~v~~~~g~l~~~ 333 (376)
T 3q7m_A 265 REL---GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTS----PVL--YNGNLVVGDSEGYLHWI 333 (376)
T ss_dssp ECC---CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCC----CEE--ETTEEEEECTTSEEEEE
T ss_pred ccC---CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccC----CEE--ECCEEEEEeCCCeEEEE
Confidence 432 22333333 46778888999999999999886654332121111111 222 25688899999999999
Q ss_pred ECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 488 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 488 d~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
|..+++.+..+......+....... +..|+.++.+|.|..||
T Consensus 334 d~~tG~~~~~~~~~~~~~~~~~~~~--~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 334 NVEDGRFVAQQKVDSSGFQTEPVAA--DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ETTTCCEEEEEECCTTCBCSCCEEE--TTEEEEEBTTSCEEEEE
T ss_pred ECCCCcEEEEEecCCCcceeCCEEE--CCEEEEEeCCCEEEEEe
Confidence 9999999888776433333222222 34678888999999875
No 221
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.09 E-value=1.2e-08 Score=113.21 Aligned_cols=228 Identities=7% Similarity=-0.004 Sum_probs=137.1
Q ss_pred cCCCEEEEEecCCe---EEEEe--CC---CCcEEEEc-----cCCCcceEEEEccCCCCCcEEEEee-CCC----eEEEE
Q 009597 294 NDGTKFLTASYDKN---IKYWD--TE---TGQVIRTF-----STGKIPYVVKLNPDDDKQNILLAGM-SDK----KIVQW 355 (531)
Q Consensus 294 pdg~~l~s~s~Dg~---I~vWd--~~---t~~~i~~~-----~~~~~~~~~~~~~~~~~~~~l~sg~-~dg----~I~iw 355 (531)
|+|++++....++. -.||. .. .+.....+ ...+......+.+++++ ..|+.+. .+| .|++|
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDG-RLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTS-SEEEEEEEETTCSEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCC-CEEEEEEcCCCCceEEEEEE
Confidence 77877775554432 44454 33 33322221 12221123333333333 4454443 333 69999
Q ss_pred ECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCC--------------EEEEEcCCCeE--EEEeeC-CCCCCccE
Q 009597 356 DMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKS--------------LRVWEFGIPVV--IKYISE-PHMHSMPS 418 (531)
Q Consensus 356 d~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~--------------I~iwd~~~~~~--~~~~~~-~~~~~v~~ 418 (531)
|+.+++.+... .+...+..++|+|+ +.|+.++.++. |++|++.++.. ...... .+...+..
T Consensus 195 dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 99999876542 12223467899999 99988887664 88999987642 122221 22335789
Q ss_pred EEEeCCCCEEEEEEcCC-----eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeC----CCcEEEEEC
Q 009597 419 ISLHPNTNWLAAQSLDN-----QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG----EGKCWFWDW 489 (531)
Q Consensus 419 v~~sp~~~~l~s~s~Dg-----~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~----dg~I~iwd~ 489 (531)
+.|+|+|++|+..+.++ .|.+||+.++... ....+..+.. ..... ++|+|..|+..+. .+.|++||+
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~--~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG-PVTALIPDLK--AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC-CCEEEECSSS--SCEEE-EEEETTEEEEEECTTCTTCEEEEEEC
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc-ccEEecCCCC--ceEEE-EeccCCEEEEEECCCCCCCEEEEEeC
Confidence 99999999999888654 8999998765110 0122222221 12223 3588988887765 345999999
Q ss_pred CCC--eEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 490 KSC--KVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 490 ~~~--~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
.++ .....+..+...+..+.|. ++.++++...|+..+||
T Consensus 349 ~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~ 389 (741)
T 1yr2_A 349 SGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVL 389 (741)
T ss_dssp SSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEE
T ss_pred CCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEE
Confidence 874 3444444555566677777 45688888889988877
No 222
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.09 E-value=4.8e-09 Score=115.22 Aligned_cols=265 Identities=14% Similarity=0.072 Sum_probs=172.6
Q ss_pred CCceeeeeecccCeeeEEecCccCc----------e-EEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC-Ccc-
Q 009597 262 KGEHVEDKSTFHGKCMRTYMGHSKA----------V-RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KIP- 328 (531)
Q Consensus 262 ~~~~i~~~~~~~~~~~~~l~gH~~~----------V-~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~~- 328 (531)
.++.+..++..+|+.+..+..+... + ..+.+ .+..|+.++.|+.|..+|..+|+.+..+... ...
T Consensus 78 ~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~ 155 (689)
T 1yiq_A 78 PFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKR 155 (689)
T ss_dssp GGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTS
T ss_pred CCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCC
Confidence 3456777888888888887654321 0 11222 3457888999999999999999999887654 111
Q ss_pred -eEEEEccCCCCCcEEEEee------CCCeEEEEECCCCceeEEEcccC-------------------------------
Q 009597 329 -YVVKLNPDDDKQNILLAGM------SDKKIVQWDMNTKEITQEYDQHL------------------------------- 370 (531)
Q Consensus 329 -~~~~~~~~~~~~~~l~sg~------~dg~I~iwd~~t~~~~~~~~~h~------------------------------- 370 (531)
..+...+.-.. ..+++++ .+|.|+.||..+++.+..+....
T Consensus 156 ~~~~~~sP~v~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~ 234 (689)
T 1yiq_A 156 SYTITGAPRVVN-GKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGG 234 (689)
T ss_dssp CCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEEC
T ss_pred CccccCCcEEEC-CEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCC
Confidence 11111110012 3455554 36899999999999988775210
Q ss_pred CCeeEEEEecCCCEEEEEeCCCC-------------------EEEEEcCCCeEEEEeeCC-CC-------CCccEEEEeC
Q 009597 371 GAVNTITFVDSNRRFVTSSDDKS-------------------LRVWEFGIPVVIKYISEP-HM-------HSMPSISLHP 423 (531)
Q Consensus 371 ~~I~~l~~sp~~~~l~s~s~Dg~-------------------I~iwd~~~~~~~~~~~~~-~~-------~~v~~v~~sp 423 (531)
.....+++.|+..+++.++.++. |..||..+++.+-.+... |. ..+....+..
T Consensus 235 ~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~ 314 (689)
T 1yiq_A 235 TAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI 314 (689)
T ss_dssp CCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred ccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc
Confidence 11125788998899999887763 999999999887766542 21 1111222223
Q ss_pred CCC---EEEEEEcCCeEEEEEcCCcceeceeeeec-------------------------CC---------ccccceEEE
Q 009597 424 NTN---WLAAQSLDNQILIYSTRERFQLNKKKRFA-------------------------GH---------IVAGYACQV 466 (531)
Q Consensus 424 ~~~---~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~-------------------------~~---------~~~~~v~~l 466 (531)
+|+ .++.++.+|.|+++|..+++.+.....-. .. ........+
T Consensus 315 ~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~ 394 (689)
T 1yiq_A 315 DGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPM 394 (689)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCC
T ss_pred CCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcc
Confidence 554 78889999999999999987663221100 00 000001126
Q ss_pred EEcCCCCEEEEEeC---------------------------------------------CCcEEEEECCCCeEEEEeecc
Q 009597 467 NFSPDGRFVMSGDG---------------------------------------------EGKCWFWDWKSCKVFRTLKCH 501 (531)
Q Consensus 467 ~~spdg~~l~sgs~---------------------------------------------dg~I~iwd~~~~~~~~~~~~h 501 (531)
+|+|+..+|++... +|.|+.||+.+++.+..+..+
T Consensus 395 a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~ 474 (689)
T 1yiq_A 395 SYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV 474 (689)
T ss_dssp EEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES
T ss_pred eECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC
Confidence 88898888877532 377999999999999888755
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 502 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 502 ~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.. +....+.. .+.+|+.++.||.|+.||
T Consensus 475 ~~-~~~g~~~t-agglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 475 TI-FNGGTLST-AGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp SS-CCCCEEEE-TTTEEEEECTTSEEEEEE
T ss_pred CC-ccCccceE-CCCEEEEECCCCcEEEEE
Confidence 43 33335555 566888999999999997
No 223
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.08 E-value=3.3e-08 Score=94.76 Aligned_cols=214 Identities=10% Similarity=0.037 Sum_probs=149.4
Q ss_pred cCeeeEEecCccC--ceEEEEEccCCCEEEEEec--CCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeC
Q 009597 273 HGKCMRTYMGHSK--AVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMS 348 (531)
Q Consensus 273 ~~~~~~~l~gH~~--~V~~l~fspdg~~l~s~s~--Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~ 348 (531)
+.+.+.++. |.. ....|.|++++.++++.+. ++.|.+.|+.+++.+..+..........+...+ ..+.++.-.
T Consensus 8 ~~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g--~~lyv~t~~ 84 (266)
T 2iwa_A 8 IVEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN--EKLYQVVWL 84 (266)
T ss_dssp EEEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEETT
T ss_pred CceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC--CEEEEEEec
Confidence 456677774 554 3689999998765555543 579999999999999998765544444444433 367777778
Q ss_pred CCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCC----CCccEEEEeCC
Q 009597 349 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHM----HSMPSISLHPN 424 (531)
Q Consensus 349 dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~----~~v~~v~~sp~ 424 (531)
++.|.++|..+.+.+.++...... ...+++++++++++..++.|.++|..+.+.+..+..... ..+..+.|. +
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d 161 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N 161 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-C
Confidence 999999999999999988643122 234556787777777788999999999888887764321 135577787 6
Q ss_pred CCEEEEEEcCCeEEEEEcCCcceeceeeeec--------CCccccceEEEEEcCCCCEE-EEEeCCCcEEEEECCCC
Q 009597 425 TNWLAAQSLDNQILIYSTRERFQLNKKKRFA--------GHIVAGYACQVNFSPDGRFV-MSGDGEGKCWFWDWKSC 492 (531)
Q Consensus 425 ~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~--------~~~~~~~v~~l~~spdg~~l-~sgs~dg~I~iwd~~~~ 492 (531)
+..++....++.|.+.|..++..+..+..-. .+......+.|+|+|+++.| +++...+.|++.++...
T Consensus 162 g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 7555555467899999999987665443210 01111346789999998655 45557788888887543
No 224
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.07 E-value=2.8e-08 Score=102.24 Aligned_cols=225 Identities=11% Similarity=0.105 Sum_probs=147.1
Q ss_pred hccCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCC--eEEEEeCCCCcEEEEc----c-CCC
Q 009597 254 EKGNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDK--NIKYWDTETGQVIRTF----S-TGK 326 (531)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg--~I~vWd~~t~~~i~~~----~-~~~ 326 (531)
+.+......+..|..++...++........ .... ++|+++++.|+++..++ .|.+|+...+.....+ . ...
T Consensus 142 g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~ 219 (409)
T 3hrp_A 142 NTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSG 219 (409)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCS
T ss_pred CCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcC
Confidence 334444445567888887766666555543 3334 99999999999888766 7999998766554443 2 333
Q ss_pred cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEE----EcccCCCe--eEEEEecC-CCEEEEEeCCCCEEEEEc
Q 009597 327 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE----YDQHLGAV--NTITFVDS-NRRFVTSSDDKSLRVWEF 399 (531)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~----~~~h~~~I--~~l~~sp~-~~~l~s~s~Dg~I~iwd~ 399 (531)
.+..+.+.+. .+. |+++..++.|+.||..++..... ..++...- +.++|+|+ +.++++-..++.|+.|+.
T Consensus 220 ~p~~iav~p~--~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 220 KIGAVALDET--EEW-LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp CCCBCEECTT--SSE-EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred CcEEEEEeCC--CCe-EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 4455666553 234 44467789999999987764332 22222222 39999995 556666667788999998
Q ss_pred CCCeEEEEeeCCC--------------CCCccEEEEeCCCCEEEEEE-cCCeEEEEEcCCcceeceeeeecCC-------
Q 009597 400 GIPVVIKYISEPH--------------MHSMPSISLHPNTNWLAAQS-LDNQILIYSTRERFQLNKKKRFAGH------- 457 (531)
Q Consensus 400 ~~~~~~~~~~~~~--------------~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~~~~~------- 457 (531)
.... ..+.... ......++++|+|+++++-+ .++.|+.|++.++... .+.++
T Consensus 297 ~g~~--~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~----~~~g~~~~~g~~ 370 (409)
T 3hrp_A 297 DGEC--EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS----TVAGQVDVASQI 370 (409)
T ss_dssp TCCE--EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE----EEEECTTCBSCC
T ss_pred CCCE--EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE----EEeCCCCCCCcC
Confidence 7542 2222111 23467899999999777777 7899999997665322 11111
Q ss_pred ------ccccceEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 009597 458 ------IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 489 (531)
Q Consensus 458 ------~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~ 489 (531)
..-.....++++++|.++++-..++.|+.+++
T Consensus 371 ~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 371 DGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 00134777999999888888888888887764
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.03 E-value=9.5e-08 Score=96.58 Aligned_cols=252 Identities=10% Similarity=0.060 Sum_probs=160.7
Q ss_pred CCCceeeeeecccCeeeEEecCc---------cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEE
Q 009597 261 EKGEHVEDKSTFHGKCMRTYMGH---------SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 331 (531)
Q Consensus 261 ~~~~~i~~~~~~~~~~~~~l~gH---------~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~ 331 (531)
..++.+..++..+++.+..+... ...+.+.-.. ++..++.++.++.|..+|..+|+.+..+.........
T Consensus 60 ~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~ 138 (376)
T 3q7m_A 60 DRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSR 138 (376)
T ss_dssp CTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred cCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcC
Confidence 44567788888888888766542 1223222222 3456888888999999999999998777654322111
Q ss_pred EEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCe-----eEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEE
Q 009597 332 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAV-----NTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIK 406 (531)
Q Consensus 332 ~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I-----~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~ 406 (531)
.... +..+++++.++.|..+|..+++.+..+....... ...... +..++.++.++.|..+|..+++.+.
T Consensus 139 p~~~----~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w 212 (376)
T 3q7m_A 139 PVVS----DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIW 212 (376)
T ss_dssp CEEE----TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEE
T ss_pred CEEE----CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEE
Confidence 1111 2468888899999999999999888776533221 222222 4568888889999999999988776
Q ss_pred EeeCCCCCC------ccEEEEeC--CCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEE
Q 009597 407 YISEPHMHS------MPSISLHP--NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG 478 (531)
Q Consensus 407 ~~~~~~~~~------v~~v~~sp--~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sg 478 (531)
......... +..+...| .+..+++++.++.|..+|..++..+.... . . ....+.. ++..|+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~-~-~-----~~~~~~~--~~~~l~~~ 283 (376)
T 3q7m_A 213 QQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE-L-G-----SVNDFIV--DGNRIYLV 283 (376)
T ss_dssp EEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC-C-C-----CEEEEEE--ETTEEEEE
T ss_pred EEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc-C-C-----CCCCceE--ECCEEEEE
Confidence 554321100 00011111 35677888889999999998876553322 1 1 1222333 46678888
Q ss_pred eCCCcEEEEECCCCeEEEEeec-cCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 479 DGEGKCWFWDWKSCKVFRTLKC-HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 479 s~dg~I~iwd~~~~~~~~~~~~-h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+.++.|..+|..+++.+..... ....+...... +..|+.++.+|.|.++|
T Consensus 284 ~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~---~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 284 DQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY---NGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp ETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE---TTEEEEECTTSEEEEEE
T ss_pred cCCCeEEEEECCCCcEEEeecccCCCcccCCEEE---CCEEEEEeCCCeEEEEE
Confidence 8999999999999998877652 22222333332 24677788888888775
No 226
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.01 E-value=2.2e-07 Score=90.84 Aligned_cols=184 Identities=15% Similarity=0.187 Sum_probs=121.8
Q ss_pred CCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCC---CCC
Q 009597 338 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEP---HMH 414 (531)
Q Consensus 338 ~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~---~~~ 414 (531)
..+.++++...++.|+.||..++.. ..+. ....+.+++++++++++++ . ++.|.+||..++......... ...
T Consensus 23 ~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~ 98 (297)
T 3g4e_A 23 VSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNN 98 (297)
T ss_dssp TTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCC
Confidence 3456788888899999999988765 3332 4578999999999995554 4 567999999887654333221 223
Q ss_pred CccEEEEeCCCCEEEEEEcC---------CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEE-EeCCCcE
Q 009597 415 SMPSISLHPNTNWLAAQSLD---------NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS-GDGEGKC 484 (531)
Q Consensus 415 ~v~~v~~sp~~~~l~s~s~D---------g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s-gs~dg~I 484 (531)
.+..++++|+|+++++.... ....||.+.....+... ... ......++|+|+++.|+. .+.++.|
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~---~~~--~~~pngi~~spdg~~lyv~~~~~~~i 173 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKY---FDQ--VDISNGLDWSLDHKIFYYIDSLSYSV 173 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEE---EEE--ESBEEEEEECTTSCEEEEEEGGGTEE
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEE---eec--cccccceEEcCCCCEEEEecCCCCcE
Confidence 57789999999976655332 22345544322112111 111 123567999999987754 5567899
Q ss_pred EEEEC--CCCeE-----EEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 485 WFWDW--KSCKV-----FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 485 ~iwd~--~~~~~-----~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++|++ .++.. +..+..+.+.+..+++.+ ++.+.++....+.|.+||
T Consensus 174 ~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 174 DAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp EEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEEEC
T ss_pred EEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEc
Confidence 99987 45543 233333446678999999 667777777777888886
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.99 E-value=1.5e-07 Score=90.16 Aligned_cols=206 Identities=8% Similarity=-0.023 Sum_probs=139.5
Q ss_pred CcEEEEccCCCcc--eEEEEccCCCCCcEEEEeeC--CCeEEEEECCCCceeEEEcccCC-CeeEEEEecCCCEEEEEeC
Q 009597 316 GQVIRTFSTGKIP--YVVKLNPDDDKQNILLAGMS--DKKIVQWDMNTKEITQEYDQHLG-AVNTITFVDSNRRFVTSSD 390 (531)
Q Consensus 316 ~~~i~~~~~~~~~--~~~~~~~~~~~~~~l~sg~~--dg~I~iwd~~t~~~~~~~~~h~~-~I~~l~~sp~~~~l~s~s~ 390 (531)
.+.+.++..+... .-+.+.++ +.++++.+. ++.|.++|+.+++.+..+..... ....+++. .++.+++.-.
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~d---g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~~ 84 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAEN---DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVWL 84 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECST---TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEETT
T ss_pred ceEEEEEECCCCCCcccEEEeCC---CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEec
Confidence 3566677666543 44555442 345555443 68999999999999988764322 22345665 2344555556
Q ss_pred CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcC
Q 009597 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP 470 (531)
Q Consensus 391 Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp 470 (531)
++.+.++|..+.+.+..+..+ ... ...++++++.++++..++.|.++|..+...+..+..-.....-..++.+.|.
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQ-MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECC-SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred CCEEEEEECCCCcEEEEEECC-CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 889999999999998888654 122 2445667887777777899999999887655544432211111235667787
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEeeccC-------------CcEEEEEEecCCCCEEEEEeCCCCEEe
Q 009597 471 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE-------------GVCIGCEWHPLEQSKVATCGWDGLIKY 529 (531)
Q Consensus 471 dg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~-------------~~V~~v~~~p~~~~~l~t~s~Dg~I~i 529 (531)
+|...+....++.|.+.|..+++.+..+.... ....+++|+|.+..+++|+...+.|.+
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~ 232 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFE 232 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEE
Confidence 77655555567899999999999999987421 356899999966678888877777654
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.99 E-value=7.8e-08 Score=105.60 Aligned_cols=254 Identities=13% Similarity=0.138 Sum_probs=163.2
Q ss_pred CCCCceeeeeecccCeeeEEecCc--cCceEEEEEcc---CCCEEEEEe------cCCeEEEEeCCCCcEEEEccCCC--
Q 009597 260 GEKGEHVEDKSTFHGKCMRTYMGH--SKAVRDISFCN---DGTKFLTAS------YDKNIKYWDTETGQVIRTFSTGK-- 326 (531)
Q Consensus 260 ~~~~~~i~~~~~~~~~~~~~l~gH--~~~V~~l~fsp---dg~~l~s~s------~Dg~I~vWd~~t~~~i~~~~~~~-- 326 (531)
+..++.+..++..+|+.+..+... ......+..+| ++. ++.++ .++.|+.||..+|+.+..+....
T Consensus 127 ~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~ 205 (689)
T 1yiq_A 127 GVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGD 205 (689)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCC
T ss_pred EccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCC
Confidence 445678888999999998877642 11111112222 454 44443 37899999999999988775311
Q ss_pred cc------------------------------eEEEEccCCCCCcEEEEeeCCCe-------------------EEEEEC
Q 009597 327 IP------------------------------YVVKLNPDDDKQNILLAGMSDKK-------------------IVQWDM 357 (531)
Q Consensus 327 ~~------------------------------~~~~~~~~~~~~~~l~sg~~dg~-------------------I~iwd~ 357 (531)
.. ....+.+ ...+++.+..++. |..+|.
T Consensus 206 p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~---~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~ 282 (689)
T 1yiq_A 206 PKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP---ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNA 282 (689)
T ss_dssp TTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET---TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEET
T ss_pred cccccccccccccccccCCceeeecCCCCccccceeEcC---CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEc
Confidence 00 0122322 2357788877763 999999
Q ss_pred CCCceeEEEcc--cC-------CCeeEEEEecCCC---EEEEEeCCCCEEEEEcCCCeEEEEeeCCCC------------
Q 009597 358 NTKEITQEYDQ--HL-------GAVNTITFVDSNR---RFVTSSDDKSLRVWEFGIPVVIKYISEPHM------------ 413 (531)
Q Consensus 358 ~t~~~~~~~~~--h~-------~~I~~l~~sp~~~---~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~------------ 413 (531)
.+++.+..+.. |. .++.......+|+ .++.++.+|.++++|..+++.+........
T Consensus 283 ~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~ 362 (689)
T 1yiq_A 283 DTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGR 362 (689)
T ss_dssp TTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTE
T ss_pred cCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCC
Confidence 99999988764 21 1222223333565 788999999999999999987743321110
Q ss_pred --------------------------CCccEEEEeCCCCEEEEEEc----------------------------------
Q 009597 414 --------------------------HSMPSISLHPNTNWLAAQSL---------------------------------- 433 (531)
Q Consensus 414 --------------------------~~v~~v~~sp~~~~l~s~s~---------------------------------- 433 (531)
..-..++++|+..+|++...
T Consensus 363 pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~ 442 (689)
T 1yiq_A 363 PILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEG 442 (689)
T ss_dssp EEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSS
T ss_pred cccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcc
Confidence 01123788998888877643
Q ss_pred -----------CCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccC
Q 009597 434 -----------DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE 502 (531)
Q Consensus 434 -----------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~ 502 (531)
+|.|..||+.+++.+..... ... ...-.++..+.+|++|+.||.|+.||.++|+.+.+++...
T Consensus 443 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~-----~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~ 516 (689)
T 1yiq_A 443 AEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY-VTI-----FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS 516 (689)
T ss_dssp HHHHHHHHTTCEEEEEEEETTTTEEEEEEEE-SSS-----CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cccCCCCCCCcceeEEEEECCCCCeEeEccC-CCC-----ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCC
Confidence 37799999998876544332 111 1112455678899999999999999999999999887554
Q ss_pred CcE-EEEEEecCCCCEEEEEeC
Q 009597 503 GVC-IGCEWHPLEQSKVATCGW 523 (531)
Q Consensus 503 ~~V-~~v~~~p~~~~~l~t~s~ 523 (531)
+.+ .-+.|..++..++++.+.
T Consensus 517 ~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 517 GVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp CCCSCCEEEEETTEEEEEEEEC
T ss_pred CcccCceEEEECCEEEEEEEec
Confidence 322 335566645556665543
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.99 E-value=1.2e-08 Score=102.27 Aligned_cols=224 Identities=11% Similarity=0.098 Sum_probs=139.0
Q ss_pred CceEEEEEccCCCEEEEEec--CCeEEEEeCCCCcEEEEccC------CCcceEEEEccCCCCCcEEEEeeC-----CCe
Q 009597 285 KAVRDISFCNDGTKFLTASY--DKNIKYWDTETGQVIRTFST------GKIPYVVKLNPDDDKQNILLAGMS-----DKK 351 (531)
Q Consensus 285 ~~V~~l~fspdg~~l~s~s~--Dg~I~vWd~~t~~~i~~~~~------~~~~~~~~~~~~~~~~~~l~sg~~-----dg~ 351 (531)
..+..|+++++|+.+++... ++.++||.+.+++. ..+.. .+......+..+.. ++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCCCCe
Confidence 68999999999998888642 34356665555543 33321 11223333333333 345555433 579
Q ss_pred EEEEECCCCceeEEEccc------CCCeeEEEEecCCCE-EEEEe---CCCCEEEEEcCCCeEEEEeeCCCCCCcc-EEE
Q 009597 352 IVQWDMNTKEITQEYDQH------LGAVNTITFVDSNRR-FVTSS---DDKSLRVWEFGIPVVIKYISEPHMHSMP-SIS 420 (531)
Q Consensus 352 I~iwd~~t~~~~~~~~~h------~~~I~~l~~sp~~~~-l~s~s---~Dg~I~iwd~~~~~~~~~~~~~~~~~v~-~v~ 420 (531)
|.+||+.+++.+..+..+ ...++.+++.+++.. +++-+ .++.|.+||+.++.....+. .|..... ...
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~-~~~~~~~~~~~ 173 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ-GYPGIAPEDID 173 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT-TCTTTSCCSCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec-CCCcccccccc
Confidence 999999999887777532 235689999986545 45544 57889999999887665542 2211111 134
Q ss_pred EeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCC-cEEEEECC---CCe---
Q 009597 421 LHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG-KCWFWDWK---SCK--- 493 (531)
Q Consensus 421 ~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg-~I~iwd~~---~~~--- 493 (531)
+.+++..+.+.+.++.+..|. ..+..|+|+|+|+.|+++...+ .|+.++.. .+.
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~-------------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~ 234 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPH-------------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTD 234 (343)
T ss_dssp CEETTEECBEECTTSCEECCC-------------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCH
T ss_pred eeECCEEEEeccCCCceecee-------------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCCh
Confidence 455666666666676664432 1245599999999998887665 55555531 110
Q ss_pred --EEE--EeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 494 --VFR--TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 494 --~~~--~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
... ...++.+....+++++ ++.++++...++.|.+||
T Consensus 235 ~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 235 AELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp HHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEE
T ss_pred hhhhcceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEE
Confidence 000 1113334456789998 678888888888999986
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.98 E-value=1.2e-08 Score=102.98 Aligned_cols=232 Identities=9% Similarity=0.003 Sum_probs=155.9
Q ss_pred CCCceeeeeecccCeeeEEecCc-------cCceEEEEEccCCCEEEEEec--CCeEEE--EeCCCCcEEEEccCCCcce
Q 009597 261 EKGEHVEDKSTFHGKCMRTYMGH-------SKAVRDISFCNDGTKFLTASY--DKNIKY--WDTETGQVIRTFSTGKIPY 329 (531)
Q Consensus 261 ~~~~~i~~~~~~~~~~~~~l~gH-------~~~V~~l~fspdg~~l~s~s~--Dg~I~v--Wd~~t~~~i~~~~~~~~~~ 329 (531)
..++.|.+++..+++.+.++.-+ ......++|+|||++|+++.. +..|.+ +|+.+ +.++.....
T Consensus 93 ~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~-- 167 (368)
T 1mda_H 93 KRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC-- 167 (368)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC--
T ss_pred CCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc--
Confidence 45678999999999999998643 134678999999999998875 457888 99877 555544322
Q ss_pred EEEEccCCCCCcEEEEeeCCCeEEEEECCC-----CceeEE----EcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcC
Q 009597 330 VVKLNPDDDKQNILLAGMSDKKIVQWDMNT-----KEITQE----YDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG 400 (531)
Q Consensus 330 ~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t-----~~~~~~----~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~ 400 (531)
..+.+. ....+++.+.||.+.+.|+.+ ++.+.. +.....+. . .+++..++..+. +.|.+.|+.
T Consensus 168 -~~~~p~--g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~ 239 (368)
T 1mda_H 168 -FHIHPG--AAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIP 239 (368)
T ss_dssp -CCCEEE--ETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECC
T ss_pred -eEEccC--CCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECC
Confidence 112232 335677778899999999886 433211 11122333 3 666777666666 999999986
Q ss_pred CC--eEEEEeeCC---------CCCCccEEEEeCCCCEEEEEEc-C--------CeEEEEEcCCcceeceeeeecCCccc
Q 009597 401 IP--VVIKYISEP---------HMHSMPSISLHPNTNWLAAQSL-D--------NQILIYSTRERFQLNKKKRFAGHIVA 460 (531)
Q Consensus 401 ~~--~~~~~~~~~---------~~~~v~~v~~sp~~~~l~s~s~-D--------g~I~iwd~~~~~~~~~~~~~~~~~~~ 460 (531)
.. ..+..+... .......++++|+++.++++.. . +.+.++|+.+.+.+..+.. .
T Consensus 240 ~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v------g 313 (368)
T 1mda_H 240 AAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN------G 313 (368)
T ss_dssp SSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE------E
T ss_pred CCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC------C
Confidence 53 233222110 0112333789999998887654 2 3567999998866544432 1
Q ss_pred cceEEEEEcCCCC-EEEEEe-CCCcEEEEECCCCeEEEEeeccCCcEEEEEEec
Q 009597 461 GYACQVNFSPDGR-FVMSGD-GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 512 (531)
Q Consensus 461 ~~v~~l~~spdg~-~l~sgs-~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p 512 (531)
.....+.|+|||+ ++++.. .++.|.++|+.+++.+.++.....+ ..+++++
T Consensus 314 ~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P-~~i~~~~ 366 (368)
T 1mda_H 314 HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP-ESLSVQN 366 (368)
T ss_dssp EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCC-CEEECCC
T ss_pred CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCC-CEEEeec
Confidence 2356699999998 455566 5899999999999999999866554 4666554
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.97 E-value=8.8e-08 Score=90.85 Aligned_cols=199 Identities=9% Similarity=0.089 Sum_probs=140.8
Q ss_pred CeeeEEecCccCc--eEEEEEccCCCEEEEEecCC--eEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCC
Q 009597 274 GKCMRTYMGHSKA--VRDISFCNDGTKFLTASYDK--NIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 349 (531)
Q Consensus 274 ~~~~~~l~gH~~~--V~~l~fspdg~~l~s~s~Dg--~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 349 (531)
-+.+++|. |... ...|.|+ ++.++.+.+.+| .|+++|+++++.+..+..........+.... ..+.++.-.+
T Consensus 31 ~~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g--~~ly~ltw~~ 106 (262)
T 3nol_A 31 YQIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWK--DKIVGLTWKN 106 (262)
T ss_dssp EEEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEET--TEEEEEESSS
T ss_pred eEEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeC--CEEEEEEeeC
Confidence 45677774 5544 4889998 677777877766 8999999999999998776655444444433 3667777779
Q ss_pred CeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCC-CCC---ccEEEEeCCC
Q 009597 350 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH-MHS---MPSISLHPNT 425 (531)
Q Consensus 350 g~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~-~~~---v~~v~~sp~~ 425 (531)
+.+.+||..+.+.+.++.... .-..+ +++++.|+.+..++.|.++|..+.+.+..+.... ..+ +..+.|. +|
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~-eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDG-EGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSS-CCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECccCcEEEEEECCC-CceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 999999999999999987533 22333 3567777777667889999999988888776422 222 3456776 67
Q ss_pred CEEEEEEcCCeEEEEEcCCcceeceeeee--c-----CCccccceEEEEEcCCCCEEEEEeC
Q 009597 426 NWLAAQSLDNQILIYSTRERFQLNKKKRF--A-----GHIVAGYACQVNFSPDGRFVMSGDG 480 (531)
Q Consensus 426 ~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~--~-----~~~~~~~v~~l~~spdg~~l~sgs~ 480 (531)
.+++..-.++.|.+.|..++..+..+..- . .+......+.|+|+|+++.|++.+.
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 66655557889999999998766544321 1 1111234678999998877776664
No 232
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.96 E-value=1.4e-07 Score=92.70 Aligned_cols=215 Identities=10% Similarity=0.097 Sum_probs=136.3
Q ss_pred cCCCCCCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccC--C---CcceE
Q 009597 256 GNAGGEKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--G---KIPYV 330 (531)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~--~---~~~~~ 330 (531)
+...+..++.+..|+. .++ +..+..+...+.+++++++|+++++...++.|.+|+.. ++....... . ..+..
T Consensus 59 l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~ 135 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPND 135 (305)
T ss_dssp EEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCC
T ss_pred EEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCC
Confidence 4444555667777766 444 45566677789999999999866555556789999986 554322211 1 11233
Q ss_pred EEEccCCCCCcEEEE----eeC-------------CCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCC--
Q 009597 331 VKLNPDDDKQNILLA----GMS-------------DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDD-- 391 (531)
Q Consensus 331 ~~~~~~~~~~~~l~s----g~~-------------dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~D-- 391 (531)
+.+.+ .+.++++ |.. .+.|..||..+++..... .....+.++|+|+++.|+.+...
T Consensus 136 i~~d~---dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~ 210 (305)
T 3dr2_A 136 LIVAR---DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQ 210 (305)
T ss_dssp EEECT---TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC-
T ss_pred EEECC---CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCc
Confidence 44444 3356665 432 357888888777655443 44567899999999987777665
Q ss_pred ----CCEEEEEcCCCeE--EEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEE
Q 009597 392 ----KSLRVWEFGIPVV--IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 465 (531)
Q Consensus 392 ----g~I~iwd~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 465 (531)
+.|.+|++..... ...+..........++++++|++.++ +. +.|.+|+.. +..+.. +.... .+.+
T Consensus 211 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~-~gv~~~~~~-g~~~~~---~~~~~---~~~~ 281 (305)
T 3dr2_A 211 GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SG-TGVCVFDSD-GQLLGH---IPTPG---TASN 281 (305)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CS-SEEEEECTT-SCEEEE---EECSS---CCCE
T ss_pred CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cC-CcEEEECCC-CCEEEE---EECCC---ceeE
Confidence 6899999876541 12222223345668999999995554 44 459999984 333322 22221 2566
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEE
Q 009597 466 VNFSPDGRFVMSGDGEGKCWFWD 488 (531)
Q Consensus 466 l~~spdg~~l~sgs~dg~I~iwd 488 (531)
++|+++++.|+.++.++ |+.++
T Consensus 282 ~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 282 CTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp EEECTTSCEEEEEETTE-EEEEE
T ss_pred EEEeCCCCEEEEEcCCe-EEEEE
Confidence 89999999888887764 44333
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.95 E-value=1.8e-07 Score=102.42 Aligned_cols=251 Identities=12% Similarity=0.106 Sum_probs=163.7
Q ss_pred CCCCceeeeeecccCeeeEEecCc-c----CceEEEEEccCCCEEEEEec------CCeEEEEeCCCCcEEEEccCCCcc
Q 009597 260 GEKGEHVEDKSTFHGKCMRTYMGH-S----KAVRDISFCNDGTKFLTASY------DKNIKYWDTETGQVIRTFSTGKIP 328 (531)
Q Consensus 260 ~~~~~~i~~~~~~~~~~~~~l~gH-~----~~V~~l~fspdg~~l~s~s~------Dg~I~vWd~~t~~~i~~~~~~~~~ 328 (531)
+..++.+..++..+|+.+..+..+ . ..+.+--.-.++ .++.++. ++.|+.+|..+|+.+..+......
T Consensus 134 ~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~ 212 (677)
T 1kb0_A 134 GAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGD 212 (677)
T ss_dssp ECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCC
T ss_pred EcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCC
Confidence 345678888999999999888765 2 122211111134 4555543 799999999999999887543221
Q ss_pred ---------------------------------eEEEEccCCCCCcEEEEeeCCC-------------------eEEEEE
Q 009597 329 ---------------------------------YVVKLNPDDDKQNILLAGMSDK-------------------KIVQWD 356 (531)
Q Consensus 329 ---------------------------------~~~~~~~~~~~~~~l~sg~~dg-------------------~I~iwd 356 (531)
....+.+ ...+++.+..++ .|..+|
T Consensus 213 ~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~---~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD 289 (677)
T 1kb0_A 213 PSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA---ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALD 289 (677)
T ss_dssp TTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET---TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred ccccccccccccccccccccCceeEeCCCcccccceeEcC---CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEE
Confidence 0122222 235677766554 599999
Q ss_pred CCCCceeEEEcc--cC-------CCeeEEEEecCC---CEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCC----------
Q 009597 357 MNTKEITQEYDQ--HL-------GAVNTITFVDSN---RRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH---------- 414 (531)
Q Consensus 357 ~~t~~~~~~~~~--h~-------~~I~~l~~sp~~---~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~---------- 414 (531)
..+++.+..+.. |. .....+....+| ..++.++.+|.|+++|..+++.+..+......
T Consensus 290 ~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~ 369 (677)
T 1kb0_A 290 PDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGK 369 (677)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSC
T ss_pred CCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCc
Confidence 999999888754 21 112223333467 67899999999999999999887665421100
Q ss_pred ------------------------CccEEEEeCCCCEEEEEEcC------------------------------------
Q 009597 415 ------------------------SMPSISLHPNTNWLAAQSLD------------------------------------ 434 (531)
Q Consensus 415 ------------------------~v~~v~~sp~~~~l~s~s~D------------------------------------ 434 (531)
.-..++++|+..++++...+
T Consensus 370 ~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~ 449 (677)
T 1kb0_A 370 PIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAE 449 (677)
T ss_dssp EEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSS
T ss_pred eeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccc
Confidence 01257889988888876542
Q ss_pred -------CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCC-cEE
Q 009597 435 -------NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG-VCI 506 (531)
Q Consensus 435 -------g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~-~V~ 506 (531)
|.|..||+.+++.+..... ... +....+...+.++++++.+|.+++||.++++.+.++....+ .-.
T Consensus 450 ~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~-----~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~ 523 (677)
T 1kb0_A 450 PPKSKPFGRLLAWDPVAQKAAWSVEH-VSP-----WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAA 523 (677)
T ss_dssp CCCSCCEEEEEEEETTTTEEEEEEEE-SSS-----CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred cCCCCCccEEEEEeCCCCcEEeecCC-CCC-----CcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccC
Confidence 7899999998876644432 111 22234566788899999999999999999999999975442 222
Q ss_pred EEEEecCCCCEEEE
Q 009597 507 GCEWHPLEQSKVAT 520 (531)
Q Consensus 507 ~v~~~p~~~~~l~t 520 (531)
-+.|..++..+++.
T Consensus 524 p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 524 PSTYMVDGRQYVSV 537 (677)
T ss_dssp CEEEEETTEEEEEE
T ss_pred CEEEEeCCEEEEEE
Confidence 34555634445444
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.94 E-value=2.4e-07 Score=87.81 Aligned_cols=196 Identities=11% Similarity=0.035 Sum_probs=133.9
Q ss_pred cEEEEccCCCcceEEEEccCCCCCcEEEEeeCCC--eEEEEECCCCceeEEEcccCCCeeE--EEEecCCCEEEEEeCCC
Q 009597 317 QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK--KIVQWDMNTKEITQEYDQHLGAVNT--ITFVDSNRRFVTSSDDK 392 (531)
Q Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg--~I~iwd~~t~~~~~~~~~h~~~I~~--l~~sp~~~~l~s~s~Dg 392 (531)
+.+.++.+......-.+.+.+ +.++.+++.+| .|+++|+.+++.+..+.... .... +++. .++.+++.-.++
T Consensus 32 ~vv~~~phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~-g~~ly~ltw~~~ 107 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYRN--GYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDW-KDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEET--TEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEE-TTEEEEEESSSS
T ss_pred EEEEEecCCCCcccceEEEEC--CEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEe-CCEEEEEEeeCC
Confidence 466777776666555454442 36777777766 99999999999999886543 3333 4443 233444555688
Q ss_pred CEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCC
Q 009597 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG 472 (531)
Q Consensus 393 ~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg 472 (531)
.+.+||..+.+.+..+..+. ....+.+++..|+....++.|.++|..+...+..+........-..++.+.|. +|
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDG----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp EEEEEETTTCCEEEEEECSS----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEEECccCcEEEEEECCC----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 99999999999998887532 22333456777777666788999999887666554443211111334556776 67
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEeecc------------CCcEEEEEEecCCCCEEEEE
Q 009597 473 RFVMSGDGEGKCWFWDWKSCKVFRTLKCH------------EGVCIGCEWHPLEQSKVATC 521 (531)
Q Consensus 473 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~h------------~~~V~~v~~~p~~~~~l~t~ 521 (531)
+..+..-.+..|.+.|..+++.+..+... ....++++|+|....+++||
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 66655557889999999999999988642 13568999999666566665
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.93 E-value=2.6e-07 Score=87.64 Aligned_cols=196 Identities=9% Similarity=-0.013 Sum_probs=138.6
Q ss_pred cEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeE--EEEecCCCEEEEEeCCCCE
Q 009597 317 QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNT--ITFVDSNRRFVTSSDDKSL 394 (531)
Q Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~--l~~sp~~~~l~s~s~Dg~I 394 (531)
+.+.++.+........+.+.. +.++++.+.+|.|+++|+.+++.+..+ .. ..... +++. .++.+++.-.++.+
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~-g~~Ly~ltw~~~~v 118 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASD-GERLYQLTWTEGLL 118 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEEC-SSCEEEEESSSCEE
T ss_pred EEEEEEcCCCccccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEe-CCEEEEEEccCCEE
Confidence 556777666666544444443 478888889999999999999998887 33 33333 5554 34555666678999
Q ss_pred EEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCE
Q 009597 395 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRF 474 (531)
Q Consensus 395 ~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~ 474 (531)
.+||..+.+.+..+..+.. -..++ ++++.|+.+..++.|.++|..+...+..+........-..++.+.|. +|+.
T Consensus 119 ~V~D~~Tl~~~~ti~~~~e--GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYSGE--GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI 193 (268)
T ss_dssp EEEETTTTEEEEEEECSSC--CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEECCcCcEEEEEeCCCc--eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE
Confidence 9999999999998875322 23444 56788888777899999999887666555443322222345667776 7765
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEeecc-------------CCcEEEEEEecCCCCEEEEEe
Q 009597 475 VMSGDGEGKCWFWDWKSCKVFRTLKCH-------------EGVCIGCEWHPLEQSKVATCG 522 (531)
Q Consensus 475 l~sgs~dg~I~iwd~~~~~~~~~~~~h-------------~~~V~~v~~~p~~~~~l~t~s 522 (531)
.+..-.+..|.+.|..+++.+..+... ....++++|+|...++++||-
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 555556789999999999999888642 136789999997777777763
No 236
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.93 E-value=1.4e-10 Score=117.70 Aligned_cols=177 Identities=12% Similarity=0.027 Sum_probs=101.4
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCcc-EE
Q 009597 341 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP-SI 419 (531)
Q Consensus 341 ~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~-~v 419 (531)
..+++++.||.|+.||..+++.+..+.. +.+.+..+..++..+++++.|+.|+.||..+++.+..........+. +.
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp 87 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP 87 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc
Confidence 5789999999999999999999988876 56666666677878888889999999999887665444221111111 11
Q ss_pred EEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009597 420 SLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499 (531)
Q Consensus 420 ~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~ 499 (531)
.+. .+..+++++.++.|+.||..++..+.... .+. ...++|++..|++++.++.|+.||.++++.+..+.
T Consensus 88 ~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~---~~~------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 88 CRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLS---SAF------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp CC------CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred eEe-cCCEEEEEeCCCEEEEEECCCCcEEEEec---CCC------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 111 34567888899999999999886654332 221 13456788899999999999999999998776654
Q ss_pred ccCCcEEEEEEecCC--CCEEEEEeCCCCEEeeC
Q 009597 500 CHEGVCIGCEWHPLE--QSKVATCGWDGLIKYWD 531 (531)
Q Consensus 500 ~h~~~V~~v~~~p~~--~~~l~t~s~Dg~I~iWD 531 (531)
.+. ....++.+.. ...+++++.||.|+.||
T Consensus 158 ~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d 189 (369)
T 2hz6_A 158 YFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVD 189 (369)
T ss_dssp EEE--ECCBCCCCCTTCCCCEEEEETSCEEEEEC
T ss_pred ccc--ccCccccCCccccceEEEECCCCEEEEEE
Confidence 321 1122233211 14577788899999887
No 237
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.90 E-value=6.2e-07 Score=91.42 Aligned_cols=220 Identities=14% Similarity=0.128 Sum_probs=145.8
Q ss_pred cCCCCCCCceeeeeecccC----eeeEEec------C-ccCceEEEEEccCCCEEEEEecC------CeEEEEeCCCCcE
Q 009597 256 GNAGGEKGEHVEDKSTFHG----KCMRTYM------G-HSKAVRDISFCNDGTKFLTASYD------KNIKYWDTETGQV 318 (531)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~----~~~~~l~------g-H~~~V~~l~fspdg~~l~s~s~D------g~I~vWd~~t~~~ 318 (531)
+...+..+..|.+.++.+. +.++++. . -...-..+..+|+| +++++..+ +.|.+.|.++++.
T Consensus 98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP 176 (462)
T ss_dssp EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE
T ss_pred EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE
Confidence 4455666778888876544 6777773 1 12245678889999 77777666 7899999999999
Q ss_pred EEEccCCCc----ceEEEEccCCCCCcEEEEee-------------------CCCeEEEEECCCCceeEEEcccC--CCe
Q 009597 319 IRTFSTGKI----PYVVKLNPDDDKQNILLAGM-------------------SDKKIVQWDMNTKEITQEYDQHL--GAV 373 (531)
Q Consensus 319 i~~~~~~~~----~~~~~~~~~~~~~~~l~sg~-------------------~dg~I~iwd~~t~~~~~~~~~h~--~~I 373 (531)
+.++..+.. .+.+.+++.. +.+++.. ...+|.+||+.+++.++++.... ...
T Consensus 177 ~~~~~~~~~~~~~~Yd~~~~p~~---~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P 253 (462)
T 2ece_A 177 LGKWEIDRGDQYLAYDFWWNLPN---EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMA 253 (462)
T ss_dssp EEECCSBCTTCCCCCCEEEETTT---TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEE
T ss_pred EEEEccCCCCccccceEEECCCC---CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCcc
Confidence 999975432 2334445533 4566663 47899999999998888886531 234
Q ss_pred eEEEE--ecCCCEEEEEe------CCCCEEEEEcCCCeE--EEEeeCCC-----------------CCCccEEEEeCCCC
Q 009597 374 NTITF--VDSNRRFVTSS------DDKSLRVWEFGIPVV--IKYISEPH-----------------MHSMPSISLHPNTN 426 (531)
Q Consensus 374 ~~l~~--sp~~~~l~s~s------~Dg~I~iwd~~~~~~--~~~~~~~~-----------------~~~v~~v~~sp~~~ 426 (531)
..|.| +|+++++.+++ .+++|.+|....+.. .+.+..+. ......+.++|+++
T Consensus 254 ~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGr 333 (462)
T 2ece_A 254 LELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDK 333 (462)
T ss_dssp EEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSC
T ss_pred ceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCC
Confidence 45656 99999877766 466888877655421 11110000 23477899999999
Q ss_pred EEEEEEc-CCeEEEEEcCCcceeceeeee-cC-----------CccccceEEEEEcCCCCEEEEEe
Q 009597 427 WLAAQSL-DNQILIYSTRERFQLNKKKRF-AG-----------HIVAGYACQVNFSPDGRFVMSGD 479 (531)
Q Consensus 427 ~l~s~s~-Dg~I~iwd~~~~~~~~~~~~~-~~-----------~~~~~~v~~l~~spdg~~l~sgs 479 (531)
+|.++.. .+.|.+||+............ .+ ....+....+.++|||++|+++.
T Consensus 334 fLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 334 FLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9988876 579999998643222212111 11 11112345699999999999988
No 238
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.90 E-value=6.9e-07 Score=88.64 Aligned_cols=180 Identities=12% Similarity=0.059 Sum_probs=119.8
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCC---CCCC
Q 009597 339 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEP---HMHS 415 (531)
Q Consensus 339 ~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~---~~~~ 415 (531)
.+.++++...++.|..||..+++.. .+. ....+.++.|++++++++++ .++ |.+||..++......... ....
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~g-l~~~d~~~g~~~~~~~~~~~~~~~~ 135 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DDG-LFLRDTATGVLTLHAELESDLPGNR 135 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TTE-EEEEETTTCCEEEEECSSTTCTTEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CCC-EEEEECCCCcEEEEeeCCCCCCCCC
Confidence 4467888888899999999887643 333 34679999999999877654 444 999999887654332211 1235
Q ss_pred ccEEEEeCCCCEEEEEEc------CCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEE-eCCCcEEEEE
Q 009597 416 MPSISLHPNTNWLAAQSL------DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG-DGEGKCWFWD 488 (531)
Q Consensus 416 v~~v~~sp~~~~l~s~s~------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sg-s~dg~I~iwd 488 (531)
+..++++|+|+++++... .+.|..++ ++. +..+ ... ......++|+|+|+.|+.+ +.++.|++||
T Consensus 136 ~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~-~~~~---~~~--~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d 207 (326)
T 2ghs_A 136 SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK-VTKL---FAD--ISIPNSICFSPDGTTGYFVDTKVNRLMRVP 207 (326)
T ss_dssp EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE-EEEE---EEE--ESSEEEEEECTTSCEEEEEETTTCEEEEEE
T ss_pred CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc-EEEe---eCC--CcccCCeEEcCCCCEEEEEECCCCEEEEEE
Confidence 788999999997765543 24566666 332 2111 111 1235679999999877555 4578999999
Q ss_pred CC--CC-e-----EEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 489 WK--SC-K-----VFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 489 ~~--~~-~-----~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+. ++ . .+..+......+.++++.+ ++.+.++...++.|.+||
T Consensus 208 ~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 208 LDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp BCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEEC
T ss_pred cccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEEC
Confidence 86 55 3 2333333445678899988 666666665667788876
No 239
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.88 E-value=4.8e-07 Score=85.01 Aligned_cols=199 Identities=10% Similarity=0.074 Sum_probs=139.7
Q ss_pred CeeeEEecCccC--ceEEEEEccCCCEEEEEecCC--eEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCC
Q 009597 274 GKCMRTYMGHSK--AVRDISFCNDGTKFLTASYDK--NIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 349 (531)
Q Consensus 274 ~~~~~~l~gH~~--~V~~l~fspdg~~l~s~s~Dg--~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 349 (531)
-+.+++| .|.. -...|.|++ +.++.+.+.+| .|+++|+.+++.+..+..........+.... +.+++....+
T Consensus 9 ~~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~--~~ly~ltw~~ 84 (243)
T 3mbr_X 9 YRVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR--DRLIQLTWRN 84 (243)
T ss_dssp EEEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEESSS
T ss_pred eEEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC--CEEEEEEeeC
Confidence 3567777 4654 466899986 66666777654 8999999999999998776665444444433 3677777889
Q ss_pred CeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCC-C---CCccEEEEeCCC
Q 009597 350 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH-M---HSMPSISLHPNT 425 (531)
Q Consensus 350 g~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~-~---~~v~~v~~sp~~ 425 (531)
+.+.+||..+.+.+.++.... .-..++ +++..|+.+..++.|.++|..+.+.+..+.... . ..+..+.+. +|
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G 160 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG 160 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC
Confidence 999999999999999987543 234454 467777776778899999999998887776421 1 234456655 66
Q ss_pred CEEEEEEcCCeEEEEEcCCcceeceeeeecC--------CccccceEEEEEcCCCCEEEEEeC
Q 009597 426 NWLAAQSLDNQILIYSTRERFQLNKKKRFAG--------HIVAGYACQVNFSPDGRFVMSGDG 480 (531)
Q Consensus 426 ~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~--------~~~~~~v~~l~~spdg~~l~sgs~ 480 (531)
..++..-.++.|.+.|..++..+..+..-.. +......+.|+++|+++.|++.+.
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 6665555688999999999876654432110 112345788999998776666554
No 240
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.87 E-value=1.2e-06 Score=82.42 Aligned_cols=197 Identities=12% Similarity=0.030 Sum_probs=133.2
Q ss_pred cEEEEccCCCcceEEEEccCCCCCcEEEEeeCC--CeEEEEECCCCceeEEEcccCCCe-eEEEEecCCCEEEEEeCCCC
Q 009597 317 QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD--KKIVQWDMNTKEITQEYDQHLGAV-NTITFVDSNRRFVTSSDDKS 393 (531)
Q Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d--g~I~iwd~~t~~~~~~~~~h~~~I-~~l~~sp~~~~l~s~s~Dg~ 393 (531)
+.+.++.+......--+.+++ +.++.+++.. ..|+.+|+.+++.+..+....... -.+++. .++.++..-.++.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSE
T ss_pred EEEEEcCCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCE
Confidence 456666655555544444443 3567776665 499999999999998886543321 234444 3445555667899
Q ss_pred EEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCC
Q 009597 394 LRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 473 (531)
Q Consensus 394 I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~ 473 (531)
+.+||..+.+.+..+..+.. -..+ .+++..|+++..++.|.++|..+...+..+..-.....-..++.+.+. +|+
T Consensus 87 v~v~D~~tl~~~~ti~~~~~--Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGE--GWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp EEEEETTTTEEEEEEECSSC--CCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEECCcCcEEEEEeCCCC--ceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE
Confidence 99999999999998875432 2344 456777777777899999999887666555443222112335556665 666
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEeecc-------------CCcEEEEEEecCCCCEEEEE
Q 009597 474 FVMSGDGEGKCWFWDWKSCKVFRTLKCH-------------EGVCIGCEWHPLEQSKVATC 521 (531)
Q Consensus 474 ~l~sgs~dg~I~iwd~~~~~~~~~~~~h-------------~~~V~~v~~~p~~~~~l~t~ 521 (531)
..+..-.+..|.+.|.++++.+..+... ....++++|+|...++++||
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 5555556779999999999999988632 13678999999666666665
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.85 E-value=2.7e-07 Score=90.96 Aligned_cols=240 Identities=9% Similarity=0.035 Sum_probs=150.9
Q ss_pred eeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcc-eEEEEccCCCCCcEEE
Q 009597 266 VEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP-YVVKLNPDDDKQNILL 344 (531)
Q Consensus 266 i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~-~~~~~~~~~~~~~~l~ 344 (531)
+..++. +++.+..+..+...+....+. +..|+.++.++.|..+|.. ++.+..+...... ....... . ..++
T Consensus 80 l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~---~-g~l~ 151 (330)
T 3hxj_A 80 VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE---D-GTIY 151 (330)
T ss_dssp EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT---T-SCEE
T ss_pred EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC---C-CEEE
Confidence 444443 444444443333333333343 4457888889999999998 7776665443321 1122211 2 3377
Q ss_pred EeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCC
Q 009597 345 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN 424 (531)
Q Consensus 345 sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~ 424 (531)
+++.++.|..+|.. ++.+..+......+.++.+.+++..++.+ +.|..+| .++........ ....+.++...++
T Consensus 152 vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~-~~~~~~~~~~~~~ 225 (330)
T 3hxj_A 152 VGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYA-GYWTVTRPAISED 225 (330)
T ss_dssp EECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECC-SSCCCSCCEECTT
T ss_pred EEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEcc-CCcceeceEECCC
Confidence 78888999999998 88877777666778888887777755544 7899999 66655544432 3456888888887
Q ss_pred CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCc
Q 009597 425 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 504 (531)
Q Consensus 425 ~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~ 504 (531)
+. |.+++.++.|..++. ++..+..... . ...+..+.+.+++ .|..++.+|.|..+|. +++.+..+......
T Consensus 226 g~-l~v~t~~~gl~~~~~-~g~~~~~~~~---~--~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~ 296 (330)
T 3hxj_A 226 GT-IYVTSLDGHLYAINP-DGTEKWRFKT---G--KRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWI 296 (330)
T ss_dssp SC-EEEEETTTEEEEECT-TSCEEEEEEC---S--SCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCC
T ss_pred Ce-EEEEcCCCeEEEECC-CCCEeEEeeC---C--CCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCcc
Confidence 75 566677888888875 3333322221 1 1112224455556 4667888889999995 77777777655556
Q ss_pred EEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 505 CIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 505 V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
+.++...+ ++. |..++.+|.|++.
T Consensus 297 ~~~~~~d~-~g~-l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 297 IATPVIDE-NGT-IYFGTRNGKFYAL 320 (330)
T ss_dssp CSCCEECT-TCC-EEEECTTSCEEEE
T ss_pred ccceEEcC-CCE-EEEEcCCCeEEEE
Confidence 66676666 444 6668889988764
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.84 E-value=1.3e-07 Score=99.77 Aligned_cols=224 Identities=9% Similarity=0.038 Sum_probs=149.6
Q ss_pred cCCCEEEEEec-CCeEEEEeCCCCcEEE--EccCCCcceEEEEccCCCCCcEEEEe------------------eCCCeE
Q 009597 294 NDGTKFLTASY-DKNIKYWDTETGQVIR--TFSTGKIPYVVKLNPDDDKQNILLAG------------------MSDKKI 352 (531)
Q Consensus 294 pdg~~l~s~s~-Dg~I~vWd~~t~~~i~--~~~~~~~~~~~~~~~~~~~~~~l~sg------------------~~dg~I 352 (531)
+||++|..+.. +..|.+.|+.+.++.. .+..+..+..+.+...++. .+++++ -.++.|
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCC-cEEEEecccccccCCCCcccccccccCceE
Confidence 37777666554 5679999999999888 5555566666665322233 345555 335689
Q ss_pred EEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCC--------------------------------------CE
Q 009597 353 VQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK--------------------------------------SL 394 (531)
Q Consensus 353 ~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg--------------------------------------~I 394 (531)
.+.|..+.+.+.++.... ....++++|+|+++++++.+. .|
T Consensus 178 tvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999999999888886533 456788999999998888553 46
Q ss_pred EEEEcCC--CeE-EEEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEEEEEcCCccee-----c-eeeeecCCccccceE
Q 009597 395 RVWEFGI--PVV-IKYISEPHMHSMPSISLHPNTNWLAAQS-LDNQILIYSTRERFQL-----N-KKKRFAGHIVAGYAC 464 (531)
Q Consensus 395 ~iwd~~~--~~~-~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~~~~~~-----~-~~~~~~~~~~~~~v~ 464 (531)
.|.|..+ +.. +..+.. .....++.++|+|+++++++ .+++|.++|+.+.... . .......-.......
T Consensus 257 ~VID~~~~~~~~~~~~Ipv--g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~ 334 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPI--ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL 334 (595)
T ss_dssp EEEECSGGGCCSSEEEEEE--ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE
T ss_pred EEEeCcccCCceeEEEEec--CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcc
Confidence 6777766 433 444432 34667899999999887766 5689999999864210 0 000011112233467
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCC----------CeEEEEeeccCCcEE-----EEEEecCCCCEEEEEe
Q 009597 465 QVNFSPDGRFVMSGDGEGKCWFWDWKS----------CKVFRTLKCHEGVCI-----GCEWHPLEQSKVATCG 522 (531)
Q Consensus 465 ~l~~spdg~~l~sgs~dg~I~iwd~~~----------~~~~~~~~~h~~~V~-----~v~~~p~~~~~l~t~s 522 (531)
.++|+|+|...++.--++.|.+||+.. .+.+.++..|..+-. ++..+| ++.+|+++.
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~-DGk~l~~~N 406 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA-TNDWLVCLS 406 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC-CSSEEEEEE
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC-CCCEEEEcC
Confidence 799999994444566899999999877 677888887765321 113456 666766654
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.83 E-value=6.4e-08 Score=95.43 Aligned_cols=244 Identities=10% Similarity=0.029 Sum_probs=156.5
Q ss_pred CCCceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcc-eEEEEccCCCC
Q 009597 261 EKGEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP-YVVKLNPDDDK 339 (531)
Q Consensus 261 ~~~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~-~~~~~~~~~~~ 339 (531)
..++.+..++ .+++.+..+..+...+.++...+++. |+.++.+ |..+|. +++.+..+...... ....+.
T Consensus 37 t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~----- 106 (330)
T 3hxj_A 37 SSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF----- 106 (330)
T ss_dssp STTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE-----
T ss_pred cCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE-----
Confidence 3445566667 67887777766666778888887775 5555544 888886 66554443322211 111111
Q ss_pred CcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEE
Q 009597 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI 419 (531)
Q Consensus 340 ~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v 419 (531)
...+.+++.++.|..+|.. ++....+..+...+.++...+++. ++.++.++.|..+|.. +........ ....+.++
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~ 182 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKT-NDAITSAA 182 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEec-CCCceeee
Confidence 2467888889999999998 777777766666677777776776 5667778899999998 665555443 34567777
Q ss_pred EEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009597 420 SLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499 (531)
Q Consensus 420 ~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~ 499 (531)
.+.+++.+++.. +.|..+| .++..+.... .. ...+.++...++|.+ ..++.++.|..+| .+++.+..+.
T Consensus 183 ~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~---~~--~~~~~~~~~~~~g~l-~v~t~~~gl~~~~-~~g~~~~~~~ 251 (330)
T 3hxj_A 183 SIGKDGTIYFGS---DKVYAIN-PDGTEKWNFY---AG--YWTVTRPAISEDGTI-YVTSLDGHLYAIN-PDGTEKWRFK 251 (330)
T ss_dssp EECTTCCEEEES---SSEEEEC-TTSCEEEEEC---CS--SCCCSCCEECTTSCE-EEEETTTEEEEEC-TTSCEEEEEE
T ss_pred EEcCCCEEEEEe---CEEEEEC-CCCcEEEEEc---cC--CcceeceEECCCCeE-EEEcCCCeEEEEC-CCCCEeEEee
Confidence 787777755544 8899999 5554332221 11 133555777888754 4566677888887 4666666666
Q ss_pred ccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 500 CHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 500 ~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.....+.++...+ ++ .|..++.+|.|..+|
T Consensus 252 ~~~~~~~~~~~~~-~g-~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 252 TGKRIESSPVIGN-TD-TIYFGSYDGHLYAIN 281 (330)
T ss_dssp CSSCCCSCCEECT-TS-CEEEECTTCEEEEEC
T ss_pred CCCCccccceEcC-CC-eEEEecCCCCEEEEC
Confidence 4444444455544 33 566777787777765
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.82 E-value=4.9e-07 Score=85.71 Aligned_cols=197 Identities=11% Similarity=0.071 Sum_probs=138.7
Q ss_pred CeeeEEecCccCc--eEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCe
Q 009597 274 GKCMRTYMGHSKA--VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 351 (531)
Q Consensus 274 ~~~~~~l~gH~~~--V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 351 (531)
.+.+++|. |... ...|.|+ ++.++++.+.+|.|+++|+++++.+..+ .........+.... ..++++...++.
T Consensus 43 ~~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g--~~Ly~ltw~~~~ 117 (268)
T 3nok_A 43 AHIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG--ERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS--SCEEEEESSSCE
T ss_pred eEEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC--CEEEEEEccCCE
Confidence 35677774 5443 4789997 4677778888899999999999999888 55554443344443 367777788999
Q ss_pred EEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCC-C---CCccEEEEeCCCCE
Q 009597 352 IVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH-M---HSMPSISLHPNTNW 427 (531)
Q Consensus 352 I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~-~---~~v~~v~~sp~~~~ 427 (531)
+.+||..+.+.+.++... ..-..++ ++++.|+.+..++.|.++|..+.+.+..+.... . ..+..+.|. +|.+
T Consensus 118 v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI 193 (268)
T ss_dssp EEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE
Confidence 999999999999998753 3234444 467888887778899999999998887776422 1 134556776 6765
Q ss_pred EEEEEcCCeEEEEEcCCcceeceeeeec--------CCccccceEEEEEcCCCCEEEEEe
Q 009597 428 LAAQSLDNQILIYSTRERFQLNKKKRFA--------GHIVAGYACQVNFSPDGRFVMSGD 479 (531)
Q Consensus 428 l~s~s~Dg~I~iwd~~~~~~~~~~~~~~--------~~~~~~~v~~l~~spdg~~l~sgs 479 (531)
++....++.|.+.|..++..+..+..-. ........+.|+++|+++.|++.+
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 5555568899999999987665443210 111224577899999765555444
No 245
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.82 E-value=2.4e-07 Score=101.95 Aligned_cols=233 Identities=14% Similarity=0.158 Sum_probs=146.7
Q ss_pred HHhhhhccCC-----CCCCCceeeeeecccCeeeEEecCccCc--eEEEEEccCCCEEEEEecCC-------------eE
Q 009597 249 AKKKEEKGNA-----GGEKGEHVEDKSTFHGKCMRTYMGHSKA--VRDISFCNDGTKFLTASYDK-------------NI 308 (531)
Q Consensus 249 ~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~~l~gH~~~--V~~l~fspdg~~l~s~s~Dg-------------~I 308 (531)
.++++++.++ +|.+...|++++..+++.+.. +... ...++|+ ||+.|+.++.+. .|
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~---~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET---PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE---EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc---ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEE
Confidence 4567777655 566667899999998886653 2222 3678999 999999888774 39
Q ss_pred EEEeCCCCcE--EEEccCCC--cceEEEEccCCCCCcEEEEeeC---CCeEEEEECCCCc-eeEEEcccCCCeeEEEEec
Q 009597 309 KYWDTETGQV--IRTFSTGK--IPYVVKLNPDDDKQNILLAGMS---DKKIVQWDMNTKE-ITQEYDQHLGAVNTITFVD 380 (531)
Q Consensus 309 ~vWd~~t~~~--i~~~~~~~--~~~~~~~~~~~~~~~~l~sg~~---dg~I~iwd~~t~~-~~~~~~~h~~~I~~l~~sp 380 (531)
++|++.++.. ...+.... ....+...++++...++++... ...|+++|+.++. ....+..+....... |++
T Consensus 211 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~ 289 (693)
T 3iuj_A 211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDN 289 (693)
T ss_dssp EEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEE
T ss_pred EEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Eec
Confidence 9999987652 23332222 2223334444444445555443 3589999998764 455666666666555 566
Q ss_pred CCCEEEEEe-CC---CCEEEEEcCCCeE--EEEeeCCCCCCccEEEEeCCCCEEEEEEcCC---eEEEEEcCCcceecee
Q 009597 381 SNRRFVTSS-DD---KSLRVWEFGIPVV--IKYISEPHMHSMPSISLHPNTNWLAAQSLDN---QILIYSTRERFQLNKK 451 (531)
Q Consensus 381 ~~~~l~s~s-~D---g~I~iwd~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg---~I~iwd~~~~~~~~~~ 451 (531)
++..|+..+ .+ +.|.++|+..+.. ...+.. +...+. .|+++++.|+....++ .|.+|++..+. ...+
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l 365 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP-ERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREV 365 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC-CCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec-CCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEe
Confidence 666555444 33 5799999987643 223322 333443 8889898887776654 68899887542 2111
Q ss_pred eeecCCccccceEEEEEcCCCCEEEEEeCC----CcEEEEECCCCeE
Q 009597 452 KRFAGHIVAGYACQVNFSPDGRFVMSGDGE----GKCWFWDWKSCKV 494 (531)
Q Consensus 452 ~~~~~~~~~~~v~~l~~spdg~~l~sgs~d----g~I~iwd~~~~~~ 494 (531)
.+.+ .+.+..+.+++++..|+....+ +.|+.||+.+++.
T Consensus 366 -~~p~---~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 366 -ALPG---LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp -CCSS---SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred -ecCC---CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 1221 2346667788888777665544 7899999887653
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.78 E-value=2.9e-07 Score=100.70 Aligned_cols=264 Identities=14% Similarity=0.106 Sum_probs=166.6
Q ss_pred CceeeeeecccCeeeEEecCccCc----------e-EEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcc--e
Q 009597 263 GEHVEDKSTFHGKCMRTYMGHSKA----------V-RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--Y 329 (531)
Q Consensus 263 ~~~i~~~~~~~~~~~~~l~gH~~~----------V-~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~--~ 329 (531)
++.+..++..+|+.+.++..+... + ..+.+ .+..++.++.|+.|..+|..+|+.+..+...... .
T Consensus 75 ~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~ 152 (668)
T 1kv9_A 75 WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPY 152 (668)
T ss_dssp GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSC
T ss_pred CCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcc
Confidence 455666777788888777543221 0 12223 2456888889999999999999999887653211 0
Q ss_pred EEEEccCCCCCcEEEEeeC------CCeEEEEECCCCceeEEEcccC-------------------------------CC
Q 009597 330 VVKLNPDDDKQNILLAGMS------DKKIVQWDMNTKEITQEYDQHL-------------------------------GA 372 (531)
Q Consensus 330 ~~~~~~~~~~~~~l~sg~~------dg~I~iwd~~t~~~~~~~~~h~-------------------------------~~ 372 (531)
.+...+.-.. ..++++.. +|.|..+|..+++.+..+.... ..
T Consensus 153 ~~~~~P~v~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~ 231 (668)
T 1kv9_A 153 SITGAPRVVK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTV 231 (668)
T ss_dssp BCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCC
T ss_pred eecCCCEEEC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCcc
Confidence 0000110012 34555543 5899999999999988875311 01
Q ss_pred eeEEEEecCCCEEEEEeCCC-------------------CEEEEEcCCCeEEEEeeCC-CC-------CCccEEEEeCCC
Q 009597 373 VNTITFVDSNRRFVTSSDDK-------------------SLRVWEFGIPVVIKYISEP-HM-------HSMPSISLHPNT 425 (531)
Q Consensus 373 I~~l~~sp~~~~l~s~s~Dg-------------------~I~iwd~~~~~~~~~~~~~-~~-------~~v~~v~~sp~~ 425 (531)
...+++.++..+++.++.++ .|..+|..+++.+-.+... |. .++....+..+|
T Consensus 232 w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 232 WDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp CSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCC
Confidence 12478888888888887766 3999999999887766542 21 122222333356
Q ss_pred C---EEEEEEcCCeEEEEEcCCcceeceeeeec-----------CC--------------------ccccceEEEEEcCC
Q 009597 426 N---WLAAQSLDNQILIYSTRERFQLNKKKRFA-----------GH--------------------IVAGYACQVNFSPD 471 (531)
Q Consensus 426 ~---~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~-----------~~--------------------~~~~~v~~l~~spd 471 (531)
+ .++.++.+|.+.++|..+++.+....... +. .....-..++++|+
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~ 391 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPG 391 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETT
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCC
Confidence 5 68889999999999999887663221100 00 00000012577887
Q ss_pred CCEEEEE------------------------------------eCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCC
Q 009597 472 GRFVMSG------------------------------------DGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 515 (531)
Q Consensus 472 g~~l~sg------------------------------------s~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~ 515 (531)
..++++. ..+|.|..||..+++.+.....+.. +....+.. .+
T Consensus 392 ~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~~~~~t-~g 469 (668)
T 1kv9_A 392 TGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH-WNGGTLST-AG 469 (668)
T ss_dssp TTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEE-TT
T ss_pred CCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC-CcCceeEe-CC
Confidence 6666542 1237899999999999887764432 33334444 45
Q ss_pred CEEEEEeCCCCEEeeC
Q 009597 516 SKVATCGWDGLIKYWD 531 (531)
Q Consensus 516 ~~l~t~s~Dg~I~iWD 531 (531)
.+|+.++.||.|+.||
T Consensus 470 g~vf~g~~dg~l~a~d 485 (668)
T 1kv9_A 470 NLVFQGTAAGQMHAYS 485 (668)
T ss_dssp TEEEEECTTSEEEEEE
T ss_pred CEEEEECCcccchhhh
Confidence 6888889999999986
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.78 E-value=8.2e-07 Score=93.59 Aligned_cols=181 Identities=7% Similarity=0.031 Sum_probs=127.7
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEccc-CCCeeEEEE-e-cCCCEEEEEe------------------CCCCEEEEEc
Q 009597 341 NILLAGMSDKKIVQWDMNTKEITQEYDQH-LGAVNTITF-V-DSNRRFVTSS------------------DDKSLRVWEF 399 (531)
Q Consensus 341 ~~l~sg~~dg~I~iwd~~t~~~~~~~~~h-~~~I~~l~~-s-p~~~~l~s~s------------------~Dg~I~iwd~ 399 (531)
.++++...++.|.+.|+.+.++...+... ...+..+++ . |+++++++++ .++.+.++|.
T Consensus 103 ~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~ 182 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDA 182 (595)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEET
T ss_pred EEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEEC
Confidence 44555556778999999999988855433 245778888 4 8999998885 2457999999
Q ss_pred CCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCC--------------------------------------eEEEEE
Q 009597 400 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN--------------------------------------QILIYS 441 (531)
Q Consensus 400 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg--------------------------------------~I~iwd 441 (531)
.+.+....+.-+. ....++++|+|+++++.+.+. .|.|.|
T Consensus 183 ~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID 260 (595)
T 1fwx_A 183 DKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVD 260 (595)
T ss_dssp TTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEE
T ss_pred CCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEe
Confidence 9998888876432 567788999999999988653 355555
Q ss_pred cCC--cce-eceeeeecCCccccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCe------------EEEEeeccCCcE
Q 009597 442 TRE--RFQ-LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCK------------VFRTLKCHEGVC 505 (531)
Q Consensus 442 ~~~--~~~-~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~------------~~~~~~~h~~~V 505 (531)
.++ +.. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+ .+..+..-. ..
T Consensus 261 ~~~~~~~~~~~~Ipv------g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~-gP 333 (595)
T 1fwx_A 261 GRKEASSLFTRYIPI------ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL-GP 333 (595)
T ss_dssp CSGGGCCSSEEEEEE------ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS-CE
T ss_pred CcccCCceeEEEEec------CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC-Cc
Confidence 554 111 111110 11233489999999888766 67899999998653 444554333 45
Q ss_pred EEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 506 IGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 506 ~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
..++|+| ++...++.-.|+.|.+||
T Consensus 334 ~h~aF~~-dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 334 LHTAFDG-RGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp EEEEECT-TSEEEEEETTTTEEEEEE
T ss_pred ceEEECC-CCeEEEEEecCCcEEEEE
Confidence 8899999 556666777799999996
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.75 E-value=1.6e-05 Score=75.95 Aligned_cols=218 Identities=11% Similarity=0.027 Sum_probs=138.1
Q ss_pred CceEEEEEccCCCEEE-EEecCCeEEEEeCCCCcEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCce
Q 009597 285 KAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI 362 (531)
Q Consensus 285 ~~V~~l~fspdg~~l~-s~s~Dg~I~vWd~~t~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~ 362 (531)
..+.+++|++++..|+ +-...+.|.++++........+... ..+..+.+.+. .+.++++-...+.|.++++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~--~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHL--GRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETT--TTEEEEEETTTTEEEEEETTSCSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEec--CCeEEEEECCCCEEEEEEcCCCCE
Confidence 4578999999655444 5555789999999766544333322 34555666553 346777777788999999875443
Q ss_pred eEEEcccCCCeeEEEEecCCCEEEEEeC---CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEE
Q 009597 363 TQEYDQHLGAVNTITFVDSNRRFVTSSD---DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS-LDNQIL 438 (531)
Q Consensus 363 ~~~~~~h~~~I~~l~~sp~~~~l~s~s~---Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~ 438 (531)
.............++++|++..|+.+.. .+.|..+++..... ..+..........++++|++..|..+. ..+.|.
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 3333323356789999997666555543 36788888764332 222222334577899999876665554 557999
Q ss_pred EEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeEEEEeeccCC-cEEEEEEecC
Q 009597 439 IYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG-DGEGKCWFWDWKSCKVFRTLKCHEG-VCIGCEWHPL 513 (531)
Q Consensus 439 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sg-s~dg~I~iwd~~~~~~~~~~~~h~~-~V~~v~~~p~ 513 (531)
+++......... ..+ ......++.. +..|+.+ ...+.|.++|..+++.+..+..... ....+++.|+
T Consensus 193 ~~~~~g~~~~~~---~~~---~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 193 CLNPAQPGRRKV---LEG---LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp EEETTEEEEEEE---EEC---CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred EEecCCCceEEE---ecC---CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCc
Confidence 999875432211 111 1223446554 4455544 4668999999999999988864432 3567888873
No 249
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.70 E-value=1e-05 Score=79.72 Aligned_cols=239 Identities=12% Similarity=0.101 Sum_probs=147.1
Q ss_pred ecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccC---------------------CCcceEEEEccCCC
Q 009597 280 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST---------------------GKIPYVVKLNPDDD 338 (531)
Q Consensus 280 l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~---------------------~~~~~~~~~~~~~~ 338 (531)
+.+.-....+++|.+++++++++..++.|..|+..++.... +.. ...+..+.+.+ .
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~--~ 90 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL--Q 90 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET--T
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcC--C
Confidence 33333456788999999878888889999999987765432 210 01233444443 1
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEc---c-cCCCeeEEEEec-CCCEEEEEeC-----------------CCCEEE
Q 009597 339 KQNILLAGMSDKKIVQWDMNTKEITQEYD---Q-HLGAVNTITFVD-SNRRFVTSSD-----------------DKSLRV 396 (531)
Q Consensus 339 ~~~~l~sg~~dg~I~iwd~~t~~~~~~~~---~-h~~~I~~l~~sp-~~~~l~s~s~-----------------Dg~I~i 396 (531)
.++ |+++...+.|..+|..++....... + .....+.+++.+ +|+.+++... ++.|..
T Consensus 91 ~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 91 NNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred CCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 233 4455444558888877654322111 1 123578899999 8987776533 367888
Q ss_pred EEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEE-EcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEE
Q 009597 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQ-SLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 475 (531)
Q Consensus 397 wd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~-s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l 475 (531)
||..++....... .......++++|++++|+++ +..+.|.+|++..... .....+.. ..+ ...+++.++|++.
T Consensus 170 ~d~~~~~~~~~~~--~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-~~~~~~~~--~~g-P~gi~~d~~G~l~ 243 (322)
T 2fp8_A 170 YDPSTKETTLLLK--ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-GTAEVLVK--IPN-PGNIKRNADGHFW 243 (322)
T ss_dssp EETTTTEEEEEEE--EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-TCEEEEEE--CSS-EEEEEECTTSCEE
T ss_pred EeCCCCEEEEecc--CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC-CccceEEe--CCC-CCCeEECCCCCEE
Confidence 8887765433322 22345679999999866665 4568999999875321 11111111 112 5668999999877
Q ss_pred EEEeC----------CCcEEEEECCCCeEEEEeeccC----CcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 476 MSGDG----------EGKCWFWDWKSCKVFRTLKCHE----GVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 476 ~sgs~----------dg~I~iwd~~~~~~~~~~~~h~----~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++... .+.|..+|. .++.+..+.... ..+.++++. ++.++++....+.|..++
T Consensus 244 va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 244 VSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEH--DGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp EEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEE--TTEEEEECSSCSEEEEEE
T ss_pred EEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEe--CCEEEEeecCCCceEEEe
Confidence 66544 467888886 477777776432 345666663 555666655666776653
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.68 E-value=2.5e-05 Score=76.42 Aligned_cols=239 Identities=9% Similarity=-0.003 Sum_probs=140.5
Q ss_pred cCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCC--C
Q 009597 273 HGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD--K 350 (531)
Q Consensus 273 ~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d--g 350 (531)
..+.+..|..+ ....+++|+++++++++-..++.|..||... .....+.....+..+.+.++ ++++++.... .
T Consensus 21 ~~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~d---G~l~vad~~~~~~ 95 (306)
T 2p4o_A 21 PAKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSN---GDLVATGWNADSI 95 (306)
T ss_dssp CEEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTT---SCEEEEEECTTSC
T ss_pred CceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCC---CcEEEEeccCCcc
Confidence 34566666543 5678999999998777776789999999865 44444444445555555543 3455554332 2
Q ss_pred eEEEEECCCCceeEEEcc-cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeE-EEEee------C--CCCCCccEEE
Q 009597 351 KIVQWDMNTKEITQEYDQ-HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVV-IKYIS------E--PHMHSMPSIS 420 (531)
Q Consensus 351 ~I~iwd~~t~~~~~~~~~-h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~-~~~~~------~--~~~~~v~~v~ 420 (531)
.|..+|..+++....... .......++..+.+..+++-..++.|.++|...+.. +.... . ........+
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 577788777775433321 122334555555554455544688899999876532 21111 0 011123344
Q ss_pred EeCCCCEEEEEE-cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE--E
Q 009597 421 LHPNTNWLAAQS-LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFR--T 497 (531)
Q Consensus 421 ~sp~~~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~--~ 497 (531)
+|++..|+++. ..+.|.+|++.....+.....+... .....++++++|+++++....+.|.++|.. ++... .
T Consensus 175 -s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~ 249 (306)
T 2p4o_A 175 -KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQ 249 (306)
T ss_dssp -EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEEC
T ss_pred -CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEee
Confidence 78887665554 5679999998641111111111100 123348899999887777778899999975 65532 3
Q ss_pred eeccCCcEEEEEEe---cCCCCEEEEEe
Q 009597 498 LKCHEGVCIGCEWH---PLEQSKVATCG 522 (531)
Q Consensus 498 ~~~h~~~V~~v~~~---p~~~~~l~t~s 522 (531)
+...-....+++|. |+.+.++++..
T Consensus 250 ~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 250 AEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp GGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred cccccCCceEEEEecccCCCCEEEEECC
Confidence 33333467899998 73344444443
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.63 E-value=6e-06 Score=88.72 Aligned_cols=266 Identities=11% Similarity=0.060 Sum_probs=161.8
Q ss_pred Cceeeeeec-ccCeeeEEecCccCc-----------eEEEEEccCCCE----EEEEecCCeEEEEeCCCCcEEEEccCCC
Q 009597 263 GEHVEDKST-FHGKCMRTYMGHSKA-----------VRDISFCNDGTK----FLTASYDKNIKYWDTETGQVIRTFSTGK 326 (531)
Q Consensus 263 ~~~i~~~~~-~~~~~~~~l~gH~~~-----------V~~l~fspdg~~----l~s~s~Dg~I~vWd~~t~~~i~~~~~~~ 326 (531)
++.+...+. .+|+.+.++...... ...++++|.+.. |+.++.|+.|..+|..+|+.+.......
T Consensus 72 ~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~ 151 (599)
T 1w6s_A 72 PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSD 151 (599)
T ss_dssp TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCC
Confidence 456677777 788888777543211 123556443434 8888889999999999999988765433
Q ss_pred cc--eEEEEccCCCCCcEEEEee------CCCeEEEEECCCCceeEEEcccCCC--------------------------
Q 009597 327 IP--YVVKLNPDDDKQNILLAGM------SDKKIVQWDMNTKEITQEYDQHLGA-------------------------- 372 (531)
Q Consensus 327 ~~--~~~~~~~~~~~~~~l~sg~------~dg~I~iwd~~t~~~~~~~~~h~~~-------------------------- 372 (531)
.. ..+...+.-.. ..+++++ .+|.|+.+|..+++.+..+......
T Consensus 152 ~~~~~~~~ssP~v~~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw 230 (599)
T 1w6s_A 152 IKVGSTLTIAPYVVK-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTW 230 (599)
T ss_dssp GGGTCBCCSCCEEET-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTS
T ss_pred CCccceeecCCEEEC-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccC
Confidence 10 00000000011 3456655 3899999999999998877543211
Q ss_pred -----------e-eEEEEecCCCEEEEEeCC----------------CCEEEEEcCCCeEEEEeeCCCCC--------Cc
Q 009597 373 -----------V-NTITFVDSNRRFVTSSDD----------------KSLRVWEFGIPVVIKYISEPHMH--------SM 416 (531)
Q Consensus 373 -----------I-~~l~~sp~~~~l~s~s~D----------------g~I~iwd~~~~~~~~~~~~~~~~--------~v 416 (531)
+ ..+++.+...+++.++.+ +.|..+|.++++.+-.+...+.. ..
T Consensus 231 ~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p 310 (599)
T 1w6s_A 231 EGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVM 310 (599)
T ss_dssp STTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCC
T ss_pred CCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCcc
Confidence 0 135666777777777665 37999999999887666543221 11
Q ss_pred cEEEEe-CCC---CEEEEEEcCCeEEEEEcCCcceeceeeeec------------CC----------------------c
Q 009597 417 PSISLH-PNT---NWLAAQSLDNQILIYSTRERFQLNKKKRFA------------GH----------------------I 458 (531)
Q Consensus 417 ~~v~~s-p~~---~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~------------~~----------------------~ 458 (531)
.-+... .+| ..++.++.+|.+.++|..+++.+.....-. +. .
T Consensus 311 ~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~ 390 (599)
T 1w6s_A 311 MLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAM 390 (599)
T ss_dssp EEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTT
T ss_pred EEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcc
Confidence 112222 467 567778899999999999887664432110 00 0
Q ss_pred cccceEEEEEcCCCCEEEEEe---------------------------------------CCCcEEEEECCCCeEEEEee
Q 009597 459 VAGYACQVNFSPDGRFVMSGD---------------------------------------GEGKCWFWDWKSCKVFRTLK 499 (531)
Q Consensus 459 ~~~~v~~l~~spdg~~l~sgs---------------------------------------~dg~I~iwd~~~~~~~~~~~ 499 (531)
-...-..++++|+..++++.. ..|.|..||+.+++.+-+..
T Consensus 391 Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~ 470 (599)
T 1w6s_A 391 GYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKM 470 (599)
T ss_dssp CSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEE
T ss_pred cccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEec
Confidence 000011256677666554421 34789999999999887765
Q ss_pred ccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 500 CHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 500 ~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.. .++.+-.... .+.+|+.++.||.|+.||
T Consensus 471 ~~-~~~~~g~~~t-agg~vf~gt~dg~l~A~D 500 (599)
T 1w6s_A 471 ER-FAVWGGTMAT-AGDLVFYGTLDGYLKARD 500 (599)
T ss_dssp ES-SCCCSBCEEE-TTTEEEEECTTSEEEEEE
T ss_pred CC-CCccCcceEe-cCCEEEEECCCCeEEEEE
Confidence 22 1111111222 345777788999998876
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.60 E-value=5.9e-06 Score=88.54 Aligned_cols=264 Identities=13% Similarity=0.091 Sum_probs=161.1
Q ss_pred Cceeeeeec-ccCeeeEEecCccC-ce----------EEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcc--
Q 009597 263 GEHVEDKST-FHGKCMRTYMGHSK-AV----------RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP-- 328 (531)
Q Consensus 263 ~~~i~~~~~-~~~~~~~~l~gH~~-~V----------~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~-- 328 (531)
++.+...+. .+|+.+.++..... .+ ..+++ .+..++.++.|+.|..+|..+|+.+..+......
T Consensus 72 ~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~ 149 (571)
T 2ad6_A 72 PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVG 149 (571)
T ss_dssp TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGT
T ss_pred CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCcc
Confidence 456677777 77888777653321 00 11222 3456888888999999999999999877644311
Q ss_pred eEEEEccCCCCCcEEEEeeC------CCeEEEEECCCCceeEEEcccCCC------------------------------
Q 009597 329 YVVKLNPDDDKQNILLAGMS------DKKIVQWDMNTKEITQEYDQHLGA------------------------------ 372 (531)
Q Consensus 329 ~~~~~~~~~~~~~~l~sg~~------dg~I~iwd~~t~~~~~~~~~h~~~------------------------------ 372 (531)
..+...+.-.. ..+++++. ++.|..+|..+++.+..+......
T Consensus 150 ~~~~~~P~v~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~ 228 (571)
T 2ad6_A 150 STLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDA 228 (571)
T ss_dssp CBCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTG
T ss_pred ceeccCCEEEC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccc
Confidence 00000110012 34556554 799999999999998877542211
Q ss_pred --------eeEEEEecCCCEEEEEeCC----------------CCEEEEEcCCCeEEEEeeCCC-CC----CccE---EE
Q 009597 373 --------VNTITFVDSNRRFVTSSDD----------------KSLRVWEFGIPVVIKYISEPH-MH----SMPS---IS 420 (531)
Q Consensus 373 --------I~~l~~sp~~~~l~s~s~D----------------g~I~iwd~~~~~~~~~~~~~~-~~----~v~~---v~ 420 (531)
...+++.+....++.++.+ +.|..+|..+++.+-.+...+ .. .+.. +.
T Consensus 229 ~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~ 308 (571)
T 2ad6_A 229 WKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTD 308 (571)
T ss_dssp GGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEE
T ss_pred eecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEe
Confidence 0235677766677666532 259999999998876665322 11 1111 22
Q ss_pred EeCCCC---EEEEEEcCCeEEEEEcCCcceeceeeeec------------CCcc-----------cc-----------ce
Q 009597 421 LHPNTN---WLAAQSLDNQILIYSTRERFQLNKKKRFA------------GHIV-----------AG-----------YA 463 (531)
Q Consensus 421 ~sp~~~---~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~------------~~~~-----------~~-----------~v 463 (531)
...+|+ .++.++.+|.+.++|..+++.+.....-. +... .. .-
T Consensus 309 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w 388 (571)
T 2ad6_A 309 QPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQ 388 (571)
T ss_dssp EEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCS
T ss_pred cccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCC
Confidence 224673 57778889999999998887654332111 0000 00 00
Q ss_pred EEEEEcCCCCEEEEEe-------------------------------------CCCcEEEEECCCCeEEEEeeccCCcEE
Q 009597 464 CQVNFSPDGRFVMSGD-------------------------------------GEGKCWFWDWKSCKVFRTLKCHEGVCI 506 (531)
Q Consensus 464 ~~l~~spdg~~l~sgs-------------------------------------~dg~I~iwd~~~~~~~~~~~~h~~~V~ 506 (531)
..++++|+..+|++.. .+|.|..||..+++.+.++.... .+.
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~ 467 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAW 467 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCC
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-Ccc
Confidence 1357888877776653 35789999999999888776332 222
Q ss_pred EEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 507 GCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 507 ~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+..... .+.+++.++.||.|+.||
T Consensus 468 ~~~~~t-~gg~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 468 GGTLYT-KGGLVWYATLDGYLKALD 491 (571)
T ss_dssp SBCEEE-TTTEEEEECTTSEEEEEE
T ss_pred ceeEEE-CCCEEEEEcCCCeEEEEE
Confidence 222333 345677788999999886
No 253
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.59 E-value=3e-05 Score=74.10 Aligned_cols=223 Identities=13% Similarity=0.020 Sum_probs=131.3
Q ss_pred CEEEEEecCCeEEEEeCCCCcEE-----EEccC-CCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccC
Q 009597 297 TKFLTASYDKNIKYWDTETGQVI-----RTFST-GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHL 370 (531)
Q Consensus 297 ~~l~s~s~Dg~I~vWd~~t~~~i-----~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~ 370 (531)
.+|+.+.. +.|+.+++...... ..+.. ...+..+.+.+ ..+.++++-...+.|..+++........+....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDC--VDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEET--TTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEec--CCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 44555553 47888887654321 11111 12233444443 344677777778999999998765544444334
Q ss_pred CCeeEEEEecCCCEEE-EEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc---CCeEEEEEcCCcc
Q 009597 371 GAVNTITFVDSNRRFV-TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL---DNQILIYSTRERF 446 (531)
Q Consensus 371 ~~I~~l~~sp~~~~l~-s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~---Dg~I~iwd~~~~~ 446 (531)
.....+++.+++..|+ +-...+.|.++++......... .........++++|++..|..+.. .+.|..+++....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~-~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEE-ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence 5778999999765554 4455678999998754322222 222345678999997666655554 3688888876432
Q ss_pred eeceeeeecCCccccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCC
Q 009597 447 QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 447 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg 525 (531)
. ..+ .... ......+++++++..|+.+. ..+.|.++|.........+... .....++.. ++.++++....+
T Consensus 158 ~-~~~--~~~~--~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-~~P~gi~~d--~~~lyva~~~~~ 229 (267)
T 1npe_A 158 R-RIL--AQDN--LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-QYPFAVTSY--GKNLYYTDWKTN 229 (267)
T ss_dssp C-EEE--ECTT--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-CSEEEEEEE--TTEEEEEETTTT
T ss_pred c-EEE--EECC--CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-CCceEEEEe--CCEEEEEECCCC
Confidence 1 111 1111 13467799999877665554 5678999998765443333322 233566553 444455444556
Q ss_pred CEEeeC
Q 009597 526 LIKYWD 531 (531)
Q Consensus 526 ~I~iWD 531 (531)
.|.++|
T Consensus 230 ~v~~~d 235 (267)
T 1npe_A 230 SVIAMD 235 (267)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 776654
No 254
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.51 E-value=2.2e-05 Score=84.27 Aligned_cols=261 Identities=15% Similarity=0.069 Sum_probs=157.5
Q ss_pred eeeeecccCeeeEEecCccCce---------EEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCc--------c
Q 009597 266 VEDKSTFHGKCMRTYMGHSKAV---------RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI--------P 328 (531)
Q Consensus 266 i~~~~~~~~~~~~~l~gH~~~V---------~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~--------~ 328 (531)
+...+..+|+.+.++....... ..+++ .+..++.++.|+.|..+|..+|+.+..+..... .
T Consensus 80 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~s 157 (582)
T 1flg_A 80 LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGA 157 (582)
T ss_dssp EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSC
T ss_pred EEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccC
Confidence 6667777888877775443210 12222 245688888899999999999999887654331 1
Q ss_pred eEEEEccCCCCCcEEEEeeC------CCeEEEEECCCCceeEEEcccCCCe-----------------------------
Q 009597 329 YVVKLNPDDDKQNILLAGMS------DKKIVQWDMNTKEITQEYDQHLGAV----------------------------- 373 (531)
Q Consensus 329 ~~~~~~~~~~~~~~l~sg~~------dg~I~iwd~~t~~~~~~~~~h~~~I----------------------------- 373 (531)
.++.-. .......+++++. ++.|+.+|..+++.+-........+
T Consensus 158 P~v~~~-~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~ 236 (582)
T 1flg_A 158 PTIVKD-GKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGK 236 (582)
T ss_dssp CEEEEC-TTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSB
T ss_pred CEEeCC-CcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCcccccccc
Confidence 111111 0111125666653 7899999999999887654311000
Q ss_pred ------------eEEEEecCCCEEEEEeC--------------------C----CCEEEEEcCCCeEEEEeeCC-CCC--
Q 009597 374 ------------NTITFVDSNRRFVTSSD--------------------D----KSLRVWEFGIPVVIKYISEP-HMH-- 414 (531)
Q Consensus 374 ------------~~l~~sp~~~~l~s~s~--------------------D----g~I~iwd~~~~~~~~~~~~~-~~~-- 414 (531)
..+++.|...+++.++. | +.|..+|..+++.+-.+... |..
T Consensus 237 ~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd 316 (582)
T 1flg_A 237 VESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWD 316 (582)
T ss_dssp CGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSC
T ss_pred ccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCccc
Confidence 13566677777776653 2 57999999999887766542 211
Q ss_pred --CccE-EEEe---CCCC---EEEEEEcCCeEEEEEcCCcceeceeeeec------------CC----------------
Q 009597 415 --SMPS-ISLH---PNTN---WLAAQSLDNQILIYSTRERFQLNKKKRFA------------GH---------------- 457 (531)
Q Consensus 415 --~v~~-v~~s---p~~~---~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~------------~~---------------- 457 (531)
.+.. +.+. .+|+ .++.++.+|.++++|..+++.+.....-. +.
T Consensus 317 ~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~ 396 (582)
T 1flg_A 317 FSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQ 396 (582)
T ss_dssp CCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTC
T ss_pred ccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccc
Confidence 1111 1122 4664 78889999999999998887654322110 00
Q ss_pred -cccc-----------ceEEEEEcCCCCEEEEEe---------------------------------CCCcEEEEECCCC
Q 009597 458 -IVAG-----------YACQVNFSPDGRFVMSGD---------------------------------GEGKCWFWDWKSC 492 (531)
Q Consensus 458 -~~~~-----------~v~~l~~spdg~~l~sgs---------------------------------~dg~I~iwd~~~~ 492 (531)
.... ....++++|+..++++.. .+|.|..||+.++
T Consensus 397 ~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG 476 (582)
T 1flg_A 397 KHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSG 476 (582)
T ss_dssp SSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTC
T ss_pred cCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCC
Confidence 0000 001246677655554432 2578999999999
Q ss_pred eEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 493 KVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 493 ~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
+.+.+...+. ++..-.... .+.+++.++.||.|+.||
T Consensus 477 ~~~W~~~~~~-~~~~g~~~t-agglvf~g~~dg~l~A~D 513 (582)
T 1flg_A 477 KVVWEHKEHL-PLWAGVLAT-AGNLVFTGTGDGYFKAFD 513 (582)
T ss_dssp CEEEEEEESS-CCCSCCEEE-TTTEEEEECTTSEEEEEE
T ss_pred CEEEEecCCC-CCcccceEe-CCCEEEEECCCCcEEEEE
Confidence 9887776432 222211222 345788899999999886
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.45 E-value=3.9e-05 Score=82.12 Aligned_cols=230 Identities=13% Similarity=0.006 Sum_probs=143.1
Q ss_pred CCCceeeeeecccCeeeEEecCcc--C--ceEE-EEEccCCCEEEEEec------CCeEEEEeCCCCcEEEEccCCCcc-
Q 009597 261 EKGEHVEDKSTFHGKCMRTYMGHS--K--AVRD-ISFCNDGTKFLTASY------DKNIKYWDTETGQVIRTFSTGKIP- 328 (531)
Q Consensus 261 ~~~~~i~~~~~~~~~~~~~l~gH~--~--~V~~-l~fspdg~~l~s~s~------Dg~I~vWd~~t~~~i~~~~~~~~~- 328 (531)
..++.+...+..+|+.+..+.... . .+.+ ... .++ .++.++. ++.|..+|..+|+.+.++......
T Consensus 122 ~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~ 199 (571)
T 2ad6_A 122 QANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDD 199 (571)
T ss_dssp CTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHH
T ss_pred eCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCcc
Confidence 445678888888888887654221 1 1221 111 144 4555554 789999999999999877643221
Q ss_pred --------------------------------------eEEEEccCCCCCcEEEEeeCC----------------CeEEE
Q 009597 329 --------------------------------------YVVKLNPDDDKQNILLAGMSD----------------KKIVQ 354 (531)
Q Consensus 329 --------------------------------------~~~~~~~~~~~~~~l~sg~~d----------------g~I~i 354 (531)
....+. .. ..+++.+..+ +.|..
T Consensus 200 ~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d--~~-~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~A 276 (571)
T 2ad6_A 200 SVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYD--PK-LNLFYYGSGNPAPWNETMRPGDNKWTMTIWG 276 (571)
T ss_dssp HHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEE--TT-TTEEEEECCCCSCSCGGGSCSCCTTTTEEEE
T ss_pred ccccCcccccccccccccccccccCcccceecCCCCeeeeEEEc--CC-CCeEEEECCCCccccCCccCCCceeEEEEEE
Confidence 001111 11 2345555432 36999
Q ss_pred EECCCCceeEEEcccCC------CeeE---EEEecCCC---EEEEEeCCCCEEEEEcCCCeEEEEeeCCCC---------
Q 009597 355 WDMNTKEITQEYDQHLG------AVNT---ITFVDSNR---RFVTSSDDKSLRVWEFGIPVVIKYISEPHM--------- 413 (531)
Q Consensus 355 wd~~t~~~~~~~~~h~~------~I~~---l~~sp~~~---~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~--------- 413 (531)
+|..+++.+..+..... .+.. +....+|+ .++.++.+|.+.++|..+++.+........
T Consensus 277 ld~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~ 356 (571)
T 2ad6_A 277 RDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDL 356 (571)
T ss_dssp EETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECT
T ss_pred EecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccc
Confidence 99999999888753211 1112 22224674 577888999999999999987766543210
Q ss_pred ---CCc--------------------------cEEEEeCCCCEEEEEEc-------------------------------
Q 009597 414 ---HSM--------------------------PSISLHPNTNWLAAQSL------------------------------- 433 (531)
Q Consensus 414 ---~~v--------------------------~~v~~sp~~~~l~s~s~------------------------------- 433 (531)
.++ ..++++|+..+|++.+.
T Consensus 357 ~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 436 (571)
T 2ad6_A 357 KTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPN 436 (571)
T ss_dssp TTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTT
T ss_pred cCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCcc
Confidence 011 24678888777776643
Q ss_pred ------CCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecc
Q 009597 434 ------DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 501 (531)
Q Consensus 434 ------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h 501 (531)
+|.|..||+.+++.+.....- ..... ..+...+..++.++.||.|+.||.++++.+.++...
T Consensus 437 ~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~-----~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 437 GPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWG-----GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp STTSCCCEEEEEECTTTCCEEEEEEES-SCCCS-----BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccCCCCCCeEEEEECCCCCEEEEecCC-CCccc-----eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 468889998887665443321 11111 112234667788999999999999999999988744
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.45 E-value=7.9e-05 Score=76.79 Aligned_cols=240 Identities=10% Similarity=0.012 Sum_probs=140.5
Q ss_pred ceEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCC----eEEEEECCCC
Q 009597 286 AVRDISFCN-DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK----KIVQWDMNTK 360 (531)
Q Consensus 286 ~V~~l~fsp-dg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg----~I~iwd~~t~ 360 (531)
....|+++| ++..|+.+...+.|+.+|+.++...........+..+.+.+... .++++...++ .+.+++.. +
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~--~lyvad~~~~~~~~~v~~~~~~-g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEAD--SMIITNDQNNNDRPNNYILTRE-S 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSS--EEEEEECCSCTTSEEEEEEEGG-G
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCC--EEEEEeCCCCcccceEEEEeCC-C
Confidence 457889997 45556666655889999998877665555555566666665432 3555544322 34444432 2
Q ss_pred cee--EEEcccCCCeeEEEEec-CCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEE-EcCCe
Q 009597 361 EIT--QEYDQHLGAVNTITFVD-SNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQ-SLDNQ 436 (531)
Q Consensus 361 ~~~--~~~~~h~~~I~~l~~sp-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~-s~Dg~ 436 (531)
... ..+. .......++++| ++.++++-..++.|..++............+.......++|+|++++|+.+ ...+.
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 221 2232 234467889999 677677766788999999987765333333233456789999999955554 46678
Q ss_pred EEEEEcCCc-ceeceeeeecCC------c-------cccceE-EEEEc--------CCCCEEEEEeCCCcEEEEECCCCe
Q 009597 437 ILIYSTRER-FQLNKKKRFAGH------I-------VAGYAC-QVNFS--------PDGRFVMSGDGEGKCWFWDWKSCK 493 (531)
Q Consensus 437 I~iwd~~~~-~~~~~~~~~~~~------~-------~~~~v~-~l~~s--------pdg~~l~sgs~dg~I~iwd~~~~~ 493 (531)
|..++.... ..+.....+.+. . .-.... .++.. ++|.++++-...+.|+.++ ..+.
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~ 372 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGR 372 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSE
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCc
Confidence 999876532 111111111110 0 001122 34443 4466666666677899888 4565
Q ss_pred EEEEeec----c----C---------CcEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 494 VFRTLKC----H----E---------GVCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 494 ~~~~~~~----h----~---------~~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
....... . . .....+++.|.++.++++-.....|+.+
T Consensus 373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence 4433321 0 1 1468999998556666666566777764
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.42 E-value=2.5e-05 Score=85.30 Aligned_cols=253 Identities=13% Similarity=0.155 Sum_probs=155.8
Q ss_pred CCCCceeeeeecccCeeeEEecCcc----CceEEEEEccCCCEEEEEec------CCeEEEEeCCCCcEEEEccCCC--c
Q 009597 260 GEKGEHVEDKSTFHGKCMRTYMGHS----KAVRDISFCNDGTKFLTASY------DKNIKYWDTETGQVIRTFSTGK--I 327 (531)
Q Consensus 260 ~~~~~~i~~~~~~~~~~~~~l~gH~----~~V~~l~fspdg~~l~s~s~------Dg~I~vWd~~t~~~i~~~~~~~--~ 327 (531)
+..++.+..++..+|+.+..+.... ..+.+--.-.++ .++.+.. +|.|..+|..+|+.+..+.... .
T Consensus 123 ~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p 201 (668)
T 1kv9_A 123 GTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDP 201 (668)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCT
T ss_pred EcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCC
Confidence 3456778888888899888776421 111110000144 4554433 5899999999999998875321 0
Q ss_pred c------------------------------eEEEEccCCCCCcEEEEeeCCC-------------------eEEEEECC
Q 009597 328 P------------------------------YVVKLNPDDDKQNILLAGMSDK-------------------KIVQWDMN 358 (531)
Q Consensus 328 ~------------------------------~~~~~~~~~~~~~~l~sg~~dg-------------------~I~iwd~~ 358 (531)
. ....+.+ ...+++.++.++ .|..+|..
T Consensus 202 ~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~---~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~ 278 (668)
T 1kv9_A 202 ALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP---ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPD 278 (668)
T ss_dssp TSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET---TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT
T ss_pred CccccccccccccccCCccceeeeCCCCccccceEEcC---CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCC
Confidence 0 0112222 235677777665 49999999
Q ss_pred CCceeEEEcc--cC-------CCeeEEEEecCCC---EEEEEeCCCCEEEEEcCCCeEEEEeeCCC-----------CC-
Q 009597 359 TKEITQEYDQ--HL-------GAVNTITFVDSNR---RFVTSSDDKSLRVWEFGIPVVIKYISEPH-----------MH- 414 (531)
Q Consensus 359 t~~~~~~~~~--h~-------~~I~~l~~sp~~~---~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~-----------~~- 414 (531)
+++.+..+.. |. .+.....+..+++ .++.++.+|.+.++|..+++.+..+.... ..
T Consensus 279 tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p 358 (668)
T 1kv9_A 279 TGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRP 358 (668)
T ss_dssp TCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCE
T ss_pred CCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCc
Confidence 9999888864 22 2233333334665 68899999999999999998774332111 00
Q ss_pred -----------------------CccEEEEeCCCCEEEEEE------------------------------------cCC
Q 009597 415 -----------------------SMPSISLHPNTNWLAAQS------------------------------------LDN 435 (531)
Q Consensus 415 -----------------------~v~~v~~sp~~~~l~s~s------------------------------------~Dg 435 (531)
.-..++++|+..++++.. .+|
T Consensus 359 ~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g 438 (668)
T 1kv9_A 359 VEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSG 438 (668)
T ss_dssp EECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEE
T ss_pred cccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccc
Confidence 011367888766665532 237
Q ss_pred eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcE-EEEEEecCC
Q 009597 436 QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC-IGCEWHPLE 514 (531)
Q Consensus 436 ~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V-~~v~~~p~~ 514 (531)
.|..||+.+++.+....... . .....+...+.+|++|+.||.|++||.++++.+..+....+.. .-+.+..++
T Consensus 439 ~l~A~D~~tG~~~W~~~~~~-~-----~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G 512 (668)
T 1kv9_A 439 ALLAWDPVKQKAAWKVPYPT-H-----WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAG 512 (668)
T ss_dssp EEEEEETTTTEEEEEEEESS-S-----CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred eEEEEeCCCCcEEEEccCCC-C-----CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECC
Confidence 89999999887664443211 1 1112344467889999999999999999999999887554311 122333323
Q ss_pred CCEEEEEe
Q 009597 515 QSKVATCG 522 (531)
Q Consensus 515 ~~~l~t~s 522 (531)
..+++.++
T Consensus 513 ~~yva~~~ 520 (668)
T 1kv9_A 513 RQYVAIMA 520 (668)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 33555554
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.39 E-value=0.0006 Score=75.88 Aligned_cols=235 Identities=8% Similarity=0.039 Sum_probs=147.7
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC------CcceEEEEccCCCCCcEEEEeeCCCeEEEEEC
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG------KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 357 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~------~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~ 357 (531)
...|.++...++|. |..|+.+ -|.+|+..++......... ....+.++..+.. ..|..|+.++-|..|+.
T Consensus 262 ~~~i~~i~~d~~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~--g~lWigt~~~Gl~~~~~ 337 (795)
T 4a2l_A 262 SNYIRSLAMDSQNR-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQ--GGMWLGTYFGGLNYYHP 337 (795)
T ss_dssp CSBEEEEEECTTSC-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTT--SCEEEEESSSCEEEECG
T ss_pred CCeEEEEEEcCCCC-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCC--cCEEEEECCCCeEEeCC
Confidence 35799999998887 5556655 5899998877655432211 1123445544443 33777888888999987
Q ss_pred CCCceeEEEcc-------cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCC-------CCCCccEEEEeC
Q 009597 358 NTKEITQEYDQ-------HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEP-------HMHSMPSISLHP 423 (531)
Q Consensus 358 ~t~~~~~~~~~-------h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~-------~~~~v~~v~~sp 423 (531)
.+.... .+.. ....|.++...++|. |..|+.++-|..|+..++......... ....|.+++..+
T Consensus 338 ~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~ 415 (795)
T 4a2l_A 338 IRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE 415 (795)
T ss_dssp GGGSSE-EECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET
T ss_pred Ccccce-EEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC
Confidence 655432 2221 235688998887776 555777777999998877554443211 235688898888
Q ss_pred CCCEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec---
Q 009597 424 NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC--- 500 (531)
Q Consensus 424 ~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~--- 500 (531)
++.+|.+|+.++-|.+||..++... .............|.++...++|.+.+.. . +-|.+||..+++.......
T Consensus 416 ~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~ 492 (795)
T 4a2l_A 416 KKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDG 492 (795)
T ss_dssp TTTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTC
T ss_pred CCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccc
Confidence 8886777888888999998765322 11110111223458888888888866544 4 4588999887765432211
Q ss_pred ---cCCcEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 501 ---HEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 501 ---h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
+...|.++...+ ++.+.+ |+..| |..|
T Consensus 493 ~~~~~~~i~~i~~d~-~g~lWi-gt~~G-l~~~ 522 (795)
T 4a2l_A 493 TPVVSKQITTLFRDS-HKRLWI-GGEEG-LSVF 522 (795)
T ss_dssp CBCCCCCEEEEEECT-TCCEEE-EESSC-EEEE
T ss_pred cccCCceEEEEEECC-CCCEEE-EeCCc-eEEE
Confidence 235688888877 555444 33444 5444
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.36 E-value=0.0003 Score=78.36 Aligned_cols=236 Identities=9% Similarity=0.082 Sum_probs=144.9
Q ss_pred eEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEE
Q 009597 287 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY 366 (531)
Q Consensus 287 V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~ 366 (531)
|.++...+++. |..++.++-|..|+..+++............+..+..+.. ..+.+|+.++-|.+||..+++.....
T Consensus 175 i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~--g~lwigt~~~Gl~~~~~~~~~~~~~~ 251 (795)
T 4a2l_A 175 IASTLYRQGDQ-IYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSP--TRIWVATEGAGLFLINPKTKEIKNYL 251 (795)
T ss_dssp CEEEEEEETTE-EEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEET--TEEEEEEBSSCEEEEETTTTEEEEEC
T ss_pred eEEEEECCCCC-EEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCC--CCEEEEECCCCeEEEeCCCCeEEEee
Confidence 88998888886 5556665569999988776544322111223333333322 34566665555899998876544332
Q ss_pred cc-------cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCC------CCCCccEEEEeCCCCEEEEEEc
Q 009597 367 DQ-------HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEP------HMHSMPSISLHPNTNWLAAQSL 433 (531)
Q Consensus 367 ~~-------h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~------~~~~v~~v~~sp~~~~l~s~s~ 433 (531)
.. ....|.++...++|.+.+ |+.+ -|.+||..+.......... ....|.++...++|. |.+|+.
T Consensus 252 ~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~ 328 (795)
T 4a2l_A 252 HSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTY 328 (795)
T ss_dssp CCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEES
T ss_pred cCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEEC
Confidence 21 135689999888887555 4445 5899998887655443211 235688998888887 556777
Q ss_pred CCeEEEEEcCCcceeceeeee--cCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec--------cCC
Q 009597 434 DNQILIYSTRERFQLNKKKRF--AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC--------HEG 503 (531)
Q Consensus 434 Dg~I~iwd~~~~~~~~~~~~~--~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~--------h~~ 503 (531)
++-|.+|+...... ...... ........|.++...++|.+ ..|+.++-|..||..+++....... ...
T Consensus 329 ~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~ 406 (795)
T 4a2l_A 329 FGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSN 406 (795)
T ss_dssp SSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCS
T ss_pred CCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCc
Confidence 78899998755321 111111 11112345888888888874 4577777799999887654332211 235
Q ss_pred cEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 504 VCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 504 ~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.|.+++..+ ++.+|..|+.++-|.+||
T Consensus 407 ~v~~i~~d~-~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 407 NIKAVYVDE-KKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp CEEEEEEET-TTTEEEEEETTTEEEEEE
T ss_pred cEEEEEEcC-CCCEEEEEeCcCceeEEe
Confidence 688888877 565355566655566553
No 260
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.35 E-value=0.0003 Score=66.75 Aligned_cols=205 Identities=9% Similarity=0.137 Sum_probs=128.2
Q ss_pred EEecCccCceEEEEEccCCCEEE-EEecCCeEEEEeCCCCcEEEEccCC--CcceEEEEccCCCCCcEEEEeeCCCeEEE
Q 009597 278 RTYMGHSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTG--KIPYVVKLNPDDDKQNILLAGMSDKKIVQ 354 (531)
Q Consensus 278 ~~l~gH~~~V~~l~fspdg~~l~-s~s~Dg~I~vWd~~t~~~i~~~~~~--~~~~~~~~~~~~~~~~~l~sg~~dg~I~i 354 (531)
+.+.|-...+..|+|+|++..|+ +...++.|...|+. ++.++.+... .....+.+.. .+.++++.-.++.+.+
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~---~g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG---DNQFVISDERDYAIYV 95 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS---TTEEEEEETTTTEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC---CCEEEEEECCCCcEEE
Confidence 35666667899999999765554 56778899999998 8888887544 2334444442 2345566667788999
Q ss_pred EECCCCce---eEEEc------ccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCC---CeEEEEee------CCCCCCc
Q 009597 355 WDMNTKEI---TQEYD------QHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI---PVVIKYIS------EPHMHSM 416 (531)
Q Consensus 355 wd~~t~~~---~~~~~------~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~---~~~~~~~~------~~~~~~v 416 (531)
+++..... +.... ........|+|.|.++.|+++.......||.+.. ...+..+. ......+
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 98865442 23332 1234468999999998888877766666666641 11111111 1234567
Q ss_pred cEEEEeCC-CCEEEEEEcCCeEEEEEcCCcceeceeeeecCCc----cccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 009597 417 PSISLHPN-TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI----VAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488 (531)
Q Consensus 417 ~~v~~sp~-~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~----~~~~v~~l~~spdg~~l~sgs~dg~I~iwd 488 (531)
.+++++|. +++++.......|.++|.... .+.......+.. .-...-.|+|.++|++.++ ++-..++++.
T Consensus 176 S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred eeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 89999995 455555556678888987654 332222222210 0123556999999985555 6666666664
No 261
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.33 E-value=0.00024 Score=73.19 Aligned_cols=239 Identities=8% Similarity=-0.035 Sum_probs=140.9
Q ss_pred ceEEEEEccC--CCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCC---C-eEEEEECCC
Q 009597 286 AVRDISFCND--GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD---K-KIVQWDMNT 359 (531)
Q Consensus 286 ~V~~l~fspd--g~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d---g-~I~iwd~~t 359 (531)
...+|+|+|+ ...|+.+...+.|+.+|..++...........+..+.+.+.. +++++.... . .+..++...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG---~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNG---DMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTC---CEEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCC---CEEEEcCCCCcccceEEEEECCC
Confidence 4578999984 344555554489999999888877666545556666666543 345444321 1 233333322
Q ss_pred Cce-eEEEcccCCCeeEEEEec-CCCEEEEEeCCCCEEEEEcCCCeEEEE-eeCCCCCCccEEEEeCCCCEEEEEE-cCC
Q 009597 360 KEI-TQEYDQHLGAVNTITFVD-SNRRFVTSSDDKSLRVWEFGIPVVIKY-ISEPHMHSMPSISLHPNTNWLAAQS-LDN 435 (531)
Q Consensus 360 ~~~-~~~~~~h~~~I~~l~~sp-~~~~l~s~s~Dg~I~iwd~~~~~~~~~-~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg 435 (531)
+.. ...+. .......+++.| ++.++++-..++.|+.+|..++..... ...........++|+|++++|..+. ..+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 211 11221 234557789999 677666666778899999986655222 2222222234699999999555554 567
Q ss_pred eEEEEEcCCc-ceeceeeeecCC------c-------cccceEEEEE---------cCCCCEEEEEeCCCcEEEEECCCC
Q 009597 436 QILIYSTRER-FQLNKKKRFAGH------I-------VAGYACQVNF---------SPDGRFVMSGDGEGKCWFWDWKSC 492 (531)
Q Consensus 436 ~I~iwd~~~~-~~~~~~~~~~~~------~-------~~~~v~~l~~---------spdg~~l~sgs~dg~I~iwd~~~~ 492 (531)
.|+.++.... ..+.....+.+. . .-.....+++ .++|.++++-...+.|+.++. ++
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 8999886521 111100111110 0 0123566888 777877777777889999984 56
Q ss_pred eEEEEeecc------------------CCcEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 493 KVFRTLKCH------------------EGVCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 493 ~~~~~~~~h------------------~~~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
.... +.+. -.....+++.|.++.++++-...+.|+.+
T Consensus 375 ~v~t-~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 429 (433)
T 4hw6_A 375 RVTT-YAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI 429 (433)
T ss_dssp EEEE-EECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred CEEE-EEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence 4433 3221 11367899995466666666667777765
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.32 E-value=0.00046 Score=68.90 Aligned_cols=235 Identities=10% Similarity=-0.013 Sum_probs=141.3
Q ss_pred ccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCce
Q 009597 283 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI 362 (531)
Q Consensus 283 H~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~ 362 (531)
+....+|.+..++. +|+.+. ...|+..++........+.....+..+.+.+ ..+.++++-...+.|..+++.....
T Consensus 32 ~~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~ 107 (349)
T 3v64_C 32 RPDRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHH--RRELVFWSDVTLDRILRANLNGSNV 107 (349)
T ss_dssp CTTSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEec--cccEEEEEeccCCceEEEecCCCCc
Confidence 34455666666644 444443 4568888887766655554444455555554 3446777777789999999987665
Q ss_pred eEEEcccCCCeeEEEEecCCCE-EEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-cC-CeEEE
Q 009597 363 TQEYDQHLGAVNTITFVDSNRR-FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS-LD-NQILI 439 (531)
Q Consensus 363 ~~~~~~h~~~I~~l~~sp~~~~-l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~D-g~I~i 439 (531)
...+.........+++.+.+.. +++-...+.|.+.++........+ .........++++|.+..|+... .. +.|..
T Consensus 108 ~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 108 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 186 (349)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CTTCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE-eCCCCCcceEEEecCcCeEEEeccCCCCEEEE
Confidence 5444444456688999975554 455556778999998765433222 22345678999999655555444 44 78888
Q ss_pred EEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEE
Q 009597 440 YSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 518 (531)
Q Consensus 440 wd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 518 (531)
+++........ .... -.....|+++|++..|+.+. ..+.|..+|+........+........++++. ++.++
T Consensus 187 ~~~dG~~~~~~---~~~~--~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~--~~~ly 259 (349)
T 3v64_C 187 SSMDGSGRRII---ADTH--LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLY 259 (349)
T ss_dssp EETTSCSCEES---CCSS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE--TTEEE
T ss_pred EeCCCCCcEEE---EECC--CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE--CCEEE
Confidence 88765322111 1111 23467799998776666555 56789999986433222232233345677773 34444
Q ss_pred EEEeCCCCEEe
Q 009597 519 ATCGWDGLIKY 529 (531)
Q Consensus 519 ~t~s~Dg~I~i 529 (531)
++-...+.|..
T Consensus 260 ~td~~~~~V~~ 270 (349)
T 3v64_C 260 WTDWHTKSINS 270 (349)
T ss_dssp EEETTTTEEEE
T ss_pred EecCCCCeEEE
Confidence 44444455543
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.28 E-value=0.00018 Score=77.23 Aligned_cols=254 Identities=13% Similarity=0.050 Sum_probs=150.5
Q ss_pred CCCCceeeeeecccCeeeEEecCcc----CceEE-EEEccCCCEEEEEe------cCCeEEEEeCCCCcEEEEccCCCcc
Q 009597 260 GEKGEHVEDKSTFHGKCMRTYMGHS----KAVRD-ISFCNDGTKFLTAS------YDKNIKYWDTETGQVIRTFSTGKIP 328 (531)
Q Consensus 260 ~~~~~~i~~~~~~~~~~~~~l~gH~----~~V~~-l~fspdg~~l~s~s------~Dg~I~vWd~~t~~~i~~~~~~~~~ 328 (531)
+..++.+...+..+|+.+..+.... ..+.+ -.+ .++ .++.++ .++.|+.+|..+|+.+..+......
T Consensus 127 ~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~ 204 (599)
T 1w6s_A 127 TQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPD 204 (599)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCH
T ss_pred EcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCc
Confidence 3456677888888888887654321 01221 111 145 455554 3799999999999999887654321
Q ss_pred eEE-------------------------------------EEccCCCCCcEEEEeeCC----------------CeEEEE
Q 009597 329 YVV-------------------------------------KLNPDDDKQNILLAGMSD----------------KKIVQW 355 (531)
Q Consensus 329 ~~~-------------------------------------~~~~~~~~~~~l~sg~~d----------------g~I~iw 355 (531)
... ....+. ...+++.+..+ +.|..+
T Consensus 205 ~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al 283 (599)
T 1w6s_A 205 KDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR 283 (599)
T ss_dssp HHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred cccccccccccccccccccccccccCCCcceecCCCccccceeEeC-CCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence 000 001111 23456666554 489999
Q ss_pred ECCCCceeEEEcccCCC------e---eEEEEe-cCC---CEEEEEeCCCCEEEEEcCCCeEEEEeeCCC----------
Q 009597 356 DMNTKEITQEYDQHLGA------V---NTITFV-DSN---RRFVTSSDDKSLRVWEFGIPVVIKYISEPH---------- 412 (531)
Q Consensus 356 d~~t~~~~~~~~~h~~~------I---~~l~~s-p~~---~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~---------- 412 (531)
|..+++.+..++..... . .-+... .+| ..++.++.+|.+.++|..+++.+.......
T Consensus 284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~ 363 (599)
T 1w6s_A 284 DADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDL 363 (599)
T ss_dssp ETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECT
T ss_pred eCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccccc
Confidence 99999998877543211 1 112222 456 467778899999999999998776554211
Q ss_pred --CC--------------------------CccEEEEeCCCCEEEEEE--------------------------------
Q 009597 413 --MH--------------------------SMPSISLHPNTNWLAAQS-------------------------------- 432 (531)
Q Consensus 413 --~~--------------------------~v~~v~~sp~~~~l~s~s-------------------------------- 432 (531)
.. .-..++++|+..++++..
T Consensus 364 ~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~ 443 (599)
T 1w6s_A 364 KTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPK 443 (599)
T ss_dssp TTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTT
T ss_pred CCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCc
Confidence 00 012466777766665532
Q ss_pred -------cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcE
Q 009597 433 -------LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 505 (531)
Q Consensus 433 -------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V 505 (531)
..|.|..||+.+++.+-.... ......+ .+...+.+|+.++.||.|+.||.++++.+.+++...+.+
T Consensus 444 ~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g-----~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~ 517 (599)
T 1w6s_A 444 GDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGG-----TMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAI 517 (599)
T ss_dssp SBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSB-----CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred CCcccCCCcCeEEEEECCCCCEEeEecC-CCCccCc-----ceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcE
Confidence 236777888877765543321 1111111 112246778889999999999999999999887543321
Q ss_pred -EEEEEecCCCCEEEEEe
Q 009597 506 -IGCEWHPLEQSKVATCG 522 (531)
Q Consensus 506 -~~v~~~p~~~~~l~t~s 522 (531)
.-+.+..++..++++.+
T Consensus 518 ~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 518 GYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp SCCEEEEETTEEEEEEEE
T ss_pred eccEEEEeCCEEEEEEEc
Confidence 12344443444555443
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.26 E-value=0.00055 Score=69.33 Aligned_cols=233 Identities=10% Similarity=-0.015 Sum_probs=140.4
Q ss_pred ceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEE
Q 009597 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE 365 (531)
Q Consensus 286 ~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~ 365 (531)
.-.|.+..+.+ +|+.+. ...|+..++........+.....+..+.+.+ ..+.++++-...+.|..+++........
T Consensus 78 ~~~C~~~~~~~-~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 153 (386)
T 3v65_B 78 RRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHH--RRELVFWSDVTLDRILRANLNGSNVEEV 153 (386)
T ss_dssp SSCEEECSSCC-EEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCCEEEE
T ss_pred CCeECCccccc-eeEeec-CccceeeccCCCcEEEEecCCCccEEEEEec--CCCeEEEEeCCCCcEEEEecCCCCcEEE
Confidence 34455555533 444443 4578889988776655554445555555554 3446777777889999999987665444
Q ss_pred EcccCCCeeEEEEecCCCE-EEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc-C-CeEEEEEc
Q 009597 366 YDQHLGAVNTITFVDSNRR-FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL-D-NQILIYST 442 (531)
Q Consensus 366 ~~~h~~~I~~l~~sp~~~~-l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~-D-g~I~iwd~ 442 (531)
+.........|++.+.+.. +++-...+.|.+.++........+ .........++++|.+..|+.... . +.|..+++
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~-~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE-CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee-cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 4444455678999975554 455555678888888754333223 224456789999997666555443 3 67888887
Q ss_pred CCcceeceeeeecCCccccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEE
Q 009597 443 RERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 521 (531)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~ 521 (531)
........ .... -.....|+|+|++..|+.+. ..+.|..+|+........+........++++. ++.++++-
T Consensus 233 dG~~~~~~---~~~~--~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~--~~~ly~td 305 (386)
T 3v65_B 233 DGSGRRII---ADTH--LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTD 305 (386)
T ss_dssp TSCSCEEE---ECSS--CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE--TTEEEEEE
T ss_pred CCCCcEEE---EECC--CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE--CCEEEEee
Confidence 65322111 1111 23466799998766666554 56789999986433322233233345677773 44455555
Q ss_pred eCCCCEEee
Q 009597 522 GWDGLIKYW 530 (531)
Q Consensus 522 s~Dg~I~iW 530 (531)
...+.|..+
T Consensus 306 ~~~~~V~~~ 314 (386)
T 3v65_B 306 WHTKSINSA 314 (386)
T ss_dssp TTTTEEEEE
T ss_pred CCCCeEEEE
Confidence 445555543
No 265
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.22 E-value=0.0019 Score=63.40 Aligned_cols=220 Identities=7% Similarity=-0.055 Sum_probs=132.6
Q ss_pred EEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC----CceeEEEcccCCCee
Q 009597 299 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT----KEITQEYDQHLGAVN 374 (531)
Q Consensus 299 l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t----~~~~~~~~~h~~~I~ 374 (531)
|+.+.. ..|+..|+.+.+....+.....+..+.+.+. .+.++++-...+.|..+++.. ......+........
T Consensus 4 ll~~~~-~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~--~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEECB-SSEEEEETTSCCCEEEECSCSSEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEECC-CeEEEEECCCcceEehhcCCCceEEEEEEeC--CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 444443 5689999988776666655555556666543 346777777789999999876 222223333334568
Q ss_pred EEEEecCCC-EEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcC--CeEEEEEcCCcceecee
Q 009597 375 TITFVDSNR-RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD--NQILIYSTRERFQLNKK 451 (531)
Q Consensus 375 ~l~~sp~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~D--g~I~iwd~~~~~~~~~~ 451 (531)
.|++.+.+. .+++-...+.|.++++........+. ........++++|.+..|+..... +.|..+++...... .+
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~-~~ 158 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SL 158 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-EE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE-CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE-EE
Confidence 999987555 44555667889999987654333332 234567899999966666555543 68888887643221 11
Q ss_pred eeecCCccccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEe-ec--cCCcEEEEEEecCCCCEEEEEeCCCCE
Q 009597 452 KRFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCKVFRTL-KC--HEGVCIGCEWHPLEQSKVATCGWDGLI 527 (531)
Q Consensus 452 ~~~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~~~~~~-~~--h~~~V~~v~~~p~~~~~l~t~s~Dg~I 527 (531)
.... -.....+++++++..|+.++ ..+.|..+|+.... ...+ .. ......++++. ++.++++-...+.|
T Consensus 159 --~~~~--~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V 231 (316)
T 1ijq_A 159 --VTEN--IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAI 231 (316)
T ss_dssp --ECSS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEE
T ss_pred --EECC--CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeE
Confidence 1111 23467799999877766655 56789999986432 2222 21 12345677774 34455555445556
Q ss_pred Eee
Q 009597 528 KYW 530 (531)
Q Consensus 528 ~iW 530 (531)
..+
T Consensus 232 ~~~ 234 (316)
T 1ijq_A 232 FSA 234 (316)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.19 E-value=0.0049 Score=60.38 Aligned_cols=226 Identities=6% Similarity=-0.090 Sum_probs=133.5
Q ss_pred eeeeecccCeeeEEecCccCceEEEEEccCCC-EEEEEecCCeEEEEeCCC----CcEEEEccC-CCcceEEEEccCCCC
Q 009597 266 VEDKSTFHGKCMRTYMGHSKAVRDISFCNDGT-KFLTASYDKNIKYWDTET----GQVIRTFST-GKIPYVVKLNPDDDK 339 (531)
Q Consensus 266 i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~-~l~s~s~Dg~I~vWd~~t----~~~i~~~~~-~~~~~~~~~~~~~~~ 339 (531)
|+..+....+....+. ....+.+++|++.+. .+++-...+.|..+++.. ......+.. ...+..+.+.+. .
T Consensus 12 I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~--~ 88 (316)
T 1ijq_A 12 VRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI--H 88 (316)
T ss_dssp EEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT--T
T ss_pred EEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec--C
Confidence 4444444444333333 345678999998654 455555678999999876 222222221 234455666543 3
Q ss_pred CcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeC-C-CCEEEEEcCCCeEEEEeeCCCCCCcc
Q 009597 340 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD-D-KSLRVWEFGIPVVIKYISEPHMHSMP 417 (531)
Q Consensus 340 ~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~-D-g~I~iwd~~~~~~~~~~~~~~~~~v~ 417 (531)
++++++-...+.|.++++........+.........+++.|.+.+|+.+.. . +.|...++..... ..+.........
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~~~~~~~~P~ 167 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPN 167 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEEEECCCCCce
Confidence 366777777889999998755443334434467789999986666555443 3 6788888765433 223222345567
Q ss_pred EEEEeCCCCEEEEEE-cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 009597 418 SISLHPNTNWLAAQS-LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFR 496 (531)
Q Consensus 418 ~v~~sp~~~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~ 496 (531)
.++++|++..|..+. ..+.|..+|+..... ..+..... .-.....+++. .+.++++-...+.|..++..+++.+.
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~-~~~~~~~~--~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEK--RLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVN 243 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTT--TTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecCCCce-EEEeecCC--ccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceE
Confidence 899998776666555 457899999875322 11111111 11234557775 35555566677889999977766555
Q ss_pred Eee
Q 009597 497 TLK 499 (531)
Q Consensus 497 ~~~ 499 (531)
.+.
T Consensus 244 ~i~ 246 (316)
T 1ijq_A 244 LLA 246 (316)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.18 E-value=0.0011 Score=66.02 Aligned_cols=207 Identities=7% Similarity=-0.050 Sum_probs=128.6
Q ss_pred cCceEEEEEccCCCE-EEEEecCCeEEEEeCCCCcEEEEccC-CCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc
Q 009597 284 SKAVRDISFCNDGTK-FLTASYDKNIKYWDTETGQVIRTFST-GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE 361 (531)
Q Consensus 284 ~~~V~~l~fspdg~~-l~s~s~Dg~I~vWd~~t~~~i~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~ 361 (531)
...+..|+|++.... +++-...+.|..+++........+.. ...+..+.+.+. .++++++-...+.|.+.++....
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~--~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV--HDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT--TTEEEEEETTTTEEEEEETTSCS
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecC--CCeEEEEcCCCCeEEEEcCCCCc
Confidence 345789999975444 44555678899999887654443332 234455666553 34677777778899999987654
Q ss_pred eeEEEcccCCCeeEEEEecCCCEEEEE-eCC-CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEE
Q 009597 362 ITQEYDQHLGAVNTITFVDSNRRFVTS-SDD-KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS-LDNQIL 438 (531)
Q Consensus 362 ~~~~~~~h~~~I~~l~~sp~~~~l~s~-s~D-g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~ 438 (531)
....+.........|++.|.+..|+.+ ... +.|..+++...... .+..........++++|++..|..+. ..+.|.
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~ 228 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE 228 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-EEEECCCCCcceEEEeCCCCEEEEEECCCCEEE
Confidence 444444445667899999866555444 444 67888887654322 22222344567899998666555554 557899
Q ss_pred EEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009597 439 IYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499 (531)
Q Consensus 439 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~ 499 (531)
.+++....... ..... ......+++ ..+.++++-...+.|..++..+++....+.
T Consensus 229 ~~~~dG~~~~~---~~~~~--~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 229 RANLDGSHRKA---VISQG--LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EEETTSCSCEE---EECSS--CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEeCCCCceEE---EEeCC--CCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 99986532211 11111 123455777 345555565677888888866666555554
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.15 E-value=0.00042 Score=74.24 Aligned_cols=255 Identities=14% Similarity=0.116 Sum_probs=150.1
Q ss_pred CCCceeeeeecccCeeeEEecCccC----ceE-EEEEcc---CCC-EEEEEe------cCCeEEEEeCCCCcEEEEccCC
Q 009597 261 EKGEHVEDKSTFHGKCMRTYMGHSK----AVR-DISFCN---DGT-KFLTAS------YDKNIKYWDTETGQVIRTFSTG 325 (531)
Q Consensus 261 ~~~~~i~~~~~~~~~~~~~l~gH~~----~V~-~l~fsp---dg~-~l~s~s------~Dg~I~vWd~~t~~~i~~~~~~ 325 (531)
..++.+...+..+|+.+..+..... .+. .-.+.. +|+ .+++++ .++.|..+|..+|+.+......
T Consensus 124 t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~ 203 (582)
T 1flg_A 124 TLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFV 203 (582)
T ss_dssp ETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESS
T ss_pred eCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCC
Confidence 3456777888888888877653321 111 111111 233 455554 3789999999999998776432
Q ss_pred Ccce------EEE----------------------------------EccCCCCCcEEEEeeC-----------------
Q 009597 326 KIPY------VVK----------------------------------LNPDDDKQNILLAGMS----------------- 348 (531)
Q Consensus 326 ~~~~------~~~----------------------------------~~~~~~~~~~l~sg~~----------------- 348 (531)
.... ... ...+. ...+++.+..
T Consensus 204 ~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~-~~g~vyv~~gn~~~~~~~~r~~~gg~~ 282 (582)
T 1flg_A 204 EGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDA-ETNTIIVGAGNPGPWNTWARTAKGGNP 282 (582)
T ss_dssp TTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEET-TTTEEEEEECCBSSSCGGGGSCTTSCS
T ss_pred ccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcC-CCCEEEEeCCCCCcccCcccccCCCcc
Confidence 1100 000 00111 2245555542
Q ss_pred ---C----CeEEEEECCCCceeEEEcc--cCC----CeeE-EEEe---cCCC---EEEEEeCCCCEEEEEcCCCeEEEEe
Q 009597 349 ---D----KKIVQWDMNTKEITQEYDQ--HLG----AVNT-ITFV---DSNR---RFVTSSDDKSLRVWEFGIPVVIKYI 408 (531)
Q Consensus 349 ---d----g~I~iwd~~t~~~~~~~~~--h~~----~I~~-l~~s---p~~~---~l~s~s~Dg~I~iwd~~~~~~~~~~ 408 (531)
| +.|..+|..+++.+-.++. |.. .+.. +.+. .+|+ .++.++.+|.++++|..+++.+...
T Consensus 283 ~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 283 HDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp TTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence 2 6899999999999888753 211 1111 2222 4664 6888999999999999998877655
Q ss_pred eCCCC------------C--------------------------------CccEEEEeCCCCEEEEEEc-----------
Q 009597 409 SEPHM------------H--------------------------------SMPSISLHPNTNWLAAQSL----------- 433 (531)
Q Consensus 409 ~~~~~------------~--------------------------------~v~~v~~sp~~~~l~s~s~----------- 433 (531)
..... . .-..++++|+..++++...
T Consensus 363 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~ 442 (582)
T 1flg_A 363 PFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEV 442 (582)
T ss_dssp ESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCC
T ss_pred ccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccc
Confidence 43210 0 0113566776555555432
Q ss_pred ----------------------CCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 009597 434 ----------------------DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 491 (531)
Q Consensus 434 ----------------------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~ 491 (531)
+|.|..||+.+++.+-..... .....+ . + ...+.+++.|+.||.|+.||.++
T Consensus 443 ~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g-~--~--~tagglvf~g~~dg~l~A~D~~t 516 (582)
T 1flg_A 443 SYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH-LPLWAG-V--L--ATAGNLVFTGTGDGYFKAFDAKS 516 (582)
T ss_dssp CCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES-SCCCSC-C--E--EETTTEEEEECTTSEEEEEETTT
T ss_pred cccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC-CCCccc-c--e--EeCCCEEEEECCCCcEEEEECCC
Confidence 578889999888765443321 111111 1 1 22466888899999999999999
Q ss_pred CeEEEEeeccCCcE-EEEEEecCCCCEEEEEe
Q 009597 492 CKVFRTLKCHEGVC-IGCEWHPLEQSKVATCG 522 (531)
Q Consensus 492 ~~~~~~~~~h~~~V-~~v~~~p~~~~~l~t~s 522 (531)
++.+.+++...+.+ .-+.|..++..++++.+
T Consensus 517 G~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 517 GKELWKFQTGSGIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp CCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCEEEEecCCCCcccCceEEEECCEEEEEEEc
Confidence 99999988644322 12455553444555443
No 269
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.15 E-value=0.00085 Score=74.53 Aligned_cols=237 Identities=8% Similarity=0.025 Sum_probs=142.1
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEcc--------CCCcceEEEEccCCCCCcEEEEeeCCCeEEEE
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--------TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 355 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~--------~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iw 355 (531)
...|.+|...++|. |..|+.++-|..++..+........ .-....+.++..+.. ..|..|+.++-|..|
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g~lWigt~~~Gl~~~ 388 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQ--GKLWIGTDGGGINVF 388 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTT--SCEEEEEBSSCEEEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCC--CCEEEEeCCCcEEEE
Confidence 45799999998886 7778878889999987655433211 011223444444433 236677767778999
Q ss_pred ECCCCceeEEE---cccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEee-CCCCCCccEEEEeCCCCEEEEE
Q 009597 356 DMNTKEITQEY---DQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYIS-EPHMHSMPSISLHPNTNWLAAQ 431 (531)
Q Consensus 356 d~~t~~~~~~~---~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~-~~~~~~v~~v~~sp~~~~l~s~ 431 (531)
|..++...... ......|.++...+++.+.+ |+.++-|..+|..++....... ......|.++...+++. |..|
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwig 466 (781)
T 3v9f_A 389 ENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIG 466 (781)
T ss_dssp ETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEE
T ss_pred ECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEE
Confidence 98654332111 12346788888877776544 6666668999987775433321 11345688888887776 4445
Q ss_pred EcCCeEEEEEcCCcceeceeeeec-CCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec----cCCcEE
Q 009597 432 SLDNQILIYSTRERFQLNKKKRFA-GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC----HEGVCI 506 (531)
Q Consensus 432 s~Dg~I~iwd~~~~~~~~~~~~~~-~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~----h~~~V~ 506 (531)
+. +-|.+|+..++.... ..... .......+.++...++|.+.+ |+..+-|..||..+++... +.. ....|.
T Consensus 467 t~-~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~-~~~~~~l~~~~i~ 542 (781)
T 3v9f_A 467 TH-AGVFVIDLASKKVIH-HYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRK-FNQYEGFCSNTIN 542 (781)
T ss_dssp ET-TEEEEEESSSSSCCE-EECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEE-ECTTTTCSCSCEE
T ss_pred EC-CceEEEeCCCCeEEe-cccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEE-ccCCCCCCCCeeE
Confidence 55 668889977643221 11111 111135688888998888665 4443447789887765433 321 234678
Q ss_pred EEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 507 GCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 507 ~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++...+ ++.+.+ ++.+|.|..||
T Consensus 543 ~i~~d~-~g~lWi-~T~~Glv~~~d 565 (781)
T 3v9f_A 543 QIYRSS-KGQMWL-ATGEGLVCFPS 565 (781)
T ss_dssp EEEECT-TSCEEE-EETTEEEEESC
T ss_pred EEEECC-CCCEEE-EECCCceEEEC
Confidence 888777 554444 44466545554
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.10 E-value=0.0016 Score=65.81 Aligned_cols=208 Identities=7% Similarity=-0.042 Sum_probs=130.0
Q ss_pred cCceEEEEEccCC-CEEEEEecCCeEEEEeCCCCcEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc
Q 009597 284 SKAVRDISFCNDG-TKFLTASYDKNIKYWDTETGQVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE 361 (531)
Q Consensus 284 ~~~V~~l~fspdg-~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~ 361 (531)
...+..++|++.+ .++++-...+.|..+++........+..+ ..+..+.+.+. .++++++-...+.|.+.++....
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~--~g~lY~~d~~~~~I~~~~~dg~~ 192 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV--HDKLYWTDSGTSRIEVANLDGAH 192 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETT--TTEEEEEETTTTEEEECBTTSCS
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeC--CCeEEEEcCCCCeEEEEeCCCCc
Confidence 3457899999754 44555556788999998876544443322 23444555543 34677777778889999887554
Q ss_pred eeEEEcccCCCeeEEEEecCCCEEEEEe-CC-CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEE-EcCCeEE
Q 009597 362 ITQEYDQHLGAVNTITFVDSNRRFVTSS-DD-KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQ-SLDNQIL 438 (531)
Q Consensus 362 ~~~~~~~h~~~I~~l~~sp~~~~l~s~s-~D-g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~-s~Dg~I~ 438 (531)
....+.........|++.|.+..|+.+. .. +.|..+++........+ .........++++|++..|..+ +..+.|.
T Consensus 193 ~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~~~~~PnGlavd~~~~~lY~aD~~~~~I~ 271 (386)
T 3v65_B 193 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIE 271 (386)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSSCSCEEEEEEEGGGTEEEEEETTTTEEE
T ss_pred eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE-ECCCCCeeeEEEeCCCCEEEEEECCCCEEE
Confidence 4444444456778999998766655544 34 67888887654333222 2234456789999866655554 4557899
Q ss_pred EEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec
Q 009597 439 IYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500 (531)
Q Consensus 439 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 500 (531)
.+++....... .+... ......|++ ..+.++++-...+.|..++..+++.+..+..
T Consensus 272 ~~d~dG~~~~~---~~~~~--~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 272 RANLDGSHRKA---VISQG--LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp EECTTSCSCEE---EECSS--CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEeCCCCeeEE---EEECC--CCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 99986532211 11111 123455777 3455556666778899999777766666543
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.10 E-value=0.0067 Score=61.59 Aligned_cols=211 Identities=6% Similarity=-0.076 Sum_probs=129.9
Q ss_pred CccCceEEEEEccCCCE-EEEEecCCeEEEEeCCCC----cEEEEcc-CCCcceEEEEccCCCCCcEEEEeeCCCeEEEE
Q 009597 282 GHSKAVRDISFCNDGTK-FLTASYDKNIKYWDTETG----QVIRTFS-TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 355 (531)
Q Consensus 282 gH~~~V~~l~fspdg~~-l~s~s~Dg~I~vWd~~t~----~~i~~~~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iw 355 (531)
.....+..|+|++.+.. +++-...+.|+.+++... .....+. ....+..+.+.+. .++++++-...+.|.+.
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~--~~~lY~~d~~~~~I~~~ 186 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI--HSNIYWTDSVLGTVSVA 186 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT--TTEEEEEETTTTEEEEE
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec--CCceEEEECCCCeEEEE
Confidence 34567899999985444 445556788999988652 2222222 2234455566553 34677777778899999
Q ss_pred ECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeC--CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-
Q 009597 356 DMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD--DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS- 432 (531)
Q Consensus 356 d~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s- 432 (531)
++........+.........|++.|.+.+|+.+.. .+.|...++........+ .........|++++.+..|..+.
T Consensus 187 ~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~-~~~l~~P~glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 187 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TENIQWPNGITLDLLSGRLYWVDS 265 (400)
T ss_dssp CTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE-CSSCSCEEEEEEETTTTEEEEEET
T ss_pred eCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE-ECCCCceEEEEEEeCCCEEEEEEC
Confidence 98866555445445566889999997666555542 367888888754333333 22345678899998777666654
Q ss_pred cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009597 433 LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499 (531)
Q Consensus 433 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~ 499 (531)
..+.|..+|+...... .+. .....-.....+++. .+.++++-...+.|..+|..+++.+..+.
T Consensus 266 ~~~~I~~~d~dG~~~~-~~~--~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 266 KLHSISSIDVNGGNRK-TIL--EDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp TTTEEEEEETTSCCCE-EEE--ECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred CCCEEEEEeCCCCccE-EEE--eCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 4578999998654322 111 111111224456663 34455555677889999977776665554
No 272
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.08 E-value=0.003 Score=64.21 Aligned_cols=222 Identities=8% Similarity=-0.060 Sum_probs=136.0
Q ss_pred EEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC----ceeEEEcccCCCe
Q 009597 298 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK----EITQEYDQHLGAV 373 (531)
Q Consensus 298 ~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~----~~~~~~~~h~~~I 373 (531)
+|+.+. ...|+..++........+.....+..+.+.+. .+.++++-...+.|+.+++... .....+.......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~--~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETT--TTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeec--cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 444444 46899999887766655555555555666553 3466777777889999998752 2333444345677
Q ss_pred eEEEEecC-CCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc--CCeEEEEEcCCcceece
Q 009597 374 NTITFVDS-NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL--DNQILIYSTRERFQLNK 450 (531)
Q Consensus 374 ~~l~~sp~-~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~--Dg~I~iwd~~~~~~~~~ 450 (531)
..|++.+. ++++++-...+.|.+.++........+.. .......++++|.+.+|+.... .+.|...++........
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~ 240 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 240 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE
Confidence 89999984 44555556678899999886654444432 4455789999997666665543 36888888865322211
Q ss_pred eeeecCCccccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeec--cCCcEEEEEEecCCCCEEEEEeCCCCE
Q 009597 451 KKRFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCKVFRTLKC--HEGVCIGCEWHPLEQSKVATCGWDGLI 527 (531)
Q Consensus 451 ~~~~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~~~~~~~~--h~~~V~~v~~~p~~~~~l~t~s~Dg~I 527 (531)
.... -.....|++++++..|+.++ ..+.|..+|+........+.. .-....++++. ++.++++-...+.|
T Consensus 241 ---~~~~--l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V 313 (400)
T 3p5b_L 241 ---VTEN--IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAI 313 (400)
T ss_dssp ---ECSS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSE
T ss_pred ---EECC--CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeE
Confidence 1111 13467799998877776665 567899999865433222222 22344566663 44555555555666
Q ss_pred Eee
Q 009597 528 KYW 530 (531)
Q Consensus 528 ~iW 530 (531)
..+
T Consensus 314 ~~~ 316 (400)
T 3p5b_L 314 FSA 316 (400)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 273
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.06 E-value=8e-05 Score=81.14 Aligned_cols=232 Identities=13% Similarity=0.073 Sum_probs=127.4
Q ss_pred EEEEcc-CCCEEEEEecCC-----------eEEEEeCCCCcEE--EEccCCCcceE--EEEccCCCCCcEEEEee-CCCe
Q 009597 289 DISFCN-DGTKFLTASYDK-----------NIKYWDTETGQVI--RTFSTGKIPYV--VKLNPDDDKQNILLAGM-SDKK 351 (531)
Q Consensus 289 ~l~fsp-dg~~l~s~s~Dg-----------~I~vWd~~t~~~i--~~~~~~~~~~~--~~~~~~~~~~~~l~sg~-~dg~ 351 (531)
++++.+ +++.++.|+.+. .+.+||..+++.. ..+.......+ ..+.. ++.++++|+ .+..
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~---~g~lyv~GG~~~~~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG---NGQIVVTGGNDAKK 266 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT---TSCEEEECSSSTTC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC---CCCEEEeCCCCCCc
Confidence 556667 888888887643 5889999887642 22222222222 33333 336788877 4568
Q ss_pred EEEEECCCCceeEEEcccCCC-eeEEEEecCCCEEEEEe-CC-----CCEEEEEcCCCeEEEEee---CCCCCCccEEEE
Q 009597 352 IVQWDMNTKEITQEYDQHLGA-VNTITFVDSNRRFVTSS-DD-----KSLRVWEFGIPVVIKYIS---EPHMHSMPSISL 421 (531)
Q Consensus 352 I~iwd~~t~~~~~~~~~h~~~-I~~l~~sp~~~~l~s~s-~D-----g~I~iwd~~~~~~~~~~~---~~~~~~v~~v~~ 421 (531)
+.+||..+.+-...-..+... -.+++..++++.++.|+ .+ ..+.+||..+......-. .+....-....+
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence 999999876543322222222 23556667899999998 44 569999998876443210 000000001122
Q ss_pred eCCCCEEEEEEcCC---------eEEEEEcCCcceeceeeeecC----CccccceEEEEEc-CCCCEEEEEeCCC-----
Q 009597 422 HPNTNWLAAQSLDN---------QILIYSTRERFQLNKKKRFAG----HIVAGYACQVNFS-PDGRFVMSGDGEG----- 482 (531)
Q Consensus 422 sp~~~~l~s~s~Dg---------~I~iwd~~~~~~~~~~~~~~~----~~~~~~v~~l~~s-pdg~~l~sgs~dg----- 482 (531)
..++..++.++.+| .+..||..+..-......... .........+.|. .++++++.|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 34556666665554 467788766532211111110 0001112334444 3788888887542
Q ss_pred ------cEEEEECCCCeEEEEe--eccCCc-EEEEEEecCCCCEEEEEeCC
Q 009597 483 ------KCWFWDWKSCKVFRTL--KCHEGV-CIGCEWHPLEQSKVATCGWD 524 (531)
Q Consensus 483 ------~I~iwd~~~~~~~~~~--~~h~~~-V~~v~~~p~~~~~l~t~s~D 524 (531)
.|.+||..+....... ..+... -.+++..| ++.+++.||.+
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~-~g~i~v~GG~~ 476 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLP-DGSTFITGGQR 476 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECT-TSCEEEECCBS
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECC-CCCEEEECCcc
Confidence 6788888776544432 222222 23445667 77888888864
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.03 E-value=0.00054 Score=75.78 Aligned_cols=199 Identities=11% Similarity=0.117 Sum_probs=107.8
Q ss_pred CccC-ceEEEEEc-cCCCEEEEEec-CC----eEEEEeCCCC-cEEEE-ccCCCcceEEEEccCCCCCcEEEEeeCC---
Q 009597 282 GHSK-AVRDISFC-NDGTKFLTASY-DK----NIKYWDTETG-QVIRT-FSTGKIPYVVKLNPDDDKQNILLAGMSD--- 349 (531)
Q Consensus 282 gH~~-~V~~l~fs-pdg~~l~s~s~-Dg----~I~vWd~~t~-~~i~~-~~~~~~~~~~~~~~~~~~~~~l~sg~~d--- 349 (531)
+|.- .+...+|| |||++|+-+.. +| +|+++|+.++ +.+.. +. .......|+++ +..++++....
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~--~~~~~~~WspD--g~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS--GTNGEIVWGPD--HTSLFYVTKDETLR 245 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE--EECSCCEECSS--TTEEEEEEECTTCC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc--CceeeEEEecC--CCEEEEEEECCCCC
Confidence 4443 68899999 99998874432 22 5999999998 63211 10 01112344443 33444443321
Q ss_pred -CeEEEEECCCCce--eEEEc-ccCCCeeEEEEecCCCEEEEEeC---CCCEEEEEcCCCe-EE--EEeeCCCCCCccEE
Q 009597 350 -KKIVQWDMNTKEI--TQEYD-QHLGAVNTITFVDSNRRFVTSSD---DKSLRVWEFGIPV-VI--KYISEPHMHSMPSI 419 (531)
Q Consensus 350 -g~I~iwd~~t~~~--~~~~~-~h~~~I~~l~~sp~~~~l~s~s~---Dg~I~iwd~~~~~-~~--~~~~~~~~~~v~~v 419 (531)
..|+++++.++.. +..+. ........+.|+|++++|+..+. ...|.++|+.++. .. ..+.........++
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~ 325 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV 325 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEE
Confidence 3688889887642 23332 22344678899999998876653 3358888987652 12 33433233444555
Q ss_pred EEeCCCCEEEEEE-cC----CeEEEEEcCCcceeceeee-ecCCccccceEEEEEcCCCCEEEEEeCCCc--EEEEEC
Q 009597 420 SLHPNTNWLAAQS-LD----NQILIYSTRERFQLNKKKR-FAGHIVAGYACQVNFSPDGRFVMSGDGEGK--CWFWDW 489 (531)
Q Consensus 420 ~~sp~~~~l~s~s-~D----g~I~iwd~~~~~~~~~~~~-~~~~~~~~~v~~l~~spdg~~l~sgs~dg~--I~iwd~ 489 (531)
.|+. +..|+..+ .+ ..|.++++.+.... .. +..+.....+..+.+. .+.++++...+|. |+++++
T Consensus 326 ~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~---~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 326 QMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDW---SHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEET-TTEEEEEECTTTCTTCEEEEEETTSTTCC---CCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred eeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccc---eeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 5554 55554444 33 26777776542111 11 1112112234445554 2344556666775 556675
No 275
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.02 E-value=0.0022 Score=62.47 Aligned_cols=208 Identities=13% Similarity=0.060 Sum_probs=117.8
Q ss_pred CCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCC--
Q 009597 315 TGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDK-- 392 (531)
Q Consensus 315 t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg-- 392 (531)
..+.+..|..+..+..+.+.+. ++++++-..++.|..||.... ....+. ......+|++.++++++++.....
T Consensus 21 ~~~~~~~~p~~~~pegia~~~~---g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~ 95 (306)
T 2p4o_A 21 PAKIITSFPVNTFLENLASAPD---GTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSI 95 (306)
T ss_dssp CEEEEEEECTTCCEEEEEECTT---SCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSC
T ss_pred CceEeEeCCCCCCcceEEECCC---CCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcc
Confidence 3445566655555556666552 356667667899999998753 333333 235688999999999766654433
Q ss_pred CEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcc-eeceeee-e---cCCccccceEEEE
Q 009597 393 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERF-QLNKKKR-F---AGHIVAGYACQVN 467 (531)
Q Consensus 393 ~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~-~~~~~~~-~---~~~~~~~~v~~l~ 467 (531)
.|..+|..++........+.......++..+.+..+++-..++.|.++|...+. .+..... + .....-...+.+
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 366677777665433332222233445555555444444458899999976531 1110000 0 000001123445
Q ss_pred EcCCCCEEEEEe-CCCcEEEEECCC-CeE--EEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 468 FSPDGRFVMSGD-GEGKCWFWDWKS-CKV--FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 468 ~spdg~~l~sgs-~dg~I~iwd~~~-~~~--~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++++.+|+.+. ..+.|+++++.. ++. ...+.. ......+++.+ ++.++++....+.|.++|
T Consensus 175 -s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~-dG~l~va~~~~~~V~~~~ 239 (306)
T 2p4o_A 175 -KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDV-EGNLYGATHIYNSVVRIA 239 (306)
T ss_dssp -EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBT-TCCEEEECBTTCCEEEEC
T ss_pred -CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECC-CCCEEEEeCCCCeEEEEC
Confidence 78887766554 567899999864 321 111111 12345678888 566666665567787765
No 276
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.02 E-value=0.011 Score=57.49 Aligned_cols=229 Identities=10% Similarity=0.094 Sum_probs=147.6
Q ss_pred EEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC-CceeEEEcc
Q 009597 290 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT-KEITQEYDQ 368 (531)
Q Consensus 290 l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t-~~~~~~~~~ 368 (531)
.-.+|..+.||.=. ..++.|+|+++.+.++.+.... .++.|.|.++. .|+..+ +..|+.|++.. ..+++.+..
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e--~VvfWkWis~~--~L~lVT-~taVyHWs~~~~s~P~kvFdR 145 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD--DVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDR 145 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS--CEEEEEECSSS--EEEEEE-SSEEEEEESSTTCCCEEEEEC
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC--ccEEEEecCCC--eEEEEc-CCcEEEEcccCCCCCceeeec
Confidence 34588877666555 6799999999999999887765 45566665553 343333 56899999974 467777776
Q ss_pred cC----CCeeEEEEecCCCEEEEEeC-------CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeC--C-CCEEEEEEcC
Q 009597 369 HL----GAVNTITFVDSNRRFVTSSD-------DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP--N-TNWLAAQSLD 434 (531)
Q Consensus 369 h~----~~I~~l~~sp~~~~l~s~s~-------Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp--~-~~~l~s~s~D 434 (531)
|. ..|-....+++.++++..+- .|.+.+|..+.... ...++|......+.+.- . ..+|+.+...
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s--Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~ 223 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--QPIEGHAASFAQFKMEGNAEESTLFCFAVRG 223 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE--EEECCSEEEEEEECCTTCSSCEEEEEEEEEE
T ss_pred chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc--ceeeeeeeeeEEEecCCCCCCceEEEEEEec
Confidence 64 35666777888888776542 36788999877643 22233433332222211 1 1233433332
Q ss_pred ---CeEEEEEcCCc---ceecee---e-eecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCc
Q 009597 435 ---NQILIYSTRER---FQLNKK---K-RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 504 (531)
Q Consensus 435 ---g~I~iwd~~~~---~~~~~~---~-~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~ 504 (531)
++++|.++... ...... . .+..........++..|+.-..+..-+.-|.|++||+.++.++..-+-....
T Consensus 224 ~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~ 303 (365)
T 2xzh_A 224 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 303 (365)
T ss_dssp TTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred CCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCc
Confidence 58899988442 111001 1 1222223455667889998889999999999999999999999988877777
Q ss_pred EEEEEEecCCCCEEEEEeCCCCE
Q 009597 505 CIGCEWHPLEQSKVATCGWDGLI 527 (531)
Q Consensus 505 V~~v~~~p~~~~~l~t~s~Dg~I 527 (531)
|...+-+. ...-++.....|.|
T Consensus 304 iF~ta~~~-~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 304 IFVTAPHE-ATAGIIGVNRKGQV 325 (365)
T ss_dssp EEEEEEEG-GGTEEEEEETTCEE
T ss_pred eEEecccC-CCCcEEEEcCCCEE
Confidence 77766665 33334445566654
No 277
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.97 E-value=0.0017 Score=63.95 Aligned_cols=196 Identities=9% Similarity=0.185 Sum_probs=125.6
Q ss_pred eEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecC----CC---EEEEEe-C--CCCEEEEE
Q 009597 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS----NR---RFVTSS-D--DKSLRVWE 398 (531)
Q Consensus 329 ~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~----~~---~l~s~s-~--Dg~I~iwd 398 (531)
..+-+++..+...+++.....+-+.+||+ +++.++.+.. +.++.+..-|. ++ +++++. . +++|++|+
T Consensus 29 pavw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~ 105 (355)
T 3amr_A 29 PAIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYA 105 (355)
T ss_dssp EEEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEE
T ss_pred ccEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEE
Confidence 34455565555567888888899999999 8888888854 67888887773 22 223333 3 57899997
Q ss_pred cC--CCeEEEEeeC---C--C-CCCccEEEE--eCC-CC-EEEEEEcCCeEEEEEcCC---c-ceeceeeeecCCccccc
Q 009597 399 FG--IPVVIKYISE---P--H-MHSMPSISL--HPN-TN-WLAAQSLDNQILIYSTRE---R-FQLNKKKRFAGHIVAGY 462 (531)
Q Consensus 399 ~~--~~~~~~~~~~---~--~-~~~v~~v~~--sp~-~~-~l~s~s~Dg~I~iwd~~~---~-~~~~~~~~~~~~~~~~~ 462 (531)
+. +.. +..+.. + . ...+..+|+ +|. +. ++++...+|.+..|++.. + ..-..++.+.. .+.
T Consensus 106 iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l---gsq 181 (355)
T 3amr_A 106 IDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM---NSQ 181 (355)
T ss_dssp ECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC---SSC
T ss_pred ECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC---CCC
Confidence 73 333 444422 1 1 256777888 664 44 688888899999998843 1 11122333332 234
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECC-----CCeEEEEee-cc-CCcEEEEEEecC--CCCEEEEEe-CCCCEEeeC
Q 009597 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWK-----SCKVFRTLK-CH-EGVCIGCEWHPL--EQSKVATCG-WDGLIKYWD 531 (531)
Q Consensus 463 v~~l~~spdg~~l~sgs~dg~I~iwd~~-----~~~~~~~~~-~h-~~~V~~v~~~p~--~~~~l~t~s-~Dg~I~iWD 531 (531)
+-.|...+....|+.+-++.-|+.++.. +++.+..+. +| ...+..+++.+. +..+|++++ .++++.+||
T Consensus 182 ~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 182 TEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred cceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 6668888988999999998778888865 456666553 22 235788888542 222444444 566777775
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.94 E-value=0.0018 Score=63.74 Aligned_cols=206 Identities=9% Similarity=-0.027 Sum_probs=125.9
Q ss_pred CceEEEEEccC-CCEEEEEecCCeEEEEeCCCCcEE-EEc-cCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc
Q 009597 285 KAVRDISFCND-GTKFLTASYDKNIKYWDTETGQVI-RTF-STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE 361 (531)
Q Consensus 285 ~~V~~l~fspd-g~~l~s~s~Dg~I~vWd~~t~~~i-~~~-~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~ 361 (531)
..+..|+|.+. +.++++-...+.|..+++..+... ..+ ..-..+..+.+.+. .++++++-...+.|.++++....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~--~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL--GEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT--TTEEEEEETTTTEEEEEETTSCS
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC--CCeEEEEECCCCEEEEEECCCCc
Confidence 35678999985 555556566788999998765321 111 11233445555543 34677777778899999987554
Q ss_pred eeEEEcccCCCeeEEEEecCCCEEEEEeC--CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEE
Q 009597 362 ITQEYDQHLGAVNTITFVDSNRRFVTSSD--DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS-LDNQIL 438 (531)
Q Consensus 362 ~~~~~~~h~~~I~~l~~sp~~~~l~s~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~ 438 (531)
....+.........|++.|.+..|+.+.. .+.|...++........+ .........++++|++..|..+. ..+.|.
T Consensus 113 ~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 113 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII-NSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE-ECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 43334445567789999997666655542 567888887643322222 22344567899999666665554 567899
Q ss_pred EEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009597 439 IYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499 (531)
Q Consensus 439 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~ 499 (531)
.+++....... + ..+. ......+++.. +.++++-...+.|..++..+++....+.
T Consensus 192 ~~d~dG~~~~~-~--~~~~--~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 192 KSNLDGTNRQA-V--VKGS--LPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEETTSCSCEE-E--ECSC--CSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEcCCCCceEE-E--ecCC--CCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 99986532211 1 1111 12345566653 3455555567889999987776554443
No 279
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.94 E-value=0.0053 Score=68.04 Aligned_cols=234 Identities=14% Similarity=0.012 Sum_probs=137.9
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEcc-------C------CCcceEEEEccCCCCCcEEEEeeCCC
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS-------T------GKIPYVVKLNPDDDKQNILLAGMSDK 350 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~-------~------~~~~~~~~~~~~~~~~~~l~sg~~dg 350 (531)
...|.+|...++|. |..|+..+-|.+++..++....... . -....+.++..+.. ..|..|+.++
T Consensus 257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~--g~lWigt~~~ 333 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSF--NNIWIGTWGG 333 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSS--CCEEEEEBSS
T ss_pred CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCC--CCEEEEecCC
Confidence 35799999988886 6667765678899987765432211 0 01123444444433 2477788778
Q ss_pred eEEEEECCCCceeEEEc---------ccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEee--CCCCCCccEE
Q 009597 351 KIVQWDMNTKEITQEYD---------QHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYIS--EPHMHSMPSI 419 (531)
Q Consensus 351 ~I~iwd~~t~~~~~~~~---------~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~--~~~~~~v~~v 419 (531)
-|..++..+........ .....|.++...+++. |..|+.++-|.+||..+........ ......|.++
T Consensus 334 Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i 412 (781)
T 3v9f_A 334 GINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS 412 (781)
T ss_dssp CEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEE
T ss_pred eEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE
Confidence 89999887654332211 1235688888887776 4556656669999987543322111 1133568888
Q ss_pred EEeCCCCEEEEEEcCCeEEEEEcCCcceeceeeeecC-CccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q 009597 420 SLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG-HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498 (531)
Q Consensus 420 ~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~ 498 (531)
...+++.+ .+|+.++-|..|+..++... .+.. ......|.++...++|.+. .|+. +-|.++|..+++.....
T Consensus 413 ~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~----~~~~~~~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 413 LKDSEGNL-WFGTYLGNISYYNTRLKKFQ----IIELEKNELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVIHHY 485 (781)
T ss_dssp EECTTSCE-EEEETTEEEEEECSSSCEEE----ECCSTTTCCCCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCCEEE
T ss_pred EECCCCCE-EEEeccCCEEEEcCCCCcEE----EeccCCCCCCeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEEecc
Confidence 88877764 45677778899988664321 1111 1123457788888888655 4555 56889998876543332
Q ss_pred ecc-----CCcEEEEEEecCCCCEEEEEeC-CCCEEeeC
Q 009597 499 KCH-----EGVCIGCEWHPLEQSKVATCGW-DGLIKYWD 531 (531)
Q Consensus 499 ~~h-----~~~V~~v~~~p~~~~~l~t~s~-Dg~I~iWD 531 (531)
... ...|.++...+ ++.+. .|+. .| |..||
T Consensus 486 ~~~~~~~~~~~i~~i~~d~-~g~lW-igt~~~G-l~~~~ 521 (781)
T 3v9f_A 486 DTSNSQLLENFVRSIAQDS-EGRFW-IGTFGGG-VGIYT 521 (781)
T ss_dssp CTTTSSCSCSCEEEEEECT-TCCEE-EEESSSC-EEEEC
T ss_pred cCcccccccceeEEEEEcC-CCCEE-EEEcCCC-EEEEe
Confidence 222 35688888877 55444 4444 44 44443
No 280
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.93 E-value=0.0032 Score=61.65 Aligned_cols=197 Identities=13% Similarity=0.104 Sum_probs=112.8
Q ss_pred CceEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEEcc--CC---CcceEEEEccCCCCCcEEEEeeC----------
Q 009597 285 KAVRDISFCN-DGTKFLTASYDKNIKYWDTETGQVIRTFS--TG---KIPYVVKLNPDDDKQNILLAGMS---------- 348 (531)
Q Consensus 285 ~~V~~l~fsp-dg~~l~s~s~Dg~I~vWd~~t~~~i~~~~--~~---~~~~~~~~~~~~~~~~~l~sg~~---------- 348 (531)
..+.+|++.+ +++ |+.+...+.|..+|..++....... .+ ..+..+.+.+ ..++++++-..
T Consensus 80 ~~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~--~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 80 GRTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQ--RTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp CCEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECT--TTCCEEEEESCSSCCTTCHHH
T ss_pred CCCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEec--CCCEEEEECCcccccccccce
Confidence 3578999997 665 5556555668888877654221111 11 1123333333 12345555322
Q ss_pred -------CCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEE-eCCCCEEEEEcCCCe--EEEEeeCCCCCCccE
Q 009597 349 -------DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTS-SDDKSLRVWEFGIPV--VIKYISEPHMHSMPS 418 (531)
Q Consensus 349 -------dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~-s~Dg~I~iwd~~~~~--~~~~~~~~~~~~v~~ 418 (531)
++.|..||..+++...... .....+.|+++++++.|+.+ +..+.|.+|++.... ....+.. ... ...
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~g 233 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGN 233 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEE
T ss_pred ehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCC
Confidence 3778899987776433222 22445789999999866555 556889999987421 1111111 122 677
Q ss_pred EEEeCCCCEEEEEEc----------CCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 009597 419 ISLHPNTNWLAAQSL----------DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 488 (531)
Q Consensus 419 v~~sp~~~~l~s~s~----------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd 488 (531)
+++.++|+++++... .+.|..+|.. +..+..+....+.. ...+..+++ .++.++++....+.|.+++
T Consensus 234 i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~-~~~~~~~~~-~~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFA-GEHFEQIQE-HDGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTT-TSCCCEEEE-ETTEEEEECSSCSEEEEEE
T ss_pred eEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCc-cccceEEEE-eCCEEEEeecCCCceEEEe
Confidence 899999987777655 4678888864 33333222222211 123444555 3566555555677888888
Q ss_pred CC
Q 009597 489 WK 490 (531)
Q Consensus 489 ~~ 490 (531)
+.
T Consensus 311 ~~ 312 (322)
T 2fp8_A 311 YD 312 (322)
T ss_dssp C-
T ss_pred cc
Confidence 65
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.88 E-value=0.0028 Score=62.22 Aligned_cols=216 Identities=9% Similarity=-0.020 Sum_probs=124.9
Q ss_pred CCeEEEEeCCCCc--EEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCce-eEEEcccCCCeeEEEEecC
Q 009597 305 DKNIKYWDTETGQ--VIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI-TQEYDQHLGAVNTITFVDS 381 (531)
Q Consensus 305 Dg~I~vWd~~t~~--~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~-~~~~~~h~~~I~~l~~sp~ 381 (531)
...|+..++.... ....+.....+..+.+.+ ..+.++++-...+.|..+++..... ...+.........+++.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~--~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 89 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEG--GGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEe--CCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC
Confidence 4578889987653 222222222233344443 3446777777788999999876642 2223333355678999975
Q ss_pred CC-EEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc--CCeEEEEEcCCcceeceeeeecCCc
Q 009597 382 NR-RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL--DNQILIYSTRERFQLNKKKRFAGHI 458 (531)
Q Consensus 382 ~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~ 458 (531)
+. ++++-...+.|.++++....... +..........++++|.+..|+.... .+.|..+++....... + ....
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~~~~~-l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~-~--~~~~- 164 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGSLRKV-LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI-I--INSE- 164 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEE-EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE-E--ECSS-
T ss_pred CCeEEEEECCCCEEEEEECCCCcEEE-EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE-E--EECC-
Confidence 54 45555567789999987643322 22234456789999997666665553 5788888876432211 1 1111
Q ss_pred cccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 459 VAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 459 ~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
-.....|++++++..|+.++ ..+.|..+|+........+........++++.. +.++++-...+.|..+
T Consensus 165 -l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 165 -IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILAC 234 (318)
T ss_dssp -CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET--TEEEEEETTTTEEEEE
T ss_pred -CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC--CEEEEEecCCCeEEEE
Confidence 13466799999776666554 567899999864322222222333456666643 3444444344555443
No 282
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.83 E-value=0.0063 Score=59.98 Aligned_cols=199 Identities=14% Similarity=0.237 Sum_probs=124.9
Q ss_pred CCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEcc----CCCCCcEEEEeeC---CCeEEEEEC--CCCceeEE
Q 009597 295 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNP----DDDKQNILLAGMS---DKKIVQWDM--NTKEITQE 365 (531)
Q Consensus 295 dg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~----~~~~~~~l~sg~~---dg~I~iwd~--~t~~~~~~ 365 (531)
...+++.....+-|.+||+ +|+.+..+..+.. .-+.+.+ ....-.++++... +++|.+|++ .++. +..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~-nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNTGKL-NNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECCSCE-EEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccCCCc-ccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 3456666677789999999 8999988865432 2233322 1111113344443 579999977 3333 444
Q ss_pred Ecc-------cCCCeeEEEE--ecC-CC-EEEEEeCCCCEEEEEcC-------CCeEEEEeeCCCCCCccEEEEeCCCCE
Q 009597 366 YDQ-------HLGAVNTITF--VDS-NR-RFVTSSDDKSLRVWEFG-------IPVVIKYISEPHMHSMPSISLHPNTNW 427 (531)
Q Consensus 366 ~~~-------h~~~I~~l~~--sp~-~~-~l~s~s~Dg~I~iwd~~-------~~~~~~~~~~~~~~~v~~v~~sp~~~~ 427 (531)
+.. ....+..+++ ++. ++ ++++...+|.+..|++. +.+.++.+.. ...+-.+...+....
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l--gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM--NSQTEGMAADDEYGR 193 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC--SSCEEEEEEETTTTE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC--CCCcceEEEcCCCCe
Confidence 421 1145666777 664 44 57788889999999883 2355666654 356778889998899
Q ss_pred EEEEEcCCeEEEEEcCCcc--eeceeeeec-CCccccceEEEEE--cCCCC-EEEEEe-CCCcEEEEECC-CCeEEEEee
Q 009597 428 LAAQSLDNQILIYSTRERF--QLNKKKRFA-GHIVAGYACQVNF--SPDGR-FVMSGD-GEGKCWFWDWK-SCKVFRTLK 499 (531)
Q Consensus 428 l~s~s~Dg~I~iwd~~~~~--~~~~~~~~~-~~~~~~~v~~l~~--spdg~-~l~sgs-~dg~I~iwd~~-~~~~~~~~~ 499 (531)
|+++-.+.-|..|+..-.. ....+..+. ++. ...+-.|++ .++++ ||++++ .+..+.+||.. +.+.+..|.
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l-~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHL-TRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSB-CSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCcc-ccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 9999999888778855211 111122222 222 223566776 55655 666665 67799999996 777777774
No 283
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.83 E-value=0.0063 Score=63.21 Aligned_cols=240 Identities=10% Similarity=-0.002 Sum_probs=134.7
Q ss_pred ceEEEEEcc-CCCEEEEEe-cCCeEEEEeCCCCcEEEEccCCC----cceEEEE-------ccCCCCCcEEEEeeCCC--
Q 009597 286 AVRDISFCN-DGTKFLTAS-YDKNIKYWDTETGQVIRTFSTGK----IPYVVKL-------NPDDDKQNILLAGMSDK-- 350 (531)
Q Consensus 286 ~V~~l~fsp-dg~~l~s~s-~Dg~I~vWd~~t~~~i~~~~~~~----~~~~~~~-------~~~~~~~~~l~sg~~dg-- 350 (531)
....|+|+| +...|+.+. ..+.|++.|++++.+...+.... .+..+.+ ... ...++++-..++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~--G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADE--AEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCT--TCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCC--CCEEEEEeCCCCCc
Confidence 467889998 344455444 34679999998877766554432 2455555 443 223555544442
Q ss_pred ----eEEEEECCC-Ccee-----EEEcccCCCeeEEEEecC-CCEEEEEeCCCCEEEEEcC-------CCeE--------
Q 009597 351 ----KIVQWDMNT-KEIT-----QEYDQHLGAVNTITFVDS-NRRFVTSSDDKSLRVWEFG-------IPVV-------- 404 (531)
Q Consensus 351 ----~I~iwd~~t-~~~~-----~~~~~h~~~I~~l~~sp~-~~~l~s~s~Dg~I~iwd~~-------~~~~-------- 404 (531)
.|.+++... +... +.+.. ......++++|+ +.++++-..++.|..+|+. ++..
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred ccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 366776443 2221 22322 234567889994 5556666677889999987 4432
Q ss_pred ---EEE-eeCCCCCCccEEEEeCCCCEEEEE-EcCCeEEEEEcCCcc-eeceeeeecC------Cc-------cccceE-
Q 009597 405 ---IKY-ISEPHMHSMPSISLHPNTNWLAAQ-SLDNQILIYSTRERF-QLNKKKRFAG------HI-------VAGYAC- 464 (531)
Q Consensus 405 ---~~~-~~~~~~~~v~~v~~sp~~~~l~s~-s~Dg~I~iwd~~~~~-~~~~~~~~~~------~~-------~~~~v~- 464 (531)
... +..+.......++|+|++++|..+ +..+.|+.++..... .+.....+.+ .. .-....
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 112 222334456789999999965554 456788886654321 1100011111 10 001133
Q ss_pred EEEEc-------CCCCEEEEEeCCCcEEEEECCCCeEEEEeecc------------------------CCcEEEEEEecC
Q 009597 465 QVNFS-------PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH------------------------EGVCIGCEWHPL 513 (531)
Q Consensus 465 ~l~~s-------pdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h------------------------~~~V~~v~~~p~ 513 (531)
.++.. ++|.++++-.....|+.++ .++. +.++.+. -.....|++.+.
T Consensus 377 gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 34444 4666676667788999998 5664 3444321 013578999984
Q ss_pred CCCEEEEEeCCCCEEee
Q 009597 514 EQSKVATCGWDGLIKYW 530 (531)
Q Consensus 514 ~~~~l~t~s~Dg~I~iW 530 (531)
++.++++=.....|+.+
T Consensus 455 ~g~lyVaD~~N~rIrki 471 (496)
T 3kya_A 455 KEMFYVHDQVGHTIRTI 471 (496)
T ss_dssp TTEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCEEEEE
Confidence 36566655556677765
No 284
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.82 E-value=0.0016 Score=61.64 Aligned_cols=166 Identities=9% Similarity=0.057 Sum_probs=105.9
Q ss_pred EEcccCCCeeEEEEecCCCEE-EEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcC
Q 009597 365 EYDQHLGAVNTITFVDSNRRF-VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 443 (531)
Q Consensus 365 ~~~~h~~~I~~l~~sp~~~~l-~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~ 443 (531)
.+.+-...+..++|+|++..| ++...++.|...|.. +..+..+........-.+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 344555679999999976654 557778889999998 777777754444667789999888776665567889999876
Q ss_pred Ccceeceeeee--c--CCccccceEEEEEcCCCCEEEEEeCCCcEEEEECC---CCeEEEEee-------ccCCcEEEEE
Q 009597 444 ERFQLNKKKRF--A--GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK---SCKVFRTLK-------CHEGVCIGCE 509 (531)
Q Consensus 444 ~~~~~~~~~~~--~--~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~---~~~~~~~~~-------~h~~~V~~v~ 509 (531)
....+...... . ........-.++|+|.+..|+++.......||.+. ....+..+. .+-..+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 54432111111 1 11223336779999999877777765555555443 111122221 1223568999
Q ss_pred EecCCCCEEEEEeCCCCEEeeC
Q 009597 510 WHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 510 ~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
++|..+.+++.......|.++|
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d 201 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVT 201 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEc
Confidence 9996666666666666666554
No 285
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.82 E-value=0.00085 Score=74.23 Aligned_cols=174 Identities=13% Similarity=0.078 Sum_probs=98.4
Q ss_pred eEEEEECCCC-ceeEE-EcccCCCeeEEEEecCCCEEEEEeCC-----CCEEEEEcCCCe--EEEEeeCCCCCCccEEEE
Q 009597 351 KIVQWDMNTK-EITQE-YDQHLGAVNTITFVDSNRRFVTSSDD-----KSLRVWEFGIPV--VIKYISEPHMHSMPSISL 421 (531)
Q Consensus 351 ~I~iwd~~t~-~~~~~-~~~h~~~I~~l~~sp~~~~l~s~s~D-----g~I~iwd~~~~~--~~~~~~~~~~~~v~~v~~ 421 (531)
.|+++|+.++ +.+.. +. .....+.|+|+++.|+....| ..|.++++.++. ....+..........+.|
T Consensus 202 ~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~ 278 (751)
T 2xe4_A 202 TIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYK 278 (751)
T ss_dssp EEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEE
T ss_pred EEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEE
Confidence 5999999988 63211 11 124578999999988877765 257888887753 122222223344567899
Q ss_pred eCCCCEEEEEEcC---CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC----CcEEEEECCCCeE
Q 009597 422 HPNTNWLAAQSLD---NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE----GKCWFWDWKSCKV 494 (531)
Q Consensus 422 sp~~~~l~s~s~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d----g~I~iwd~~~~~~ 494 (531)
+|+|++|+..+.+ ..|.++|+.++........+.... ......+.|+.++.+++....+ ..|..+|+.++..
T Consensus 279 SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~ 357 (751)
T 2xe4_A 279 AADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE-KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSD 357 (751)
T ss_dssp CTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC-TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTC
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC-CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCccc
Confidence 9999998877643 468888887642100001111111 1223334544444444554443 3677788765322
Q ss_pred EEE-eeccCC--cEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 495 FRT-LKCHEG--VCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 495 ~~~-~~~h~~--~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
... +..|.. .+..+.+. ++.++++...+|..+||
T Consensus 358 ~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 358 WSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp CCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEE
T ss_pred ceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEE
Confidence 222 333433 34444443 45677777778865554
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.81 E-value=0.012 Score=65.03 Aligned_cols=210 Identities=6% Similarity=-0.080 Sum_probs=128.3
Q ss_pred ccCceEEEEEccC-CCEEEEEecCCeEEEEeCCCC----cEEEEcc-CCCcceEEEEccCCCCCcEEEEeeCCCeEEEEE
Q 009597 283 HSKAVRDISFCND-GTKFLTASYDKNIKYWDTETG----QVIRTFS-TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 356 (531)
Q Consensus 283 H~~~V~~l~fspd-g~~l~s~s~Dg~I~vWd~~t~----~~i~~~~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd 356 (531)
....+..|+|.+. +.++++-...+.|+.+++... .....+. ....+..+.+.+.. ++++++-...+.|.+.+
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~--~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH--SNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT--TEEEEEETTTTEEEEEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecC--CcEEEEecCCCeEEEEe
Confidence 4456789999984 445556566788999988653 2222232 23445566666643 36777878889999999
Q ss_pred CCCCceeEEEcccCCCeeEEEEecCCCEEEEEeC-C-CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-c
Q 009597 357 MNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD-D-KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS-L 433 (531)
Q Consensus 357 ~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~-D-g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~ 433 (531)
+........+.........|++.|.+.+|+.+.. . +.|.+.++........+ .........|++++.+..|+.+. .
T Consensus 500 ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv-~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 500 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp TTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-CSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE-eCCCCCceEEEEecCCCeEEEEeCC
Confidence 9865544444445566889999997666555542 3 67888888765443333 33445678999998666666554 4
Q ss_pred CCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009597 434 DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499 (531)
Q Consensus 434 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~ 499 (531)
.+.|..+++........ ......-.....|++.. +.++++-...+.|...|..+++.+..+.
T Consensus 579 ~~~I~~~d~dG~~~~~v---~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 579 LHSISSIDVNGGNRKTI---LEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp TTEEEEEETTSCSCEEE---EECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCcEEEEecCCCceEEE---ecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 56899999865433211 11111112233466533 2344444466788888877776555553
No 287
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.80 E-value=0.039 Score=55.65 Aligned_cols=230 Identities=10% Similarity=0.101 Sum_probs=148.7
Q ss_pred EEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC-CceeEEEc
Q 009597 289 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT-KEITQEYD 367 (531)
Q Consensus 289 ~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t-~~~~~~~~ 367 (531)
+.-.+|..+.||.=. ..++.|+|+++.+.++.+.....+. .|.|.++ +.|+..+ +..|+.|++.. ..+++.+.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~Vv--fWkWis~--~~l~lVT-~taVyHWsi~~~s~P~kvFd 143 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVT--FWKWISL--NTVALVT-DNAVYHWSMEGESQPVKMFD 143 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCC--EEEEEET--TEEEEEC-SSEEEEEESSSSCCCEEEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCce--EEEecCC--CeEEEEc-CCeeEEecccCCCCchhhee
Confidence 344678777666554 6799999999999999987766544 3444333 2343333 57899999964 45777777
Q ss_pred ccC----CCeeEEEEecCCCEEEEEeC-------CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCC---CCEEEEEEc
Q 009597 368 QHL----GAVNTITFVDSNRRFVTSSD-------DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN---TNWLAAQSL 433 (531)
Q Consensus 368 ~h~----~~I~~l~~sp~~~~l~s~s~-------Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~---~~~l~s~s~ 433 (531)
.|. ..|-....+++.++++..+- .|.+.+|..+.... ...++|......+.+.-+ ..+|+.+..
T Consensus 144 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s--Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r 221 (494)
T 1bpo_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--QPIEGHAASFAQFKMEGNAEESTLFCFAVR 221 (494)
T ss_dssp CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE--EEECCSEEEEEEEECTTCSSEEEEEEEEEC
T ss_pred cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc--chheeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 664 35666777888888775442 46788998876643 222345443333332211 123444443
Q ss_pred C---CeEEEEEcCCc------ceeceee-eecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCC
Q 009597 434 D---NQILIYSTRER------FQLNKKK-RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 503 (531)
Q Consensus 434 D---g~I~iwd~~~~------~~~~~~~-~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~ 503 (531)
. +.++|.++... +...... .+...........+..|+.-..+..-+.-|.|++||+.++.++..-+-...
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~ 301 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE 301 (494)
T ss_dssp STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCC
Confidence 3 78999988543 1011111 122222345566789999989999999999999999999999988887777
Q ss_pred cEEEEEEecCCCCEEEEEeCCCCE
Q 009597 504 VCIGCEWHPLEQSKVATCGWDGLI 527 (531)
Q Consensus 504 ~V~~v~~~p~~~~~l~t~s~Dg~I 527 (531)
.|...+-+. ...-++.....|.|
T Consensus 302 ~iF~t~~~~-~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 302 TIFVTAPHE-ATAGIIGVNRKGQV 324 (494)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEE
T ss_pred ceEEecccC-CCCcEEEEccCceE
Confidence 777776666 33344445566654
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.76 E-value=0.01 Score=58.03 Aligned_cols=166 Identities=10% Similarity=0.089 Sum_probs=109.3
Q ss_pred ecCccCceEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcEEEE-ccC----CC-cceEEEEccC--CCCCcEEEEee---
Q 009597 280 YMGHSKAVRDISFCNDGTKFLTAS-YDKNIKYWDTETGQVIRT-FST----GK-IPYVVKLNPD--DDKQNILLAGM--- 347 (531)
Q Consensus 280 l~gH~~~V~~l~fspdg~~l~s~s-~Dg~I~vWd~~t~~~i~~-~~~----~~-~~~~~~~~~~--~~~~~~l~sg~--- 347 (531)
+....---.+++|.+....|+.++ ..++|..|+...+..... +.. +. ......+... +..+.++++..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 334444456789988555555555 799999999986654433 221 11 1123444442 22345666543
Q ss_pred ----------CCCeEEEEECC---CCceeEEEcc--c-----------CCCeeEEEEecCCCEEEEEeCC-CCEEEEEcC
Q 009597 348 ----------SDKKIVQWDMN---TKEITQEYDQ--H-----------LGAVNTITFVDSNRRFVTSSDD-KSLRVWEFG 400 (531)
Q Consensus 348 ----------~dg~I~iwd~~---t~~~~~~~~~--h-----------~~~I~~l~~sp~~~~l~s~s~D-g~I~iwd~~ 400 (531)
.+..|..||+. +++.+..... . ....+.++..++|+..++++.- +.|...+..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 26789999999 7877765542 1 1247899999999999999888 887777766
Q ss_pred CCeEEEEe-eC---CCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCc
Q 009597 401 IPVVIKYI-SE---PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 445 (531)
Q Consensus 401 ~~~~~~~~-~~---~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~ 445 (531)
........ .. ......+.|+++|+++.|++....|.|..+|+...
T Consensus 168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 168 GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 44222221 11 12234679999999999998877999999998853
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.74 E-value=0.012 Score=64.92 Aligned_cols=220 Identities=7% Similarity=-0.060 Sum_probs=130.4
Q ss_pred EEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC----ceeEEEcccCCCe
Q 009597 298 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK----EITQEYDQHLGAV 373 (531)
Q Consensus 298 ~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~----~~~~~~~~h~~~I 373 (531)
+|+.+. ...|+..++........+.....+..+.+.+. .+.++++-...+.|+.+++... .....+.......
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~--~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEECSCSSEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred cccccc-ccceeEeeccCCcceeeecCCCceEEEeeccc--CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 344333 45688888877665555544455555555543 3467777777889999998753 3334444455667
Q ss_pred eEEEEecCCCE-EEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc-C-CeEEEEEcCCcceece
Q 009597 374 NTITFVDSNRR-FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL-D-NQILIYSTRERFQLNK 450 (531)
Q Consensus 374 ~~l~~sp~~~~-l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~-D-g~I~iwd~~~~~~~~~ 450 (531)
..|++.+.++. +++-...+.|.+.++........+. ........|+++|...+|+.... . +.|.+.++........
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l 552 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 552 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE
Confidence 88999987754 4555567889999998665433333 24456789999997666665543 2 6888888865432211
Q ss_pred eeeecCCccccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeecc--CCcEEEEEEecCCCCEEEEEeCCCCE
Q 009597 451 KKRFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEWHPLEQSKVATCGWDGLI 527 (531)
Q Consensus 451 ~~~~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~~~~~~~~h--~~~V~~v~~~p~~~~~l~t~s~Dg~I 527 (531)
.... -.....|++++.+..|+.+. ..+.|...++........+... -....+|++.. +.++++-...+.|
T Consensus 553 ---v~~~--l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~--~~lYwtD~~~~~I 625 (791)
T 3m0c_C 553 ---VTEN--IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAI 625 (791)
T ss_dssp ---ECSS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET--TEEEEEETTTTEE
T ss_pred ---EeCC--CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC--CEEEEEECCCCEE
Confidence 1111 13467799998777666665 5568999998654333333321 12345666543 3333333333444
Q ss_pred E
Q 009597 528 K 528 (531)
Q Consensus 528 ~ 528 (531)
.
T Consensus 626 ~ 626 (791)
T 3m0c_C 626 F 626 (791)
T ss_dssp E
T ss_pred E
Confidence 3
No 290
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.71 E-value=0.00068 Score=73.77 Aligned_cols=179 Identities=9% Similarity=0.021 Sum_probs=103.6
Q ss_pred CcEEEEeeCCC-----------eEEEEECCCCcee--EEEc-ccCCCeeEEEEecCCCEEEEEeC-CCCEEEEEcCCCeE
Q 009597 340 QNILLAGMSDK-----------KIVQWDMNTKEIT--QEYD-QHLGAVNTITFVDSNRRFVTSSD-DKSLRVWEFGIPVV 404 (531)
Q Consensus 340 ~~~l~sg~~dg-----------~I~iwd~~t~~~~--~~~~-~h~~~I~~l~~sp~~~~l~s~s~-Dg~I~iwd~~~~~~ 404 (531)
+.+++.|+.+. .+.+||+.+++.. ..+. .+.....++++..+++.++.|+. +..+.+||..+...
T Consensus 198 g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W 277 (656)
T 1k3i_A 198 GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSW 277 (656)
T ss_dssp TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEE
T ss_pred CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCce
Confidence 46777776542 6889999877532 2332 23334456788889999999984 45899999988755
Q ss_pred EEEeeCCCCCCccEEEEeCCCCEEEEEE-cC-----CeEEEEEcCCcceecee-----eeecCCccccceEEEEEcCCCC
Q 009597 405 IKYISEPHMHSMPSISLHPNTNWLAAQS-LD-----NQILIYSTRERFQLNKK-----KRFAGHIVAGYACQVNFSPDGR 473 (531)
Q Consensus 405 ~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~D-----g~I~iwd~~~~~~~~~~-----~~~~~~~~~~~v~~l~~spdg~ 473 (531)
...-..+....-.+++..+++++++.|+ .+ ..+.+||..+..-. .+ ..+...... ..+..++.
T Consensus 278 ~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~-~~~~~~~~p~~~~~~~-----~~~~~~~~ 351 (656)
T 1k3i_A 278 IPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT-SLPNAKVNPMLTADKQ-----GLYRSDNH 351 (656)
T ss_dssp EECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE-EETTSCSGGGCCCCTT-----GGGTTTCS
T ss_pred eECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce-eCCCcccccccccccc-----ceeecCCc
Confidence 4332222223334566777999999988 34 57999998764311 11 000000000 11234455
Q ss_pred EEEEEeCCC---------cEEEEECCCCeEEEEeeccC---------CcEEEEEEecCCCCEEEEEeCC
Q 009597 474 FVMSGDGEG---------KCWFWDWKSCKVFRTLKCHE---------GVCIGCEWHPLEQSKVATCGWD 524 (531)
Q Consensus 474 ~l~sgs~dg---------~I~iwd~~~~~~~~~~~~h~---------~~V~~v~~~p~~~~~l~t~s~D 524 (531)
.++.|+.+| .+..||..+.........+. ..-.++.+...++.+++.||.+
T Consensus 352 iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~ 420 (656)
T 1k3i_A 352 AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSP 420 (656)
T ss_dssp CCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBS
T ss_pred eEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCC
Confidence 555554443 56788887765443332221 1224455544467778887754
No 291
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.68 E-value=0.0092 Score=59.34 Aligned_cols=204 Identities=15% Similarity=0.263 Sum_probs=118.1
Q ss_pred EEecCccCceEEEEEccCCCEEEEEe------------cCCeEEEEeCCC--CcEEEEcc--C------CCcceEEEEcc
Q 009597 278 RTYMGHSKAVRDISFCNDGTKFLTAS------------YDKNIKYWDTET--GQVIRTFS--T------GKIPYVVKLNP 335 (531)
Q Consensus 278 ~~l~gH~~~V~~l~fspdg~~l~s~s------------~Dg~I~vWd~~t--~~~i~~~~--~------~~~~~~~~~~~ 335 (531)
+.+.+-....-+|...|+|..+++++ .+|.|.++|..+ ++. ..+. . .-.+.-+.+..
T Consensus 43 ~~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~ 121 (355)
T 3sre_A 43 NLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFI 121 (355)
T ss_dssp EECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEE
T ss_pred EEeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEE
Confidence 33455344566777888886666652 689999999873 332 2222 1 12345555555
Q ss_pred CCCCC-cEEEEeeC--CCeEEEEECCCCc----eeEEEccc-CCCeeEEEEecCCCEEEEEeC-----------------
Q 009597 336 DDDKQ-NILLAGMS--DKKIVQWDMNTKE----ITQEYDQH-LGAVNTITFVDSNRRFVTSSD----------------- 390 (531)
Q Consensus 336 ~~~~~-~~l~sg~~--dg~I~iwd~~t~~----~~~~~~~h-~~~I~~l~~sp~~~~l~s~s~----------------- 390 (531)
+.+.. .++++-.. +..|.+|++.... .+..+.+. ....+.+.+.++|+++++...
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~ 201 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLA 201 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCC
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCC
Confidence 42222 35555444 5678887765432 23344332 246789999999987776541
Q ss_pred CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEEEEEcCCcceeceeeeecCCccccceEEEEEc
Q 009597 391 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS-LDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 469 (531)
Q Consensus 391 Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~s 469 (531)
.|.|..+|.. .. ..+.. .......++|+|+++.|.++. ..+.|..|++.....+.....+. ..+..-.+++.
T Consensus 202 ~g~vyr~d~~--~~-~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~---~~g~PDGi~vD 274 (355)
T 3sre_A 202 WSFVTYYSPN--DV-RVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS---FDTLVDNISVD 274 (355)
T ss_dssp CEEEEEECTT--CC-EEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE---CSSEEEEEEEC
T ss_pred ccEEEEEECC--eE-EEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe---CCCCCceEEEe
Confidence 2344444443 22 22221 334567899999998877765 46899999986432333333331 13556678999
Q ss_pred C-CCCEEEEEeCC-CcEEEEEC
Q 009597 470 P-DGRFVMSGDGE-GKCWFWDW 489 (531)
Q Consensus 470 p-dg~~l~sgs~d-g~I~iwd~ 489 (531)
+ +|++.+++..+ +.|..|+.
T Consensus 275 ~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 275 PVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp TTTCCEEEEEESCHHHHHSCCT
T ss_pred CCCCcEEEEecCCceEEEEECC
Confidence 9 59887766533 34444443
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.67 E-value=0.052 Score=53.21 Aligned_cols=230 Identities=10% Similarity=0.050 Sum_probs=123.7
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCC----CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG----KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT 359 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~----~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t 359 (531)
...+.+|.|.+ +. ++.++.++.|.. ..+.|+.-...... .....+.+.. + +.+++++ .+|.|.. ....
T Consensus 79 ~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~--~-~~~~~~~-~~g~v~~-S~Dg 150 (327)
T 2xbg_A 79 DYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALG--N-GSAEMIT-NVGAIYR-TKDS 150 (327)
T ss_dssp CCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEE--T-TEEEEEE-TTCCEEE-ESST
T ss_pred CccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEEC--C-CCEEEEe-CCccEEE-EcCC
Confidence 44688999976 44 444555675544 33334433332211 1122233222 2 2444444 4554432 2222
Q ss_pred CceeEE-EcccCCCeeEEEEecCCCEEEEEeCCCCEEE-EEc--CCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCC
Q 009597 360 KEITQE-YDQHLGAVNTITFVDSNRRFVTSSDDKSLRV-WEF--GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN 435 (531)
Q Consensus 360 ~~~~~~-~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~i-wd~--~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg 435 (531)
++.-.. ...+...+..+.+.+++.+++.+. ++.+.. +|- .+-..+ ..+....+..+.+.+++.++ +++.+|
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~---~~~~~~~~~~~~~~~~g~~~-~~~~~G 225 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPH---NRTTSRRLHNMGFTPDGRLW-MIVNGG 225 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEE---ECCSSSCEEEEEECTTSCEE-EEETTT
T ss_pred CCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeEC---CCCCCCccceeEECCCCCEE-EEeCCc
Confidence 332222 234556788999999888776664 444443 442 222332 23455678889999888755 556788
Q ss_pred eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec---cCCcEEEEEEec
Q 009597 436 QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC---HEGVCIGCEWHP 512 (531)
Q Consensus 436 ~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~---h~~~V~~v~~~p 512 (531)
.+++.+...+........ ........+..+.+.+++.+++++. +|.| ++....++....+.. +...+.++.|.+
T Consensus 226 ~~~~s~~D~G~tW~~~~~-~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~ 302 (327)
T 2xbg_A 226 KIAFSDPDNSENWGELLS-PLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFS 302 (327)
T ss_dssp EEEEEETTEEEEECCCBC-TTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEE
T ss_pred eEEEecCCCCCeeEeccC-CcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEEC
Confidence 877764332322222111 1000112367788998888777665 6666 344454554444432 235677888875
Q ss_pred CCCCEEEEEeCCCCEEeeC
Q 009597 513 LEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 513 ~~~~~l~t~s~Dg~I~iWD 531 (531)
++ .++.++.+|.|.-++
T Consensus 303 -~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 303 -PD-QGFILGQKGILLRYV 319 (327)
T ss_dssp -TT-EEEEECSTTEEEEEC
T ss_pred -CC-ceEEEcCCceEEEEc
Confidence 33 477778899887654
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.63 E-value=0.0052 Score=60.07 Aligned_cols=161 Identities=10% Similarity=0.034 Sum_probs=104.8
Q ss_pred eEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEccc-----C--CCeeEEEE---ecCCCEEEEEe---------
Q 009597 329 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQH-----L--GAVNTITF---VDSNRRFVTSS--------- 389 (531)
Q Consensus 329 ~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h-----~--~~I~~l~~---sp~~~~l~s~s--------- 389 (531)
.+..|.. ..+.++++....+.|..||...+........+ . ..+..|.| .|+++++++..
T Consensus 16 E~~~wd~--~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 16 EDTIYDR--TRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp SCEEEET--TTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred cCccCcC--CCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 3444444 23355556668999999999766443332211 1 13579999 58877777543
Q ss_pred ----CCCCEEEEEcC---CCeEEEEeeCC------------CCCCccEEEEeCCCCEEEEEEcC-CeEEEEEcCCcceec
Q 009597 390 ----DDKSLRVWEFG---IPVVIKYISEP------------HMHSMPSISLHPNTNWLAAQSLD-NQILIYSTRERFQLN 449 (531)
Q Consensus 390 ----~Dg~I~iwd~~---~~~~~~~~~~~------------~~~~v~~v~~sp~~~~l~s~s~D-g~I~iwd~~~~~~~~ 449 (531)
.+..|..||+. +++.+...... .......++..++|+..++++.. +.|..++.... .+.
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~ 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence 16779999998 66555444321 11247789999999999999998 88888887643 221
Q ss_pred eee-eecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 009597 450 KKK-RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSC 492 (531)
Q Consensus 450 ~~~-~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~ 492 (531)
... ...........+.|+++|+|..|++....|.|..+|+...
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 111 1110111122556999999999988877999999998853
No 294
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.56 E-value=0.0094 Score=57.48 Aligned_cols=218 Identities=10% Similarity=0.009 Sum_probs=111.2
Q ss_pred CCCEEEEEe-cC-----CeEEEEeCCCCcEEEEc--cCCCcceEEEEccCCCCCcEEEEeeCC-----CeEEEEECCCCc
Q 009597 295 DGTKFLTAS-YD-----KNIKYWDTETGQVIRTF--STGKIPYVVKLNPDDDKQNILLAGMSD-----KKIVQWDMNTKE 361 (531)
Q Consensus 295 dg~~l~s~s-~D-----g~I~vWd~~t~~~i~~~--~~~~~~~~~~~~~~~~~~~~l~sg~~d-----g~I~iwd~~t~~ 361 (531)
++.+++.|+ .+ ..+.+||+.+.+....- ........... . ++.+++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS-L---HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-E---TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE-E---CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 344555555 22 36888998877644322 11111122222 1 23677777765 468999998766
Q ss_pred ---eeEEEcccCCCeeEEEEecCCCEEEEEeCC-----CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc
Q 009597 362 ---ITQEYDQHLGAVNTITFVDSNRRFVTSSDD-----KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL 433 (531)
Q Consensus 362 ---~~~~~~~h~~~I~~l~~sp~~~~l~s~s~D-----g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~ 433 (531)
-...-......-...+..-+++.++.|+.+ ..+.+||..+......-..+....-.+++.. ++++++.|+.
T Consensus 90 ~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~ 168 (301)
T 2vpj_A 90 DGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-SGVIYCLGGY 168 (301)
T ss_dssp TCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-TTEEEEECCB
T ss_pred CCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE-CCEEEEECCC
Confidence 332211111111111222267777777654 3588999888765443322222222233333 6777777776
Q ss_pred C-----CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeEEEEe--ecc
Q 009597 434 D-----NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE-----GKCWFWDWKSCKVFRTL--KCH 501 (531)
Q Consensus 434 D-----g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d-----g~I~iwd~~~~~~~~~~--~~h 501 (531)
+ ..+.+||..+..= ..+..+.... .....+.+ ++.+++.|+.+ ..+.+||+.+.+-...- ...
T Consensus 169 ~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r--~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHW-TNVTPMATKR--SGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp CSSCBCCCEEEEETTTTEE-EEECCCSSCC--BSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred CCCcccceEEEEeCCCCcE-EeCCCCCccc--ccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence 5 4688999876421 1111111111 11111222 56777777754 46899999876543322 111
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCC
Q 009597 502 EGVCIGCEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 502 ~~~V~~v~~~p~~~~~l~t~s~Dg 525 (531)
......+.+ ++.+++.||.++
T Consensus 244 r~~~~~~~~---~~~i~v~GG~~~ 264 (301)
T 2vpj_A 244 RCYVGATVL---RGRLYAIAGYDG 264 (301)
T ss_dssp CBSCEEEEE---TTEEEEECCBCS
T ss_pred ccceeEEEE---CCEEEEEcCcCC
Confidence 111122222 456777777653
No 295
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.55 E-value=0.0038 Score=64.09 Aligned_cols=153 Identities=12% Similarity=0.190 Sum_probs=95.3
Q ss_pred CCeeEEEEec-CCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcC-C----eEEEEEcCC
Q 009597 371 GAVNTITFVD-SNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD-N----QILIYSTRE 444 (531)
Q Consensus 371 ~~I~~l~~sp-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~D-g----~I~iwd~~~ 444 (531)
.....|+++| ++..|+.+...+.|+.+|+.......... .......+++++++++|+++... + .+.+++...
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 3457899998 45566666555889999998876544432 44567899999999966666542 2 344444332
Q ss_pred cceeceeeeecCCccccceEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEeec-cCCcEEEEEEecCCCC-EEEEE
Q 009597 445 RFQLNKKKRFAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKC-HEGVCIGCEWHPLEQS-KVATC 521 (531)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~sgs~dg~I~iwd~~~~~~~~~~~~-h~~~V~~v~~~p~~~~-~l~t~ 521 (531)
..... ..+.. ......++++| +|.++++-...+.|+.++...+........ .......++|+| ++. ++++-
T Consensus 215 ~~~~~--~~l~~---~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~p-dG~~lyv~d 288 (430)
T 3tc9_A 215 GFKVI--TELTK---GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHP-SGNYAYIVV 288 (430)
T ss_dssp TSCSE--EEEEE---CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECT-TSSEEEEEE
T ss_pred ceeee--eeecc---CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcC-CCCEEEEEE
Confidence 21100 11111 11234488999 677776766788999999987765322222 123467899999 556 55555
Q ss_pred eCCCCEEeeC
Q 009597 522 GWDGLIKYWD 531 (531)
Q Consensus 522 s~Dg~I~iWD 531 (531)
...+.|..+|
T Consensus 289 ~~~~~I~~~~ 298 (430)
T 3tc9_A 289 VNQHYILRSD 298 (430)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCEEEEEe
Confidence 5566777653
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.54 E-value=0.071 Score=57.38 Aligned_cols=219 Identities=11% Similarity=-0.020 Sum_probs=133.1
Q ss_pred EEEEEecCCeEEEEeCCCCcEEEEccCCC--cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeE
Q 009597 298 KFLTASYDKNIKYWDTETGQVIRTFSTGK--IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNT 375 (531)
Q Consensus 298 ~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~--~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~ 375 (531)
+|+-+ ....|+..++++......+.... .+..+.+.+ ..+.++++-..++.|..+++........+.........
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~--~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~G 84 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDV--TDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEG 84 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEEC--CCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcce
Confidence 34443 45689999998766544444333 344455554 44567777788899999998765544444444456788
Q ss_pred EEEecCCCEE-EEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc--CCeEEEEEcCCcceeceee
Q 009597 376 ITFVDSNRRF-VTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL--DNQILIYSTRERFQLNKKK 452 (531)
Q Consensus 376 l~~sp~~~~l-~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~--Dg~I~iwd~~~~~~~~~~~ 452 (531)
|++.+.++.| ++-...+.|.+.++........+ .........++++|...+|..... .+.|...++........
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~-~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l-- 161 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLV-WKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTL-- 161 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEE-CSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE--
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEE-eCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEE--
Confidence 9998765554 55555678999998765332222 224456789999996555555543 46788888765432211
Q ss_pred eecCCccccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEe
Q 009597 453 RFAGHIVAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 529 (531)
Q Consensus 453 ~~~~~~~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~i 529 (531)
.. . -.....|++++++..|+.+. ..+.|...|+..... ..+........++++.. +.+++|-...+.|..
T Consensus 162 -~~-~--~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~ 232 (628)
T 4a0p_A 162 -VP-N--VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIER 232 (628)
T ss_dssp -EC-S--CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTTTEEEE
T ss_pred -EC-C--CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCCCEEEE
Confidence 11 1 23467799999877766665 567899999865433 22332333445777754 334444333555544
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.44 E-value=0.00033 Score=76.73 Aligned_cols=209 Identities=7% Similarity=-0.072 Sum_probs=120.9
Q ss_pred CceEEEEEccCCCEEEEE-ecCCeEEEEeCCC----CcEEEEccC-CCcceEEEEccCCCCCcEEEEeeCCCeEEEEECC
Q 009597 285 KAVRDISFCNDGTKFLTA-SYDKNIKYWDTET----GQVIRTFST-GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN 358 (531)
Q Consensus 285 ~~V~~l~fspdg~~l~s~-s~Dg~I~vWd~~t----~~~i~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~ 358 (531)
..+..|+|.+.+..|+.+ ...+.|+.+++.. ......+.. ...+..+.+.+. .++++++-...+.|.++++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~--~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI--HSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS--SSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee--CCcEEEEeccCCeEEEEecC
Confidence 456789999865555544 4567899998875 222222211 122334444433 33566666677899999987
Q ss_pred CCceeEEEcccCCCeeEEEEecCCCEEEEEe-CC-CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEE-EEEcCC
Q 009597 359 TKEITQEYDQHLGAVNTITFVDSNRRFVTSS-DD-KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA-AQSLDN 435 (531)
Q Consensus 359 t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s-~D-g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~-s~s~Dg 435 (531)
.......+.........|++.|.+.+|+.+. .. +.|.++++...... .+..........|+|+|++..|+ +-+..+
T Consensus 484 g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-~l~~~~l~~PnGlavd~~~~~LY~aD~~~~ 562 (699)
T 1n7d_A 484 GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLVTENIQWPNGITLDLLSGRLYWVDSKLH 562 (699)
T ss_dssp SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-EESCSSCSSCCCEEECTTTCCEEEEETTTT
T ss_pred CCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-EEEeCCCCCccEEEEeccCCEEEEEecCCC
Confidence 6554443433345567899998655544443 22 67888777543222 22222334567899998755554 444567
Q ss_pred eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec
Q 009597 436 QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500 (531)
Q Consensus 436 ~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 500 (531)
.|.++++...... .+...... ......|++..+ .++++....+.|..++..+++.+..+..
T Consensus 563 ~I~~~d~dG~~~~-~~~~~~~~--~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 563 SISSIDVNGGNRK-TILEDEKR--LAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EEEEECSSSSCCE-EECCCSSS--CSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred eEEEEccCCCceE-EEEecCCc--CCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 8999998653221 11111111 111223555443 4444555678999999888888877754
No 298
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.43 E-value=0.018 Score=55.58 Aligned_cols=215 Identities=8% Similarity=0.005 Sum_probs=108.1
Q ss_pred CEEEEEecC----CeEEEEeCCCCcEEEE--ccCCCcceEEEEccCCCCCcEEEEeeCC-----CeEEEEECCCCceeEE
Q 009597 297 TKFLTASYD----KNIKYWDTETGQVIRT--FSTGKIPYVVKLNPDDDKQNILLAGMSD-----KKIVQWDMNTKEITQE 365 (531)
Q Consensus 297 ~~l~s~s~D----g~I~vWd~~t~~~i~~--~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----g~I~iwd~~t~~~~~~ 365 (531)
.+++.|+.+ ..+.++|+.+.+.... +........+... ++.+++.|+.+ ..+.+||+.+.+-...
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM----AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE----TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE----CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 344455432 3578888887764432 1111111222221 23677787755 3688999887653332
Q ss_pred EcccCCCe-eEEEEecCCCEEEEEeCCC-----CEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcC-----
Q 009597 366 YDQHLGAV-NTITFVDSNRRFVTSSDDK-----SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD----- 434 (531)
Q Consensus 366 ~~~h~~~I-~~l~~sp~~~~l~s~s~Dg-----~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~D----- 434 (531)
-....... .+++. -+++.++.|+.++ .+.+||+.+..-...-..+....-.+++.. ++++++.|+.+
T Consensus 93 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 93 ANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQ 170 (302)
T ss_dssp CCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTTTE
T ss_pred CCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-CCEEEEEeCCCCCCCc
Confidence 21111111 12222 2677778887654 477889888765443222222222333333 56777776643
Q ss_pred --CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeEEEE--eeccCCcE
Q 009597 435 --NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE-----GKCWFWDWKSCKVFRT--LKCHEGVC 505 (531)
Q Consensus 435 --g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d-----g~I~iwd~~~~~~~~~--~~~h~~~V 505 (531)
..+.+||..+..= ..+..+.... .....+.+ ++.+++.|+.+ ..+.+||..+.+-... +.......
T Consensus 171 ~~~~~~~yd~~~~~W-~~~~~~p~~r--~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~ 245 (302)
T 2xn4_A 171 CLSTVECYNATTNEW-TYIAEMSTRR--SGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNA 245 (302)
T ss_dssp ECCCEEEEETTTTEE-EEECCCSSCC--BSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred cccEEEEEeCCCCcE-EECCCCcccc--ccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccC
Confidence 4588899876421 1111111111 11111222 57777777754 3689999987654322 11111111
Q ss_pred EEEEEecCCCCEEEEEeCCC
Q 009597 506 IGCEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 506 ~~v~~~p~~~~~l~t~s~Dg 525 (531)
+++.. ++.+++.||.++
T Consensus 246 -~~~~~--~~~i~v~GG~~~ 262 (302)
T 2xn4_A 246 -GVCAV--NGLLYVVGGDDG 262 (302)
T ss_dssp -EEEEE--TTEEEEECCBCS
T ss_pred -eEEEE--CCEEEEECCcCC
Confidence 22222 556777777654
No 299
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.43 E-value=0.039 Score=63.64 Aligned_cols=216 Identities=13% Similarity=0.164 Sum_probs=127.1
Q ss_pred eEEEEeCCCCcEEEEccCCCcc--eEEEE-ccCCCCCcEEEEee----------CCCeEEEEECCCCceeEEE-cccCCC
Q 009597 307 NIKYWDTETGQVIRTFSTGKIP--YVVKL-NPDDDKQNILLAGM----------SDKKIVQWDMNTKEITQEY-DQHLGA 372 (531)
Q Consensus 307 ~I~vWd~~t~~~i~~~~~~~~~--~~~~~-~~~~~~~~~l~sg~----------~dg~I~iwd~~t~~~~~~~-~~h~~~ 372 (531)
.|++.|..+.+.+..+.....- .++.. ........++++|+ ..|.|++|++..++..... ....++
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 4778888888877766544433 33332 23333346888876 4588999998754432222 224578
Q ss_pred eeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceeceee
Q 009597 373 VNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 452 (531)
Q Consensus 373 I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~ 452 (531)
|.+++-. +| +|++|- ..+|++|++...+.+..-.. +-..|..+.....++++++|..-..|.++..+... ..+.
T Consensus 888 v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~-~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~--~~L~ 961 (1158)
T 3ei3_A 888 VYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELRTECN-HYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPME--GNFE 961 (1158)
T ss_dssp EEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEEEEEE-ECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTT--TEEE
T ss_pred CEEEeee-CC-EEEEEc-CCEEEEEECCCCceEEEEee-ccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCC--CeEE
Confidence 8888755 34 555544 46899999987643331111 11224444444467889998887777775543211 2223
Q ss_pred eecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCC--------CeEEEEeeccCC-cEEEEE---EecCC------
Q 009597 453 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS--------CKVFRTLKCHEG-VCIGCE---WHPLE------ 514 (531)
Q Consensus 453 ~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~--------~~~~~~~~~h~~-~V~~v~---~~p~~------ 514 (531)
.+.......+++++.|-.++ .++.++.+|+|.+..... .++...-.-|-+ .|+++. +.+..
T Consensus 962 ~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~ 1040 (1158)
T 3ei3_A 962 EIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETST 1040 (1158)
T ss_dssp EEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------
T ss_pred EEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccc
Confidence 33334445678888876554 677899999999987643 233333333433 455554 22311
Q ss_pred --CCEEEEEeCCCCEEe
Q 009597 515 --QSKVATCGWDGLIKY 529 (531)
Q Consensus 515 --~~~l~t~s~Dg~I~i 529 (531)
...++-++.+|.|-+
T Consensus 1041 ~~~~~il~~T~~GsIg~ 1057 (1158)
T 3ei3_A 1041 PTQGSVLFGTVNGMIGL 1057 (1158)
T ss_dssp CEEEEEEEEETTSCEEE
T ss_pred cccceEEEEecCCEEEE
Confidence 235777888998865
No 300
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.42 E-value=0.028 Score=54.26 Aligned_cols=215 Identities=7% Similarity=-0.006 Sum_probs=111.0
Q ss_pred EEEEEec--CCeEEEEeCCCCcEEEEc--cCCCcceEEEEccCCCCCcEEEEeeCC----CeEEEEECCCCceeEEEccc
Q 009597 298 KFLTASY--DKNIKYWDTETGQVIRTF--STGKIPYVVKLNPDDDKQNILLAGMSD----KKIVQWDMNTKEITQEYDQH 369 (531)
Q Consensus 298 ~l~s~s~--Dg~I~vWd~~t~~~i~~~--~~~~~~~~~~~~~~~~~~~~l~sg~~d----g~I~iwd~~t~~~~~~~~~h 369 (531)
+++.|+. ...+.+||..+.+....- ........+.. . ++.+++.|+.+ ..+.+||+.+.+-...-...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~---~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF-W---DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE-E---TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE-E---CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 4555554 357889998887654322 11122222222 1 23577787755 67889999887543332222
Q ss_pred CCCeeEEEEecCCCEEEEEeCC------CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc---------C
Q 009597 370 LGAVNTITFVDSNRRFVTSSDD------KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL---------D 434 (531)
Q Consensus 370 ~~~I~~l~~sp~~~~l~s~s~D------g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~---------D 434 (531)
.......+..-+++.++.|+.+ ..+.+||..+..-...-..+....-.+++.. ++++++.|+. -
T Consensus 90 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 90 TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEEC
T ss_pred ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CCEEEEECCCCCCCCccccc
Confidence 2221112222367777887765 4689999988765443222222222233332 6677777664 3
Q ss_pred CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeEEEE--eeccCCcEEE
Q 009597 435 NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE-----GKCWFWDWKSCKVFRT--LKCHEGVCIG 507 (531)
Q Consensus 435 g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d-----g~I~iwd~~~~~~~~~--~~~h~~~V~~ 507 (531)
..+.+||..+.. ...+..+.... .....+.+ ++++++.|+.+ ..+.+||..+.+-... +.........
T Consensus 169 ~~~~~yd~~~~~-W~~~~~~p~~r--~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 169 NSCEVYDPATET-WTELCPMIEAR--KNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp CCEEEEETTTTE-EEEECCCSSCC--BSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred ceEEEeCCCCCe-EEECCCccchh--hcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeE
Confidence 458899987652 11111111111 11111222 56777777643 3688999887653322 2211112222
Q ss_pred EEEecCCCCEEEEEeCCC
Q 009597 508 CEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 508 v~~~p~~~~~l~t~s~Dg 525 (531)
+.+ ++.+++.||.++
T Consensus 244 ~~~---~~~i~v~GG~~~ 258 (306)
T 3ii7_A 244 AAV---GSIVYVLAGFQG 258 (306)
T ss_dssp EEE---TTEEEEEECBCS
T ss_pred EEE---CCEEEEEeCcCC
Confidence 222 556777787653
No 301
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.41 E-value=0.059 Score=53.49 Aligned_cols=233 Identities=12% Similarity=0.056 Sum_probs=119.5
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcE--EEEcc----CCCcceEEEEccCCC-CCcEEEEeeCC-----Ce
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQV--IRTFS----TGKIPYVVKLNPDDD-KQNILLAGMSD-----KK 351 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~--i~~~~----~~~~~~~~~~~~~~~-~~~~l~sg~~d-----g~ 351 (531)
-..-.+|+|.|+|+++ .+..+|.|++++ +++. +..+. ....+.-+.++++-. ++.++++-... +.
T Consensus 30 l~~P~~ia~~pdG~l~-V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGML-IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEE-EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEE-EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 4457899999999854 455679999998 4432 22222 123445566666422 23344444332 67
Q ss_pred EEEEECCCCc-----e-eEEEc---ccCCCeeEEEEecCCCEEEEEeCC-------------CCEEEEEcCCC-------
Q 009597 352 IVQWDMNTKE-----I-TQEYD---QHLGAVNTITFVDSNRRFVTSSDD-------------KSLRVWEFGIP------- 402 (531)
Q Consensus 352 I~iwd~~t~~-----~-~~~~~---~h~~~I~~l~~sp~~~~l~s~s~D-------------g~I~iwd~~~~------- 402 (531)
|..|+...+. . +..+. ........|+|.|+|.++++.+.. +.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 8888876432 1 12233 111234689999999877765432 34555554320
Q ss_pred -----eEEEEeeCCCCCCccEEEEeC-CCCEEEEEEcCCeE------EEEEcCCcce---------------eceeeeec
Q 009597 403 -----VVIKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQI------LIYSTRERFQ---------------LNKKKRFA 455 (531)
Q Consensus 403 -----~~~~~~~~~~~~~v~~v~~sp-~~~~l~s~s~Dg~I------~iwd~~~~~~---------------~~~~~~~~ 455 (531)
.....+..+ ......++|+| ++.++++-...+.+ .|.-+..+.. ......+.
T Consensus 187 ~~~~~~~~~i~a~G-~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 187 LGRRGARPEVYSLG-HRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTCTTSCTTEEEEC-CSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred cCCCCCCccEEEEc-CCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 000011111 13356789999 66666554433331 1222222110 01111111
Q ss_pred CCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCe----E--EEEeeccCCcEEEEEEecCCCCEEEEEe-CCC
Q 009597 456 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK----V--FRTLKCHEGVCIGCEWHPLEQSKVATCG-WDG 525 (531)
Q Consensus 456 ~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~----~--~~~~~~h~~~V~~v~~~p~~~~~l~t~s-~Dg 525 (531)
.+ .....++| .+|.++++.-..+.|...++.... . ...+..-...+..+++.| ++.++++.. .+|
T Consensus 266 ~~---~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p-dG~lyv~~~~~~g 337 (352)
T 2ism_A 266 QG---FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGP-DGALYVTTSNRDG 337 (352)
T ss_dssp TC---CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECT-TSCEEEEECSTTT
T ss_pred CC---CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECC-CCcEEEEEeCCCC
Confidence 11 23456777 467666666666778777765322 1 122222235789999999 556555543 344
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.41 E-value=0.035 Score=59.71 Aligned_cols=207 Identities=9% Similarity=-0.033 Sum_probs=122.0
Q ss_pred ccCceEEEEEccCCCEEE-EEecCCeEEEEeCCCCcE-EEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC
Q 009597 283 HSKAVRDISFCNDGTKFL-TASYDKNIKYWDTETGQV-IRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT 359 (531)
Q Consensus 283 H~~~V~~l~fspdg~~l~-s~s~Dg~I~vWd~~t~~~-i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t 359 (531)
.-..+..|+|++.+..|+ +=...+.|..+++..... ...+..+ ..+..+++.+.. ++++++-...+.|.+.++..
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~--~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG--EKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT--TEEEEEETTTTEEEEEETTS
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC--CEEEEEeCCCCEEEEEECCC
Confidence 345678999998655555 444567899998876532 2223222 455667776643 36777777889999999976
Q ss_pred CceeEEEcccCCCeeEEEEecCCCEEEEEeC--CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEE-EcCCe
Q 009597 360 KEITQEYDQHLGAVNTITFVDSNRRFVTSSD--DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQ-SLDNQ 436 (531)
Q Consensus 360 ~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~-s~Dg~ 436 (531)
......+.........|++.|.+.+|..+.. .+.|...++........+ .........+++++.+..|..+ ...+.
T Consensus 116 ~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~~P~Glald~~~~~LY~aD~~~~~ 194 (619)
T 3s94_A 116 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII-NSEIYWPNGLTLDYEEQKLYWADAKLNF 194 (619)
T ss_dssp CSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSSCSSEEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEE-eCCCCCCcEEEEEccCCEEEEEeCCCCe
Confidence 5443334345566789999997665555543 356666676543322222 2234567889999866555554 45578
Q ss_pred EEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q 009597 437 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498 (531)
Q Consensus 437 I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~ 498 (531)
|..+++..............| ...|++..+ .++++-...+.|...|..+++....+
T Consensus 195 I~~~~~dG~~~~~~~~~~~~~-----P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 195 IHKSNLDGTNRQAVVKGSLPH-----PFALTLFED-ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp EEEESSSCCEEC--------------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred EEEecCCCCccEEEEeCCCCC-----ceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEE
Confidence 999988654322111101112 233677655 34444446778999998777654433
No 303
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.40 E-value=0.13 Score=55.23 Aligned_cols=204 Identities=8% Similarity=-0.051 Sum_probs=128.1
Q ss_pred cCceEEEEEccCCCE-EEEEecCCeEEEEeCCCCcEEEEccCC-CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc
Q 009597 284 SKAVRDISFCNDGTK-FLTASYDKNIKYWDTETGQVIRTFSTG-KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE 361 (531)
Q Consensus 284 ~~~V~~l~fspdg~~-l~s~s~Dg~I~vWd~~t~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~ 361 (531)
-..+..|+|++.+.. +++-..++.|..+++........+..+ ..+..+++.+. .++++++-...+.|.+.++....
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~--~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWL--GKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT--TTEEEEEETTTTEEEEEETTSTT
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeC--CCEEEEEECCCCEEEEEecCCCc
Confidence 346889999986444 555566789999998765444444333 34556666654 33677777778899999987554
Q ss_pred eeEEEcccCCCeeEEEEecCCCEEEEEeC--CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEE
Q 009597 362 ITQEYDQHLGAVNTITFVDSNRRFVTSSD--DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS-LDNQIL 438 (531)
Q Consensus 362 ~~~~~~~h~~~I~~l~~sp~~~~l~s~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~ 438 (531)
....+.........|++.|....|..+.. .+.|...++........+ . .......+++++++..|..+. ..+.|.
T Consensus 114 ~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~-~~~~P~GlalD~~~~~LY~aD~~~~~I~ 191 (628)
T 4a0p_A 114 RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-P-NVGRANGLTIDYAKRRLYWTDLDTNLIE 191 (628)
T ss_dssp CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-C-SCSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-C-CCCCcceEEEccccCEEEEEECCCCEEE
Confidence 33333344566789999986555555542 467777777654332222 2 445678999999766665554 557899
Q ss_pred EEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q 009597 439 IYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 498 (531)
Q Consensus 439 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~ 498 (531)
.+++..... ..+ .... .....+++.. +.++++-...+.|...|..+++....+
T Consensus 192 ~~d~dG~~~-~v~---~~~l--~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 192 SSNMLGLNR-EVI---ADDL--PHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EEETTSCSC-EEE---EECC--SCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEcCCCCce-EEe---eccC--CCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEE
Confidence 999876433 111 1111 2244567654 444444446788999997776544443
No 304
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.37 E-value=0.00094 Score=73.15 Aligned_cols=216 Identities=6% Similarity=-0.080 Sum_probs=120.7
Q ss_pred CCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC----CceeEEEcccCCCeeEEEEec
Q 009597 305 DKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT----KEITQEYDQHLGAVNTITFVD 380 (531)
Q Consensus 305 Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t----~~~~~~~~~h~~~I~~l~~sp 380 (531)
.+.|++.++.+......+.....+..+.+.+. .+.++++-...+.|+.+++.. ......+.........|++.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~--~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETT--TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccc--cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 45788888888776665555555555666543 335566656678999999875 222222222223456788875
Q ss_pred C-CCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc-C-CeEEEEEcCCcceeceeeeecCC
Q 009597 381 S-NRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL-D-NQILIYSTRERFQLNKKKRFAGH 457 (531)
Q Consensus 381 ~-~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~-D-g~I~iwd~~~~~~~~~~~~~~~~ 457 (531)
. ++++++-...+.|.++++........+. ........++++|.+.+|+.... . +.|.++++....... + ....
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~-~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~-l--~~~~ 538 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFR-EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS-L--VTEN 538 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECC-CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE-E--SCSS
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEe-CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE-E--EeCC
Confidence 4 4445555567889999987664443332 23455678999996555544332 2 678887775432111 1 1111
Q ss_pred ccccceEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeEEEEee--ccCCcEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 458 IVAGYACQVNFSPDGRFVMSG-DGEGKCWFWDWKSCKVFRTLK--CHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 458 ~~~~~v~~l~~spdg~~l~sg-s~dg~I~iwd~~~~~~~~~~~--~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
-.....|+|+|++..|+.+ ...+.|.++++........+. .......++++.. ..++++....+.|..+
T Consensus 539 --l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~--~~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 539 --IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSA 610 (699)
T ss_dssp --CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET--TEEEEECSTTTCEEEE
T ss_pred --CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC--CEEEEEeCCCCeEEEE
Confidence 1234559999876555544 466789999986432222221 1112234555543 3455555445666654
No 305
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.33 E-value=0.026 Score=57.90 Aligned_cols=221 Identities=8% Similarity=0.067 Sum_probs=119.7
Q ss_pred ceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecC---Ce-EEEEeCCCCcE-EEEccCCCcceEEEEccCCC
Q 009597 264 EHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYD---KN-IKYWDTETGQV-IRTFSTGKIPYVVKLNPDDD 338 (531)
Q Consensus 264 ~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~D---g~-I~vWd~~t~~~-i~~~~~~~~~~~~~~~~~~~ 338 (531)
..|+.++...++.. ++.+......+|+|+++|+++++.... .. +...+...+.. ...+.....+..+.+.+.
T Consensus 162 ~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~-- 238 (433)
T 4hw6_A 162 DAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQ-- 238 (433)
T ss_dssp SCEEEEETTTTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTT--
T ss_pred CCEEEEECCCCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCC--
Confidence 44555655455444 344455678999999999944444311 12 33333221111 011112223333444442
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEE-cc-cCCCeeEEEEecCCCEEE-EEeCCCCEEEEEcCC--CeE--EEEeeC-
Q 009597 339 KQNILLAGMSDKKIVQWDMNTKEITQEY-DQ-HLGAVNTITFVDSNRRFV-TSSDDKSLRVWEFGI--PVV--IKYISE- 410 (531)
Q Consensus 339 ~~~~l~sg~~dg~I~iwd~~t~~~~~~~-~~-h~~~I~~l~~sp~~~~l~-s~s~Dg~I~iwd~~~--~~~--~~~~~~- 410 (531)
.+.++++-..++.|+.+|..++.....+ .. ....-..|+|+|++++|+ +-...+.|+.+++.. +.. ...+..
T Consensus 239 ~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~ 318 (433)
T 4hw6_A 239 NGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQ 318 (433)
T ss_dssp TCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEEC
T ss_pred CCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEec
Confidence 3466667777889999999877763333 21 122234799999998554 445567899988652 211 111111
Q ss_pred -C------------CCCCccEEEE---------eCCCCEEEEEEcCCeEEEEEcCCcceeceeeee-----cCCc-----
Q 009597 411 -P------------HMHSMPSISL---------HPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF-----AGHI----- 458 (531)
Q Consensus 411 -~------------~~~~v~~v~~---------sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~-----~~~~----- 458 (531)
. .......+++ .+++.++++-...+.|+.++. ++. +..+... .+..
T Consensus 319 ~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~-v~t~~G~g~~~~~G~~dG~~~ 396 (433)
T 4hw6_A 319 HSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR-VTTYAGRGNSREWGYVDGELR 396 (433)
T ss_dssp TTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE-EEEEECCCTTCSSCCBCEETT
T ss_pred CCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC-EEEEEeCCCCCccccCCCccc
Confidence 0 1123456888 667777777667788999985 332 1111100 0000
Q ss_pred ---cccceEEEEEc-CCCCEEEEEeCCCcEEEEEC
Q 009597 459 ---VAGYACQVNFS-PDGRFVMSGDGEGKCWFWDW 489 (531)
Q Consensus 459 ---~~~~v~~l~~s-pdg~~l~sgs~dg~I~iwd~ 489 (531)
.-.....|+++ ++|.++++-...+.|+.+++
T Consensus 397 ~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 397 SQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp TTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred cccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 01235678888 56666655556677777764
No 306
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.26 E-value=0.14 Score=50.01 Aligned_cols=229 Identities=11% Similarity=0.102 Sum_probs=120.2
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccC---CCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST---GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK 360 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~---~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~ 360 (531)
...+.+|.|.+++..++ ++..|.| +.....|+.=..... ........+.+.+ +..+++ +..+.|.. ....+
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~-g~~g~i~~-S~DgG 108 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIV-GEPPIMLH-TTDGG 108 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEE-EETTEEEE-ESSTT
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEE-ECCCeEEE-ECCCC
Confidence 45799999987777666 5557765 333444432222211 1122222333332 244444 45564443 33334
Q ss_pred ceeEEEc---ccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeE
Q 009597 361 EITQEYD---QHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQI 437 (531)
Q Consensus 361 ~~~~~~~---~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I 437 (531)
+.-.... .+.+.+..|.+.+++..++++ .++.|.. ....+.....+..+....+..+.+.+++.+++++ ..|.|
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g-~~G~~ 185 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVS-SRGSF 185 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEE-TTSSE
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEE-CCCcE
Confidence 3333322 233567788887777655554 4565432 2222333333334455678899999988877665 45555
Q ss_pred EEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec----cCCcEEEEEEecC
Q 009597 438 LIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC----HEGVCIGCEWHPL 513 (531)
Q Consensus 438 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~----h~~~V~~v~~~p~ 513 (531)
..-.-..+........ .. ...+..+.+.+++.++++ +.+|.+++.+...++....+.. +...+.++.+.+
T Consensus 186 ~~S~d~gG~tW~~~~~--~~--~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~- 259 (327)
T 2xbg_A 186 YSTWEPGQTAWEPHNR--TT--SRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT- 259 (327)
T ss_dssp EEEECTTCSSCEEEEC--CS--SSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-
T ss_pred EEEeCCCCCceeECCC--CC--CCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-
Confidence 4432111211111111 11 234677889999887654 4578887775333444333321 223578888887
Q ss_pred CCCEEEEEeCCCCEE
Q 009597 514 EQSKVATCGWDGLIK 528 (531)
Q Consensus 514 ~~~~l~t~s~Dg~I~ 528 (531)
++.+++. +.+|.|.
T Consensus 260 ~~~~~~~-g~~g~i~ 273 (327)
T 2xbg_A 260 PNEVWLA-GGAGALL 273 (327)
T ss_dssp SSCEEEE-ESTTCEE
T ss_pred CCEEEEE-eCCCeEE
Confidence 5555554 4467663
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.21 E-value=0.068 Score=51.26 Aligned_cols=189 Identities=12% Similarity=0.088 Sum_probs=102.2
Q ss_pred CCCEEEEEecC-----CeEEEEeCCCCc---EEEE--ccCCCcceEEEEccCCCCCcEEEEeeCC-----CeEEEEECCC
Q 009597 295 DGTKFLTASYD-----KNIKYWDTETGQ---VIRT--FSTGKIPYVVKLNPDDDKQNILLAGMSD-----KKIVQWDMNT 359 (531)
Q Consensus 295 dg~~l~s~s~D-----g~I~vWd~~t~~---~i~~--~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----g~I~iwd~~t 359 (531)
++.+++.|+.+ ..+.+||+.+.+ .... +........+... ++.+++.|+.+ ..+.+||+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL----GDMIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE----TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE----CCEEEEEcccCCCcccceEEEEcCCC
Confidence 56777777765 468899988766 3332 2222222222222 23677777654 3688999887
Q ss_pred CceeEEEcccCCCeeEEEEecCCCEEEEEeCC-----CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcC
Q 009597 360 KEITQEYDQHLGAVNTITFVDSNRRFVTSSDD-----KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD 434 (531)
Q Consensus 360 ~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~D-----g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~D 434 (531)
.+-...-..........+..-+++.++.|+.+ ..+.+||+.+..-...-..+....-.+++.. ++.+++.|+.+
T Consensus 138 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~ 216 (301)
T 2vpj_A 138 DQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFD 216 (301)
T ss_dssp TEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBC
T ss_pred CeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CCEEEEEeCCC
Confidence 65433222111111112222267777777754 4588999988765443222222222233332 67777777764
Q ss_pred -----CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCe
Q 009597 435 -----NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE-----GKCWFWDWKSCK 493 (531)
Q Consensus 435 -----g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d-----g~I~iwd~~~~~ 493 (531)
..|.+||+.+..- ..+..+.... .....+.+ ++++++.|+.+ ..|.+||..+.+
T Consensus 217 ~~~~~~~v~~yd~~~~~W-~~~~~~p~~r--~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 217 GTAHLSSVEAYNIRTDSW-TTVTSMTTPR--CYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SSSBCCCEEEEETTTTEE-EEECCCSSCC--BSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCcE-EECCCCCCcc--cceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 4689999876432 1111111111 11121222 67777777755 357889987654
No 308
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.21 E-value=0.14 Score=56.32 Aligned_cols=232 Identities=10% Similarity=0.047 Sum_probs=124.6
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCcee
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT 363 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~ 363 (531)
...|.+|.-..+|. |..|..+| |..||-...+............+.++..+.. ..|..|+.+| +..||..+....
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~--g~lWigT~~G-l~~yd~~~~~f~ 95 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDN--TYLYMGTDNG-ILVYNYRADRYE 95 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETT--TEEEEEETTE-EEEEETTTTEEC
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCC--CcEEEEeCCC-eEEEeCCCCEEE
Confidence 45799999888874 66777776 5566643211111111111223444433332 3566666655 789998876433
Q ss_pred EEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEee---CCCCCCccEEEEeCCCCEEEEEEcCCeEEEE
Q 009597 364 QEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYIS---EPHMHSMPSISLHPNTNWLAAQSLDNQILIY 440 (531)
Q Consensus 364 ~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~---~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iw 440 (531)
.........|.++.. .++ .|..++.+ -|..+|..+........ ......|.++....++.+.+ ++. +-|..|
T Consensus 96 ~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~ 170 (758)
T 3ott_A 96 QPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCRY 170 (758)
T ss_dssp CCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEEE
T ss_pred CcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhhC
Confidence 211112235776654 344 56666666 58889987765443311 11234577887777777554 454 457788
Q ss_pred EcCCcceeceeeee-cCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEE
Q 009597 441 STRERFQLNKKKRF-AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVA 519 (531)
Q Consensus 441 d~~~~~~~~~~~~~-~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~ 519 (531)
+..+.... ..... ........|.++....++..|..|+. +-|..+|..+++...........|.++.... ++. |.
T Consensus 171 ~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~-lW 246 (758)
T 3ott_A 171 IPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDG-NGD-LL 246 (758)
T ss_dssp ETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECT-TCC-EE
T ss_pred ccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcC-CCC-EE
Confidence 87654321 11100 00111234777877777776666664 4588899877654322111233577776665 444 33
Q ss_pred EEeCCCCEEee
Q 009597 520 TCGWDGLIKYW 530 (531)
Q Consensus 520 t~s~Dg~I~iW 530 (531)
.|+.+| |.++
T Consensus 247 igT~~G-l~~~ 256 (758)
T 3ott_A 247 AGTDNG-LYVY 256 (758)
T ss_dssp EEETTE-EEEE
T ss_pred EEeCCc-eeEE
Confidence 344444 4444
No 309
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.18 E-value=0.12 Score=53.57 Aligned_cols=228 Identities=7% Similarity=0.020 Sum_probs=124.7
Q ss_pred eeeeeecccCeeeEEecC---ccCceEEEEE-------ccCCCEEEEEecCC-------eEEEEeCCC-CcEE-----EE
Q 009597 265 HVEDKSTFHGKCMRTYMG---HSKAVRDISF-------CNDGTKFLTASYDK-------NIKYWDTET-GQVI-----RT 321 (531)
Q Consensus 265 ~i~~~~~~~~~~~~~l~g---H~~~V~~l~f-------spdg~~l~s~s~Dg-------~I~vWd~~t-~~~i-----~~ 321 (531)
.++..+...+.....+.. .......|+| +++|.+|+.+...+ .|.+.+... +... ..
T Consensus 163 ~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~ 242 (496)
T 3kya_A 163 AIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQL 242 (496)
T ss_dssp EEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEE
T ss_pred eEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeeccccee
Confidence 455555544444433322 2336899999 99998666665543 266665433 2221 22
Q ss_pred ccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECC-------CCce-----------eEE-Ecc-cCCCeeEEEEecC
Q 009597 322 FSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN-------TKEI-----------TQE-YDQ-HLGAVNTITFVDS 381 (531)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~-------t~~~-----------~~~-~~~-h~~~I~~l~~sp~ 381 (531)
+.....+..+.+++ ..+.++++-..++.|..+|+. ++.. ... +.. .......|+|+|+
T Consensus 243 v~~~~~p~giavdp--~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~ 320 (496)
T 3kya_A 243 IAAYKQCNGATIHP--INGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPT 320 (496)
T ss_dssp EEEESCCCCEEECT--TTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTT
T ss_pred eccCCCceEEEEcC--CCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCC
Confidence 22222334445544 345788888889999999987 5543 122 221 2244578999999
Q ss_pred CCE-EEEEeCCCCEEEEEcC--CCeEE--EEeeC--CC------------CCCcc-EEEEe-------CCCCEEEEEEcC
Q 009597 382 NRR-FVTSSDDKSLRVWEFG--IPVVI--KYISE--PH------------MHSMP-SISLH-------PNTNWLAAQSLD 434 (531)
Q Consensus 382 ~~~-l~s~s~Dg~I~iwd~~--~~~~~--~~~~~--~~------------~~~v~-~v~~s-------p~~~~l~s~s~D 434 (531)
+++ +++-+....|+.++.. ..... ..+.. .. ..... .++.. +++.++++-...
T Consensus 321 G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N 400 (496)
T 3kya_A 321 GKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLN 400 (496)
T ss_dssp SSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGG
T ss_pred CCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCC
Confidence 995 4444566788886653 33210 11211 00 01122 34454 456666666677
Q ss_pred CeEEEEEcCCcceeceeeee-----------cCCcc--------ccceEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeE
Q 009597 435 NQILIYSTRERFQLNKKKRF-----------AGHIV--------AGYACQVNFSPD-GRFVMSGDGEGKCWFWDWKSCKV 494 (531)
Q Consensus 435 g~I~iwd~~~~~~~~~~~~~-----------~~~~~--------~~~v~~l~~spd-g~~l~sgs~dg~I~iwd~~~~~~ 494 (531)
+.|+.++. ++. +..+.-. .+... -.....|+++++ |.++++=.....|+.+++....+
T Consensus 401 ~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 401 FCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp TEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred CEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 88999984 332 2111100 01100 123567888886 66666656677888888765544
Q ss_pred EE
Q 009597 495 FR 496 (531)
Q Consensus 495 ~~ 496 (531)
..
T Consensus 479 ~~ 480 (496)
T 3kya_A 479 VA 480 (496)
T ss_dssp --
T ss_pred cc
Confidence 43
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.16 E-value=0.067 Score=51.49 Aligned_cols=189 Identities=8% Similarity=0.020 Sum_probs=102.3
Q ss_pred CCCEEEEEecC----CeEEEEeCCCCcEEEE--ccCCCcceEEEEccCCCCCcEEEEeeCC------CeEEEEECCCCce
Q 009597 295 DGTKFLTASYD----KNIKYWDTETGQVIRT--FSTGKIPYVVKLNPDDDKQNILLAGMSD------KKIVQWDMNTKEI 362 (531)
Q Consensus 295 dg~~l~s~s~D----g~I~vWd~~t~~~i~~--~~~~~~~~~~~~~~~~~~~~~l~sg~~d------g~I~iwd~~t~~~ 362 (531)
++.+++.|+.+ ..+.+||+.+.+.... +............ ++.+++.|+.+ ..+.+||+.+.+-
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA----EGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE----TTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE----CCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 56677777755 6788999988765433 2222222222222 23577777765 4689999987754
Q ss_pred eEEEcccCCCeeEEEEecCCCEEEEEeC---------CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc
Q 009597 363 TQEYDQHLGAVNTITFVDSNRRFVTSSD---------DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL 433 (531)
Q Consensus 363 ~~~~~~h~~~I~~l~~sp~~~~l~s~s~---------Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~ 433 (531)
...-..........+..-+++.++.|+. -..+.+||..+..-...-..+....-.+++.. ++++++.|+.
T Consensus 131 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~ 209 (306)
T 3ii7_A 131 HTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQ 209 (306)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCE
T ss_pred EeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCC
Confidence 3321111111111112226667777653 34588999988765433222222222333333 6677777765
Q ss_pred C-----CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCe
Q 009597 434 D-----NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE-----GKCWFWDWKSCK 493 (531)
Q Consensus 434 D-----g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d-----g~I~iwd~~~~~ 493 (531)
+ ..+.+||..+.. ...+..+... ......+.+ ++.+++.|+.+ ..+.+||..+.+
T Consensus 210 ~~~~~~~~~~~yd~~~~~-W~~~~~~p~~--r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 210 NGLGGLDNVEYYDIKLNE-WKMVSPMPWK--GVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp ETTEEBCCEEEEETTTTE-EEECCCCSCC--BSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCCCCceEEEeeCCCCc-EEECCCCCCC--ccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 4 468899987642 1111111111 111222223 67788888744 468999988754
No 311
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.13 E-value=0.032 Score=54.02 Aligned_cols=217 Identities=10% Similarity=0.028 Sum_probs=109.6
Q ss_pred CCCEEEEEec----CCeEEEEeCCCCcEEEEc--cCCCcceEEEEccCCCCCcEEEEeeC----C-----CeEEEEECCC
Q 009597 295 DGTKFLTASY----DKNIKYWDTETGQVIRTF--STGKIPYVVKLNPDDDKQNILLAGMS----D-----KKIVQWDMNT 359 (531)
Q Consensus 295 dg~~l~s~s~----Dg~I~vWd~~t~~~i~~~--~~~~~~~~~~~~~~~~~~~~l~sg~~----d-----g~I~iwd~~t 359 (531)
++.+++.|+. -..+.++|..+.+....- ........+... ++.+++.|+. + ..+.+||+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV----GGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE----TTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE----CCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 4555666653 236888898877654321 111111222211 2357777775 2 4688899887
Q ss_pred CceeEEEcccCCCe-eEEEEecCCCEEEEEeCC-----CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc
Q 009597 360 KEITQEYDQHLGAV-NTITFVDSNRRFVTSSDD-----KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL 433 (531)
Q Consensus 360 ~~~~~~~~~h~~~I-~~l~~sp~~~~l~s~s~D-----g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~ 433 (531)
.+-...-....... .+++. -+++.++.|+.+ ..+.+||..+..-...-..+....-.+++.. ++.+++.|+.
T Consensus 100 ~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~ 177 (308)
T 1zgk_A 100 NQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGF 177 (308)
T ss_dssp TEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCB
T ss_pred CeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCC
Confidence 65332211111111 12222 266777777643 3688999988765433222222222233333 6777777776
Q ss_pred C-----CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeEEEE--eecc
Q 009597 434 D-----NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE-----GKCWFWDWKSCKVFRT--LKCH 501 (531)
Q Consensus 434 D-----g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d-----g~I~iwd~~~~~~~~~--~~~h 501 (531)
+ ..+.+||+.+..= ..+..+... ......+.+ ++.+++.|+.+ ..+.+||+.+.+-... +...
T Consensus 178 ~~~~~~~~~~~yd~~~~~W-~~~~~~p~~--r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 252 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEW-RMITAMNTI--RSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR 252 (308)
T ss_dssp CSSCBCCCEEEEETTTTEE-EECCCCSSC--CBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC
T ss_pred CCCCcCceEEEEeCCCCeE-eeCCCCCCc--cccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC
Confidence 5 4688999876421 111111111 111122222 67777777654 4699999987654332 1111
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCC
Q 009597 502 EGVCIGCEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 502 ~~~V~~v~~~p~~~~~l~t~s~Dg 525 (531)
.... +++.. ++.+++.||.++
T Consensus 253 r~~~-~~~~~--~~~i~v~GG~~~ 273 (308)
T 1zgk_A 253 RSAL-GITVH--QGRIYVLGGYDG 273 (308)
T ss_dssp CBSC-EEEEE--TTEEEEECCBCS
T ss_pred ccce-EEEEE--CCEEEEEcCcCC
Confidence 1111 22222 556777777654
No 312
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.10 E-value=0.086 Score=56.61 Aligned_cols=181 Identities=9% Similarity=0.046 Sum_probs=106.4
Q ss_pred CCeEEEEeCCCCc--EEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCce-eEEEcccCCCeeEEEEecC
Q 009597 305 DKNIKYWDTETGQ--VIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI-TQEYDQHLGAVNTITFVDS 381 (531)
Q Consensus 305 Dg~I~vWd~~t~~--~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~-~~~~~~h~~~I~~l~~sp~ 381 (531)
...|+..++.... ..........+..+.+.+. .+.++++-...+.|..+++..... ...+.........|++.+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~--~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFS--HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETT--TTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeC--CCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec
Confidence 4578888887543 2223333444555556553 345666666778899999876532 2333434467889999986
Q ss_pred CCE-EEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc--CCeEEEEEcCCcceeceeeeecCCc
Q 009597 382 NRR-FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL--DNQILIYSTRERFQLNKKKRFAGHI 458 (531)
Q Consensus 382 ~~~-l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~ 458 (531)
++. +++-...+.|.+.++....... +..........|+++|.+.+|+.... .+.|...++........ ....
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~-l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l---~~~~- 169 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKV-LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII---INSE- 169 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEE-EECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE---ECSS-
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEE-EEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEE---EeCC-
Confidence 555 4555567889999987654322 32234556789999997666655553 35777777654322111 1111
Q ss_pred cccceEEEEEcCCCCEEEEEe-CCCcEEEEECCCCe
Q 009597 459 VAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKSCK 493 (531)
Q Consensus 459 ~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~~~ 493 (531)
-.....|++++++..|+.+. ..+.|...|+....
T Consensus 170 -~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~ 204 (619)
T 3s94_A 170 -IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 204 (619)
T ss_dssp -CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE
T ss_pred -CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc
Confidence 23467799999766666554 56789999886543
No 313
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.09 E-value=0.013 Score=57.77 Aligned_cols=197 Identities=11% Similarity=0.078 Sum_probs=110.1
Q ss_pred CEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEc-cC-CCCCcEEEEe-eCCCeEEEEECCCCceeEEEccc----
Q 009597 297 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN-PD-DDKQNILLAG-MSDKKIVQWDMNTKEITQEYDQH---- 369 (531)
Q Consensus 297 ~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~-~~-~~~~~~l~sg-~~dg~I~iwd~~t~~~~~~~~~h---- 369 (531)
.+++.++.||.|.-+|..+|+.+.++........+... +. ...+..++.. +.||.|..++..+|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46889999999999999999999998765111111111 11 1122344444 68999999999888655444321
Q ss_pred CCCeeE---EEE-----ecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCC------ccEEEEe-----CCCCEEEE
Q 009597 370 LGAVNT---ITF-----VDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS------MPSISLH-----PNTNWLAA 430 (531)
Q Consensus 370 ~~~I~~---l~~-----sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~------v~~v~~s-----p~~~~l~s 430 (531)
..++.. ... +..+..+++++.+|.+...|+.+++.+..+....... ..|.... -.+..|+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 112221 000 0145678999999999999999999988875432111 1111111 12456777
Q ss_pred EEcCCeEEEEEcCCcceeceee--eecCCccccce-EEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 009597 431 QSLDNQILIYSTRERFQLNKKK--RFAGHIVAGYA-CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFR 496 (531)
Q Consensus 431 ~s~Dg~I~iwd~~~~~~~~~~~--~~~~~~~~~~v-~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~ 496 (531)
+..+..+.+.+ +++. +.... .+........+ .+...+.|+.++ .++.||.|+-+|..+|+.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~-~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCI-APFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCE-EEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEE-EECCCCEEEEEECCCCcEEE
Confidence 77777777766 3442 21111 11111000000 000112346663 46788888888888777665
No 314
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.07 E-value=0.33 Score=55.89 Aligned_cols=185 Identities=11% Similarity=0.120 Sum_probs=101.8
Q ss_pred cCceEEEEEccC------CCEEEEEec-CCeEEEEeCCCCcEEEEccCC--CcceEEEEccCCCCCcEEEEeeCCCeEEE
Q 009597 284 SKAVRDISFCND------GTKFLTASY-DKNIKYWDTETGQVIRTFSTG--KIPYVVKLNPDDDKQNILLAGMSDKKIVQ 354 (531)
Q Consensus 284 ~~~V~~l~fspd------g~~l~s~s~-Dg~I~vWd~~t~~~i~~~~~~--~~~~~~~~~~~~~~~~~l~sg~~dg~I~i 354 (531)
...|.|+++.|. +.+++.|.. |++|+|+++.+.+.+...... ..+..+.+.... ...+|.+|..||.+.-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~-~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFE-SSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEET-TEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeC-CCcEEEEEeCCCeEEE
Confidence 457999999863 368889986 999999999988777654432 234444443322 3367899999999876
Q ss_pred EEC--CCCceeEE--EcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccE-EEEeCC--CCE
Q 009597 355 WDM--NTKEITQE--YDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPS-ISLHPN--TNW 427 (531)
Q Consensus 355 wd~--~t~~~~~~--~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~-v~~sp~--~~~ 427 (531)
+.+ .+++.... ......++.-..+...+..-+.+..+....++-.+..-....+ ....+.. ..|+.. ..-
T Consensus 632 ~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l---~~~~v~~~~~F~se~~~~g 708 (1158)
T 3ei3_A 632 FGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNV---NLKEVNYMCPLNSDGYPDS 708 (1158)
T ss_dssp EEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEB---SSSCCCEEEEECCSSSTTE
T ss_pred EEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEecc---ChHHhceEeccCcccCCCc
Confidence 654 45544322 2222345655555555554444444565555554433222211 2223333 334332 233
Q ss_pred EEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEE
Q 009597 428 LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS 477 (531)
Q Consensus 428 l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s 477 (531)
++. ..++.++|..+.....+. .+.+.- ...+..++++|..+.++.
T Consensus 709 ~v~-~~~~~LrI~~i~~~~~~~-~~~ipL---~~Tprri~y~~~~~~~~v 753 (1158)
T 3ei3_A 709 LAL-ANNSTLTIGTIDEIQKLH-IRTVPL---YESPRKICYQEVSQCFGV 753 (1158)
T ss_dssp EEE-ECSSCEEEEEECCSSSEE-EEEEEC---SSEEEEEEEEGGGTEEEE
T ss_pred EEE-EcCCceEEEEecccCCee-EEEEeC---CCCceEEEEcCCCCEEEE
Confidence 443 445668888875432221 111111 233566777776665443
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.02 E-value=0.1 Score=50.11 Aligned_cols=189 Identities=10% Similarity=0.094 Sum_probs=101.0
Q ss_pred CCCEEEEEecC-----CeEEEEeCCCCcEEEEcc--CCCcceEEEEccCCCCCcEEEEeeCCC-----eEEEEECCCCce
Q 009597 295 DGTKFLTASYD-----KNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMSDK-----KIVQWDMNTKEI 362 (531)
Q Consensus 295 dg~~l~s~s~D-----g~I~vWd~~t~~~i~~~~--~~~~~~~~~~~~~~~~~~~l~sg~~dg-----~I~iwd~~t~~~ 362 (531)
++.+++.|+.+ ..+.+||..+.+....-. .......+... ++.+++.|+.++ .+.+||+.+.+-
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL----NGLLYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE----TTEEEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE----CCEEEEEcCCCCCccCceEEEEeCCCCeE
Confidence 56677777754 358889988776543322 22222222221 236777777553 578899887654
Q ss_pred eEEEcccCCCe-eEEEEecCCCEEEEEeCC-------CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcC
Q 009597 363 TQEYDQHLGAV-NTITFVDSNRRFVTSSDD-------KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD 434 (531)
Q Consensus 363 ~~~~~~h~~~I-~~l~~sp~~~~l~s~s~D-------g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~D 434 (531)
...-....... .+++. -+++.++.|+.+ ..+.+||+.+..-...-..+....-.+++.. ++++++.|+.+
T Consensus 137 ~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~ 214 (302)
T 2xn4_A 137 FHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHD 214 (302)
T ss_dssp EEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBS
T ss_pred eecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCC
Confidence 33211111111 12222 256677776643 3588999988765443222222222233333 67777887765
Q ss_pred -----CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCeE
Q 009597 435 -----NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG-----KCWFWDWKSCKV 494 (531)
Q Consensus 435 -----g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg-----~I~iwd~~~~~~ 494 (531)
+.+.+||..+..= ..+..+.... .....+. .++++++.|+.++ .+.+||..+.+-
T Consensus 215 ~~~~~~~~~~yd~~~~~W-~~~~~~~~~r--~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAW-RQVADMNMCR--RNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp SSSBCCCEEEEETTTTEE-EEECCCSSCC--BSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCcccceEEEEeCCCCCE-eeCCCCCCcc--ccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 4688999876421 1111111111 1111122 2677777877553 489999887653
No 316
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.00 E-value=0.058 Score=52.29 Aligned_cols=213 Identities=10% Similarity=0.011 Sum_probs=105.7
Q ss_pred EEEEEecCCeEEEEeCCCCcEEE-EccCCCcceEEEEccCCCCCcEEEEeeC-----C------CeEEEEECCCCceeEE
Q 009597 298 KFLTASYDKNIKYWDTETGQVIR-TFSTGKIPYVVKLNPDDDKQNILLAGMS-----D------KKIVQWDMNTKEITQE 365 (531)
Q Consensus 298 ~l~s~s~Dg~I~vWd~~t~~~i~-~~~~~~~~~~~~~~~~~~~~~~l~sg~~-----d------g~I~iwd~~t~~~~~~ 365 (531)
+++.|+ ..+.+||..+++-.. .+.............. ++.+++.|+. . ..+.+||+.+.+-...
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTK--ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECT--TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEE--CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 344555 579999999887543 1211111122222222 3357777773 1 1377889887653221
Q ss_pred EcccCCCe-eEEEEecCCCEEEEEeCC--------CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc-C-
Q 009597 366 YDQHLGAV-NTITFVDSNRRFVTSSDD--------KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL-D- 434 (531)
Q Consensus 366 ~~~h~~~I-~~l~~sp~~~~l~s~s~D--------g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~-D- 434 (531)
-....... .+++.. +++.++.|+.+ ..+.+||..+..-...-..+....-.+++. -++++++.|+. +
T Consensus 83 ~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 83 PPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSD 160 (315)
T ss_dssp CCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTT
T ss_pred CCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCC
Confidence 11111111 122222 56677777632 458899998875433222222222223333 36677777776 2
Q ss_pred ----CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCeEEEEee--ccCC
Q 009597 435 ----NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG-----KCWFWDWKSCKVFRTLK--CHEG 503 (531)
Q Consensus 435 ----g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg-----~I~iwd~~~~~~~~~~~--~h~~ 503 (531)
..+.+||..+..= ..+..+... ......+.+ ++++++.|+.++ .+.+||..+.+-...-. ....
T Consensus 161 ~~~~~~~~~yd~~~~~W-~~~~~~p~~--r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 235 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEW-KELAPMQTA--RSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERS 235 (315)
T ss_dssp SCBCCCEEEEETTTTEE-EECCCCSSC--CBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCB
T ss_pred CcccceEEEEeCCCCeE-EECCCCCCc--hhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccc
Confidence 4688999876421 111111111 111111222 667777777554 58889988765433221 1111
Q ss_pred cEEEEEEecCCCCEEEEEeCC
Q 009597 504 VCIGCEWHPLEQSKVATCGWD 524 (531)
Q Consensus 504 ~V~~v~~~p~~~~~l~t~s~D 524 (531)
.. +++.. ++.+++.||.+
T Consensus 236 ~~-~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 236 SL-SLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp SC-EEEEE--TTEEEEEEEEE
T ss_pred ce-eEEEE--CCEEEEECCcc
Confidence 11 22222 45677777764
No 317
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.73 E-value=0.32 Score=46.90 Aligned_cols=221 Identities=9% Similarity=0.080 Sum_probs=110.8
Q ss_pred eeeeeecccCeeeE-EecCccCceEEEEEccCCCEEEEEec----C-------CeEEEEeCCCCcEEEEccCC--CcceE
Q 009597 265 HVEDKSTFHGKCMR-TYMGHSKAVRDISFCNDGTKFLTASY----D-------KNIKYWDTETGQVIRTFSTG--KIPYV 330 (531)
Q Consensus 265 ~i~~~~~~~~~~~~-~l~gH~~~V~~l~fspdg~~l~s~s~----D-------g~I~vWd~~t~~~i~~~~~~--~~~~~ 330 (531)
.+..++..+.+-.. .+..........+...++..++.|+. + ..+.+||..+.+....-... .....
T Consensus 14 ~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 93 (315)
T 4asc_A 14 GAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFG 93 (315)
T ss_dssp EEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCE
T ss_pred ceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhcee
Confidence 45555555544322 22222222333333457778888874 1 12778898887653321111 11111
Q ss_pred EEEccCCCCCcEEEEeeCC--------CeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeC-C-----CCEEE
Q 009597 331 VKLNPDDDKQNILLAGMSD--------KKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD-D-----KSLRV 396 (531)
Q Consensus 331 ~~~~~~~~~~~~l~sg~~d--------g~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~-D-----g~I~i 396 (531)
+... ++.+++.|+.+ ..+.+||+.+.+-...-..........+..-+++.++.|+. + ..+.+
T Consensus 94 ~~~~----~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 169 (315)
T 4asc_A 94 LGEA----LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCV 169 (315)
T ss_dssp EEEE----TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEE
T ss_pred EEEE----CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEE
Confidence 2211 23677777742 46889999876532211111111112222236677777776 2 46899
Q ss_pred EEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCC-----eEEEEEcCCcceeceeeeecCCccccceEEEEEcCC
Q 009597 397 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN-----QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 471 (531)
Q Consensus 397 wd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg-----~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd 471 (531)
||..+..-...-..+....-.+++.. ++++++.|+.++ .+.+||..+.. ...+..+.... .....+.+ +
T Consensus 170 yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r--~~~~~~~~--~ 243 (315)
T 4asc_A 170 YDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNK-WAPFEAFPQER--SSLSLVSL--V 243 (315)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTE-EEEECCCSSCC--BSCEEEEE--T
T ss_pred EeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCe-EEECCCCCCcc--cceeEEEE--C
Confidence 99988754432222222222233333 677888887664 58889987642 11111111111 11111222 5
Q ss_pred CCEEEEEeCC--------------CcEEEEECCCCeEE
Q 009597 472 GRFVMSGDGE--------------GKCWFWDWKSCKVF 495 (531)
Q Consensus 472 g~~l~sgs~d--------------g~I~iwd~~~~~~~ 495 (531)
+++++.|+.+ ..|.+||..+.+-.
T Consensus 244 ~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 281 (315)
T 4asc_A 244 GTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE 281 (315)
T ss_dssp TEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred CEEEEECCccccCcCCccccccccCcEEEecCCCChhh
Confidence 6777777653 24778888776543
No 318
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.65 E-value=0.14 Score=49.37 Aligned_cols=189 Identities=12% Similarity=0.047 Sum_probs=99.5
Q ss_pred CCCEEEEEec----C-----CeEEEEeCCCCcEEEEc--cCCCcceEEEEccCCCCCcEEEEeeCC-----CeEEEEECC
Q 009597 295 DGTKFLTASY----D-----KNIKYWDTETGQVIRTF--STGKIPYVVKLNPDDDKQNILLAGMSD-----KKIVQWDMN 358 (531)
Q Consensus 295 dg~~l~s~s~----D-----g~I~vWd~~t~~~i~~~--~~~~~~~~~~~~~~~~~~~~l~sg~~d-----g~I~iwd~~ 358 (531)
++.+++.|+. + ..+.+||+.+.+....- ........+... ++.+++.|+.+ ..+.+||+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI----DGHIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE----TTEEEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE----CCEEEEEcCCCCCcccccEEEECCC
Confidence 5667777765 2 46888998877644322 112222222222 23577777643 468889988
Q ss_pred CCceeEEEcccCCCe-eEEEEecCCCEEEEEeCC-----CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE
Q 009597 359 TKEITQEYDQHLGAV-NTITFVDSNRRFVTSSDD-----KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 432 (531)
Q Consensus 359 t~~~~~~~~~h~~~I-~~l~~sp~~~~l~s~s~D-----g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s 432 (531)
+.+-...-....... .+++.. +++.++.|+.+ ..+.+||+.+..-...-..+....-.+++.. ++++++.|+
T Consensus 146 ~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 223 (308)
T 1zgk_A 146 RDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGG 223 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred CCeEeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeC
Confidence 765332211111111 122222 67777777754 4588999988755433222222222233333 677777777
Q ss_pred cC-----CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeE
Q 009597 433 LD-----NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE-----GKCWFWDWKSCKV 494 (531)
Q Consensus 433 ~D-----g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d-----g~I~iwd~~~~~~ 494 (531)
.+ ..+.+||+.+..= ..+..+.... .....+. -++++++.|+.+ ..+.+||..+.+-
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r--~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETW-TFVAPMKHRR--SALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEE-EECCCCSSCC--BSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCCCCccceEEEEeCCCCcE-EECCCCCCCc--cceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 65 5689999876421 1111111111 1111122 257777777744 3578888877543
No 319
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.54 E-value=0.081 Score=53.30 Aligned_cols=137 Identities=15% Similarity=0.139 Sum_probs=88.4
Q ss_pred CeEEEEECCCCceeEEEccc----CCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCe------------EEEEeeCC--
Q 009597 350 KKIVQWDMNTKEITQEYDQH----LGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPV------------VIKYISEP-- 411 (531)
Q Consensus 350 g~I~iwd~~t~~~~~~~~~h----~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~------------~~~~~~~~-- 411 (531)
+.||.-++.....-+.+... -..|..+..+|+|++|+..+. ..|.|-.+-.+. ..+.+...
T Consensus 41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 56666666544334444332 236788999999999988864 468888875221 12222221
Q ss_pred ---CCCCccEEEEeC---CCCEEEEEEcCCeEEEEEcCCcceece-ee----eecCCccccceEEEEEcCCCCEEEEEe-
Q 009597 412 ---HMHSMPSISLHP---NTNWLAAQSLDNQILIYSTRERFQLNK-KK----RFAGHIVAGYACQVNFSPDGRFVMSGD- 479 (531)
Q Consensus 412 ---~~~~v~~v~~sp---~~~~l~s~s~Dg~I~iwd~~~~~~~~~-~~----~~~~~~~~~~v~~l~~spdg~~l~sgs- 479 (531)
...+|..+.||| .+..|++-..|+.|++||+........ +. .+........+.+++|..++-.|...+
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~ 199 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNT 199 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEEC
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEec
Confidence 246799999999 467899999999999999986332111 11 111111114588899999887777755
Q ss_pred -CCCcEEEE
Q 009597 480 -GEGKCWFW 487 (531)
Q Consensus 480 -~dg~I~iw 487 (531)
..|.|+-.
T Consensus 200 t~~GDIYAl 208 (452)
T 3pbp_A 200 TEGGDIFAF 208 (452)
T ss_dssp TTSCEEEEE
T ss_pred CCCCCEEEE
Confidence 77888754
No 320
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.51 E-value=0.067 Score=61.65 Aligned_cols=215 Identities=9% Similarity=0.079 Sum_probs=131.3
Q ss_pred EEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC-CceeEEEcc
Q 009597 290 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT-KEITQEYDQ 368 (531)
Q Consensus 290 l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t-~~~~~~~~~ 368 (531)
.-.+|..+.|+.=. ..++.|+|+++.+.++.+..... ++-|.|.++. .|+..+ +..|+.|++.. ..+++.+..
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~--VvfWkWis~~--~l~lVT-~~aVyHW~~~~~s~P~k~fdR 144 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD--VTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDR 144 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCC--ceEEEecCCC--eeEEEc-CCeEEEeccCCCCccHHHHhc
Confidence 34677776555444 67999999999988888776554 5566665553 233332 56899999964 345555655
Q ss_pred c----CCCeeEEEEecCCCEEEEEe-------CCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEe--CC-CCEEEEEEc-
Q 009597 369 H----LGAVNTITFVDSNRRFVTSS-------DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLH--PN-TNWLAAQSL- 433 (531)
Q Consensus 369 h----~~~I~~l~~sp~~~~l~s~s-------~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~s--p~-~~~l~s~s~- 433 (531)
| ...|..-..+++.++++..| -.|.+.+|..+.... ....+|......+.+. +. ..+++.+..
T Consensus 145 ~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s--Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~ 222 (1630)
T 1xi4_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--QPIEGHAASFAQFKMEGNAEESTLFCFAVRG 222 (1630)
T ss_pred chhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc--hhhhHhHhhhheeccCCCCCCceEEEEEEec
Confidence 5 34666777788888877544 357888888765432 2223344333333322 11 223332222
Q ss_pred --CCeEEEEEcCCc---ceec---eee-eecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCc
Q 009597 434 --DNQILIYSTRER---FQLN---KKK-RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 504 (531)
Q Consensus 434 --Dg~I~iwd~~~~---~~~~---~~~-~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~ 504 (531)
.+.+.|.++... .... ... .+...........+..|+.-..+..-+.-|.|+++|+.++.++..-+-...+
T Consensus 223 ~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~ 302 (1630)
T 1xi4_A 223 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 302 (1630)
T ss_pred CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCc
Confidence 268888887542 1100 000 1222122344556888888888999999999999999999987766555555
Q ss_pred EEEEEEec
Q 009597 505 CIGCEWHP 512 (531)
Q Consensus 505 V~~v~~~p 512 (531)
|...+-+.
T Consensus 303 iF~~~~~~ 310 (1630)
T 1xi4_A 303 IFVTAPHE 310 (1630)
T ss_pred eEEeccCC
Confidence 55554443
No 321
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.50 E-value=0.13 Score=49.82 Aligned_cols=206 Identities=12% Similarity=0.043 Sum_probs=99.2
Q ss_pred eEEEEeCCCCcEEEE-ccCCCcceEEEEccCCCCCcEEEEeeC----CC-------eEEEEECCCCceeEEEcccCC-Ce
Q 009597 307 NIKYWDTETGQVIRT-FSTGKIPYVVKLNPDDDKQNILLAGMS----DK-------KIVQWDMNTKEITQEYDQHLG-AV 373 (531)
Q Consensus 307 ~I~vWd~~t~~~i~~-~~~~~~~~~~~~~~~~~~~~~l~sg~~----dg-------~I~iwd~~t~~~~~~~~~h~~-~I 373 (531)
.+.+||..+.+.... +.............. ++.+++.|+. ++ .+.+||+.+.+-...-..... .-
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQ--QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL 102 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECS--SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEE--CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc
Confidence 478899988775442 111111111222222 2367777773 12 277889877654322111111 11
Q ss_pred eEEEEecCCCEEEEEeCC-------CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEc------CCeEEEE
Q 009597 374 NTITFVDSNRRFVTSSDD-------KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL------DNQILIY 440 (531)
Q Consensus 374 ~~l~~sp~~~~l~s~s~D-------g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~------Dg~I~iw 440 (531)
.+++.. +++.++.|+.+ ..+.+||..+..-...-..+....-.+++. .++++++.|+. -+.+.+|
T Consensus 103 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 103 FGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp CEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEE
T ss_pred cceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEE
Confidence 122222 67777777754 247888988876543322222212223333 36677777764 2458899
Q ss_pred EcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeEEE--EeeccCCcEEEEEEecC
Q 009597 441 STRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE-----GKCWFWDWKSCKVFR--TLKCHEGVCIGCEWHPL 513 (531)
Q Consensus 441 d~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d-----g~I~iwd~~~~~~~~--~~~~h~~~V~~v~~~p~ 513 (531)
|..+..= ......... ......+. -++++++.|+.+ ..+.+||..+.+-.. .+....... +++..
T Consensus 181 d~~~~~W-~~~~~~p~~--r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-- 252 (318)
T 2woz_A 181 NPKKGDW-KDLAPMKTP--RSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI-SLVSL-- 252 (318)
T ss_dssp ETTTTEE-EEECCCSSC--CBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC-EEEEE--
T ss_pred cCCCCEE-EECCCCCCC--cccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce-EEEEE--
Confidence 9876421 111111111 11111122 256777777643 357789987754322 222111111 22222
Q ss_pred CCCEEEEEeCC
Q 009597 514 EQSKVATCGWD 524 (531)
Q Consensus 514 ~~~~l~t~s~D 524 (531)
++.+++.||.+
T Consensus 253 ~~~i~v~GG~~ 263 (318)
T 2woz_A 253 AGSLYAIGGFA 263 (318)
T ss_dssp TTEEEEECCBC
T ss_pred CCEEEEECCee
Confidence 45677777754
No 322
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.47 E-value=0.78 Score=45.28 Aligned_cols=233 Identities=10% Similarity=0.037 Sum_probs=123.1
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCc-EEEEcc----CCCcceEEEEccCCC-CCcEEEEeeC---C----C
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ-VIRTFS----TGKIPYVVKLNPDDD-KQNILLAGMS---D----K 350 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~-~i~~~~----~~~~~~~~~~~~~~~-~~~~l~sg~~---d----g 350 (531)
-....+|+|.|+|+ |+.+..+|.|++++ .+++ .+..+. ....+.-+.+.++-. ++.++++-.. + .
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 45678999999997 55556679999997 4554 333222 112345566665422 2334444332 3 5
Q ss_pred eEEEEECCCC--c-----ee-EEEcc-cCCCeeEEEEecCCCEEEEEeCC-------------CCEEEEEcCCCe-----
Q 009597 351 KIVQWDMNTK--E-----IT-QEYDQ-HLGAVNTITFVDSNRRFVTSSDD-------------KSLRVWEFGIPV----- 403 (531)
Q Consensus 351 ~I~iwd~~t~--~-----~~-~~~~~-h~~~I~~l~~sp~~~~l~s~s~D-------------g~I~iwd~~~~~----- 403 (531)
.|..|+.... . .+ ..+.. .......|+|.|+|.++++.+.. |.|.-++.....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 7778877644 1 11 11221 11134679999999877775432 344444443210
Q ss_pred --EEEEeeCCCCCCccEEEEeC-CCCEEEEEEcCC---eEEEEEcCCcc-------------eeceeeeecCCccccceE
Q 009597 404 --VIKYISEPHMHSMPSISLHP-NTNWLAAQSLDN---QILIYSTRERF-------------QLNKKKRFAGHIVAGYAC 464 (531)
Q Consensus 404 --~~~~~~~~~~~~v~~v~~sp-~~~~l~s~s~Dg---~I~iwd~~~~~-------------~~~~~~~~~~~~~~~~v~ 464 (531)
....+.. .......++|+| ++.++++-...+ .|.+....... .......+. .......
T Consensus 186 f~~~~i~a~-G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~--~~~~ap~ 262 (354)
T 3a9g_A 186 FPNSPIWSY-GHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTG--SETWAPS 262 (354)
T ss_dssp STTCCEEEE-CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT--TCCCCEE
T ss_pred CCCCcEEEE-ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecC--CCCcCCc
Confidence 0011111 123467899999 666555533222 24333211100 000111110 0123466
Q ss_pred EEEEc-------CCCCEEEEEeCCCcEEEEECCCC-eEE--EEee-ccCCcEEEEEEecCCCCEEEEEe
Q 009597 465 QVNFS-------PDGRFVMSGDGEGKCWFWDWKSC-KVF--RTLK-CHEGVCIGCEWHPLEQSKVATCG 522 (531)
Q Consensus 465 ~l~~s-------pdg~~l~sgs~dg~I~iwd~~~~-~~~--~~~~-~h~~~V~~v~~~p~~~~~l~t~s 522 (531)
.++|. .+|.++++.-..+.|...++... +.. ..+. .-...+..+++.| ++.++++..
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~p-DG~lyv~~~ 330 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDD-DGGILISTS 330 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECT-TSCEEEEEC
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECC-CCcEEEEEe
Confidence 78883 56777777767788888888743 332 2232 2245789999999 566666553
No 323
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.44 E-value=0.13 Score=50.67 Aligned_cols=220 Identities=11% Similarity=0.096 Sum_probs=107.1
Q ss_pred CCCEEEEEecC-CeEEEEeCCC--CcEEE--Ecc-CCCcceEEEEccCCCCCcEEEEeeC-C---------CeEEEEECC
Q 009597 295 DGTKFLTASYD-KNIKYWDTET--GQVIR--TFS-TGKIPYVVKLNPDDDKQNILLAGMS-D---------KKIVQWDMN 358 (531)
Q Consensus 295 dg~~l~s~s~D-g~I~vWd~~t--~~~i~--~~~-~~~~~~~~~~~~~~~~~~~l~sg~~-d---------g~I~iwd~~ 358 (531)
++.+++.|+.+ ..+.++|+.+ .+... .+. .......+... ++.+++.|+. + ..+.+||+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI----DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE----TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE----CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 56666666543 4688888864 33322 222 11222222222 2357777775 2 468899998
Q ss_pred CCceeEEEccc-CCCeeEEEEecCCCEEEEEeCC---------------------------------------CCEEEEE
Q 009597 359 TKEITQEYDQH-LGAVNTITFVDSNRRFVTSSDD---------------------------------------KSLRVWE 398 (531)
Q Consensus 359 t~~~~~~~~~h-~~~I~~l~~sp~~~~l~s~s~D---------------------------------------g~I~iwd 398 (531)
+.+-...-... .......+...+++.++.|+.+ ..+.+||
T Consensus 95 ~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 174 (357)
T 2uvk_A 95 TNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFD 174 (357)
T ss_dssp TTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEE
T ss_pred CCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEe
Confidence 76533221111 1222222222567788888764 4689999
Q ss_pred cCCCeEEEEeeCCCCCCc-cEEEEeCCCCEEEEEEc------CCeEEEEEc--CCcceeceeeeecCCccccceEEEEEc
Q 009597 399 FGIPVVIKYISEPHMHSM-PSISLHPNTNWLAAQSL------DNQILIYST--RERFQLNKKKRFAGHIVAGYACQVNFS 469 (531)
Q Consensus 399 ~~~~~~~~~~~~~~~~~v-~~v~~sp~~~~l~s~s~------Dg~I~iwd~--~~~~~~~~~~~~~~~~~~~~v~~l~~s 469 (531)
..+..-...-..+..... .+++.. ++++++.|+. ...+.+||+ .+. ....+..+.... ......+..
T Consensus 175 ~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~-~W~~~~~~~~~~--~~~~~~~~~ 250 (357)
T 2uvk_A 175 PSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNL-KWNKLAPVSSPD--GVAGGFAGI 250 (357)
T ss_dssp TTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---C-EEEECCCSSTTT--CCBSCEEEE
T ss_pred CCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCC-cEEecCCCCCCc--ccccceEEE
Confidence 988765443322222222 334333 5666666653 345777876 322 111111111110 001111223
Q ss_pred CCCCEEEEEeCC----------------------CcEEEEECCCC--eEEEEeeccCCcEEEEEEecCCCCEEEEEeCCC
Q 009597 470 PDGRFVMSGDGE----------------------GKCWFWDWKSC--KVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 470 pdg~~l~sgs~d----------------------g~I~iwd~~~~--~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg 525 (531)
.++.+++.|+.+ ..+.+||+.+. +.+..+........++. - ++.+++.||.++
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~-~~~i~v~GG~~~ 327 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--W-NNSLLIIGGETA 327 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--E-TTEEEEEEEECG
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE--e-CCEEEEEeeeCC
Confidence 356777777632 25778998754 34443332222222222 2 567788888654
No 324
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.41 E-value=0.85 Score=44.99 Aligned_cols=237 Identities=10% Similarity=0.030 Sum_probs=119.9
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEcc-------C-CCcceEEEEccCCC-CCcEEEEeeC------
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS-------T-GKIPYVVKLNPDDD-KQNILLAGMS------ 348 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~-------~-~~~~~~~~~~~~~~-~~~~l~sg~~------ 348 (531)
-...+.|+|.|+|+.|+.+...|.|++++.. +.....+. . ......+.++++-. ++.+.++-..
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 3457899999999834455668999999853 33211111 1 11224455555310 2244444332
Q ss_pred -CCeEEEEECCCC--c--eeEE-Ecc------cCCCeeEEEEecCCCEEEEEeCC-------------CCEEEEEcCCCe
Q 009597 349 -DKKIVQWDMNTK--E--ITQE-YDQ------HLGAVNTITFVDSNRRFVTSSDD-------------KSLRVWEFGIPV 403 (531)
Q Consensus 349 -dg~I~iwd~~t~--~--~~~~-~~~------h~~~I~~l~~sp~~~~l~s~s~D-------------g~I~iwd~~~~~ 403 (531)
...|..|++... . .... +.. .......|+|.|+|.++++.+.. |.|.-++.....
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235666766433 1 1111 111 11123679999999766665442 346555654320
Q ss_pred ------------EEEEeeCCCCCCccEEEEeC-CCCEEEEEEcCC--eEEEEEcCCcce---------------------
Q 009597 404 ------------VIKYISEPHMHSMPSISLHP-NTNWLAAQSLDN--QILIYSTRERFQ--------------------- 447 (531)
Q Consensus 404 ------------~~~~~~~~~~~~v~~v~~sp-~~~~l~s~s~Dg--~I~iwd~~~~~~--------------------- 447 (531)
....+.. .......++|+| ++.++++ .... .=.|.-+..+..
T Consensus 176 p~~npf~~~~~~~~~i~a~-G~rnp~gl~~d~~~g~l~~~-d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSY-GIRNPQGMAMNPWSNALWLN-EHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEE-CCSEEEEEEEETTTTEEEEE-EECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCcCCCCCCccEEEE-cCcCccceEEECCCCCEEEE-ecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCccc
Confidence 0111111 123467899999 5554444 3321 112221111100
Q ss_pred -------eceeeeecCCccccceEEEEEcC-------CCCEEEEEeCCCcEEEEECCCCeEEEEee---ccCCcEEEEEE
Q 009597 448 -------LNKKKRFAGHIVAGYACQVNFSP-------DGRFVMSGDGEGKCWFWDWKSCKVFRTLK---CHEGVCIGCEW 510 (531)
Q Consensus 448 -------~~~~~~~~~~~~~~~v~~l~~sp-------dg~~l~sgs~dg~I~iwd~~~~~~~~~~~---~h~~~V~~v~~ 510 (531)
......+..+ ..++.+.|.. +|.++++.-..+.|...++..++.+.... .....+..+++
T Consensus 254 ~~~~~~~~~P~~~~~~~---~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWKDS---PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT 330 (353)
T ss_dssp BSSCTTSCCCSEEESSC---CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred CCCCCCccCCeEEeCCC---cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence 0000011111 2356677753 47777777677888888877665443321 22347899999
Q ss_pred ecCCCCEEEEEe-CCCCE
Q 009597 511 HPLEQSKVATCG-WDGLI 527 (531)
Q Consensus 511 ~p~~~~~l~t~s-~Dg~I 527 (531)
.| ++.++++.. .+|.|
T Consensus 331 ~p-dG~lyv~td~~~g~I 347 (353)
T 2g8s_A 331 GP-DGYLYVLTDESSGEL 347 (353)
T ss_dssp CT-TSCEEEEECSTTEEE
T ss_pred CC-CCcEEEEEeCCCCEE
Confidence 99 566555433 45544
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.31 E-value=0.08 Score=52.51 Aligned_cols=156 Identities=12% Similarity=0.105 Sum_probs=88.0
Q ss_pred CeeEEEEecCCCEEEEE------------eCCCCEEEEEcCC--CeEEE-EeeCC----CCCCccEEEEeC--CCC-EEE
Q 009597 372 AVNTITFVDSNRRFVTS------------SDDKSLRVWEFGI--PVVIK-YISEP----HMHSMPSISLHP--NTN-WLA 429 (531)
Q Consensus 372 ~I~~l~~sp~~~~l~s~------------s~Dg~I~iwd~~~--~~~~~-~~~~~----~~~~v~~v~~sp--~~~-~l~ 429 (531)
..-.|...|+|..++++ ..+|.|.++|..+ ..... .+... .......+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34566667766555554 2689999999874 22221 12111 223556677765 343 344
Q ss_pred EE-Ec--CCeEEEEEcCCc-ceeceeeeecCCccccceEEEEEcCCCCEEEEEe-----------------CCCcEEEEE
Q 009597 430 AQ-SL--DNQILIYSTRER-FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD-----------------GEGKCWFWD 488 (531)
Q Consensus 430 s~-s~--Dg~I~iwd~~~~-~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs-----------------~dg~I~iwd 488 (531)
++ .. +.+|.+|++... ........+.+.. -...+.+.+.++|.+.++.. ..|.|+.+|
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~-~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKL-LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTT-CSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCC-CCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 43 33 467888877643 2333344555433 34578899999999888765 124566666
Q ss_pred CCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEeeC
Q 009597 489 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531 (531)
Q Consensus 489 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iWD 531 (531)
.. +. ..+...-..-+.++|+|++..++++-+..+.|..||
T Consensus 210 ~~--~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~ 249 (355)
T 3sre_A 210 PN--DV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYE 249 (355)
T ss_dssp TT--CC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred CC--eE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEE
Confidence 53 22 222222234689999994444444445567777664
No 326
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.17 E-value=0.98 Score=43.42 Aligned_cols=195 Identities=7% Similarity=0.073 Sum_probs=99.7
Q ss_pred EccCCCEEEEEec----CC-------eEEEEeCCCCcEEEEcc--CCCcceEEEEccCCCCCcEEEEeeCC-------Ce
Q 009597 292 FCNDGTKFLTASY----DK-------NIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMSD-------KK 351 (531)
Q Consensus 292 fspdg~~l~s~s~----Dg-------~I~vWd~~t~~~i~~~~--~~~~~~~~~~~~~~~~~~~l~sg~~d-------g~ 351 (531)
...++..++.|+. ++ .+.+||..+.+....-. .......+... ++.+++.|+.+ ..
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~ 128 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV----DDKIYVVAGKDLQTEASLDS 128 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE----TTEEEEEEEEBTTTCCEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE----CCEEEEEcCccCCCCcccce
Confidence 3456777888873 11 27788888776543321 11111222221 23577777654 35
Q ss_pred EEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeC------CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCC
Q 009597 352 IVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD------DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNT 425 (531)
Q Consensus 352 I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~------Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~ 425 (531)
+.+||+.+.+-...-..........+...+++.++.|+. -..+.+||..+..-...-..+....-.+++.. ++
T Consensus 129 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~ 207 (318)
T 2woz_A 129 VLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KG 207 (318)
T ss_dssp EEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT
T ss_pred EEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CC
Confidence 888898876543321111111111122246677777764 23589999988765443222222222333333 56
Q ss_pred CEEEEEEcC-----CeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC--------------CcEEE
Q 009597 426 NWLAAQSLD-----NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE--------------GKCWF 486 (531)
Q Consensus 426 ~~l~s~s~D-----g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d--------------g~I~i 486 (531)
++++.|+.+ ..+.+||+.+.. ...+..+.... .... ++ ..++++++.|+.+ ..+.+
T Consensus 208 ~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r--~~~~-~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~ 282 (318)
T 2woz_A 208 KIVIAGGVTEDGLSASVEAFDLKTNK-WEVMTEFPQER--SSIS-LV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWK 282 (318)
T ss_dssp EEEEEEEEETTEEEEEEEEEETTTCC-EEECCCCSSCC--BSCE-EE-EETTEEEEECCBCCBC----CCBCCBCCCEEE
T ss_pred EEEEEcCcCCCCccceEEEEECCCCe-EEECCCCCCcc--cceE-EE-EECCEEEEECCeeccCCCCceeccceeeeEEE
Confidence 777777654 357788887642 11112121111 1111 22 2356777777643 35888
Q ss_pred EECCCCeEEE
Q 009597 487 WDWKSCKVFR 496 (531)
Q Consensus 487 wd~~~~~~~~ 496 (531)
||..+.+-..
T Consensus 283 yd~~~~~W~~ 292 (318)
T 2woz_A 283 YEDDKKEWAG 292 (318)
T ss_dssp EETTTTEEEE
T ss_pred EeCCCCEehh
Confidence 9988765443
No 327
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.09 E-value=0.24 Score=49.01 Aligned_cols=147 Identities=18% Similarity=0.231 Sum_probs=80.8
Q ss_pred cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCe-EEEEee--CCCCCCccEEEEeCC---CCEEEEEEc----C----
Q 009597 369 HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPV-VIKYIS--EPHMHSMPSISLHPN---TNWLAAQSL----D---- 434 (531)
Q Consensus 369 h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~-~~~~~~--~~~~~~v~~v~~sp~---~~~l~s~s~----D---- 434 (531)
.......|+|.|++++++ +..++.|+++|. .+. .+..+. .........++++|+ +..|.++.. +
T Consensus 27 ~l~~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp SCSCEEEEEEEETTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCCeEEEEcCCCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 345678999999997554 456699999973 444 222111 112345788999997 445554443 3
Q ss_pred CeEEEEEcCCcc-eec----eeeeecCCccccceEEEEEcCCCCEEEEEeC-------------CCcEEEEECCCC----
Q 009597 435 NQILIYSTRERF-QLN----KKKRFAGHIVAGYACQVNFSPDGRFVMSGDG-------------EGKCWFWDWKSC---- 492 (531)
Q Consensus 435 g~I~iwd~~~~~-~~~----~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~-------------dg~I~iwd~~~~---- 492 (531)
+.|..|+..... .+. .+..+.... ......|+|.|||.++++.+. .|.|.-++....
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~-~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAY-IHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCS-SCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCC-CcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 677788765431 111 111111110 112345899999987776432 245666664321
Q ss_pred -----eEEEEeeccCCcEEEEEEecCCCCEEEE
Q 009597 493 -----KVFRTLKCHEGVCIGCEWHPLEQSKVAT 520 (531)
Q Consensus 493 -----~~~~~~~~h~~~V~~v~~~p~~~~~l~t 520 (531)
..+. ..+|.. ...++|+|..+.++++
T Consensus 184 npf~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 184 NPFPNSPIW-SYGHRN-PQGIDWHRASGVMVAT 214 (354)
T ss_dssp SSSTTCCEE-EECCSC-CCEEEECTTTCCEEEE
T ss_pred CCCCCCcEE-EEccCC-cceEEEeCCCCCEEEE
Confidence 0111 124444 3689999955554444
No 328
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.06 E-value=0.38 Score=49.42 Aligned_cols=109 Identities=11% Similarity=0.129 Sum_probs=62.1
Q ss_pred CCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEE--EeeCC-----CCCCccEEEEeCC---CCEEEEEEc------
Q 009597 370 LGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIK--YISEP-----HMHSMPSISLHPN---TNWLAAQSL------ 433 (531)
Q Consensus 370 ~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~--~~~~~-----~~~~v~~v~~sp~---~~~l~s~s~------ 433 (531)
....+.|+|.|+|+++++-...+.|++++...+.... .+... ....+..|+|+|+ +.+|.+...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 4566799999999877765544578888765443322 22211 2345668999995 555554442
Q ss_pred -------CCeEEEEEcCCcc-ee---c-eeeeecCCccccceEEEEEcCCCCEEEEEe
Q 009597 434 -------DNQILIYSTRERF-QL---N-KKKRFAGHIVAGYACQVNFSPDGRFVMSGD 479 (531)
Q Consensus 434 -------Dg~I~iwd~~~~~-~~---~-~~~~~~~~~~~~~v~~l~~spdg~~l~sgs 479 (531)
...|..|+..... .+ . .+..+... .......|+|.|||.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~-~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSS-KDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCC-SSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCC-CCCCCCeEeECCCCeEEEEEC
Confidence 2356666553210 11 1 11112211 123467799999998877654
No 329
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.01 E-value=0.23 Score=49.05 Aligned_cols=106 Identities=13% Similarity=0.188 Sum_probs=61.1
Q ss_pred CCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEE--EEee--CCCCCCccEEEEeCC---CCEEEEEEc-C-----Ce
Q 009597 370 LGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVI--KYIS--EPHMHSMPSISLHPN---TNWLAAQSL-D-----NQ 436 (531)
Q Consensus 370 ~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~--~~~~--~~~~~~v~~v~~sp~---~~~l~s~s~-D-----g~ 436 (531)
......|+|.|+|+++++ ..++.|++++ .+... ..+. .........++++|+ +..|.++.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 445679999999985555 5669999998 33321 1111 112346789999998 455554443 2 67
Q ss_pred EEEEEcCCccee---ceeeeecC-CccccceEEEEEcCCCCEEEEE
Q 009597 437 ILIYSTRERFQL---NKKKRFAG-HIVAGYACQVNFSPDGRFVMSG 478 (531)
Q Consensus 437 I~iwd~~~~~~~---~~~~~~~~-~~~~~~v~~l~~spdg~~l~sg 478 (531)
|..|+....... ..+..+.. .........++|.|+|.+.++.
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 888887643110 01111220 0001123459999999776664
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.69 E-value=0.46 Score=51.65 Aligned_cols=198 Identities=9% Similarity=0.086 Sum_probs=106.5
Q ss_pred cCCCEEEEEecC----CeEEEEeCCCCcEEEEc-c-------CCCcceEEEEccCCCCCcEEEEeeCC------CeEEEE
Q 009597 294 NDGTKFLTASYD----KNIKYWDTETGQVIRTF-S-------TGKIPYVVKLNPDDDKQNILLAGMSD------KKIVQW 355 (531)
Q Consensus 294 pdg~~l~s~s~D----g~I~vWd~~t~~~i~~~-~-------~~~~~~~~~~~~~~~~~~~l~sg~~d------g~I~iw 355 (531)
-++..++.||.+ ..+.+||..+++....- . .......+..... ++.+++.|+.+ ..+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~--~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR--NNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT--TTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc--CCEEEEEcCCCCCCCccccEEEE
Confidence 456677777753 46888898877654332 1 1111222222210 23577777654 357889
Q ss_pred ECCCCceeEEEcccCCCe-eEEEEecCCCEEEEEeCCC--CEEEEEcCCCeEEEEee---CCC-CCCccEEEEeCC-CCE
Q 009597 356 DMNTKEITQEYDQHLGAV-NTITFVDSNRRFVTSSDDK--SLRVWEFGIPVVIKYIS---EPH-MHSMPSISLHPN-TNW 427 (531)
Q Consensus 356 d~~t~~~~~~~~~h~~~I-~~l~~sp~~~~l~s~s~Dg--~I~iwd~~~~~~~~~~~---~~~-~~~v~~v~~sp~-~~~ 427 (531)
|+.+.+-...-....... .+++...+++.++.|+.++ .+.+||..+......-. .+. .....++.+..+ +++
T Consensus 474 d~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp ETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred eCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 988754332211111111 2333334788888888755 69999998876543321 111 112233555655 667
Q ss_pred EEEEEcC-------CeEEEEEcCCcce-----eceeeeecCCccccceEEEEEcCCCCEEEEEeC--------CCcEEEE
Q 009597 428 LAAQSLD-------NQILIYSTRERFQ-----LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG--------EGKCWFW 487 (531)
Q Consensus 428 l~s~s~D-------g~I~iwd~~~~~~-----~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~--------dg~I~iw 487 (531)
++.|+.+ +.+.+||+.+..- ...+.... .....-.+++...++.+++.|+. ...|.+|
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p--~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP--LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECG--GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCC--CCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEE
Confidence 7777762 4688999877641 11111110 00111112333333777777774 3469999
Q ss_pred ECCCCeEE
Q 009597 488 DWKSCKVF 495 (531)
Q Consensus 488 d~~~~~~~ 495 (531)
|..+.+-.
T Consensus 632 d~~t~~W~ 639 (695)
T 2zwa_A 632 DPLSETLT 639 (695)
T ss_dssp ETTTTEEE
T ss_pred ECCCCeEE
Confidence 99887654
No 331
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.62 E-value=0.95 Score=45.59 Aligned_cols=142 Identities=11% Similarity=0.229 Sum_probs=90.2
Q ss_pred ccCCCEEEEEecCCeEEEEeCCCCcEEEEccCCC-----cceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCc------
Q 009597 293 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-----IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE------ 361 (531)
Q Consensus 293 spdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~~-----~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~------ 361 (531)
+.+|+.++.+- ++.||.-++......+.+.... ....+.+++++ .+|+.. .+..|.|..+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG---~lLAl~-g~~~V~Vv~LP~~~~~~~~~ 103 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSG---DLLCLF-NDNEIFVMEVPWGYSNVEDV 103 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTS---SEEEEE-CSSEEEEEECCTTCSCCCCH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCC---CEEEEe-cCCeEEEEEecCccccCccc
Confidence 34666666665 4788888877544444544432 34456666654 344444 46688888886321
Q ss_pred ------eeEEEcc------cCCCeeEEEEec---CCCEEEEEeCCCCEEEEEcCCCe--EEEEee--------CCCCCCc
Q 009597 362 ------ITQEYDQ------HLGAVNTITFVD---SNRRFVTSSDDKSLRVWEFGIPV--VIKYIS--------EPHMHSM 416 (531)
Q Consensus 362 ------~~~~~~~------h~~~I~~l~~sp---~~~~l~s~s~Dg~I~iwd~~~~~--~~~~~~--------~~~~~~v 416 (531)
..+.+.. ...+|..+.|+| .+..|++-..|+.|++||+.... +. .+. ......|
T Consensus 104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCE
T ss_pred ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceE
Confidence 1223332 246799999999 45689999999999999997521 11 111 1122568
Q ss_pred cEEEEeCCCCEEEEEE--cCCeEEEE
Q 009597 417 PSISLHPNTNWLAAQS--LDNQILIY 440 (531)
Q Consensus 417 ~~v~~sp~~~~l~s~s--~Dg~I~iw 440 (531)
.+++|.+++-.|.+.+ ..|-|+-.
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 8999999887777766 77777543
No 332
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.47 E-value=1.4 Score=40.15 Aligned_cols=177 Identities=9% Similarity=-0.067 Sum_probs=91.8
Q ss_pred cEEEEeeCCCeEEEEECCCCc------eeEEEcc-cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCe------EEEE
Q 009597 341 NILLAGMSDKKIVQWDMNTKE------ITQEYDQ-HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPV------VIKY 407 (531)
Q Consensus 341 ~~l~sg~~dg~I~iwd~~t~~------~~~~~~~-h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~------~~~~ 407 (531)
.+|++...| +|+.=...++. ....+-. --..+..++|+|++.+.++ .+|.+.-.+..+.. .-..
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence 345555556 55554444333 1222211 1247889999999887666 66766555543311 0122
Q ss_pred eeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceece--eeeecCCccccceEEEEEcCCCCEEEEEeCCCcEE
Q 009597 408 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK--KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 485 (531)
Q Consensus 408 ~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~--~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~ 485 (531)
+-..--....++.|.|+|.+.++ .||.|.-++-.+.....- .....+...-..+..|.|.|+|.+.++. ++.++
T Consensus 82 IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 82 IGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp EECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred ecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 21111122588999999998877 679888776533111100 0001011011346779999999888777 77765
Q ss_pred EEECCCCe------EEEEee-ccCCcEEEEEEecCCCCEEEEEeCCCCE
Q 009597 486 FWDWKSCK------VFRTLK-CHEGVCIGCEWHPLEQSKVATCGWDGLI 527 (531)
Q Consensus 486 iwd~~~~~------~~~~~~-~h~~~V~~v~~~p~~~~~l~t~s~Dg~I 527 (531)
-+...+.. ....+. ..-.....+.|.+ ++.+.+.. +|.|
T Consensus 158 r~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~-~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 158 KALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS-VGTLFGVQ--GGKF 203 (236)
T ss_dssp EECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT-TSCEEEEE--TTEE
T ss_pred ecCCCCCCCcccccccceeccCCcceEEEEEECC-CCcEEEEe--CCeE
Confidence 43322111 011111 2222344566777 55544443 6644
No 333
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.42 E-value=0.19 Score=49.79 Aligned_cols=148 Identities=11% Similarity=0.111 Sum_probs=77.5
Q ss_pred CCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEee------CCCCCCccEEEEeCC---CCEEEEE-Ec------
Q 009597 370 LGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYIS------EPHMHSMPSISLHPN---TNWLAAQ-SL------ 433 (531)
Q Consensus 370 ~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~------~~~~~~v~~v~~sp~---~~~l~s~-s~------ 433 (531)
......|+|.|++++|+++...|.|++++.. +.....+. .........++++|+ +.+|.+. +.
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 3456899999999834455567899999853 32211111 112335678999995 4444444 33
Q ss_pred -CCeEEEEEcCCcc-eecee----eeecC-CccccceEEEEEcCCCCEEEEEeC-------------CCcEEEEECCCCe
Q 009597 434 -DNQILIYSTRERF-QLNKK----KRFAG-HIVAGYACQVNFSPDGRFVMSGDG-------------EGKCWFWDWKSCK 493 (531)
Q Consensus 434 -Dg~I~iwd~~~~~-~~~~~----~~~~~-~~~~~~v~~l~~spdg~~l~sgs~-------------dg~I~iwd~~~~~ 493 (531)
...|..|++.... .+... ..+.. .........|.|.|||.++++.+. .|.|.-++....-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 2356666664321 11111 11110 000112345999999966655433 2467777754320
Q ss_pred ------------EEEEe-eccCCcEEEEEEecCCCCEEE
Q 009597 494 ------------VFRTL-KCHEGVCIGCEWHPLEQSKVA 519 (531)
Q Consensus 494 ------------~~~~~-~~h~~~V~~v~~~p~~~~~l~ 519 (531)
....+ .+|. ....++|+|..+.+++
T Consensus 176 p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~ 213 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWL 213 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEE
T ss_pred CCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEE
Confidence 11111 2343 3578999994444433
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.42 E-value=0.62 Score=45.89 Aligned_cols=153 Identities=16% Similarity=0.169 Sum_probs=86.2
Q ss_pred EEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEE--ee---CCCCCCccEEEEeCC---CCEEEEE-E--
Q 009597 364 QEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKY--IS---EPHMHSMPSISLHPN---TNWLAAQ-S-- 432 (531)
Q Consensus 364 ~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~--~~---~~~~~~v~~v~~sp~---~~~l~s~-s-- 432 (531)
..+.......+.|+|.|+|++|++--..|.|++++...+..... +. .........|+++|+ +.+|.+. +
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 34444456778999999999777766589999998665543221 11 113456789999995 3444443 2
Q ss_pred cCCeEEEEEcCCcc----eec----eeeeecCCccccceEEEEEcCCCCEEEEEeC-------------CCcEEEEECCC
Q 009597 433 LDNQILIYSTRERF----QLN----KKKRFAGHIVAGYACQVNFSPDGRFVMSGDG-------------EGKCWFWDWKS 491 (531)
Q Consensus 433 ~Dg~I~iwd~~~~~----~~~----~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~-------------dg~I~iwd~~~ 491 (531)
.++.|.-|.+.... .+. .+..+... .......|.|.|||.+.++.+. .|.|.-.+...
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~-~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKG-VIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCC-SSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCC-CCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 34566667655411 111 11112110 1122445899999987777542 35555555432
Q ss_pred C---------eEEEEeeccCCcEEEEEEecCCCCEEEE
Q 009597 492 C---------KVFRTLKCHEGVCIGCEWHPLEQSKVAT 520 (531)
Q Consensus 492 ~---------~~~~~~~~h~~~V~~v~~~p~~~~~l~t 520 (531)
. ..+.. .+|.. ...++|+| .+.+.++
T Consensus 184 ~ip~~nPf~~~~i~a-~G~RN-p~Gla~dp-~G~L~~~ 218 (347)
T 3das_A 184 EPAPGNPFPGSPVYS-YGHRN-VQGLAWDD-KQRLFAS 218 (347)
T ss_dssp SBCTTCSSTTCCEEE-BCCSB-CCEEEECT-TCCEEEE
T ss_pred CccCCCCCCCCeEEe-eCCCC-cceEEECC-CCCEEEE
Confidence 1 11111 25554 46899999 5654443
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.28 E-value=0.55 Score=46.05 Aligned_cols=195 Identities=11% Similarity=0.118 Sum_probs=95.4
Q ss_pred CCCEEEEEec-C---------CeEEEEeCCCCcEEEEccCC---CcceEEEEccCCCCCcEEEEeeCC------------
Q 009597 295 DGTKFLTASY-D---------KNIKYWDTETGQVIRTFSTG---KIPYVVKLNPDDDKQNILLAGMSD------------ 349 (531)
Q Consensus 295 dg~~l~s~s~-D---------g~I~vWd~~t~~~i~~~~~~---~~~~~~~~~~~~~~~~~l~sg~~d------------ 349 (531)
++.+++.|+. + ..+.+||+.+.+-...-... .....+.. . ++.+++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~---~~~iyv~GG~~~~~~~~~~~~~~ 140 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-H---NGKAYVTGGVNQNIFNGYFEDLN 140 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-E---TTEEEEEECCCHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-E---CCEEEEEeCcCCCcCcccccchh
Confidence 5666666665 2 46889999887654432222 11122222 2 23677888754
Q ss_pred ---------------------------CeEEEEECCCCceeEEEcccC-CCe-eEEEEecCCCEEEEEeC------CCCE
Q 009597 350 ---------------------------KKIVQWDMNTKEITQEYDQHL-GAV-NTITFVDSNRRFVTSSD------DKSL 394 (531)
Q Consensus 350 ---------------------------g~I~iwd~~t~~~~~~~~~h~-~~I-~~l~~sp~~~~l~s~s~------Dg~I 394 (531)
..+.+||+.+.+-...-.... ... .+++.. +++.++.|+. ...+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v 219 (357)
T 2uvk_A 141 EAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAV 219 (357)
T ss_dssp HHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCE
T ss_pred hcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCce
Confidence 578999998765333221111 111 233333 5667777654 3457
Q ss_pred EEEEc--CCCeEEEEeeCCCCC-CccEEEEeCCCCEEEEEEcC----------------------CeEEEEEcCCcceec
Q 009597 395 RVWEF--GIPVVIKYISEPHMH-SMPSISLHPNTNWLAAQSLD----------------------NQILIYSTRERFQLN 449 (531)
Q Consensus 395 ~iwd~--~~~~~~~~~~~~~~~-~v~~v~~sp~~~~l~s~s~D----------------------g~I~iwd~~~~~~~~ 449 (531)
.+||+ .+..-...-..+... ...+.+...++++++.|+.+ ..+.+||+.+.. ..
T Consensus 220 ~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~-W~ 298 (357)
T 2uvk_A 220 FELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK-WD 298 (357)
T ss_dssp EEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----CE
T ss_pred EEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc-ee
Confidence 77887 444332211111111 11222223366777777642 257788887542 11
Q ss_pred eeeeecCCccccceEEEEEcCCCCEEEEEeCCC------cEEEEECCCCeEEEEee
Q 009597 450 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG------KCWFWDWKSCKVFRTLK 499 (531)
Q Consensus 450 ~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg------~I~iwd~~~~~~~~~~~ 499 (531)
.+..+.... .... +...++++++.|+.++ .|.++++++++.+....
T Consensus 299 ~~~~~p~~r--~~~~--~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 299 KSGELSQGR--AYGV--SLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp EEEECSSCC--BSSE--EEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eCCCCCCCc--ccce--eEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 122222111 1111 2234677888888543 36667888877665543
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.23 E-value=3.4 Score=43.02 Aligned_cols=229 Identities=8% Similarity=0.128 Sum_probs=127.6
Q ss_pred EEEEecCCeEEEEeCCCCcEEEEccCCCc----------------------------ceEEEEccCCCCCcEEEEee-CC
Q 009597 299 FLTASYDKNIKYWDTETGQVIRTFSTGKI----------------------------PYVVKLNPDDDKQNILLAGM-SD 349 (531)
Q Consensus 299 l~s~s~Dg~I~vWd~~t~~~i~~~~~~~~----------------------------~~~~~~~~~~~~~~~l~sg~-~d 349 (531)
|.||+..|.|+|+-+.+++.+..+..-.. ...+++.--.-.+++|+.-. .+
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 77899999999999998888877642110 00111110001123344433 55
Q ss_pred CeEEEEECCCCceeEEEcc-cCCCeeEEEEe--cCCCEEEEEeC-------CCCEE---------E---EEcCCCeEEEE
Q 009597 350 KKIVQWDMNTKEITQEYDQ-HLGAVNTITFV--DSNRRFVTSSD-------DKSLR---------V---WEFGIPVVIKY 407 (531)
Q Consensus 350 g~I~iwd~~t~~~~~~~~~-h~~~I~~l~~s--p~~~~l~s~s~-------Dg~I~---------i---wd~~~~~~~~~ 407 (531)
..|-..++...++-+.+.. ....+.++.|. |+..+++.++. ||... + .|..+.+....
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~Q 232 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAFQ 232 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEEE
Confidence 6777788887776665543 34577888886 67778887775 33311 1 12222222111
Q ss_pred eeCCCCCCccEEEEeCCCCEEEEEEcC---------------CeEEEEEcCC---------cceec--eeeeecCCc---
Q 009597 408 ISEPHMHSMPSISLHPNTNWLAAQSLD---------------NQILIYSTRE---------RFQLN--KKKRFAGHI--- 458 (531)
Q Consensus 408 ~~~~~~~~v~~v~~sp~~~~l~s~s~D---------------g~I~iwd~~~---------~~~~~--~~~~~~~~~--- 458 (531)
+.. ....-.+...++++|.++.+.+ ..|.++++.. ...+. .+..+.+..
T Consensus 233 v~v--~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~ 310 (638)
T 3sbq_A 233 VIV--DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDG 310 (638)
T ss_dssp EEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTT
T ss_pred EEc--CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccccc
Confidence 111 2234455567788888887743 1355555421 01111 111221111
Q ss_pred ----------cccceEEEEEcCCCCEEEEEe-CCCcEEEEECCC------CeE-------EEEeeccCCcEEEEEEecCC
Q 009597 459 ----------VAGYACQVNFSPDGRFVMSGD-GEGKCWFWDWKS------CKV-------FRTLKCHEGVCIGCEWHPLE 514 (531)
Q Consensus 459 ----------~~~~v~~l~~spdg~~l~sgs-~dg~I~iwd~~~------~~~-------~~~~~~h~~~V~~v~~~p~~ 514 (531)
.......+.++|||+++++++ .+.++.++|+.. .+. ......-. .....+|.+ .
T Consensus 311 ~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl-GPlHt~Fd~-~ 388 (638)
T 3sbq_A 311 KDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL-GPLHTTFDG-R 388 (638)
T ss_dssp BCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS-CEEEEEECS-S
T ss_pred cCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC-cccEEEECC-C
Confidence 011122378999999998776 577899999873 121 33333223 457889998 5
Q ss_pred CCEEEEEeCCCCEEeeC
Q 009597 515 QSKVATCGWDGLIKYWD 531 (531)
Q Consensus 515 ~~~l~t~s~Dg~I~iWD 531 (531)
+....|.--|..|.-||
T Consensus 389 G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 389 GNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp SEEEEEETTTTEEEEEE
T ss_pred CceEeeeeecceEEEEe
Confidence 55555566799998886
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.21 E-value=2.6 Score=41.38 Aligned_cols=241 Identities=12% Similarity=0.077 Sum_probs=124.4
Q ss_pred eEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEE--EEcc-----CCCcceEEEEccCCC-CCcEEEEe--
Q 009597 277 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVI--RTFS-----TGKIPYVVKLNPDDD-KQNILLAG-- 346 (531)
Q Consensus 277 ~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i--~~~~-----~~~~~~~~~~~~~~~-~~~~l~sg-- 346 (531)
+..+...-..-+.|+|.|||++|++--..|.|++++..+++.. ..+. ......-+.++++-. ++.+.++-
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 3444445567899999999987666655899999987666542 2221 122234566665311 22333321
Q ss_pred eCCCeEEEEECCCC----------cee-EEEcc-cCCCeeEEEEecCCCEEEEEeC-------------CCCEEEEEcCC
Q 009597 347 MSDKKIVQWDMNTK----------EIT-QEYDQ-HLGAVNTITFVDSNRRFVTSSD-------------DKSLRVWEFGI 401 (531)
Q Consensus 347 ~~dg~I~iwd~~t~----------~~~-~~~~~-h~~~I~~l~~sp~~~~l~s~s~-------------Dg~I~iwd~~~ 401 (531)
..++.|.-|.+..+ +.+ ..+.. .......|.|.|+|.++++.++ -|.|.-.+...
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 24556666766541 111 12221 1123467999999998887653 24444444432
Q ss_pred Ce-------EEEEeeCCCCCCccEEEEeCCCCEEEEEE-cCCeEEEEEcCCcce---------------eceeeeecCCc
Q 009597 402 PV-------VIKYISEPHMHSMPSISLHPNTNWLAAQS-LDNQILIYSTRERFQ---------------LNKKKRFAGHI 458 (531)
Q Consensus 402 ~~-------~~~~~~~~~~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~~~~~---------------~~~~~~~~~~~ 458 (531)
.. ....+..++ .....++|+|++.++++-. .++.-.|.-+..+.. ......+..+.
T Consensus 184 ~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~ 262 (347)
T 3das_A 184 EPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDE 262 (347)
T ss_dssp SBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTT
T ss_pred CccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCC
Confidence 10 001122222 3467899999877665532 222222222222110 00011111110
Q ss_pred cccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE----EEEeeccCCcEEEEEEecCCCCEEEEEe
Q 009597 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV----FRTLKCHEGVCIGCEWHPLEQSKVATCG 522 (531)
Q Consensus 459 ~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~----~~~~~~h~~~V~~v~~~p~~~~~l~t~s 522 (531)
...+.++|. +|.+++..-..+.|....+..... ...+.+..+.+..|+..| ++.++++.+
T Consensus 263 --~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~p-DG~lyv~td 326 (347)
T 3das_A 263 --ASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAG-GDKLWLVTS 326 (347)
T ss_dssp --CCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEE-TTEEEEEEC
T ss_pred --CCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECC-CCcEEEEEc
Confidence 124556666 455565555666776666654432 222334456799999999 666555543
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.21 E-value=4.5 Score=44.09 Aligned_cols=231 Identities=14% Similarity=0.094 Sum_probs=126.2
Q ss_pred CceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEcc-CC----CcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC
Q 009597 285 KAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS-TG----KIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT 359 (531)
Q Consensus 285 ~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~-~~----~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t 359 (531)
..|.++.-..+|+ |..|+ ++-|..++..+++...-.. .. ....+.++..+.. ..|..|+..+-|.++|..+
T Consensus 373 ~~v~~i~~d~~g~-lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~--g~lWigT~~~Gl~~~~~~~ 448 (758)
T 3ott_A 373 NRIRHIYEDKEQQ-LWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTA--GQLWISTCLGGIFVVDKHK 448 (758)
T ss_dssp SCEEEEEECTTSC-EEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTT--SEEEEEESSSCEEEEEHHH
T ss_pred CceEEEEECCCCC-EEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCC--CCEEEEECCCceEEEcccc
Confidence 3589998887776 55566 4579999998876543221 11 1123444444433 3566677776788888542
Q ss_pred C-----cee---EEEcc----cCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCC--CCCccEEEEeCCC
Q 009597 360 K-----EIT---QEYDQ----HLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH--MHSMPSISLHPNT 425 (531)
Q Consensus 360 ~-----~~~---~~~~~----h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~--~~~v~~v~~sp~~ 425 (531)
. ... ..+.. ....|.+|...++|+..+.++..+-|..+|..+........... ...+.++....+|
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g 528 (758)
T 3ott_A 449 LMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDG 528 (758)
T ss_dssp HHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTS
T ss_pred ccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCC
Confidence 1 111 12221 12358889888888876644444558889998776554322111 2356677777777
Q ss_pred CEEEEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcE
Q 009597 426 NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 505 (531)
Q Consensus 426 ~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V 505 (531)
.+.+ |+.. -|..|+..+.... ... ..+- ....+.++... +| .|..++..| |..+|..+.+... +......+
T Consensus 529 ~lWi-gt~~-Gl~~~~~~~~~~~-~~~-~~gl-~~~~i~~i~~~-~g-~lWi~t~~G-l~~~~~~~~~~~~-~~~~~~~~ 599 (758)
T 3ott_A 529 LLWV-GFHG-GVMRINPKDESQQ-SIS-FGSF-SNNEILSMTCV-KN-SIWVSTTNG-LWIIDRKTMDARQ-QNMTNKRF 599 (758)
T ss_dssp CEEE-EETT-EEEEECC--CCCC-BCC-CCC----CCEEEEEEE-TT-EEEEEESSC-EEEEETTTCCEEE-C--CCCCC
T ss_pred CEEE-EecC-ceEEEecCCCceE-Eec-ccCC-CccceEEEEEC-CC-CEEEECCCC-eEEEcCCCceeEE-ecCCCCce
Confidence 7654 4554 5888886654221 111 1111 12346666653 55 455566655 7778887765432 21112223
Q ss_pred EEEEEecCCCCEEEEEeCCCCEEe
Q 009597 506 IGCEWHPLEQSKVATCGWDGLIKY 529 (531)
Q Consensus 506 ~~v~~~p~~~~~l~t~s~Dg~I~i 529 (531)
....+.. ....|.-|+.+|.+.+
T Consensus 600 ~~~~~~~-~~G~l~fG~~~Gl~~f 622 (758)
T 3ott_A 600 TSLLFDP-KEDCVYLGGADGFGIS 622 (758)
T ss_dssp SEEEEET-TTTEEEEECBSEEEEE
T ss_pred eeeEEEC-CCCcEEEecCCceEEE
Confidence 3344443 2335666777776543
No 339
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.10 E-value=2.7 Score=40.86 Aligned_cols=183 Identities=12% Similarity=0.165 Sum_probs=115.9
Q ss_pred CceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCC-CcEEEEccCCC---cceEEEEccCCC
Q 009597 263 GEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGK---IPYVVKLNPDDD 338 (531)
Q Consensus 263 ~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t-~~~i~~~~~~~---~~~~~~~~~~~~ 338 (531)
+..+.+.+..+...+..+.-. ..|.-=.|-.+. .|+-.+ +..|+-|+++. ..+.+.|..+. ...++.+..+.+
T Consensus 86 g~~LQiFnletK~klks~~~~-e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~ 162 (365)
T 2xzh_A 86 GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAK 162 (365)
T ss_dssp TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTT
T ss_pred CCeEEEechHHhhhhcceecC-CccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCC
Confidence 456888888887777776644 466666776544 455555 45899999974 34555554332 356777777776
Q ss_pred CCcEEEEee------CCCeEEEEECCCCceeEEEcccCCCeeEEEEecC---CCEEEEEeC---CCCEEEEEcCCC----
Q 009597 339 KQNILLAGM------SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDS---NRRFVTSSD---DKSLRVWEFGIP---- 402 (531)
Q Consensus 339 ~~~~l~sg~------~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~---~~~l~s~s~---Dg~I~iwd~~~~---- 402 (531)
..-++++|- -.|.+.+|..+ ....+.+.+|......+.+..+ ...|+.+.. .+.++|-++..+
T Consensus 163 ~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~ 241 (365)
T 2xzh_A 163 QKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN 241 (365)
T ss_dssp SCEEEEEEEEEETTEEEEEEEEEETT-TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTC
T ss_pred CCEEEEEeEeccCCccceeEEEEeec-ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCC
Confidence 666666664 34788899886 4556778888554433332211 113333332 257899998543
Q ss_pred ----eEEEEeeCC---CCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceec
Q 009597 403 ----VVIKYISEP---HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449 (531)
Q Consensus 403 ----~~~~~~~~~---~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~ 449 (531)
+....+.-+ ...-..++..++.-..+...+.-|.|.+||+.++.++.
T Consensus 242 ~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~ 295 (365)
T 2xzh_A 242 QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 295 (365)
T ss_dssp CCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEE
Confidence 111122111 23345577888888889999999999999999987763
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.73 E-value=1.5 Score=47.66 Aligned_cols=150 Identities=15% Similarity=0.267 Sum_probs=84.2
Q ss_pred cEEEEeeCC----CeEEEEECCCCceeEEE-c-----ccCC-CeeEEEEec-CCCEEEEEeCC------CCEEEEEcCCC
Q 009597 341 NILLAGMSD----KKIVQWDMNTKEITQEY-D-----QHLG-AVNTITFVD-SNRRFVTSSDD------KSLRVWEFGIP 402 (531)
Q Consensus 341 ~~l~sg~~d----g~I~iwd~~t~~~~~~~-~-----~h~~-~I~~l~~sp-~~~~l~s~s~D------g~I~iwd~~~~ 402 (531)
.+++.|+.+ ..+.+||+.+++-...- . .... .-.+++..+ +++.++.|+.+ ..+.+||..+.
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~ 478 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR 478 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC
Confidence 567777643 46888998876544332 1 1111 123444444 77788887754 35788999887
Q ss_pred eEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCC--eEEEEEcCCcceeceeee---ecCCccccceEEEEEcCC-CCEEE
Q 009597 403 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN--QILIYSTRERFQLNKKKR---FAGHIVAGYACQVNFSPD-GRFVM 476 (531)
Q Consensus 403 ~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg--~I~iwd~~~~~~~~~~~~---~~~~~~~~~v~~l~~spd-g~~l~ 476 (531)
.....-..+....-.+++...++++++.|+.++ .+.+||..+.. ...... .... ......+.+..+ +.+++
T Consensus 479 ~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~~--r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 479 EWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQN--SLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp EEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGGS--CCBSCEEEEETTTTEEEE
T ss_pred cEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCCc--ccceeEEEEeCCCCEEEE
Confidence 544332222222233444434788888888765 68999987643 111111 1111 111222445555 66777
Q ss_pred EEeC--C-----CcEEEEECCCCe
Q 009597 477 SGDG--E-----GKCWFWDWKSCK 493 (531)
Q Consensus 477 sgs~--d-----g~I~iwd~~~~~ 493 (531)
.|+. + ..+.+||+.+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ECCcCCCCCeeeCcEEEEEccCCc
Confidence 7765 2 358899988766
No 341
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.34 E-value=5 Score=40.54 Aligned_cols=183 Identities=12% Similarity=0.162 Sum_probs=117.3
Q ss_pred CceeeeeecccCeeeEEecCccCceEEEEEccCCCEEEEEecCCeEEEEeCCC-CcEEEEccCC---CcceEEEEccCCC
Q 009597 263 GEHVEDKSTFHGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTG---KIPYVVKLNPDDD 338 (531)
Q Consensus 263 ~~~i~~~~~~~~~~~~~l~gH~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t-~~~i~~~~~~---~~~~~~~~~~~~~ 338 (531)
+..+.+++..+...+..+.-.. .|.-=.|-.+. .|+-.+ +..|+-|+++. ..+.+.|..+ ....++.+..+.+
T Consensus 85 g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~ 161 (494)
T 1bpo_A 85 GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAK 161 (494)
T ss_dssp TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTT
T ss_pred CCeEEEEchHHhhhhcceecCC-CceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCC
Confidence 4577888887777777766544 45555565443 455555 45899999974 3455555432 2356777777776
Q ss_pred CCcEEEEee------CCCeEEEEECCCCceeEEEcccCCCeeEEEEecCC---CEEEEEeCC---CCEEEEEcCCC----
Q 009597 339 KQNILLAGM------SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSN---RRFVTSSDD---KSLRVWEFGIP---- 402 (531)
Q Consensus 339 ~~~~l~sg~------~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~---~~l~s~s~D---g~I~iwd~~~~---- 402 (531)
..-++++|- -.|.+.+|..+ ....+.+.+|.+....+.+..+. ..|+.+... +.++|-++..+
T Consensus 162 ~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~ 240 (494)
T 1bpo_A 162 QKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN 240 (494)
T ss_dssp SSEEEEEEEEEETTEEEEEEEEEEST-TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC
T ss_pred CCeEEEEeecccCCcccceEEEeecc-ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC
Confidence 666666664 34788999986 44567788886655444432211 234444442 68999998543
Q ss_pred ----eEEEEeeCC---CCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceec
Q 009597 403 ----VVIKYISEP---HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 449 (531)
Q Consensus 403 ----~~~~~~~~~---~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~ 449 (531)
+....+.-+ ...-..++..++.-..+...+.-|.|.+||+.++.++.
T Consensus 241 ~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~ 294 (494)
T 1bpo_A 241 QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (494)
T ss_dssp CCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeee
Confidence 111222111 13345578888888889999999999999999987763
No 342
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.33 E-value=0.28 Score=48.19 Aligned_cols=111 Identities=10% Similarity=0.017 Sum_probs=71.3
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEccc-CCCeeEEEEe--cCCCEEEEE--eCCCCEEEEEcCCCeEEEEeeCCCCCC
Q 009597 341 NILLAGMSDKKIVQWDMNTKEITQEYDQH-LGAVNTITFV--DSNRRFVTS--SDDKSLRVWEFGIPVVIKYISEPHMHS 415 (531)
Q Consensus 341 ~~l~sg~~dg~I~iwd~~t~~~~~~~~~h-~~~I~~l~~s--p~~~~l~s~--s~Dg~I~iwd~~~~~~~~~~~~~~~~~ 415 (531)
.++++++.||.|+-+|..+|+....+... ..++....-. +.+..++.+ +.||.|..++..++.....+..+....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 57999999999999999999999988754 1222221100 112234433 589999999998875543333211111
Q ss_pred ccEEEEe-----------CCCCEEEEEEcCCeEEEEEcCCcceecee
Q 009597 416 MPSISLH-----------PNTNWLAAQSLDNQILIYSTRERFQLNKK 451 (531)
Q Consensus 416 v~~v~~s-----------p~~~~l~s~s~Dg~I~iwd~~~~~~~~~~ 451 (531)
..-+... ..+..+++|+.+|.+...|+.++..+...
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 1112211 14567889999999999999999776544
No 343
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.10 E-value=1.1 Score=40.83 Aligned_cols=141 Identities=8% Similarity=0.037 Sum_probs=75.1
Q ss_pred ceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEE------EEccCCCc--ceEEEEccCCCCCcEEEEeeCCCeEEEEEC
Q 009597 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVI------RTFSTGKI--PYVVKLNPDDDKQNILLAGMSDKKIVQWDM 357 (531)
Q Consensus 286 ~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i------~~~~~~~~--~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~ 357 (531)
.+++++|+|+|.+.+. .+|.+.-.+..+.... ..+-...- -..+.+.+ ++.+.++ .||.|+-++.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~---~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP---NGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT---TSCEEEE--ETTEEEEESC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC---CCCEEEe--CCCEEEEeCC
Confidence 6779999999985555 6777666665442211 11111000 12233333 3344444 6699988876
Q ss_pred CCCce-------eEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCe------EEEEeeCCCCCCccEEEEeCC
Q 009597 358 NTKEI-------TQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPV------VIKYISEPHMHSMPSISLHPN 424 (531)
Q Consensus 358 ~t~~~-------~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~------~~~~~~~~~~~~v~~v~~sp~ 424 (531)
.+... ...-..-=..+..|.|.|+|.+.+.. |+.+.-+..-... ....+.....+..+.+.|.++
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~ 192 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV 192 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCC
Confidence 33211 11111122567899999999887777 6664322211100 011222123334455778888
Q ss_pred CCEEEEEEcCCeE
Q 009597 425 TNWLAAQSLDNQI 437 (531)
Q Consensus 425 ~~~l~s~s~Dg~I 437 (531)
+.++++. ++.|
T Consensus 193 G~l~~v~--~g~~ 203 (236)
T 1tl2_A 193 GTLFGVQ--GGKF 203 (236)
T ss_dssp SCEEEEE--TTEE
T ss_pred CcEEEEe--CCeE
Confidence 8877766 6643
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.06 E-value=1.9 Score=50.04 Aligned_cols=211 Identities=11% Similarity=0.154 Sum_probs=115.2
Q ss_pred CCeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCE
Q 009597 305 DKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRR 384 (531)
Q Consensus 305 Dg~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~ 384 (531)
..+|.|-|+..+..+.+.... .-...++|.. ++++.- ...++.|||+.+...+..+.-. ..|.-=.|.....
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~--AdsAIMnP~~---~iiALr-ag~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~- 118 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPIS--ADSAIMNPAS---KVIALK-AGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT- 118 (1630)
T ss_pred CceEEEEECCCCCCccccccc--chhhccCCCc---ceEEEe-cCCeEEEeehHHhhhhcccccC-CCceEEEecCCCe-
Confidence 347888888776544222111 1122334432 344444 4789999999988877776644 4566666765443
Q ss_pred EEEEeCCCCEEEEEcCCCeEEEEeeCCC----CCCccEEEEeCCCCEEEEEE-------cCCeEEEEEcCCcceeceeee
Q 009597 385 FVTSSDDKSLRVWEFGIPVVIKYISEPH----MHSMPSISLHPNTNWLAAQS-------LDNQILIYSTRERFQLNKKKR 453 (531)
Q Consensus 385 l~s~s~Dg~I~iwd~~~~~~~~~~~~~~----~~~v~~v~~sp~~~~l~s~s-------~Dg~I~iwd~~~~~~~~~~~~ 453 (531)
|+..+ +..|..|++........+...| ...|..-..+++.+|++..+ ..|.+.+|+...+. .+.
T Consensus 119 l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~----sQ~ 193 (1630)
T 1xi4_A 119 VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQP 193 (1630)
T ss_pred eEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc----chh
Confidence 33333 4569999996533222222222 45677777888999988655 34889999887542 234
Q ss_pred ecCCccccceEEEEE--cCC-CCEEEEEe---CCCcEEEEECCCC---eE------EEEeec---cCCcEEEEEEecCCC
Q 009597 454 FAGHIVAGYACQVNF--SPD-GRFVMSGD---GEGKCWFWDWKSC---KV------FRTLKC---HEGVCIGCEWHPLEQ 515 (531)
Q Consensus 454 ~~~~~~~~~v~~l~~--spd-g~~l~sgs---~dg~I~iwd~~~~---~~------~~~~~~---h~~~V~~v~~~p~~~ 515 (531)
+.||... ...+.. .+. ...++.+. ..++++|-++... .. +..+-. -.+-..++..++ ..
T Consensus 194 iegha~~--F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~-k~ 270 (1630)
T 1xi4_A 194 IEGHAAS--FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KH 270 (1630)
T ss_pred hhHhHhh--hheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecc-cc
Confidence 5555321 111111 111 12222221 1368888887542 11 111111 122334666666 45
Q ss_pred CEEEEEeCCCCEEeeC
Q 009597 516 SKVATCGWDGLIKYWD 531 (531)
Q Consensus 516 ~~l~t~s~Dg~I~iWD 531 (531)
.++...+.-|.|.++|
T Consensus 271 g~iy~itk~G~~~~~d 286 (1630)
T 1xi4_A 271 DVVFLITKYGYIHLYD 286 (1630)
T ss_pred CEEEEEecCceEEEEe
Confidence 5666677778888776
No 345
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.69 E-value=9.7 Score=38.75 Aligned_cols=107 Identities=12% Similarity=0.082 Sum_probs=59.5
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEE--EEccC-------CCcceEEEEccCCCCCcEEEEeeC------
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVI--RTFST-------GKIPYVVKLNPDDDKQNILLAGMS------ 348 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i--~~~~~-------~~~~~~~~~~~~~~~~~~l~sg~~------ 348 (531)
-...++|+|.|+|+++++-...+.|++++..++... ..+.. .....-+.++++-.....|.+...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 345689999999986665544357998887655542 23321 112234666664222233443332
Q ss_pred -------CCeEEEEECCCC-------ceeE-EEcc-cCCCeeEEEEecCCCEEEEEeC
Q 009597 349 -------DKKIVQWDMNTK-------EITQ-EYDQ-HLGAVNTITFVDSNRRFVTSSD 390 (531)
Q Consensus 349 -------dg~I~iwd~~t~-------~~~~-~~~~-h~~~I~~l~~sp~~~~l~s~s~ 390 (531)
...|.-|++... +.+. .+.. .......|+|.|+|.++++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666655322 1111 1221 1224688999999998887664
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.58 E-value=18 Score=37.69 Aligned_cols=92 Identities=9% Similarity=0.064 Sum_probs=60.8
Q ss_pred CCCccEEEEeCCCCEEEEEE-cCCeEEEEEcCCccee------ceeee-ecCCccccceEEEEEcCCCCEEEEEeCCCcE
Q 009597 413 MHSMPSISLHPNTNWLAAQS-LDNQILIYSTRERFQL------NKKKR-FAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 484 (531)
Q Consensus 413 ~~~v~~v~~sp~~~~l~s~s-~Dg~I~iwd~~~~~~~------~~~~~-~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I 484 (531)
..+...+.++|+|+++++++ .+.++.++|+.....+ ..... .......-.....+|.++|....+-.-|..|
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceE
Confidence 34566889999999988766 5679999998742111 00000 1111123346679999999666666689999
Q ss_pred EEEECCCC----------eEEEEeeccCCc
Q 009597 485 WFWDWKSC----------KVFRTLKCHEGV 504 (531)
Q Consensus 485 ~iwd~~~~----------~~~~~~~~h~~~ 504 (531)
.-|++... ..+..+..|-.+
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~Yqp 431 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQP 431 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCE
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCC
Confidence 99998653 567777766654
No 347
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.43 E-value=4.1 Score=38.57 Aligned_cols=217 Identities=12% Similarity=0.034 Sum_probs=102.3
Q ss_pred ceEEEEEccCCCEEEEEecCCeEEEEeCCC-CcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCCceeE
Q 009597 286 AVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 364 (531)
Q Consensus 286 ~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t-~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~~~~~ 364 (531)
.|..|+...... ++. . ||.|..|-... +++-....... .+..+..-. .+.++. . ||.|+.|-....-.+-
T Consensus 25 ~i~~ia~G~~h~-~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~--~i~~ia~G~--~hs~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 25 GVDAIAGGYFHG-LAL-K-GGKVLGWGANLNGQLTMPAATQS--GVDAIAAGN--YHSLAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SCCEEEECSSEE-EEE-E-TTEEEEEECCSSSTTSCCGGGGS--CCCEEEECS--SEEEEE-E-TTEEEEEECCTTSTTC
T ss_pred CCcEEEeCCCeE-EEE-E-CCEEEEEeCCCCCCCCCCccCCC--CEEEEEeCC--CEEEEE-E-CCEEEEeeCCCCCCCC
Confidence 577777654332 222 4 89999996543 22110111111 122222211 133444 4 8999999765421111
Q ss_pred EEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCC
Q 009597 365 EYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 444 (531)
Q Consensus 365 ~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~ 444 (531)
.-..-...|..|+.... ..+.-. ||.|..|-....-.+- +.......|..++... ...++-. ||.|..|-...
T Consensus 96 ~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~--~~~~~l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGV--YTALAVK-NGGVIAWGDNY 168 (282)
T ss_dssp CCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECS--SEEEEEE-TTEEEEEECCT
T ss_pred CCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC-CCccCCCCeEEEEccc--CEEEEEE-CCEEEEecCCC
Confidence 11111246777776543 333334 8999999764321110 1111233455555432 2333334 89999997655
Q ss_pred cceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEEEEecCCCCEEEEEeCC
Q 009597 445 RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 524 (531)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~D 524 (531)
..++...... ...+..++.... +.+.- .+|.|+.|-....-.+..-......|..++.-. ...++. . |
T Consensus 169 ~gqlg~p~~~-----~~~v~~i~~G~~--hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~--~h~~al-~-~ 236 (282)
T 3qhy_B 169 FGQTTVPAEA-----QSGVDDVAGGIF--HSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGE--WYSLAL-K-N 236 (282)
T ss_dssp TSTTSCCGGG-----GSSEEEEEECSS--EEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECS--SCEEEE-E-T
T ss_pred CCCCCCceec-----CCCeEEEEecCC--EEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCC--CEEEEE-E-C
Confidence 3333211111 233555554433 33333 589999997553211111111123455665543 223333 3 8
Q ss_pred CCEEee
Q 009597 525 GLIKYW 530 (531)
Q Consensus 525 g~I~iW 530 (531)
|.|..|
T Consensus 237 g~v~~w 242 (282)
T 3qhy_B 237 GKVIAW 242 (282)
T ss_dssp TEEEEE
T ss_pred CEEEEe
Confidence 888887
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.46 E-value=7.2 Score=39.87 Aligned_cols=111 Identities=13% Similarity=0.128 Sum_probs=61.1
Q ss_pred CCCeeEEEEecCCC-EEEEEeCCCCEEEEEcCCCe---EEEEeeC--------CCCCCccEEEEeCC----CCEEEEEEc
Q 009597 370 LGAVNTITFVDSNR-RFVTSSDDKSLRVWEFGIPV---VIKYISE--------PHMHSMPSISLHPN----TNWLAAQSL 433 (531)
Q Consensus 370 ~~~I~~l~~sp~~~-~l~s~s~Dg~I~iwd~~~~~---~~~~~~~--------~~~~~v~~v~~sp~----~~~l~s~s~ 433 (531)
...-+.|+|.|++. +|+++...|.|++++..... .+..+.. .....+..|+|+|+ +.+.++-+.
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 35567899999996 56666788999999754221 1222211 01345778999996 444444332
Q ss_pred C------------CeEEEEEcCCc--c-----eeceeeeecCCccccceEEEEEcCCCCEEEEEeC
Q 009597 434 D------------NQILIYSTRER--F-----QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 480 (531)
Q Consensus 434 D------------g~I~iwd~~~~--~-----~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~ 480 (531)
+ ..|.-|.+... . ....+..+...........|.|.|||.+.++.+.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 14555665421 0 0111111111111233567999999987776554
No 349
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=85.68 E-value=29 Score=34.24 Aligned_cols=172 Identities=8% Similarity=0.111 Sum_probs=94.5
Q ss_pred eEEEEeCCCC--cEEEEccCCCc-----c--eEEEEc-cC----CCCCcEEEEeeCCCeEEEEECCCCceeEEEccc---
Q 009597 307 NIKYWDTETG--QVIRTFSTGKI-----P--YVVKLN-PD----DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQH--- 369 (531)
Q Consensus 307 ~I~vWd~~t~--~~i~~~~~~~~-----~--~~~~~~-~~----~~~~~~l~sg~~dg~I~iwd~~t~~~~~~~~~h--- 369 (531)
.|.+||+.++ +.++++..... . ..+.+. .. .......++=...+-|.++|+.+++..+.+..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6889999999 88888765322 1 223333 11 112233444445789999999988765544210
Q ss_pred ---------------CCCeeEEEEecC----CCEEEEEeCCCCEEEEEcC-----C---CeEEEEeeCC-CCCCccEEEE
Q 009597 370 ---------------LGAVNTITFVDS----NRRFVTSSDDKSLRVWEFG-----I---PVVIKYISEP-HMHSMPSISL 421 (531)
Q Consensus 370 ---------------~~~I~~l~~sp~----~~~l~s~s~Dg~I~iwd~~-----~---~~~~~~~~~~-~~~~v~~v~~ 421 (531)
...|..|+++|+ ++.|.-....+ -++|.+. . ...++.+... ....-..+++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 136778888887 66666555444 2333321 1 1122222211 1122334566
Q ss_pred e-CCCCEEEEEEcCCeEEEEEcCC-cceeceeeeecCCccccceEEEEEcCCCCEEEEEe
Q 009597 422 H-PNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD 479 (531)
Q Consensus 422 s-p~~~~l~s~s~Dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs 479 (531)
. .+|.++++--..+.|..|+... .........+.....-.++..+.+..+|.+.+..+
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 5 5787777777888999999876 32111112211111234566677777776555443
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=85.24 E-value=26 Score=33.28 Aligned_cols=123 Identities=11% Similarity=0.006 Sum_probs=69.0
Q ss_pred CeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEe--CCC--CEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCC
Q 009597 350 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSS--DDK--SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNT 425 (531)
Q Consensus 350 g~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s--~Dg--~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~ 425 (531)
..|+..++...+...... .. +..|++++++|+-.. .++ .|...++..... ..+.. +. + ..++|++
T Consensus 88 ~~Iy~i~~dg~~~~~l~~---~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~-~~--~--~~~~~~g 156 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDP---DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKN-HY--L--FTCNTSD 156 (302)
T ss_dssp EEEEEEETTSCCCEEEEC---SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EEEES-SC--C--CCSEEET
T ss_pred CeEEEEeCCCCcceEeec---CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EEEeC-CC--c--eEeeEEC
Confidence 478888887765433322 11 236777888887765 333 455556654332 23322 11 1 3467788
Q ss_pred CEEEEEEc-CCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCC--CcEEEEECCCC
Q 009597 426 NWLAAQSL-DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE--GKCWFWDWKSC 492 (531)
Q Consensus 426 ~~l~s~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d--g~I~iwd~~~~ 492 (531)
+.|.-.+. ..+|.+.++...... ..+.+. .. ..++|++.+|+-.... ..|..-++...
T Consensus 157 ~~iy~t~~g~~~Iy~~~l~g~~~~---~l~~~~-----~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 157 RYFYYNNPKNGQLYRYDTASQSEA---LFYDCN-----CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp TEEEEECTTTCCEEEEETTTTEEE---EEECSC-----EE-EEEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred CEEEEEeCCCceEEEEECCCCCEE---EEeCCC-----cc-ceeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence 88876655 567888887665322 112222 11 2356888888766543 35666665543
No 351
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=83.11 E-value=37 Score=33.27 Aligned_cols=69 Identities=12% Similarity=0.043 Sum_probs=34.5
Q ss_pred CCeeEEEEecC-CCEEEEEeCCCCEEEEEcCCCeEEEEeeCC----C--------CCCccEEEEeCC-CCEEEEEEcCCe
Q 009597 371 GAVNTITFVDS-NRRFVTSSDDKSLRVWEFGIPVVIKYISEP----H--------MHSMPSISLHPN-TNWLAAQSLDNQ 436 (531)
Q Consensus 371 ~~I~~l~~sp~-~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~----~--------~~~v~~v~~sp~-~~~l~s~s~Dg~ 436 (531)
..|.+|.+.|. ...++.+..++.|...+ ..+.....+... . ...+.++.++|. ...|.++...+
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g- 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG- 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-
Confidence 35788999873 34444444444343332 112222222110 0 124788899885 46666666544
Q ss_pred EEEEE
Q 009597 437 ILIYS 441 (531)
Q Consensus 437 I~iwd 441 (531)
|...+
T Consensus 255 l~~s~ 259 (394)
T 3b7f_A 255 IYRMD 259 (394)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 44443
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=79.45 E-value=49 Score=32.33 Aligned_cols=181 Identities=8% Similarity=-0.037 Sum_probs=86.1
Q ss_pred CcEEEEeeCCCeEEEEECCC-CceeEEE--cccCCCeeEEEEec--CCCEEEEEeCCC----CEEEEEcCCCeEEEEeeC
Q 009597 340 QNILLAGMSDKKIVQWDMNT-KEITQEY--DQHLGAVNTITFVD--SNRRFVTSSDDK----SLRVWEFGIPVVIKYISE 410 (531)
Q Consensus 340 ~~~l~sg~~dg~I~iwd~~t-~~~~~~~--~~h~~~I~~l~~sp--~~~~l~s~s~Dg----~I~iwd~~~~~~~~~~~~ 410 (531)
...|.+|+..| +.+++... +.....+ ......|.+|++.| .+..++ ++..+ .|...+ ..+.....+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s~-D~G~tW~~~~~ 98 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLM-AARTGHLGPTVFRSD-DGGGNWTEATR 98 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEE-EEEC--CCEEEEEES-STTSCCEECSB
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEE-EecCCCCCccEEEeC-CCCCCceECCc
Confidence 34677777777 55554332 2222222 12335799999998 454444 44444 343332 22222222211
Q ss_pred C-------------CCCCccEEEEeC-C-CCEEEEEEcCCeEEEEEcCCcceeceeeeecC--------------Ccccc
Q 009597 411 P-------------HMHSMPSISLHP-N-TNWLAAQSLDNQILIYSTRERFQLNKKKRFAG--------------HIVAG 461 (531)
Q Consensus 411 ~-------------~~~~v~~v~~sp-~-~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~--------------~~~~~ 461 (531)
. ....|.++++.| + ...|.+++..+.|...+- .+.....+..... .....
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~ 177 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGP 177 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCC
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCC
Confidence 1 112466788887 2 556666666666555432 2222111111100 01123
Q ss_pred ceEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeEEEEeec-----c--------CCcEEEEEEecCCCCEEEEEeCCC
Q 009597 462 YACQVNFSPD-GRFVMSGDGEGKCWFWDWKSCKVFRTLKC-----H--------EGVCIGCEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 462 ~v~~l~~spd-g~~l~sgs~dg~I~iwd~~~~~~~~~~~~-----h--------~~~V~~v~~~p~~~~~l~t~s~Dg 525 (531)
.+.+|.++|. ...|+.+..++.|+..+ ..++....+.. + ...+.+++++|.+...|+.+...|
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 4667888873 34455554444454443 22222222210 0 124788999985556666666554
No 353
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=79.36 E-value=46 Score=32.01 Aligned_cols=185 Identities=6% Similarity=-0.036 Sum_probs=97.0
Q ss_pred CcEEEEeeCCCeEEEEECCCC-------ceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcC--CC-------e
Q 009597 340 QNILLAGMSDKKIVQWDMNTK-------EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFG--IP-------V 403 (531)
Q Consensus 340 ~~~l~sg~~dg~I~iwd~~t~-------~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~--~~-------~ 403 (531)
...++..+.+|.|+...+... .....+.. .+.+..+........++..+..|.+..+... .- .
T Consensus 109 e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~ 187 (327)
T 3uc1_A 109 APYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATS 187 (327)
T ss_dssp SSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSB
T ss_pred CCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCC
Confidence 468999999999999876432 11222333 3456666666666788888889988887766 21 1
Q ss_pred EEEEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceece----eeeecCCccccceEEEEEcCCCCEEEEEe
Q 009597 404 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK----KKRFAGHIVAGYACQVNFSPDGRFVMSGD 479 (531)
Q Consensus 404 ~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~----~~~~~~~~~~~~v~~l~~spdg~~l~sgs 479 (531)
-+..+.......|.++...+.+.+|+..+..|.++.-.+.......+ ...+.-......+..+....+...|+..+
T Consensus 188 Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T 267 (327)
T 3uc1_A 188 GVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVT 267 (327)
T ss_dssp CEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEE
T ss_pred CeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEc
Confidence 11122222345566666666677899999999999887654221111 11111111012233343334455666677
Q ss_pred CCCcEEEEECCCCe-------EEEEeec-cCCcEEEEEEecCCCCEEEEEeCCC
Q 009597 480 GEGKCWFWDWKSCK-------VFRTLKC-HEGVCIGCEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 480 ~dg~I~iwd~~~~~-------~~~~~~~-h~~~V~~v~~~p~~~~~l~t~s~Dg 525 (531)
.+|.+..++...-+ =+..+.. ....|.++...+.+...+.+.+.+|
T Consensus 268 ~~G~~ir~~~~~i~~~gR~a~GV~~i~l~~~d~vv~~~~~~~~~~~~~~~~~~g 321 (327)
T 3uc1_A 268 SGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNAEESGDDNAVDANG 321 (327)
T ss_dssp GGGCEEEEEGGGSCBCCTTSCCEECTTCCTTCCEEEEEECC-------------
T ss_pred CCCeEEEEehhhccccCCCCCCeEeEecCCCCEEEEEEEcCCCcceEEEEecCC
Confidence 77777777653211 1222221 2346777776664445566666554
No 354
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=77.05 E-value=48 Score=30.96 Aligned_cols=207 Identities=10% Similarity=0.009 Sum_probs=111.4
Q ss_pred EEecCc---cCceEEEEEccCCCEEEEEecCCeEEEEe---CCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCe
Q 009597 278 RTYMGH---SKAVRDISFCNDGTKFLTASYDKNIKYWD---TETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 351 (531)
Q Consensus 278 ~~l~gH---~~~V~~l~fspdg~~l~s~s~Dg~I~vWd---~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 351 (531)
+..+|| .+.+..+.-.....+|+.-+..|.++--. +..+.....+..+. .++.+.+.......++..+.+|.
T Consensus 14 r~~~g~~~~gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~~~e--~i~~v~~~~~~~~~~v~~T~~G~ 91 (276)
T 3no0_A 14 IPVEELPLEKAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKSREE--KIVGAFIREKFGNRLLLATKKGY 91 (276)
T ss_dssp EEGGGCCSSCCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSSTTC--CEEEEEEGGGSCSEEEEEETTSE
T ss_pred eeccCCCCCCCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCCCCC--EEEEEECCcCCCCEEEEEeCCCE
Confidence 344455 23566666555555677777778766543 22221111032222 23222221103368999999999
Q ss_pred EEEEECCCCc------eeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCC-------CeEEEEeeCCCCCCccE
Q 009597 352 IVQWDMNTKE------ITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI-------PVVIKYISEPHMHSMPS 418 (531)
Q Consensus 352 I~iwd~~t~~------~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~-------~~~~~~~~~~~~~~v~~ 418 (531)
|+...+..-. ....+. ..+.+..+........++..+..|.+..+.... ..-+..+.......|..
T Consensus 92 iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~ 170 (276)
T 3no0_A 92 VKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSG 170 (276)
T ss_dssp EEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEE
T ss_pred EEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEE
Confidence 9998875421 111222 234555555555666888889999888877522 11112222223455666
Q ss_pred EEEeCCCCEEEEEEcCCeEEEEEcCCcceece----eeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEE--EECC
Q 009597 419 ISLHPNTNWLAAQSLDNQILIYSTRERFQLNK----KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF--WDWK 490 (531)
Q Consensus 419 v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~----~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~i--wd~~ 490 (531)
+...+++..++..+..|.++...+..-....+ ...+ .....+..+....+...++..+.+|.+.. ++..
T Consensus 171 ~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i---~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 171 LRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS---GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC---CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE---cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 66556677889999999999888754221111 1111 11222333333333445666777777776 7643
No 355
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=77.00 E-value=58 Score=31.90 Aligned_cols=226 Identities=10% Similarity=0.052 Sum_probs=0.0
Q ss_pred CEEEEEecCCeEEEE-----------eCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCCC-----
Q 009597 297 TKFLTASYDKNIKYW-----------DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK----- 360 (531)
Q Consensus 297 ~~l~s~s~Dg~I~vW-----------d~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t~----- 360 (531)
..++.-..||+|..| +.........+.......++.+.. .....++-..+|.|+.|-....
T Consensus 11 ~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~---G~~~~~~l~~~G~v~~wG~n~~GqLG~ 87 (389)
T 3kci_A 11 RENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGKLYATGYGAGGRLGI 87 (389)
T ss_dssp ----------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEE---ETTEEEEEETTSCEEEEECCGGGTTSS
T ss_pred ccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEe---CCCeEEEEcCCCcEEEEECCCCCCCCC
Q ss_pred -------ceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEE-----------EcCCCeEEEEeeCCCCCCccEEEEe
Q 009597 361 -------EITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVW-----------EFGIPVVIKYISEPHMHSMPSISLH 422 (531)
Q Consensus 361 -------~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iw-----------d~~~~~~~~~~~~~~~~~v~~v~~s 422 (531)
.+...-......+..++++......+.-..||.|..| +.........+.......|..++..
T Consensus 88 g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G 167 (389)
T 3kci_A 88 GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG 167 (389)
T ss_dssp SSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC
Q ss_pred CCCCEEEEEEcCCeEEEEEcCCccee-------ceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCC----
Q 009597 423 PNTNWLAAQSLDNQILIYSTRERFQL-------NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS---- 491 (531)
Q Consensus 423 p~~~~l~s~s~Dg~I~iwd~~~~~~~-------~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~---- 491 (531)
....++...+|.|..|-....-++ ..............+..++......+.++-..+|.|+.|-...
T Consensus 168 --~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqL 245 (389)
T 3kci_A 168 --GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 245 (389)
T ss_dssp --SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTT
T ss_pred --cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCC
Q ss_pred --------CeEEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCEEee
Q 009597 492 --------CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 492 --------~~~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
..+...-......|..++. +....+.-..||.|..|
T Consensus 246 G~g~~~~~~~p~~v~~~~~~~v~~v~~---G~~hs~alt~~G~v~~w 289 (389)
T 3kci_A 246 GRGGSDGCKVPMKIDSLTGLGVVKVEC---GSQFSVALTKSGAVYTW 289 (389)
T ss_dssp SSSSCCCEEEEEECGGGTTSCEEEEEE---ETTEEEEEETTSCEEEE
T ss_pred CCCCCCCccccEEecccCCCcEEEEeC---CCCEEEEEeCCCeEEEE
No 356
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=73.24 E-value=63 Score=30.53 Aligned_cols=176 Identities=6% Similarity=0.019 Sum_probs=97.7
Q ss_pred EEEccCCCEEEEEecC--------------CeEEEEeCCCCcEEEEccCCCcceEEEEccCCCCCcEEEEe---eCCCeE
Q 009597 290 ISFCNDGTKFLTASYD--------------KNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAG---MSDKKI 352 (531)
Q Consensus 290 l~fspdg~~l~s~s~D--------------g~I~vWd~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg---~~dg~I 352 (531)
--++++|.+|+-+... ..|+..++..++..... ... ...+.+.. ..+..+- .....|
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~-~~~---~~~~s~~g--~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD-PDP---CIYASLIG--NYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE-CSC---EEEEEEET--TEEEEEEESSSSCEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee-cCC---ccEEEEeC--CEEEEEeecCCCCceE
Confidence 3467888888766543 46777787766533222 111 12344432 2344443 345567
Q ss_pred EEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeC-CCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEE
Q 009597 353 VQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSD-DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQ 431 (531)
Q Consensus 353 ~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~ 431 (531)
...++.... ...+..+.. ..++++++.|+-.+. ...|.+-++........+ . ... ...++|++.+|+-.
T Consensus 132 y~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~-~---~~~-~~~~~P~g~~iy~t 201 (302)
T 3s25_A 132 YRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY-D---CNC-YKPVVLDDTNVYYM 201 (302)
T ss_dssp EEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE-C---SCE-EEEEEEETTEEEEE
T ss_pred EEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe-C---CCc-cceeeecCCEEEEE
Confidence 777776444 334433322 456778888776665 567888888776544332 2 112 23466888888877
Q ss_pred EcCC--eEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEe--CCCcEEEEECCC
Q 009597 432 SLDN--QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD--GEGKCWFWDWKS 491 (531)
Q Consensus 432 s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs--~dg~I~iwd~~~ 491 (531)
...+ .|..-++...... .+... .+ ..|+|++.+|+-++ ..+.|..-++..
T Consensus 202 ~~~~~~~I~~~~ldG~~~~----~Lt~~----~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 202 DVNRDNAIVHVNINNPNPV----VLTEA----NI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EGGGTTEEEEECSSSCCCE----ECSCS----CE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred EcCCCcEEEEEECCCCCeE----EEeCC----Cc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 6543 5666666553221 12111 12 34788888887653 235666666653
No 357
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=72.75 E-value=50 Score=30.87 Aligned_cols=163 Identities=10% Similarity=0.040 Sum_probs=79.4
Q ss_pred CCeEEEEECCCCceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEE
Q 009597 349 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 428 (531)
Q Consensus 349 dg~I~iwd~~t~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l 428 (531)
||.|+.|-....-.+-.-......|..|+...... ++. . ||.|..|-....-.+- +...-...|..++... ...
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg-~P~~~~~~v~~ia~G~--~hs 114 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTT-VPAEARSGVDAIAAGA--WAS 114 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTC-CCGGGSSSEEEEEEET--TEE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCC-CCcccCCCeEEEECcC--CEE
Confidence 89999997654221111111234567777654332 333 4 8999999754321110 0111123566665543 344
Q ss_pred EEEEcCCeEEEEEcCCcceeceeeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeeccCCcEEEE
Q 009597 429 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 508 (531)
Q Consensus 429 ~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~v 508 (531)
++-. +|.|..|-.....++.... .....+..++.... +.+.-. +|.|+.|-....-.+..-..-...|..+
T Consensus 115 ~al~-~G~v~~wG~n~~gqlg~~~-----~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i 185 (282)
T 3qhy_B 115 YALK-DGKVIAWGDDSDGQTTVPA-----EAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDV 185 (282)
T ss_dssp EEEE-TTEEEEEECCTTSTTSCCG-----GGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEE
T ss_pred EEEe-CCeEEEecCCCCCcCCCCc-----cCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEE
Confidence 4445 9999999765533332111 11223555554433 333334 7899999755321111111112346666
Q ss_pred EEecCCCCEEEEEeCCCCEEee
Q 009597 509 EWHPLEQSKVATCGWDGLIKYW 530 (531)
Q Consensus 509 ~~~p~~~~~l~t~s~Dg~I~iW 530 (531)
+.-. ...++. .||.|..|
T Consensus 186 ~~G~--~hs~al--~~G~v~~w 203 (282)
T 3qhy_B 186 AGGI--FHSLAL--KDGKVIAW 203 (282)
T ss_dssp EECS--SEEEEE--ETTEEEEE
T ss_pred EecC--CEEEEE--ECCeEEEE
Confidence 5543 222333 47777776
No 358
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=71.74 E-value=58 Score=33.03 Aligned_cols=109 Identities=11% Similarity=0.014 Sum_probs=59.5
Q ss_pred CCccEEEEeCCCC-EEEEEEcCCeEEEEEcCCcceeceeeeecCCc-------cccceEEEEEcCC----CCEEEEEeC-
Q 009597 414 HSMPSISLHPNTN-WLAAQSLDNQILIYSTRERFQLNKKKRFAGHI-------VAGYACQVNFSPD----GRFVMSGDG- 480 (531)
Q Consensus 414 ~~v~~v~~sp~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~-------~~~~v~~l~~spd----g~~l~sgs~- 480 (531)
.....|+|.|++. .|+++...|.|++++.........+..+.... ...-...|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3456889999985 45566789999999754321111111111100 1234677999996 444443332
Q ss_pred -C----------CcEEEEECCC----------CeEEEEee----ccCCcEEEEEEecCCCCEEEEEeCCC
Q 009597 481 -E----------GKCWFWDWKS----------CKVFRTLK----CHEGVCIGCEWHPLEQSKVATCGWDG 525 (531)
Q Consensus 481 -d----------g~I~iwd~~~----------~~~~~~~~----~h~~~V~~v~~~p~~~~~l~t~s~Dg 525 (531)
+ ..|.-|.+.. .+.+..+. .|. -..++|.| ++.+.++.|..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgp-DG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGP-DGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECT-TSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECC-CCcEEEEeCCCC
Confidence 1 1344455431 23444433 243 47899999 667777766543
No 359
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=69.87 E-value=88 Score=30.77 Aligned_cols=169 Identities=8% Similarity=-0.033 Sum_probs=94.7
Q ss_pred CeEEEEECCCC--ceeEEEccc------CCCeeEEEEe---cC----CCEEEEE-eCCCCEEEEEcCCCeEEEEeeC---
Q 009597 350 KKIVQWDMNTK--EITQEYDQH------LGAVNTITFV---DS----NRRFVTS-SDDKSLRVWEFGIPVVIKYISE--- 410 (531)
Q Consensus 350 g~I~iwd~~t~--~~~~~~~~h------~~~I~~l~~s---p~----~~~l~s~-s~Dg~I~iwd~~~~~~~~~~~~--- 410 (531)
-+|.+||+.+. ++++.+... ...+..+.+. |. +.+...+ +...-|.|+|+.+++..+....
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 36888999998 888887542 3457888887 22 2333333 3466799999999877665521
Q ss_pred CC--------------CCCccEEEEeCC----CCEEEEEEcCCeEEEEEcCC-----cceeceeeeecCCcc-ccceEEE
Q 009597 411 PH--------------MHSMPSISLHPN----TNWLAAQSLDNQILIYSTRE-----RFQLNKKKRFAGHIV-AGYACQV 466 (531)
Q Consensus 411 ~~--------------~~~v~~v~~sp~----~~~l~s~s~Dg~I~iwd~~~-----~~~~~~~~~~~~~~~-~~~v~~l 466 (531)
+. ...+..++++|+ +++|.-....+. ++|.+.+ ......++.+ |... ......+
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~ 280 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIAL 280 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEe-eecCCCCCcceE
Confidence 11 135667888887 677777666552 3333322 1111111111 1110 1223336
Q ss_pred EEc-CCCCEEEEEeCCCcEEEEECCC-C---eEEEEeec--cCCcEEEEEEecCCCCEEEEE
Q 009597 467 NFS-PDGRFVMSGDGEGKCWFWDWKS-C---KVFRTLKC--HEGVCIGCEWHPLEQSKVATC 521 (531)
Q Consensus 467 ~~s-pdg~~l~sgs~dg~I~iwd~~~-~---~~~~~~~~--h~~~V~~v~~~p~~~~~l~t~ 521 (531)
++. .+|.++++--....|..|+..+ . ..+..+.. .-..+.++.+.+ ++.+.+++
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~-~g~Lwv~s 341 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS-KGGLWFMS 341 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT-TSCEEEEE
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECC-CCeEEEEE
Confidence 675 5777777777888999999875 1 11222221 112456777665 44444443
No 360
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.35 E-value=1.5e+02 Score=32.98 Aligned_cols=38 Identities=11% Similarity=-0.004 Sum_probs=32.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009597 462 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499 (531)
Q Consensus 462 ~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~ 499 (531)
.+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 45667788889999999999999999999999887753
No 361
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=68.02 E-value=83 Score=29.79 Aligned_cols=230 Identities=7% Similarity=0.022 Sum_probs=115.6
Q ss_pred cCCCEEEEEecCCeEEEEeCCCCcEEE-------EccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEEC---CC----
Q 009597 294 NDGTKFLTASYDKNIKYWDTETGQVIR-------TFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM---NT---- 359 (531)
Q Consensus 294 pdg~~l~s~s~Dg~I~vWd~~t~~~i~-------~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~---~t---- 359 (531)
|+...+++.+.+|.|+--.+....... .+..........+..... ...++..+..|.++-+.. ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~-~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANT-HDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEET-TCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECC-CCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 345678889999999887765432211 111112222211111111 234666677787666544 22
Q ss_pred --CceeE---EEcccCCCeeEEEEe---cCCCEEEEEeCCCCEEEEEcCCC-----eEEEEeeCCCCCCccEEEEeCCCC
Q 009597 360 --KEITQ---EYDQHLGAVNTITFV---DSNRRFVTSSDDKSLRVWEFGIP-----VVIKYISEPHMHSMPSISLHPNTN 426 (531)
Q Consensus 360 --~~~~~---~~~~h~~~I~~l~~s---p~~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~~~~~~~~v~~v~~sp~~~ 426 (531)
|..+. .+. ....|.++... .++.+++..+..|.++...+... .-+..+.......+..+.......
T Consensus 80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGED 158 (307)
T ss_dssp SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTC
T ss_pred CCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCC
Confidence 22111 122 23456555443 35668999999999998876321 111111111224555555555566
Q ss_pred EEEEEEcCCeEEEEEcCCcceece----eeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCC-------C--e
Q 009597 427 WLAAQSLDNQILIYSTRERFQLNK----KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS-------C--K 493 (531)
Q Consensus 427 ~l~s~s~Dg~I~iwd~~~~~~~~~----~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~-------~--~ 493 (531)
.++..+.+|.+..+....-....+ .+.+.- .....+..+....++..|++.+..|.++-.++.. + .
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L-~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~ 237 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRL-GEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGV 237 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC-CTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCE
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEe-CCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCE
Confidence 788889999998888754211110 011111 1123455555555566788889999988876631 1 1
Q ss_pred EEEEeeccCCcEEEEEEecCCCCEEEEEeCCCCE
Q 009597 494 VFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLI 527 (531)
Q Consensus 494 ~~~~~~~h~~~V~~v~~~p~~~~~l~t~s~Dg~I 527 (531)
....+..-.+.+..+.... +..-++..+.+|.+
T Consensus 238 ~~~~~~~~~~~lv~~~~v~-~~~~l~~~t~~g~~ 270 (307)
T 1zi0_A 238 ISIKVTERNGLVVGAVQVD-DCDQIMMITDAGTL 270 (307)
T ss_dssp ESSCCCTTTCSEEEEEEEC-TTCEEEEEESSCCE
T ss_pred EeeEecCCCCeEEEEEEeC-CCceEEEEcCCCcE
Confidence 1222222234555554443 23334445556654
No 362
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=65.29 E-value=32 Score=38.60 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=33.8
Q ss_pred ceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEcc
Q 009597 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS 323 (531)
Q Consensus 286 ~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~ 323 (531)
.|.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 57778888888899999999999999999999998764
No 363
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=62.57 E-value=1.2e+02 Score=29.65 Aligned_cols=151 Identities=11% Similarity=0.025 Sum_probs=83.4
Q ss_pred EccCCCEEEEEecCCeEEEEeCCC-------CcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEEC---CC--
Q 009597 292 FCNDGTKFLTASYDKNIKYWDTET-------GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM---NT-- 359 (531)
Q Consensus 292 fspdg~~l~s~s~Dg~I~vWd~~t-------~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~---~t-- 359 (531)
+-|+..++++.+.+|.|+--.+.. +.-+..+.......+..+...... ..++..+..|.++-+.. ..
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~-d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTH-DTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTT-CEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCC-CEEEEEeCCCeEEEEEHHHCcCCC
Confidence 346777899999999999765421 111222222222222222222222 44666667777766543 21
Q ss_pred ----CceeE---EEcccCCCeeEEEEec---CCCEEEEEeCCCCEEEEEcCCC-----eEEEEeeCCCCCCccEEEEeCC
Q 009597 360 ----KEITQ---EYDQHLGAVNTITFVD---SNRRFVTSSDDKSLRVWEFGIP-----VVIKYISEPHMHSMPSISLHPN 424 (531)
Q Consensus 360 ----~~~~~---~~~~h~~~I~~l~~sp---~~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~~~~~~~~v~~v~~sp~ 424 (531)
|..+. .+. ....|.++.... .+.+|+.++..|.++...+... .-+..+.......+..+.....
T Consensus 82 r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~ 160 (370)
T 3l6v_A 82 SNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDG 160 (370)
T ss_dssp TTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECS
T ss_pred cccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCC
Confidence 22111 122 234566555443 4568999999999998876321 1111121112344555555555
Q ss_pred CCEEEEEEcCCeEEEEEcCC
Q 009597 425 TNWLAAQSLDNQILIYSTRE 444 (531)
Q Consensus 425 ~~~l~s~s~Dg~I~iwd~~~ 444 (531)
...|+..+..|.+..|....
T Consensus 161 ~~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp CCEEEEEETTSEEEEEEGGG
T ss_pred CceEEEEeCCCeEEEEEccc
Confidence 66788889999998888654
No 364
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=62.46 E-value=1.1e+02 Score=29.08 Aligned_cols=194 Identities=8% Similarity=-0.002 Sum_probs=106.3
Q ss_pred cCCCEEEEEecCCeEEEEeCCCCc-------EEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECCC---C---
Q 009597 294 NDGTKFLTASYDKNIKYWDTETGQ-------VIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT---K--- 360 (531)
Q Consensus 294 pdg~~l~s~s~Dg~I~vWd~~t~~-------~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~t---~--- 360 (531)
++..++++.+.+|.|+--.+..-. -+..+..........+..... ...++..+..|.++-+.... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~-~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNT-HDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEET-TCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECC-CCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 456678899999999988664322 122222222222222222111 23577777888877766531 1
Q ss_pred ---ce---eEEEcccCCCeeEEEEec---CCCEEEEEeCCCCEEEEEcCCC-----eEEEEeeCCCCCCccEEEEeCCCC
Q 009597 361 ---EI---TQEYDQHLGAVNTITFVD---SNRRFVTSSDDKSLRVWEFGIP-----VVIKYISEPHMHSMPSISLHPNTN 426 (531)
Q Consensus 361 ---~~---~~~~~~h~~~I~~l~~sp---~~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~~~~~~~~v~~v~~sp~~~ 426 (531)
.. ...+. ....|.++...+ +..+|+..+..|.++...+... .-+..+.......+..+.......
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 11 00122 123455554443 4678889999999998876322 111122222345566665555567
Q ss_pred EEEEEEcCCeEEEEEcCCcceece----eeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 009597 427 WLAAQSLDNQILIYSTRERFQLNK----KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 490 (531)
Q Consensus 427 ~l~s~s~Dg~I~iwd~~~~~~~~~----~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~ 490 (531)
.++..+.+|.+..+....-....+ .+.+.-. ....+..+....++..|++.+..|.+....+.
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 788999999999998764211111 1111111 12335555555566778888999998888764
No 365
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=59.97 E-value=1.9e+02 Score=31.07 Aligned_cols=230 Identities=10% Similarity=0.096 Sum_probs=115.3
Q ss_pred eEEEE-EccCCCEEEEE-ecC----CeEEEEeCCCCcEEE-Ecc-CCCc-------ceEEEEccCCCCCcEEEEe-----
Q 009597 287 VRDIS-FCNDGTKFLTA-SYD----KNIKYWDTETGQVIR-TFS-TGKI-------PYVVKLNPDDDKQNILLAG----- 346 (531)
Q Consensus 287 V~~l~-fspdg~~l~s~-s~D----g~I~vWd~~t~~~i~-~~~-~~~~-------~~~~~~~~~~~~~~~l~sg----- 346 (531)
...+. ++|++++++.+ |.. ..|+++|+.+++.+. .|. ..+. -..+.|.. ...++++.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d---~~~~~~~~~~~~~ 207 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWIN---KDTIIFNLVLHKN 207 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEE---TTEEEECCCCSTT
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEEC---CCEEEEEeCCCCC
Confidence 34444 88898876643 333 369999999998763 222 1111 02223431 11233321
Q ss_pred -----eCCCeEEEEECCCCc--eeEEEcccCCCe-eEEEEecCCC-----EEEEEeCC---CCEEEEEcCCC-eEEEEee
Q 009597 347 -----MSDKKIVQWDMNTKE--ITQEYDQHLGAV-NTITFVDSNR-----RFVTSSDD---KSLRVWEFGIP-VVIKYIS 409 (531)
Q Consensus 347 -----~~dg~I~iwd~~t~~--~~~~~~~h~~~I-~~l~~sp~~~-----~l~s~s~D---g~I~iwd~~~~-~~~~~~~ 409 (531)
+....|+.|.+-+.. -...|......+ .....+++++ .+++.+.+ ..+.+.|...+ ..+..+.
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 287 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKIN 287 (711)
T ss_dssp CBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECC
T ss_pred CcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEee
Confidence 123578888886642 233444333333 2344455655 35554433 34556665532 1223333
Q ss_pred CCCCCCccEEEEeCCCCEEEEE----------EcCCeEEEEEcCCcce----eceeeeecCCccccceEEEEEcCCCCEE
Q 009597 410 EPHMHSMPSISLHPNTNWLAAQ----------SLDNQILIYSTRERFQ----LNKKKRFAGHIVAGYACQVNFSPDGRFV 475 (531)
Q Consensus 410 ~~~~~~v~~v~~sp~~~~l~s~----------s~Dg~I~iwd~~~~~~----~~~~~~~~~~~~~~~v~~l~~spdg~~l 475 (531)
.+... .+..+..+.+++.. ...+.|.+.++.+... ......+..+.....+..+.+..+ .++
T Consensus 288 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 288 MPSDA---TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp SCTTC---EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred cCCcc---eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 32222 22334455554422 2467788898876421 111222222222345777888876 566
Q ss_pred EEEeCCCc--EEEEECCCCe-EEEE-eecc-CCcEEEEEEecCCCCEEEEEeC
Q 009597 476 MSGDGEGK--CWFWDWKSCK-VFRT-LKCH-EGVCIGCEWHPLEQSKVATCGW 523 (531)
Q Consensus 476 ~sgs~dg~--I~iwd~~~~~-~~~~-~~~h-~~~V~~v~~~p~~~~~l~t~s~ 523 (531)
++...++. |+++|+.+++ .... +... .+.+..+...+.+..++++.+.
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss 416 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIEN 416 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEEC
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEec
Confidence 67766764 6777776664 2233 3222 2456666666655556666554
No 366
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=55.30 E-value=1.4e+02 Score=28.17 Aligned_cols=150 Identities=5% Similarity=-0.059 Sum_probs=82.8
Q ss_pred CcEEEEeeCCCeEEEEECCC-------CceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCC-------CeEE
Q 009597 340 QNILLAGMSDKKIVQWDMNT-------KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI-------PVVI 405 (531)
Q Consensus 340 ~~~l~sg~~dg~I~iwd~~t-------~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~-------~~~~ 405 (531)
...++..+..|.++...+.. +.....+..+ +.+..+........++..+.+|.+..+.... ..-+
T Consensus 109 ~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv 187 (307)
T 1zi0_A 109 GVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGV 187 (307)
T ss_dssp TCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCe
Confidence 35688899999999987632 1122223333 5666666665666788888899888877632 1112
Q ss_pred EEeeCCCCCCccEEEEeCCCCEEEEEEcCCeEEEEEcCCcceece----eeeecCCccccceEEEEEcCCCCEEEEEeCC
Q 009597 406 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK----KKRFAGHIVAGYACQVNFSPDGRFVMSGDGE 481 (531)
Q Consensus 406 ~~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~I~iwd~~~~~~~~~----~~~~~~~~~~~~v~~l~~spdg~~l~sgs~d 481 (531)
.-+.......|.++....++..|++.+..|.++..++.......+ ...+.-....+.+..+....+..-|+..+.+
T Consensus 188 ~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~ 267 (307)
T 1zi0_A 188 RGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDA 267 (307)
T ss_dssp ECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESS
T ss_pred EeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCC
Confidence 222222345566665555566788889999988887643211101 0111111111233333333334455566667
Q ss_pred CcEEEEECC
Q 009597 482 GKCWFWDWK 490 (531)
Q Consensus 482 g~I~iwd~~ 490 (531)
|.+.-+...
T Consensus 268 g~~ir~~~~ 276 (307)
T 1zi0_A 268 GTLVRTRVS 276 (307)
T ss_dssp CCEEEEEGG
T ss_pred CcEEEEecc
Confidence 766665554
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=51.77 E-value=61 Score=34.81 Aligned_cols=38 Identities=13% Similarity=0.312 Sum_probs=31.7
Q ss_pred CceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEccC
Q 009597 285 KAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST 324 (531)
Q Consensus 285 ~~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~~ 324 (531)
..|.++.+ +..++++-+.|.++|+|++.+++++.+...
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 45666665 467999999999999999999999888765
No 368
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=50.55 E-value=11 Score=43.36 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=32.5
Q ss_pred ceEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEcc
Q 009597 286 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS 323 (531)
Q Consensus 286 ~V~~l~fspdg~~l~s~s~Dg~I~vWd~~t~~~i~~~~ 323 (531)
.|.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566667788899999999999999999999998865
No 369
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=49.27 E-value=57 Score=37.33 Aligned_cols=37 Identities=11% Similarity=0.012 Sum_probs=31.0
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009597 463 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 499 (531)
Q Consensus 463 v~~l~~spdg~~l~sgs~dg~I~iwd~~~~~~~~~~~ 499 (531)
+.+++..++..+|++-+.|+++|||++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3345667788999999999999999999999987753
No 370
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=49.03 E-value=39 Score=35.54 Aligned_cols=59 Identities=14% Similarity=0.245 Sum_probs=44.0
Q ss_pred eeEEEEecCCCEEEEEeCC------------CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEE
Q 009597 373 VNTITFVDSNRRFVTSSDD------------KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQ 431 (531)
Q Consensus 373 I~~l~~sp~~~~l~s~s~D------------g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~ 431 (531)
.-.|+|+|.|++++....+ ..+.+.+..+++....+..+....++.++|+|+++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3568999999977765432 2355566677777777777778889999999999887764
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=47.32 E-value=1.8e+02 Score=26.98 Aligned_cols=157 Identities=6% Similarity=0.020 Sum_probs=90.3
Q ss_pred cCceEEEEEcc-CCCEEEEEecCCeEEEEeCCCCc----EEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEECC
Q 009597 284 SKAVRDISFCN-DGTKFLTASYDKNIKYWDTETGQ----VIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN 358 (531)
Q Consensus 284 ~~~V~~l~fsp-dg~~l~s~s~Dg~I~vWd~~t~~----~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~~ 358 (531)
...|..+.... +..+++.++.+|.|+...+..-. -+..+........+....... ...++..+..|.+..+...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~-~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVD-ETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCS-SCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCC-CCEEEEEECCCEEEEEEhh
Confidence 34555554321 46789999999999999875432 122222222223333322222 2467788888998888752
Q ss_pred C---------CceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCC-------CeEEEEeeCCCCCCccEEEEe
Q 009597 359 T---------KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI-------PVVIKYISEPHMHSMPSISLH 422 (531)
Q Consensus 359 t---------~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~-------~~~~~~~~~~~~~~v~~v~~s 422 (531)
. |.....+. ....|..+...+++..++..+..|.++...+.. +.-+..+ . ....+..+...
T Consensus 146 eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~-~~~~lv~~~~~ 222 (276)
T 3no0_A 146 EVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-G-TKDTLVDLIPI 222 (276)
T ss_dssp GSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-C-SSSCEEEEEEE
T ss_pred hCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-c-CCCcEEEEEEe
Confidence 1 11111222 235666666666777899999999999887632 2222222 1 23344444333
Q ss_pred CCCCEEEEEEcCCeEEE--EEcCC
Q 009597 423 PNTNWLAAQSLDNQILI--YSTRE 444 (531)
Q Consensus 423 p~~~~l~s~s~Dg~I~i--wd~~~ 444 (531)
.....++..+.+|.+.. ++...
T Consensus 223 ~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 223 KEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp SSEEEEEEEETTSCEEEEEEEGGG
T ss_pred CCCCEEEEEcCCCeEEEeeeCHHH
Confidence 34456777788888777 77654
No 372
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=42.95 E-value=2.2e+02 Score=26.84 Aligned_cols=158 Identities=10% Similarity=0.027 Sum_probs=88.9
Q ss_pred ceEEEEEccCCCEEEEEecCCeEEEEeCC---CC------cE---EEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEE
Q 009597 286 AVRDISFCNDGTKFLTASYDKNIKYWDTE---TG------QV---IRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 353 (531)
Q Consensus 286 ~V~~l~fspdg~~l~s~s~Dg~I~vWd~~---t~------~~---i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~ 353 (531)
.+..+........++..+..|.++-.... .. .. ...+..+.....+...........++..+..|.++
T Consensus 48 ~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~k 127 (312)
T 1suu_A 48 EIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIA 127 (312)
T ss_dssp CEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEE
T ss_pred EEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEE
Confidence 34444444445567777778877666542 11 11 00122222222221111111235678889999999
Q ss_pred EEECCC-------CceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCC-------CeEEEEeeCCCCCCccEE
Q 009597 354 QWDMNT-------KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI-------PVVIKYISEPHMHSMPSI 419 (531)
Q Consensus 354 iwd~~t-------~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~-------~~~~~~~~~~~~~~v~~v 419 (531)
...+.. +.....+.. .+.+..+........++..+.+|.+..+.... ..-+..+.......|.++
T Consensus 128 r~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~ 206 (312)
T 1suu_A 128 RFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKV 206 (312)
T ss_dssp EEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEE
T ss_pred EEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEE
Confidence 887732 222222333 45666666666667888999999988887643 112222222234455666
Q ss_pred EEeCCCCEEEEEEcCCeEEEEEcCC
Q 009597 420 SLHPNTNWLAAQSLDNQILIYSTRE 444 (531)
Q Consensus 420 ~~sp~~~~l~s~s~Dg~I~iwd~~~ 444 (531)
....++..+++.+..|......+..
T Consensus 207 ~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 207 LSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEECCCCeEEEEECCCceEEEEHHH
Confidence 5555567788889999999988754
No 373
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=42.69 E-value=3.6e+02 Score=29.18 Aligned_cols=147 Identities=7% Similarity=0.042 Sum_probs=70.4
Q ss_pred cCceEEEEEccC-CCEEEEEecCCeEEEEeCCCCcEEEEccCC--------CcceEEEEccCCCCCcEEEEeeCCCe---
Q 009597 284 SKAVRDISFCND-GTKFLTASYDKNIKYWDTETGQVIRTFSTG--------KIPYVVKLNPDDDKQNILLAGMSDKK--- 351 (531)
Q Consensus 284 ~~~V~~l~fspd-g~~l~s~s~Dg~I~vWd~~t~~~i~~~~~~--------~~~~~~~~~~~~~~~~~l~sg~~dg~--- 351 (531)
...|.+|+++|. ...++.++..+.|...+ ..|+.-..+... .....+.+.+..+ ..++++.....
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~--~~i~~~~g~~~~~~ 90 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNP--DRLYLAQGRYVGDE 90 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEE--EEEEEEECSCTTSS
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCC--CEEEEEeCccCCCc
Confidence 458999999995 45567777667665554 334433333221 1234444444322 34444432211
Q ss_pred -EEEE-ECCCCceeEEEccc-------C--CCeeEEEEecCC-CEEEEEeCCCCEEEEEcCCCeEEEEeeC-----CCCC
Q 009597 352 -IVQW-DMNTKEITQEYDQH-------L--GAVNTITFVDSN-RRFVTSSDDKSLRVWEFGIPVVIKYISE-----PHMH 414 (531)
Q Consensus 352 -I~iw-d~~t~~~~~~~~~h-------~--~~I~~l~~sp~~-~~l~s~s~Dg~I~iwd~~~~~~~~~~~~-----~~~~ 414 (531)
-.|| ....++.-..+... . ..+..|+++|.. ..++.+...+.|.. ....++.-..+.. ....
T Consensus 91 ~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 91 WAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGI 169 (789)
T ss_dssp CCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTT
T ss_pred ccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCC
Confidence 2233 33344433333211 1 135678888743 45555553443321 2222222222221 1124
Q ss_pred CccEEEEeC-CCCEEEEEEcC
Q 009597 415 SMPSISLHP-NTNWLAAQSLD 434 (531)
Q Consensus 415 ~v~~v~~sp-~~~~l~s~s~D 434 (531)
.+..+.++| ++..++++..+
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESS
T ss_pred CeEEEEECCCCCCEEEEEEcC
Confidence 577888888 44566666655
No 374
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=39.32 E-value=91 Score=32.55 Aligned_cols=62 Identities=13% Similarity=0.232 Sum_probs=43.7
Q ss_pred CCeeEEEEecCCCEEEEEeCC------------CCEEEEEcCCCeEEEEeeCCCCCCccEEEEeCCCCEEEEEE
Q 009597 371 GAVNTITFVDSNRRFVTSSDD------------KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 432 (531)
Q Consensus 371 ~~I~~l~~sp~~~~l~s~s~D------------g~I~iwd~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s 432 (531)
.....|.|.++|.+.++.... ..|..++..+++....+..+....++.++|+|+++.|++.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 345679999999877744321 14666666667666555545567789999999999887754
No 375
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=38.54 E-value=97 Score=32.50 Aligned_cols=57 Identities=18% Similarity=0.235 Sum_probs=40.4
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCeEEEEeeccC-CcEEEEEEecCCCCEEEE
Q 009597 463 ACQVNFSPDGRFVMSGDGE------------GKCWFWDWKSCKVFRTLKCHE-GVCIGCEWHPLEQSKVAT 520 (531)
Q Consensus 463 v~~l~~spdg~~l~sgs~d------------g~I~iwd~~~~~~~~~~~~h~-~~V~~v~~~p~~~~~l~t 520 (531)
.-.|+|+|.|.++++-+.+ ..+.+.+..++++.+.+.++. ..++.++|+| +++.|+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp-Dg~tlfv 547 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFV 547 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC-CCCEEEE
Confidence 3458999999987776543 246666777888777776654 4799999999 4554444
No 376
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=37.95 E-value=4e+02 Score=28.44 Aligned_cols=225 Identities=10% Similarity=0.051 Sum_probs=111.6
Q ss_pred CCCCCceeeeeecccCeeeE-EecC-ccC------ceEEEEEccCCCEEEEE----------ecCCeEEEEeCCCCc--E
Q 009597 259 GGEKGEHVEDKSTFHGKCMR-TYMG-HSK------AVRDISFCNDGTKFLTA----------SYDKNIKYWDTETGQ--V 318 (531)
Q Consensus 259 ~~~~~~~i~~~~~~~~~~~~-~l~g-H~~------~V~~l~fspdg~~l~s~----------s~Dg~I~vWd~~t~~--~ 318 (531)
+|++...+++++..+++.+. .|.. -+. ....++|..+...+++. ++...|+.|.+-+.. -
T Consensus 151 ~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~ 230 (711)
T 4hvt_A 151 GGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKA 230 (711)
T ss_dssp TTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGC
T ss_pred CCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHC
Confidence 56666788889888887763 1220 000 11344776444444432 123578999876542 2
Q ss_pred EEEccCCCcceEEEEccCCCCCc----EEEEee---CCCeEEEEECCC--CceeEEEcccCCCeeEEEEecCCCEEEEE-
Q 009597 319 IRTFSTGKIPYVVKLNPDDDKQN----ILLAGM---SDKKIVQWDMNT--KEITQEYDQHLGAVNTITFVDSNRRFVTS- 388 (531)
Q Consensus 319 i~~~~~~~~~~~~~~~~~~~~~~----~l~sg~---~dg~I~iwd~~t--~~~~~~~~~h~~~I~~l~~sp~~~~l~s~- 388 (531)
...+........+......+.+. ++++.+ ....+.+.+... ++ +..+..... ..+..+..+.+++..
T Consensus 231 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~--~~~~~~~~~~~~~~~~ 307 (711)
T 4hvt_A 231 KKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSD--ATLQGSFKEYVFWLLR 307 (711)
T ss_dssp EEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTT--CEEEEEETTEEEEECS
T ss_pred eEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCc--ceEeeeECCEEEEEEC
Confidence 23333322222222222222222 344433 224566667653 33 223322222 123344556555533
Q ss_pred ---------eCCCCEEEEEcCCCe-------EEE-EeeCCCCCCccEEEEeCCCCEEEEEEcCCe--EEEEEcCCcc-ee
Q 009597 389 ---------SDDKSLRVWEFGIPV-------VIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQ--ILIYSTRERF-QL 448 (531)
Q Consensus 389 ---------s~Dg~I~iwd~~~~~-------~~~-~~~~~~~~~v~~v~~sp~~~~l~s~s~Dg~--I~iwd~~~~~-~~ 448 (531)
...+.|.+.|+..+. ... .+.......+..+.+..+ .++++...++. |.++++.++. ..
T Consensus 308 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~ 386 (711)
T 4hvt_A 308 SDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTK 386 (711)
T ss_dssp SCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECC
T ss_pred cccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEE
Confidence 246678899987631 122 233334456778888865 56777777774 5666665442 11
Q ss_pred ceeeeecCCccccceEEEEEcCCCC-EEEEEe---CCCcEEEEECC
Q 009597 449 NKKKRFAGHIVAGYACQVNFSPDGR-FVMSGD---GEGKCWFWDWK 490 (531)
Q Consensus 449 ~~~~~~~~~~~~~~v~~l~~spdg~-~l~sgs---~dg~I~iwd~~ 490 (531)
.....+.. .+.+..+.+++++. ++++.+ .-+.++.+|+.
T Consensus 387 ~~~i~lp~---~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 387 PVVLKLPY---QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp CEEECCCS---TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EeccCCCC---CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 11011221 12344455666654 444433 23568888876
No 377
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=35.62 E-value=4.3e+02 Score=28.14 Aligned_cols=27 Identities=15% Similarity=0.175 Sum_probs=19.0
Q ss_pred ceEEEEEccC-CCEEEEEecCCeEEEEe
Q 009597 286 AVRDISFCND-GTKFLTASYDKNIKYWD 312 (531)
Q Consensus 286 ~V~~l~fspd-g~~l~s~s~Dg~I~vWd 312 (531)
.|..|+++|. ...++.+...+.|..++
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~ 51 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD 51 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC
Confidence 7999999996 34566666566665554
No 378
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=31.09 E-value=5.1e+02 Score=27.58 Aligned_cols=61 Identities=13% Similarity=0.172 Sum_probs=36.5
Q ss_pred CCeeEEEEecCC-CEEEEEeCCCCEEEEEcCCCeEEEEeeCC-C-----CCCccEEEEeC-CCCEEEEEE
Q 009597 371 GAVNTITFVDSN-RRFVTSSDDKSLRVWEFGIPVVIKYISEP-H-----MHSMPSISLHP-NTNWLAAQS 432 (531)
Q Consensus 371 ~~I~~l~~sp~~-~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~-~-----~~~v~~v~~sp-~~~~l~s~s 432 (531)
+.|..|+++|.. ..++++...+.|..++-. +..-..+... . ...|.+|+++| +.+.++++.
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~-G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPS-TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETT-TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCC-CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 379999999863 456667666666666533 3333333221 1 24588999998 444555544
No 379
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=29.44 E-value=82 Score=33.85 Aligned_cols=31 Identities=13% Similarity=0.246 Sum_probs=26.9
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeEEEEeec
Q 009597 470 PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 500 (531)
Q Consensus 470 pdg~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 500 (531)
.+..+|++-+.|.++|+|++++++++.+..-
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3478999999999999999999998877653
No 380
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=28.88 E-value=3.8e+02 Score=25.36 Aligned_cols=103 Identities=7% Similarity=0.027 Sum_probs=64.7
Q ss_pred cEEEEeeCCCeEEEEECCC------CceeE--EEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCC-------CeEE
Q 009597 341 NILLAGMSDKKIVQWDMNT------KEITQ--EYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGI-------PVVI 405 (531)
Q Consensus 341 ~~l~sg~~dg~I~iwd~~t------~~~~~--~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~-------~~~~ 405 (531)
..++..+..|.++...+.. +.-+. .+... +.+..+........++..+.+|.+..+.... ..-+
T Consensus 107 ~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV 185 (323)
T 1wp5_A 107 GYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGV 185 (323)
T ss_dssp CEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCE
T ss_pred ceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCE
Confidence 5688889999999987732 11122 22322 5566666666666788888899888887632 1122
Q ss_pred EEeeCCCCCCccEEEEeCCCC-EEEEEEcCCeEEEEEcCC
Q 009597 406 KYISEPHMHSMPSISLHPNTN-WLAAQSLDNQILIYSTRE 444 (531)
Q Consensus 406 ~~~~~~~~~~v~~v~~sp~~~-~l~s~s~Dg~I~iwd~~~ 444 (531)
+.+.......|.++...+.+. .|++.+..|..+..++..
T Consensus 186 ~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 186 KGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp ECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 223222344566665544445 788889999988887754
No 381
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=25.41 E-value=2.9e+02 Score=28.75 Aligned_cols=59 Identities=15% Similarity=0.179 Sum_probs=40.1
Q ss_pred eEEEEEcCCCCEEEEEeC------------CCcEEEEECCCCeEEEEeecc-CCcEEEEEEecCCCCEEEEE
Q 009597 463 ACQVNFSPDGRFVMSGDG------------EGKCWFWDWKSCKVFRTLKCH-EGVCIGCEWHPLEQSKVATC 521 (531)
Q Consensus 463 v~~l~~spdg~~l~sgs~------------dg~I~iwd~~~~~~~~~~~~h-~~~V~~v~~~p~~~~~l~t~ 521 (531)
...|.|+++|.+.++.+. ...|+.++..++++...+.+. ...++.++|+|++..++++.
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 566999999988875432 125777777778876666543 34689999999544444443
No 382
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=24.48 E-value=4.5e+02 Score=24.79 Aligned_cols=194 Identities=10% Similarity=0.045 Sum_probs=101.2
Q ss_pred cCCCEEEEEecCCeEEEEeCCCCcE--EEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEEC---CC------Cce
Q 009597 294 NDGTKFLTASYDKNIKYWDTETGQV--IRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM---NT------KEI 362 (531)
Q Consensus 294 pdg~~l~s~s~Dg~I~vWd~~t~~~--i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd~---~t------~~~ 362 (531)
|+...+++.+.+|.|+--.+...+. ...+..........+..... ...++..+..|.++-+.. .. |.+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t-~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNT-KDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEET-TSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECC-CCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 5566788899999998775431100 00111111112211111111 234666677787666554 21 221
Q ss_pred eE---EEcccCCCeeEEEEecC---CCEEEEEeCCCCEEEEEcCC------CeEEEEeeCCCCCCccEEEEeCCCCEEEE
Q 009597 363 TQ---EYDQHLGAVNTITFVDS---NRRFVTSSDDKSLRVWEFGI------PVVIKYISEPHMHSMPSISLHPNTNWLAA 430 (531)
Q Consensus 363 ~~---~~~~h~~~I~~l~~sp~---~~~l~s~s~Dg~I~iwd~~~------~~~~~~~~~~~~~~v~~v~~sp~~~~l~s 430 (531)
+. .+. ....|.++...++ +.+++.++..|.++...+.. ..-+..+.......+..+........|+.
T Consensus 82 i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l 160 (323)
T 1wp5_A 82 IANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFL 160 (323)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEE
T ss_pred hhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEE
Confidence 11 111 2234555544443 66899999999999987632 11122222222355555555555667888
Q ss_pred EEcCCeEEEEEcCCcceece----eeeecCCccccceEEEEEcCCCC-EEEEEeCCCcEEEEECC
Q 009597 431 QSLDNQILIYSTRERFQLNK----KKRFAGHIVAGYACQVNFSPDGR-FVMSGDGEGKCWFWDWK 490 (531)
Q Consensus 431 ~s~Dg~I~iwd~~~~~~~~~----~~~~~~~~~~~~v~~l~~spdg~-~l~sgs~dg~I~iwd~~ 490 (531)
.+.+|.+..+....-....+ .+...-. ....+..+...+++. .|++.+..|..+..++.
T Consensus 161 ~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 161 VTHNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp EETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EeCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 99999999998754211111 1111111 123344454434444 78888888887777653
No 383
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=24.04 E-value=5e+02 Score=25.12 Aligned_cols=205 Identities=9% Similarity=0.026 Sum_probs=101.9
Q ss_pred cCceEEEEEccCCCEEEEEecCCeEEEEe---CC------CCcEEEE-ccCCCcceEEEEccC--CCCCcEEEEeeCCCe
Q 009597 284 SKAVRDISFCNDGTKFLTASYDKNIKYWD---TE------TGQVIRT-FSTGKIPYVVKLNPD--DDKQNILLAGMSDKK 351 (531)
Q Consensus 284 ~~~V~~l~fspdg~~l~s~s~Dg~I~vWd---~~------t~~~i~~-~~~~~~~~~~~~~~~--~~~~~~l~sg~~dg~ 351 (531)
...+..+........|+..+..|.++-+. +. .|..+.. +.......++.+.+. ......|+.++..|.
T Consensus 45 ~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 124 (370)
T 3l6v_A 45 EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGT 124 (370)
T ss_dssp CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCe
Confidence 34455555554555566666677766554 32 1222211 111222223322221 123358999999999
Q ss_pred EEEEECCC-------CceeEEEcccCCCeeEEEEecCCCEEEEEeCCCCEEEEEcCCC-------eEEEEeeCCCCCCcc
Q 009597 352 IVQWDMNT-------KEITQEYDQHLGAVNTITFVDSNRRFVTSSDDKSLRVWEFGIP-------VVIKYISEPHMHSMP 417 (531)
Q Consensus 352 I~iwd~~t-------~~~~~~~~~h~~~I~~l~~sp~~~~l~s~s~Dg~I~iwd~~~~-------~~~~~~~~~~~~~v~ 417 (531)
++...+.. +.....+.. .+.+..+........++..+..|.+..+....- .-++-+.......|.
T Consensus 125 vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv 203 (370)
T 3l6v_A 125 VKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVV 203 (370)
T ss_dssp EEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEE
T ss_pred EEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEE
Confidence 99887632 222222332 345555666566667888888888887775321 112222222234444
Q ss_pred EEEEeC-----------------------------------CCCEEEEEEcCCeEEEEEcCCcceece----eeeecCCc
Q 009597 418 SISLHP-----------------------------------NTNWLAAQSLDNQILIYSTRERFQLNK----KKRFAGHI 458 (531)
Q Consensus 418 ~v~~sp-----------------------------------~~~~l~s~s~Dg~I~iwd~~~~~~~~~----~~~~~~~~ 458 (531)
++...+ .+..+++.+..|..+...+.......+ +..+.-..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~ 283 (370)
T 3l6v_A 204 SLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTE 283 (370)
T ss_dssp EEEEECCC-----------------------------------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCT
T ss_pred EEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecC
Confidence 444443 456788999999998888754221110 11111111
Q ss_pred cccceEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 009597 459 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 489 (531)
Q Consensus 459 ~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~ 489 (531)
..+.+..+.+..+..-|+..+..|.+.-..+
T Consensus 284 ~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v 314 (370)
T 3l6v_A 284 RNGKLVRAVLLGSTDEVMLISDGGTLVRTRG 314 (370)
T ss_dssp TTCSEEEEEEECTTCEEEEEETTCCEEEEEG
T ss_pred CCCcEEEEEEeCCCceEEEEcCCCeEEEeeH
Confidence 1223333333334445555666666555543
No 384
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=22.93 E-value=4.9e+02 Score=24.62 Aligned_cols=228 Identities=10% Similarity=0.048 Sum_probs=115.7
Q ss_pred CEEEEEecCCeEEEEeCCC-------CcEEEEccCCCcceEEEEccCCCCCcEEEEeeCCCeEEEEE---CCC------C
Q 009597 297 TKFLTASYDKNIKYWDTET-------GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD---MNT------K 360 (531)
Q Consensus 297 ~~l~s~s~Dg~I~vWd~~t-------~~~i~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~I~iwd---~~t------~ 360 (531)
..+++.+.+|.|+--.+.+ +.-+..+..........+...... ..++.-+..|.++... +.. |
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~-d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTH-DLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETT-SEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCC-CEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 4677788888888665322 111222222222222222111112 3455556667665543 332 2
Q ss_pred ceeEEE-c-ccCCCeeEEEEec---CCCEEEEEeCCCCEEEEEcCCCe-----EEEEeeCCCCCCccEEEEeCCCCEEEE
Q 009597 361 EITQEY-D-QHLGAVNTITFVD---SNRRFVTSSDDKSLRVWEFGIPV-----VIKYISEPHMHSMPSISLHPNTNWLAA 430 (531)
Q Consensus 361 ~~~~~~-~-~h~~~I~~l~~sp---~~~~l~s~s~Dg~I~iwd~~~~~-----~~~~~~~~~~~~v~~v~~sp~~~~l~s 430 (531)
..+..+ . .....|.++...+ +..+++..+.+|.|+.-.+.... -+..+.......+..+........|+.
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill 162 (327)
T 3uc1_A 83 QHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLL 162 (327)
T ss_dssp EEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEE
T ss_pred EEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEE
Confidence 221111 1 1234566555444 57899999999999988764321 111122122445555555556678888
Q ss_pred EEcCCeEEEEEcC--Ccceece----eeeecCCccccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC-------eEEEE
Q 009597 431 QSLDNQILIYSTR--ERFQLNK----KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSC-------KVFRT 497 (531)
Q Consensus 431 ~s~Dg~I~iwd~~--~~~~~~~----~~~~~~~~~~~~v~~l~~spdg~~l~sgs~dg~I~iwd~~~~-------~~~~~ 497 (531)
.+..|.+..+... .-....+ ...+.- .....|..+...+++.+|+..+..|.++.-.+... +-+..
T Consensus 163 ~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L-~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~ 241 (327)
T 3uc1_A 163 VSANGQSIRFSATDEALRPMGRATSGVQGMRF-NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLT 241 (327)
T ss_dssp EETTSEEEEEECCTTTSCCCCTTSBCEESSCC-CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEES
T ss_pred EECCCeEEEEECcccccCcCCcCCCCeeeecC-CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEE
Confidence 9999999888876 3111100 010110 11234555655566778899999999888765321 22222
Q ss_pred ee--ccCCcEEEEEEecCCCCEEEEEeCCCCE
Q 009597 498 LK--CHEGVCIGCEWHPLEQSKVATCGWDGLI 527 (531)
Q Consensus 498 ~~--~h~~~V~~v~~~p~~~~~l~t~s~Dg~I 527 (531)
++ .-.+.+..+.... +...++..+.+|.+
T Consensus 242 ~~l~~~~d~lv~~~~~~-~~~~i~l~T~~G~~ 272 (327)
T 3uc1_A 242 VMYDRRRGRLVGALIVD-DDSELYAVTSGGGV 272 (327)
T ss_dssp SCCCTTTCSEEEEEEEC-TTCEEEEEEGGGCE
T ss_pred EEecCCCCeEEEEEEeC-CCccEEEEcCCCeE
Confidence 32 2133455554444 34445555556654
Done!