Query 009598
Match_columns 531
No_of_seqs 320 out of 1979
Neff 6.7
Searched_HMMs 46136
Date Thu Mar 28 15:03:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009598.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009598hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02854 3-ketoacyl-CoA syntha 100.0 7E-121 1E-125 981.0 46.8 519 6-531 1-521 (521)
2 PLN02192 3-ketoacyl-CoA syntha 100.0 1E-120 3E-125 976.8 39.4 500 20-530 8-507 (511)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 2E-116 5E-121 945.8 44.6 497 20-528 4-500 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 6E-109 1E-113 883.9 40.2 471 47-529 1-477 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 4E-100 8E-105 807.4 36.8 427 102-528 38-465 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 1.1E-77 2.3E-82 599.8 24.2 290 116-405 1-290 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 1.1E-55 2.4E-60 451.9 23.9 321 122-504 2-323 (323)
8 PLN03172 chalcone synthase fam 100.0 4.1E-51 8.9E-56 432.7 30.2 347 122-504 15-387 (393)
9 cd00831 CHS_like Chalcone and 100.0 4.5E-51 9.8E-56 428.7 29.5 344 124-501 2-361 (361)
10 PLN03169 chalcone synthase fam 100.0 3.5E-50 7.5E-55 426.1 29.6 353 117-504 15-389 (391)
11 PLN03168 chalcone synthase; Pr 100.0 5.7E-50 1.2E-54 423.9 30.5 349 122-506 14-388 (389)
12 PLN03173 chalcone synthase; Pr 100.0 1.2E-49 2.5E-54 421.4 29.3 348 122-505 15-388 (391)
13 PLN03171 chalcone synthase-lik 100.0 1.9E-48 4.2E-53 413.6 31.0 350 121-506 20-397 (399)
14 PLN03170 chalcone synthase; Pr 100.0 9.4E-49 2E-53 415.9 28.1 350 122-506 19-393 (401)
15 PRK05963 3-oxoacyl-(acyl carri 100.0 9E-48 1.9E-52 397.9 30.4 322 123-503 3-326 (326)
16 PRK12880 3-oxoacyl-(acyl carri 100.0 5.4E-47 1.2E-51 396.9 29.4 336 120-507 4-342 (353)
17 COG3424 BcsA Predicted naringe 100.0 2.1E-47 4.5E-52 377.3 22.2 346 124-505 2-354 (356)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 2.4E-46 5.3E-51 395.6 31.0 332 122-503 46-379 (379)
19 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 2.4E-45 5.2E-50 380.3 29.8 321 123-503 2-325 (326)
20 PRK12879 3-oxoacyl-(acyl carri 100.0 9.4E-45 2E-49 374.6 32.1 321 122-503 3-324 (325)
21 PRK07204 3-oxoacyl-(acyl carri 100.0 8.7E-45 1.9E-49 376.1 31.6 325 122-503 3-329 (329)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 8E-45 1.7E-49 377.5 28.5 321 120-503 2-338 (338)
23 PRK06840 hypothetical protein; 100.0 2.1E-43 4.6E-48 367.3 31.4 331 121-504 2-336 (339)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 1.5E-43 3.3E-48 364.1 29.6 319 123-501 1-320 (320)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 2.8E-43 6E-48 362.8 29.8 316 123-503 2-318 (318)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 1.2E-41 2.5E-46 350.7 31.0 316 122-503 2-318 (319)
27 PRK04262 hypothetical protein; 100.0 3.4E-42 7.3E-47 359.9 25.9 310 123-508 2-313 (347)
28 PRK06816 3-oxoacyl-(acyl carri 100.0 2.8E-41 6.1E-46 356.9 31.8 347 123-504 2-378 (378)
29 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 3.3E-41 7.2E-46 352.3 25.8 314 124-518 2-318 (345)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 6.6E-40 1.4E-44 345.6 30.1 349 122-503 1-371 (372)
31 cd00827 init_cond_enzymes "ini 100.0 7.2E-39 1.6E-43 329.9 25.5 321 123-501 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 4.2E-35 9E-40 309.9 29.8 308 124-506 1-320 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 2.2E-33 4.8E-38 300.7 26.8 312 120-506 1-373 (459)
34 COG3425 PksG 3-hydroxy-3-methy 100.0 4.6E-31 9.9E-36 271.9 22.5 310 123-508 2-315 (377)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 3.1E-30 6.7E-35 276.2 26.4 316 123-506 1-376 (454)
36 PF00195 Chal_sti_synt_N: Chal 100.0 2.5E-31 5.5E-36 259.7 15.8 203 118-322 9-226 (226)
37 cd00327 cond_enzymes Condensin 100.0 1.5E-27 3.4E-32 236.8 17.6 235 198-501 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 7.3E-25 1.6E-29 226.2 14.1 251 198-501 11-332 (332)
39 PF01154 HMG_CoA_synt_N: Hydro 99.8 1.1E-18 2.3E-23 163.6 13.8 167 120-321 1-172 (174)
40 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 2.1E-19 4.6E-24 151.9 7.2 83 418-503 8-90 (90)
41 PF02797 Chal_sti_synt_C: Chal 99.8 9.4E-19 2E-23 162.1 10.5 128 350-505 17-151 (151)
42 KOG1393 Hydroxymethylglutaryl- 99.7 9.4E-16 2E-20 156.2 20.6 327 119-509 7-382 (462)
43 TIGR02845 spore_V_AD stage V s 99.7 1E-15 2.2E-20 156.1 20.3 116 198-323 50-173 (327)
44 PRK06147 3-oxoacyl-(acyl carri 99.7 1.5E-15 3.2E-20 159.3 17.9 311 122-505 3-344 (348)
45 PRK08304 stage V sporulation p 99.6 9.6E-14 2.1E-18 142.1 19.8 117 198-323 56-179 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.5 7.2E-12 1.6E-16 133.3 23.7 185 122-323 1-243 (406)
47 cd00751 thiolase Thiolase are 99.5 2.3E-12 5E-17 137.0 19.8 94 197-291 21-115 (386)
48 PF08545 ACP_syn_III: 3-Oxoacy 99.4 6.7E-13 1.4E-17 110.1 6.8 65 253-322 1-65 (80)
49 PRK09051 beta-ketothiolase; Pr 99.4 6.1E-11 1.3E-15 126.5 23.2 94 198-292 27-122 (394)
50 PRK05656 acetyl-CoA acetyltran 99.4 4E-11 8.6E-16 128.0 20.7 94 198-292 26-120 (393)
51 PRK06064 acetyl-CoA acetyltran 99.4 8.5E-11 1.8E-15 125.2 22.5 92 198-291 22-116 (389)
52 PRK08313 acetyl-CoA acetyltran 99.4 1.1E-10 2.4E-15 124.3 23.0 92 198-291 24-117 (386)
53 cd00829 SCP-x_thiolase Thiolas 99.3 1.7E-10 3.7E-15 121.9 22.5 94 197-292 15-109 (375)
54 PRK12578 acetyl-CoA acetyltran 99.3 2.4E-10 5.3E-15 121.5 23.5 93 198-292 21-114 (385)
55 PRK09052 acetyl-CoA acetyltran 99.3 2.1E-10 4.5E-15 122.7 22.0 95 197-292 30-127 (399)
56 smart00825 PKS_KS Beta-ketoacy 99.3 1.3E-10 2.9E-15 124.6 19.9 122 197-323 86-247 (424)
57 PRK12404 stage V sporulation p 99.3 1.8E-10 3.9E-15 117.7 19.2 116 198-322 54-176 (334)
58 cd00828 elong_cond_enzymes "el 99.2 4.4E-10 9.6E-15 120.0 20.5 123 197-323 71-243 (407)
59 TIGR03150 fabF beta-ketoacyl-a 99.2 1.2E-09 2.5E-14 116.6 22.2 185 122-323 1-243 (407)
60 PRK06501 3-oxoacyl-(acyl carri 99.2 4E-09 8.8E-14 113.7 25.5 182 122-323 11-257 (425)
61 cd00833 PKS polyketide synthas 99.2 3.2E-09 6.9E-14 113.5 23.5 121 197-323 86-247 (421)
62 PRK06445 acetyl-CoA acetyltran 99.2 1.2E-09 2.6E-14 116.7 19.6 91 198-291 32-126 (394)
63 PRK06025 acetyl-CoA acetyltran 99.1 2.7E-09 5.8E-14 114.2 20.1 95 197-292 28-124 (417)
64 PRK06158 thiolase; Provisional 99.1 8.3E-09 1.8E-13 109.9 22.3 87 198-289 28-115 (384)
65 TIGR01930 AcCoA-C-Actrans acet 99.1 2.9E-10 6.3E-15 121.0 11.0 95 197-292 20-115 (386)
66 PRK06690 acetyl-CoA acetyltran 99.1 5E-09 1.1E-13 110.6 20.0 91 197-292 24-114 (361)
67 PRK08256 lipid-transfer protei 99.1 9.7E-09 2.1E-13 109.6 22.2 89 198-291 22-111 (391)
68 PRK07314 3-oxoacyl-(acyl carri 99.1 2.2E-08 4.8E-13 107.2 24.1 185 122-322 2-243 (411)
69 PRK07108 acetyl-CoA acetyltran 99.1 6.8E-10 1.5E-14 118.4 11.0 94 198-292 27-122 (392)
70 PRK07103 polyketide beta-ketoa 99.0 1.2E-08 2.7E-13 109.4 20.0 121 198-323 80-251 (410)
71 PRK06205 acetyl-CoA acetyltran 99.0 7.5E-10 1.6E-14 118.6 10.3 94 198-292 26-120 (404)
72 PRK08235 acetyl-CoA acetyltran 99.0 1E-09 2.2E-14 117.2 10.9 95 197-292 25-120 (393)
73 PLN02644 acetyl-CoA C-acetyltr 99.0 2.4E-08 5.3E-13 106.7 21.4 93 198-291 25-118 (394)
74 PRK08242 acetyl-CoA acetyltran 99.0 1.6E-09 3.6E-14 115.7 11.5 95 197-292 27-123 (402)
75 PRK06059 lipid-transfer protei 99.0 2E-09 4.4E-14 115.1 10.6 93 198-292 23-117 (399)
76 PRK06333 3-oxoacyl-(acyl carri 99.0 1.5E-07 3.2E-12 101.4 24.8 120 197-323 81-256 (424)
77 PRK08722 3-oxoacyl-(acyl carri 99.0 8.2E-08 1.8E-12 103.3 22.6 121 198-323 74-246 (414)
78 PRK08439 3-oxoacyl-(acyl carri 98.9 1.1E-07 2.3E-12 102.1 22.2 119 197-322 71-243 (406)
79 PRK08170 acetyl-CoA acetyltran 98.9 4.2E-09 9.1E-14 113.6 11.1 94 198-292 27-121 (426)
80 cd00826 nondecarbox_cond_enzym 98.9 6.2E-09 1.3E-13 111.2 10.8 94 197-292 22-117 (393)
81 PRK05790 putative acyltransfer 98.9 8.6E-09 1.9E-13 110.0 11.3 95 197-292 25-120 (393)
82 PRK06954 acetyl-CoA acetyltran 98.9 9.2E-09 2E-13 110.0 10.8 94 198-292 31-125 (397)
83 PRK06065 acetyl-CoA acetyltran 98.8 1.4E-08 3E-13 108.5 11.0 91 198-290 29-121 (392)
84 PRK09116 3-oxoacyl-(acyl carri 98.8 3.4E-07 7.4E-12 98.3 21.2 188 122-322 2-244 (405)
85 PF00108 Thiolase_N: Thiolase, 98.8 1.7E-08 3.7E-13 102.2 10.5 95 197-292 25-120 (264)
86 PRK05952 3-oxoacyl-(acyl carri 98.8 8.5E-07 1.9E-11 94.4 23.0 298 122-502 2-380 (381)
87 PLN02836 3-oxoacyl-[acyl-carri 98.8 1.6E-06 3.4E-11 94.0 23.6 121 198-323 93-267 (437)
88 PRK07661 acetyl-CoA acetyltran 98.8 4.2E-08 9.1E-13 104.8 11.1 94 198-292 27-122 (391)
89 PRK09185 3-oxoacyl-(acyl carri 98.7 2.4E-06 5.1E-11 91.3 24.4 81 234-321 137-233 (392)
90 cd00832 CLF Chain-length facto 98.7 2.9E-06 6.3E-11 90.9 25.1 118 198-323 71-241 (399)
91 PLN02787 3-oxoacyl-[acyl-carri 98.7 4.2E-06 9.2E-11 92.8 26.4 117 198-322 199-372 (540)
92 PTZ00050 3-oxoacyl-acyl carrie 98.7 1E-06 2.2E-11 95.0 21.1 119 198-323 77-251 (421)
93 PRK08257 acetyl-CoA acetyltran 98.7 2.4E-06 5.2E-11 94.0 24.3 92 198-291 27-120 (498)
94 PLN02287 3-ketoacyl-CoA thiola 98.7 7.6E-08 1.6E-12 104.5 11.1 95 197-292 70-166 (452)
95 PRK07516 acetyl-CoA acetyltran 98.7 7.4E-08 1.6E-12 102.8 10.7 93 198-292 22-117 (389)
96 PRK08963 fadI 3-ketoacyl-CoA t 98.7 6.3E-08 1.4E-12 104.6 10.2 94 198-292 29-123 (428)
97 PRK13359 beta-ketoadipyl CoA t 98.7 1.1E-07 2.4E-12 101.8 11.3 95 197-292 25-122 (400)
98 PRK07851 acetyl-CoA acetyltran 98.7 9.8E-08 2.1E-12 102.4 10.9 93 198-292 27-122 (406)
99 PRK07967 3-oxoacyl-(acyl carri 98.7 6.5E-06 1.4E-10 88.5 24.6 185 122-322 2-243 (406)
100 PRK06289 acetyl-CoA acetyltran 98.7 9.7E-08 2.1E-12 102.3 10.2 91 198-292 26-122 (403)
101 PRK07910 3-oxoacyl-(acyl carri 98.6 6E-06 1.3E-10 89.1 23.7 187 122-323 12-254 (418)
102 PRK07850 acetyl-CoA acetyltran 98.6 1.6E-07 3.5E-12 100.2 11.1 94 198-292 26-121 (387)
103 PRK09050 beta-ketoadipyl CoA t 98.6 1.7E-07 3.8E-12 100.3 10.7 95 197-292 25-122 (401)
104 PRK08131 acetyl-CoA acetyltran 98.6 2.1E-07 4.6E-12 99.6 11.0 95 197-292 25-121 (401)
105 PRK06633 acetyl-CoA acetyltran 98.6 1.4E-07 2.9E-12 100.8 9.4 95 197-292 26-121 (392)
106 TIGR02430 pcaF beta-ketoadipyl 98.6 2.5E-07 5.4E-12 99.1 10.8 94 198-292 25-121 (400)
107 PRK06366 acetyl-CoA acetyltran 98.6 2.9E-07 6.2E-12 98.3 10.9 94 198-292 26-120 (388)
108 TIGR02446 FadI fatty oxidation 98.5 2.6E-07 5.6E-12 99.9 10.0 95 197-292 30-125 (430)
109 PF00109 ketoacyl-synt: Beta-k 98.5 2.1E-07 4.6E-12 92.6 8.6 121 196-321 85-251 (254)
110 PRK06504 acetyl-CoA acetyltran 98.5 4.8E-07 1E-11 96.6 10.9 95 197-292 25-121 (390)
111 PRK06157 acetyl-CoA acetyltran 98.5 5.9E-07 1.3E-11 96.2 11.0 93 198-292 27-120 (398)
112 PRK08947 fadA 3-ketoacyl-CoA t 98.5 5.4E-07 1.2E-11 96.2 10.1 94 198-292 27-123 (387)
113 PTZ00455 3-ketoacyl-CoA thiola 98.5 1E-06 2.3E-11 95.4 11.5 94 198-292 48-152 (438)
114 PRK06365 acetyl-CoA acetyltran 98.4 9.3E-07 2E-11 95.6 10.8 93 198-292 37-131 (430)
115 TIGR02445 fadA fatty oxidation 98.4 7.6E-07 1.7E-11 94.9 9.1 95 197-292 24-121 (385)
116 PRK06519 3-oxoacyl-(acyl carri 98.4 2.6E-05 5.7E-10 83.6 20.4 183 121-323 5-255 (398)
117 PRK14691 3-oxoacyl-(acyl carri 98.4 2.5E-05 5.4E-10 82.1 19.3 119 198-323 4-174 (342)
118 PRK09268 acetyl-CoA acetyltran 98.4 2.1E-06 4.5E-11 92.8 11.1 94 198-292 31-125 (427)
119 PRK07801 acetyl-CoA acetyltran 98.3 1.9E-06 4.1E-11 91.8 10.2 94 198-292 26-121 (382)
120 PF07451 SpoVAD: Stage V sporu 98.3 1.3E-05 2.8E-10 81.4 15.1 117 198-323 51-174 (329)
121 TIGR02813 omega_3_PfaA polyket 98.2 0.00016 3.5E-09 92.4 24.1 81 236-322 185-282 (2582)
122 PRK07937 lipid-transfer protei 98.2 0.00019 4.2E-09 75.7 20.4 88 199-291 25-114 (352)
123 PRK08142 acetyl-CoA acetyltran 98.1 1.1E-05 2.5E-10 86.1 9.7 88 198-290 25-112 (388)
124 PRK07855 lipid-transfer protei 97.9 4.2E-05 9.1E-10 81.7 10.1 85 198-287 24-108 (386)
125 COG0304 FabB 3-oxoacyl-(acyl-c 97.9 0.00077 1.7E-08 72.5 19.2 123 194-323 67-244 (412)
126 KOG1389 3-oxoacyl CoA thiolase 97.8 0.00039 8.4E-09 70.7 13.5 96 198-294 61-157 (435)
127 PRK06066 acetyl-CoA acetyltran 97.7 0.0002 4.4E-09 76.4 10.9 89 198-291 25-116 (385)
128 COG0183 PaaJ Acetyl-CoA acetyl 97.5 0.00041 9E-09 74.3 9.4 95 198-293 27-125 (392)
129 COG3321 Polyketide synthase mo 97.3 0.011 2.3E-07 71.1 18.7 190 122-322 4-250 (1061)
130 KOG1390 Acetyl-CoA acetyltrans 97.3 0.00068 1.5E-08 69.2 7.3 95 197-292 29-124 (396)
131 PF08540 HMG_CoA_synt_C: Hydro 96.8 0.00099 2.2E-08 68.1 4.1 62 447-508 143-206 (282)
132 KOG1406 Peroxisomal 3-ketoacyl 96.8 0.0018 4E-08 64.5 5.2 89 199-292 30-119 (408)
133 KOG1394 3-oxoacyl-(acyl-carrie 95.0 0.18 3.9E-06 52.7 10.4 119 196-322 92-268 (440)
134 KOG1391 Acetyl-CoA acetyltrans 94.8 0.058 1.3E-06 53.9 5.9 92 198-292 28-123 (396)
135 PF08541 ACP_syn_III_C: 3-Oxoa 93.9 0.046 1E-06 45.7 2.8 76 210-289 1-79 (90)
136 PRK06025 acetyl-CoA acetyltran 93.9 0.18 3.9E-06 54.5 8.0 91 203-320 318-416 (417)
137 TIGR00748 HMG_CoA_syn_Arc hydr 93.3 0.27 5.9E-06 51.7 8.1 83 198-286 206-293 (345)
138 PRK06816 3-oxoacyl-(acyl carri 93.3 0.35 7.6E-06 51.6 8.8 88 198-289 270-365 (378)
139 PRK05963 3-oxoacyl-(acyl carri 92.2 0.31 6.7E-06 50.5 6.6 85 196-287 223-313 (326)
140 PRK09258 3-oxoacyl-(acyl carri 92.2 0.39 8.5E-06 50.0 7.3 87 196-289 235-327 (338)
141 KOG1392 Acetyl-CoA acetyltrans 92.1 0.13 2.8E-06 52.2 3.3 94 198-292 66-160 (465)
142 cd00825 decarbox_cond_enzymes 91.8 0.56 1.2E-05 48.3 7.9 78 200-277 205-286 (332)
143 PRK07204 3-oxoacyl-(acyl carri 91.0 0.43 9.3E-06 49.5 6.1 82 198-286 228-315 (329)
144 PRK04262 hypothetical protein; 91.0 0.5 1.1E-05 49.7 6.6 68 200-271 209-281 (347)
145 PRK09352 3-oxoacyl-(acyl carri 90.7 0.49 1.1E-05 48.7 6.2 84 197-287 216-305 (319)
146 PF13723 Ketoacyl-synt_2: Beta 90.6 5.1 0.00011 39.7 12.8 117 197-323 33-172 (218)
147 PRK12879 3-oxoacyl-(acyl carri 90.6 0.91 2E-05 46.8 8.0 83 198-287 223-311 (325)
148 TIGR00747 fabH 3-oxoacyl-(acyl 90.3 0.68 1.5E-05 47.7 6.7 84 197-287 216-305 (318)
149 PRK06840 hypothetical protein; 89.7 0.94 2E-05 47.2 7.3 79 201-287 238-322 (339)
150 PLN02326 3-oxoacyl-[acyl-carri 89.5 0.74 1.6E-05 49.1 6.5 83 198-287 278-366 (379)
151 cd00327 cond_enzymes Condensin 89.5 1.5 3.1E-05 43.3 8.2 79 199-277 144-226 (254)
152 PRK13359 beta-ketoadipyl CoA t 89.5 1.4 3E-05 47.5 8.5 94 202-320 298-399 (400)
153 PRK08242 acetyl-CoA acetyltran 89.2 1.1 2.3E-05 48.4 7.4 91 203-320 303-401 (402)
154 PRK09050 beta-ketoadipyl CoA t 88.9 1.1 2.4E-05 48.2 7.3 94 202-320 299-400 (401)
155 cd00830 KAS_III Ketoacyl-acyl 88.7 1.3 2.8E-05 45.5 7.4 84 197-287 220-309 (320)
156 PLN02287 3-ketoacyl-CoA thiola 88.0 1.4 3.1E-05 48.3 7.5 96 202-323 333-437 (452)
157 PRK06445 acetyl-CoA acetyltran 87.9 1.6 3.5E-05 46.8 7.8 67 202-274 294-368 (394)
158 PRK07515 3-oxoacyl-(acyl carri 87.9 1.4 3.1E-05 46.6 7.3 86 196-287 267-358 (372)
159 PRK05656 acetyl-CoA acetyltran 87.5 2.3 4.9E-05 45.7 8.6 93 202-321 293-393 (393)
160 PF02803 Thiolase_C: Thiolase, 87.5 1.5 3.3E-05 39.4 6.1 70 202-277 24-101 (123)
161 PRK07850 acetyl-CoA acetyltran 87.4 2.1 4.6E-05 45.9 8.3 91 202-320 287-386 (387)
162 CHL00203 fabH 3-oxoacyl-acyl-c 86.7 2 4.4E-05 44.6 7.5 81 200-287 226-312 (326)
163 PRK06205 acetyl-CoA acetyltran 86.3 1.7 3.6E-05 46.9 6.8 94 202-320 300-402 (404)
164 PRK06366 acetyl-CoA acetyltran 86.2 2 4.4E-05 46.0 7.3 74 202-283 287-369 (388)
165 PRK07801 acetyl-CoA acetyltran 86.1 4.5 9.7E-05 43.2 9.9 84 418-502 297-380 (382)
166 PRK06504 acetyl-CoA acetyltran 85.4 6.8 0.00015 42.1 10.9 58 418-476 305-365 (390)
167 PRK06147 3-oxoacyl-(acyl carri 85.2 1.8 3.9E-05 45.7 6.3 88 201-288 235-330 (348)
168 PRK07661 acetyl-CoA acetyltran 85.2 6.8 0.00015 42.1 10.8 84 418-503 306-390 (391)
169 PRK09051 beta-ketothiolase; Pr 84.9 2.1 4.5E-05 46.1 6.6 92 202-320 294-393 (394)
170 PRK06954 acetyl-CoA acetyltran 84.0 4.6 0.0001 43.4 8.8 84 418-503 312-396 (397)
171 PRK05790 putative acyltransfer 83.8 7.3 0.00016 41.7 10.3 84 419-503 309-392 (393)
172 TIGR01930 AcCoA-C-Actrans acet 83.8 5.2 0.00011 42.8 9.1 82 419-501 304-385 (386)
173 cd00751 thiolase Thiolase are 83.6 2.2 4.8E-05 45.5 6.2 41 202-247 287-328 (386)
174 PRK09052 acetyl-CoA acetyltran 82.6 4.1 8.8E-05 43.9 7.7 93 201-320 298-398 (399)
175 COG3425 PksG 3-hydroxy-3-methy 82.2 5.1 0.00011 42.7 8.0 94 199-320 208-308 (377)
176 PRK07851 acetyl-CoA acetyltran 81.5 8.6 0.00019 41.5 9.7 84 418-503 320-404 (406)
177 PRK08235 acetyl-CoA acetyltran 81.4 8 0.00017 41.6 9.4 82 419-502 309-391 (393)
178 COG0332 FabH 3-oxoacyl-[acyl-c 81.3 2.4 5.3E-05 44.4 5.2 88 193-286 216-308 (323)
179 PRK08947 fadA 3-ketoacyl-CoA t 81.3 5.3 0.00011 42.9 8.0 69 202-275 284-362 (387)
180 TIGR02430 pcaF beta-ketoadipyl 81.1 3.3 7.1E-05 44.7 6.4 70 202-275 298-375 (400)
181 cd00831 CHS_like Chalcone and 80.5 3.5 7.5E-05 43.4 6.2 87 197-287 256-350 (361)
182 PLN03169 chalcone synthase fam 80.1 5 0.00011 43.1 7.3 87 198-286 279-374 (391)
183 cd00829 SCP-x_thiolase Thiolas 78.9 6 0.00013 41.8 7.4 43 201-248 252-295 (375)
184 COG1214 Inactive homolog of me 78.7 6 0.00013 39.1 6.8 59 199-257 38-97 (220)
185 PRK06690 acetyl-CoA acetyltran 78.1 6.1 0.00013 42.1 7.1 70 201-276 259-336 (361)
186 PRK07108 acetyl-CoA acetyltran 77.5 6.7 0.00015 42.2 7.3 52 419-471 308-359 (392)
187 PRK08257 acetyl-CoA acetyltran 77.4 6.6 0.00014 43.6 7.4 79 202-286 294-382 (498)
188 PRK08963 fadI 3-ketoacyl-CoA t 76.0 29 0.00063 37.7 11.8 85 418-503 326-427 (428)
189 cd00827 init_cond_enzymes "ini 75.5 6.9 0.00015 40.1 6.6 92 194-289 217-315 (324)
190 TIGR02445 fadA fatty oxidation 75.1 11 0.00024 40.3 8.2 67 202-274 282-358 (385)
191 PRK07516 acetyl-CoA acetyltran 74.9 31 0.00068 36.8 11.6 57 418-475 277-351 (389)
192 TIGR01835 HMG-CoA-S_prok 3-hyd 73.6 7 0.00015 41.7 6.2 73 197-270 202-286 (379)
193 PRK06059 lipid-transfer protei 73.2 19 0.00041 38.6 9.5 68 202-274 275-367 (399)
194 PRK06064 acetyl-CoA acetyltran 72.8 12 0.00026 39.9 7.8 69 202-275 260-353 (389)
195 PRK06633 acetyl-CoA acetyltran 72.4 18 0.00038 39.0 8.9 78 419-503 308-391 (392)
196 PRK08170 acetyl-CoA acetyltran 72.1 20 0.00043 39.0 9.3 25 202-226 309-333 (426)
197 TIGR00329 gcp_kae1 metallohydr 71.8 9.5 0.00021 39.5 6.5 36 199-234 49-84 (305)
198 cd00826 nondecarbox_cond_enzym 71.7 9.9 0.00021 40.8 6.8 69 202-275 271-364 (393)
199 PRK08256 lipid-transfer protei 71.0 13 0.00029 39.7 7.6 68 202-274 266-358 (391)
200 KOG2708 Predicted metalloprote 70.9 13 0.00028 37.1 6.7 85 199-289 50-135 (336)
201 PRK09268 acetyl-CoA acetyltran 69.6 25 0.00055 38.3 9.4 26 201-226 310-335 (427)
202 PF02801 Ketoacyl-synt_C: Beta 68.8 1.4 3.1E-05 38.8 -0.3 77 201-277 26-110 (119)
203 PRK12880 3-oxoacyl-(acyl carri 67.7 13 0.00028 39.3 6.6 69 197-269 239-311 (353)
204 PRK12578 acetyl-CoA acetyltran 67.1 12 0.00026 39.9 6.3 42 202-248 259-301 (385)
205 TIGR03725 bact_YeaZ universal 67.1 8.4 0.00018 37.3 4.7 37 198-234 33-69 (202)
206 PRK09604 UGMP family protein; 66.6 14 0.00031 38.7 6.6 49 198-246 51-104 (332)
207 PTZ00455 3-ketoacyl-CoA thiola 66.4 15 0.00033 40.1 6.9 69 202-275 311-404 (438)
208 PRK08131 acetyl-CoA acetyltran 65.1 44 0.00095 36.1 10.1 52 419-471 314-367 (401)
209 PRK14691 3-oxoacyl-(acyl carri 65.1 15 0.00032 38.8 6.4 47 200-246 206-253 (342)
210 PRK09185 3-oxoacyl-(acyl carri 65.1 28 0.00061 37.2 8.6 45 202-246 262-307 (392)
211 cd00834 KAS_I_II Beta-ketoacyl 64.2 11 0.00024 40.0 5.4 77 201-277 276-358 (406)
212 PRK14878 UGMP family protein; 64.0 11 0.00025 39.3 5.3 52 194-246 41-97 (323)
213 TIGR03150 fabF beta-ketoacyl-a 63.1 11 0.00025 40.0 5.2 45 202-246 277-322 (407)
214 PLN02644 acetyl-CoA C-acetyltr 62.6 17 0.00037 39.0 6.4 66 203-275 294-368 (394)
215 KOG1390 Acetyl-CoA acetyltrans 62.1 9.2 0.0002 39.9 3.9 80 418-502 311-394 (396)
216 PF00814 Peptidase_M22: Glycop 62.0 9 0.00019 39.0 3.9 55 199-257 30-89 (268)
217 PRK07314 3-oxoacyl-(acyl carri 61.9 13 0.00027 39.9 5.3 45 202-246 278-323 (411)
218 PRK00768 nadE NAD synthetase; 60.2 2.1E+02 0.0045 29.3 13.5 150 142-316 3-179 (268)
219 TIGR03723 bact_gcp putative gl 60.0 25 0.00054 36.6 6.9 56 198-257 49-109 (314)
220 PRK06519 3-oxoacyl-(acyl carri 59.6 27 0.00059 37.7 7.3 71 201-275 281-353 (398)
221 TIGR02446 FadI fatty oxidation 59.5 61 0.0013 35.3 10.1 19 305-323 265-283 (430)
222 cd00828 elong_cond_enzymes "el 59.3 16 0.00034 39.0 5.5 46 200-245 274-320 (407)
223 PRK06289 acetyl-CoA acetyltran 59.1 37 0.0008 36.5 8.2 42 202-248 278-320 (403)
224 PRK06365 acetyl-CoA acetyltran 58.8 40 0.00087 36.7 8.5 41 202-247 295-338 (430)
225 PRK07855 lipid-transfer protei 57.8 31 0.00067 37.0 7.3 25 202-226 268-292 (386)
226 COG0533 QRI7 Metal-dependent p 56.7 30 0.00065 36.5 6.7 85 200-289 52-137 (342)
227 smart00825 PKS_KS Beta-ketoacy 56.4 30 0.00065 37.0 7.0 47 200-246 279-326 (424)
228 PTZ00050 3-oxoacyl-acyl carrie 55.8 31 0.00067 37.3 7.0 47 200-246 283-331 (421)
229 TIGR01796 CM_mono_aroH monofun 55.6 27 0.00059 31.2 5.3 55 202-260 22-79 (117)
230 TIGR03722 arch_KAE1 universal 55.3 17 0.00037 37.9 4.8 37 194-231 42-78 (322)
231 PLN02787 3-oxoacyl-[acyl-carri 53.8 29 0.00062 39.1 6.5 45 202-246 407-452 (540)
232 PRK07937 lipid-transfer protei 53.5 43 0.00093 35.5 7.4 75 204-285 250-333 (352)
233 PRK08313 acetyl-CoA acetyltran 53.4 53 0.0012 35.1 8.3 42 201-247 256-300 (386)
234 PRK12404 stage V sporulation p 52.5 51 0.0011 34.7 7.6 89 202-292 208-313 (334)
235 cd00832 CLF Chain-length facto 52.4 26 0.00056 37.7 5.7 47 200-246 270-317 (399)
236 KOG2707 Predicted metalloprote 52.2 32 0.0007 36.4 6.0 49 199-247 83-136 (405)
237 PRK05952 3-oxoacyl-(acyl carri 51.7 24 0.00053 37.7 5.3 46 200-245 254-300 (381)
238 PF02803 Thiolase_C: Thiolase, 51.7 32 0.00069 30.9 5.2 83 418-502 39-122 (123)
239 PRK06157 acetyl-CoA acetyltran 51.7 68 0.0015 34.5 8.8 42 202-248 268-312 (398)
240 PRK06158 thiolase; Provisional 50.4 47 0.001 35.5 7.2 41 202-247 256-297 (384)
241 PRK06501 3-oxoacyl-(acyl carri 49.1 38 0.00083 36.7 6.4 44 202-245 291-335 (425)
242 TIGR02845 spore_V_AD stage V s 48.9 70 0.0015 33.6 7.9 89 202-292 204-308 (327)
243 PRK09605 bifunctional UGMP fam 48.8 26 0.00056 39.1 5.2 59 194-257 45-108 (535)
244 PRK06066 acetyl-CoA acetyltran 48.5 46 0.001 35.7 6.8 40 203-247 259-301 (385)
245 PTZ00340 O-sialoglycoprotein e 48.2 52 0.0011 34.9 7.0 58 200-257 51-109 (345)
246 PF01135 PCMT: Protein-L-isoas 47.8 18 0.0004 35.4 3.3 40 459-498 50-89 (209)
247 PRK08722 3-oxoacyl-(acyl carri 47.7 36 0.00078 36.8 5.9 45 201-245 279-324 (414)
248 PRK06333 3-oxoacyl-(acyl carri 47.5 70 0.0015 34.4 8.2 45 201-245 289-334 (424)
249 COG0304 FabB 3-oxoacyl-(acyl-c 46.4 35 0.00075 37.1 5.5 74 202-276 278-356 (412)
250 PLN03170 chalcone synthase; Pr 45.4 66 0.0014 34.7 7.4 71 197-271 278-354 (401)
251 cd00833 PKS polyketide synthas 44.7 45 0.00097 35.5 6.1 47 199-245 278-325 (421)
252 PRK09116 3-oxoacyl-(acyl carri 44.3 35 0.00076 36.8 5.2 44 202-245 277-321 (405)
253 PLN02836 3-oxoacyl-[acyl-carri 43.3 1.2E+02 0.0025 33.1 9.1 45 201-245 300-345 (437)
254 COG4126 Hydantoin racemase [Am 42.4 1.6E+02 0.0034 29.4 8.7 100 157-277 119-218 (230)
255 PRK08304 stage V sporulation p 42.3 90 0.0019 33.0 7.5 86 202-289 210-311 (337)
256 PRK07910 3-oxoacyl-(acyl carri 42.2 49 0.0011 35.8 5.9 45 202-246 288-333 (418)
257 cd02185 AroH Chorismate mutase 40.9 53 0.0011 29.4 4.8 56 202-260 22-79 (117)
258 KOG1406 Peroxisomal 3-ketoacyl 39.9 27 0.00059 35.5 3.2 29 198-226 270-298 (408)
259 PLN03173 chalcone synthase; Pr 39.8 89 0.0019 33.6 7.4 70 197-270 274-349 (391)
260 PF07451 SpoVAD: Stage V sporu 39.2 25 0.00053 36.6 2.8 86 202-289 205-306 (329)
261 PF07736 CM_1: Chorismate muta 39.2 66 0.0014 28.8 5.1 57 197-257 17-76 (118)
262 PLN03171 chalcone synthase-lik 38.7 96 0.0021 33.4 7.4 71 196-271 275-360 (399)
263 PLN03172 chalcone synthase fam 35.8 59 0.0013 35.0 5.2 69 198-270 275-349 (393)
264 KOG1389 3-oxoacyl CoA thiolase 35.5 78 0.0017 33.2 5.7 68 204-277 324-399 (435)
265 PF00195 Chal_sti_synt_N: Chal 33.6 2E+02 0.0043 28.7 8.1 68 418-491 119-190 (226)
266 PRK13410 molecular chaperone D 33.6 98 0.0021 35.8 6.8 67 198-268 307-373 (668)
267 PRK09585 anmK anhydro-N-acetyl 31.9 1E+02 0.0022 32.9 6.2 76 191-266 62-147 (365)
268 KOG1202 Animal-type fatty acid 28.6 90 0.0019 38.4 5.3 123 198-323 87-247 (2376)
269 COG3053 CitC Citrate lyase syn 28.4 3.6E+02 0.0077 28.2 8.9 106 120-245 209-314 (352)
270 PRK07103 polyketide beta-ketoa 27.3 1.3E+02 0.0027 32.4 6.1 25 202-226 283-307 (410)
271 COG2518 Pcm Protein-L-isoaspar 27.2 58 0.0013 32.1 3.1 38 458-497 51-88 (209)
272 CHL00094 dnaK heat shock prote 27.1 1.4E+02 0.003 34.2 6.6 45 202-247 311-355 (621)
273 PLN03184 chloroplast Hsp70; Pr 26.9 1.5E+02 0.0032 34.4 6.8 63 202-268 348-410 (673)
274 cd01453 vWA_transcription_fact 26.2 1.8E+02 0.0038 27.6 6.2 81 202-289 29-117 (183)
275 PRK05183 hscA chaperone protei 26.2 1.5E+02 0.0033 33.9 6.7 65 200-268 309-373 (616)
276 KOG1394 3-oxoacyl-(acyl-carrie 25.7 72 0.0016 34.0 3.6 46 201-246 302-348 (440)
277 PF09936 Methyltrn_RNA_4: SAM- 25.6 2.1E+02 0.0046 27.6 6.4 92 387-494 48-143 (185)
278 PRK00290 dnaK molecular chaper 25.2 1.6E+02 0.0035 33.7 6.7 64 201-268 308-371 (627)
279 KOG1391 Acetyl-CoA acetyltrans 25.1 74 0.0016 32.4 3.4 49 203-257 296-344 (396)
280 TIGR02350 prok_dnaK chaperone 25.0 1.3E+02 0.0029 34.0 5.9 65 200-268 305-369 (595)
281 TIGR01991 HscA Fe-S protein as 24.8 2.7E+02 0.0059 31.7 8.4 45 202-247 295-339 (599)
282 PTZ00186 heat shock 70 kDa pre 24.2 2E+02 0.0044 33.2 7.3 63 202-268 336-398 (657)
283 KOG1794 N-Acetylglucosamine ki 22.9 3.3E+02 0.0072 28.4 7.6 113 198-322 45-165 (336)
284 PRK08329 threonine synthase; V 22.1 83 0.0018 33.1 3.4 34 462-495 312-345 (347)
285 PRK13411 molecular chaperone D 21.1 1.9E+02 0.0041 33.3 6.3 44 202-246 310-353 (653)
286 PF09269 DUF1967: Domain of un 20.6 1.9E+02 0.0041 23.1 4.4 36 138-173 11-46 (69)
287 PF08745 UPF0278: UPF0278 fami 20.5 33 0.00072 33.5 0.0 51 127-181 41-91 (205)
288 PTZ00009 heat shock 70 kDa pro 20.4 2.1E+02 0.0046 33.0 6.4 64 202-268 315-378 (653)
289 TIGR03595 Obg_CgtA_exten Obg f 20.4 3.1E+02 0.0066 21.9 5.6 36 138-173 11-46 (69)
290 PLN02854 3-ketoacyl-CoA syntha 20.3 3.7E+02 0.0081 30.2 8.1 42 202-247 387-434 (521)
No 1
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=6.9e-121 Score=981.00 Aligned_cols=519 Identities=78% Similarity=1.294 Sum_probs=487.0
Q ss_pred hhhhhhhhhccccCCCcchhhccccCCcccccccchhhhhcccccccchhHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Q 009598 6 IDRERLTAEMAFKEDSSAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNFATIIMFVLIVPLSIATVIQLSGLKLDRILELL 85 (531)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (531)
|++++.+.|+.+++...+++++|++||||++|||+||||+||||+++|...+++++++|++++++.++.+++++|+..+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (521)
T PLN02854 1 MDKERLTAEMAFKDSSSAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLTIATLVQITGLEFDTVSELW 80 (521)
T ss_pred CchhhhhHHHhccCCcceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 56788888888887778888999999999999999999999999999944447788999998899999999999988888
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHH
Q 009598 86 SKEKLQLNMIIDAASDQLAVSTMLFFLFGLYWSKRSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKR 165 (531)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~k 165 (531)
...+.+++ ++ +++++++++++++++|+++||++||++||+||+|++++++|.+.|+++....|.|++++++||+|
T Consensus 81 ~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 155 (521)
T PLN02854 81 SNQALHLD----TA-TRLTGSAFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRR 155 (521)
T ss_pred HHhhhHHh----HH-HHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 76211455 77 78888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcC
Q 009598 166 IASRASVGDETYLSRGITSRPPNICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYK 245 (531)
Q Consensus 166 i~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LG 245 (531)
|++|||+|++||+|+..+..||+.+|+++|+|++++++.|+++||+++|++|+|||+||++||+++++||++++|+++||
T Consensus 156 ~~~~sg~g~~ty~P~~~~~~~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LG 235 (521)
T PLN02854 156 ISTRSGLGDETYLPRGITSRPPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYK 235 (521)
T ss_pred HHHhcCCCCccccCccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCc
Q 009598 246 LRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDR 325 (531)
Q Consensus 246 l~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~ 325 (531)
+++|+.+|||+||||+||++||++|+++++++++++||||++|.+|.+||.++||++++++++|||||+|+||++++.++
T Consensus 236 lr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~ 315 (521)
T PLN02854 236 LRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDR 315 (521)
T ss_pred CCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999976544
Q ss_pred ccccceeeeEEEEEecCCCCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHH
Q 009598 326 SRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKM 405 (531)
Q Consensus 326 ~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v 405 (531)
++++|+|.+++++++++|++.|+|+++++|+.|..|+++++|+|.+++++++.|++++||.|+|.+|+++|+...+.+.+
T Consensus 316 ~~~k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L 395 (521)
T PLN02854 316 KRSKYQLVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKL 395 (521)
T ss_pred cccchheeeEEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999988888999999999999999999999999999999999998888777666
Q ss_pred HHhhccCccccccccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEE
Q 009598 406 FKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRV 485 (531)
Q Consensus 406 ~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~V 485 (531)
.+..++.|+|+|++||||||+||+|+++++.++++||+++++.|+|+++++|||||||||+||+|++++++|++++||+|
T Consensus 396 ~~~gl~~~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~V 475 (521)
T PLN02854 396 LKAKVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRV 475 (521)
T ss_pred HHcCCCccCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEE
Confidence 67778888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeChhHhhheeeeEEccCCCCC--CCCCCCcccccccCCCCCCCC
Q 009598 486 WQIAFGSGFKCNSAVWRALMDIPVG--NWRGNAWVDSIDKYPVKLNVA 531 (531)
Q Consensus 486 l~i~fGsG~~~~s~v~r~~~~~~~~--~~~~~~w~~~~~~~p~~~~~~ 531 (531)
||+|||+||+||+++|||++++++. . +|||+||||+|||++|.|
T Consensus 476 l~iaFGsGft~~sav~~~~~~~~~~~~~--~~~w~~~i~~yp~~~~~~ 521 (521)
T PLN02854 476 WQIAFGSGFKCNSAVWKALREIPTGEST--GNPWADSIDRYPVKVPVA 521 (521)
T ss_pred EEEEEchhhhhhheeeEEeccCCccccC--CCCchhhHhhCCCCCCCC
Confidence 9999999999999999999999864 4 699999999999999976
No 2
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.3e-120 Score=976.85 Aligned_cols=500 Identities=63% Similarity=1.058 Sum_probs=475.3
Q ss_pred CCcchhhccccCCcccccccchhhhhcccccccchhHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhhhhhhHH
Q 009598 20 DSSAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNFATIIMFVLIVPLSIATVIQLSGLKLDRILELLSKEKLQLNMIIDAA 99 (531)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (531)
++...+++|++||||++|+|+||||+||||+++| .++++++|++++++.++.+++++|+..+|..+ +++ ++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~ 78 (511)
T PLN02192 8 TPLIEPSSSRKLPDFKKSVKLKYVKLGYHYLITH---GMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHL--KFN----LI 78 (511)
T ss_pred CcccccchhhhcchHHHhhhhhhhhhhhHHHHhh---hHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH--HHH----HH
Confidence 3445568899999999999999999999999999 89999999999999999999999988888765 455 66
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeec
Q 009598 100 SDQLAVSTMLFFLFGLYWSKRSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLS 179 (531)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~ 179 (531)
+++++++++++++++|+++||++|||+||+||+|++++++|.+.++++....|.|++++++||+|+++|||+|++||+|
T Consensus 79 -~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p 157 (511)
T PLN02192 79 -SVILCSTLLVFLSTLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLP 157 (511)
T ss_pred -HHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCC
Confidence 7777778888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCcchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCC
Q 009598 180 RGITSRPPNICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMG 259 (531)
Q Consensus 180 ~~~~~~~~~~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~g 259 (531)
+..+..|++.+|+++|+|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++|+.+|||+|||
T Consensus 158 ~~~~~~~~~~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmG 237 (511)
T PLN02192 158 EAVLNVPPNPCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMG 237 (511)
T ss_pred hhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999899999999999
Q ss_pred chHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEE
Q 009598 260 CSAGLISIELAKNLLKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTH 339 (531)
Q Consensus 260 Csg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~ 339 (531)
|+||++||++|+++|+++++++||||++|++|.+||.++||+++++||+|||||+|+||++++.++++++|+|.+.++++
T Consensus 238 CSggl~aLdlA~~lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~ 317 (511)
T PLN02192 238 CSAGLISIDLAKHLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTH 317 (511)
T ss_pred hhhHHHHHHHHHHHHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997655556889999999999
Q ss_pred ecCCCCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccc
Q 009598 340 KGADDKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKL 419 (531)
Q Consensus 340 ~~~d~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~ 419 (531)
.++|++.|+|+++++|++|+.|++|+||+|.+++++++.|++++||.++|.+|+++|++.+.++++++.+++.|+|+++.
T Consensus 318 ~~~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~ 397 (511)
T PLN02192 318 KGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKL 397 (511)
T ss_pred ecCChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888889999999888889999999
Q ss_pred cccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhhee
Q 009598 420 AFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSA 499 (531)
Q Consensus 420 did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~ 499 (531)
+|||||+||+|++++|.++++||++++++|+|+++++|||||||+|+||+|++++++|++++||+|||+|||+||+||++
T Consensus 398 ~Idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sa 477 (511)
T PLN02192 398 AFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSA 477 (511)
T ss_pred hhceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEccCCCCCCCCCCCcccccccCCCCCCC
Q 009598 500 VWRALMDIPVGNWRGNAWVDSIDKYPVKLNV 530 (531)
Q Consensus 500 v~r~~~~~~~~~~~~~~w~~~~~~~p~~~~~ 530 (531)
||||+++++++.+ .|||+||||+|||++|.
T Consensus 478 v~~~~~~~~~~~~-~~~w~~~i~~yp~~~~~ 507 (511)
T PLN02192 478 VWKALRTVNPAKE-KNPWMDEIHEFPVDVPK 507 (511)
T ss_pred heeeecccCCccc-CCCchhhHHhCCCCCCC
Confidence 9999999986541 49999999999999985
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.4e-116 Score=945.77 Aligned_cols=497 Identities=60% Similarity=1.008 Sum_probs=471.2
Q ss_pred CCcchhhccccCCcccccccchhhhhcccccccchhHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhhhhhhHH
Q 009598 20 DSSAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNFATIIMFVLIVPLSIATVIQLSGLKLDRILELLSKEKLQLNMIIDAA 99 (531)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (531)
+-+++|++|++||||++|+|+||||+||||+++| .++++++|++++++.++.+++.+|+..+|..+ +++ ++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~ 74 (502)
T PLN02377 4 GGEIRIHQTRMLPDFLQSVNLKYVKLGYHYLISN---LLTLCFIPLIIIISIEASQMNPDDLRQLWIHL--QYN----LV 74 (502)
T ss_pred CceEEEeehhhCchHHHhhhhhhhhhhhHHHHhh---hHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH--HHH----HH
Confidence 4468999999999999999999999999999999 89999999999999999999999988888766 555 77
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeec
Q 009598 100 SDQLAVSTMLFFLFGLYWSKRSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLS 179 (531)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~ 179 (531)
+++++++++++++++|+++||++||++||+||+|++++++|.+.++++....|.|++++++||+||+++|||+++||+|
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p 153 (502)
T PLN02377 75 -SIIICSAFLVFGLTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVP 153 (502)
T ss_pred -HHHHHHHHHHHHHHHHHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccC
Confidence 7777878888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCcchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCC
Q 009598 180 RGITSRPPNICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMG 259 (531)
Q Consensus 180 ~~~~~~~~~~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~g 259 (531)
+..++.|++.+|+++++|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++|+.+|||+|||
T Consensus 154 ~~~~~~~~~~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmG 233 (502)
T PLN02377 154 EAMHYIPPRPSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMG 233 (502)
T ss_pred chhccCCccchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEE
Q 009598 260 CSAGLISIELAKNLLKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTH 339 (531)
Q Consensus 260 Csg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~ 339 (531)
|+||++||++|+++++++++++||||++|++|.+|+.++++++++++++|||||+|+||++++.++++++|++.++++++
T Consensus 234 Csggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~ 313 (502)
T PLN02377 234 CSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTH 313 (502)
T ss_pred hhHHHHHHHHHHHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEE
Confidence 99999999999999999999999999999999999988888999999999999999999997655556889999999999
Q ss_pred ecCCCCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccc
Q 009598 340 KGADDKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKL 419 (531)
Q Consensus 340 ~~~d~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~ 419 (531)
.++|++.|+|+++++|+.|..|+++++|+|.++|++++.|++++||.|+|++||+.++.....+++++..++.+.|++++
T Consensus 314 ~~~d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~ 393 (502)
T PLN02377 314 RGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKL 393 (502)
T ss_pred EEEcCCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHh
Confidence 99999999999999998898999999999999999999999999999999999998877766778887777777889999
Q ss_pred cccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhhee
Q 009598 420 AFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSA 499 (531)
Q Consensus 420 did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~ 499 (531)
||||||+||+|+++++.++++||++++++|+|+++++|||||||||+||+|++++++|++++||+|||+|||+||+|+++
T Consensus 394 didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~ 473 (502)
T PLN02377 394 AFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSA 473 (502)
T ss_pred hcCEEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEccCCCCCCCCCCCcccccccCCCCC
Q 009598 500 VWRALMDIPVGNWRGNAWVDSIDKYPVKL 528 (531)
Q Consensus 500 v~r~~~~~~~~~~~~~~w~~~~~~~p~~~ 528 (531)
+|||+++++++. +|||+||||+|||++
T Consensus 474 v~~~~~~~~~~~--~~~w~~~i~~yp~~~ 500 (502)
T PLN02377 474 VWEALRHVKPSN--NSPWEDCIDKYPVKL 500 (502)
T ss_pred EEEEecCCCCCC--CCCchhhHhhCCCcc
Confidence 999999998765 699999999999975
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=6e-109 Score=883.93 Aligned_cols=471 Identities=53% Similarity=0.924 Sum_probs=445.5
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 009598 47 YGYSCNFATIIMFVLIVPLSIATVIQLSGLKLDRILELLSKEKLQLNMIIDAASDQLAVSTMLFFLFGLYWSKRSSPVYL 126 (531)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v~I 126 (531)
+.|+++| .++++++|++++++.++.+++.+|+..+|..+ +++ ++ +++++++++++++++|+++||++|||
T Consensus 1 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~vyl 70 (478)
T PLN02932 1 FNYLMAH---RFKLCFLPLMVGIAMEASRLSTQDLQNFYLYL--QNN----LT-SLTMFFLYLALGSTLYLMTRPKPVYL 70 (478)
T ss_pred ChhHHHh---HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH--HHH----HH-HHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 3578999 89999999999999999999999988888765 455 66 77777788888889999999999999
Q ss_pred EEEeEecCCCCceecHHHHHHHhhcc---CCCCHHh---HHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHH
Q 009598 127 VDFSCYKPADERKMSMEAFLKMSEES---SFFQEES---LQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADE 200 (531)
Q Consensus 127 v~~~~y~P~~~~~vs~~~~~~~~~~~---~~~~~~~---~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~ 200 (531)
+||+||+|++++++|.+.++++..+. |.|++++ ++||+||++||||++|||+|+..+..|+..+|+.+++|+++
T Consensus 71 ~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~~ea~~ 150 (478)
T PLN02932 71 VDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRKETEE 150 (478)
T ss_pred EeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999766 7898887 99999999999999999999999988999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCC
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNS 280 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~ 280 (531)
++++|+++||+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+||||+|+++||++|++++++++++
T Consensus 151 la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~ 230 (478)
T PLN02932 151 VIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNT 230 (478)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999988889999999999999999899999999999999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCccc
Q 009598 281 YAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIV 360 (531)
Q Consensus 281 ~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~ 360 (531)
+||||++|.+|.+||.+++|+|++++++|||||||+||++++.++++++|+|.++++++.++||+.|+|+++++|++|..
T Consensus 231 ~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~ 310 (478)
T PLN02932 231 YALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIV 310 (478)
T ss_pred eEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcc
Confidence 99999999999999988889999999999999999999997754456899999999999999999999999999989999
Q ss_pred ccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHHHHHH
Q 009598 361 GVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQKN 440 (531)
Q Consensus 361 g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~~ 440 (531)
|++|+|++|.+++++++.||+++||.|+|++|+++|++++.++++++.+.+.+.|+++++|||||+||+|++++|.++++
T Consensus 311 g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~ 390 (478)
T PLN02932 311 GVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKN 390 (478)
T ss_pred eeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEEccCCCCCCCCCCCcccc
Q 009598 441 LQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRALMDIPVGNWRGNAWVDS 520 (531)
Q Consensus 441 Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~~~~~~~~~~~~~~w~~~ 520 (531)
||++++++|+|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++|||++|++++.. +|||+||
T Consensus 391 LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~--~~~w~~~ 468 (478)
T PLN02932 391 LHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSA--NNPWEDC 468 (478)
T ss_pred cCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcC--CCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998765 6999999
Q ss_pred cccCCCCCC
Q 009598 521 IDKYPVKLN 529 (531)
Q Consensus 521 ~~~~p~~~~ 529 (531)
||+|||++.
T Consensus 469 i~~yp~~~~ 477 (478)
T PLN02932 469 LHKYPVEID 477 (478)
T ss_pred HhhCCCCCC
Confidence 999999864
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.9e-100 Score=807.39 Aligned_cols=427 Identities=63% Similarity=1.077 Sum_probs=405.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCC
Q 009598 102 QLAVSTMLFFLFGLYWSKRSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRG 181 (531)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~ 181 (531)
+-+.++++++++++|+++||++||++||+||+|++++++|.+.++++....|.|++++++||+||+++|||++++|.|+.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~ 117 (466)
T PLN00415 38 VKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRC 117 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCc
Confidence 44555556667788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCcchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCch
Q 009598 182 ITSRPPNICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCS 261 (531)
Q Consensus 182 ~~~~~~~~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCs 261 (531)
.+..|+.++|+++++|+++.++.|+++||+++|++|+|||+||++||++++.|+++++|+++||+++|+.+|||+||||+
T Consensus 118 ~~~~~~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCs 197 (466)
T PLN00415 118 MLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCS 197 (466)
T ss_pred cccCCCCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEeccccch
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEec
Q 009598 262 AGLISIELAKNLLKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKG 341 (531)
Q Consensus 262 g~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~ 341 (531)
|+++||++|+++++++++++||||++|.+|.++|+++|++++++|++|||||||+||++++.++++++|+|.++++++.+
T Consensus 198 ggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~ 277 (466)
T PLN00415 198 AGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKG 277 (466)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCC
Confidence 99999999999999999999999999999998889999999999999999999999999876666689999999999999
Q ss_pred CCCCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccc
Q 009598 342 ADDKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAF 421 (531)
Q Consensus 342 ~d~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~di 421 (531)
.+++.|.|++|.+|++|..|+.|+||+|.+++++++.|++++||.++|++||++|....+.++.++...+.|+||++..+
T Consensus 278 ~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~ 357 (466)
T PLN00415 278 SSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCF 357 (466)
T ss_pred CChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999998888888888777778999998889
Q ss_pred cEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeee
Q 009598 422 EHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVW 501 (531)
Q Consensus 422 d~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~ 501 (531)
+|||+|+||++|+|+++++|||+++++++||++|+|||||||+|+||+|+|++++|++++||++||+|||+||+|+++||
T Consensus 358 ~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~es~v~ 437 (466)
T PLN00415 358 KHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVW 437 (466)
T ss_pred eeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchhhHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCCC-CCCCcccccccCCCCC
Q 009598 502 RALMDIPVGNW-RGNAWVDSIDKYPVKL 528 (531)
Q Consensus 502 r~~~~~~~~~~-~~~~w~~~~~~~p~~~ 528 (531)
|++|++++... ..|||+||||+|||++
T Consensus 438 ~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 438 RALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred HHhccCCcccccCCCCchhhHHhCCCCC
Confidence 99999886531 1399999999999975
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.1e-77 Score=599.82 Aligned_cols=290 Identities=64% Similarity=1.079 Sum_probs=284.5
Q ss_pred HHhcCCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhh
Q 009598 116 YWSKRSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEAR 195 (531)
Q Consensus 116 ~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~ 195 (531)
|+++||++|||+||+||+|++++++|.+.+++++...+.|++++++||+||+++|||+++||+|+..+..|++.++++++
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~ 80 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAR 80 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 196 VEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 196 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
+|++++++.|++++|+++|++|+|||+||+|||.|+|+||+++||+|+||||+|+.+|||+||||||++++|++|++||+
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccC
Q 009598 276 ANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAED 355 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed 355 (531)
.+|+++||||++|++|.+||.|+||+|+++||||||||||+||||++.+++++||+|.|++|||+++||++|+|++|+||
T Consensus 161 ~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD 240 (290)
T PF08392_consen 161 AHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEED 240 (290)
T ss_pred hCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEc
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred CCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHH
Q 009598 356 DQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKM 405 (531)
Q Consensus 356 ~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v 405 (531)
++|+.|++|+||+|.++|+++|.||+++||+|||++||++|+++++.+|+
T Consensus 241 ~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk~ 290 (290)
T PF08392_consen 241 EEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARKV 290 (290)
T ss_pred CCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999988887663
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=1.1e-55 Score=451.94 Aligned_cols=321 Identities=21% Similarity=0.337 Sum_probs=264.6
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHH
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEV 201 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~l 201 (531)
.+++|.++|+|+|+ ++++|+++.+.... ++| ||..++||++|+++.+++. ..+|
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sde------wI~~rtGir~R~~a~~~e~--------------~s~l 55 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDT----SDE------WIETRTGIRERRIAADDET--------------TSDL 55 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCC----Ccc------eeeeecCCceeeecCCCcc--------------HHHH
Confidence 46899999999999 99999999976664 565 8999999999999987754 6899
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNS 280 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~ 280 (531)
+++|+++||+++|++|+|||+||++| +|+++.|++|++||++||+. ++.+||++ .+|+|++.||++|..++++|.++
T Consensus 56 a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 56 AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999996 68999999999999999998 69999999 69999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCccc
Q 009598 281 YAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIV 360 (531)
Q Consensus 281 ~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~ 360 (531)
+||||++|++|+ +.+++||. ++.+|||||+|+||++.+.+. ++..+..++|+..+++++.+......
T Consensus 134 ~vLVVg~e~~S~-~ld~~dR~---t~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~- 200 (323)
T COG0332 134 NVLVVGAETLSR-ILDWTDRD---TCVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT- 200 (323)
T ss_pred EEEEEehhHhhc-cCCHhhcc---ceEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc-
Confidence 999999999998 67788997 678999999999999987321 46678889999988877765432111
Q ss_pred ccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHHHHHH
Q 009598 361 GVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQKN 440 (531)
Q Consensus 361 g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~~ 440 (531)
.+. ......+...|+.| +++...+. .++++..++. ..-.++|||||++||.|.++++.+++.
T Consensus 201 ----~~~------~~~~~~~~m~Gr~v------fk~av~~~-~~~~~~~L~~-~~l~~~dId~~vpHQan~ri~~~i~~~ 262 (323)
T COG0332 201 ----PKE------ESGGGLLVMDGREV------FKFAVRAM-PKAIEEVLEK-AGLTPEDIDWFVPHQANLRIIEAIAKK 262 (323)
T ss_pred ----ccc------cccccceeeccHHH------HHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEccccccHHHHHHHHHH
Confidence 000 00011233333322 22222222 1222222221 111258999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEEc
Q 009598 441 LQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRAL 504 (531)
Q Consensus 441 Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~~ 504 (531)
||++++++ ..++++|||||++|+|+.|+++.++|++|+||+|++.+||+|++|+++++||.
T Consensus 263 l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 263 LGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred cCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 99999999 68999999999999999999999999999999999999999999999999984
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=4.1e-51 Score=432.70 Aligned_cols=347 Identities=20% Similarity=0.288 Sum_probs=271.0
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCCC-CHHhHHH-HHHHHHHcCCCeEEeecC-C---CcCC------C-CC
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSFF-QEESLQF-QKRIASRASVGDETYLSR-G---ITSR------P-PN 188 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~-~~~~~~f-~~ki~~~sGI~er~~~~~-~---~~~~------~-~~ 188 (531)
.+++|.++|...|+ +.++++++.+...+.... +...++. +++|++++||++|+..-+ + +... | ..
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 46899999999999 999999999977643210 1122332 577999999999987532 1 1110 1 13
Q ss_pred cchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee-EEecCCCchHHHHHH
Q 009598 189 ICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT-YNLGGMGCSAGLISI 267 (531)
Q Consensus 189 ~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-fdl~g~gCsg~l~AL 267 (531)
.+++.+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++.+ ++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHH
Confidence 4567789999999999999999999999999999998876555699999999999999988866 4556 8999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCc--cccccccccccceEEEEEeeCCCCc-ccccceeeeEEEEEe-cCC
Q 009598 268 ELAKNLLKANPNSYAVVVSTENITQNWYSGNDR--SMLLCNCLFRMGGAAVLLSNKARDR-SRSKYELVHLVRTHK-GAD 343 (531)
Q Consensus 268 ~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~dr--~~ll~~~lfgDGAaAvLLs~~~~~~-~~~~~~L~~~v~t~~-~~d 343 (531)
++|++++++++.++||||++|.+|.++.+++|+ +++++++||||||+|+||++++... .++.|++.+..++.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 999999999999999999999999766555553 4567889999999999999865421 235577776644443 444
Q ss_pred CCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHh-hccCcccccccccc
Q 009598 344 DKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKA-KVKPYIPDFKLAFE 422 (531)
Q Consensus 344 ~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did 422 (531)
+.....+ .. .| .++.+++++|+.+.+.++..+ +++++. .+. ..|++
T Consensus 252 ~~~~~~i-~~---~G-~~~~l~~~vp~~~~~~i~~~~----------------------~~~L~~~gl~------~~di~ 298 (393)
T PLN03172 252 GAIDGHL-RE---VG-LTFHLLKDVPGLISKNIEKSL----------------------VEAFAPIGIN------DWNSI 298 (393)
T ss_pred ccccceE-Ec---CC-cEEEEechHHHHHHHHHHHHH----------------------HHHhhhcCCC------ccccc
Confidence 4322222 22 12 356778999887664332211 223321 111 37899
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHH----hcCCCCCC---CEEEEEEeChhHh
Q 009598 423 HFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTE----GKGRVARG---DRVWQIAFGSGFK 495 (531)
Q Consensus 423 ~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~----~~gri~~G---D~Vl~i~fGsG~~ 495 (531)
+|++||+|++|++.+++.||++++++.+|+++|++||||||+|+|+.|+++. ++|++++| |++++++||+||+
T Consensus 299 ~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t 378 (393)
T PLN03172 299 FWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLT 378 (393)
T ss_pred eEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcce
Confidence 9999999999999999999999999999999999999999999999999987 45788787 8999999999999
Q ss_pred hheeeeEEc
Q 009598 496 CNSAVWRAL 504 (531)
Q Consensus 496 ~~s~v~r~~ 504 (531)
++++++||.
T Consensus 379 ~~~~ll~~~ 387 (393)
T PLN03172 379 VETVVLHSV 387 (393)
T ss_pred eeeeeeEec
Confidence 999999995
No 9
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=4.5e-51 Score=428.66 Aligned_cols=344 Identities=40% Similarity=0.611 Sum_probs=264.6
Q ss_pred eEEEEEeEecCCCCceecHHHHHHHhhccCC--CCHHhHHHHHHHHHHcCCCeEEeecC--CCcC-------CCCCcchh
Q 009598 124 VYLVDFSCYKPADERKMSMEAFLKMSEESSF--FQEESLQFQKRIASRASVGDETYLSR--GITS-------RPPNICIH 192 (531)
Q Consensus 124 v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~--~~~~~~~f~~ki~~~sGI~er~~~~~--~~~~-------~~~~~~l~ 192 (531)
+||.+++.|+|+ ++++|+++.+++..... +.+...++.++|++++||++|+++.+ ++.. .....+..
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 689999999999 89999999998764211 01234556689999999999999865 3321 12345667
Q ss_pred hhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHH
Q 009598 193 EARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKN 272 (531)
Q Consensus 193 ~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~ 272 (531)
.+.+++.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 88899999999999999999999999999999998777899999999999999997899999997799999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCCCCCCCCC-ccccccccccccceEEEEEeeCCCCcc--cccceeeeEEEEEecCCCCcccc
Q 009598 273 LLKANPNSYAVVVSTENITQNWYSGND-RSMLLCNCLFRMGGAAVLLSNKARDRS--RSKYELVHLVRTHKGADDKHFNC 349 (531)
Q Consensus 273 lL~~~~~~~aLVVstE~~S~~~~~~~d-r~~ll~~~lfgDGAaAvLLs~~~~~~~--~~~~~L~~~v~t~~~~d~~~~~~ 349 (531)
++++++.++||||++|..|. +++++| +.+++++++|||||+|+||++++.... ...+++.+......... .+.
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~ 235 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDS---EDA 235 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecC---CCc
Confidence 99999999999999999988 666666 776667899999999999998765321 12344433222111111 010
Q ss_pred eeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCcc--ccccccccEEEEc
Q 009598 350 VRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYI--PDFKLAFEHFCIH 427 (531)
Q Consensus 350 v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~--p~~~~did~f~~H 427 (531)
+....+. +...+.++++++... ...+ .+.++..++. . ....+|||||++|
T Consensus 236 ~~~~~~~-~~~~~~~~~~v~~~~-------------------------~~~~-~~~i~~~L~~-~~~g~~~~did~~~~H 287 (361)
T cd00831 236 MGWHLGE-EGLTFVLSRDVPRLV-------------------------EKNL-ERVLRKLLAR-LGIGLFKLAFDHWCVH 287 (361)
T ss_pred eEEEEEc-ceEEEEeChhHHHHH-------------------------HHHH-HHHHHHHhcc-ccCCCccccceEEEEC
Confidence 0000000 001112222222111 1111 2223333332 2 2235899999999
Q ss_pred CCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeee
Q 009598 428 SGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVW 501 (531)
Q Consensus 428 q~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~ 501 (531)
|+|+++++.+++.||++++++++|+.++++||||||+|+|++|++++++|++++||+|++++||+|++|++++|
T Consensus 288 ~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 288 PGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 99999999999999999999988889999999999999999999999999999999999999999999999987
No 10
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=3.5e-50 Score=426.09 Aligned_cols=353 Identities=19% Similarity=0.290 Sum_probs=260.7
Q ss_pred HhcCCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhH-HHHHHHHHHcCCCeEEeecCCC----cC---C---
Q 009598 117 WSKRSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESL-QFQKRIASRASVGDETYLSRGI----TS---R--- 185 (531)
Q Consensus 117 ~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~-~f~~ki~~~sGI~er~~~~~~~----~~---~--- 185 (531)
..+.|.+++|.++|.|+|+ ++++|+++.+.+.....-+++++ +.++||++++||++|+++.+++ +. .
T Consensus 15 ~~~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 92 (391)
T PLN03169 15 RAANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGT 92 (391)
T ss_pred ccCCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCC
Confidence 3467889999999999999 99999999986443111122322 3357899999999999874221 10 0
Q ss_pred -CCCcchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc-eeEEecCCCchHH
Q 009598 186 -PPNICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDI-KTYNLGGMGCSAG 263 (531)
Q Consensus 186 -~~~~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~-~~fdl~g~gCsg~ 263 (531)
....++..+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++ .+||++ +||+|+
T Consensus 93 ~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~ 171 (391)
T PLN03169 93 PTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGG 171 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHH
Confidence 11223445788899999999999999999999999999999888999999999999999998777 479999 799999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCC-C-ccccccccccccceEEEEEeeCCCCc-ccccceeeeEEEEEe
Q 009598 264 LISIELAKNLLKANPNSYAVVVSTENITQNWYSGN-D-RSMLLCNCLFRMGGAAVLLSNKARDR-SRSKYELVHLVRTHK 340 (531)
Q Consensus 264 l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~-d-r~~ll~~~lfgDGAaAvLLs~~~~~~-~~~~~~L~~~v~t~~ 340 (531)
+.||++|.+++++++.++||||++|.+|.++.... + ....+++++|||||+|+||++++... ....+++........
T Consensus 172 ~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~i 251 (391)
T PLN03169 172 VAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFL 251 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEc
Confidence 99999999999999999999999999887554221 1 22345678999999999999765320 112344332222111
Q ss_pred cCCCCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHh-hccCccccccc
Q 009598 341 GADDKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKA-KVKPYIPDFKL 419 (531)
Q Consensus 341 ~~d~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~ 419 (531)
...+...+ ......| +.+.+++++|+.+.+.++. ..+++++. .+. .+
T Consensus 252 p~~~~~~~---~~~~~~g-~~~~~g~~v~~~~~~~~~~----------------------~i~~~L~~~gl~------~~ 299 (391)
T PLN03169 252 PGTEKTID---GRLTEEG-INFKLGRELPQKIEDNIEG----------------------FCKKLMKKAGLV------EK 299 (391)
T ss_pred CCCccccC---ceecCCc-eEEEECcHHHHHHHHHHHH----------------------HHHHHHHHcCCC------CC
Confidence 11111111 1111111 1234455555544321111 11233322 121 25
Q ss_pred ccc--EEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCC---CCCEEEEEEeChhH
Q 009598 420 AFE--HFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVA---RGDRVWQIAFGSGF 494 (531)
Q Consensus 420 did--~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~---~GD~Vl~i~fGsG~ 494 (531)
|+| +|++||+|+++++.+++.||++++++.+|++++++||||||+|+|+.|++++++++++ +||++++++||+||
T Consensus 300 did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~ 379 (391)
T PLN03169 300 DYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGI 379 (391)
T ss_pred CCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccH
Confidence 677 9999999999999999999999999988889999999999999999999999888876 69999999999999
Q ss_pred hhheeeeEEc
Q 009598 495 KCNSAVWRAL 504 (531)
Q Consensus 495 ~~~s~v~r~~ 504 (531)
+|+++++|+.
T Consensus 380 s~~~~ll~~~ 389 (391)
T PLN03169 380 TFEGILARNL 389 (391)
T ss_pred hHHHHHHhhh
Confidence 9999999984
No 11
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=5.7e-50 Score=423.87 Aligned_cols=349 Identities=19% Similarity=0.278 Sum_probs=261.0
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCC--CCHHhHHHHHHHHHHcCCCeEEeec-CCC---cCC------C-CC
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSF--FQEESLQFQKRIASRASVGDETYLS-RGI---TSR------P-PN 188 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~--~~~~~~~f~~ki~~~sGI~er~~~~-~~~---~~~------~-~~ 188 (531)
.+++|.++|+..|+ +.++++++.+...+... -.++..+.+++|++++||++|+..- ++. +.. | ..
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 56899999999999 89999999998765321 1122233357899999999998643 211 110 1 13
Q ss_pred cchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCce-eEEecCCCchHHHHHH
Q 009598 189 ICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIK-TYNLGGMGCSAGLISI 267 (531)
Q Consensus 189 ~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~-~fdl~g~gCsg~l~AL 267 (531)
.+++.+.+++.+|+.+|+++||+++|++|+|||+||++|++.+..|+++++|+++||+++++. +||++ +||+||+.||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 456778999999999999999999999999999999997655669999999999999997764 89998 7999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeccCCCCCCCCCC--ccccccccccccceEEEEEeeCCCCc-ccccceeeeEEEEEec-CC
Q 009598 268 ELAKNLLKANPNSYAVVVSTENITQNWYSGND--RSMLLCNCLFRMGGAAVLLSNKARDR-SRSKYELVHLVRTHKG-AD 343 (531)
Q Consensus 268 ~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~d--r~~ll~~~lfgDGAaAvLLs~~~~~~-~~~~~~L~~~v~t~~~-~d 343 (531)
++|++++++++.++||||++|.+|.+|....+ .+++++++||||||+|+||++++... .++.+++.....+... ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 99999999999999999999999986643222 34566889999999999999865321 1233444332222222 22
Q ss_pred CCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccE
Q 009598 344 DKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEH 423 (531)
Q Consensus 344 ~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~ 423 (531)
+. .. +.-++.| ..+.+++++|+...+.++ ++++..+.. ......|+++
T Consensus 251 ~~-~~---~~~~~~g-~~~~l~~~vp~~i~~~~~--------------------------~~l~~~l~~-~~~~~~d~~~ 298 (389)
T PLN03168 251 GA-ID---GHLTEAG-LIFHLMKDVPGLISKNIE--------------------------KFLNEARKC-VGSPDWNEMF 298 (389)
T ss_pred Cc-cC---ceEecCc-eEEEECHHHHHHHHHHHH--------------------------HHHHHHHHh-cCCCccccce
Confidence 21 11 1111112 234556666665443211 111111111 0111257789
Q ss_pred EEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCC--------CEEEEEEeChhHh
Q 009598 424 FCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARG--------DRVWQIAFGSGFK 495 (531)
Q Consensus 424 f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~G--------D~Vl~i~fGsG~~ 495 (531)
|++||+|++|++.+++.|||+++++..|+.++++||||||+|+|+.|+++.++ ++++| |+++++|||+||+
T Consensus 299 ~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t 377 (389)
T PLN03168 299 WAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLT 377 (389)
T ss_pred EEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhh
Confidence 99999999999999999999999999888999999999999999999999875 66655 8999999999999
Q ss_pred hheeeeEEccC
Q 009598 496 CNSAVWRALMD 506 (531)
Q Consensus 496 ~~s~v~r~~~~ 506 (531)
|+++++||..+
T Consensus 378 ~~~~llr~~~~ 388 (389)
T PLN03168 378 LEVLVLRAAAN 388 (389)
T ss_pred hhhhhheeccc
Confidence 99999999654
No 12
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=1.2e-49 Score=421.40 Aligned_cols=348 Identities=19% Similarity=0.278 Sum_probs=267.4
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCC--CCHHhHHHHHHHHHHcCCCeEEeec-CC---CcC--C----C-CC
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSF--FQEESLQFQKRIASRASVGDETYLS-RG---ITS--R----P-PN 188 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~--~~~~~~~f~~ki~~~sGI~er~~~~-~~---~~~--~----~-~~ 188 (531)
.+++|.++|+..|+ +.++++++.+...+... -.+...+.+++|++++||++|+..- ++ ++. . | ..
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 56899999999999 89999999998765321 1222233367899999999998653 22 111 0 1 13
Q ss_pred cchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee-EEecCCCchHHHHHH
Q 009598 189 ICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT-YNLGGMGCSAGLISI 267 (531)
Q Consensus 189 ~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-fdl~g~gCsg~l~AL 267 (531)
.+++.+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++..|+++||+++++.. ++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAGGTVL 171 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHHHHHH
Confidence 4567789999999999999999999999999999999875555589999999999999977765 4556 8999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCc--cccccccccccceEEEEEeeCCCCc-ccccceeeeEEEEEe-cCC
Q 009598 268 ELAKNLLKANPNSYAVVVSTENITQNWYSGNDR--SMLLCNCLFRMGGAAVLLSNKARDR-SRSKYELVHLVRTHK-GAD 343 (531)
Q Consensus 268 ~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~dr--~~ll~~~lfgDGAaAvLLs~~~~~~-~~~~~~L~~~v~t~~-~~d 343 (531)
++|++++++++.++||||++|.+|.+|++++|+ ++++++++|||||+|+||++++... .++.|++.+..++.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~ 251 (391)
T PLN03173 172 RLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSD 251 (391)
T ss_pred HHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCc
Confidence 999999999999999999999999767655553 4567889999999999999754321 124577766544333 344
Q ss_pred CCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHh-hccCcccccccccc
Q 009598 344 DKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKA-KVKPYIPDFKLAFE 422 (531)
Q Consensus 344 ~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did 422 (531)
+. +...... .| .++.+++++|+++.+.++..+ +++++. .+. .+|+|
T Consensus 252 ~~-~~~~i~~---~G-~~~~l~~~vp~~~~~~~~~~i----------------------~~~L~~~gl~------~~di~ 298 (391)
T PLN03173 252 GA-IDGHLRE---VG-LTFHLLKDVPGLISKNVEKSL----------------------TEAFKPLGIS------DWNSL 298 (391)
T ss_pred cc-eeeEEEc---Cc-eEEEEecHHHHHHHHHHHHHH----------------------HHHHHhcCCC------ccccC
Confidence 43 2221221 22 356678888877654322111 233322 222 37899
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhc----CCCCCC---CEEEEEEeChhHh
Q 009598 423 HFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGK----GRVARG---DRVWQIAFGSGFK 495 (531)
Q Consensus 423 ~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~----gri~~G---D~Vl~i~fGsG~~ 495 (531)
+|++||+|+++++.+++.|||+++++.+|++++++||||||+|+|+.|++++++ |.+++| ++++++|||+||+
T Consensus 299 ~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t 378 (391)
T PLN03173 299 FWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLT 378 (391)
T ss_pred eEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHH
Confidence 999999999999999999999999999999999999999999999999999963 444443 8899999999999
Q ss_pred hheeeeEEcc
Q 009598 496 CNSAVWRALM 505 (531)
Q Consensus 496 ~~s~v~r~~~ 505 (531)
+++++++|..
T Consensus 379 ~e~~ll~~~~ 388 (391)
T PLN03173 379 VETVVLHSVA 388 (391)
T ss_pred HHHHHHhhcc
Confidence 9999999854
No 13
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=1.9e-48 Score=413.60 Aligned_cols=350 Identities=20% Similarity=0.262 Sum_probs=259.0
Q ss_pred CCCeEEEEEeEecCCCCceecHHHHHHHhhcc---CCCCHHhHHHHHHHHHHcCCCeEEeecCCC----c------CC-C
Q 009598 121 SSPVYLVDFSCYKPADERKMSMEAFLKMSEES---SFFQEESLQFQKRIASRASVGDETYLSRGI----T------SR-P 186 (531)
Q Consensus 121 ~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~---~~~~~~~~~f~~ki~~~sGI~er~~~~~~~----~------~~-~ 186 (531)
+.+++|+++|.|+|+ ++++|+++.+++... ..+ ++..+.++||++++||++|+++.+++ . .. .
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATKSDHL-TALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhccccc-HHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 357999999999999 999999999875321 111 11122357899999999999986542 0 01 1
Q ss_pred CCcchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCce-eEEecCCCchHHHH
Q 009598 187 PNICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIK-TYNLGGMGCSAGLI 265 (531)
Q Consensus 187 ~~~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~-~fdl~g~gCsg~l~ 265 (531)
...+++.+.+.+.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++. ++++. +||+|++.
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 23456778899999999999999999999999999999997544458999999999999986654 56666 69999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCc---cccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecC
Q 009598 266 SIELAKNLLKANPNSYAVVVSTENITQNWYSGNDR---SMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGA 342 (531)
Q Consensus 266 AL~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~dr---~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~ 342 (531)
||++|.+|+++++.++||||++|.+|..+ ++.|+ ..++++++|||||+|+||+++++..++..+++.......
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~--- 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAI--- 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEE---
Confidence 99999999999999999999999999843 44443 245567899999999999986643222345665433322
Q ss_pred CCCcccceeeccCCCcccccccc-hhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCc---c-ccc
Q 009598 343 DDKHFNCVRQAEDDQGIVGVSLS-RDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPY---I-PDF 417 (531)
Q Consensus 343 d~~~~~~v~~~ed~~G~~g~~ls-kdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~---~-p~~ 417 (531)
+++..+.+.+..++.|..+ .++ +.+|...++.++ ++++..+.+. . ..-
T Consensus 252 ~p~~~~~~~~~~~~~g~~~-~~~~~~vp~~i~~~l~--------------------------~~l~~~l~~~~~~~~g~~ 304 (399)
T PLN03171 252 IPESDDAINMHFTEGGLDG-NIGTRQVPGLIGDNIE--------------------------RCLLDAFAPLLGGDGGAE 304 (399)
T ss_pred ecCCchheEEEEEcCCceE-EECchhHHHHHHHHHH--------------------------HHHHHHHHhhcccccCCC
Confidence 3333333333211112112 233 555544433222 1221111100 0 001
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCC--CCCC---CEEEEEEeCh
Q 009598 418 KLAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGR--VARG---DRVWQIAFGS 492 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gr--i~~G---D~Vl~i~fGs 492 (531)
.+|++|+ +||+|+++++.+++.||++++++..|+.++++||||||+|+|+.|+++.++++ +++| |++++++||+
T Consensus 305 ~~di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~ 383 (399)
T PLN03171 305 WNDLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGP 383 (399)
T ss_pred cccceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcc
Confidence 3677765 69999999999999999999999888899999999999999999999998774 6888 9999999999
Q ss_pred hHhhheeeeEEccC
Q 009598 493 GFKCNSAVWRALMD 506 (531)
Q Consensus 493 G~~~~s~v~r~~~~ 506 (531)
|++|++++|++.+.
T Consensus 384 Glt~~~~ll~~~~~ 397 (399)
T PLN03171 384 GLTVDAMLLHASGH 397 (399)
T ss_pred cHHHHHHHhhcccC
Confidence 99999999998763
No 14
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=9.4e-49 Score=415.93 Aligned_cols=350 Identities=19% Similarity=0.273 Sum_probs=265.3
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCCC-CHHhHH-HHHHHHHHcCCCeEEeecCCC----cCC------C-CC
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSFF-QEESLQ-FQKRIASRASVGDETYLSRGI----TSR------P-PN 188 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~-~~~~~~-f~~ki~~~sGI~er~~~~~~~----~~~------~-~~ 188 (531)
.+.+|.++|+..|+ +.++++++.+...+.... +....+ .+++|++++||++|+..-+++ ... | ..
T Consensus 19 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 45899999999999 899999999987653211 112233 367899999999998753211 110 1 13
Q ss_pred cchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc-eeEEecCCCchHHHHHH
Q 009598 189 ICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDI-KTYNLGGMGCSAGLISI 267 (531)
Q Consensus 189 ~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~-~~fdl~g~gCsg~l~AL 267 (531)
.+++.+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++ ++||++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 45677899999999999999999999999999999988765556999999999999999776 489999 7999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeccCCCCCCCCCC--ccccccccccccceEEEEEeeCCCCc-ccccceeeeEEEEEecCCC
Q 009598 268 ELAKNLLKANPNSYAVVVSTENITQNWYSGND--RSMLLCNCLFRMGGAAVLLSNKARDR-SRSKYELVHLVRTHKGADD 344 (531)
Q Consensus 268 ~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~d--r~~ll~~~lfgDGAaAvLLs~~~~~~-~~~~~~L~~~v~t~~~~d~ 344 (531)
++|++++++++.++||||++|.+|.++..+++ ...++++++|||||+|+||++++... .++.|++......... +.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~p-~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILP-DS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEec-CC
Confidence 99999999999999999999999986644432 23556788999999999999865421 1234555443222211 11
Q ss_pred CcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHh-hccCccccccccccE
Q 009598 345 KHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKA-KVKPYIPDFKLAFEH 423 (531)
Q Consensus 345 ~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~ 423 (531)
+.+..... .+.| +.+.+++++|..+.+.+...+ +++++. .+. .+|+++
T Consensus 255 ~~~~~~~i--~~~G-~~~~l~~~vp~~~~~~i~~~v----------------------~~~L~~~gl~------~~di~~ 303 (401)
T PLN03170 255 EGAIDGHL--REVG-LTFHLLKDVPGLISKNIERSL----------------------EEAFKPLGIT------DYNSIF 303 (401)
T ss_pred cccccceE--EcCC-eEEEEehHHHHHHHHHHHHHH----------------------HHHHHhcCCC------ccccCe
Confidence 11100011 1122 235567787776553322111 233322 121 378999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHH----hcCCCCCC---CEEEEEEeChhHhh
Q 009598 424 FCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTE----GKGRVARG---DRVWQIAFGSGFKC 496 (531)
Q Consensus 424 f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~----~~gri~~G---D~Vl~i~fGsG~~~ 496 (531)
|++||+|+++++.+++.||++++++.+|+.++++||||||+|+++.|+++. ++|++++| |++++++||+||+|
T Consensus 304 ~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~ 383 (401)
T PLN03170 304 WVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTV 383 (401)
T ss_pred EEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhH
Confidence 999999999999999999999999988899999999999999999999987 46888888 89999999999999
Q ss_pred heeeeEEccC
Q 009598 497 NSAVWRALMD 506 (531)
Q Consensus 497 ~s~v~r~~~~ 506 (531)
+++++||...
T Consensus 384 ~~~ll~~~~~ 393 (401)
T PLN03170 384 ETVVLHSVPI 393 (401)
T ss_pred HhHHheeccc
Confidence 9999999554
No 15
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=9e-48 Score=397.92 Aligned_cols=322 Identities=16% Similarity=0.265 Sum_probs=247.6
Q ss_pred CeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHH
Q 009598 123 PVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEVM 202 (531)
Q Consensus 123 ~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la 202 (531)
+++|.++|+|+|+ ++++|+++.+..+. +++ ++.+++||++|+++++++. +.+|+
T Consensus 3 ~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~e~--------------~~~la 56 (326)
T PRK05963 3 SSRIAGFGHAVPD--RRVENAEIEAQLGL----ETG------WIERRTGIRCRRWAAPDET--------------LSDLA 56 (326)
T ss_pred ccEEEEEEEECCC--CeecHHHHHHHcCC----CHH------HhhhccCCeEEEEcCCCCC--------------HHHHH
Confidence 6899999999999 99999999987653 343 6889999999999877643 68999
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSY 281 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~ 281 (531)
.+|+++||+++|++|+|||+||++| ++++..|+.+.+|+++||++ ++.+||+++ ||+|++.||++|.++++++ .++
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~~ 133 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GKP 133 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CCe
Confidence 9999999999999999999999986 57899999999999999998 689999995 9999999999999999987 489
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCcccc
Q 009598 282 AVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIVG 361 (531)
Q Consensus 282 aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~g 361 (531)
||||++|..+. +.++.++. +..+|||||+|+||++++... .. ++.+...++++.|+.+..+.++..
T Consensus 134 aLVv~~d~~s~-~~~~~~~~---~~~lfGDgA~A~ll~~~~~~~----~~---~l~~~~~t~~~~~~~~~~~~gg~~--- 199 (326)
T PRK05963 134 VLVVAANILSR-RINMAERA---SAVLFADAAGAVVLAPSAKAN----SG---VLGSQLISDGSHYDLIKIPAGGSA--- 199 (326)
T ss_pred EEEEEechhhc-cCCccccC---ceEEEeecceEEEEEecCCCC----Cc---eEEEEEEEcCCCCCeEEeCCCCcC---
Confidence 99999999887 34445554 468999999999999866421 12 233445667777776555543210
Q ss_pred cccchhhHHHhhhhhhcccc-ccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHHHHHH
Q 009598 362 VSLSRDLMAVAGDALKTNIT-TLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQKN 440 (531)
Q Consensus 362 ~~lskdl~~v~g~al~~ni~-~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~~ 440 (531)
.+.+.+.. .+ ...+. ..|+. .+.++...+ .+.++..+++ ...-.+|||+|++||+|+++++.+.+.
T Consensus 200 ~~~~~~~~---~~--~~~~~~~~~~~------~~~~~~~~~-~~~~~~~L~~-~gl~~~did~~~~h~~~~~~~~~~~~~ 266 (326)
T PRK05963 200 RPFAPERD---AS--EFLMTMQDGRA------VFTEAVRMM-SGASQNVLAS-AAMTPQDIDRFFPHQANARIVDKVCET 266 (326)
T ss_pred CCCccccc---cc--ccceEecCCHH------HHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHHH
Confidence 01111100 00 00010 01111 111111111 1222222222 111248999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEE
Q 009598 441 LQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRA 503 (531)
Q Consensus 441 Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~ 503 (531)
||++++++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++++++++||
T Consensus 267 l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 267 IGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred cCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 99999998 6899999999999999999999999999999999999999999999999986
No 16
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5.4e-47 Score=396.87 Aligned_cols=336 Identities=17% Similarity=0.205 Sum_probs=247.8
Q ss_pred CCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHH
Q 009598 120 RSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEAD 199 (531)
Q Consensus 120 r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~ 199 (531)
|-++++|.+++.|+|+ ++++++++.+.... ++. ...+|+.+++||++|+++.+++ ++.
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~--~~~~~i~~~~Gi~~R~~~~~~e--------------~~~ 61 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVFS----NDI--KTLKRMKKVIGLNTRYICDENT--------------CVS 61 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhcC----cch--hhhhhhhhccCceEEEeCCCCC--------------CHH
Confidence 4567999999999999 99999975443221 121 1235788999999999987654 379
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCC
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANP 278 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~ 278 (531)
+|+.+|+++||+++|++|+|||+||++| ++++..|+++.+|+++||+++++.+||++ .||+|++.||++|++++++++
T Consensus 62 ~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 62 DLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999996 67999999999999999998889999998 699999999999999999998
Q ss_pred CCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCc
Q 009598 279 NSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQG 358 (531)
Q Consensus 279 ~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G 358 (531)
.+ ||||++|.+|. +.++.|+. ...+|||||+|+||++++... . . ....++++.++.+..+.++..
T Consensus 141 ~~-~LVv~~e~~S~-~~~~~d~~---~~~lFGDGAaA~vl~~~~~~~--~------~--~~~~~~~~~~~~~~~p~g~~~ 205 (353)
T PRK12880 141 GK-ILLICGDTLSK-FIHPKNMN---LAPIFGDGVSATLIEKTDFNE--A------F--FELGSDGKYFDKLIIPKGAMR 205 (353)
T ss_pred CC-EEEEEehhhhc-cCCcccCC---ceeeecccceEEEEEecCCCC--c------e--EEEEecCCCCCeEEecCCCcC
Confidence 88 99999999998 44555654 467999999999999755321 1 1 134567777887776654321
Q ss_pred ccccccch-h-hHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHH
Q 009598 359 IVGVSLSR-D-LMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDE 436 (531)
Q Consensus 359 ~~g~~lsk-d-l~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~ 436 (531)
..+..... + .+......-...+...|+.+ +.+..... .++++..++. ...-.+|||+|++||+|+++++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v------~~~~~~~~-~~~i~~~L~~-~gl~~~did~~v~HQ~~~~i~~~ 277 (353)
T PRK12880 206 IPKADIFNDDSLMQTEEFRQLENLYMDGANI------FNMALECE-PKSFKEILEF-SKVDEKDIAFHLFHQSNAYLVDC 277 (353)
T ss_pred CCccccccccccccccccccCceEEEcCHHH------HHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHH
Confidence 11111100 0 00000000000111122221 12222211 1222222222 11114899999999999999999
Q ss_pred HHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEEccCC
Q 009598 437 IQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRALMDI 507 (531)
Q Consensus 437 v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~~~~~ 507 (531)
+.+.||++++++. ..++++||||||+|+|+.|++..++|+++ +++++||+|++|+++++||.+-+
T Consensus 278 i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~~~ 342 (353)
T PRK12880 278 IKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKDLY 342 (353)
T ss_pred HHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECCcC
Confidence 9999999999982 35689999999999999999999888764 99999999999999999995443
No 17
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.1e-47 Score=377.32 Aligned_cols=346 Identities=24% Similarity=0.282 Sum_probs=281.3
Q ss_pred eEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHH-HcCCCeEEeecCCCcCCCC---CcchhhhhhcHH
Q 009598 124 VYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIAS-RASVGDETYLSRGITSRPP---NICIHEARVEAD 199 (531)
Q Consensus 124 v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~-~sGI~er~~~~~~~~~~~~---~~~l~~~~~ea~ 199 (531)
.+|.+++.++|+ +++++.|+...+.... ..+..+-+.+.+. +.+|.+|+.+.|.+++..+ ...++-+.||+.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~--~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELP--FQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhc--cccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 479999999999 8999988777665432 2222334445555 6788888877666655332 234567899999
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCC
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPN 279 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~ 279 (531)
.++++|.++||+..++.|+|||+||++++++..+||+.++|+++||++++++.+.+.||||+|+..|+..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEeccCCCCCCCCCCc-cccccccccccceEEEEEeeCCC--CcccccceeeeEEEEEecCCCCcccceeeccCC
Q 009598 280 SYAVVVSTENITQNWYSGNDR-SMLLCNCLFRMGGAAVLLSNKAR--DRSRSKYELVHLVRTHKGADDKHFNCVRQAEDD 356 (531)
Q Consensus 280 ~~aLVVstE~~S~~~~~~~dr-~~ll~~~lfgDGAaAvLLs~~~~--~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~ 356 (531)
.+|||||.|.||.++...++. ++++...+||||+||+|++.+.. ++...++.+.+..++ ...|. -+-+-+.-++
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~St-L~~ds--e~~Mgwdv~d 234 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFST-LYPDS--EDIMGWDVGD 234 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccc-cCCcc--ccccceeecC
Confidence 999999999999987665554 58999999999999999998654 222233444443332 22222 2345555566
Q ss_pred CcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHH
Q 009598 357 QGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDE 436 (531)
Q Consensus 357 ~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~ 436 (531)
+| ..+.+|+|+|.+....++.|+++ ++ -...+ ..+||++|+.|+||++||++
T Consensus 235 ~G-~~~vlSrdlp~lIe~~l~~~V~~-----------------fL----~~~~l------s~~dI~~w~~HPGG~KVida 286 (356)
T COG3424 235 QG-LKVVLSRDLPNLIESYLAPNVTT-----------------FL----ATHGL------SIEDIEAWVVHPGGPKVIDA 286 (356)
T ss_pred Cc-EEEEEcCchhHHHHHHhhhhHHH-----------------HH----HHcCC------chhhhceeeeCCCCchHHHH
Confidence 65 45679999999887776666543 11 11122 24899999999999999999
Q ss_pred HHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEEcc
Q 009598 437 IQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRALM 505 (531)
Q Consensus 437 v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~~~ 505 (531)
+++.|||+++.++.|+..|++|||+||+++++.|...++++ .++|.+.++.+||+||+...++++|.+
T Consensus 287 ~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 287 YEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999999999999999999999999986 799999999999999999999999975
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=2.4e-46 Score=395.57 Aligned_cols=332 Identities=19% Similarity=0.279 Sum_probs=244.7
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHH
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEV 201 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~l 201 (531)
.+++|+++|.|+|+ ++++|+++.+.++. +++ +|.+++||++|+++.+++. +.+|
T Consensus 46 ~~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~~------~i~~~tGi~~R~~~~~~~~--------------~~~L 99 (379)
T PLN02326 46 SGSKLVGCGSAVPK--LLITNDDLSKLVDT----SDE------WIATRTGIRNRRVLSGDET--------------LTSL 99 (379)
T ss_pred CCcEEEEEEEECCC--ceecHHHHHHhcCC----chh------heecccCcceEeecCCCCC--------------HHHH
Confidence 46899999999999 99999999987652 333 6899999999999876542 6899
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSY 281 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~ 281 (531)
+.+|+++||+++|++|+|||+||++|+.....++.+..|+++||++ ++.+||++ +||+|++.||++|.+++++++.++
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~ 177 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKN 177 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999998753323446789999999998 89999999 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCcccc
Q 009598 282 AVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIVG 361 (531)
Q Consensus 282 aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~g 361 (531)
||||++|.+|. +.+++|+. ...+|||||+|+||++++... ..+ ..+...+++..++.+..+..+....+
T Consensus 178 vLVv~~e~~s~-~~~~~d~~---~~~lfGDGAaAvlL~~~~~~~----~~i---~~~~~~t~g~~~~~~~~~~~g~~~~~ 246 (379)
T PLN02326 178 VLVIGADALSR-YVDWTDRG---TCILFGDGAGAVVLQACDDDE----DGL---LGFDMHSDGNGHKHLHATFKGEDDDS 246 (379)
T ss_pred EEEEEechhcC-CCCccccC---ceEEEcceeEEEEEEEcCCCC----Cce---EEEEEEEcCCCCCeEEecCCCCcccc
Confidence 99999999887 45556665 346999999999999875421 122 23344556655554433211100000
Q ss_pred cc-cchhhHHHh-hhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHHHHH
Q 009598 362 VS-LSRDLMAVA-GDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQK 439 (531)
Q Consensus 362 ~~-lskdl~~v~-g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~ 439 (531)
.. -..+..... ...-..++...|+.+ +.+....+ .++++..++. ...-.+|||||++||+|+++++.+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v------~~~~~~~~-~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~~ 318 (379)
T PLN02326 247 SGGNTNGVGDFPPKKASYSCIQMNGKEV------FKFAVRCV-PQVIESALQK-AGLTAESIDWLLLHQANQRIIDAVAQ 318 (379)
T ss_pred cccccccccccccccccccceEecCHHH------HHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 00 000000000 000001233333221 11111111 1222222222 11114899999999999999999999
Q ss_pred HcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEE
Q 009598 440 NLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRA 503 (531)
Q Consensus 440 ~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~ 503 (531)
.||++++++ ..++++||||+|+|+|++|++++++|++++||+|++++||+||+|++++|+|
T Consensus 319 ~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 319 RLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 999999999 5789999999999999999999999999999999999999999999999986
No 19
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=2.4e-45 Score=380.27 Aligned_cols=321 Identities=16% Similarity=0.271 Sum_probs=242.4
Q ss_pred CeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHH
Q 009598 123 PVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEVM 202 (531)
Q Consensus 123 ~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la 202 (531)
.++|.++|.|+|+ ++++|+|+.+.++. +++ +|.+++||++|+++++++ .+.+|+
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~--------------~~~~la 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SDH------WISTRTGIKKRHLAPSST--------------SLTKLA 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Chh------hEeeccCeEEEEeCCCCC--------------CHHHHH
Confidence 5799999999999 99999999988763 232 678999999999887654 268999
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSY 281 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~ 281 (531)
.+|++++|+++|++|+|||.||++|+ ++.. +..+..++++||++ ++.+++++ +||++++.||++|.++++++..++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999874 4433 34578899999998 68899999 599999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCcc--
Q 009598 282 AVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGI-- 359 (531)
Q Consensus 282 aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~-- 359 (531)
||||++|.+|. +.+++++. +..+|||||+|+||++.+.. .+.+ ....+|++.++...........
T Consensus 133 ~Lvv~~e~~s~-~~~~~~~~---~~~~fgDga~A~ll~~~~~~------~~~~---~~~~t~g~~~~~~~~~~~~~~~~~ 199 (326)
T CHL00203 133 ILVVGADTLSK-WIDWSDRK---TCILFGDGAGAAIIGASYEN------SILG---FKLCTDGKLNSHLQLMNKPVNNQS 199 (326)
T ss_pred EEEEEehhhhC-cCCcccCC---ceEEEcceeeEEEEEEcCCC------CeEE---EEEEEcCCCcceEEecCCCCCccc
Confidence 99999999987 44556654 46799999999999986542 1222 2334566655543332111000
Q ss_pred cccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHHHHH
Q 009598 360 VGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQK 439 (531)
Q Consensus 360 ~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~ 439 (531)
.+... .+. .. ...+...|+.+ +++..... .++++..++. ...-.+|||||++||+|+++++.+++
T Consensus 200 ~~~~~---~~~---~~-~~~~~~~g~~~------~~~~~~~~-~~~i~~~L~~-~g~~~~did~~~~hq~~~~~~~~~~~ 264 (326)
T CHL00203 200 FGTTK---LPQ---GQ-YQSISMNGKEV------YKFAVFQV-PAVIIKCLNA-LNISIDEVDWFILHQANKRILEAIAN 264 (326)
T ss_pred ccccc---ccc---CC-cceEEECCHHH------HHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 00000 000 00 01122223211 11111111 2223333322 11224899999999999999999999
Q ss_pred HcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEE
Q 009598 440 NLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRA 503 (531)
Q Consensus 440 ~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~ 503 (531)
.||++++++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++|+++|+||
T Consensus 265 ~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 265 RLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred HhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 999999999 6799999999999999999999999999999999999999999999999998
No 20
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=9.4e-45 Score=374.60 Aligned_cols=321 Identities=17% Similarity=0.274 Sum_probs=246.6
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHH
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEV 201 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~l 201 (531)
.+++|.++|.|+|+ ++++++++.+..+. +++ ++.+++||++|+++++++. +.+|
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~~~--------------~~~l 56 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVEEY--------------TSDL 56 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCCCC--------------HHHH
Confidence 46899999999999 99999999987653 333 5889999999999876643 6899
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNS 280 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~ 280 (531)
+.+|++++|+++|++|+|||.||+++ ++++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.++|++++.+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999986 56888999999999999997 68999999 69999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCccc
Q 009598 281 YAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIV 360 (531)
Q Consensus 281 ~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~ 360 (531)
+||||++|.++. +.+..++. ..++|||||+|+||++++.. .+ +..+...++++.++.++.+...
T Consensus 135 ~~Lvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~---- 198 (325)
T PRK12879 135 KVLVIGAERLSK-VTDYTDRT---TCILFGDGAGAVVLEATENE-----PG---FIDYVLGTDGDGGDILYRTGLG---- 198 (325)
T ss_pred EEEEEEehhhcC-cCCccccC---ceEEEeecceEEEEEecCCC-----CC---eEEEEEEEcCCCCCeEEEcCCC----
Confidence 999999999887 33444554 35799999999999987643 12 2334455666666655443211
Q ss_pred ccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHHHHHH
Q 009598 361 GVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQKN 440 (531)
Q Consensus 361 g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~~ 440 (531)
.....+. ......+...|. +.+.+....+ .++++..++. ...-++|||+|++||+|+++++.+.+.
T Consensus 199 -~~~~~~~-----~~~~~~~~~~~~------~~~~~~~~~~-~~~i~~~L~~-~g~~~~did~~~~h~~~~~~~~~~~~~ 264 (325)
T PRK12879 199 -TTMDRDA-----LSGDGYIVQNGR------EVFKWAVRTM-PKGARQVLEK-AGLTKDDIDWVIPHQANLRIIESLCEK 264 (325)
T ss_pred -CCCCccc-----cccCccEEEcCH------HHHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 1110000 000001111111 1111111111 1222222222 111148999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEE
Q 009598 441 LQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRA 503 (531)
Q Consensus 441 Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~ 503 (531)
||++++++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++++++++||
T Consensus 265 lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 265 LGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred cCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 99999998 4689999999999999999999999999999999999999999999999998
No 21
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=8.7e-45 Score=376.08 Aligned_cols=325 Identities=13% Similarity=0.184 Sum_probs=241.5
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHH
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEV 201 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~l 201 (531)
+.++|.+++.|+|+ ++++++++.+..+. +++ ++.+++||++|+++. ++ .+.+|
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~R~~~~-~~--------------~~~~l 55 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PEG------WVLKKSGVKTRHFVD-GE--------------TSSYM 55 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CHh------HhhhccCceEEeecC-CC--------------CHHHH
Confidence 46899999999999 99999999887653 333 688899999999987 43 26899
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCC-CceeEEecCCCchHHHHHHHHHHHHHHcCCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRD-DIKTYNLGGMGCSAGLISIELAKNLLKANPN 279 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~-~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~ 279 (531)
+.+|++++|+++|++|+|||+||+++ ++++..|+++..|+++||+++ ++.+||++ +||++++.||++|.+++++++.
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999986 567778999999999999985 47999999 5999999999999999999999
Q ss_pred CeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCcc
Q 009598 280 SYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGI 359 (531)
Q Consensus 280 ~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~ 359 (531)
++||||++|.++. ..+..++. +..+|||||+|+||++++.. .++. .++..++++.++....+....
T Consensus 135 ~~~Lvv~~e~~s~-~~~~~~~~---~~~lfGDGAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~~~-- 200 (329)
T PRK07204 135 KRVLIISSEISSV-GLNWGQNE---SCILFGDGAAAVVITKGDHS-----SRIL---ASHMETYSSGAHLSEIRGGGT-- 200 (329)
T ss_pred CEEEEEEeccccC-CCCcccCc---ceEEEecccEEEEEEEcCCC-----CcEE---EEEEEEecCCCCceEEecCCc--
Confidence 9999999999886 33334433 35799999999999986542 2333 333344444333222221100
Q ss_pred cccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHHHHH
Q 009598 360 VGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQK 439 (531)
Q Consensus 360 ~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~ 439 (531)
...-+.+. ......+ .+...|+.+ +.+.... -+++++..+++ ...-.+|||+|++||+|+.+++.+++
T Consensus 201 -~~~~~~~~-~~~~~~~--~~~~~~~~~------~~~~~~~-~~~~i~~~L~~-~gl~~~did~~~~H~~~~~~~~~i~~ 268 (329)
T PRK07204 201 -MIHPREYS-EERKEDF--LFDMNGRAI------FKLSSKY-LMKFIDKLLMD-AGYTLADIDLIVPHQASGPAMRLIRK 268 (329)
T ss_pred -CCCCcccc-cccccCc--eEEECCHHH------HHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHH
Confidence 00000000 0000000 011111111 0011111 12333333322 12224899999999999999999999
Q ss_pred HcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEE
Q 009598 440 NLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRA 503 (531)
Q Consensus 440 ~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~ 503 (531)
.|+++++++ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++++++
T Consensus 269 ~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 269 KLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 999999998 6899999999999999999999999999999999999999999999999985
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=8e-45 Score=377.49 Aligned_cols=321 Identities=17% Similarity=0.209 Sum_probs=242.1
Q ss_pred CCCCeEEEEEeEecCCCCceecHHHHHHHhhccC---CCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhh
Q 009598 120 RSSPVYLVDFSCYKPADERKMSMEAFLKMSEESS---FFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARV 196 (531)
Q Consensus 120 r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~---~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ 196 (531)
|.++++|.+++.|+|+ ++++++++.+.+.... ..++ +++.+++||++|++.++++
T Consensus 2 ~~~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~~-------------- 59 (338)
T PRK09258 2 KYSNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEGT-------------- 59 (338)
T ss_pred cccceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCCC--------------
Confidence 3467999999999999 9999999998754311 1122 2577889999999976543
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
...+|+.+|+++||+++|++++|||.||+++ ++++..|+++.+|++++|+++++.+||+++ ||+|++.||++|.++++
T Consensus 60 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~ 138 (338)
T PRK09258 60 QLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIE 138 (338)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHH
Confidence 2689999999999999999999999999986 578889999999999999987799999995 99999999999999999
Q ss_pred cCCCCeEEEEEeccCCCCCCCCC------Ccc------ccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCC
Q 009598 276 ANPNSYAVVVSTENITQNWYSGN------DRS------MLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGAD 343 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~~~~~~~------dr~------~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d 343 (531)
+++.++||||++|.++.. +++. +.. ..+...+|||||+|+||++++... ..+++... ...++
T Consensus 139 ~g~~~~~Lvv~~e~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~~---~~~~~ 212 (338)
T PRK09258 139 LGQIDYALVVSGESAREI-VEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLGG---VTRAA 212 (338)
T ss_pred cCCCCEEEEEEecccchh-ccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeeee---eeecC
Confidence 999999999999998873 2211 111 112357899999999999865421 12344332 22334
Q ss_pred CCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccE
Q 009598 344 DKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEH 423 (531)
Q Consensus 344 ~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~ 423 (531)
++.++.+... ...+..+.+.+.. ...... .++++..++. ...-.+|||+
T Consensus 213 ~~~~~~~~~~-------~~~~~~~~~~~~~----------------------~~~~~~-~~~~~~~L~~-~g~~~~did~ 261 (338)
T PRK09258 213 TEHHELCQGG-------RDGMRTDAVGLLK----------------------EGVELA-VDTWEAFLAQ-LGWAVEQVDR 261 (338)
T ss_pred CCcccccccC-------ccceEEcHHHHHH----------------------HHHHHH-HHHHHHHHHH-cCCCHHHCCE
Confidence 4433311110 0111222221111 111111 1222222221 1111479999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEE
Q 009598 424 FCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRA 503 (531)
Q Consensus 424 f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~ 503 (531)
|++||+|+++++.+++.||++++++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 262 ~i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 262 VICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred EecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 9999999999999999999999999 5789999999999999999999999999999999999999999999999986
No 23
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=2.1e-43 Score=367.31 Aligned_cols=331 Identities=16% Similarity=0.191 Sum_probs=244.1
Q ss_pred CCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHH
Q 009598 121 SSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADE 200 (531)
Q Consensus 121 ~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~ 200 (531)
|++++|.+++.|+|+ ++++++++.+..+. +++ ++.+++||++|+++++++. ..+
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~~~--------------~~~ 55 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPEDH--------------TSD 55 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCCCC--------------HHH
Confidence 568999999999999 89999999887663 343 5778999999999876543 689
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEee--cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc-C
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVNC--SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA-N 277 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~s--s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~-~ 277 (531)
|+.+|++++|+++|++|+|||.||+++ .+++..|+.+.+|++++|++ ++.+|+++ +||++++.||++|.+++++ +
T Consensus 56 la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g 133 (339)
T PRK06840 56 MAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDP 133 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999764 35778999999999999997 78999999 5999999999999999999 6
Q ss_pred CCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCC
Q 009598 278 PNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQ 357 (531)
Q Consensus 278 ~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~ 357 (531)
..+++|||++|..+. +.+..++... ....|||||+|+||++++.. .+++ .+...+|++.++.+..+.++.
T Consensus 134 ~~~~~Lvv~~~~~s~-~~~~~~~~~~-~~~~~GDgAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~g~ 203 (339)
T PRK06840 134 SIENVLLVGGYRNSD-LVDYDNPRTR-FMFNFAAGGSAALLKKDAGK-----NRIL---GSAIITDGSFSEDVRVPAGGT 203 (339)
T ss_pred CccEEEEEeeccccc-ccCcCCCCee-eeccCCCceeEEEEEecCCC-----CceE---EEEEEEcCCccceEEecCCCc
Confidence 678999999999877 3333333210 01248999999999986542 3333 344566777776655443321
Q ss_pred cccccccchhhHHHhhhhhhccccccCCCccchhhhhH-HHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHH
Q 009598 358 GIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFR-FFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDE 436 (531)
Q Consensus 358 G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~-~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~ 436 (531)
. .+.+.+.... + +..+...++..+ ...+. ..... ..++++..++. ...-.+|||+|++||+|+++++.
T Consensus 204 ~---~~~~~~~~~~-~---~~~~~~~~~~~~--~~~~~~~~~~~-~~~~i~~~L~~-~gl~~~did~~~~h~~~~~~~~~ 272 (339)
T PRK06840 204 K---QPASPETVEN-R---QHYLDVIDPESM--KERLDEVSIPN-FLKVIREALRK-SGYTPKDIDYLAILHMKRSAHIA 272 (339)
T ss_pred C---CCCccccccc-c---cceEEEcCcHHH--HHHhHhhHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCcCHHHHHH
Confidence 1 1111110000 0 000111111110 00000 00000 12222222222 11124899999999999999999
Q ss_pred HHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEEc
Q 009598 437 IQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRAL 504 (531)
Q Consensus 437 v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~~ 504 (531)
+++.||++++++ . ++++||||+|+|++++|++++++|++++||++++++||+|++|+++++||.
T Consensus 273 ~~~~Lgl~~~~~---~-~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 273 LLEGLGLTEEQA---I-YLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHcCCCHHHe---E-eHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 999999999997 2 689999999999999999999999999999999999999999999999994
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=1.5e-43 Score=364.10 Aligned_cols=319 Identities=19% Similarity=0.335 Sum_probs=245.6
Q ss_pred CeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHH
Q 009598 123 PVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEVM 202 (531)
Q Consensus 123 ~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la 202 (531)
+++|.++++|+|+ ++++++++.+..+. +++ ++.+++||++|+++++++ .+.+|+
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~~------~~~~~~Gi~~r~~~~~~~--------------~~~~la 54 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SDE------WIRTRTGIRERRIADPGE--------------TTSDLA 54 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CHH------HhhhccCceEEeeCCCCC--------------CHHHHH
Confidence 5799999999999 89999999998753 333 678899999999998754 368999
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSY 281 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~ 281 (531)
.+|++++|+++|++++|||.||+++ ++++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.+++++++.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999886 46777899999999999998 79999999 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCcccc
Q 009598 282 AVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIVG 361 (531)
Q Consensus 282 aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~g 361 (531)
||||++|.++.. .+.+++. ...+|||||+|+||++++.. .++. .++..++++.++.+..+.++...
T Consensus 133 vLvv~~e~~s~~-~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i~---~~~~~~~~~~~~~~~~~~~~~~~-- 198 (320)
T cd00830 133 VLVVGAETLSRI-LDWTDRS---TAVLFGDGAGAVVLEATEED-----PGIL---DSVLGSDGSGADLLTIPAGGSRS-- 198 (320)
T ss_pred EEEEEehhhccc-cCcccCC---ceEEEeccceEEEEEecCCC-----CcEE---EEEEEEcCCCCCeEEeCCCCcCC--
Confidence 999999998873 3334443 46899999999999987642 3333 34445677777766655432110
Q ss_pred cccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHHHHHHc
Q 009598 362 VSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQKNL 441 (531)
Q Consensus 362 ~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~~L 441 (531)
+. +.. ..-...+...++.+. ..+... .+++++..++. ...-++|||+|++||+|+++++.+++.|
T Consensus 199 -~~--~~~----~~~~~~~~~~~~~~~------~~~~~~-~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~l 263 (320)
T cd00830 199 -PF--EDA----EGGDPYLVMDGREVF------KFAVRL-MPESIEEALEK-AGLTPDDIDWFVPHQANLRIIEAVAKRL 263 (320)
T ss_pred -cc--ccc----cccCccEEEcChHHH------HHHHHh-hHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHh
Confidence 00 000 000001111122110 011111 12233222222 1112489999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeee
Q 009598 442 QLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVW 501 (531)
Q Consensus 442 gl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~ 501 (531)
|++++++ ..++++|||++|+|++++|++++++|++++||+|++++||+|++|+++++
T Consensus 264 gl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 264 GLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred CCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 9999998 57999999999999999999999999999999999999999999999874
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=2.8e-43 Score=362.82 Aligned_cols=316 Identities=22% Similarity=0.338 Sum_probs=246.1
Q ss_pred CeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHH
Q 009598 123 PVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEVM 202 (531)
Q Consensus 123 ~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la 202 (531)
.++|.++++|+|+ ++++++++.+..+. +++ ++.+++|+++|++..+++. +.+|+
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~--------------~~~la 55 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SDE------WIVTRTGIKERRIAADDET--------------SSTMG 55 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----chH------HeecccCceEEEECCCCCC--------------HHHHH
Confidence 4899999999999 99999999987663 332 5788999999998876643 68999
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSY 281 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~ 281 (531)
.+|++++|+++|++|+|||.+|+++ ++++..|+.+.++++++|++ ++.+|+++ +||++++.||++|.++++++..++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999986 56778899999999999998 68999998 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCcccc
Q 009598 282 AVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIVG 361 (531)
Q Consensus 282 aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~g 361 (531)
+|||++|..+. +.++.++. ...+|||||+|+||++++... + ++.+...++++.++.+..+.++...
T Consensus 134 ~Lvv~~e~~~~-~~~~~~~~---~~~~~GDGAaA~lL~~~~~~~-----~---i~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (318)
T TIGR00747 134 VLVVGAEKLSS-TLDWTDRG---TCVLFGDGAGAVVLGESEDPG-----G---IISTHLGADGTQGEALYLPAGGRPT-- 199 (318)
T ss_pred EEEEEehhhcC-cCCcCCCC---eEEEEecceeEEEEeecCCCC-----c---EEEEEEEEcCCCcceEEECCCCcCC--
Confidence 99999999876 33444554 346899999999999876431 2 3344555677777766655432110
Q ss_pred cccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHHHHHHc
Q 009598 362 VSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQKNL 441 (531)
Q Consensus 362 ~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~~L 441 (531)
..+ ...+...|+.+ ++.+.... .++++..++. ...-.+||+||++||+++++++.+++.|
T Consensus 200 --~~~----------~~~~~~~~~~~------~~~~~~~~-~~~~~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~l 259 (318)
T TIGR00747 200 --SGP----------SPFITMEGNEV------FKHAVRKM-GDVVEETLEA-NGLDPEDIDWFVPHQANLRIIEALAKRL 259 (318)
T ss_pred --CCC----------CCceEECCHHH------HHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHc
Confidence 000 00011111111 11111111 1222222221 1111479999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEE
Q 009598 442 QLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRA 503 (531)
Q Consensus 442 gl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~ 503 (531)
|++++++ ..++++||||+|+|+++.|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 260 gi~~~k~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 260 ELDMSQV---VKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred CCCHHHe---eehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 9999999 4789999999999999999999999999999999999999999999999986
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-41 Score=350.69 Aligned_cols=316 Identities=21% Similarity=0.324 Sum_probs=243.9
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHH
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEV 201 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~l 201 (531)
..|+|.++++|+|+ ++++++++.+..+. +++ +|.+++|+++|+++.+++ ...+|
T Consensus 2 ~~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~--------------~~~~l 55 (319)
T PRK09352 2 MYAKILGTGSYLPE--RVVTNDDLEKMVDT----SDE------WIVTRTGIKERRIAAPDE--------------TTSDL 55 (319)
T ss_pred CceEEEEEEEECCC--eEEcHHHHHHHcCC----CHH------HhhhhcCeEEEEeCCCCC--------------CHHHH
Confidence 46899999999999 99999999988663 332 678899999998876554 26899
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNS 280 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~ 280 (531)
+.+|++++|+++|++++|||.+|+++ +++...|+.+..|+.++|++ ++.+++++ ++|++++.||.+|.++++++..+
T Consensus 56 a~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~~ 133 (319)
T PRK09352 56 ATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAYK 133 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999886 45677899999999999995 78999999 69999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCccc
Q 009598 281 YAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIV 360 (531)
Q Consensus 281 ~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~ 360 (531)
+|||+++|.++. ++...++. ...+|||||+|+||++++.. ++ ..++..++++.++.+..+.++...
T Consensus 134 ~vLvv~~e~~s~-~~~~~~~~---~~~~~gDGaaA~ll~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~- 199 (319)
T PRK09352 134 NVLVIGAEKLSR-IVDWTDRS---TCVLFGDGAGAVVLGASEEP------GI---LSTHLGSDGSYGDLLYLPGGGSRG- 199 (319)
T ss_pred EEEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEEcCCC------Ce---EEEEEEEcCCCCCeEEeCCCCCCC-
Confidence 999999999887 33444444 34799999999999987642 22 233445566655544444322100
Q ss_pred ccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHHHHHH
Q 009598 361 GVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQKN 440 (531)
Q Consensus 361 g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~~ 440 (531)
+.+ ...+...|.. .++++...+ .++++..+++ ..--.+||+||++|++|+.+++.+++.
T Consensus 200 --~~~-----------~~~~~~~~~~------~~~~~~~~~-~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~ 258 (319)
T PRK09352 200 --PAS-----------PGYLRMEGRE------VFKFAVREL-AKVAREALEA-AGLTPEDIDWLVPHQANLRIIDATAKK 258 (319)
T ss_pred --CCC-----------CCceEECCHH------HHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 000 0011111110 011111111 2233333322 111147999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEE
Q 009598 441 LQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRA 503 (531)
Q Consensus 441 Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~ 503 (531)
||++++++ ..++++|||++++|++++|++++++|++++||++++++||+|++|+++++||
T Consensus 259 lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~ 318 (319)
T PRK09352 259 LGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318 (319)
T ss_pred hCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 99999998 5789999999999999999999999999999999999999999999999997
No 27
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-42 Score=359.90 Aligned_cols=310 Identities=18% Similarity=0.259 Sum_probs=233.9
Q ss_pred CeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHH
Q 009598 123 PVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEVM 202 (531)
Q Consensus 123 ~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la 202 (531)
.++|.+++.|+|+ ++++|+++.+..+. +++ ||.+++||.+|+++++++. +.+|+
T Consensus 2 ~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~~------~i~~~~Gi~~R~~~~~~~~--------------~~~la 55 (347)
T PRK04262 2 MVGIVGYGAYIPR--YRIKVEEIARVWGD----DPE------AIKRGLGVEEKSVPGPDED--------------TATIA 55 (347)
T ss_pred ceeEEEEEEeCCC--EEecHHHHHHHhCc----CHH------HHhhccCeeeeecCCCCcC--------------HHHHH
Confidence 5899999999999 99999999988763 444 7899999999999876643 68999
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSY 281 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~ 281 (531)
.+|+++||+++|++|+|||.||+++ ++++..|+.+.+|++++|+++++.++|++ +||+|++.||.+|.+++++++.++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999886 56788899999999999998678999998 599999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCC-ccc
Q 009598 282 AVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQ-GIV 360 (531)
Q Consensus 282 aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~-G~~ 360 (531)
||||++|.... .+.++. ...|||||+|+||++++. ..++.+.... .+|. .+.+. ..+.. ...
T Consensus 135 aLVv~~e~~~~---~~~~~~----~~~~GDGA~A~ll~~~~~-----~~~i~~~~~~--~~d~--~d~~~-~~~~~~~~~ 197 (347)
T PRK04262 135 ALAIGADTAQG---APGDAL----EYTAAAGGAAFIIGKEEV-----IAEIEATYSY--TTDT--PDFWR-REGEPYPRH 197 (347)
T ss_pred EEEEEEeeecc---CCCCCC----CCcCCCCcEEEEEecCcc-----cceeeccccc--cccc--hhhcC-CCCCcCCCc
Confidence 99999998422 223332 246899999999997432 2333332111 1221 11111 10000 000
Q ss_pred ccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHHHHHHHHH
Q 009598 361 GVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQKN 440 (531)
Q Consensus 361 g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~~ 440 (531)
+..++++ | .++... .++++..++. ...-.+|||+|++||+|+++++.+++.
T Consensus 198 ~~~~~~~-----------------~----------~~~~~~-~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~~~ 248 (347)
T PRK04262 198 GGRFTGE-----------------P----------AYFKHI-ISAAKGLMEK-LGLKPSDYDYAVFHQPNGKFPLRVAKM 248 (347)
T ss_pred Cceecch-----------------H----------HHHHHH-HHHHHHHHHH-hCcCHHHhceeecCCCchHHHHHHHHH
Confidence 0000000 0 001111 1222222221 111148999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEEccCCC
Q 009598 441 LQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRALMDIP 508 (531)
Q Consensus 441 Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~~~~~~ 508 (531)
||++++++..+. ++++||||||+|+|++|+++++ ++++||+|++++||+|+++.+++|++.+...
T Consensus 249 Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 249 LGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred cCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 999999996433 6899999999999999999987 4899999999999999999999999987654
No 28
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.8e-41 Score=356.88 Aligned_cols=347 Identities=17% Similarity=0.189 Sum_probs=238.5
Q ss_pred CeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHH
Q 009598 123 PVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEVM 202 (531)
Q Consensus 123 ~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la 202 (531)
+++|.++|+|+|+ ++++|+++.+.++......+ ...+||++++||++|+++.++.- .+ .+...+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~--~~-------~~~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEG--RP-------THSNAQMA 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCC--CC-------CCCHHHHH
Confidence 5899999999999 89999999987764321111 12258999999999999754321 00 11368999
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSY 281 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~ 281 (531)
.+|+++||+++|++|+|||.||++| ++++..|+.+..|+++||++ ++.+++++ ++|+|++.||++|.+++++++.++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999986 56788999999999999998 58899998 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCC------------c--cc----cccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCC
Q 009598 282 AVVVSTENITQNWYSGND------------R--SM----LLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGAD 343 (531)
Q Consensus 282 aLVVstE~~S~~~~~~~d------------r--~~----ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d 343 (531)
||||++|.+|..+ ++++ + .. -..+++|||||+|+||++.+... ...+ ++...+..++
T Consensus 146 vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~ 220 (378)
T PRK06816 146 AVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSY 220 (378)
T ss_pred EEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeecc
Confidence 9999999998743 2111 1 00 00135799999999999866421 1111 1111122233
Q ss_pred CCcccceeeccCCC---c-ccccc-cchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCcccccc
Q 009598 344 DKHFNCVRQAEDDQ---G-IVGVS-LSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFK 418 (531)
Q Consensus 344 ~~~~~~v~~~ed~~---G-~~g~~-lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~ 418 (531)
...+..++...... + ..++. ...+-+...+. ..+...+..+ ..++... ..++++..+++ ...-.
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~~~-~~~~i~~~L~~-~gl~~ 289 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASA---LSLKQDVRLL------NENIVVY-TIKPLLELVDK-RNLDP 289 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhccC---chHHhHHHHH------HHHhHHH-HHHHHHHHHHH-cCCCh
Confidence 22232222211100 0 00010 01110000000 0000000000 0011110 01222222221 11124
Q ss_pred ccccEEEEcCCCHHHHHHHHHHc-----CCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChh
Q 009598 419 LAFEHFCIHSGGRAVLDEIQKNL-----QLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSG 493 (531)
Q Consensus 419 ~did~f~~Hq~g~~vi~~v~~~L-----gl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG 493 (531)
+|||+|++||+|.++++.+.+.| |++++++ ..++++||||+|||+|++|++++++|++++||+|++++.|+|
T Consensus 290 ~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 290 DDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred hhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEeccc
Confidence 89999999999999999999987 8999998 689999999999999999999999999999999999987777
Q ss_pred -HhhheeeeEEc
Q 009598 494 -FKCNSAVWRAL 504 (531)
Q Consensus 494 -~~~~s~v~r~~ 504 (531)
+.++.+++.|+
T Consensus 367 ~~~~~~~~~~~~ 378 (378)
T PRK06816 367 RFSTAFMLLTVV 378 (378)
T ss_pred chhheeEEEEEC
Confidence 99999999874
No 29
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=3.3e-41 Score=352.27 Aligned_cols=314 Identities=17% Similarity=0.235 Sum_probs=234.8
Q ss_pred eEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHHH
Q 009598 124 VYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEVMF 203 (531)
Q Consensus 124 v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la~ 203 (531)
++|.++|+|+|+ ++++|+++.+..+. +++ ++.+++||++|+++++++. +.+|+.
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~------~i~~~~Gi~~r~v~~~~~~--------------~~~la~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPE------SISNGLPVEEKAVPGLDED--------------TATIGV 55 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHh------HeeeccceeeeecCCCCCC--------------HHHHHH
Confidence 679999999999 99999999887653 444 6888999999999877653 689999
Q ss_pred HHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeE
Q 009598 204 GALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYA 282 (531)
Q Consensus 204 ~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~a 282 (531)
+|+++||+++|++|+|||.||+++ ++++..|+.+..|++++|+++++.+||++ .||+|++.||++|.++++++..++|
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~-~aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLE-FACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999886 56778899999999999998789999999 4999999999999999999999999
Q ss_pred EEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCC-cccceeeccCCCcccc
Q 009598 283 VVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDK-HFNCVRQAEDDQGIVG 361 (531)
Q Consensus 283 LVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~-~~~~v~~~ed~~G~~g 361 (531)
|||++|..+.. +.|+. ...|||||+|+||++.+.. .++.+.. ...+|+. .++ ..+
T Consensus 135 LVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~~~~~----~~~------ 190 (345)
T TIGR00748 135 LAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTPDFWR----REG------ 190 (345)
T ss_pred EEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceecccccccc----cCC------
Confidence 99999997642 23332 3568999999999965421 1222211 1112211 111 000
Q ss_pred cccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHh-hccCccccccccccEEEEcCCCHHHHHHHHHH
Q 009598 362 VSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKA-KVKPYIPDFKLAFEHFCIHSGGRAVLDEIQKN 440 (531)
Q Consensus 362 ~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~~ 440 (531)
... +...++ ..+. .+-++++...+ +++++. .+. .+|||+|++||+|+++++.+.+.
T Consensus 191 ~~~----~~~~~~-------~~~~-----~~~~~~~~~~~-~~~L~~~gl~------~~did~~i~Hq~~~~~~~~~~~~ 247 (345)
T TIGR00748 191 EPY----PRHGGR-------FTGE-----PAYFHHVVTAA-KGLMEKLGLT------PEDFDYAVFHQPNGKFYLVAARM 247 (345)
T ss_pred CcC----CCcCCe-------ecCh-----HHHHHHHHHHH-HHHHHHcCCC------HHHcCEEEeCCCChHHHHHHHHH
Confidence 000 000000 0000 00111121111 333332 222 47999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEEccCCCCCCCCCCCcc
Q 009598 441 LQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRALMDIPVGNWRGNAWV 518 (531)
Q Consensus 441 Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~~~~~~~~~~~~~~w~ 518 (531)
||++++++..+ .+.++||||+|+|+|+.|+++++ ++++||+|++++||+|++|++++|+|.+.... ..+|.
T Consensus 248 lgl~~ek~~~~-~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~----~~~~~ 318 (345)
T TIGR00748 248 LGFPKEQVKPG-LLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEE----KRDLA 318 (345)
T ss_pred cCCCHHHeecc-ccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHH----Hhhhh
Confidence 99999998421 13489999999999999999986 68999999999999999999999999876652 34675
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.6e-40 Score=345.63 Aligned_cols=349 Identities=17% Similarity=0.222 Sum_probs=236.5
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhcc-CCCCHHh---H----------HHHHHHHHHcCCCeEEeecCCC----c
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEES-SFFQEES---L----------QFQKRIASRASVGDETYLSRGI----T 183 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~-~~~~~~~---~----------~f~~ki~~~sGI~er~~~~~~~----~ 183 (531)
++++|+++|+|+|+ ++++|+++.+.++.. .++.++. . ...++|.+++||++|+++.++. .
T Consensus 1 ~~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~ 78 (372)
T PRK07515 1 HNVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPD 78 (372)
T ss_pred CCcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCccc
Confidence 36899999999999 899999999875321 1111000 0 0135788999999999985421 1
Q ss_pred CCCCC--cchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCc
Q 009598 184 SRPPN--ICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGC 260 (531)
Q Consensus 184 ~~~~~--~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gC 260 (531)
..++. .+.......+.+|+.+|+++||+++|++++|||.||++|+ +++..|+.+.+|+++||++ ..+++++ ++|
T Consensus 79 ~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aC 155 (372)
T PRK07515 79 RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VAC 155 (372)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chh
Confidence 00110 0111111245789999999999999999999999998874 6788999999999999996 5789999 699
Q ss_pred hHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEe
Q 009598 261 SAGLISIELAKNLLKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHK 340 (531)
Q Consensus 261 sg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~ 340 (531)
++++.||.+|.++++++..++||||++|.++.. .+..|+. +..+|||||+|+||++.+....+..+++.+.. .
T Consensus 156 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-~~~~d~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~---~ 228 (372)
T PRK07515 156 SSATFGIQTAANAIRSGSARRVLVVNPEICSGH-LNFRDRD---SHFIFGDVATAVIVERADTATSAGGFEILGTR---L 228 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeeeccccc-ccccCCC---CCEEecCccEEEEEeeccccccCCCceEEEEE---e
Confidence 999999999999999999999999999998863 3445654 46899999999999986543222345554432 1
Q ss_pred cCCCCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCcccccccc
Q 009598 341 GADDKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLA 420 (531)
Q Consensus 341 ~~d~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~d 420 (531)
.++ ..+.+..+ . |. +.....+-+.. ....+...|..+ ++++.... .++++..++. ...-.+|
T Consensus 229 ~~~--~~~~~~~~-~--G~-~~~~~~~~~~~----~~~~~~~~g~~~------~~~~~~~~-~~~i~~~L~~-~gl~~~d 290 (372)
T PRK07515 229 FTQ--FSNNIRNN-F--GF-LNRADPEGIGA----RDKLFVQEGRKV------FKEVCPMV-AEHIVEHLAE-NGLTPAD 290 (372)
T ss_pred ecc--cccceecC-C--CC-CCCCCcccccc----ccceEEeccHHH------HHHHHHHH-HHHHHHHHHH-cCCCHHH
Confidence 121 11221111 0 10 00000000000 000111122211 11111111 1223333322 1112489
Q ss_pred ccEEEEcCCCHHHHHHHHHH-cCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhhee
Q 009598 421 FEHFCIHSGGRAVLDEIQKN-LQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSA 499 (531)
Q Consensus 421 id~f~~Hq~g~~vi~~v~~~-Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~ 499 (531)
||+|++||+|.++++.+.+. ||++.+. +.++.++++||||+|+|+|++|+++. +++++||+|++++||+|++|+++
T Consensus 291 Id~~~~Hq~~~~~~d~~~~~llg~~~~~-~~~~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~~~ 367 (372)
T PRK07515 291 VKRFWLHQANINMNQLIGKKVLGRDATP-EEAPVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIGSV 367 (372)
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCCCh-hhceEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHHHH
Confidence 99999999999999999988 6754432 22368999999999999999999885 57899999999999999999999
Q ss_pred eeEE
Q 009598 500 VWRA 503 (531)
Q Consensus 500 v~r~ 503 (531)
++|.
T Consensus 368 ll~~ 371 (372)
T PRK07515 368 IVRK 371 (372)
T ss_pred Hhcc
Confidence 9874
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=7.2e-39 Score=329.94 Aligned_cols=321 Identities=20% Similarity=0.259 Sum_probs=236.1
Q ss_pred CeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHH
Q 009598 123 PVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEVM 202 (531)
Q Consensus 123 ~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la 202 (531)
.++|.++++|+|+ ++++++++.+..+. + ++.+++||++|++..+++ ...+|+
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~--------------~~~~l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDE--------------DVPTMA 52 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCC--------------CHHHHH
Confidence 4789999999999 99999999887663 1 467789999999986543 268999
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSY 281 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~ 281 (531)
.+|++++|+++|++++|||.||++++ ++...|+.+.+|++++|++ ++.+++++ +||++++.||.+|.++++++..++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999864 5566899999999999998 89999999 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCcccc
Q 009598 282 AVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIVG 361 (531)
Q Consensus 282 aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~g 361 (531)
||||++|.++.... ..++ ..++|||||+|+||++.+.. ..+++.. ++..+++..+++. .+. .+
T Consensus 131 vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~---~~~~i~~---~~~~~~~~~~~~~-~~~-----~~ 193 (324)
T cd00827 131 ALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGI---LAAGIVS---THSTSDPGYDFSP-YPV-----MD 193 (324)
T ss_pred EEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCccc---ccCCcee---eeeecccccccCc-cce-----ec
Confidence 99999999887432 1122 46899999999999987642 1233433 3444555433210 000 00
Q ss_pred cccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCH-HHHHHHHHH
Q 009598 362 VSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGR-AVLDEIQKN 440 (531)
Q Consensus 362 ~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~-~vi~~v~~~ 440 (531)
.......-..... .+...+.. .+-..+....+ .++++..+.+.--+ +||++|++||+|+ .+++.+++.
T Consensus 194 ~~~~~~~~~~~~~----~~~~~~~~----~~~~~~~~~~~-~~~~~~~l~~~~~~--~~i~~~~~h~~~~~~~~~~~~~~ 262 (324)
T cd00827 194 GGYPKPCKLAYAI----RLTAEPAG----RAVFEAAHKLI-AKVVRKALDRAGLS--EDIDYFVPHQPNGKKILEAVAKK 262 (324)
T ss_pred cCCCcchhhhhhc----ceeecCCc----cchHHHHhHHH-HHHHHHHHHHcccc--cccceeeccCchHHHHHHHHHHH
Confidence 0000000000000 01100000 00001111111 23333333321111 6899999999999 999999999
Q ss_pred cCCCccccccccc-ccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeee
Q 009598 441 LQLRDWHMEPSRM-TLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVW 501 (531)
Q Consensus 441 Lgl~~e~~e~S~~-~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~ 501 (531)
|+++++++.+++. ++++||||+|+|+++.|+++++++++++||+|++++||+|++++++++
T Consensus 263 l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 263 LGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred ccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 9999999976554 899999999999999999999999999999999999999999998864
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=4.2e-35 Score=309.94 Aligned_cols=308 Identities=14% Similarity=0.175 Sum_probs=223.1
Q ss_pred eEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHHH
Q 009598 124 VYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEVMF 203 (531)
Q Consensus 124 v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la~ 203 (531)
|+|.+++.|+|+ ++++++++.+..+. +++ |+....|++++++.++++ ++.+|+.
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~~------~~~~g~G~~~~~~~~~~e--------------d~~~la~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DPE------KFHIGIGQKKMAVPPIDE--------------DIVTMAA 54 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CHH------HHHhhcCceEEeeCCCCC--------------CHHHHHH
Confidence 589999999999 99999999987663 554 788899999999877664 3689999
Q ss_pred HHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeE
Q 009598 204 GALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYA 282 (531)
Q Consensus 204 ~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~a 282 (531)
+|++++|+++ +|+|||+||++| ++++..|+.+..|+++||+++++.++|+. ++|+|++.||.+|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999986 67788899999999999998889999999 5999999999999999999999999
Q ss_pred EEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEE-EEEecCCCCcccceeeccCCCcccc
Q 009598 283 VVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLV-RTHKGADDKHFNCVRQAEDDQGIVG 361 (531)
Q Consensus 283 LVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v-~t~~~~d~~~~~~v~~~ed~~G~~g 361 (531)
|||++|+... .. .+ . ...+|||||+|+||+.++. +..+. .+...+++. ++. +.+.+.
T Consensus 132 LVv~~D~a~~--~~-~~-~---~~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~df-~~p~~~----- 189 (379)
T TIGR01835 132 LVIASDIAKY--GL-ES-P---GEPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MDF-WRPNYS----- 189 (379)
T ss_pred EEEEeehhhc--cc-CC-C---CCccccCccEEEEEecCCC--------eeEEeccceeeecCC-CCc-cCCCCC-----
Confidence 9999998433 11 11 1 2468999999999997542 11111 111112221 211 112110
Q ss_pred cccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHH----HHHH
Q 009598 362 VSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAV----LDEI 437 (531)
Q Consensus 362 ~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~v----i~~v 437 (531)
+-+.+.+ +. + ...|+..+ .++++..++. ...-.+|||+||+||++.++ ++.+
T Consensus 190 -----~~~~v~g-----------~~----s--~~~y~~~~-~~~~~~~l~~-~g~~~~did~~i~H~p~~~~~~k~~~~~ 245 (379)
T TIGR01835 190 -----TTALVDG-----------QY----S--NEQYLNAF-ENAWNDYAKR-TGLSLADFAAFCFHVPFTKMGLKALRHI 245 (379)
T ss_pred -----CceeECc-----------HH----H--HHHHHHHH-HHHHHHHHHH-hCCCHHHcCEEEECCCCCcHHHHHHHHH
Confidence 0011111 10 0 01122211 2233322222 12224899999999997776 3445
Q ss_pred HHHcCCCc-----ccccccccccccccccccchHHHHHHHHHhcC-CCCCCCEEEEEEeChhHhhheeeeEEccC
Q 009598 438 QKNLQLRD-----WHMEPSRMTLHRFGNTSSSSLWYELAYTEGKG-RVARGDRVWQIAFGSGFKCNSAVWRALMD 506 (531)
Q Consensus 438 ~~~Lgl~~-----e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~g-ri~~GD~Vl~i~fGsG~~~~s~v~r~~~~ 506 (531)
.+.+++++ +.+++|+.+++++|||+|+|+++.|+.+++.+ ++++||+|+|++||+|+.......+..+.
T Consensus 246 l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~~ 320 (379)
T TIGR01835 246 LKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVAG 320 (379)
T ss_pred HhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEccc
Confidence 66677773 23345667899999999999999999999885 89999999999999998777776666543
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=2.2e-33 Score=300.68 Aligned_cols=312 Identities=15% Similarity=0.217 Sum_probs=222.4
Q ss_pred CCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEee--cCCCcCCCCCcchhhhhhc
Q 009598 120 RSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYL--SRGITSRPPNICIHEARVE 197 (531)
Q Consensus 120 r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~--~~~~~~~~~~~~l~~~~~e 197 (531)
+|++++|.++|.|+|+ ++|+++++.+..+. +++ |+ ++||++|+++ ++++ +
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~------~~--~~GI~~r~~ava~~~E--------------d 52 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SKG------KY--TIGLGQDCMAFCTDVE--------------D 52 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHH------HH--hhccceeEeccCCCCC--------------C
Confidence 4789999999999999 99999999988764 565 44 5899999874 3433 4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHH---HHcCCCCCceeEEecCCCchHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIV---NHYKLRDDIKTYNLGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~---~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~l 273 (531)
+.+|+.+|++++|+++|++|++||+||++| |+++..|+++..|+ ++||.+ ++.+||++ .+|+||+.||++|.++
T Consensus 53 ~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNW 130 (459)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHH
Confidence 799999999999999999999999999997 67788999999886 788876 89999999 5999999999999999
Q ss_pred HHcCC--CCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCC-cccce
Q 009598 274 LKANP--NSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDK-HFNCV 350 (531)
Q Consensus 274 L~~~~--~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~-~~~~v 350 (531)
++++. .++||||++|+.+.... + . ...+||||+|+||+.++. ..+.... .++... .|+ .
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~~~-~-~------e~t~GdGA~A~lv~~~~~------~~l~~~~---~g~~~~~~~D-f 192 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYAEG-P-A------RPTGGAGAVAMLVGPNAP------IVFESKY---RGSHMAHVYD-F 192 (459)
T ss_pred HHcCCCCCCeEEEEEechhhccCC-C-C------CCCCCcceEEEEEccCCC------ceeeccc---ccccCcccch-h
Confidence 99986 59999999999665221 1 2 245699999999986442 1111111 111111 122 1
Q ss_pred eeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHH---HHHHHhh--ccCccccccccccEEE
Q 009598 351 RQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVR---RKMFKAK--VKPYIPDFKLAFEHFC 425 (531)
Q Consensus 351 ~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~---~~v~~~~--~~~~~p~~~~did~f~ 425 (531)
+.|.... +.| ...|+.+ +.+|+..+. +++.+.. ... .....+|||+||
T Consensus 193 ~rP~~~~---------~~~-----------~vdG~~s------~~~yl~~~~~~~~~~~~k~~~~~~-~g~~~~d~d~~v 245 (459)
T PLN02577 193 YKPDLAS---------EYP-----------VVDGKLS------QTCYLMALDSCYKRFCEKYEKLEG-KQFSISDADYFV 245 (459)
T ss_pred cccCCCC---------Cce-----------EEcchHH------HHHHHHHHHHHHHHHHHHhhcccc-cCCCHHHcCEEE
Confidence 2221100 011 1122221 112322221 2222211 000 012358999999
Q ss_pred EcCCCHHHHHHHHHHcCCC----------------------------------------------ccccccccccccccc
Q 009598 426 IHSGGRAVLDEIQKNLQLR----------------------------------------------DWHMEPSRMTLHRFG 459 (531)
Q Consensus 426 ~Hq~g~~vi~~v~~~Lgl~----------------------------------------------~e~~e~S~~~l~r~G 459 (531)
+||+..++..+-.+.|.+. .++++||...-++.|
T Consensus 246 fHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vG 325 (459)
T PLN02577 246 FHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVG 325 (459)
T ss_pred ecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcC
Confidence 9999877777655544311 167777877888999
Q ss_pred ccccchHHHHHHHHHhcCC-CCCCCEEEEEEeChhHhhheeeeEEccC
Q 009598 460 NTSSSSLWYELAYTEGKGR-VARGDRVWQIAFGSGFKCNSAVWRALMD 506 (531)
Q Consensus 460 NtsSaSi~~~La~~~~~gr-i~~GD~Vl~i~fGsG~~~~s~v~r~~~~ 506 (531)
|+.++|+++.|..+++... ..+|+||.+++||||........++.+.
T Consensus 326 N~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~ 373 (459)
T PLN02577 326 NMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEG 373 (459)
T ss_pred cccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCC
Confidence 9999999999999997643 4599999999999998877777776654
No 34
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.98 E-value=4.6e-31 Score=271.89 Aligned_cols=310 Identities=17% Similarity=0.249 Sum_probs=237.9
Q ss_pred CeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHH
Q 009598 123 PVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEVM 202 (531)
Q Consensus 123 ~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la 202 (531)
.++|++++.|.|. ++|..+++.+..+. +++ ++...+|++++.+.+.+| ++..|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~E--------------D~vTma 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWDE--------------DAVTMA 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----ChH------HhhhccccccccCCCCch--------------hHHHHH
Confidence 5799999999999 99999999987763 454 788889999998887764 689999
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSY 281 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~ 281 (531)
++||+++|++.++||++|++|+++| |..+...+.+..|++.||+.+++.++|+.. +|-++..||+.|.+++.+++.++
T Consensus 56 veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~~ 134 (377)
T COG3425 56 VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMISY 134 (377)
T ss_pred HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999999998 667888999999999999999999999995 99999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeeccCCCcccc
Q 009598 282 AVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIVG 361 (531)
Q Consensus 282 aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~g 361 (531)
+|||++|+.-. ...+. .....|+||+|+|++..+.. ...+.... + .++|. ++ .+++++.
T Consensus 135 ~LvI~sD~a~~---~~~~~----~E~t~GAGavA~lIg~n~~~----~a~~~~~~-s--yt~d~-~D-FwRp~~~----- 193 (377)
T COG3425 135 GLVIGADTAQY---APGDA----LEYTAGAGAVAFLIGKNPPI----VAEFEGTG-S--YTTDT-PD-FWRPDGQ----- 193 (377)
T ss_pred eEEEeehhhcc---CCCcc----cCccCCCceEEEEEccCCCe----EEEecCce-E--EecCC-Cc-ccccCCC-----
Confidence 99999998422 22222 23678999999999975432 11221111 1 12211 11 1223221
Q ss_pred cccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHH---HHHHHHhhccCccccccccccEEEEcCCCHHHHHHHH
Q 009598 362 VSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLV---RRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAVLDEIQ 438 (531)
Q Consensus 362 ~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~---~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~vi~~v~ 438 (531)
..|.+.|+ ++++ .|++.+ .++.++.. +.-.+|||++|+||++.++-...+
T Consensus 194 -----~yp~~dg~---------------~s~~--~Y~~~~~~a~~~~~~k~-----gls~~dfdy~vfH~P~~k~~~ka~ 246 (377)
T COG3425 194 -----PYPYVDGR---------------FSEP--AYFKHVENAAKGYMEKT-----GLSPDDFDYIVFHQPNGKFPKKAA 246 (377)
T ss_pred -----cccccCce---------------ecHH--HHHHHHHHHHHHHHHHh-----CCChhhhCeEEecCCCCchHHHHH
Confidence 11222221 1111 122211 12222211 111489999999999999999999
Q ss_pred HHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhheeeeEEccCCC
Q 009598 439 KNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNSAVWRALMDIP 508 (531)
Q Consensus 439 ~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s~v~r~~~~~~ 508 (531)
+.++.+.+++.|+..+.++.||+.|+|+++.|+.+++..+ .+||||++.+||+|........+....+.
T Consensus 247 k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 247 KSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred HHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 9999999999999999999999999999999999998765 79999999999999776666666666654
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.97 E-value=3.1e-30 Score=276.17 Aligned_cols=316 Identities=17% Similarity=0.239 Sum_probs=216.0
Q ss_pred CeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEe--ecCCCcCCCCCcchhhhhhcHHH
Q 009598 123 PVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETY--LSRGITSRPPNICIHEARVEADE 200 (531)
Q Consensus 123 ~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~--~~~~~~~~~~~~~l~~~~~ea~~ 200 (531)
+|+|.+++.|+|+ ++|+++++.++.+. +++ |+ .+||++|+. +++++ ++.+
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~------k~--~~GI~~rr~av~~~~E--------------d~~t 52 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAG------KY--TIGLGQTKMGFCTDRE--------------DINS 52 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHH------Hh--eechhheecccCCCCC--------------CHHH
Confidence 5899999999999 99999999887763 444 44 599999984 44443 4799
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHc---CCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHY---KLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~L---Gl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
|+..|++++|++++++|++||+||++| |+++..|+.+..|++.| |.+ ++.+||+. .+|+|++.||.+|.+++++
T Consensus 53 ma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~-~AC~G~t~AL~~A~~~i~s 130 (454)
T TIGR01833 53 LCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTT-NACYGGTAALFNAINWIES 130 (454)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEecc-ccchhHHHHHHHHHHHHHc
Confidence 999999999999999999999999997 78899999999999955 454 89999999 5999999999999999998
Q ss_pred CC--CCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeecc
Q 009598 277 NP--NSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAE 354 (531)
Q Consensus 277 ~~--~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~e 354 (531)
+. .++||||++|+.- + .+.+ ...++||||+|+||+.++.- .++. ++..++.....++|+ |.
T Consensus 131 ~~~~~~~aLVV~sDia~--y---~~~~---~~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF~r----P~ 193 (454)
T TIGR01833 131 SSWDGRYALVVAGDIAV--Y---AKGN---ARPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDFYK----PD 193 (454)
T ss_pred CCcCCCeEEEEEecccc--c---cCCC---eeeccccceEEEEeccCccc----eecC-ccceEEEeecccccC----CC
Confidence 85 5999999999932 2 2222 23578999999999976541 0111 011122222222332 21
Q ss_pred CCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhH-HHHHHHHHHHHHhhccCcc---ccccccccEEEEcCCC
Q 009598 355 DDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFR-FFVTLVRRKMFKAKVKPYI---PDFKLAFEHFCIHSGG 430 (531)
Q Consensus 355 d~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~-~~~~~~~~~v~~~~~~~~~---p~~~~did~f~~Hq~g 430 (531)
. ..+.|.+.|+- .+. -+-+.+. .|... ++....+++... ....+|||++|+|++.
T Consensus 194 ~---------~~~~p~vdg~~---S~~-------~Yl~a~~~~y~~y--~~~~~~a~~~~~~~~~~~~~dfd~~~fH~P~ 252 (454)
T TIGR01833 194 L---------ASEYPVVDGKL---SIQ-------CYLSALDRCYKSY--CKKIEKQWGKSGGDRKFTLNDFDYMVFHSPY 252 (454)
T ss_pred C---------CCcccccCCcc---CHH-------HHHHHHHHHHHHH--HHHHHHhhhhhccccCCCHhHcCEEeccCCc
Confidence 1 00112222210 000 0000000 01011 111111111110 1124799999999997
Q ss_pred HHHHHHH-HHHc---------------------------------------------CCCcccccccccccccccccccc
Q 009598 431 RAVLDEI-QKNL---------------------------------------------QLRDWHMEPSRMTLHRFGNTSSS 464 (531)
Q Consensus 431 ~~vi~~v-~~~L---------------------------------------------gl~~e~~e~S~~~l~r~GNtsSa 464 (531)
.++..+. .+.+ +...++++||...-++.||+.++
T Consensus 253 ~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~Yta 332 (454)
T TIGR01833 253 CKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTA 332 (454)
T ss_pred ccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhh
Confidence 7666553 3222 11126788887777799999999
Q ss_pred hHHHHHHHHHhcCC--CCCCCEEEEEEeChhHhhheeeeEEccC
Q 009598 465 SLWYELAYTEGKGR--VARGDRVWQIAFGSGFKCNSAVWRALMD 506 (531)
Q Consensus 465 Si~~~La~~~~~gr--i~~GD~Vl~i~fGsG~~~~s~v~r~~~~ 506 (531)
|+++.|..+++..+ ...|+||.|++||||........+..+.
T Consensus 333 Slyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 333 SLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 99999999997543 5679999999999998777777776654
No 36
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.97 E-value=2.5e-31 Score=259.70 Aligned_cols=203 Identities=20% Similarity=0.303 Sum_probs=162.3
Q ss_pred hcCCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCH--HhHHHHHHHHHHcCCCeEEeecCCCc-C------CCC-
Q 009598 118 SKRSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQE--ESLQFQKRIASRASVGDETYLSRGIT-S------RPP- 187 (531)
Q Consensus 118 ~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~--~~~~f~~ki~~~sGI~er~~~~~~~~-~------~~~- 187 (531)
.+.+.+.+|+++|...|+ ++++++++.+.+.+.-..++ +..+++++|++++||++|+..-+.++ . ...
T Consensus 9 ~~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 356788999999999999 99999999886433222232 44567889999999999987633211 0 011
Q ss_pred ---CcchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHH
Q 009598 188 ---NICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGL 264 (531)
Q Consensus 188 ---~~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l 264 (531)
..+++.+.+++.+|+.+|++++|+++|++++|||+||++|+++...|++..+|+++|||++++..+.|++|||+|++
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 23467789999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCC--CCccccccccccccceEEEEEeeCC
Q 009598 265 ISIELAKNLLKANPNSYAVVVSTENITQNWYSG--NDRSMLLCNCLFRMGGAAVLLSNKA 322 (531)
Q Consensus 265 ~AL~lA~~lL~~~~~~~aLVVstE~~S~~~~~~--~dr~~ll~~~lfgDGAaAvLLs~~~ 322 (531)
.||.+|+++.+++|..+||||+.|.+|.+|..+ .+++++++++||||||+|+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 999999999999999999999999999877643 3467889999999999999999764
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=1.5e-27 Score=236.76 Aligned_cols=235 Identities=18% Similarity=0.187 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +..+++++ .||++++.||++|.++|+.
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 6789999999999999999999999999974 6667899999999999998 79999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccc---ccceeeeEEEEEecCCCCcccceeec
Q 009598 277 NPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSR---SKYELVHLVRTHKGADDKHFNCVRQA 353 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~---~~~~L~~~v~t~~~~d~~~~~~v~~~ 353 (531)
+..++|||+++|. ++|||||+|+||++++....+ ...++.+ .....++..+.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~----- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVS---TAATFDGASMV----- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEE---EEEcCCCCCCC-----
Confidence 9999999999998 689999999999986532111 1122222 11111211000
Q ss_pred cCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHH
Q 009598 354 EDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAV 433 (531)
Q Consensus 354 ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~v 433 (531)
..... +. .....++.++..- --++|+|+|++|+.+..+
T Consensus 140 --------~~~~~-------------------------~~----~~~~i~~~l~~ag-----~~~~did~~~~h~~~~~~ 177 (254)
T cd00327 140 --------PAVSG-------------------------EG----LARAARKALEGAG-----LTPSDIDYVEAHGTGTPI 177 (254)
T ss_pred --------CCCCh-------------------------HH----HHHHHHHHHHHcC-----CCHHHCCEEEccCCcCcc
Confidence 00000 00 0011133343211 114799999999999999
Q ss_pred HHHHHHHcCCCccccc--ccccccccccccccchHHHHHHHHHhcCCCC-------CCCEEEEEEeChhHhhheeee
Q 009598 434 LDEIQKNLQLRDWHME--PSRMTLHRFGNTSSSSLWYELAYTEGKGRVA-------RGDRVWQIAFGSGFKCNSAVW 501 (531)
Q Consensus 434 i~~v~~~Lgl~~e~~e--~S~~~l~r~GNtsSaSi~~~La~~~~~gri~-------~GD~Vl~i~fGsG~~~~s~v~ 501 (531)
.+.+++.+++++++.. +...+..+|||++++|.++.|.++.+..+.+ +||++++.++|.|++++++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 178 GDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred ccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 9999999999887774 4467889999999999999999998876665 899999999999999998875
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.92 E-value=7.3e-25 Score=226.17 Aligned_cols=251 Identities=14% Similarity=0.154 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHHHhcCCC----CCCcCEEEEeecC-CCC---------------------CCcHHHHHHHHcCCCCCce
Q 009598 198 ADEVMFGALDSLFEKTGVE----PSDVGILIVNCSL-FNP---------------------VPSLSSMIVNHYKLRDDIK 251 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~----p~dID~LI~~ss~-~~~---------------------~Ps~a~~I~~~LGl~~~~~ 251 (531)
..+|+..|++++|+++|++ +++||.||++++. .+. .|+.+.+|+..+|+ +.+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI--HGP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC--CCC
Confidence 4789999999999999999 9999999988653 333 78899999999999 468
Q ss_pred eEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCC----------C--Cc--cccccccccccceEEEE
Q 009598 252 TYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQNWYSG----------N--DR--SMLLCNCLFRMGGAAVL 317 (531)
Q Consensus 252 ~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~~~~----------~--dr--~~ll~~~lfgDGAaAvL 317 (531)
+++++ .||++++.||++|.++|++++.+++||+++|..+..+... + .+ +.....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 99999 6999999999999999999999999999999876532110 0 00 11124689999999999
Q ss_pred EeeCCCCcc---cccceeeeEEEEEecCCCCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhh
Q 009598 318 LSNKARDRS---RSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQF 394 (531)
Q Consensus 318 Ls~~~~~~~---~~~~~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~ 394 (531)
|++.+.... +...++.+. ....++..... + . |..+.
T Consensus 168 L~~~~~a~~~~~~~~~~i~~~---~~~~~~~~~~~------------~--~-----------------------~~~~~- 206 (332)
T cd00825 168 VEELEHALARGAHIYAEIVGT---AATIDGAGMGA------------F--A-----------------------PSAEG- 206 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEEE---EEccCCCCCCC------------C--C-----------------------cCHHH-
Confidence 997653211 111222222 11122111000 0 0 00000
Q ss_pred HHHHHHHHHHHHHh-hccCccccccccccEEEEcCCCHHHHHHHHHHcCCCcccc--cccccccccccccccchHHHHHH
Q 009598 395 RFFVTLVRRKMFKA-KVKPYIPDFKLAFEHFCIHSGGRAVLDEIQKNLQLRDWHM--EPSRMTLHRFGNTSSSSLWYELA 471 (531)
Q Consensus 395 ~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~--e~S~~~l~r~GNtsSaSi~~~La 471 (531)
... ..+++++. .+. .+|||++++|+.|..+.+.+++.++++.++. .+...+..+|||++++|.++.|.
T Consensus 207 --~~~-~i~~al~~agl~------~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~ 277 (332)
T cd00825 207 --LAR-AAKEALAVAGLT------VWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVD 277 (332)
T ss_pred --HHH-HHHHHHHHcCCC------HhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHH
Confidence 001 11334432 222 3799999999999999999999888876642 13367899999999999999999
Q ss_pred HHHhcCCCC-------------------------CCCEEEEEEeChhHhhheeee
Q 009598 472 YTEGKGRVA-------------------------RGDRVWQIAFGSGFKCNSAVW 501 (531)
Q Consensus 472 ~~~~~gri~-------------------------~GD~Vl~i~fGsG~~~~s~v~ 501 (531)
.+.+.++.+ +|+++++++||.|.+++++|+
T Consensus 278 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 278 EAVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 998866655 889999999999999998874
No 39
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.79 E-value=1.1e-18 Score=163.58 Aligned_cols=167 Identities=18% Similarity=0.256 Sum_probs=127.9
Q ss_pred CCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHH
Q 009598 120 RSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEAD 199 (531)
Q Consensus 120 r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~ 199 (531)
||++|+|.+++.|.|. .+++.+++.+..+. ++. |+....|.++..+.++. |++.
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~--------------ED~v 54 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPD--------------EDIV 54 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TT--------------S-HH
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCc--------------ccHH
Confidence 7999999999999999 99999999887664 444 55544555555666655 3689
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCC--CCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKL--RDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl--~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
.|+..|++++|++.+++|++|+.|+|+| |......+.+.+|++.||+ ..++..+|+. .+|.|+..||+.|.+++++
T Consensus 55 TmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k-~ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 55 TMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMK-QACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp HHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEE-SGGGHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehh-hhhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998 5566788899999999999 5578999999 5999999999999999999
Q ss_pred CC--CCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeC
Q 009598 277 NP--NSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNK 321 (531)
Q Consensus 277 ~~--~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~ 321 (531)
++ ++++|||++|+. + |.... +...-|-||+|+|++.+
T Consensus 134 ~~~~g~~aLVVasDiA-~--y~~g~-----~e~TqGAGAVAmLi~~n 172 (174)
T PF01154_consen 134 SPWDGRKALVVASDIA-R--YDLGS-----AEPTQGAGAVAMLIGPN 172 (174)
T ss_dssp TTSTTEEEEEEEEEEE-----STTT-----TGGG-EEEEEEEEEECS
T ss_pred CCCCCCeEEEEecccc-c--cCCCC-----ccccccceeEEEEecCC
Confidence 74 689999999994 3 22111 23567999999999975
No 40
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.78 E-value=2.1e-19 Score=151.93 Aligned_cols=83 Identities=35% Similarity=0.530 Sum_probs=75.0
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhh
Q 009598 418 KLAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCN 497 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~ 497 (531)
.+|||+|++||.+.++++.+.+.+|++++++ ..++++||||+|+|+|++|+++.++|++++||+|+++++|+|++|+
T Consensus 8 ~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~~ 84 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSWG 84 (90)
T ss_dssp GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEEE
T ss_pred HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhheeE
Confidence 3899999999999999999999999999998 6899999999999999999999999999999999999999999999
Q ss_pred eeeeEE
Q 009598 498 SAVWRA 503 (531)
Q Consensus 498 s~v~r~ 503 (531)
+++|||
T Consensus 85 ~~~~~~ 90 (90)
T PF08541_consen 85 AAVLRW 90 (90)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999997
No 41
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.77 E-value=9.4e-19 Score=162.07 Aligned_cols=128 Identities=23% Similarity=0.418 Sum_probs=93.6
Q ss_pred eeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCC
Q 009598 350 VRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSG 429 (531)
Q Consensus 350 v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~ 429 (531)
+.+.-++.| +.+.|+|++|.+.++.++..+ .+.++.. ...+ .++.+|++|+|
T Consensus 17 m~~~i~~~G-f~~~Ls~~vP~~i~~~i~~~~----------------------~~~L~~~---g~~~--~~~~~wavHPG 68 (151)
T PF02797_consen 17 MGWDIGDTG-FHFILSKEVPDLISDNIPPFV----------------------EDLLARH---GLSD--WDILFWAVHPG 68 (151)
T ss_dssp EEEEEETTE-EEEEE-TTHHHHHHHHHHHHH----------------------HHHHHGG---TCCS--GGGSEEEEE-S
T ss_pred eEEEEeCCe-EEEEEhhHhHHHHHHHHHHHH----------------------HHHHhhh---cccc--cccceeeecCC
Confidence 444444444 678899999998765332211 2233221 0222 34568999999
Q ss_pred CHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHh----cCCCCC---CCEEEEEEeChhHhhheeeeE
Q 009598 430 GRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEG----KGRVAR---GDRVWQIAFGSGFKCNSAVWR 502 (531)
Q Consensus 430 g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~----~gri~~---GD~Vl~i~fGsG~~~~s~v~r 502 (531)
|++|++.+++.|+|+++++.+|+.+|++|||+||+++++.|+++.+ +|.... +|+++++|||+||+..++++|
T Consensus 69 G~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr 148 (151)
T PF02797_consen 69 GRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLR 148 (151)
T ss_dssp SHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEE
T ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEe
Confidence 9999999999999999999999999999999999999999999887 354433 489999999999999999999
Q ss_pred Ecc
Q 009598 503 ALM 505 (531)
Q Consensus 503 ~~~ 505 (531)
.++
T Consensus 149 ~~~ 151 (151)
T PF02797_consen 149 SVP 151 (151)
T ss_dssp E-B
T ss_pred eCC
Confidence 763
No 42
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.70 E-value=9.4e-16 Score=156.19 Aligned_cols=327 Identities=20% Similarity=0.272 Sum_probs=218.8
Q ss_pred cCCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcH
Q 009598 119 KRSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEA 198 (531)
Q Consensus 119 ~r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea 198 (531)
.+|.+|.|.++-+|.|. .-|+++++..+-+. +.. | -..|+|+....-.+ -||+.
T Consensus 7 ~~p~dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g------K--ytIGLGq~~Mgfcs------------drEDi 60 (462)
T KOG1393|consen 7 NWPKDVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG------K--YTIGLGQTQMGFCS------------DREDI 60 (462)
T ss_pred cCccccceeEEEEEcCc--cccChhhHhhcCCc----ccc------c--eEeccCcceecccC------------chhhh
Confidence 36789999999999999 78999999876543 222 1 23688876554222 24567
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcC--CCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 199 DEVMFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYK--LRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 199 ~~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LG--l~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
..++..+.++++++-+|+++.|+.|.|.| +.-.-..|.-..+.+.++ =..|+...|..+ +|.||..||--|-+|++
T Consensus 61 ~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiE 139 (462)
T KOG1393|consen 61 ISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIE 139 (462)
T ss_pred hhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhh
Confidence 88899999999999999999999999998 444556788788888887 556899999995 99999999999999999
Q ss_pred cCC--CCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEEEecCCCCcccceeec
Q 009598 276 ANP--NSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQA 353 (531)
Q Consensus 276 ~~~--~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ 353 (531)
+.. +++||||++|+.- |-.|+-| +.=|-||.|+|+++...-. |+- +...+|+.. .|+- |-|
T Consensus 140 SssWDGr~aivV~gDIAv--Y~~G~aR------pTGGAgAVAmLIgPnApi~----fer-glr~thM~h---ayDF-yKP 202 (462)
T KOG1393|consen 140 SSSWDGRYAIVVCGDIAV--YAKGNAR------PTGGAGAVAMLIGPNAPII----FER-GLRATHMQH---AYDF-YKP 202 (462)
T ss_pred hcccCCceeEEEEeeEEE--ecCCCCC------CCCCcceEEEEEcCCCceE----ecc-cchhhhhhh---hhhc-cCC
Confidence 974 7999999999842 2234434 4569999999999765421 110 111222211 2221 111
Q ss_pred cCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHhhccCccccccccccEEEEcCCCHHH
Q 009598 354 EDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLAFEHFCIHSGGRAV 433 (531)
Q Consensus 354 ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~Hq~g~~v 433 (531)
| +..+-|-|.|.- .|+- +-+.+....+...+++-+...+. -++-.++||.+++|.+--++
T Consensus 203 -d--------l~SEyPvVDGkl---Si~c-------Yl~Ald~cY~~~~kK~~~~~~~~-~~~~l~~fdy~ifHsP~cKl 262 (462)
T KOG1393|consen 203 -D--------LLSEYPVVDGKL---SIQC-------YLSALDRCYTVYRKKIAAQWQKS-GSDNLNSFDYIIFHSPYCKL 262 (462)
T ss_pred -C--------CCCcCceecCee---hHHH-------HHHHHHHHHHHHHHHHHHHhccc-cCcccccCCeEEEeCchhhh
Confidence 1 233445444420 0100 00111110011112222221111 12224689999999987655
Q ss_pred HHH-HH-----------------------------------------HHcCCCcccccccccccccccccccchHHHHHH
Q 009598 434 LDE-IQ-----------------------------------------KNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELA 471 (531)
Q Consensus 434 i~~-v~-----------------------------------------~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La 471 (531)
.+. ++ -...+-.+|+.+|...-.+.||+.++|+...|+
T Consensus 263 vqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~ 342 (462)
T KOG1393|consen 263 VQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLA 342 (462)
T ss_pred HHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHH
Confidence 544 11 122333447777777777999999999999999
Q ss_pred HHHhcC--CCCCCCEEEEEEeChhHhhheeeeEEccCCCC
Q 009598 472 YTEGKG--RVARGDRVWQIAFGSGFKCNSAVWRALMDIPV 509 (531)
Q Consensus 472 ~~~~~g--ri~~GD~Vl~i~fGsG~~~~s~v~r~~~~~~~ 509 (531)
.++... .--.|.||.+.++|+|.......+|...+..|
T Consensus 343 sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p 382 (462)
T KOG1393|consen 343 SLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP 382 (462)
T ss_pred HHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc
Confidence 988865 33569999999999999999899998886554
No 43
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.70 E-value=1e-15 Score=156.14 Aligned_cols=116 Identities=15% Similarity=0.220 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKAN 277 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~ 277 (531)
..+|+.+|+++||+++|++++|||.+|+++.+. .+..+..++++||++ .|++++ +|++++.||.+|..++++|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGIP----~fdV~~-ACSTf~~AL~lAa~lI~SG 122 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGIP----FLGLYG-ACSTSMETLALGAMLVDGG 122 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCCC----EEEEec-cCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999999887544 345688999999973 599995 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC---CCC---CC--CCccccccccccccceEEEEEeeCCC
Q 009598 278 PNSYAVVVSTENITQ---NWY---SG--NDRSMLLCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 278 ~~~~aLVVstE~~S~---~~~---~~--~dr~~ll~~~lfgDGAaAvLLs~~~~ 323 (531)
..++||||++|..+. .+. .+ ++|. +..+|+|||+|+||++.+.
T Consensus 123 ~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 123 FADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCC
Confidence 999999999998882 111 12 4555 6789999999999998654
No 44
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.67 E-value=1.5e-15 Score=159.33 Aligned_cols=311 Identities=13% Similarity=0.078 Sum_probs=191.4
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhcc-CCCCHHhHHHH-----HHHHHHcCCCeEEeecCCCcCCCCCcchhhhh
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEES-SFFQEESLQFQ-----KRIASRASVGDETYLSRGITSRPPNICIHEAR 195 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~-~~~~~~~~~f~-----~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~ 195 (531)
++++|++.|+.-|=- .+.++....+... .++... .|+ ++|..++|+.+|++.. .
T Consensus 3 ~~v~I~~~g~vs~lG---~~~~~~~aa~ragi~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~---------------~ 62 (348)
T PRK06147 3 RALAIVGSGMVTAVG---LDAPSSCAAIRARLDNFQET--RFIDPPGGEWLIGAPVPLPPPWRG---------------P 62 (348)
T ss_pred CceEEEecceeecCc---CCHHHHHHHHHccccccccc--ccccCCCCCceEeecCcCCcccCc---------------h
Confidence 469999999998862 2333333322110 111100 000 1344455554444321 1
Q ss_pred hcHHHHHHHHHHHHHHhcC-CCCCCcCEEEEeec------CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHH
Q 009598 196 VEADEVMFGALDSLFEKTG-VEPSDVGILIVNCS------LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIE 268 (531)
Q Consensus 196 ~ea~~la~~Aa~~aL~~ag-i~p~dID~LI~~ss------~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~ 268 (531)
+...+|+..|++++|++++ +++++||++|+.++ ++...|.++..+++++|+.....+++++ .||++++.||.
T Consensus 63 ~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~-~~casg~~Al~ 141 (348)
T PRK06147 63 ERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIA-RGRVSGAVALA 141 (348)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCccccc-ccchHHHHHHH
Confidence 2367899999999999999 89999999998643 2233456788999999996456789999 49999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeccCCCC----CC------CCCCccccccccccccceEEEEEeeCCCCcccccceeeeEEEE
Q 009598 269 LAKNLLKANPNSYAVVVSTENITQN----WY------SGNDRSMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRT 338 (531)
Q Consensus 269 lA~~lL~~~~~~~aLVVstE~~S~~----~~------~~~dr~~ll~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~v~t 338 (531)
.|.++|+.+..+.+||+++|.++.. ++ ..+++. ...+|||||+++||++.+....+ .-++.. .
T Consensus 142 ~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~r-ga~i~a-~-- 214 (348)
T PRK06147 142 QARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEAP-GLPLLG-L-- 214 (348)
T ss_pred HHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhcC-CCceEE-E--
Confidence 9999999999999999999987651 11 012222 35789999999999976542211 122222 1
Q ss_pred EecCCCCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccchhhhhHHHHHHHHHHHHHh-hccCccccc
Q 009598 339 HKGADDKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKA-KVKPYIPDF 417 (531)
Q Consensus 339 ~~~~d~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~ 417 (531)
..+.+...+. .+.+. | +-.+.+ ... -++.++. .+.
T Consensus 215 g~~~~~~~~~---------------~~~~~----------------p---~~g~gl---~~a-i~~AL~~agl~------ 250 (348)
T PRK06147 215 GLGREPAPVG---------------ESEDL----------------P---LRGDGL---TQA-IRAALAEAGCG------ 250 (348)
T ss_pred EEeecCCCcc---------------cCCCC----------------C---CChHHH---HHH-HHHHHHHcCCC------
Confidence 1111211100 00000 0 000110 000 1223332 222
Q ss_pred cccccEEEEcCCCHHHHHH-----HHHHcCCCcccccccccccccccccccchHHHHHHHHHh--cCCCCCCCEEEEEEe
Q 009598 418 KLAFEHFCIHSGGRAVLDE-----IQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEG--KGRVARGDRVWQIAF 490 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~-----v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~--~gri~~GD~Vl~i~f 490 (531)
.+|||+++.|..|....+. +.+.++-..+.. +-..+-..+||+++++-.+++..... +...-+|+++++++-
T Consensus 251 ~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~-~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~ 329 (348)
T PRK06147 251 LEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFF-DLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLS 329 (348)
T ss_pred HHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCC-ceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEec
Confidence 3799999999987666443 334455332222 11345667999999999999886443 134557999999998
Q ss_pred ChhHhhheeeeEEcc
Q 009598 491 GSGFKCNSAVWRALM 505 (531)
Q Consensus 491 GsG~~~~s~v~r~~~ 505 (531)
.-.-..++++++..+
T Consensus 330 ~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 330 DDDGARAALVLEYRR 344 (348)
T ss_pred CCCCceEEEEEeccc
Confidence 877778999988543
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.58 E-value=9.6e-14 Score=142.09 Aligned_cols=117 Identities=18% Similarity=0.238 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKAN 277 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~ 277 (531)
..+|+.+|+++||+++|++++|||.+|+++...+ +..+..+++.+|+ ++|++++ +|+++..||.+|..+++++
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG 128 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGG 128 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999998875433 4678899999986 5999995 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC---CCCCC----CCccccccccccccceEEEEEeeCCC
Q 009598 278 PNSYAVVVSTENITQ---NWYSG----NDRSMLLCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 278 ~~~~aLVVstE~~S~---~~~~~----~dr~~ll~~~lfgDGAaAvLLs~~~~ 323 (531)
..++||||++|..+. .|..+ ..|.. +..++++||+|+||++...
T Consensus 129 ~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CCCEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCC
Confidence 999999999999885 23322 23332 5679999999999997654
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.47 E-value=7.2e-12 Score=133.32 Aligned_cols=185 Identities=10% Similarity=0.132 Sum_probs=118.5
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccC-CCCHHhHHHHHHHHHHcCCCeEE--eecCCC--cCCCCCcchhhhhh
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESS-FFQEESLQFQKRIASRASVGDET--YLSRGI--TSRPPNICIHEARV 196 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~er~--~~~~~~--~~~~~~~~l~~~~~ 196 (531)
++|+|+++||..|. -.+.+++.+.+.... .+.+-. +| +..+...+. ..+... ...++ .......
T Consensus 1 ~~i~I~G~g~~~p~---g~~~~~~~~~l~~g~~~~~~~~-~~-----~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~ 69 (406)
T cd00834 1 RRVVITGLGAVTPL---GNGVEEFWEALLAGRSGIRPIT-RF-----DASGFPSRIAGEVPDFDPEDYLDR--KELRRMD 69 (406)
T ss_pred CcEEEECcceeCCC---cCCHHHHHHHHHcCCCeeEECC-cc-----cccCCCccEEEEcCCCChhhcCCH--HHhccCC
Confidence 47999999999998 356777777654210 010000 00 001111111 111111 00111 0111123
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCE----EEEeecC-C--------------------------CCCCcHHHHHHHHcC
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGI----LIVNCSL-F--------------------------NPVPSLSSMIVNHYK 245 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~----LI~~ss~-~--------------------------~~~Ps~a~~I~~~LG 245 (531)
...+|+..|++++|+++|+++++||. ++++++. . ...+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 47789999999999999999877664 4444322 1 123567889999999
Q ss_pred CCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC----------------------CCCCCCCcccc
Q 009598 246 LRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQ----------------------NWYSGNDRSML 303 (531)
Q Consensus 246 l~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~----------------------~~~~~~dr~~l 303 (531)
++ ..++.++ .+|++++.||..|.++|++|..++|||+++|..+. .......+.
T Consensus 150 l~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~-- 224 (406)
T cd00834 150 LR--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR-- 224 (406)
T ss_pred CC--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC--
Confidence 96 4788999 59999999999999999999999999999998761 011111111
Q ss_pred ccccccccceEEEEEeeCCC
Q 009598 304 LCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 304 l~~~lfgDGAaAvLLs~~~~ 323 (531)
...++||||+|+||++.+.
T Consensus 225 -~g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 225 -DGFVLGEGAGVLVLESLEH 243 (406)
T ss_pred -CCEeeeccEEEEEEecHHH
Confidence 2468999999999997553
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.47 E-value=2.3e-12 Score=137.04 Aligned_cols=94 Identities=18% Similarity=0.289 Sum_probs=84.7
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
...+|+.+|++++|+++|++++|||.||++++ +++..|..+..++..+|+++++.+|+++ .+|++++.+|.+|.++++
T Consensus 21 ~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~ 99 (386)
T cd00751 21 SADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIA 99 (386)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999998864 5555788888899999998558899999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 009598 276 ANPNSYAVVVSTENIT 291 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S 291 (531)
+|..++|||+++|.+|
T Consensus 100 sG~~~~vLv~g~e~~s 115 (386)
T cd00751 100 AGEADVVVAGGVESMS 115 (386)
T ss_pred CCCCCeEEEeeeeccc
Confidence 9999999999999865
No 48
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.39 E-value=6.7e-13 Score=110.06 Aligned_cols=65 Identities=25% Similarity=0.467 Sum_probs=54.6
Q ss_pred EEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCC
Q 009598 253 YNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKA 322 (531)
Q Consensus 253 fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~ 322 (531)
|||+ ++|++++.||++|.++++++..++||||++|..+. +.+..++. ...+|||||+|+||++.+
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~---~~~~~gDgAaA~vl~~~~ 65 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQ---TAFIFGDGAAAVVLSRDE 65 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHH---HHTTB-EEEEEEEEEEES
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccC---cceeecchheEEEEEecC
Confidence 7999 59999999999999999999999999999999988 44445554 457999999999999974
No 49
>PRK09051 beta-ketothiolase; Provisional
Probab=99.38 E-value=6.1e-11 Score=126.51 Aligned_cols=94 Identities=17% Similarity=0.276 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCC-CcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPV-PSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~-Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
..+|+.+|++++|+++|++|+|||.+|++++ +++.. +..+..+...+|+++++++++++ .+|++|+.|+.+|.++++
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAIL 105 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999864 44544 34556666778997679999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+++||+++|.+|.
T Consensus 106 sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 106 LGDADVAIGGGAESMSR 122 (394)
T ss_pred cCCCCEEEEEeehhccc
Confidence 99999999999998874
No 50
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.37 E-value=4e-11 Score=127.96 Aligned_cols=94 Identities=19% Similarity=0.285 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|+.+|++++|+++|++|+|||.+|++++ +....|..+..++.++|++..+++|+++ .+|++++.++..|.+++++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~s 104 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRC 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999875 4334667788899999998558999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009598 277 NPNSYAVVVSTENITQ 292 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~ 292 (531)
|..+++||+++|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 105 GDAEVIIAGGQENMSL 120 (393)
T ss_pred CCCCEEEEEEEhhhcc
Confidence 9999999999997764
No 51
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=8.5e-11 Score=125.17 Aligned_cols=92 Identities=14% Similarity=0.177 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCC--CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNP--VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~--~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
..+|+.+|++++|+++|++++|||.+|++++ ++.. .|..+.+++..+|++ ...+++++ .+|++++.+|..|.+++
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I 99 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHH
Confidence 6889999999999999999999999998754 3432 477889999999997 78899999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccCC
Q 009598 275 KANPNSYAVVVSTENIT 291 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S 291 (531)
++|..+++||+++|.++
T Consensus 100 ~sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 100 ASGEADVVLAAGVEKMT 116 (389)
T ss_pred HCCCCCEEEEEEEEecc
Confidence 99999999999999765
No 52
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=1.1e-10 Score=124.29 Aligned_cols=92 Identities=12% Similarity=0.065 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCC--CcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPV--PSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~--Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
..+|+.+|++++|+++|++++|||.+|+++++++.. +..+..|++++|++ +..++++++ +|+++..++..|.++++
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~-~casg~~al~~A~~~I~ 101 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVHT-AGSVGGSTAVVAASLVQ 101 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEec-cCHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999876544321 22336899999997 688999995 99999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 009598 276 ANPNSYAVVVSTENIT 291 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S 291 (531)
+|..++||||++|..+
T Consensus 102 sG~~~~vLVvg~e~~s 117 (386)
T PRK08313 102 SGVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCCEEEEEEEEEcc
Confidence 9999999999999764
No 53
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.33 E-value=1.7e-10 Score=121.94 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=84.8
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
+..+|+.+|++++|+++|++++|||.+|+.++ +....|..+..++.++|++ ++.+++++ .+|++++.++..|.++++
T Consensus 15 ~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~ 92 (375)
T cd00829 15 SPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIA 92 (375)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999998764 4444577889999999997 78999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
++..+.|||+++|..+.
T Consensus 93 sG~~~~vlv~g~e~~s~ 109 (375)
T cd00829 93 SGLADVVLVVGAEKMSD 109 (375)
T ss_pred hCCCCEEEEEEEeeccc
Confidence 99999999999998764
No 54
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.32 E-value=2.4e-10 Score=121.55 Aligned_cols=93 Identities=14% Similarity=0.248 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSL-FNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|+.+|++++|+++|++++|||.+|++++. ....+..+..++..+|++ +..+++++ ++|++++.||..|..++++
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~s 98 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVAS 98 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHC
Confidence 68899999999999999999999999988643 222233478899999998 56789999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009598 277 NPNSYAVVVSTENITQ 292 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~ 292 (531)
|..+++|||++|.+|.
T Consensus 99 G~~~~vLvvg~e~~s~ 114 (385)
T PRK12578 99 GLVDMAIAVGVDKMTE 114 (385)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998653
No 55
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.31 E-value=2.1e-10 Score=122.65 Aligned_cols=95 Identities=16% Similarity=0.244 Sum_probs=81.7
Q ss_pred cHHHHHHHHHHHHHHhc-CCCCCCcCEEEEee-cCCCCCCcHHHHHH-HHcCCCCCceeEEecCCCchHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKT-GVEPSDVGILIVNC-SLFNPVPSLSSMIV-NHYKLRDDIKTYNLGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~a-gi~p~dID~LI~~s-s~~~~~Ps~a~~I~-~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~l 273 (531)
...+|+.+|++++|+++ |++|+|||.+|+++ .++...|....+++ ..+|++..+++++++ .+|++|+.|+..|.++
T Consensus 30 s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~ 108 (399)
T PRK09052 30 RPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADR 108 (399)
T ss_pred CHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHH
Confidence 36899999999999997 99999999999986 45555565566654 555997458999999 5999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 009598 274 LKANPNSYAVVVSTENITQ 292 (531)
Q Consensus 274 L~~~~~~~aLVVstE~~S~ 292 (531)
+++|..+.+||++.|.+|.
T Consensus 109 I~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 109 IRVGEADVMIAAGVESMSM 127 (399)
T ss_pred HHCCCCCEEEEEEEecccc
Confidence 9999999999999998874
No 56
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.30 E-value=1.3e-10 Score=124.59 Aligned_cols=122 Identities=16% Similarity=0.204 Sum_probs=94.3
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcC----EEEEeec-CCCC-------------------CCcHHHHHHHHcCCCCCcee
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVG----ILIVNCS-LFNP-------------------VPSLSSMIVNHYKLRDDIKT 252 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID----~LI~~ss-~~~~-------------------~Ps~a~~I~~~LGl~~~~~~ 252 (531)
....|+..|++++|+++|+++++|| .+|++++ .++. .+..+..|+..+|++ -.+
T Consensus 86 ~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~ 163 (424)
T smart00825 86 PQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPS 163 (424)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCc
Confidence 3567899999999999999999998 6777753 2221 445778899999997 378
Q ss_pred EEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC----------CCC------CCCccccccccccccceEEE
Q 009598 253 YNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQN----------WYS------GNDRSMLLCNCLFRMGGAAV 316 (531)
Q Consensus 253 fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~----------~~~------~~dr~~ll~~~lfgDGAaAv 316 (531)
+.++ .+|++++.||..|.++|++|..+++||+++|..... +.. +-|.. -...++||||+|+
T Consensus 164 ~~v~-~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaal 240 (424)
T smart00825 164 VTVD-TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVV 240 (424)
T ss_pred cccc-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEE
Confidence 9999 599999999999999999999999999999974320 110 11111 1356889999999
Q ss_pred EEeeCCC
Q 009598 317 LLSNKAR 323 (531)
Q Consensus 317 LLs~~~~ 323 (531)
||++.+.
T Consensus 241 VLe~~e~ 247 (424)
T smart00825 241 VLKRLSD 247 (424)
T ss_pred EEccHHH
Confidence 9997543
No 57
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.29 E-value=1.8e-10 Score=117.65 Aligned_cols=116 Identities=16% Similarity=0.255 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKAN 277 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~ 277 (531)
-.+|+.+|+++||+++|++++|||.+++.+......|+ ..++++||++ .++|.+ +||++..||.+|..++++|
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG 126 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSG 126 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999999876666675 4899999964 599996 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC---CCCC----CCCccccccccccccceEEEEEeeCC
Q 009598 278 PNSYAVVVSTENITQ---NWYS----GNDRSMLLCNCLFRMGGAAVLLSNKA 322 (531)
Q Consensus 278 ~~~~aLVVstE~~S~---~~~~----~~dr~~ll~~~lfgDGAaAvLLs~~~ 322 (531)
..++|||+++--.+. .|.. |..|.. +...---||+|+||+++.
T Consensus 127 ~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~ 176 (334)
T PRK12404 127 GAKYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTG 176 (334)
T ss_pred CCCEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCC
Confidence 999999998765442 2322 233431 334446799999999764
No 58
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.25 E-value=4.4e-10 Score=119.97 Aligned_cols=123 Identities=11% Similarity=0.085 Sum_probs=90.2
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCC-cC----EEEEeecCC-----------------------CCC--CcHHHHHHHHcCC
Q 009598 197 EADEVMFGALDSLFEKTGVEPSD-VG----ILIVNCSLF-----------------------NPV--PSLSSMIVNHYKL 246 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~d-ID----~LI~~ss~~-----------------------~~~--Ps~a~~I~~~LGl 246 (531)
....++..|++++|+++|+++++ ++ .+++.++.. ... ...+..|...+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 46789999999999999998766 33 233333210 111 4567889999999
Q ss_pred CCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC--------------C------CCCCCCccccccc
Q 009598 247 RDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQ--------------N------WYSGNDRSMLLCN 306 (531)
Q Consensus 247 ~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~--------------~------~~~~~dr~~ll~~ 306 (531)
+ .-.++.+. .+|++++.||..|.++|+.|..+.+||+++|..+. . ...+-|+. -..
T Consensus 151 ~-~Gp~~tv~-~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~--~~G 226 (407)
T cd00828 151 S-HGPIKTPV-GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDET--RDG 226 (407)
T ss_pred C-CCCCcCcc-cHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCC--CCc
Confidence 3 24789999 49999999999999999999999999999998651 0 00011111 024
Q ss_pred cccccceEEEEEeeCCC
Q 009598 307 CLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 307 ~lfgDGAaAvLLs~~~~ 323 (531)
+++||||+|+||++.+.
T Consensus 227 ~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 227 FVEAEGAGVLVLERAEL 243 (407)
T ss_pred EEeecceEEEEEeeHHH
Confidence 68899999999998654
No 59
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.22 E-value=1.2e-09 Score=116.56 Aligned_cols=185 Identities=11% Similarity=0.072 Sum_probs=114.4
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccC-CCCHHhHHHHHHHHHHcCCCeEE--eecC---CCcCCCCCcchhhhh
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESS-FFQEESLQFQKRIASRASVGDET--YLSR---GITSRPPNICIHEAR 195 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~er~--~~~~---~~~~~~~~~~l~~~~ 195 (531)
++|.|+++|+..|.- .+.+++.+.+..-. .+.+-. + ++..+...+. ..+. ..+ .++ .-....
T Consensus 1 ~~v~ItG~g~~~p~g---~~~~~~~~~l~~g~s~~~~~~-----~-~~~~~~~~~~~g~i~~f~~~~~-~~~--~~~~~~ 68 (407)
T TIGR03150 1 RRVVVTGLGAVTPLG---NGVEEFWENLLAGKSGIGPIT-----R-FDASDLPVKIAGEVKDFDPEDY-IDK--KEARRM 68 (407)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHcCCCeeEECC-----c-ccccCCCCcEEEEeCCcChhhc-CCH--HHHhhc
Confidence 478999999999983 57788887665310 011000 0 0001111110 1110 000 111 000111
Q ss_pred hcHHHHHHHHHHHHHHhcCCCCCCcCE----EEEeecCC------------------CC--------CC-cHHHHHHHHc
Q 009598 196 VEADEVMFGALDSLFEKTGVEPSDVGI----LIVNCSLF------------------NP--------VP-SLSSMIVNHY 244 (531)
Q Consensus 196 ~ea~~la~~Aa~~aL~~agi~p~dID~----LI~~ss~~------------------~~--------~P-s~a~~I~~~L 244 (531)
....+++..|++++|+++|+++++||. +++.++.. .. .+ ..+..|...+
T Consensus 69 ~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (407)
T TIGR03150 69 DRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRY 148 (407)
T ss_pred CHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHh
Confidence 235789999999999999999999886 55544211 00 11 2456788899
Q ss_pred CCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC----------CC---C--------CCCcccc
Q 009598 245 KLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQN----------WY---S--------GNDRSML 303 (531)
Q Consensus 245 Gl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~----------~~---~--------~~dr~~l 303 (531)
|++ ..++.+. .+|++++.||..|.++|++|..+.+||++.|..... .. . +-|..
T Consensus 149 gl~--g~~~~v~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~-- 223 (407)
T TIGR03150 149 GAK--GPNHAVV-TACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD-- 223 (407)
T ss_pred CCC--Ccccccc-cHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC--
Confidence 995 5788888 499999999999999999999999999999963210 00 0 00111
Q ss_pred ccccccccceEEEEEeeCCC
Q 009598 304 LCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 304 l~~~lfgDGAaAvLLs~~~~ 323 (531)
-...+.||||+|+||++.+.
T Consensus 224 ~~g~~~gEGAaalvL~~~~~ 243 (407)
T TIGR03150 224 RDGFVMGEGAGVLVLEELEH 243 (407)
T ss_pred CCcEEEeceEEEEEEeeHHH
Confidence 02357899999999997653
No 60
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.21 E-value=4e-09 Score=113.71 Aligned_cols=182 Identities=12% Similarity=0.155 Sum_probs=112.6
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCC-CCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHH
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSF-FQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADE 200 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~-~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~ 200 (531)
.+|.|.++|+-.|- -.+.+++.+.+..-.. +.+- .+ +...++..+....-+. .++.. +. .......
T Consensus 11 ~~VvITG~G~vs~~---G~~~~~~~~~L~~G~s~i~~~-----~~-~~~~~~~~~~~g~~~~--~~~~~-~~-~~~~~~~ 77 (425)
T PRK06501 11 PIVAVTGMGVVTSL---GQGKADNWAALTAGESGIHTI-----TR-FPTEGLRTRIAGTVDF--LPESP-FG-ASALSEA 77 (425)
T ss_pred cCEEEEeeeEECCC---CCCHHHHHHHHHcCCCceEcC-----Cc-ccccCCCCceEEEEee--ccccc-cc-ccCHHHH
Confidence 36999999999987 3577888876653110 0000 00 0011111111000000 00100 00 0112467
Q ss_pred HHHHHHHHHHHhcCCCCCCcC------------------EEEEeec----------------CCC-------CCCcHHHH
Q 009598 201 VMFGALDSLFEKTGVEPSDVG------------------ILIVNCS----------------LFN-------PVPSLSSM 239 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID------------------~LI~~ss----------------~~~-------~~Ps~a~~ 239 (531)
++..|++++|+++|+++.+.+ .++..+. +.. ..|+.+..
T Consensus 78 ~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 157 (425)
T PRK06501 78 LARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADR 157 (425)
T ss_pred HHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHH
Confidence 889999999999999654422 1111111 111 35678999
Q ss_pred HHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecc---------------CCCCC-------CC-
Q 009598 240 IVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTEN---------------ITQNW-------YS- 296 (531)
Q Consensus 240 I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~---------------~S~~~-------~~- 296 (531)
|+.++|++ ..+++++ .+|++++.||..|.++|+++..+++||+++|. ++..- ..
T Consensus 158 i~~~~gl~--G~~~~i~-~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpf 234 (425)
T PRK06501 158 LADRFGTR--GLPISLS-TACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPF 234 (425)
T ss_pred HHHHhCCC--CCceeec-CccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCC
Confidence 99999996 5789999 59999999999999999999999999999993 22100 00
Q ss_pred CCCccccccccccccceEEEEEeeCCC
Q 009598 297 GNDRSMLLCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 297 ~~dr~~ll~~~lfgDGAaAvLLs~~~~ 323 (531)
..+|+ ..++||||+|+||++.+.
T Consensus 235 d~~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 235 SKDRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCCCC----CeeeeccEEEEEECcHHH
Confidence 02333 378999999999997543
No 61
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.19 E-value=3.2e-09 Score=113.48 Aligned_cols=121 Identities=17% Similarity=0.202 Sum_probs=92.5
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCE----EEEeec-CCC-------------------CCCcHHHHHHHHcCCCCCcee
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGI----LIVNCS-LFN-------------------PVPSLSSMIVNHYKLRDDIKT 252 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~----LI~~ss-~~~-------------------~~Ps~a~~I~~~LGl~~~~~~ 252 (531)
....|+..|++++|+++|++++++|. ++++++ .++ ..+..+..|...+|++ ..+
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 36789999999999999999888774 555543 111 1245678899999996 378
Q ss_pred EEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC-----------------CCCCCCccccccccccccceEE
Q 009598 253 YNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQN-----------------WYSGNDRSMLLCNCLFRMGGAA 315 (531)
Q Consensus 253 fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~-----------------~~~~~dr~~ll~~~lfgDGAaA 315 (531)
+.+.+ +|++++.||..|.++|++|..+.+||+++|..+.. ......+. ...++||||+|
T Consensus 164 ~~v~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~---~g~~~geGAaa 239 (421)
T cd00833 164 LTVDT-ACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADA---DGYVRGEGVGV 239 (421)
T ss_pred eeecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCC---CCeeeeceEEE
Confidence 99994 99999999999999999999999999999975310 01111111 24689999999
Q ss_pred EEEeeCCC
Q 009598 316 VLLSNKAR 323 (531)
Q Consensus 316 vLLs~~~~ 323 (531)
+||++.+.
T Consensus 240 lvL~~~~~ 247 (421)
T cd00833 240 VVLKRLSD 247 (421)
T ss_pred EEEeeHHH
Confidence 99997553
No 62
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.18 E-value=1.2e-09 Score=116.67 Aligned_cols=91 Identities=15% Similarity=0.340 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCC---CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNP---VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~---~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~l 273 (531)
..+|+.+|++++|+++|++|+|||.+|+++. +.+. .++....+...++ .++++++++ ++|++++.++..|.++
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~ 108 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAME 108 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHH
Confidence 6899999999999999999999999998864 3332 2344455666665 468999999 6999999999999999
Q ss_pred HHcCCCCeEEEEEeccCC
Q 009598 274 LKANPNSYAVVVSTENIT 291 (531)
Q Consensus 274 L~~~~~~~aLVVstE~~S 291 (531)
+++|..+++||+++|.+|
T Consensus 109 I~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 109 IATGMADIVIAGGVEHMT 126 (394)
T ss_pred HHcCCCCEEEEeeecccc
Confidence 999999999999999766
No 63
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.14 E-value=2.7e-09 Score=114.17 Aligned_cols=95 Identities=19% Similarity=0.206 Sum_probs=87.2
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCC--CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNP--VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~--~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
.+.+|+..+++.+|+++|++|++||-||+.|..... .+.++.++.-+-||+.++.++.|+ +.|++++.|+.+|.+.+
T Consensus 28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I 106 (417)
T PRK06025 28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQI 106 (417)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHH
Confidence 479999999999999999999999999999763322 478899999999999899999999 79999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 009598 275 KANPNSYAVVVSTENITQ 292 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~ 292 (531)
++|..+.+|..+.|.+|+
T Consensus 107 ~~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 107 MSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999995
No 64
>PRK06158 thiolase; Provisional
Probab=99.12 E-value=8.3e-09 Score=109.89 Aligned_cols=87 Identities=17% Similarity=0.108 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKAN 277 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~ 277 (531)
..+|+.+|++++|+++|++++|||.+|+++. +...|+ ..+++++|++ ..+++++. .||+++..++..|..++++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999998753 233443 5799999997 57889998 59999999999999999999
Q ss_pred CCCeEEEE-Eecc
Q 009598 278 PNSYAVVV-STEN 289 (531)
Q Consensus 278 ~~~~aLVV-stE~ 289 (531)
..++|||+ +.|.
T Consensus 103 ~~d~vLV~~g~~~ 115 (384)
T PRK06158 103 LCDVALICYGSNQ 115 (384)
T ss_pred CCCEEEEeecccc
Confidence 99999998 4443
No 65
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.11 E-value=2.9e-10 Score=121.04 Aligned_cols=95 Identities=17% Similarity=0.313 Sum_probs=85.5
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
...+|+.+|++++|+++|++++|||.+|+++. ++...|..+..++.++|++.++.+|+++ .+|++++.++.+|.++++
T Consensus 20 t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~ 98 (386)
T TIGR01930 20 SAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIR 98 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHH
Confidence 46899999999999999999999999998764 4554577788899999998668999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+++||+++|.+|.
T Consensus 99 sG~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 99 AGEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCCEEEEEEehhhcc
Confidence 99999999999998775
No 66
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.11 E-value=5e-09 Score=110.55 Aligned_cols=91 Identities=16% Similarity=0.199 Sum_probs=77.9
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
.+.+|+..|++++++ |++ +|||.+|+.+.... .+..+..+....|++..+.++.++ .+|++++.|+..|.+.+++
T Consensus 24 ~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~s 98 (361)
T PRK06690 24 EVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQG 98 (361)
T ss_pred CHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHC
Confidence 368999999999866 896 89999999864321 244555688999998679999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009598 277 NPNSYAVVVSTENITQ 292 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~ 292 (531)
|..+.+||++.|.+|.
T Consensus 99 G~~d~~l~gG~E~ms~ 114 (361)
T PRK06690 99 GAGKCYIAGGVESTST 114 (361)
T ss_pred CCCCEEEEeccccccC
Confidence 9999999999999874
No 67
>PRK08256 lipid-transfer protein; Provisional
Probab=99.10 E-value=9.7e-09 Score=109.58 Aligned_cols=89 Identities=15% Similarity=0.185 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|+..|++++|+++|++++|||.+++.+. .+... ...++..+|++ ++++++++ .+|++++.+|..|.+++++
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~s 96 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRS 96 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999988754 22211 23467789996 67889999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCC
Q 009598 277 NPNSYAVVVSTENIT 291 (531)
Q Consensus 277 ~~~~~aLVVstE~~S 291 (531)
|..+++||+++|.++
T Consensus 97 G~~d~vLv~g~e~~s 111 (391)
T PRK08256 97 GAADCALALGFEQMQ 111 (391)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999865
No 68
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.09 E-value=2.2e-08 Score=107.23 Aligned_cols=185 Identities=11% Similarity=0.051 Sum_probs=115.2
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccC-CCCHHhHHHHHHHHHHcCCCeEE--eecCCC--cCCCCCcchhhhhh
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESS-FFQEESLQFQKRIASRASVGDET--YLSRGI--TSRPPNICIHEARV 196 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~er~--~~~~~~--~~~~~~~~l~~~~~ 196 (531)
++|.|+++||..|- -.+.+++.+.+..-. .+.+-. + +...+...+. .+++.. ...++. . .....
T Consensus 2 ~~v~ItG~g~~~p~---g~~~~~~w~~l~~g~~~~~~~~-----~-~~~~~~~~~~~g~i~~f~~~~~~~~~-~-~~~~~ 70 (411)
T PRK07314 2 RRVVVTGLGAVSPL---GNDVESTWKNLLAGKSGIGPIT-----H-FDTSDLAVKIAGEVKDFNPDDYMSRK-E-ARRMD 70 (411)
T ss_pred CcEEEEcceEECCC---cCCHHHHHHHHHhCCCcEEECC-----c-ccccCCCccEEEEeCCcChhhcCCHH-H-hhcCC
Confidence 57999999999997 367788887665310 000000 0 0001111110 111100 001110 0 01112
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcC----EEEEeecCC------------------C--------CCC-cHHHHHHHHcC
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVG----ILIVNCSLF------------------N--------PVP-SLSSMIVNHYK 245 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~~------------------~--------~~P-s~a~~I~~~LG 245 (531)
....|+..|++++|+++|++++++| .++++++.. . ..+ ..+..|...+|
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (411)
T PRK07314 71 RFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG 150 (411)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC
Confidence 3578899999999999999999888 455554311 0 111 24567899999
Q ss_pred CCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC---------------------CCCCCccccc
Q 009598 246 LRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQNW---------------------YSGNDRSMLL 304 (531)
Q Consensus 246 l~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~---------------------~~~~dr~~ll 304 (531)
++ -.++-+. .+|++++.||..|.++|++|..+.|||.+.|.....+ ..+-|+..
T Consensus 151 l~--Gp~~tv~-~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~-- 225 (411)
T PRK07314 151 AK--GPNHSIV-TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR-- 225 (411)
T ss_pred CC--Cccccch-hhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC--
Confidence 96 3678888 4999999999999999999999999999998643210 00001110
Q ss_pred cccccccceEEEEEeeCC
Q 009598 305 CNCLFRMGGAAVLLSNKA 322 (531)
Q Consensus 305 ~~~lfgDGAaAvLLs~~~ 322 (531)
..+++||||+|+||++.+
T Consensus 226 dG~~~geGAaavvL~~~~ 243 (411)
T PRK07314 226 DGFVMGEGAGILVLEELE 243 (411)
T ss_pred CCEeEEceEEEEEEeeHH
Confidence 246889999999999754
No 69
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.06 E-value=6.8e-10 Score=118.43 Aligned_cols=94 Identities=19% Similarity=0.241 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCc-HHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPS-LSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps-~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
+.+|+..|++++|+++|++|+|||.+|+++ .++...|+ .+..+..++|++.++++++++ .+|++++.||.+|.++++
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 689999999999999999999999999986 45555554 888999999998779999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999985
No 70
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.04 E-value=1.2e-08 Score=109.45 Aligned_cols=121 Identities=13% Similarity=0.256 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHhcCCC---CCCcCEEEEeec----------------CCCCCC---------cHHHHHHHHcCCCCC
Q 009598 198 ADEVMFGALDSLFEKTGVE---PSDVGILIVNCS----------------LFNPVP---------SLSSMIVNHYKLRDD 249 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~---p~dID~LI~~ss----------------~~~~~P---------s~a~~I~~~LGl~~~ 249 (531)
...++..|++++|+++|++ +++|++++-++. +.+..| ..+..|+..||++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 6789999999999999986 466777664432 111122 2567788999996
Q ss_pred ceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecc-CCCC---------C-------------CCCCCccccccc
Q 009598 250 IKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTEN-ITQN---------W-------------YSGNDRSMLLCN 306 (531)
Q Consensus 250 ~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~-~S~~---------~-------------~~~~dr~~ll~~ 306 (531)
-.++.+++ +|++++.||..|.++|+++..+.|||+++|. ++.. . ..+-|+. -..
T Consensus 158 G~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~--~dG 234 (410)
T PRK07103 158 GEGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQD--RDG 234 (410)
T ss_pred CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCC--CCC
Confidence 36788995 9999999999999999999999999999864 2110 0 0000111 024
Q ss_pred cccccceEEEEEeeCCC
Q 009598 307 CLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 307 ~lfgDGAaAvLLs~~~~ 323 (531)
.++||||+|+||++.+.
T Consensus 235 ~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 235 FIYGEACGAVVLESAES 251 (410)
T ss_pred eeEeeeEEEEEEccHHH
Confidence 68899999999997543
No 71
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.04 E-value=7.5e-10 Score=118.59 Aligned_cols=94 Identities=17% Similarity=0.308 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|+.+|++++|+++|++|+|||.+|++++ +....|.++..++..+|+++++++++++ .+|++++.|+..|.+++++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQT 104 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999874 5566788888999999998678999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009598 277 NPNSYAVVVSTENITQ 292 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~ 292 (531)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 105 GAADVVIAGGAESMSN 120 (404)
T ss_pred CCCCEEEEeeehhhcc
Confidence 9999999999999885
No 72
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.03 E-value=1e-09 Score=117.17 Aligned_cols=95 Identities=20% Similarity=0.220 Sum_probs=83.7
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
...+|+.+|++++|+++|++|+|||.+|+++. +....+..+..++..+|++.++++++++ .+|++|+.|+..|.++++
T Consensus 25 ~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~ 103 (393)
T PRK08235 25 KATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999874 3212345556789999997679999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+++||+++|.+|.
T Consensus 104 sG~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 104 AGDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999885
No 73
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.03 E-value=2.4e-08 Score=106.68 Aligned_cols=93 Identities=19% Similarity=0.200 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC-CCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLF-NPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|+.+|++++|+++|++++|||.+|+++... ...+..+..++..+|++.+++++.++ .+|++++.++..|.+.+++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHc
Confidence 689999999999999999999999999875321 21334556688999997668899999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCC
Q 009598 277 NPNSYAVVVSTENIT 291 (531)
Q Consensus 277 ~~~~~aLVVstE~~S 291 (531)
|..+.+||++.|.+|
T Consensus 104 G~~d~vlv~G~E~~s 118 (394)
T PLN02644 104 GINDVVVAGGMESMS 118 (394)
T ss_pred CCCCEEEEEeEEecC
Confidence 999999999988775
No 74
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.01 E-value=1.6e-09 Score=115.75 Aligned_cols=95 Identities=15% Similarity=0.317 Sum_probs=84.0
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCC-CcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPV-PSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~-Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
.+.+|+..|++++|+++|++|+|||.+|++|. +.... +..+.......|++.++.+++|+ .+|++|+.||.+|.+++
T Consensus 27 ~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I 105 (402)
T PRK08242 27 KPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKV 105 (402)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHH
Confidence 37899999999999999999999999999874 44333 34566677888997679999999 69999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 009598 275 KANPNSYAVVVSTENITQ 292 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~ 292 (531)
++|..+++||+++|.+|.
T Consensus 106 ~sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 106 RSGWDDLVIAGGVESMSR 123 (402)
T ss_pred HcCCCCEEEEEEEEccCC
Confidence 999999999999999986
No 75
>PRK06059 lipid-transfer protein; Provisional
Probab=98.97 E-value=2e-09 Score=115.06 Aligned_cols=93 Identities=14% Similarity=0.107 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-C-CCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-L-FNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~-~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
..+|+.+|++++|+++|++++|||.||++++ + .+..|..+..+++++|++ ++.+++++ .+|++++.+|..|.++++
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSY-AACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceeccc-chhHHHHHHHHHHHHHHH
Confidence 5889999999999999999999999998754 2 344456678999999997 68899999 499999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
++..++||||++|.++.
T Consensus 101 sG~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 101 AGLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCCEEEEEEEcccCC
Confidence 99999999999998763
No 76
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.97 E-value=1.5e-07 Score=101.41 Aligned_cols=120 Identities=17% Similarity=0.224 Sum_probs=87.1
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCc-C----EEEEeecCC----------------------CCCC-----cHHHHHHHHc
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDV-G----ILIVNCSLF----------------------NPVP-----SLSSMIVNHY 244 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dI-D----~LI~~ss~~----------------------~~~P-----s~a~~I~~~L 244 (531)
....++..|++++|+++|++++++ + .+++.++.. +..| ..+.+|...|
T Consensus 81 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 160 (424)
T PRK06333 81 RFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRY 160 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHh
Confidence 356789999999999999988776 3 344444311 0011 2366788999
Q ss_pred CCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC----------CC------------C--CCc
Q 009598 245 KLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQNW----------YS------------G--NDR 300 (531)
Q Consensus 245 Gl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~----------~~------------~--~dr 300 (531)
|++ -+++.++ .+|++++.||..|.++|++|..+.+||+++|.....+ +. + .++
T Consensus 161 gl~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~ 237 (424)
T PRK06333 161 GFK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDR 237 (424)
T ss_pred CCC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCC
Confidence 996 5778888 5999999999999999999999999999999732100 00 0 112
Q ss_pred cccccccccccceEEEEEeeCCC
Q 009598 301 SMLLCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 301 ~~ll~~~lfgDGAaAvLLs~~~~ 323 (531)
+ ..+.||||+++||++.+.
T Consensus 238 ~----G~~~gEGaa~lvLe~~~~ 256 (424)
T PRK06333 238 D----GFVMGEGAGILVIETLEH 256 (424)
T ss_pred C----CeEEecceEEEEEeeHHH
Confidence 2 356799999999997543
No 77
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.97 E-value=8.2e-08 Score=103.28 Aligned_cols=121 Identities=13% Similarity=0.152 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcC----EEEEeecC-C-----------------CC--------CC-cHHHHHHHHcCC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVG----ILIVNCSL-F-----------------NP--------VP-SLSSMIVNHYKL 246 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~-~-----------------~~--------~P-s~a~~I~~~LGl 246 (531)
...++..|+.++|+++|+++++.+ .+++.++. . .. .| ..+.+|...+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 557889999999999999754433 23444321 0 01 12 367889999999
Q ss_pred CCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC----------CC-----------CCCcccccc
Q 009598 247 RDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQNW----------YS-----------GNDRSMLLC 305 (531)
Q Consensus 247 ~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~----------~~-----------~~dr~~ll~ 305 (531)
+. +++.++ .+|++++.||..|.++|+.+..+.+||+++|.....+ .. +-|+.. .
T Consensus 154 ~G--p~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~--~ 228 (414)
T PRK08722 154 RG--PNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR--D 228 (414)
T ss_pred CC--Cccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC--C
Confidence 74 788899 5999999999999999999999999999999843210 10 001110 2
Q ss_pred ccccccceEEEEEeeCCC
Q 009598 306 NCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 306 ~~lfgDGAaAvLLs~~~~ 323 (531)
..+.|||++++||++...
T Consensus 229 G~~~gEGaaalvLe~~~~ 246 (414)
T PRK08722 229 GFVLGDGAGMMVLEEYEH 246 (414)
T ss_pred ceEeeceEEEEEEccHHH
Confidence 467899999999997543
No 78
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.94 E-value=1.1e-07 Score=102.11 Aligned_cols=119 Identities=16% Similarity=0.180 Sum_probs=88.5
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCE----EEEeecCC--------------------------CCCC-cHHHHHHHHcC
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGI----LIVNCSLF--------------------------NPVP-SLSSMIVNHYK 245 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~----LI~~ss~~--------------------------~~~P-s~a~~I~~~LG 245 (531)
....++..|++++|+++|++++++|. +++.++.. ...| ..+..|...+|
T Consensus 71 ~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (406)
T PRK08439 71 RFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHG 150 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhC
Confidence 46789999999999999999887763 33333210 0112 46778999999
Q ss_pred CCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CCC---------CC-----------CC--CCccc
Q 009598 246 LRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENI-TQN---------WY-----------SG--NDRSM 302 (531)
Q Consensus 246 l~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~-S~~---------~~-----------~~--~dr~~ 302 (531)
++. .++.+. .+|++++.||..|.++|+.|..+.+||+++|.. +.. .. .+ .+++
T Consensus 151 l~G--p~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~- 226 (406)
T PRK08439 151 LKG--PNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRD- 226 (406)
T ss_pred CCC--Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCC-
Confidence 984 678888 599999999999999999999999999999962 210 00 00 1222
Q ss_pred cccccccccceEEEEEeeCC
Q 009598 303 LLCNCLFRMGGAAVLLSNKA 322 (531)
Q Consensus 303 ll~~~lfgDGAaAvLLs~~~ 322 (531)
..++|+||+++||++.+
T Consensus 227 ---G~v~gEGa~~lvLe~~~ 243 (406)
T PRK08439 227 ---GFVMGEGAGALVLEEYE 243 (406)
T ss_pred ---cEEeeCceEEEEEccHH
Confidence 46789999999999754
No 79
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.93 E-value=4.2e-09 Score=113.61 Aligned_cols=94 Identities=12% Similarity=0.304 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|+.+|++++|+++|++++|||.+|+++. +....+..+..++..+|++.++.+++++ .+|++++.++..|.+++++
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~s 105 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIAL 105 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999998764 3333467788899999997578999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009598 277 NPNSYAVVVSTENITQ 292 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~ 292 (531)
|..+++||+++|.+|.
T Consensus 106 G~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 106 GRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999998775
No 80
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.90 E-value=6.2e-09 Score=111.19 Aligned_cols=94 Identities=16% Similarity=0.156 Sum_probs=82.2
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHH-HHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSM-IVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~-I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
.+.+++..|++++|+++|++|+|||.+|++++ +++..+..+.. +++.+|+. ++.+++++ .+|++++.|+..|.+++
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I 99 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLI 99 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999875 44434555553 67888886 79999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 009598 275 KANPNSYAVVVSTENITQ 292 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~ 292 (531)
+++..+.+||+++|.+|.
T Consensus 100 ~sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 100 AGGDANCILAGGFEKMET 117 (393)
T ss_pred HCCCCCEEEEEeeecccc
Confidence 999999999999999875
No 81
>PRK05790 putative acyltransferase; Provisional
Probab=98.88 E-value=8.6e-09 Score=110.01 Aligned_cols=95 Identities=19% Similarity=0.251 Sum_probs=81.1
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
...+|+.+|++++|+++|++|+|||.+|+++. +....+..+..++..+|++.++.+++++ .+|++++.+|..|.++++
T Consensus 25 ~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~ 103 (393)
T PRK05790 25 SAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHH
Confidence 36899999999999999999999999998763 3222344555677788997568899999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+++||++.|.+|.
T Consensus 104 sG~~d~vLv~G~e~~s~ 120 (393)
T PRK05790 104 AGDADIVVAGGQESMSQ 120 (393)
T ss_pred cCCCCEEEEEeeecccc
Confidence 99999999999998753
No 82
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=98.87 E-value=9.2e-09 Score=110.00 Aligned_cols=94 Identities=16% Similarity=0.242 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|+.+|++++|+++|++|+|||.+|++++ +.....+.+......+|++.++++++++ .+|++|+.|+..|.+++++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999999864 3333344444455567777679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009598 277 NPNSYAVVVSTENITQ 292 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~ 292 (531)
|..+.+||++.|.+|.
T Consensus 110 G~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 110 GSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCEEEEEeeeccCC
Confidence 9999999999999884
No 83
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.84 E-value=1.4e-08 Score=108.46 Aligned_cols=91 Identities=11% Similarity=0.130 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCC--CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNP--VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~--~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
..+|+.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.+|+. +.+++++. .||+++..++..|...++
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~-~~gasG~~al~~A~~~I~ 106 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVY-VGGATGVMTAIAGWYHVA 106 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEe-cCchhHHHHHHHHHHHHh
Confidence 58899999999999999999999999987644322 566888899999997 58899999 489888999999999999
Q ss_pred cCCCCeEEEEEeccC
Q 009598 276 ANPNSYAVVVSTENI 290 (531)
Q Consensus 276 ~~~~~~aLVVstE~~ 290 (531)
+|..++||||++|..
T Consensus 107 sG~ad~vLVvg~e~~ 121 (392)
T PRK06065 107 SGLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCCEEEEEEeecc
Confidence 999999999999974
No 84
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.83 E-value=3.4e-07 Score=98.26 Aligned_cols=188 Identities=10% Similarity=0.077 Sum_probs=111.7
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCC--cchhhhhhcHH
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPN--ICIHEARVEAD 199 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~--~~l~~~~~ea~ 199 (531)
++|.|.++|+-.|- -.+.+++.+.+.. |. + -++...+.....++..+....-.....+.. ...........
T Consensus 2 ~~VvITG~g~vtp~---G~~~~~~~~~L~~-g~-s--~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~ 74 (405)
T PRK09116 2 RRVVVTGMGGVTAL---GEDWQTIAARLKA-GR-N--AVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVS 74 (405)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CC-C--CEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHH
Confidence 47999999999997 3677888876643 11 0 000000000001222221111000000000 00001112356
Q ss_pred HHHHHHHHHHHHhcCCCC------CCcCEEEEeecC-C-----------------C--------CCC-cHHHHHHHHcCC
Q 009598 200 EVMFGALDSLFEKTGVEP------SDVGILIVNCSL-F-----------------N--------PVP-SLSSMIVNHYKL 246 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p------~dID~LI~~ss~-~-----------------~--------~~P-s~a~~I~~~LGl 246 (531)
.++..|++++|+++|+.. ++++++ +.++. . . ..| ..+..|...||+
T Consensus 75 ~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~-~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 153 (405)
T PRK09116 75 LMATRASELALEDAGLLGDPILTDGRMGIA-YGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL 153 (405)
T ss_pred HHHHHHHHHHHHHcCCCCccccCCCcEEEE-EeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence 789999999999999842 334444 44321 0 0 123 257789999999
Q ss_pred CCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC----C-----C-----------CCCCccccccc
Q 009598 247 RDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQN----W-----Y-----------SGNDRSMLLCN 306 (531)
Q Consensus 247 ~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~----~-----~-----------~~~dr~~ll~~ 306 (531)
+. +++-++. +|++++.||..|.++|+.+..+.+||.++|.++.. + . .+-|+.. ..
T Consensus 154 ~G--p~~ti~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~--~G 228 (405)
T PRK09116 154 KG--RVIPTSS-ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR--DG 228 (405)
T ss_pred CC--Ccccccc-hhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--CC
Confidence 84 7888994 99999999999999999999999999999975420 0 0 0001110 24
Q ss_pred cccccceEEEEEeeCC
Q 009598 307 CLFRMGGAAVLLSNKA 322 (531)
Q Consensus 307 ~lfgDGAaAvLLs~~~ 322 (531)
.+.|+||+++||++.+
T Consensus 229 ~v~gEGa~~~vLe~~~ 244 (405)
T PRK09116 229 LVIGEGAGTLVLEELE 244 (405)
T ss_pred EeeeccEEEEEEccHH
Confidence 6789999999999744
No 85
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.83 E-value=1.7e-08 Score=102.22 Aligned_cols=95 Identities=15% Similarity=0.312 Sum_probs=83.6
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
.+.+|+..|++++|++++++|++||.+|++|. +....+..+..+.-..|++..++++.++ ..|++++.|+..|...++
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~ 103 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIA 103 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhc
Confidence 47899999999999999999999999999974 4444777888888899998889999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+.+|+++.|.+|.
T Consensus 104 sG~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 104 SGEADVVLAGGVESMSR 120 (264)
T ss_dssp TTS-SEEEEEEEEETTT
T ss_pred CCCccEEEEeccccccc
Confidence 99999999999999987
No 86
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.80 E-value=8.5e-07 Score=94.44 Aligned_cols=298 Identities=15% Similarity=0.210 Sum_probs=167.0
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHH
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEV 201 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~l 201 (531)
++|.|.++|+.-|- - . .+++.+.+.. | ++||+.-+-.+ .....+... ..........+
T Consensus 2 ~rVvITG~G~vsp~--G-~-~~~~~~~l~~-G---------------~sgi~~~~~~~-~~~~~~~~~-~~~~~~~~~~~ 59 (381)
T PRK05952 2 MKVVVTGIGLVSAL--G-D-LEQSWQRLLQ-G---------------KSGIKLHQPFP-ELPPLPLGL-IGNQPSSLEDL 59 (381)
T ss_pred CeEEEEeeEEECcc--c-C-HHHHHHHHHc-C---------------CCCeEeCCccc-cccccccee-eccccccccHH
Confidence 47999999999987 3 3 7777765542 1 13443211000 000000000 00000112335
Q ss_pred HHHHHHHHHHhcCCCC--CCcCEEEEeecCC--------------------C--------CCC-cHHHHHHHHcCCCCCc
Q 009598 202 MFGALDSLFEKTGVEP--SDVGILIVNCSLF--------------------N--------PVP-SLSSMIVNHYKLRDDI 250 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p--~dID~LI~~ss~~--------------------~--------~~P-s~a~~I~~~LGl~~~~ 250 (531)
+..|++++|+++|+++ +++++++-.+... . ..| ..+..|...+|++.
T Consensus 60 ~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G-- 137 (381)
T PRK05952 60 TKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG-- 137 (381)
T ss_pred HHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC--
Confidence 6689999999999964 5566555322110 0 122 24677889999974
Q ss_pred eeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecc-CCCC---------------CCCC-CCccccccccccccce
Q 009598 251 KTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTEN-ITQN---------------WYSG-NDRSMLLCNCLFRMGG 313 (531)
Q Consensus 251 ~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~-~S~~---------------~~~~-~dr~~ll~~~lfgDGA 313 (531)
+++.+.+ +|++++.||..|.++|+.+..+.+||.++|. ++.. ..+. .+|+ ..++||||
T Consensus 138 p~~ti~~-aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~----G~v~gEGa 212 (381)
T PRK05952 138 PVLAPMA-ACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQRE----GLVLGEGG 212 (381)
T ss_pred ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCC----CccccccE
Confidence 7888994 9999999999999999999999999999996 4320 0001 1222 46899999
Q ss_pred EEEEEeeCCCCccc-cc-c-eeeeEEEEEecCCCCcccceeeccCCCcccccccchhhHHHhhhhhhccccccCCCccch
Q 009598 314 AAVLLSNKARDRSR-SK-Y-ELVHLVRTHKGADDKHFNCVRQAEDDQGIVGVSLSRDLMAVAGDALKTNITTLGPLVLPW 390 (531)
Q Consensus 314 aAvLLs~~~~~~~~-~~-~-~L~~~v~t~~~~d~~~~~~v~~~ed~~G~~g~~lskdl~~v~g~al~~ni~~lgp~vlp~ 390 (531)
+++||++.+..+++ .+ | ++.+. ...+|+... ..+ +.+ +
T Consensus 213 a~lvLe~~~~A~~rg~~i~a~I~g~---~~~~d~~~~---~~~-----------~~~-----~----------------- 253 (381)
T PRK05952 213 AILVLESAELAQKRGAKIYGQILGF---GLTCDAYHM---SAP-----------EPD-----G----------------- 253 (381)
T ss_pred EEEEEeeHHHHHhCCCceEEEEEEE---EecCCCCCC---CCC-----------CCC-----H-----------------
Confidence 99999976432111 11 2 22221 112222110 000 000 0
Q ss_pred hhhhHHHHHHHHHHHHHh-hccCccccccccccEEEEcCCCHHHHHH-----HHHHcCCCcccccccccccccccccccc
Q 009598 391 IEQFRFFVTLVRRKMFKA-KVKPYIPDFKLAFEHFCIHSGGRAVLDE-----IQKNLQLRDWHMEPSRMTLHRFGNTSSS 464 (531)
Q Consensus 391 se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~Hq~g~~vi~~-----v~~~Lgl~~e~~e~S~~~l~r~GNtsSa 464 (531)
+. .. ...++.++. .+. .+|||++..|..+-..-|. +.+.++ +++. -..+=..+||+.++
T Consensus 254 -~~---~~-~ai~~Al~~agi~------p~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~-v~s~K~~~GH~~~A 318 (381)
T PRK05952 254 -KS---AI-AAIQQCLARSGLT------PEDIDYIHAHGTATRLNDQREANLIQALFP---HRVA-VSSTKGATGHTLGA 318 (381)
T ss_pred -HH---HH-HHHHHHHHHhCCC------HHHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCe-eecchhhhccChHH
Confidence 00 00 011233332 232 3799999999887665544 445554 1221 12233468999999
Q ss_pred hHHHHHHHH---HhcCCCCC---------------------CCEEEEEEeChhHhhheeeeE
Q 009598 465 SLWYELAYT---EGKGRVAR---------------------GDRVWQIAFGSGFKCNSAVWR 502 (531)
Q Consensus 465 Si~~~La~~---~~~gri~~---------------------GD~Vl~i~fGsG~~~~s~v~r 502 (531)
+-.+++..+ +++|.+.| =++++..+||-|-.-.++|++
T Consensus 319 aG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 319 SGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred HHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 877777643 44444322 245777888888776676664
No 87
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.75 E-value=1.6e-06 Score=94.03 Aligned_cols=121 Identities=13% Similarity=0.077 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCC-----CcCEEEEeecCCC------------------C--------CC-cHHHHHHHHcC
Q 009598 198 ADEVMFGALDSLFEKTGVEPS-----DVGILIVNCSLFN------------------P--------VP-SLSSMIVNHYK 245 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~-----dID~LI~~ss~~~------------------~--------~P-s~a~~I~~~LG 245 (531)
...++..|+.++|+++|+++. +...++++++... . .+ ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 567899999999999998542 3455666643110 1 11 24668999999
Q ss_pred CCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC---------------CC-------CCCCCcccc
Q 009598 246 LRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQ---------------NW-------YSGNDRSML 303 (531)
Q Consensus 246 l~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~---------------~~-------~~~~dr~~l 303 (531)
++ -.++-+++ +|++++.||..|.++|++|..+.+||.++|.... .+ ..+-|+..
T Consensus 173 l~--Gp~~tv~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAVT-ACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--CceeceeC-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 87 47888994 9999999999999999999999999999886311 00 00001110
Q ss_pred ccccccccceEEEEEeeCCC
Q 009598 304 LCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 304 l~~~lfgDGAaAvLLs~~~~ 323 (531)
..++.||||+|+||++.+.
T Consensus 249 -~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 -DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred -CCeeeecCEEEEEEeeHHH
Confidence 2467899999999997543
No 88
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=98.75 E-value=4.2e-08 Score=104.76 Aligned_cols=94 Identities=15% Similarity=0.186 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCC-CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNP-VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~-~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
..+|+.+|++++|+++|+.++|||.+|++++ ++.. .|.++.+++..+|++..+++++++ .+|++|+.|+..|...++
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~ 105 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIM 105 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHH
Confidence 6899999999999999988899999999864 3333 477788899999998569999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+.+||++.|.+|.
T Consensus 106 sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 106 LGHSEAVIAGGAESMSL 122 (391)
T ss_pred cCCCCEEEEEEEeeccc
Confidence 99999999999999875
No 89
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.75 E-value=2.4e-06 Score=91.34 Aligned_cols=81 Identities=20% Similarity=0.219 Sum_probs=65.1
Q ss_pred CcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC--------------C-CCC-
Q 009598 234 PSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQN--------------W-YSG- 297 (531)
Q Consensus 234 Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~--------------~-~~~- 297 (531)
++.+..|+..||++. .++.+. .||++++.||..|.++|+++..+.|||+++|..+.. + .+.
T Consensus 137 ~~~a~~ia~~lgl~G--p~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLSG--PAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCCC--Cccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 457888999999973 788899 599999999999999999999999999999965431 0 001
Q ss_pred CCccccccccccccceEEEEEeeC
Q 009598 298 NDRSMLLCNCLFRMGGAAVLLSNK 321 (531)
Q Consensus 298 ~dr~~ll~~~lfgDGAaAvLLs~~ 321 (531)
.+++ ..++|||++++||++.
T Consensus 214 ~~~~----G~~~gEGaa~vVLe~~ 233 (392)
T PRK09185 214 ANRD----GINIGEAAAFFLLERE 233 (392)
T ss_pred CCCC----ccceeceEEEEEEEEc
Confidence 1222 4688999999999987
No 90
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.75 E-value=2.9e-06 Score=90.90 Aligned_cols=118 Identities=15% Similarity=0.150 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcC----EEEEeecC-C-----------------CCCC---------cHHHHHHHHcCC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVG----ILIVNCSL-F-----------------NPVP---------SLSSMIVNHYKL 246 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~-~-----------------~~~P---------s~a~~I~~~LGl 246 (531)
...++..|++++|+++|+++++++ .+++.++. . ...| ..+..|...+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 567899999999999999876543 23444321 1 0111 246789999999
Q ss_pred CCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC----------CCC-----------C-CCccccc
Q 009598 247 RDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQN----------WYS-----------G-NDRSMLL 304 (531)
Q Consensus 247 ~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~----------~~~-----------~-~dr~~ll 304 (531)
+. .++-++ .+|++++.||..|.++|+.+. +.+||.++|..... ... . .++
T Consensus 151 ~G--p~~ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~---- 222 (399)
T cd00832 151 RG--PSGVVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA---- 222 (399)
T ss_pred CC--Cccccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC----
Confidence 74 778888 499999999999999999999 99999999873210 000 0 012
Q ss_pred cccccccceEEEEEeeCCC
Q 009598 305 CNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 305 ~~~lfgDGAaAvLLs~~~~ 323 (531)
...+.|+||+++||++.+.
T Consensus 223 ~G~~~gEGa~~lvLe~~~~ 241 (399)
T cd00832 223 AGYVPGEGGAILVLEDAAA 241 (399)
T ss_pred CCEeeeceEEEEEEeeHHH
Confidence 2467899999999997654
No 91
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.73 E-value=4.2e-06 Score=92.76 Aligned_cols=117 Identities=14% Similarity=0.181 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCC--------CcCEEEEeecC-C------------------CC------CC-cHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPS--------DVGILIVNCSL-F------------------NP------VP-SLSSMIVNH 243 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~--------dID~LI~~ss~-~------------------~~------~P-s~a~~I~~~ 243 (531)
...++..|++++|+++|++++ .++ |++.++. . .+ .+ ..+.+|...
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~G-V~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCG-VLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceE-EEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 557889999999999999764 233 4444431 0 00 11 235778999
Q ss_pred cCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CCC----------C---C-------CC--CCc
Q 009598 244 YKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENI-TQN----------W---Y-------SG--NDR 300 (531)
Q Consensus 244 LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~-S~~----------~---~-------~~--~dr 300 (531)
+|++ -.++.+++ +|++++.||..|.++|+.|..+.+||.++|.. +.. . . .+ .+|
T Consensus 278 ~gl~--Gp~~tist-ACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r 354 (540)
T PLN02787 278 LGWM--GPNYSIST-ACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR 354 (540)
T ss_pred hCCC--CCcccccc-ccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC
Confidence 9997 47888994 99999999999999999999999999999962 210 0 0 00 122
Q ss_pred cccccccccccceEEEEEeeCC
Q 009598 301 SMLLCNCLFRMGGAAVLLSNKA 322 (531)
Q Consensus 301 ~~ll~~~lfgDGAaAvLLs~~~ 322 (531)
+ ..++|+||+++||++.+
T Consensus 355 d----Gfv~GEGAa~lVLE~~e 372 (540)
T PLN02787 355 D----GFVMGEGAGVLLLEELE 372 (540)
T ss_pred C----CcccccceEEEEEeeHH
Confidence 2 46789999999999754
No 92
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.73 E-value=1e-06 Score=94.97 Aligned_cols=119 Identities=13% Similarity=0.176 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHhcCCC-CCCcCE----EEEeecCCC------------------C--------CC-cHHHHHHHHcC
Q 009598 198 ADEVMFGALDSLFEKTGVE-PSDVGI----LIVNCSLFN------------------P--------VP-SLSSMIVNHYK 245 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~-p~dID~----LI~~ss~~~------------------~--------~P-s~a~~I~~~LG 245 (531)
..+++..|++++|+++|++ +++++. +++.++... . .+ ..+..|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 5789999999999999998 666653 233322110 0 11 24667888899
Q ss_pred CCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC---------------CC-C--------CCCcc
Q 009598 246 LRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQN---------------WY-S--------GNDRS 301 (531)
Q Consensus 246 l~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~---------------~~-~--------~~dr~ 301 (531)
++. .++.++ .+|++++.||..|.++|++|..+.+||.++|..... +. . ..++
T Consensus 157 l~G--p~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~- 232 (421)
T PTZ00050 157 LKG--PSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR- 232 (421)
T ss_pred CCC--cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC-
Confidence 973 778899 599999999999999999999999999999963210 00 0 0112
Q ss_pred ccccccccccceEEEEEeeCCC
Q 009598 302 MLLCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 302 ~ll~~~lfgDGAaAvLLs~~~~ 323 (531)
...+.||||+|+||++.+.
T Consensus 233 ---~G~~~gEGAaalvLe~~~~ 251 (421)
T PTZ00050 233 ---AGFVMGEGAGILVLEELEH 251 (421)
T ss_pred ---CCEeeccceEEEEEeeHHH
Confidence 2467899999999997653
No 93
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.73 E-value=2.4e-06 Score=94.04 Aligned_cols=92 Identities=13% Similarity=0.085 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHhcCCC--CCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVE--PSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~--p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
..+|+.+|++++|+++|++ ++|||.+++..............+++++|+.+ ....... .||+++..++..|...++
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHH
Confidence 5789999999999999999 99999998754321122234578999999974 4555555 689899999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 009598 276 ANPNSYAVVVSTENIT 291 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S 291 (531)
+|..+.|||+++|.++
T Consensus 105 sG~advVLv~G~E~~~ 120 (498)
T PRK08257 105 AGEADVALVAGAEAQS 120 (498)
T ss_pred CCCCCEEEEeeeeecc
Confidence 9999999999999753
No 94
>PLN02287 3-ketoacyl-CoA thiolase
Probab=98.70 E-value=7.6e-08 Score=104.47 Aligned_cols=95 Identities=21% Similarity=0.302 Sum_probs=82.1
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCc-HHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPS-LSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps-~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
...+|+.+|++++|+++|++++|||.+|+++. .....+. .+.++...+|+++.+.+++++ .+|++++.|+..|.+.+
T Consensus 70 s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I 148 (452)
T PLN02287 70 YPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAI 148 (452)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHH
Confidence 36899999999999999999999999998864 4444444 445666778998668999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 009598 275 KANPNSYAVVVSTENITQ 292 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~ 292 (531)
++|..+.|||++.|.+|.
T Consensus 149 ~sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 149 KAGFYDIGIGAGVESMTT 166 (452)
T ss_pred HcCCCCeEEEEeEEecCC
Confidence 999999999999998875
No 95
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.69 E-value=7.4e-08 Score=102.76 Aligned_cols=93 Identities=15% Similarity=0.161 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CC--CCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSL-FN--PVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~--~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
..+|+.+|++++|+++|++++|||.+|++++. .. ..+..+..+...+|++ ++.+++++ ++|++++.||..|.+++
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I 99 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAI 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHH
Confidence 68899999999999999999999999987642 21 1111122334466876 78899999 69999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 009598 275 KANPNSYAVVVSTENITQ 292 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~ 292 (531)
++|..+++||++.|.+|.
T Consensus 100 ~sG~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 100 EAGRARIVLVVGAEKMTA 117 (389)
T ss_pred HCCCCCEEEEEEehhhcc
Confidence 999999999999998663
No 96
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.69 E-value=6.3e-08 Score=104.57 Aligned_cols=94 Identities=12% Similarity=0.226 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCC-CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNP-VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~-~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|+.+|++++|+++|++|++||.+|+++..... .+.++.+++...|++..++++.++ .+|++++.|+..|...+++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHC
Confidence 68999999999999999999999999999753222 355677799999998669999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009598 277 NPNSYAVVVSTENITQ 292 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~ 292 (531)
|..+.+||++.|.+|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999999885
No 97
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.67 E-value=1.1e-07 Score=101.84 Aligned_cols=95 Identities=16% Similarity=0.249 Sum_probs=85.7
Q ss_pred cHHHHHHHHHHHHHHhc-CCCCCCcCEEEEeecC--CCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKT-GVEPSDVGILIVNCSL--FNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~a-gi~p~dID~LI~~ss~--~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~l 273 (531)
.+.+|+..|++++|+|. |++|+|||.+|+.+.. ....+..+.++..+.|++.+++++.++ +.|++++.|+.+|.+.
T Consensus 25 ~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~ 103 (400)
T PRK13359 25 RADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARA 103 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHH
Confidence 36899999999999974 9999999999998753 222378889999999999789999999 6999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 009598 274 LKANPNSYAVVVSTENITQ 292 (531)
Q Consensus 274 L~~~~~~~aLVVstE~~S~ 292 (531)
+++|..+.+|+++.|.+|.
T Consensus 104 I~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 104 IKSGEAALMIAGGVESMSR 122 (400)
T ss_pred HHcCCCCEEEEeeeeccCC
Confidence 9999999999999999986
No 98
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.67 E-value=9.8e-08 Score=102.44 Aligned_cols=93 Identities=14% Similarity=0.266 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHhc-CCCCCCcCEEEEeec-CC-CCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKT-GVEPSDVGILIVNCS-LF-NPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 198 a~~la~~Aa~~aL~~a-gi~p~dID~LI~~ss-~~-~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
..+|+.+|++++|+++ |++|+|||.+|+++. ++ ...+..+..++..+|++ ++.++.++ .+|+++..++..|.+.+
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHH
Confidence 6899999999999996 999999999998753 22 22356678899999996 68999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 009598 275 KANPNSYAVVVSTENITQ 292 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~ 292 (531)
++|..+.+||++.|.+|.
T Consensus 105 ~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 105 KAGEGDVFISAGVETVSR 122 (406)
T ss_pred HCCCCCEEEEeeEEeccc
Confidence 999999999999998765
No 99
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.66 E-value=6.5e-06 Score=88.46 Aligned_cols=185 Identities=10% Similarity=0.155 Sum_probs=112.7
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccC-CCCHHhHHHHHHHHHHcCCCeEEeecCCCcC-CCCCcchhhhhhcHH
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESS-FFQEESLQFQKRIASRASVGDETYLSRGITS-RPPNICIHEARVEAD 199 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~-~~~~~~l~~~~~ea~ 199 (531)
++|.|.++|+.-|- -.+.+++.+.+..-. .+.+- .+ ++..+...+.....+... ...............
T Consensus 2 ~rVvITG~G~vsp~---G~~~~~~w~~l~~G~sgi~~~-----~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~~ 72 (406)
T PRK07967 2 RRVVITGLGIVSSI---GNNQQEVLASLREGRSGITFS-----PE-FAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDAS 72 (406)
T ss_pred CcEEEEcceEECCC---CCCHHHHHHHHHcCCCceeEC-----Cc-ccccCCCCceEEEcCCChhhcCCHHHhhcCCHHH
Confidence 58999999999987 367788887654210 00000 00 111232222221111000 000001111112356
Q ss_pred HHHHHHHHHHHHhcCCCCCC-----cCEEEEeecCC------------------C--------CCC-cHHHHHHHHcCCC
Q 009598 200 EVMFGALDSLFEKTGVEPSD-----VGILIVNCSLF------------------N--------PVP-SLSSMIVNHYKLR 247 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~d-----ID~LI~~ss~~------------------~--------~~P-s~a~~I~~~LGl~ 247 (531)
.++..|++++|+++|+++++ +++++-.+... . ..| ..+..|...||++
T Consensus 73 ~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~ 152 (406)
T PRK07967 73 AYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIK 152 (406)
T ss_pred HHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCC
Confidence 78899999999999987543 44444222111 0 111 2577899999997
Q ss_pred CCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCC---------C------------C--CCccccc
Q 009598 248 DDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQNWY---------S------------G--NDRSMLL 304 (531)
Q Consensus 248 ~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~~---------~------------~--~dr~~ll 304 (531)
. +++.++ .+|++++.||..|.++|+.+..+.+||.++|..+..+. . + .+|+
T Consensus 153 G--p~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~--- 226 (406)
T PRK07967 153 G--VNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRD--- 226 (406)
T ss_pred C--Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCC---
Confidence 4 677889 59999999999999999999999999999987543100 0 0 1122
Q ss_pred cccccccceEEEEEeeCC
Q 009598 305 CNCLFRMGGAAVLLSNKA 322 (531)
Q Consensus 305 ~~~lfgDGAaAvLLs~~~ 322 (531)
..+.|+||+++||++.+
T Consensus 227 -G~v~gEGaa~lvLe~~~ 243 (406)
T PRK07967 227 -GFVIAGGGGVVVVEELE 243 (406)
T ss_pred -ceeeeceEEEEEEeeHH
Confidence 45789999999999754
No 100
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=9.7e-08 Score=102.34 Aligned_cols=91 Identities=16% Similarity=0.186 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCC-----CcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPV-----PSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAK 271 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~-----Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~ 271 (531)
..+|+.+|++++|+++|++|+|||.+|++++ +++.. |+....++ .++. ++++++++ .+|++++.||..|.
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~-~~Casg~~al~~Aa 101 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHE-AACASGSVATLAAM 101 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeecc-cccHHHHHHHHHHH
Confidence 5899999999999999999999999998753 44322 22233232 2443 46799999 59999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCC
Q 009598 272 NLLKANPNSYAVVVSTENITQ 292 (531)
Q Consensus 272 ~lL~~~~~~~aLVVstE~~S~ 292 (531)
.++++|..++|||+++|..|.
T Consensus 102 ~~I~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 102 ADLRAGRYDVALVVGVELMKT 122 (403)
T ss_pred HHHHcCCCCEEEEEEEEecCC
Confidence 999999999999999998653
No 101
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.64 E-value=6e-06 Score=89.06 Aligned_cols=187 Identities=12% Similarity=0.064 Sum_probs=113.4
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccC-CCCHHhHHHHHHHHHHcCCCeEE--eecCCCcCCCCCcchhhhh--h
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESS-FFQEESLQFQKRIASRASVGDET--YLSRGITSRPPNICIHEAR--V 196 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~er~--~~~~~~~~~~~~~~l~~~~--~ 196 (531)
++|.|.|+|+-.|- -.+.++|.+.+..-. .+.+-.. .-.++.++..+. .++.+ .. +..+-++.+ .
T Consensus 12 ~~VvItGig~~sp~---g~~~~~~w~~L~~G~s~i~~~~~----~~~~~~~~~~~~~g~i~~~-~d--~~~~~~~~~~~d 81 (418)
T PRK07910 12 PNVVVTGIAMTTAL---ATDAETTWKLLLDGQSGIRTLDD----PFVEEFDLPVRIGGHLLEE-FD--HQLTRVELRRMS 81 (418)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHcCCCeeEeCCh----hhhhccCCCcceEEEeccC-cc--ccCCHHHHhhcc
Confidence 68999999999987 468888888765311 0110000 001112222221 11111 10 001111111 2
Q ss_pred cHHHHHHHHHHHHHHhcCC---CCCCcCEEEEeecCCC-------------------------CCC-cHHHHHHHHcCCC
Q 009598 197 EADEVMFGALDSLFEKTGV---EPSDVGILIVNCSLFN-------------------------PVP-SLSSMIVNHYKLR 247 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi---~p~dID~LI~~ss~~~-------------------------~~P-s~a~~I~~~LGl~ 247 (531)
....++..|+.++|+++|+ +++.++++|-.+.... ..| ..+..|...+|++
T Consensus 82 ~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~ 161 (418)
T PRK07910 82 YLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK 161 (418)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC
Confidence 3566899999999999996 5566665543321110 012 2456678888887
Q ss_pred CCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC----------C-CC-----CC------Ccccccc
Q 009598 248 DDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQN----------W-YS-----GN------DRSMLLC 305 (531)
Q Consensus 248 ~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~----------~-~~-----~~------dr~~ll~ 305 (531)
. .++.++ .+|++++.||..|.++|+.|..+.++|.++|..... . .. ++ |+. =.
T Consensus 162 G--~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~--~~ 236 (418)
T PRK07910 162 A--GVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKD--RD 236 (418)
T ss_pred C--Cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCC--CC
Confidence 4 567788 599999999999999999999999999999973210 0 11 00 111 02
Q ss_pred ccccccceEEEEEeeCCC
Q 009598 306 NCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 306 ~~lfgDGAaAvLLs~~~~ 323 (531)
..++|+|++++||++.+.
T Consensus 237 G~v~gEGaa~vvLe~~~~ 254 (418)
T PRK07910 237 GFVFGEGGALMVIETEEH 254 (418)
T ss_pred CEeeeceEEEEEEeeHHH
Confidence 568899999999997653
No 102
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.63 E-value=1.6e-07 Score=100.19 Aligned_cols=94 Identities=16% Similarity=0.298 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSL-FNP-VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
+.+|+.+|++++|+++|++|+|||.+|+.+.. ... .+..+..+....|++.+++++.++ .+|++++.|+..|.+.++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 68999999999999999999999999998753 222 234566777889998679999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999986
No 103
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.61 E-value=1.7e-07 Score=100.33 Aligned_cols=95 Identities=18% Similarity=0.235 Sum_probs=84.3
Q ss_pred cHHHHHHHHHHHHHHh-cCCCCCCcCEEEEeecC--CCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEK-TGVEPSDVGILIVNCSL--FNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~-agi~p~dID~LI~~ss~--~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~l 273 (531)
.+.+|+..|++++|++ +|++|++||.+|+.+.. ....+..+..+....|++.+++++.++ .+|++++.|+..|.+.
T Consensus 25 ~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~ 103 (401)
T PRK09050 25 RADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARA 103 (401)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHH
Confidence 3689999999999996 69999999999998643 222366777899999998789999999 6999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 009598 274 LKANPNSYAVVVSTENITQ 292 (531)
Q Consensus 274 L~~~~~~~aLVVstE~~S~ 292 (531)
+++|..+.+||++.|.+|.
T Consensus 104 I~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 104 IKAGEAELMIAGGVESMSR 122 (401)
T ss_pred HHCCCCCEEEEeccccccc
Confidence 9999999999999999986
No 104
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.60 E-value=2.1e-07 Score=99.63 Aligned_cols=95 Identities=15% Similarity=0.247 Sum_probs=84.4
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CC-CCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LF-NPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~-~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
.+.+|+.+|++++|+++|++|+|||.+|+++. +. ...+.++..++...|++..++++.++ .+|++|+.|+..|...+
T Consensus 25 ~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I 103 (401)
T PRK08131 25 RPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAI 103 (401)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHH
Confidence 36899999999999999999999999999864 22 22356677789999998779999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 009598 275 KANPNSYAVVVSTENITQ 292 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~ 292 (531)
++|..+.+||++.|.+|.
T Consensus 104 ~sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 104 TCGEGDLYLAGGVESMSR 121 (401)
T ss_pred HCCCCCEEEEEEecCCCC
Confidence 999999999999999885
No 105
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.60 E-value=1.4e-07 Score=100.83 Aligned_cols=95 Identities=17% Similarity=0.284 Sum_probs=84.5
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSL-FNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
.+.+|+..|++++|+++|++|+|||.+|+.+.. ....+..+.+++...|++.+++++.++ .+|++++.|+..|.+.++
T Consensus 26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 26 PAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIM 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHH
Confidence 378999999999999999999999999998642 223456677788999998679999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~ms~ 121 (392)
T PRK06633 105 TGDNEIVIAGGQENMSL 121 (392)
T ss_pred cCCCCEEEEcccccCCC
Confidence 99999999999999885
No 106
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.58 E-value=2.5e-07 Score=99.06 Aligned_cols=94 Identities=16% Similarity=0.234 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHh-cCCCCCCcCEEEEeecC--CCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEK-TGVEPSDVGILIVNCSL--FNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 198 a~~la~~Aa~~aL~~-agi~p~dID~LI~~ss~--~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
+.+|+.+|++++|++ +|++|+|||.+|+.+.. ....+..+..++..+|++.+++++.++ .+|++|+.|+..|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHH
Confidence 689999999999996 69999999999998642 222366788899999998779999999 69999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 009598 275 KANPNSYAVVVSTENITQ 292 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~ 292 (531)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999985
No 107
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.57 E-value=2.9e-07 Score=98.28 Aligned_cols=94 Identities=15% Similarity=0.261 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSL-FNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
+.+|+.+|++++|+++|++|+|||.+|+.+.. ....+..+..++..+|++.++.++.++ .+|++++.++..|.+.+++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhc
Confidence 68999999999999999999999999987642 122334567799999997568999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009598 277 NPNSYAVVVSTENITQ 292 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~ 292 (531)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vla~G~e~ms~ 120 (388)
T PRK06366 105 GERDLVIAGGMENMSN 120 (388)
T ss_pred CCCCEEEEEeeEcccc
Confidence 9999999988898773
No 108
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.55 E-value=2.6e-07 Score=99.85 Aligned_cols=95 Identities=12% Similarity=0.192 Sum_probs=83.3
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSL-FNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
...+|+.+|++++|+++|++|++||.+|+.+.. ....+.++..+.-..|++..++++.++ ++|++++.|+.+|.+.++
T Consensus 30 ~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~ 108 (430)
T TIGR02446 30 PAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIM 108 (430)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHH
Confidence 368999999999999999999999999998643 222355666677778998779999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+.+|+++.|.+|.
T Consensus 109 sG~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 109 AGAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCCEEEEeeeEcccC
Confidence 99999999999999985
No 109
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.55 E-value=2.1e-07 Score=92.61 Aligned_cols=121 Identities=22% Similarity=0.381 Sum_probs=84.0
Q ss_pred hcHHHHHHHHHHHHHHhcCCCCCC------cCEEEEeecCCC-----------------C------CC-cHHHHHHHHcC
Q 009598 196 VEADEVMFGALDSLFEKTGVEPSD------VGILIVNCSLFN-----------------P------VP-SLSSMIVNHYK 245 (531)
Q Consensus 196 ~ea~~la~~Aa~~aL~~agi~p~d------ID~LI~~ss~~~-----------------~------~P-s~a~~I~~~LG 245 (531)
.....++..|+.+||+++|+++++ +.+++-++..++ + .| ..+.+|+..+|
T Consensus 85 ~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 164 (254)
T PF00109_consen 85 DRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFG 164 (254)
T ss_dssp -HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHT
T ss_pred hhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcC
Confidence 347788999999999999999853 444443322210 1 23 25778999999
Q ss_pred CCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEec-cCCCC---------CCCCC------Ccccccccccc
Q 009598 246 LRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTE-NITQN---------WYSGN------DRSMLLCNCLF 309 (531)
Q Consensus 246 l~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE-~~S~~---------~~~~~------dr~~ll~~~lf 309 (531)
++. +++-+++ +|++++.||..|.++|+.|..+.|||.++| .++.. ....+ |+.. ...++
T Consensus 165 l~G--~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~ 239 (254)
T PF00109_consen 165 LRG--PSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVL 239 (254)
T ss_dssp B-S--SEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-B
T ss_pred CCC--ccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEE
Confidence 974 6788885 999999999999999999999999999999 44431 11111 1111 35789
Q ss_pred ccceEEEEEeeC
Q 009598 310 RMGGAAVLLSNK 321 (531)
Q Consensus 310 gDGAaAvLLs~~ 321 (531)
|+||+++||++.
T Consensus 240 gEGa~~~vLe~~ 251 (254)
T PF00109_consen 240 GEGAGALVLERL 251 (254)
T ss_dssp B-EEEEEEEEEH
T ss_pred ECceEEEEEEEh
Confidence 999999999864
No 110
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.52 E-value=4.8e-07 Score=96.61 Aligned_cols=95 Identities=15% Similarity=0.322 Sum_probs=80.8
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSL-FNP-VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
.+.+|+..|++++|+++|++|+|||.+|+.+.. ... .+..+..+.-.-|++.+++++.++ .+|++|+.|+..|.+.+
T Consensus 25 ~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I 103 (390)
T PRK06504 25 HPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAV 103 (390)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHH
Confidence 368999999999999999999999999998643 211 245555544455887689999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 009598 275 KANPNSYAVVVSTENITQ 292 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~ 292 (531)
++|..+.+||++.|.+|.
T Consensus 104 ~sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 104 MSGTMDIVIAAGVESMTR 121 (390)
T ss_pred HCCCCCEEEEeeeeecCC
Confidence 999999999999999885
No 111
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.50 E-value=5.9e-07 Score=96.23 Aligned_cols=93 Identities=15% Similarity=0.215 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSL-FNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|+.+|++++|+++|++++|||.+++++.. .+........+.+.+|++ .++++.+. ++|++++.+|..|...+++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHC
Confidence 58899999999999999999999999987642 121122235688899997 58899999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009598 277 NPNSYAVVVSTENITQ 292 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~ 292 (531)
|..+.+||++.|..|.
T Consensus 105 G~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 105 GAYDIALALGVEKLKD 120 (398)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998763
No 112
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.48 E-value=5.4e-07 Score=96.18 Aligned_cols=94 Identities=10% Similarity=0.187 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHh-cCCCCCCcCEEEEeecCC-CC-CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEK-TGVEPSDVGILIVNCSLF-NP-VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 198 a~~la~~Aa~~aL~~-agi~p~dID~LI~~ss~~-~~-~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
+++|+..+++++|++ +|++|+|||.+|+++... .. .+..+..+....|++.+++++.++ .+|++++.|+..|...+
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHH
Confidence 689999999999997 699999999999987542 22 245566788899998679999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 009598 275 KANPNSYAVVVSTENITQ 292 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~ 292 (531)
++|..+.+||++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999999885
No 113
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.45 E-value=1e-06 Score=95.39 Aligned_cols=94 Identities=22% Similarity=0.276 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCC--cCEEEEeecC---CCCCCcHHHHHHHHcCCC------CCceeEEecCCCchHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSD--VGILIVNCSL---FNPVPSLSSMIVNHYKLR------DDIKTYNLGGMGCSAGLIS 266 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~d--ID~LI~~ss~---~~~~Ps~a~~I~~~LGl~------~~~~~fdl~g~gCsg~l~A 266 (531)
..+|+.+|++++|+++|++|+| ||.+|+++.. +...+.++..++..+|++ ..++++.++ .+|++++.|
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~A 126 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGLA 126 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHHH
Confidence 6899999999999999999999 9999987642 112355667777666554 368899999 599999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEeccCCC
Q 009598 267 IELAKNLLKANPNSYAVVVSTENITQ 292 (531)
Q Consensus 267 L~lA~~lL~~~~~~~aLVVstE~~S~ 292 (531)
+..|.+.+++|..+.+||++.|.+|.
T Consensus 127 i~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 127 VQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 99999999999999999999998775
No 114
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.44 E-value=9.3e-07 Score=95.59 Aligned_cols=93 Identities=13% Similarity=0.107 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC-CCCCcHHH-HHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLF-NPVPSLSS-MIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~-~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
..+|+.+|+++||+++|++++|||.+|+++... ...+..+. .++..+|++ +++++.+. .+|+++..||..|...++
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHH
Confidence 579999999999999999999999988775332 22223333 367999998 58999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+.|||+++|..|.
T Consensus 115 sG~~~~vLv~G~e~~s~ 131 (430)
T PRK06365 115 SGRMDCVAVYGFETMSH 131 (430)
T ss_pred cCCCCEEEEEEeeeccc
Confidence 99999999999997653
No 115
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.41 E-value=7.6e-07 Score=94.94 Aligned_cols=95 Identities=11% Similarity=0.162 Sum_probs=81.6
Q ss_pred cHHHHHHHHHHHHHHh-cCCCCCCcCEEEEeecCC-CC-CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEK-TGVEPSDVGILIVNCSLF-NP-VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~-agi~p~dID~LI~~ss~~-~~-~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~l 273 (531)
.+.+|+.+|++++|++ +|++|++||.+|+++... .. .+..+..+....|++..++++.++ .+|++++.|+..|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~ 102 (385)
T TIGR02445 24 RAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARA 102 (385)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHH
Confidence 3689999999999997 599999999999986532 21 244666666688998779999999 5999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 009598 274 LKANPNSYAVVVSTENITQ 292 (531)
Q Consensus 274 L~~~~~~~aLVVstE~~S~ 292 (531)
+++|..+.+|+++.|.+|.
T Consensus 103 I~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 103 IMTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HHCCCCCEEEEeeehhccc
Confidence 9999999999999999885
No 116
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.40 E-value=2.6e-05 Score=83.55 Aligned_cols=183 Identities=15% Similarity=0.105 Sum_probs=112.9
Q ss_pred CCCeEEEEEeEecCCCCceecHHHHHHHhhc--cC-CCCHHhHHHHHHHHHHcCC-CeEEeecCCCcCCCCCcchhhhhh
Q 009598 121 SSPVYLVDFSCYKPADERKMSMEAFLKMSEE--SS-FFQEESLQFQKRIASRASV-GDETYLSRGITSRPPNICIHEARV 196 (531)
Q Consensus 121 ~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~--~~-~~~~~~~~f~~ki~~~sGI-~er~~~~~~~~~~~~~~~l~~~~~ 196 (531)
+++|.|.++|+--|- =.+.+++.+.+.. .+ .++... |- . ...+. ++- .... ..+. ........
T Consensus 5 ~~rVvITGiG~vsp~---G~~~e~~w~aL~~G~sg~~~~~~~--~~--~-~~~~~~~~~---~~~~-~~~~-~~~~r~~~ 71 (398)
T PRK06519 5 PNDVVITGIGLVSSL---GEGLDAHWNALSAGRPQPNVDTET--FA--P-YPVHPLPEI---DWSQ-QIPK-RGDQRQME 71 (398)
T ss_pred CCCEEEEcceEECCC---CCCHHHHHHHHHcCCCCCCCCccc--cc--C-cCccccccc---Chhh-cCCc-hhhhhccC
Confidence 568999999999987 4778888887643 11 111100 00 0 00000 000 0000 0011 00001112
Q ss_pred cHHHHHHHHHHHHHHhcCCCC-----CCcCEEEEeecCC--C---------------------------CCC--------
Q 009598 197 EADEVMFGALDSLFEKTGVEP-----SDVGILIVNCSLF--N---------------------------PVP-------- 234 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p-----~dID~LI~~ss~~--~---------------------------~~P-------- 234 (531)
....++..|++++|+++|+++ +++++++-.+... . ..|
T Consensus 72 r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 151 (398)
T PRK06519 72 TWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLS 151 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhh
Confidence 367789999999999999854 3455555443211 0 112
Q ss_pred -cHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecc-CCC---------CCCC------C
Q 009598 235 -SLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTEN-ITQ---------NWYS------G 297 (531)
Q Consensus 235 -s~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~-~S~---------~~~~------~ 297 (531)
..+..|...+|++. .++.+++ +|++++.||..|.++|+.+..+.+||.++|. ++. .+.. .
T Consensus 152 n~~a~~is~~~gl~G--p~~ti~~-acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~ 228 (398)
T PRK06519 152 NLLAGNISIVHKVTG--SSRTFMG-EESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPV 228 (398)
T ss_pred hHHHHHHHHHhCCCC--ccccccC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCch
Confidence 24677889999974 7888994 9999999999999999999999999999986 221 0111 0
Q ss_pred C-----CccccccccccccceEEEEEeeCCC
Q 009598 298 N-----DRSMLLCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 298 ~-----dr~~ll~~~lfgDGAaAvLLs~~~~ 323 (531)
. +|+ ..+.|+||+++||++.+.
T Consensus 229 ~d~~~~~r~----G~v~GEGAa~lvLE~~~~ 255 (398)
T PRK06519 229 WSRGGEDGG----GFILGSGGAFLVLESREH 255 (398)
T ss_pred hccCccCCC----CeeeeceEEEEEEeeHHH
Confidence 1 233 467899999999998653
No 117
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.38 E-value=2.5e-05 Score=82.10 Aligned_cols=119 Identities=11% Similarity=0.092 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHhcCC--CCCCcCEEEEeecCC-----------------CCCC---------cHHHHHHHHcCCCCC
Q 009598 198 ADEVMFGALDSLFEKTGV--EPSDVGILIVNCSLF-----------------NPVP---------SLSSMIVNHYKLRDD 249 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi--~p~dID~LI~~ss~~-----------------~~~P---------s~a~~I~~~LGl~~~ 249 (531)
..+++..|++++++++|+ +++++++++-.+... ...| ..+..|...+|++.
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G- 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG- 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC-
Confidence 467889999999999995 677887776443111 0111 35778888999974
Q ss_pred ceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC---------------CC-C--------CCcccccc
Q 009598 250 IKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQNW---------------YS-G--------NDRSMLLC 305 (531)
Q Consensus 250 ~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~---------------~~-~--------~dr~~ll~ 305 (531)
+++-++ .+|++++.||..|.++|+.|..+.+||.++|.....+ .. + .+|+
T Consensus 83 -p~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~---- 156 (342)
T PRK14691 83 -PIGAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD---- 156 (342)
T ss_pred -Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC----
Confidence 678888 4999999999999999999999999999998732100 00 0 1222
Q ss_pred ccccccceEEEEEeeCCC
Q 009598 306 NCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 306 ~~lfgDGAaAvLLs~~~~ 323 (531)
..++||||+++||++...
T Consensus 157 G~v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEH 174 (342)
T ss_pred CccccceEEEEEEeeHHH
Confidence 467899999999997543
No 118
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.36 E-value=2.1e-06 Score=92.81 Aligned_cols=94 Identities=18% Similarity=0.272 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC-CCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLF-NPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|+.+|++++|+++|++++|||.+|+++... ...+..+..+.-..|++..++++.++ ++|++++.++..|.+.+++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHC
Confidence 689999999999999999999999999986432 11244566655666676568999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009598 277 NPNSYAVVVSTENITQ 292 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~ 292 (531)
|..+.+||++.|.+|.
T Consensus 110 G~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 110 GQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCEEEEeeEEccCC
Confidence 9999999999999885
No 119
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.35 E-value=1.9e-06 Score=91.79 Aligned_cols=94 Identities=17% Similarity=0.325 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSL-FNP-VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
..+|+.+|++++|+++|++++|||.+|+++.. ... .+..+..+.-..|++..+.++.++ .+|++++.++..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~ 104 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVM 104 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHH
Confidence 68899999999999999999999999987542 111 233344444457776568889999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
+|..+.+||++.|.+|.
T Consensus 105 sG~~d~vLv~G~e~ms~ 121 (382)
T PRK07801 105 SGTQDLVVAGGVQNMSQ 121 (382)
T ss_pred CCCCCEEEEcchhhhcC
Confidence 99999999999997654
No 120
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.33 E-value=1.3e-05 Score=81.37 Aligned_cols=117 Identities=20% Similarity=0.294 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKAN 277 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~ 277 (531)
-..|..+|++.+|+|++++++|||.++-.--....++ +++.++.|++ +-+.|.| +||....+|.+|..++..+
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~vdgg 123 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGI----PFLGLYG-ACSTMMESLALAAMLVDGG 123 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHHHhCC
Confidence 3568899999999999999999999986644433333 5778888876 4899997 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC---CCCC----CCCccccccccccccceEEEEEeeCCC
Q 009598 278 PNSYAVVVSTENITQ---NWYS----GNDRSMLLCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 278 ~~~~aLVVstE~~S~---~~~~----~~dr~~ll~~~lfgDGAaAvLLs~~~~ 323 (531)
-.+++|+.++--... .|.. |..|.. +...---||+|+||++...
T Consensus 124 ~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~ 174 (329)
T PF07451_consen 124 FADYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGS 174 (329)
T ss_dssp S-SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--
T ss_pred CcceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCC
Confidence 889999888665442 2322 223331 3344568999999997754
No 121
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.20 E-value=0.00016 Score=92.44 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=62.7
Q ss_pred HHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-C---------CCC-------CC
Q 009598 236 LSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQ-N---------WYS-------GN 298 (531)
Q Consensus 236 ~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~-~---------~~~-------~~ 298 (531)
++.+|.++||++. .++.+. .+|++++.||++|.+.|+.|..+.+||.+.+.... . ... .+
T Consensus 185 ~A~RIS~~f~L~G--ps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLGG--MNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCCC--Cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 4788999999984 788899 59999999999999999999999999998876321 0 011 01
Q ss_pred CccccccccccccceEEEEEeeCC
Q 009598 299 DRSMLLCNCLFRMGGAAVLLSNKA 322 (531)
Q Consensus 299 dr~~ll~~~lfgDGAaAvLLs~~~ 322 (531)
.+. ...+.|+|++++||.+-.
T Consensus 262 ~~a---dG~v~GEGag~vvLkrL~ 282 (2582)
T TIGR02813 262 IDS---KGMMIGEGIGMMALKRLE 282 (2582)
T ss_pred CCC---CcccccceEEEEEeCcHH
Confidence 111 246889999999999744
No 122
>PRK07937 lipid-transfer protein; Provisional
Probab=98.17 E-value=0.00019 Score=75.71 Aligned_cols=88 Identities=14% Similarity=0.075 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCC--CcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 199 DEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPV--PSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 199 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~--Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
.+|+.+|++++|+++|++++|||.++.+++ +... ......+...+|+.+......+. +++..++..|...+++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~s 99 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLT 99 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhc
Confidence 689999999999999999999998854333 2111 11123455678875344555555 2477799999999999
Q ss_pred CCCCeEEEEEeccCC
Q 009598 277 NPNSYAVVVSTENIT 291 (531)
Q Consensus 277 ~~~~~aLVVstE~~S 291 (531)
|..++|||++.|..+
T Consensus 100 G~~d~VLv~g~~k~~ 114 (352)
T PRK07937 100 GEVDTALVYGFGKSS 114 (352)
T ss_pred CCCCEEEEEEecccC
Confidence 999999999999654
No 123
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.10 E-value=1.1e-05 Score=86.06 Aligned_cols=88 Identities=14% Similarity=0.064 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKAN 277 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~ 277 (531)
..+|+.+|++++|+++|++++|||.+++++.. .+.....+++.+|++ ..+..++. .||+++..++..|...+++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999998753211 111124588999997 56888888 59999999999999999999
Q ss_pred CCCeEEEEEeccC
Q 009598 278 PNSYAVVVSTENI 290 (531)
Q Consensus 278 ~~~~aLVVstE~~ 290 (531)
..+.||||+.|..
T Consensus 100 ~~d~vLvvg~e~~ 112 (388)
T PRK08142 100 KCSVALITLAGRP 112 (388)
T ss_pred CCCEEEEEeeeec
Confidence 9999999999974
No 124
>PRK07855 lipid-transfer protein; Provisional
Probab=97.93 E-value=4.2e-05 Score=81.70 Aligned_cols=85 Identities=14% Similarity=0.122 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKAN 277 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~ 277 (531)
..+|+.+|++++|+++|++++|||.+++++.. ..+. ..+++.+|+++-....++. .||+++..++..|...+++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCC
Confidence 47899999999999999999999999874321 1222 4588999997424556888 59999999999999999999
Q ss_pred CCCeEEEEEe
Q 009598 278 PNSYAVVVST 287 (531)
Q Consensus 278 ~~~~aLVVst 287 (531)
..+.|||+++
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 125
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.91 E-value=0.00077 Score=72.50 Aligned_cols=123 Identities=15% Similarity=0.237 Sum_probs=88.5
Q ss_pred hhhcHHHHHHHHHHHHHHhcCCC-CCCcC--EEE-EeecC---C----C--------------------CCC-cHHHHHH
Q 009598 194 ARVEADEVMFGALDSLFEKTGVE-PSDVG--ILI-VNCSL---F----N--------------------PVP-SLSSMIV 241 (531)
Q Consensus 194 ~~~ea~~la~~Aa~~aL~~agi~-p~dID--~LI-~~ss~---~----~--------------------~~P-s~a~~I~ 241 (531)
.......++..|+++|++++|++ ..+++ +-+ +.++. . . ..| ..+..++
T Consensus 67 ~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs 146 (412)
T COG0304 67 FMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVA 146 (412)
T ss_pred cccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHH
Confidence 33457889999999999999998 33443 222 22321 1 0 122 2466788
Q ss_pred HHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecc-CC--------------CC-------CCC-CC
Q 009598 242 NHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTEN-IT--------------QN-------WYS-GN 298 (531)
Q Consensus 242 ~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~-~S--------------~~-------~~~-~~ 298 (531)
..+|++. ..+.+++ +|+++..||..|.++|+.|..+.+++.++|. ++ .. +++ ..
T Consensus 147 ~~~g~~G--~~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~ 223 (412)
T COG0304 147 IVFGLKG--PNYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDK 223 (412)
T ss_pred HHhCCCC--CcCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCC
Confidence 8999974 7788894 9999999999999999999999999999977 32 21 011 12
Q ss_pred CccccccccccccceEEEEEeeCCC
Q 009598 299 DRSMLLCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 299 dr~~ll~~~lfgDGAaAvLLs~~~~ 323 (531)
+|+ ..++|.||+++||+..+.
T Consensus 224 ~Rd----Gfv~gEGag~lVLE~~eh 244 (412)
T COG0304 224 NRD----GFVIGEGAGALVLEELEH 244 (412)
T ss_pred CCC----CEEEecceeEEEecChhh
Confidence 344 468899999999998664
No 126
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=97.79 E-value=0.00039 Score=70.65 Aligned_cols=96 Identities=20% Similarity=0.311 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHH-HHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMI-VNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I-~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+|...+.+..+++++++|++|+-+++.+....-.-...+++ +-.-|++..++..-++ --|++|+.|+.....-+++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir~ 139 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIRA 139 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHhc
Confidence 4678899999999999999999999998864221112444444 4455888777777777 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCCCC
Q 009598 277 NPNSYAVVVSTENITQNW 294 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~~~ 294 (531)
|.+.--|-.+.|.+|.++
T Consensus 140 G~ydIGla~GvESMt~~~ 157 (435)
T KOG1389|consen 140 GFYDIGLAAGVESMTTNY 157 (435)
T ss_pred CceeeecccchhhhcccC
Confidence 999999999999998753
No 127
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=97.71 E-value=0.0002 Score=76.42 Aligned_cols=89 Identities=18% Similarity=0.206 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHhcC-CCC-CCcCEEEEeecCCC-CCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTG-VEP-SDVGILIVNCSLFN-PVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 198 a~~la~~Aa~~aL~~ag-i~p-~dID~LI~~ss~~~-~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
..+|+.+|++++|+++| +++ +|||.+++++.... ........++..+|+. ....+.+ |+++..++..|...+
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV 99 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHI 99 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHH
Confidence 58899999999999999 998 79999987542111 1112233467889985 2344444 778899999999999
Q ss_pred HcCCCCeEEEEEeccCC
Q 009598 275 KANPNSYAVVVSTENIT 291 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S 291 (531)
++|..++|||++.|..+
T Consensus 100 ~sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 100 NSGLANVVVVEAHSKPS 116 (385)
T ss_pred HcCCCCEEEEEEEeecc
Confidence 99999999999998643
No 128
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.49 E-value=0.00041 Score=74.29 Aligned_cols=95 Identities=17% Similarity=0.307 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhc--CCCCCCcCEEEEeecC--CCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKT--GVEPSDVGILIVNCSL--FNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 198 a~~la~~Aa~~aL~~a--gi~p~dID~LI~~ss~--~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~l 273 (531)
.+++.....+..+++. ++++.+||-+|+.|.. ....+..+..++...|++.+++.+.++ .+|++++.|+..|...
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHH
Confidence 5666666666666544 6888889999988643 234678889999999999779999999 6999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCC
Q 009598 274 LKANPNSYAVVVSTENITQN 293 (531)
Q Consensus 274 L~~~~~~~aLVVstE~~S~~ 293 (531)
+++|..+.+|+++.|.+|..
T Consensus 106 I~sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 106 IASGEADVVLAGGVEKMSDA 125 (392)
T ss_pred HHCCCCCEEEEEeeeeccCC
Confidence 99999999999999999973
No 129
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.27 E-value=0.011 Score=71.08 Aligned_cols=190 Identities=15% Similarity=0.166 Sum_probs=117.8
Q ss_pred CCeEEEEEeEecCCCCceecHHHHHHHhhccC----CCCHHhHHHHHHHHHHcCC-----CeEEeecCC-----CcCCCC
Q 009598 122 SPVYLVDFSCYKPADERKMSMEAFLKMSEESS----FFQEESLQFQKRIASRASV-----GDETYLSRG-----ITSRPP 187 (531)
Q Consensus 122 ~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~----~~~~~~~~f~~ki~~~sGI-----~er~~~~~~-----~~~~~~ 187 (531)
.+|=|+|++|.+|. .-+.++|.+.+..-. .++++. |=.+..+- ..++|...+ .....+
T Consensus 4 ~~IAIiGm~~rfPg---a~~~~~~W~~l~~g~~~i~~ip~~r-----wd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~ 75 (1061)
T COG3321 4 EPIAIIGMACRFPG---ADSPEEFWDLLKEGRDEITEVPADR-----WDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDA 75 (1061)
T ss_pred CcEEEEeccccCCC---CCCHHHHHHHHhcCCceeeecChhh-----hhHhhccCCccccccccccccccccCCccccCH
Confidence 44889999999999 457788888776421 122331 11222222 222222111 000000
Q ss_pred -----CcchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCE----EEEee-cCCCCCC-------------------cHHH
Q 009598 188 -----NICIHEARVEADEVMFGALDSLFEKTGVEPSDVGI----LIVNC-SLFNPVP-------------------SLSS 238 (531)
Q Consensus 188 -----~~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~----LI~~s-s~~~~~P-------------------s~a~ 238 (531)
.++..+..+--..|..+.+-++|+++|+.|+.+.. |+.++ ..+|... -.+.
T Consensus 76 ~fFgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~ 155 (1061)
T COG3321 76 LFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAG 155 (1061)
T ss_pred HHcCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHH
Confidence 01112222334458899999999999999998884 44443 3344322 1578
Q ss_pred HHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC--CCC--------CCCC--cc--ccc
Q 009598 239 MIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQ--NWY--------SGND--RS--MLL 304 (531)
Q Consensus 239 ~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~--~~~--------~~~d--r~--~ll 304 (531)
+|...|+++ -+++.|. .+||+.+.|+++|...|+.|....||+-+....-. .++ ..+. +. .--
T Consensus 156 Risy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~a 232 (1061)
T COG3321 156 RISYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADA 232 (1061)
T ss_pred HHHHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCC
Confidence 899999997 4889999 69999999999999999999988888877655422 111 1110 00 000
Q ss_pred cccccccceEEEEEeeCC
Q 009598 305 CNCLFRMGGAAVLLSNKA 322 (531)
Q Consensus 305 ~~~lfgDGAaAvLLs~~~ 322 (531)
..++.|.|+++++|.+-.
T Consensus 233 dG~v~geG~g~vvLKrl~ 250 (1061)
T COG3321 233 DGYVRGEGAGVVVLKRLS 250 (1061)
T ss_pred CCEEEeeeEEEEEEEEhH
Confidence 235889999999998743
No 130
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.27 E-value=0.00068 Score=69.19 Aligned_cols=95 Identities=19% Similarity=0.196 Sum_probs=81.7
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
.+.+|+.-|++.+|+|++++|+|++-+|+.+. .-+.--..+.+.+=--||+-++.+..++ +.|++++.|+.+|.+-++
T Consensus 29 ~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~ 107 (396)
T KOG1390|consen 29 TATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQ 107 (396)
T ss_pred chhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHh
Confidence 37899999999999999999999999998853 3333334456666667888889999999 899999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009598 276 ANPNSYAVVVSTENITQ 292 (531)
Q Consensus 276 ~~~~~~aLVVstE~~S~ 292 (531)
.|..+.++..+.|.+|.
T Consensus 108 ~G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 108 TGHADIVVAGGMESMSN 124 (396)
T ss_pred cCCccEEEecccchhcc
Confidence 99999999999999996
No 131
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.85 E-value=0.00099 Score=68.11 Aligned_cols=62 Identities=24% Similarity=0.306 Sum_probs=46.2
Q ss_pred cccccccccccccccccchHHHHHHHHH--hcCCCCCCCEEEEEEeChhHhhheeeeEEccCCC
Q 009598 447 HMEPSRMTLHRFGNTSSSSLWYELAYTE--GKGRVARGDRVWQIAFGSGFKCNSAVWRALMDIP 508 (531)
Q Consensus 447 ~~e~S~~~l~r~GNtsSaSi~~~La~~~--~~gri~~GD~Vl~i~fGsG~~~~s~v~r~~~~~~ 508 (531)
+++||...-.+.||+.++|++..|+-++ ..+..-.|+||.|.++|||........++.++..
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~~ 206 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGAE 206 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTGG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCcc
Confidence 5667777778899999999999999988 3445557999999999999877666666665443
No 132
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=96.78 E-value=0.0018 Score=64.53 Aligned_cols=89 Identities=16% Similarity=0.284 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcC
Q 009598 199 DEVMFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKAN 277 (531)
Q Consensus 199 ~~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~ 277 (531)
.+++.+|+.++|++++++-++|+--++.- -.+.. ...+-.-.+||. .++.||+++ .|+.+-.||-+|+++++++
T Consensus 30 pd~a~ea~tkal~da~ikys~vqqa~vgyvfgdst---cgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesg 104 (408)
T KOG1406|consen 30 PDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDST---CGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESG 104 (408)
T ss_pred chHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCc---cchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcC
Confidence 46789999999999999999998655442 11211 123455689998 799999996 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 009598 278 PNSYAVVVSTENITQ 292 (531)
Q Consensus 278 ~~~~aLVVstE~~S~ 292 (531)
....||..+-|.+++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999886
No 133
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.98 E-value=0.18 Score=52.72 Aligned_cols=119 Identities=15% Similarity=0.250 Sum_probs=83.3
Q ss_pred hcHHHHHHHHHHHHHHhcCCCCC---CcC-----EEEEeecCC----------------------CCCC----cH-HHHH
Q 009598 196 VEADEVMFGALDSLFEKTGVEPS---DVG-----ILIVNCSLF----------------------NPVP----SL-SSMI 240 (531)
Q Consensus 196 ~ea~~la~~Aa~~aL~~agi~p~---dID-----~LI~~ss~~----------------------~~~P----s~-a~~I 240 (531)
.....++..|++++|+++++-+. +.| ++| .+..+ +..| .+ +.+|
T Consensus 92 s~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~i-Gtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~v 170 (440)
T KOG1394|consen 92 SKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLI-GTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYV 170 (440)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEe-ccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchh
Confidence 35788999999999999997765 223 222 12111 1223 22 6789
Q ss_pred HHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC-----C---------C-CC--------
Q 009598 241 VNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQN-----W---------Y-SG-------- 297 (531)
Q Consensus 241 ~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~-----~---------~-~~-------- 297 (531)
.-+||++ -+...++ .+|+.+..+|.-|.++++.|..+..|-=++|.+-.. | . ++
T Consensus 171 sm~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD 247 (440)
T KOG1394|consen 171 SMKYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFD 247 (440)
T ss_pred hhhhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCc
Confidence 9999997 4677889 699999999999999999998777777777763210 0 0 01
Q ss_pred CCccccccccccccceEEEEEeeCC
Q 009598 298 NDRSMLLCNCLFRMGGAAVLLSNKA 322 (531)
Q Consensus 298 ~dr~~ll~~~lfgDGAaAvLLs~~~ 322 (531)
.+|+ ..+.|.|++.+||+.-+
T Consensus 248 ~~Rd----GFVmGEGagvlvlEelE 268 (440)
T KOG1394|consen 248 KKRD----GFVMGEGAGVLVLEELE 268 (440)
T ss_pred cCCC----ceeeccceeEEehHhHH
Confidence 1233 46789999999998644
No 134
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=94.77 E-value=0.058 Score=53.93 Aligned_cols=92 Identities=16% Similarity=0.150 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEee----cCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNC----SLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~s----s~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~l 273 (531)
+.++..-|++.+|+.+++.++.+|.+|+.. |.+- --++..|--+.|.+.+..++.++ -=|.++.+++-.+.+-
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDg--IYl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~ 104 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDG--IYLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQE 104 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCc--eEeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHH
Confidence 678999999999999999999999999762 3321 11233344445556678899999 6999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 009598 274 LKANPNSYAVVVSTENITQ 292 (531)
Q Consensus 274 L~~~~~~~aLVVstE~~S~ 292 (531)
+..+..+-+|.-++|++|.
T Consensus 105 I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 105 ICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hhcCcceEEEecCcccccc
Confidence 9999889999999999996
No 135
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=93.92 E-value=0.046 Score=45.75 Aligned_cols=76 Identities=17% Similarity=0.253 Sum_probs=47.3
Q ss_pred HHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEE---ecCCCchHHHHHHHHHHHHHHcCCCCeEEEEE
Q 009598 210 FEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYN---LGGMGCSAGLISIELAKNLLKANPNSYAVVVS 286 (531)
Q Consensus 210 L~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fd---l~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVs 286 (531)
|+++|++++|||.+|.... .......+.+++|++++....+ ..+++|+....+|..+.+-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999997642 2345566899999985533333 34467777777776554422334678888887
Q ss_pred ecc
Q 009598 287 TEN 289 (531)
Q Consensus 287 tE~ 289 (531)
.-.
T Consensus 77 ~G~ 79 (90)
T PF08541_consen 77 FGA 79 (90)
T ss_dssp EET
T ss_pred EEh
Confidence 643
No 136
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=93.89 E-value=0.18 Score=54.53 Aligned_cols=91 Identities=13% Similarity=0.259 Sum_probs=64.6
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCC--------CchHHHHHHHHHHHHH
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGM--------GCSAGLISIELAKNLL 274 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~--------gCsg~l~AL~lA~~lL 274 (531)
..|++++|+++|++++|||.+.++-. .........+++|+.. ..+|++|- |++|....+.+..+|.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 47999999999999999999986621 1233456778899864 45677763 6888888888888887
Q ss_pred HcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 009598 275 KANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSN 320 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~ 320 (531)
+.+ .++.| ++.|..|-.|+|+||++
T Consensus 392 ~~g-~~~Gl--------------------~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGL--------------------VTMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEE--------------------EEEEeeccceeEEEEEe
Confidence 644 33432 23466677778888875
No 137
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=93.33 E-value=0.27 Score=51.71 Aligned_cols=83 Identities=16% Similarity=0.206 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee--E---EecCCCchHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT--Y---NLGGMGCSAGLISIELAKN 272 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~--f---dl~g~gCsg~l~AL~lA~~ 272 (531)
....+..+++++|+++|++++|||.+++... .+.+...+.+++|++++-.. + ++.++++++...+|.-+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 3445668999999999999999999996632 23355668999999753222 1 6677888888888876644
Q ss_pred HHHcCCCCeEEEEE
Q 009598 273 LLKANPNSYAVVVS 286 (531)
Q Consensus 273 lL~~~~~~~aLVVs 286 (531)
. ..+++++|+++
T Consensus 282 ~--~~~Gd~vll~~ 293 (345)
T TIGR00748 282 I--AEPGDRILAVS 293 (345)
T ss_pred h--cCCCCEEEEEE
Confidence 2 22344444443
No 138
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.26 E-value=0.35 Score=51.55 Aligned_cols=88 Identities=16% Similarity=0.210 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHc-----CCCCCce---eEEecCCCchHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHY-----KLRDDIK---TYNLGGMGCSAGLISIEL 269 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~L-----Gl~~~~~---~fdl~g~gCsg~l~AL~l 269 (531)
..+...++++++|+++|++++|||.+|.... .+.+-..+.++| |++++-. --++.+.+|++...+|..
T Consensus 270 ~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~ 345 (378)
T PRK06816 270 IVVYTIKPLLELVDKRNLDPDDIDYFLPHYS----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDE 345 (378)
T ss_pred hHHHHHHHHHHHHHHcCCChhhCCEEeeCcc----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHH
Confidence 4455688899999999999999999996532 344456677776 7864321 125566788888888876
Q ss_pred HHHHHHcCCCCeEEEEEecc
Q 009598 270 AKNLLKANPNSYAVVVSTEN 289 (531)
Q Consensus 270 A~~lL~~~~~~~aLVVstE~ 289 (531)
|..-=+-.+++++++.+.|.
T Consensus 346 a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 346 LLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHHcCCCCCCCEEEEEEecc
Confidence 63311123578899888876
No 139
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=92.24 E-value=0.31 Score=50.52 Aligned_cols=85 Identities=13% Similarity=0.179 Sum_probs=57.1
Q ss_pred hcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee---EEecCCCchHHHHHHHHHHH
Q 009598 196 VEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT---YNLGGMGCSAGLISIELAKN 272 (531)
Q Consensus 196 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~---fdl~g~gCsg~l~AL~lA~~ 272 (531)
+.+.+...++++++|+++|++++|||.+++.. +.+.+-..+.+++|++++-.. -+.+++++++...+|+.+
T Consensus 223 ~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~-- 296 (326)
T PRK05963 223 TEAVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA-- 296 (326)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 34566677889999999999999999988743 235566778999999754332 133345555555555433
Q ss_pred HHHc---CCCCeEEEEEe
Q 009598 273 LLKA---NPNSYAVVVST 287 (531)
Q Consensus 273 lL~~---~~~~~aLVVst 287 (531)
++. .+++++|+++.
T Consensus 297 -~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 -NLEQPLREGERLLFAAA 313 (326)
T ss_pred -HHhCCCCCCCEEEEEEE
Confidence 333 24677777775
No 140
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.19 E-value=0.39 Score=49.97 Aligned_cols=87 Identities=15% Similarity=0.224 Sum_probs=58.8
Q ss_pred hcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEE---ecCCCchHHHHHHHHHHH
Q 009598 196 VEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYN---LGGMGCSAGLISIELAKN 272 (531)
Q Consensus 196 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fd---l~g~gCsg~l~AL~lA~~ 272 (531)
++......++++++|+++|++++|||.+++... .+..-..+.+++|++++-...+ ..++++++...+|..+
T Consensus 235 ~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~----~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~-- 308 (338)
T PRK09258 235 KEGVELAVDTWEAFLAQLGWAVEQVDRVICHQV----GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA-- 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCC----CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH--
Confidence 345566777899999999999999999886642 2345668999999975333222 4555666666666544
Q ss_pred HHHc---CCCCeEEEEEecc
Q 009598 273 LLKA---NPNSYAVVVSTEN 289 (531)
Q Consensus 273 lL~~---~~~~~aLVVstE~ 289 (531)
++. .+++++|+++...
T Consensus 309 -~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 -AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred -HHhCCCCCCCEEEEEEech
Confidence 333 2467888877543
No 141
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=92.06 E-value=0.13 Score=52.21 Aligned_cols=94 Identities=14% Similarity=0.184 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
..+++.+|...+|+++.++.+.||.+|+.+. ...-+-.++..-+-.-|.+..+++-.+. |+|-+.-.|+-..-.|+.+
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEee
Confidence 5788999999999999999999999999875 3455566666666667888778888899 8999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009598 277 NPNSYAVVVSTENITQ 292 (531)
Q Consensus 277 ~~~~~aLVVstE~~S~ 292 (531)
+..+.++--+.|.+|.
T Consensus 145 g~~dvivaggvelmsd 160 (465)
T KOG1392|consen 145 GNADVIVAGGVELMSD 160 (465)
T ss_pred CCcCEEEEcceeeccc
Confidence 8777666667888885
No 142
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=91.82 E-value=0.56 Score=48.28 Aligned_cols=78 Identities=12% Similarity=0.115 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCC---CceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVNC-SLFNPVPSLSSMIVNHYKLRD---DIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~---~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
+-..++++++|+++|++++|||.++... +......-........++.++ ....-++.++++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 4456799999999999999999999774 333323333333444444310 111235666788888888887777666
Q ss_pred cC
Q 009598 276 AN 277 (531)
Q Consensus 276 ~~ 277 (531)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 54
No 143
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.03 E-value=0.43 Score=49.53 Aligned_cols=82 Identities=10% Similarity=0.183 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeE---EecCCCchHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTY---NLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~f---dl~g~gCsg~l~AL~lA~~lL 274 (531)
+.....++++++|+++|++++|||.+++.... ......++++||++++.... +..+.+|+....+|.. ++
T Consensus 228 ~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~----~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~---~~ 300 (329)
T PRK07204 228 SSKYLMKFIDKLLMDAGYTLADIDLIVPHQAS----GPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE---AI 300 (329)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---HH
Confidence 45556788999999999999999999876421 22456889999997543332 3344445555555543 34
Q ss_pred HcC---CCCeEEEEE
Q 009598 275 KAN---PNSYAVVVS 286 (531)
Q Consensus 275 ~~~---~~~~aLVVs 286 (531)
+.+ +++++|+++
T Consensus 301 ~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 301 KQKKVQRGNKILLLG 315 (329)
T ss_pred HcCCCCCCCEEEEEE
Confidence 443 456676665
No 144
>PRK04262 hypothetical protein; Provisional
Probab=90.98 E-value=0.5 Score=49.66 Aligned_cols=68 Identities=16% Similarity=0.285 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee--E---EecCCCchHHHHHHHHHH
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT--Y---NLGGMGCSAGLISIELAK 271 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~--f---dl~g~gCsg~l~AL~lA~ 271 (531)
....++++++|+++|++++|||.+++.. +.+.+-..++++||++++-.. + +.+++++++...+|.-+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 4567789999999999999999988663 224456678999999754222 2 556666677666765543
No 145
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.74 E-value=0.49 Score=48.69 Aligned_cols=84 Identities=10% Similarity=0.139 Sum_probs=54.7
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeE---EecCCCchHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTY---NLGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~f---dl~g~gCsg~l~AL~lA~~l 273 (531)
.......++++++|+++|++++|||.++... ..+..-.++..++|++++-... +..+++|+..+..|. ++
T Consensus 216 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~~ 288 (319)
T PRK09352 216 FAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---EA 288 (319)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---HH
Confidence 3445567799999999999999999998653 2345567799999997532222 233345555555553 33
Q ss_pred HHcC---CCCeEEEEEe
Q 009598 274 LKAN---PNSYAVVVST 287 (531)
Q Consensus 274 L~~~---~~~~aLVVst 287 (531)
++.+ +++++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 3567776664
No 146
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=90.64 E-value=5.1 Score=39.68 Aligned_cols=117 Identities=11% Similarity=0.030 Sum_probs=76.1
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCC----------------CCCc-HHHHHHH----HcCC--CCCceeE
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFN----------------PVPS-LSSMIVN----HYKL--RDDIKTY 253 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~----------------~~Ps-~a~~I~~----~LGl--~~~~~~f 253 (531)
....|++.++.+++++. .++|.+|++|.-+. ..|. ++.-|+| .+.+ +....+.
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~~t 108 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGPNT 108 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCceE
Confidence 36788999999988653 57888999875321 3441 2222222 2222 1234677
Q ss_pred EecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCC
Q 009598 254 NLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 254 dl~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~ 323 (531)
-|. .|=.++-.||.-|..+|+.+ .+.||||+.|-.....|..-... .....--|.|++|+....
T Consensus 109 al~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 109 ALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 788 48889999999999999999 89999999999766444432111 112235677888886543
No 147
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.55 E-value=0.91 Score=46.85 Aligned_cols=83 Identities=12% Similarity=0.157 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee---EEecCCCchHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT---YNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~---fdl~g~gCsg~l~AL~lA~~lL 274 (531)
+.....++++++|+++|++++|||.+++.. +.+.+...+.+++|++++-.. -++.+++|+....+|. .++
T Consensus 223 ~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~~ 295 (325)
T PRK12879 223 AVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LAL 295 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HHH
Confidence 344456788999999999999999998763 235556789999999743222 2344455666666664 334
Q ss_pred HcC---CCCeEEEEEe
Q 009598 275 KAN---PNSYAVVVST 287 (531)
Q Consensus 275 ~~~---~~~~aLVVst 287 (531)
+.+ +++++|+++.
T Consensus 296 ~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 296 EQGKIKPGDTLLLYGF 311 (325)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 543 3566776664
No 148
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=90.25 E-value=0.68 Score=47.70 Aligned_cols=84 Identities=13% Similarity=0.246 Sum_probs=55.1
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEE---ecCCCchHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYN---LGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fd---l~g~gCsg~l~AL~lA~~l 273 (531)
+..+...++++++|+++|++++|||.+++... .+..-..+++++|++++-...+ +.+++|+.-+.+|.-+
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~--- 288 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDEL--- 288 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHH---
Confidence 34455677899999999999999999996532 3456678999999975322222 3345556666666443
Q ss_pred HHcC---CCCeEEEEEe
Q 009598 274 LKAN---PNSYAVVVST 287 (531)
Q Consensus 274 L~~~---~~~~aLVVst 287 (531)
++.+ +++++|+++.
T Consensus 289 ~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3333 3566776664
No 149
>PRK06840 hypothetical protein; Validated
Probab=89.66 E-value=0.94 Score=47.22 Aligned_cols=79 Identities=20% Similarity=0.335 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeE---EecCCCchHHHHHHHHHHHHHHcC
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTY---NLGGMGCSAGLISIELAKNLLKAN 277 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~f---dl~g~gCsg~l~AL~lA~~lL~~~ 277 (531)
...++++++|+++|++++|||.++... ..+.+-..++++||++++- .+ +..+++|+..+.+|..+ ++.+
T Consensus 238 ~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~-~~~~~~~Gn~~sas~~~~L~~~---~~~~ 309 (339)
T PRK06840 238 NFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQ-AIYLDEYGHLGQLDQILSLHLA---LEQG 309 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHH-eEeHHhccchhhhhHHHHHHHH---HHcC
Confidence 456899999999999999999987532 1244456789999997432 22 44455666666666433 4443
Q ss_pred ---CCCeEEEEEe
Q 009598 278 ---PNSYAVVVST 287 (531)
Q Consensus 278 ---~~~~aLVVst 287 (531)
+++++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 4566666653
No 150
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=89.52 E-value=0.74 Score=49.07 Aligned_cols=83 Identities=10% Similarity=0.193 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeE---EecCCCchHHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTY---NLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~f---dl~g~gCsg~l~AL~lA~~lL 274 (531)
+....-++++++|+++|++++|||.+++... .+.+-..++++||++++-... +.+++++++...+|+-+ +
T Consensus 278 ~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~---~ 350 (379)
T PLN02326 278 AVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA---V 350 (379)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---H
Confidence 3445667889999999999999999886642 233456699999998543222 45556666666666544 3
Q ss_pred HcC---CCCeEEEEEe
Q 009598 275 KAN---PNSYAVVVST 287 (531)
Q Consensus 275 ~~~---~~~~aLVVst 287 (531)
+.+ +++++|+++.
T Consensus 351 ~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 351 RSGKVKKGDVIATAGF 366 (379)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 433 4566666653
No 151
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=89.49 E-value=1.5 Score=43.26 Aligned_cols=79 Identities=16% Similarity=0.091 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC---CCceeEEecCCCchHHHHHHHHHHHHH
Q 009598 199 DEVMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLR---DDIKTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 199 ~~la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~---~~~~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
.....++++++|+++|++++|||.++.. +.................+.+ .....-.+.+.++++++..|..+..-+
T Consensus 144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~ 223 (254)
T cd00327 144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLML 223 (254)
T ss_pred hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHH
Confidence 3446788999999999999999998866 333332332222233333332 011223455566666666666655545
Q ss_pred HcC
Q 009598 275 KAN 277 (531)
Q Consensus 275 ~~~ 277 (531)
+..
T Consensus 224 ~~~ 226 (254)
T cd00327 224 EHE 226 (254)
T ss_pred hCC
Confidence 543
No 152
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=89.48 E-value=1.4 Score=47.55 Aligned_cols=94 Identities=18% Similarity=0.226 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCC--------CchHHHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGM--------GCSAGLISIELAKNL 273 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~--------gCsg~l~AL~lA~~l 273 (531)
...|++++|+++|++|+|||++-++- ......-...+.||+.++-..+|.+|. |++|....++++++|
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei~d----afa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL 373 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIELNE----AFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQL 373 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCccCc----HhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHH
Confidence 36899999999999999999987431 112334456678888433456777762 345556666666666
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 009598 274 LKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSN 320 (531)
Q Consensus 274 L~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~ 320 (531)
-.. ..++.|+ +.|.-|..+.|+||++
T Consensus 374 ~~~-~~~~g~~--------------------~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 374 ERT-GGRFALC--------------------TMCIGVGQGIAIAIER 399 (400)
T ss_pred hhc-CCCeEEE--------------------EEcccCCceeEEEEEe
Confidence 432 2344333 3455566777777764
No 153
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=89.16 E-value=1.1 Score=48.41 Aligned_cols=91 Identities=16% Similarity=0.279 Sum_probs=59.3
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHHHH
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKNLL 274 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~lL 274 (531)
..|++++|+++|++++|||++=++- ..+...-...+.||+.+ ..+|++| .|++|....+.++..|-
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~d----aFa~~~l~~~e~lG~~~--~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~ 376 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELNE----AFASVVLRFMQALDIPH--DKVNVNGGAIAMGHPLGATGAMILGTVLDELE 376 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc----hhhHHHHHHHHHhCCCC--cCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999987541 12233445678888753 3556665 34555566666666664
Q ss_pred HcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 009598 275 KANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSN 320 (531)
Q Consensus 275 ~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~ 320 (531)
+.+ .++.| .+.|.=|-.|.|+||++
T Consensus 377 ~~~-~~~g~--------------------~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 377 RRG-KRTAL--------------------ITLCVGGGMGIATIIER 401 (402)
T ss_pred hcC-CCeEE--------------------EEEcccCCceeEEEEEe
Confidence 432 23333 34466677788888875
No 154
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=88.88 E-value=1.1 Score=48.24 Aligned_cols=94 Identities=18% Similarity=0.236 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCC--------CchHHHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGM--------GCSAGLISIELAKNL 273 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~--------gCsg~l~AL~lA~~l 273 (531)
...|++++|+++|++|+|||++-++- ..+...-...+.||+.++-..+|.+|- |++|....++++++|
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qL 374 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQL 374 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHH
Confidence 35799999999999999999987441 112333456678898543456777762 444555556666666
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 009598 274 LKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSN 320 (531)
Q Consensus 274 L~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~ 320 (531)
-.. ..++.| .+.|.-|-.+.|+|+++
T Consensus 375 r~~-~~~~g~--------------------~~~c~~gG~g~a~~~e~ 400 (401)
T PRK09050 375 ERT-GGRYAL--------------------CTMCIGVGQGIALAIER 400 (401)
T ss_pred Hhc-CCCeEE--------------------EEEcccccceeEEEEEe
Confidence 432 223333 23455566666777764
No 155
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=88.66 E-value=1.3 Score=45.46 Aligned_cols=84 Identities=13% Similarity=0.260 Sum_probs=56.4
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEE---ecCCCchHHHHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYN---LGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fd---l~g~gCsg~l~AL~lA~~l 273 (531)
...+...++++++|+++|++++|||.+++... .+..-..+.+++|++++-...+ +.+++++..+.+|.-+
T Consensus 220 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~--- 292 (320)
T cd00830 220 FAVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA--- 292 (320)
T ss_pred HHHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH---
Confidence 45566778999999999999999999886632 3445567899999974432222 3344555555555433
Q ss_pred HHcC---CCCeEEEEEe
Q 009598 274 LKAN---PNSYAVVVST 287 (531)
Q Consensus 274 L~~~---~~~~aLVVst 287 (531)
++.+ +++++|+++.
T Consensus 293 ~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3443 5678888774
No 156
>PLN02287 3-ketoacyl-CoA thiolase
Probab=87.99 E-value=1.4 Score=48.26 Aligned_cols=96 Identities=16% Similarity=0.271 Sum_probs=62.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKNL 273 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~l 273 (531)
...|++++|+++|++|+|||++=++ .......-+..+.||+.+ ..+|++| .|++|....+.++++|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 4689999999999999999998544 011122233456788753 3555554 3667777777777777
Q ss_pred HHcCCC-CeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCC
Q 009598 274 LKANPN-SYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 274 L~~~~~-~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~~~ 323 (531)
-+.+.. ++. +.+.|.-|--|.|+||++.+.
T Consensus 407 ~~~~~~~~~g--------------------l~~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFG--------------------VVSMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCee--------------------EEEEccccCceeEEEEEecCc
Confidence 553310 232 334577777888999998664
No 157
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=87.94 E-value=1.6 Score=46.79 Aligned_cols=67 Identities=22% Similarity=0.312 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKNL 273 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~l 273 (531)
...|++++|+++|++|+|||.+=++- ..+...-+..+.||+.+ ..+|.+| .||+|...-++++++|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDP--ETVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCc--cccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 46799999999999999999986542 12334455677888763 2466665 4777777778888887
Q ss_pred H
Q 009598 274 L 274 (531)
Q Consensus 274 L 274 (531)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 5
No 158
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=87.88 E-value=1.4 Score=46.62 Aligned_cols=86 Identities=12% Similarity=0.146 Sum_probs=55.9
Q ss_pred hcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHH-cCCCC-Cce----eEEecCCCchHHHHHHHH
Q 009598 196 VEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNH-YKLRD-DIK----TYNLGGMGCSAGLISIEL 269 (531)
Q Consensus 196 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~-LGl~~-~~~----~fdl~g~gCsg~l~AL~l 269 (531)
+++.+.+.++++++|+++|++++|||.+++.... +.+-..+.++ +|+.. .-+ --+..+++|++...+|+.
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 3566667899999999999999999999876321 1222335566 56431 112 124566788888888877
Q ss_pred HHHHHHcCCCCeEEEEEe
Q 009598 270 AKNLLKANPNSYAVVVST 287 (531)
Q Consensus 270 A~~lL~~~~~~~aLVVst 287 (531)
+.+-+ .+++++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 64422 34567776663
No 159
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=87.50 E-value=2.3 Score=45.69 Aligned_cols=93 Identities=15% Similarity=0.236 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKNL 273 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~l 273 (531)
...|++++|+++|++|+|||.+-++-. .+...-...+.||+.. ..+|++| .|++|....++++.++
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d~----f~~~~~~~~e~lg~~~--~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l 366 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANEA----FAAQSLAVGKELGWDA--AKVNVNGGAIALGHPIGASGCRVLVTLLHEM 366 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCc----cHHHHHHHHHHhCCCC--ccCCcCCCHHHhCccHHHHHHHHHHHHHHHH
Confidence 457999999999999999999876421 2233445667888742 2445554 1333333444444433
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeC
Q 009598 274 LKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSNK 321 (531)
Q Consensus 274 L~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~~ 321 (531)
=+. ..++. +.+.|.-|-.++|+||+++
T Consensus 367 ~~~-~~~~g--------------------l~~~c~~gG~g~a~~~e~~ 393 (393)
T PRK05656 367 IRR-DAKKG--------------------LATLCIGGGQGVALAIERD 393 (393)
T ss_pred HHc-CCCEE--------------------EEEEcccCcceEEEEEecC
Confidence 221 12332 3345666667888888763
No 160
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=87.50 E-value=1.5 Score=39.41 Aligned_cols=70 Identities=21% Similarity=0.374 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKNL 273 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~l 273 (531)
...|++++|+++|++++|||.+=++-. .-+..-...+.+|+.+ ..+|.+| .||+|...-++++++|
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHH
Confidence 467999999999999999999976621 1123455677888863 4667666 5788888888888888
Q ss_pred HHcC
Q 009598 274 LKAN 277 (531)
Q Consensus 274 L~~~ 277 (531)
-+.+
T Consensus 98 ~~~~ 101 (123)
T PF02803_consen 98 RRRG 101 (123)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 6653
No 161
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=87.44 E-value=2.1 Score=45.89 Aligned_cols=91 Identities=15% Similarity=0.210 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKN 272 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~ 272 (531)
...|++++|+++|++|+|||++=++ +- +...-+..+.||+.. ..+|.+| .||+|....++++++
T Consensus 287 ~~~a~~~al~~agl~~~did~~ei~d~F-----~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gatG~~~v~e~~~q 359 (387)
T PRK07850 287 PVQATAKVLEKAGMKIGDIDLVEINEAF-----ASVVLSWAQVHEPDM--DKVNVNGGAIALGHPVGSTGARLITTALHE 359 (387)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeeecccc-----hHHHHHHHHHcCCCC--CCcCCCCchhhcCCCcchhHHHHHHHHHHH
Confidence 4689999999999999999999765 32 222334447788753 3666665 245555666677777
Q ss_pred HHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 009598 273 LLKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSN 320 (531)
Q Consensus 273 lL~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~ 320 (531)
|-+. ..++.|+ +.|.-|..++|+||++
T Consensus 360 L~~~-~~~~g~~--------------------~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 360 LERT-DKSTALI--------------------TMCAGGALSTGTIIER 386 (387)
T ss_pred HHhc-CCCeEEE--------------------EEccccCceeEEEEEe
Confidence 6543 2334332 3466677777787764
No 162
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=86.73 E-value=2 Score=44.57 Aligned_cols=81 Identities=11% Similarity=0.160 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeE---EecCCCchHHHHHHHHHHHHHHc
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTY---NLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~f---dl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
...-.+++++|+++|++++|||.+++... .+.....+.++||++++-... +..+++|++...+|.-+ ++.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~ 298 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQN 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 44566789999999999999999987642 234556799999997443322 33445666666666544 343
Q ss_pred C---CCCeEEEEEe
Q 009598 277 N---PNSYAVVVST 287 (531)
Q Consensus 277 ~---~~~~aLVVst 287 (531)
+ +++++|+++.
T Consensus 299 g~~~~Gd~vll~~~ 312 (326)
T CHL00203 299 NKIQPGQIIVLSGF 312 (326)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 4567777663
No 163
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=86.26 E-value=1.7 Score=46.90 Aligned_cols=94 Identities=18% Similarity=0.337 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-ceeEEecC--------CCchHHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDD-IKTYNLGG--------MGCSAGLISIELAKN 272 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~-~~~fdl~g--------~gCsg~l~AL~lA~~ 272 (531)
...|++++|+++|++|+|||++-++- ..+...-+..+.||+.++ ...+|.+| .|++|...-+.++++
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~d----~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~q 375 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELNE----AFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRE 375 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeecc----HHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHH
Confidence 36799999999999999999987441 112233445567776531 01356665 244444455555555
Q ss_pred HHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 009598 273 LLKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSN 320 (531)
Q Consensus 273 lL~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~ 320 (531)
|-+. ..++. +.+.|.-|..|.|+||++
T Consensus 376 L~~~-~~~~g--------------------l~~~c~~gg~g~a~~~e~ 402 (404)
T PRK06205 376 LQRR-QARYG--------------------LETMCIGGGQGLAAVFER 402 (404)
T ss_pred HHhc-CCCeE--------------------EEEEeccCChhhEEEEEe
Confidence 5432 12232 334566677788888875
No 164
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=86.17 E-value=2 Score=45.96 Aligned_cols=74 Identities=19% Similarity=0.254 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKN 272 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~ 272 (531)
...|++++|+++|++|+|||++=++ +- ....-.-.+.||+..+ .+|.+| .||+|....+.++.+
T Consensus 287 ~~~A~~~al~~Agl~~~DiDv~Ei~daF-----a~~~l~~le~lgl~g~--~vN~~GG~la~GHP~GatG~~~~~~l~~q 359 (388)
T PRK06366 287 PIPATRKLLEKQNKSIDYYDLVEHNEAF-----SIASIIVRDQLKIDNE--RFNVNGGAVAIGHPIGNSGSRIIVTLINA 359 (388)
T ss_pred HHHHHHHHHHHcCCCHHHcceeeccchh-----HHHHHHHHHHhCCCCC--ccCCCCchhhhCCCcCCCHHHHHHHHHHH
Confidence 3689999999999999999998655 31 2234456678888643 677776 578888888888888
Q ss_pred HHHcCCCCeEE
Q 009598 273 LLKANPNSYAV 283 (531)
Q Consensus 273 lL~~~~~~~aL 283 (531)
|-+.+ .++.|
T Consensus 360 L~~~~-~~~g~ 369 (388)
T PRK06366 360 LKTRH-MKTGL 369 (388)
T ss_pred HHhcC-CCeEE
Confidence 86543 34443
No 165
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=86.15 E-value=4.5 Score=43.20 Aligned_cols=84 Identities=11% Similarity=-0.052 Sum_probs=51.2
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhh
Q 009598 418 KLAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCN 497 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~ 497 (531)
.+|||.+=+|-.-....-...+.||+.++.+.++ --+--+||...++-...+.++..+=+-+.+.+.+.-..|.|-...
T Consensus 297 ~~did~~e~~d~Fa~~~~~~~e~lG~~~~pvN~~-GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~~~gl~~~~gggg~~~ 375 (382)
T PRK07801 297 IDDIDVVEINEAFAPVVLAWLKETGADPAKVNPN-GGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTAN 375 (382)
T ss_pred HHHcCEeeecccchHHHHHHHHHhCCCchhcCCC-cchhhhcCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccccee
Confidence 3789999999887777777789999998877543 223347888777655555444432110222333333455555555
Q ss_pred eeeeE
Q 009598 498 SAVWR 502 (531)
Q Consensus 498 s~v~r 502 (531)
+++++
T Consensus 376 ~~vl~ 380 (382)
T PRK07801 376 VTIIE 380 (382)
T ss_pred EEEEE
Confidence 55554
No 166
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=85.40 E-value=6.8 Score=42.10 Aligned_cols=58 Identities=9% Similarity=-0.071 Sum_probs=42.9
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchH---HHHHHHHHhc
Q 009598 418 KLAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSL---WYELAYTEGK 476 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi---~~~La~~~~~ 476 (531)
++|||.+=+|-.-....-...+.||+.++.+.++= -+--+||...++= ...|.+.+++
T Consensus 305 ~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~G-G~la~Ghp~gatG~r~~~~l~~~lr~ 365 (390)
T PRK06504 305 IDDIDLYEVNEAFASVPLAWLKATGADPERLNVNG-GAIALGHPLGASGTKLMTTLVHALKQ 365 (390)
T ss_pred HHHCCEEEecccchHHHHHHHHHhCCCCCCcCCCC-cHHhcCCCcchhHHHHHHHHHHHHHh
Confidence 38999999999887777788899999988775532 2334788876655 6666666654
No 167
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=85.24 E-value=1.8 Score=45.69 Aligned_cols=88 Identities=11% Similarity=0.169 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC-C--c--eeEEecCCCchHHHHHHHHHHHHH
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRD-D--I--KTYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~-~--~--~~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
-..++++++|+++|++|+|||.|+.. ++..+-....+..+.+-+|-.. . + ..-.+...+.+++...+-.+-..+
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~ 314 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAAS 314 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHH
Confidence 35689999999999999999998865 4332222222333444444211 1 1 111233233444444444444455
Q ss_pred HcC--CCCeEEEEEec
Q 009598 275 KAN--PNSYAVVVSTE 288 (531)
Q Consensus 275 ~~~--~~~~aLVVstE 288 (531)
+.+ +..++||.++.
T Consensus 315 ~~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 315 RKGYGPGPNVLCHLSD 330 (348)
T ss_pred HcCcCCCCcEEEEecC
Confidence 555 46789988854
No 168
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=85.20 E-value=6.8 Score=42.08 Aligned_cols=84 Identities=8% Similarity=-0.008 Sum_probs=48.1
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEE-EEEeChhHhh
Q 009598 418 KLAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVW-QIAFGSGFKC 496 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl-~i~fGsG~~~ 496 (531)
++|||.+-+|-.-...--...+.||+.++.+.++ -..--+||...+|=...+.++..+=+-+.|.+.+ .++.|.|. -
T Consensus 306 ~~did~~ei~d~f~~~~l~~~e~lg~~~~~vN~~-GG~~a~Ghp~gasG~~~~~el~~qL~~~~~~~g~~~~c~~gg~-g 383 (391)
T PRK07661 306 LSDIGLFELNEAFASQSIQVIRELGLDEEKVNVN-GGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGM-G 383 (391)
T ss_pred HHHCCEEEeCCHHHHHHHHHHHHcCCCCCCCCCC-CChHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccCh-h
Confidence 3899999998776655555668999988777553 3344467776665444444333321112333333 33444443 3
Q ss_pred heeeeEE
Q 009598 497 NSAVWRA 503 (531)
Q Consensus 497 ~s~v~r~ 503 (531)
.+++|+.
T Consensus 384 ~a~~~e~ 390 (391)
T PRK07661 384 AAGVFEL 390 (391)
T ss_pred hEEEEEe
Confidence 4666664
No 169
>PRK09051 beta-ketothiolase; Provisional
Probab=84.86 E-value=2.1 Score=46.08 Aligned_cols=92 Identities=18% Similarity=0.339 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKNL 273 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~l 273 (531)
...|++++|+++|++|+|||++=++- ..+...-...+.||+.+ ..+|.+| .|++|....+.++++|
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L 367 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNGSGISLGHPVGATGAIITVKALYEL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCccHHHhcchHHHHHHHHHHHHHHHH
Confidence 36899999999999999999986541 12334455678899853 4666665 2344444555555555
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 009598 274 LKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSN 320 (531)
Q Consensus 274 L~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~ 320 (531)
-+.+ .++. +.+.|.-|-.|.|+||++
T Consensus 368 ~~~~-~~~g--------------------~~~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 368 QRIG-GRYA--------------------LVTMCIGGGQGIAAIFER 393 (394)
T ss_pred HhcC-CCEE--------------------EEEEccccChhhEEEEEe
Confidence 4322 2232 223466666677777764
No 170
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=83.99 E-value=4.6 Score=43.42 Aligned_cols=84 Identities=18% Similarity=0.076 Sum_probs=50.2
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCE-EEEEEeChhHhh
Q 009598 418 KLAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDR-VWQIAFGSGFKC 496 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~-Vl~i~fGsG~~~ 496 (531)
++|||.+=+|-.-....-...+.||+.++++.++ -..--+||...++=...+.++..+=+=+.|++ |..++.|.|..
T Consensus 312 ~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~~-GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~g- 389 (397)
T PRK06954 312 AAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVN-GGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEA- 389 (397)
T ss_pred HHHCCEEehhhHHHHHHHHHHHHhCCCcccCCcC-CChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccchh-
Confidence 3789999888776554444568899998887543 33445788877774444444333211134555 44455555543
Q ss_pred heeeeEE
Q 009598 497 NSAVWRA 503 (531)
Q Consensus 497 ~s~v~r~ 503 (531)
.+++++.
T Consensus 390 ~a~~~e~ 396 (397)
T PRK06954 390 TAMGIEL 396 (397)
T ss_pred hEEEEEe
Confidence 4566553
No 171
>PRK05790 putative acyltransferase; Provisional
Probab=83.85 E-value=7.3 Score=41.70 Aligned_cols=84 Identities=11% Similarity=-0.061 Sum_probs=50.4
Q ss_pred ccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhhe
Q 009598 419 LAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNS 498 (531)
Q Consensus 419 ~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s 498 (531)
+|||.+-+|-.-....-...+.||+.+..+.++ --.--+||...++=...+.++..+=+=+.+.+.+.-.-|.|....+
T Consensus 309 ~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~~~gl~~~~~~~g~g~~ 387 (393)
T PRK05790 309 ADLDLIEINEAFAAQALAVEKELGLDPEKVNVN-GGAIALGHPIGASGARILVTLLHEMKRRGAKKGLATLCIGGGQGVA 387 (393)
T ss_pred HHCCEEEeCcHHHHHHHHHHHHhCCChhhcCCC-cchhhhCcchhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCCceeE
Confidence 799999998765444445678899987776543 2344489987777555555544421112333444444555555667
Q ss_pred eeeEE
Q 009598 499 AVWRA 503 (531)
Q Consensus 499 ~v~r~ 503 (531)
++++.
T Consensus 388 ~~~e~ 392 (393)
T PRK05790 388 LIVER 392 (393)
T ss_pred EEEEc
Confidence 77663
No 172
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=83.83 E-value=5.2 Score=42.77 Aligned_cols=82 Identities=12% Similarity=-0.075 Sum_probs=48.9
Q ss_pred ccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhhe
Q 009598 419 LAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNS 498 (531)
Q Consensus 419 ~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s 498 (531)
+|||.+-+|-...-..-...+.||+....+.++ -.+--+||+..++-...+.++..+=+=+.+.+.+.-+.+.|-.-.+
T Consensus 304 ~did~~e~~d~fa~~~~~~~e~lG~~~~pvn~~-GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gG~g~~ 382 (386)
T TIGR01930 304 SDIDLFEINEAFAAQVLACIKELGLDLEKVNVN-GGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGGGQGIA 382 (386)
T ss_pred HHCCeeehcchhHHHHHHHHHHhCCChhhcCCC-CChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEeccCCceEE
Confidence 799999999777555555668899865555322 2333578988777666666555431112445555544554433344
Q ss_pred eee
Q 009598 499 AVW 501 (531)
Q Consensus 499 ~v~ 501 (531)
+++
T Consensus 383 ~~~ 385 (386)
T TIGR01930 383 VIL 385 (386)
T ss_pred EEe
Confidence 443
No 173
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=83.65 E-value=2.2 Score=45.55 Aligned_cols=41 Identities=12% Similarity=0.250 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLR 247 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 247 (531)
...|++++++++|++|+|||.+-.. +. +....+..+.||+.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~d~f-----~~~~~~~~e~lg~~ 328 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEINEAF-----AAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeechh-----HHHHHHHHHHhCCC
Confidence 3589999999999999999988644 21 12334456778875
No 174
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=82.60 E-value=4.1 Score=43.92 Aligned_cols=93 Identities=17% Similarity=0.283 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHH
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKN 272 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~ 272 (531)
-...|++++|+++|++|+|||++-++- ......-...+.||+.+ ..+|.+| .|++|....+.++.+
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~ 371 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHG 371 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHH
Confidence 346899999999999999999986431 11223344567788752 2344444 245555555666655
Q ss_pred HHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 009598 273 LLKANPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSN 320 (531)
Q Consensus 273 lL~~~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~ 320 (531)
|-+.+ .++.| .+.|.-|-.|+|+||++
T Consensus 372 L~~~~-~~~g~--------------------~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 372 LRRTN-LKYGM--------------------VTMCVGTGMGAAGIFER 398 (399)
T ss_pred HHhcC-CCeEE--------------------EEEcccCCceeEEEEEe
Confidence 54322 23322 23466677777777764
No 175
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=82.22 E-value=5.1 Score=42.70 Aligned_cols=94 Identities=18% Similarity=0.259 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC-----CCceeE-EecCCCchHHHHHHHHHHH
Q 009598 199 DEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLR-----DDIKTY-NLGGMGCSAGLISIELAKN 272 (531)
Q Consensus 199 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~-----~~~~~f-dl~g~gCsg~l~AL~lA~~ 272 (531)
-.-...|+++.+++.|.+|+|.|.+++.. |.|-+....+..+|.+ +..... .++++.|.+.+.+| |.-
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as~ 281 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--ASL 281 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HHH
Confidence 34467799999999999999999999764 3445556666666654 444444 68889999888665 333
Q ss_pred HHHcC-CCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 009598 273 LLKAN-PNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAVLLSN 320 (531)
Q Consensus 273 lL~~~-~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAvLLs~ 320 (531)
|=++. +++++|+++ ||.||+|-..+-
T Consensus 282 L~~a~~~G~rIl~~S----------------------YGSGa~s~~fs~ 308 (377)
T COG3425 282 LDNAKLPGDRILLFS----------------------YGSGAGSEAFSI 308 (377)
T ss_pred HhhcCCCCCEEEEEe----------------------eCCCcceeEEEE
Confidence 33333 455665544 577887766653
No 176
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=81.54 E-value=8.6 Score=41.53 Aligned_cols=84 Identities=10% Similarity=-0.063 Sum_probs=48.2
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEE-EEeChhHhh
Q 009598 418 KLAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQ-IAFGSGFKC 496 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~-i~fGsG~~~ 496 (531)
++|||.+=+|-.-....-...+.||+.++.+.++ -..--+||...++-...+.++..+=+-+.|-..+. ++.|.|. -
T Consensus 320 ~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~-GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~gg~-g 397 (406)
T PRK07851 320 IDDIDLVEINEAFAAQVLPSARELGIDEDKLNVS-GGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQ-G 397 (406)
T ss_pred HHHCCeehhhhHHHHHHHHHHHHhCCCccccCCC-CChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccCh-h
Confidence 3789988777654443334458899977666432 23445899888777666665554322234444443 3344443 4
Q ss_pred heeeeEE
Q 009598 497 NSAVWRA 503 (531)
Q Consensus 497 ~s~v~r~ 503 (531)
.+++++.
T Consensus 398 ~a~~~e~ 404 (406)
T PRK07851 398 MAMVLER 404 (406)
T ss_pred hEEEEEe
Confidence 5666654
No 177
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=81.42 E-value=8 Score=41.55 Aligned_cols=82 Identities=12% Similarity=-0.024 Sum_probs=49.7
Q ss_pred ccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEE-EEeChhHhhh
Q 009598 419 LAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQ-IAFGSGFKCN 497 (531)
Q Consensus 419 ~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~-i~fGsG~~~~ 497 (531)
+|||.+=+|-.-....-...+.||+.++.+.++ --.--+||...++=...+.++..+=+-+.|++-+. +..|.|. -.
T Consensus 309 ~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG~-g~ 386 (393)
T PRK08235 309 EDIDLFEINEAFAAVALASTEIAGIDPEKVNVN-GGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGGQ-GD 386 (393)
T ss_pred HHCCeehhcchhHHHHHHHHHHhCCCcccCCcC-CchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-eE
Confidence 789999888776666666788999988777543 22334788877665555544443211135555443 3444553 45
Q ss_pred eeeeE
Q 009598 498 SAVWR 502 (531)
Q Consensus 498 s~v~r 502 (531)
+++|+
T Consensus 387 a~~~e 391 (393)
T PRK08235 387 AVLIE 391 (393)
T ss_pred EEEEE
Confidence 56655
No 178
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=81.34 E-value=2.4 Score=44.38 Aligned_cols=88 Identities=20% Similarity=0.302 Sum_probs=56.6
Q ss_pred hhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCce--eEEecCCCchHHHHHHHHH
Q 009598 193 EARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIK--TYNLGGMGCSAGLISIELA 270 (531)
Q Consensus 193 ~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~--~fdl~g~gCsg~l~AL~lA 270 (531)
+--+.+..++.++++++|+++|++++|||.+|... ....+-..+++++|++++-. .++-.| .+++..+-|.+.
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~~~~~~~yG-NtsaAsiplaL~ 290 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKVVVTVDKYG-NTSAASIPLALD 290 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHHhhHHHHhc-ccccchHHHHHH
Confidence 34556889999999999999999999999999542 33455677999999975433 333333 444444333333
Q ss_pred HHHHHcC---CCCeEEEEE
Q 009598 271 KNLLKAN---PNSYAVVVS 286 (531)
Q Consensus 271 ~~lL~~~---~~~~aLVVs 286 (531)
.. ++.+ ++.++|+++
T Consensus 291 ~~-~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 291 EA-LREGRIKPGDLVLLEA 308 (323)
T ss_pred HH-hhhCCCCCCCEEEEEe
Confidence 32 2333 345555444
No 179
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=81.34 E-value=5.3 Score=42.85 Aligned_cols=69 Identities=25% Similarity=0.396 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCc-eeEEecC--------CCchHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDDI-KTYNLGG--------MGCSAGLISIELAK 271 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~~-~~fdl~g--------~gCsg~l~AL~lA~ 271 (531)
...|++++++++|++|+|||.+=++ + .+...-+..+.||+-+.. ..+|.+| .||+|....+.+++
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d~-----F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~ 358 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNEA-----FAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLN 358 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeccc-----chHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHH
Confidence 3678899999999999999998654 3 123344556778873221 2455554 36677666666666
Q ss_pred HHHH
Q 009598 272 NLLK 275 (531)
Q Consensus 272 ~lL~ 275 (531)
+|-+
T Consensus 359 ~L~~ 362 (387)
T PRK08947 359 LMER 362 (387)
T ss_pred HHHh
Confidence 6643
No 180
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=81.14 E-value=3.3 Score=44.68 Aligned_cols=70 Identities=17% Similarity=0.257 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCC--------CchHHHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGM--------GCSAGLISIELAKNL 273 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~--------gCsg~l~AL~lA~~l 273 (531)
...|++++|+++|++|+|||++-++- ..+...-+..+.||+.++-..+|.+|- |++|....++++++|
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~D----~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qL 373 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELNE----AFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQL 373 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccCc----HHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHH
Confidence 36799999999999999999886431 122334556778898544356677651 345555666666666
Q ss_pred HH
Q 009598 274 LK 275 (531)
Q Consensus 274 L~ 275 (531)
-.
T Consensus 374 r~ 375 (400)
T TIGR02430 374 ER 375 (400)
T ss_pred Hh
Confidence 43
No 181
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=80.49 E-value=3.5 Score=43.44 Aligned_cols=87 Identities=10% Similarity=0.080 Sum_probs=58.8
Q ss_pred cHHHHHHHHHHHHHHhc--CCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc------eeEEecCCCchHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKT--GVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDI------KTYNLGGMGCSAGLISIE 268 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~a--gi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~------~~fdl~g~gCsg~l~AL~ 268 (531)
.+.....++++++|+++ |++++|||.+++... .+.+-..+.+++|++++- .--+.+++++++...+|.
T Consensus 256 ~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~----~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 256 LVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPG----GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHHHHhccccCCCccccceEEEECCC----ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 34556777899999999 999999999987653 123455689999997432 123566677777777776
Q ss_pred HHHHHHHcCCCCeEEEEEe
Q 009598 269 LAKNLLKANPNSYAVVVST 287 (531)
Q Consensus 269 lA~~lL~~~~~~~aLVVst 287 (531)
.+.+-=+..+++++|+++.
T Consensus 332 ~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 332 YMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHhCCCCCCCEEEEEEE
Confidence 6543111124567776663
No 182
>PLN03169 chalcone synthase family protein; Provisional
Probab=80.07 E-value=5 Score=43.10 Aligned_cols=87 Identities=14% Similarity=0.235 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee------EEecCCCchHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT------YNLGGMGCSAGLISIELAK 271 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~------fdl~g~gCsg~l~AL~lA~ 271 (531)
+..-.-..++++|+++|++++|||.+.+...+.+ +.+-..++++||++++-.. -+.+++++++...+|+.+.
T Consensus 279 ~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n--~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~ 356 (391)
T PLN03169 279 IEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGG--PAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMR 356 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCC--HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHH
Confidence 4444566779999999999999994433322222 4566779999999854322 2667788888888887654
Q ss_pred HH--HH-cCCCCeEEEEE
Q 009598 272 NL--LK-ANPNSYAVVVS 286 (531)
Q Consensus 272 ~l--L~-~~~~~~aLVVs 286 (531)
+- ++ ..+++++|.++
T Consensus 357 ~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 357 EELKKKGEEDEEWGLILA 374 (391)
T ss_pred HhhcccCCCCCcEEEEEE
Confidence 21 11 11345666555
No 183
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=78.89 E-value=6 Score=41.76 Aligned_cols=43 Identities=12% Similarity=0.253 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRD 248 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~ 248 (531)
-...|++++|+++|++++|||++=++ |- +...-+..+.||+.+
T Consensus 252 ~~~~a~~~al~~Agl~~~did~~ei~d~F-----~~~~l~~~e~lGl~~ 295 (375)
T cd00829 252 AARLAARRAYKMAGITPDDIDVAELYDCF-----TIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCcC-----hHHHHHHHHHcCCCC
Confidence 35689999999999999999998655 42 334556667788764
No 184
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=78.66 E-value=6 Score=39.09 Aligned_cols=59 Identities=14% Similarity=0.172 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC-cHHHHHHHHcCCCCCceeEEecC
Q 009598 199 DEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP-SLSSMIVNHYKLRDDIKTYNLGG 257 (531)
Q Consensus 199 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-s~a~~I~~~LGl~~~~~~fdl~g 257 (531)
.+.....++++|.++|+++.|||.|+|++.|+..+- -+..-+++-|.+.-+++.+.++.
T Consensus 38 se~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 38 AERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 456778899999999999999999999999876544 33444555565555677888884
No 185
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=78.13 E-value=6.1 Score=42.05 Aligned_cols=70 Identities=14% Similarity=0.207 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHH
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKN 272 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~ 272 (531)
-...|++++|+++|++|+|||.+..+- ..........+.+|+.+ ..+|.+| .|++|......+..+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~q 332 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHH
Confidence 457899999999999999999997652 12233455667888853 3445542 477777777777777
Q ss_pred HHHc
Q 009598 273 LLKA 276 (531)
Q Consensus 273 lL~~ 276 (531)
+-+.
T Consensus 333 l~~~ 336 (361)
T PRK06690 333 AKRE 336 (361)
T ss_pred HHHh
Confidence 7553
No 186
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=77.46 E-value=6.7 Score=42.15 Aligned_cols=52 Identities=6% Similarity=-0.139 Sum_probs=33.3
Q ss_pred ccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHH
Q 009598 419 LAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELA 471 (531)
Q Consensus 419 ~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La 471 (531)
+|||.+-+|-.-....-...+.||+.++++.++ -..--+||...++=...+.
T Consensus 308 ~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~-GG~~a~GHp~gatG~r~~~ 359 (392)
T PRK07108 308 DDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVN-GGAIAVGHPYGVSGARLTG 359 (392)
T ss_pred HHcCchHhhhHHHHHHHHHHHhcCCCccccCCC-CChHHhCcchhhhHHHHHH
Confidence 789998888655444344578899988877543 2334478876665444333
No 187
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=77.41 E-value=6.6 Score=43.63 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCC-ceeEEecCCCch--------HHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDD-IKTYNLGGMGCS--------AGLISIELAK 271 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~-~~~fdl~g~gCs--------g~l~AL~lA~ 271 (531)
+..|++++++++|++++|||++=+. |- |...-+..+.||+.++ -..+|++| |.- .++.++--+.
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elydcF-----~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v 367 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYSCF-----PSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMV 367 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEeccCC-----HHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHH
Confidence 3469999999999999999998543 42 3444556688998643 23566665 332 2444544344
Q ss_pred HHHHcCCCCeEEEEE
Q 009598 272 NLLKANPNSYAVVVS 286 (531)
Q Consensus 272 ~lL~~~~~~~aLVVs 286 (531)
.-|+..+.+++||.+
T Consensus 368 ~QLRg~~~~~gLv~~ 382 (498)
T PRK08257 368 ERLRANPGRRGLVTA 382 (498)
T ss_pred HHHhhcCCCEEEEEC
Confidence 444444455665543
No 188
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=75.96 E-value=29 Score=37.74 Aligned_cols=85 Identities=11% Similarity=-0.081 Sum_probs=45.4
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcC-----------------CCcccccccccccccccccccchHHHHHHHHHhcCCCC
Q 009598 418 KLAFEHFCIHSGGRAVLDEIQKNLQ-----------------LRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVA 480 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~v~~~Lg-----------------l~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~ 480 (531)
.+|||.+-+|-.-....-...+.|+ ++.+.+.++=- +--+||...++-...+.++..+=+=+
T Consensus 326 ~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG-~la~GhP~gasG~~~~~e~~~qLrg~ 404 (428)
T PRK08963 326 LADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGG-SIAYGHPFAATGARMITQTLHELRRR 404 (428)
T ss_pred HHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCC-HHhcCCCccccHHHHHHHHHHHHhhc
Confidence 3889999999876544334444442 33334433211 22378876555555544444432224
Q ss_pred CCCEEEEEEeChhHhhheeeeEE
Q 009598 481 RGDRVWQIAFGSGFKCNSAVWRA 503 (531)
Q Consensus 481 ~GD~Vl~i~fGsG~~~~s~v~r~ 503 (531)
.|++.+...-+.|-...+++++.
T Consensus 405 ~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 405 GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred CCCEEEEEEccccChhhEEEEEe
Confidence 56776554444444456666664
No 189
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=75.53 E-value=6.9 Score=40.12 Aligned_cols=92 Identities=9% Similarity=0.095 Sum_probs=58.7
Q ss_pred hhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC-Cce------eEEecCCCchHHHHH
Q 009598 194 ARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRD-DIK------TYNLGGMGCSAGLIS 266 (531)
Q Consensus 194 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~-~~~------~fdl~g~gCsg~l~A 266 (531)
..+.+......+++++|+++|++ +|||.++...... |..-..+.+++++++ ++. .-++++++|+....+
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 34456777889999999999999 9999887653211 156677889999742 111 224455666666666
Q ss_pred HHHHHHHHHcCCCCeEEEEEecc
Q 009598 267 IELAKNLLKANPNSYAVVVSTEN 289 (531)
Q Consensus 267 L~lA~~lL~~~~~~~aLVVstE~ 289 (531)
|..+-.--+-.+++++|+++.-.
T Consensus 293 L~~~~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 293 LASLLESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHHHHhcCCCCCCCEEEEEEecc
Confidence 65442211112467888877543
No 190
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=75.13 E-value=11 Score=40.33 Aligned_cols=67 Identities=27% Similarity=0.452 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCc-eeEEecC--------CCchHHHHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDDI-KTYNLGG--------MGCSAGLISIELAK 271 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~~-~~fdl~g--------~gCsg~l~AL~lA~ 271 (531)
...|++++++++|++|+|||.+=++ + .....-...+.||+-+.- ..+|.+| .|++|.-..+.++
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~da-----Fa~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~- 355 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELNEA-----FAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLL- 355 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEccc-----cHHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHH-
Confidence 4678999999999999999988654 2 123334455778863210 3455554 3555555555555
Q ss_pred HHH
Q 009598 272 NLL 274 (531)
Q Consensus 272 ~lL 274 (531)
+++
T Consensus 356 ~~l 358 (385)
T TIGR02445 356 NLM 358 (385)
T ss_pred HHH
Confidence 444
No 191
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=74.87 E-value=31 Score=36.81 Aligned_cols=57 Identities=11% Similarity=-0.126 Sum_probs=40.8
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCCcc------------------cccccccccccccccccchHHHHHHHHHh
Q 009598 418 KLAFEHFCIHSGGRAVLDEIQKNLQLRDW------------------HMEPSRMTLHRFGNTSSSSLWYELAYTEG 475 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~v~~~Lgl~~e------------------~~e~S~~~l~r~GNtsSaSi~~~La~~~~ 475 (531)
++|||.+-+|-......-...+.||+.+. .+.+|=- +--+||...++=.+.+.++..
T Consensus 277 ~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG-~la~Ghp~gasG~~~~~e~~~ 351 (389)
T PRK07516 277 LDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGG-LKAKGHPIGATGVSMHVLAAM 351 (389)
T ss_pred HHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCC-cccCCCCccHHHHHHHHHHHH
Confidence 38999999999988777777899999875 3432222 335899987777666665544
No 192
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=73.63 E-value=7 Score=41.71 Aligned_cols=73 Identities=12% Similarity=0.141 Sum_probs=45.6
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCC-----------ceeEEecCCCchHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCS-LFNPVPSLSSMIVNHYKLRDD-----------IKTYNLGGMGCSAGL 264 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~-----------~~~fdl~g~gCsg~l 264 (531)
...+...++.+++|+++|++++|||.+++..- ......+. .++.++++.+.+ ...=.+++++|++..
T Consensus 202 ~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~ 280 (379)
T TIGR01835 202 QYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLY 280 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHH
Confidence 34455678899999999999999999987651 11112222 235566665421 112266667777777
Q ss_pred HHHHHH
Q 009598 265 ISIELA 270 (531)
Q Consensus 265 ~AL~lA 270 (531)
.+|.-+
T Consensus 281 l~L~~~ 286 (379)
T TIGR01835 281 LGLASL 286 (379)
T ss_pred HHHHHH
Confidence 777544
No 193
>PRK06059 lipid-transfer protein; Provisional
Probab=73.18 E-value=19 Score=38.62 Aligned_cols=68 Identities=24% Similarity=0.209 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCC----------------ceeEEecC-------
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDD----------------IKTYNLGG------- 257 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~----------------~~~fdl~g------- 257 (531)
...|++++++++|++|+|||++=++ |. ........+.||+.+. -..+|.+|
T Consensus 275 ~~~a~~~a~~~agl~~~Did~~El~d~f-----~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Gh 349 (399)
T PRK06059 275 KDQILDAAYAEAGIGPEDLSLAEVYDLS-----TALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGE 349 (399)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEeecccC-----hHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCc
Confidence 3578999999999999999998655 31 1122333477777532 12566665
Q ss_pred -CCchHHHHHHHHHHHHH
Q 009598 258 -MGCSAGLISIELAKNLL 274 (531)
Q Consensus 258 -~gCsg~l~AL~lA~~lL 274 (531)
.||+|....++++.+|-
T Consensus 350 p~gatG~~~~~e~~~qLr 367 (399)
T PRK06059 350 AIPAQAIAQVCELTWQLR 367 (399)
T ss_pred cCCccHHHHHHHHHHHhc
Confidence 34555555566666654
No 194
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=72.80 E-value=12 Score=39.90 Aligned_cols=69 Identities=17% Similarity=0.277 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCC----------------ceeEEecC-------
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDD----------------IKTYNLGG------- 257 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~----------------~~~fdl~g------- 257 (531)
...|++++++++|++|+|||.+-.. +.+ ...-+..+.||+.+. -..+|.+|
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Gh 334 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGH 334 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCC
Confidence 4578999999999999999998654 432 234556677777321 12456554
Q ss_pred -CCchHHHHHHHHHHHHHH
Q 009598 258 -MGCSAGLISIELAKNLLK 275 (531)
Q Consensus 258 -~gCsg~l~AL~lA~~lL~ 275 (531)
.||+|....+.++.+|-.
T Consensus 335 p~~a~G~~~~~e~~~qL~g 353 (389)
T PRK06064 335 PVGATGVSQAVEIVWQLRG 353 (389)
T ss_pred CcchhHHHHHHHHHHHHhC
Confidence 245565566666666653
No 195
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=72.41 E-value=18 Score=39.02 Aligned_cols=78 Identities=12% Similarity=0.126 Sum_probs=42.9
Q ss_pred ccccEEEEcCCCHHHHHHH--HHHcCCCcccccccccccccccccccch---HHHHHHHHHhcCCCCCCCE-EEEEEeCh
Q 009598 419 LAFEHFCIHSGGRAVLDEI--QKNLQLRDWHMEPSRMTLHRFGNTSSSS---LWYELAYTEGKGRVARGDR-VWQIAFGS 492 (531)
Q Consensus 419 ~did~f~~Hq~g~~vi~~v--~~~Lgl~~e~~e~S~~~l~r~GNtsSaS---i~~~La~~~~~gri~~GD~-Vl~i~fGs 492 (531)
+|||++=+|-.- .+..+ .+.|+++..++.+| -..--+||.-.++ ..+++.+.++. +.|.+ +..++.|.
T Consensus 308 ~DID~~ei~daf--a~~~l~~~~~l~~~~~~vN~s-Gg~~a~GHplgAtG~~~~~~~~~qL~~---~~~~~g~~~~c~~g 381 (392)
T PRK06633 308 NDLEVIEVNEAF--AAQSIYVNREMKWDMEKVNIN-GGAIAIGHPIGASGGRVLITLIHGLRR---AKAKKGLVTLCIGG 381 (392)
T ss_pred HHcCeeehhhHH--HHHHHHHHhhhCCCccccCCC-CchHhhCCcHHHHHHHHHHHHHHHHHh---cCCCeEEEEEeccc
Confidence 789999888433 23333 57788876666543 3445589987777 33444444432 22333 22334444
Q ss_pred hHhhheeeeEE
Q 009598 493 GFKCNSAVWRA 503 (531)
Q Consensus 493 G~~~~s~v~r~ 503 (531)
|. -.+++++.
T Consensus 382 G~-g~a~~~e~ 391 (392)
T PRK06633 382 GM-GMAMCVEA 391 (392)
T ss_pred Ch-hheEEEEe
Confidence 43 34666664
No 196
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=72.09 E-value=20 Score=38.99 Aligned_cols=25 Identities=20% Similarity=0.363 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN 226 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ 226 (531)
...|++++|+++|++|+|||++=++
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei~ 333 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEIN 333 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec
Confidence 4589999999999999999998665
No 197
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=71.80 E-value=9.5 Score=39.49 Aligned_cols=36 Identities=11% Similarity=0.053 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC
Q 009598 199 DEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP 234 (531)
Q Consensus 199 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P 234 (531)
.+.....++++|+++|++++|||.+.++..|...+.
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tg 84 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGS 84 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhh
Confidence 455677899999999999999999999998875444
No 198
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=71.68 E-value=9.9 Score=40.84 Aligned_cols=69 Identities=20% Similarity=0.226 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCC----------------ceeEEecC-------
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDD----------------IKTYNLGG------- 257 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~----------------~~~fdl~g------- 257 (531)
...|++++|+++|++|+|||++=++ +- +...-+..+.||+.+. -..+|.+|
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d~F-----a~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Gh 345 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHDAF-----AANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGH 345 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhhhh-----HHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCC
Confidence 4689999999999999999988655 31 2233445567776531 13566655
Q ss_pred -CCchHHHHHHHHHHHHHH
Q 009598 258 -MGCSAGLISIELAKNLLK 275 (531)
Q Consensus 258 -~gCsg~l~AL~lA~~lL~ 275 (531)
.||+|....++++++|-.
T Consensus 346 P~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 346 PIGASGAAICAELCFELKG 364 (393)
T ss_pred CccccHHHHHHHHHHHHhh
Confidence 467777788888888754
No 199
>PRK08256 lipid-transfer protein; Provisional
Probab=71.00 E-value=13 Score=39.73 Aligned_cols=68 Identities=19% Similarity=0.310 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCC----------------ceeEEecC-------
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDD----------------IKTYNLGG------- 257 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~----------------~~~fdl~g------- 257 (531)
...|++++++++|++++|||++-+. +- +...-+..+.||+.+. -..+|.+|
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d~f-----~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Gh 340 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHDCF-----SANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGH 340 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeeccCC-----cHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCC
Confidence 4579999999999999999998655 31 2334445577777542 12566665
Q ss_pred -CCchHHHHHHHHHHHHH
Q 009598 258 -MGCSAGLISIELAKNLL 274 (531)
Q Consensus 258 -~gCsg~l~AL~lA~~lL 274 (531)
.||+|.....+++++|-
T Consensus 341 p~gasG~~~~~e~~~QL~ 358 (391)
T PRK08256 341 PLGATGLAQCAELTWQLR 358 (391)
T ss_pred CccHHHHHHHHHHHHHhc
Confidence 35566666666666664
No 200
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=70.92 E-value=13 Score=37.07 Aligned_cols=85 Identities=16% Similarity=0.262 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCc-HHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcC
Q 009598 199 DEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPS-LSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKAN 277 (531)
Q Consensus 199 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps-~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~ 277 (531)
......-++.+|++++++++|||.+-+.-.|..-.|- ..+.+++-+.+=-|.+-..++ .|-|- |.+.+- +...
T Consensus 50 r~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigH---IEMGR~-iTgA 123 (336)
T KOG2708|consen 50 RAWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGH---IEMGRE-ITGA 123 (336)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhh---hhhcce-eccC
Confidence 3445667788999999999999999888788776773 334455555432255566666 67653 344332 3223
Q ss_pred CCCeEEEEEecc
Q 009598 278 PNSYAVVVSTEN 289 (531)
Q Consensus 278 ~~~~aLVVstE~ 289 (531)
.+-.+|-||+-+
T Consensus 124 ~nPvvLYvSGGN 135 (336)
T KOG2708|consen 124 QNPVVLYVSGGN 135 (336)
T ss_pred CCCEEEEEeCCc
Confidence 467888888776
No 201
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=69.57 E-value=25 Score=38.25 Aligned_cols=26 Identities=15% Similarity=0.227 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVN 226 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~ 226 (531)
....|++++++++|++|+|||++=++
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 34579999999999999999999665
No 202
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=68.78 E-value=1.4 Score=38.83 Aligned_cols=77 Identities=16% Similarity=0.214 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC---CceeE----EecCCCchHHHHHHHHHHH
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRD---DIKTY----NLGGMGCSAGLISIELAKN 272 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~---~~~~f----dl~g~gCsg~l~AL~lA~~ 272 (531)
-..++++++|+++|++|+|||.|... ++...-.+.-+.-+.+-|+-.. .+..- .+.....++++.+|-.+--
T Consensus 26 ~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l 105 (119)
T PF02801_consen 26 ALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALL 105 (119)
T ss_dssp HHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHH
Confidence 34788999999999999999999855 4432223344455555555321 12222 2233455666666666665
Q ss_pred HHHcC
Q 009598 273 LLKAN 277 (531)
Q Consensus 273 lL~~~ 277 (531)
.++.+
T Consensus 106 ~l~~~ 110 (119)
T PF02801_consen 106 ALEHG 110 (119)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 55543
No 203
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=67.72 E-value=13 Score=39.27 Aligned_cols=69 Identities=17% Similarity=0.167 Sum_probs=48.0
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee-E--E-ecCCCchHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT-Y--N-LGGMGCSAGLISIEL 269 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-f--d-l~g~gCsg~l~AL~l 269 (531)
.+....-.+++++|+++|++++|||.+|+... .+.+-..+.++||++++-.. . + .++++.++...+|+-
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~----~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~ 311 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQS----NAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCE 311 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHH
Confidence 34555667899999999999999999997642 23456789999999854322 1 2 344566666666653
No 204
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=67.11 E-value=12 Score=39.92 Aligned_cols=42 Identities=14% Similarity=0.131 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRD 248 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~ 248 (531)
...|++++|+++|++|+|||++-+. +.+ ...-+..+.||+.+
T Consensus 259 ~~~a~~~al~~Agi~~~DiD~~ei~d~ft-----~~~l~~le~lGl~~ 301 (385)
T PRK12578 259 TQLAARQAYNMAKVTPNDIEVATVHDAFT-----IAEIMGYEDLGFTE 301 (385)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCcCh-----HHHHHHHHHcCCCC
Confidence 4579999999999999999997544 322 34455667788753
No 205
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=67.06 E-value=8.4 Score=37.32 Aligned_cols=37 Identities=14% Similarity=0.262 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP 234 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P 234 (531)
-.+.....++++|+++|++++|||.++++..|+..+.
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTG 69 (202)
T TIGR03725 33 HSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTG 69 (202)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHh
Confidence 4566778999999999999999999999998876555
No 206
>PRK09604 UGMP family protein; Validated
Probab=66.56 E-value=14 Score=38.74 Aligned_cols=49 Identities=10% Similarity=0.099 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC-----cHHHHHHHHcCC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP-----SLSSMIVNHYKL 246 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl 246 (531)
-.+.....++++|+++|++++|||.+.+++.|...+. +.|..++..++.
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC
Confidence 3566788899999999999999999999988865433 234445555554
No 207
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=66.37 E-value=15 Score=40.12 Aligned_cols=69 Identities=19% Similarity=0.283 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCC----------------ceeEEecC-------
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDD----------------IKTYNLGG------- 257 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~----------------~~~fdl~g------- 257 (531)
+..|++++++++|++|+|||++=++ +- +...-+..+.||+.+. -..+|.+|
T Consensus 311 ~~~A~~~a~~~AGl~~~DiD~~Ei~daF-----a~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GH 385 (438)
T PTZ00455 311 SRAAAQKALSMAGVKPSDLQVAEVHDCF-----TIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGH 385 (438)
T ss_pred HHHHHHHHHHHcCCCHHHCcEeeecccC-----hHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCC
Confidence 4789999999999999999999655 32 2334456677777542 13677776
Q ss_pred -CCchHHHHHHHHHHHHHH
Q 009598 258 -MGCSAGLISIELAKNLLK 275 (531)
Q Consensus 258 -~gCsg~l~AL~lA~~lL~ 275 (531)
.||+|....++++.+|-.
T Consensus 386 P~gAtG~~~v~e~~~QLrg 404 (438)
T PTZ00455 386 PVGATGVKQIMEVYRQMKG 404 (438)
T ss_pred CcchHHHHHHHHHHHHHhh
Confidence 245555555666666643
No 208
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=65.09 E-value=44 Score=36.09 Aligned_cols=52 Identities=12% Similarity=-0.086 Sum_probs=30.8
Q ss_pred ccccEEEEcCCCHHHHHHHHHHcCCCc--ccccccccccccccccccchHHHHHH
Q 009598 419 LAFEHFCIHSGGRAVLDEIQKNLQLRD--WHMEPSRMTLHRFGNTSSSSLWYELA 471 (531)
Q Consensus 419 ~did~f~~Hq~g~~vi~~v~~~Lgl~~--e~~e~S~~~l~r~GNtsSaSi~~~La 471 (531)
+|||.+=+|-.--...-...+.||+.. ..+.++-- +--+||...++=...+.
T Consensus 314 ~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~GG-~la~GhP~gAtG~~~~~ 367 (401)
T PRK08131 314 DDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGG-AIAVGHPLGASGARLAL 367 (401)
T ss_pred HHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCCcc-HHhcCCchhhhHHHHHH
Confidence 789999888766544445678899853 34432211 22378886555333333
No 209
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=65.07 E-value=15 Score=38.80 Aligned_cols=47 Identities=15% Similarity=0.126 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKL 246 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 246 (531)
+-...|++++|+++|++|+|||.+-.. |++..-.+.-..-|.+-||-
T Consensus 206 ~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 206 DGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 346789999999999999999987644 54443345556667777763
No 210
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=65.06 E-value=28 Score=37.21 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKL 246 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 246 (531)
..++++++|+++|++|+|||.+... +++..-.+.-...|.+.+|-
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~ 307 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD 307 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCC
Confidence 3579999999999999999998755 44332234445556666663
No 211
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=64.20 E-value=11 Score=39.97 Aligned_cols=77 Identities=14% Similarity=0.116 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC-CCce----eEEecCCCchHHHHHHHHHHHHH
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLR-DDIK----TYNLGGMGCSAGLISIELAKNLL 274 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~-~~~~----~fdl~g~gCsg~l~AL~lA~~lL 274 (531)
-..++++++|+++|++++|||.+... +++..-.+.-+.-+.+-++-+ +.+. .-.+....+++|+..+-.+...|
T Consensus 276 ~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 355 (406)
T cd00834 276 GAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLAL 355 (406)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHH
Confidence 45678999999999999999999866 444333444445566656542 1111 11223345666666666666666
Q ss_pred HcC
Q 009598 275 KAN 277 (531)
Q Consensus 275 ~~~ 277 (531)
+.+
T Consensus 356 ~~~ 358 (406)
T cd00834 356 RDG 358 (406)
T ss_pred hcC
Confidence 654
No 212
>PRK14878 UGMP family protein; Provisional
Probab=64.04 E-value=11 Score=39.27 Aligned_cols=52 Identities=17% Similarity=0.162 Sum_probs=36.9
Q ss_pred hhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC-----cHHHHHHHHcCC
Q 009598 194 ARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP-----SLSSMIVNHYKL 246 (531)
Q Consensus 194 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl 246 (531)
.+...+.+. .+++++|+++|++++|||.+.++..|...+. +.+..++..++.
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~ 97 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK 97 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC
Confidence 344455554 8999999999999999999999988765443 224445555554
No 213
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=63.06 E-value=11 Score=39.98 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKL 246 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 246 (531)
...|++++|+++|++|+|||.+... +++..-.+.-...+...+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 5689999999999999999998755 54433344545556666664
No 214
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=62.64 E-value=17 Score=38.99 Aligned_cols=66 Identities=23% Similarity=0.285 Sum_probs=43.0
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHHH
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKNL 273 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~l 273 (531)
..+++++|+++|++|+|||.+=++ +. +...-...+.||+.+ ..+|.+| .|++|....++++.+|
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d~f-----~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l 366 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINEAF-----SVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVL 366 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCcHH-----HHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHH
Confidence 469999999999999999998754 21 223344566778642 2344443 2566666666666666
Q ss_pred HH
Q 009598 274 LK 275 (531)
Q Consensus 274 L~ 275 (531)
-.
T Consensus 367 ~~ 368 (394)
T PLN02644 367 RS 368 (394)
T ss_pred Hh
Confidence 43
No 215
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=62.08 E-value=9.2 Score=39.88 Aligned_cols=80 Identities=19% Similarity=0.115 Sum_probs=54.0
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccc---cccchHHHHHHHHHhcCCCCCCCE-EEEEEeChh
Q 009598 418 KLAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGN---TSSSSLWYELAYTEGKGRVARGDR-VWQIAFGSG 493 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GN---tsSaSi~~~La~~~~~gri~~GD~-Vl~i~fGsG 493 (531)
.+|+|+|=++-.-..+--...|.||++|+++..- -----.|| +|.+.+...|.+.+++ +.|.+ |.-+.-|.|
T Consensus 311 ~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv~-GGAValGHPlG~SGaRi~~tL~~~L~~---~~g~~GvAaiCnGGG 386 (396)
T KOG1390|consen 311 QSDVDYWEINEAFSVVVLANIKKLGLDPSKVNVH-GGAVALGHPLGMSGARILVTLLHTLEQ---KGGKIGVAAICNGGG 386 (396)
T ss_pred hhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccCC-CceeecCCCcCCcchhHHHHHHHHHHh---hCCceeEEEEecCCC
Confidence 4889999888888888888899999999998420 00112454 6778899999999885 12333 445566666
Q ss_pred HhhheeeeE
Q 009598 494 FKCNSAVWR 502 (531)
Q Consensus 494 ~~~~s~v~r 502 (531)
.. .+++++
T Consensus 387 ga-sa~vie 394 (396)
T KOG1390|consen 387 GA-SAMVIE 394 (396)
T ss_pred ce-eeEEEe
Confidence 53 344443
No 216
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=62.02 E-value=9 Score=38.96 Aligned_cols=55 Identities=15% Similarity=0.169 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC-----cHHHHHHHHcCCCCCceeEEecC
Q 009598 199 DEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP-----SLSSMIVNHYKLRDDIKTYNLGG 257 (531)
Q Consensus 199 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~~~~~~fdl~g 257 (531)
.+.....++++|++++++++|||.+.++..|+..++ +.|-.++..+ +++.+.++.
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~----~~Pli~v~~ 89 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALAL----NIPLIGVSH 89 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHT----T--EEEEEH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHh----CCCeEeecc
Confidence 344568899999999999999999999999876544 2233344444 355666763
No 217
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=61.86 E-value=13 Score=39.88 Aligned_cols=45 Identities=13% Similarity=0.164 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKL 246 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 246 (531)
...|++++|+++|++|+|||.+-.. +++..-.+.-..-+.+-+|-
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 4579999999999999999998754 54433344444456666663
No 218
>PRK00768 nadE NAD synthetase; Reviewed
Probab=60.24 E-value=2.1e+02 Score=29.34 Aligned_cols=150 Identities=15% Similarity=0.145 Sum_probs=75.8
Q ss_pred HHHHHHHhhccCCCCHH-----hHHHHHHHHHHcCCCeEEee-cCCCcCCCCCcchhhhhhcHHHHHHHHHHHHHHhcCC
Q 009598 142 MEAFLKMSEESSFFQEE-----SLQFQKRIASRASVGDETYL-SRGITSRPPNICIHEARVEADEVMFGALDSLFEKTGV 215 (531)
Q Consensus 142 ~~~~~~~~~~~~~~~~~-----~~~f~~ki~~~sGI~er~~~-~~~~~~~~~~~~l~~~~~ea~~la~~Aa~~aL~~agi 215 (531)
++++++.++....++.+ -.+|++..++++|...--+- ..+. + +.+...-+.+++..-+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~l~~~g~~g~VlGlSGGI-----D----------Sav~a~L~~~A~~~~~~ 67 (268)
T PRK00768 3 QQEIIAELGVKPTIDPEEEIRRRVDFLKDYLKKSGLKSLVLGISGGQ-----D----------STLAGRLAQLAVEELRA 67 (268)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEECCCCH-----H----------HHHHHHHHHHHHHHhcc
Confidence 45566665543344443 24577777888886653322 1121 0 11122223344443332
Q ss_pred CCCCcCEEEEe-ecCCC--CCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHH--------HHHHHHc--------
Q 009598 216 EPSDVGILIVN-CSLFN--PVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIEL--------AKNLLKA-------- 276 (531)
Q Consensus 216 ~p~dID~LI~~-ss~~~--~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~l--------A~~lL~~-------- 276 (531)
+-...+..+++ +.|.. .....+..+++.+|+. +...+||. .-..++...+.- |..=+++
T Consensus 68 ~~~~~~~~~~~l~mP~~~~~~~~da~~la~~lgi~-~~~~i~I~-~~~~~~~~~l~~~~~~~~~~a~~NiqARlRm~~Ly 145 (268)
T PRK00768 68 ETGDDDYQFIAVRLPYGVQADEDDAQDALAFIQPD-RVLTVNIK-PAVDASVAALEAAGIELSDFVKGNIKARERMIAQY 145 (268)
T ss_pred cccCcceeEEEEECCCCCcCCHHHHHHHHHhcCCC-eeEEEECH-HHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 22112222223 44532 2245678899999984 36888988 466666554421 2111111
Q ss_pred --CCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEE
Q 009598 277 --NPNSYAVVVSTENITQNWYSGNDRSMLLCNCLFRMGGAAV 316 (531)
Q Consensus 277 --~~~~~aLVVstE~~S~~~~~~~dr~~ll~~~lfgDGAaAv 316 (531)
......||++|.+.|..+ .| ..+.+|||++.+
T Consensus 146 ~~An~~~~lvlgT~N~sE~~-~G-------y~TkyGD~~~d~ 179 (268)
T PRK00768 146 AIAGATGGLVVGTDHAAEAV-TG-------FFTKFGDGGADI 179 (268)
T ss_pred HHHccCCCEEEcCCcccHHH-hC-------ceeccCCccccc
Confidence 112456888887766511 11 245778888776
No 219
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=59.99 E-value=25 Score=36.60 Aligned_cols=56 Identities=11% Similarity=0.063 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC-----cHHHHHHHHcCCCCCceeEEecC
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP-----SLSSMIVNHYKLRDDIKTYNLGG 257 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~~~~~~fdl~g 257 (531)
-.+.....++++|+++|++++|||.+.++..|...+. +.|.-++..++ ++.+.++.
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 3556778899999999999999999999998875443 23333444444 44566664
No 220
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=59.62 E-value=27 Score=37.66 Aligned_cols=71 Identities=15% Similarity=0.091 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC-CceeEEecCCCchHHHHHHHHHHHHHH
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRD-DIKTYNLGGMGCSAGLISIELAKNLLK 275 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~-~~~~fdl~g~gCsg~l~AL~lA~~lL~ 275 (531)
-..++++++|+++|+ |+|||.|... |++..-...-+..|.+.++.+- .+++ +.| -|-+..-++.++..++.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks--~~G-H~l~AAGa~e~i~~~la 353 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGPVRGIGT--LFG-HTMEAQFPLGLALAALS 353 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCCccccch--hhc-cchHHHHHHHHHHHHHH
Confidence 357899999999999 8999998755 5443333444556777777431 1222 333 34333334455544443
No 221
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=59.45 E-value=61 Score=35.32 Aligned_cols=19 Identities=32% Similarity=0.396 Sum_probs=15.7
Q ss_pred cccccccceEEEEEeeCCC
Q 009598 305 CNCLFRMGGAAVLLSNKAR 323 (531)
Q Consensus 305 ~~~lfgDGAaAvLLs~~~~ 323 (531)
..|...|||+|+||.+++.
T Consensus 265 ~~~~~~DGAaA~il~se~~ 283 (430)
T TIGR02446 265 NSTPLTDGAAAVILMREGR 283 (430)
T ss_pred hcCCCCCceEEEEEecHHH
Confidence 4678899999999997653
No 222
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=59.29 E-value=16 Score=38.99 Aligned_cols=46 Identities=15% Similarity=0.125 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYK 245 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 245 (531)
.-..++++++|+++|++|+|||.+... +++..-.+.-+..+.+-+|
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~ 320 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHh
Confidence 446789999999999999999998755 5443333444444555554
No 223
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=59.14 E-value=37 Score=36.51 Aligned_cols=42 Identities=19% Similarity=0.318 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRD 248 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~ 248 (531)
...|++++++++|++|+|||++-+. +. +...-+..+.||+.+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D~f-----a~~~l~~le~lGl~~ 320 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHDCF-----TPSEYLAIDHIGLTG 320 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeeccc-----hHHHHHHHHHcCCCC
Confidence 4579999999999999999998655 32 233455667778753
No 224
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=58.76 E-value=40 Score=36.71 Aligned_cols=41 Identities=15% Similarity=0.129 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhcCCC--CCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 009598 202 MFGALDSLFEKTGVE--PSDVGILIVN-CSLFNPVPSLSSMIVNHYKLR 247 (531)
Q Consensus 202 a~~Aa~~aL~~agi~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 247 (531)
...|++++++++|++ ++|||++=+. |. +...-+..+.||+.
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~F-----a~~~l~~lE~lGl~ 338 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELHDAY-----TSSEIQTYEDLGLC 338 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEeecCC-----cHHHHHHHHHcCCC
Confidence 458999999999997 7999999655 42 12233445666664
No 225
>PRK07855 lipid-transfer protein; Provisional
Probab=57.78 E-value=31 Score=36.99 Aligned_cols=25 Identities=24% Similarity=0.413 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN 226 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ 226 (531)
...|++++++++|++|+|||++=+.
T Consensus 268 ~~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 268 MGLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEec
Confidence 3479999999999999999998544
No 226
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=56.70 E-value=30 Score=36.50 Aligned_cols=85 Identities=13% Similarity=0.085 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC-cHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcCC
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP-SLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANP 278 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-s~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~~ 278 (531)
+-....++++|+++|++.+|||+|-++..|+-.-+ ..-...++.|-+.-+.+-+.++ -|-|=+.+-.+..+. ..
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a~~l~~~~---~~ 126 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVN--HLEGHIEAARLETGL---AF 126 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHHHHhccCC---CC
Confidence 34667889999999999999999998887764322 1123334444333345677787 566544443332221 12
Q ss_pred CCeEEEEEecc
Q 009598 279 NSYAVVVSTEN 289 (531)
Q Consensus 279 ~~~aLVVstE~ 289 (531)
.--+|+||+=.
T Consensus 127 p~v~LlVSGGH 137 (342)
T COG0533 127 PPVALLVSGGH 137 (342)
T ss_pred CcEEEEEecCc
Confidence 34677777655
No 227
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=56.40 E-value=30 Score=37.04 Aligned_cols=47 Identities=13% Similarity=0.173 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKL 246 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 246 (531)
.....+++++|+++|++|+|||.+... +++..-...-...+..-+|.
T Consensus 279 ~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 279 PAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 345679999999999999999999766 44322222333445555553
No 228
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=55.81 E-value=31 Score=37.30 Aligned_cols=47 Identities=9% Similarity=-0.031 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHh-cCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 009598 200 EVMFGALDSLFEK-TGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKL 246 (531)
Q Consensus 200 ~la~~Aa~~aL~~-agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 246 (531)
.-...|++++|++ +|++|+|||.+-.. |++..-.+.-..-+.+-+|-
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 3467899999999 99999999999755 54433233334456666664
No 229
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=55.58 E-value=27 Score=31.16 Aligned_cols=55 Identities=15% Similarity=0.183 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCC--CCCCcHHHHHHHHc-CCCCCceeEEecCCCc
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLF--NPVPSLSSMIVNHY-KLRDDIKTYNLGGMGC 260 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~L-Gl~~~~~~fdl~g~gC 260 (531)
..+-.++.+++.+++++||--++|..++| ...|+ ..++++ |+. +++-++...|.=
T Consensus 22 t~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~-~Vplmc~qEm~V 79 (117)
T TIGR01796 22 VAELLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWT-DVPVMCAQEIPV 79 (117)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCC-CcceeccCcCCC
Confidence 34455677789999999999999997764 44674 445566 887 787777765443
No 230
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=55.29 E-value=17 Score=37.89 Aligned_cols=37 Identities=16% Similarity=0.110 Sum_probs=28.9
Q ss_pred hhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCC
Q 009598 194 ARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFN 231 (531)
Q Consensus 194 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~ 231 (531)
.|+.++.+.. +++++|+++|++++|||.|.++..|..
T Consensus 42 ~~~H~~~l~~-~i~~~l~~~~~~~~did~Iavt~gPg~ 78 (322)
T TIGR03722 42 AEHHAEVAPK-LIKEALEEAGVSLEDIDAVAFSQGPGL 78 (322)
T ss_pred HHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEEecCCch
Confidence 3444555444 499999999999999999999987753
No 231
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=53.83 E-value=29 Score=39.07 Aligned_cols=45 Identities=11% Similarity=0.133 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKL 246 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 246 (531)
...+++++|+++|++|+|||.|-.. |++..-.+.-...|.+-||-
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 4689999999999999999988644 54433233445556677763
No 232
>PRK07937 lipid-transfer protein; Provisional
Probab=53.49 E-value=43 Score=35.51 Aligned_cols=75 Identities=15% Similarity=0.054 Sum_probs=45.8
Q ss_pred HHHHHHHHh-cCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceeEEecCC-------CchHHHHHHHHHHHHH
Q 009598 204 GALDSLFEK-TGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGM-------GCSAGLISIELAKNLL 274 (531)
Q Consensus 204 ~Aa~~aL~~-agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~-------gCsg~l~AL~lA~~lL 274 (531)
.++++++++ +|++|+|||++=+. | .+....+..+.||+..+ ..+|.+|- ||+|....++++.+|.
T Consensus 250 ~~~~~a~~~aAgi~~~diD~~Ei~D~-----F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~ 323 (352)
T PRK07937 250 PSTALAAEAATGGDAGGVDVAELHAP-----FTHQELILREALGLGDK-TKVNPSGGALAANPMFAAGLERIGEAARHIW 323 (352)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEeCC-----ChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhHHHHHHHHHHHHHHh
Confidence 444555555 59999999998554 3 23344557788998533 35666652 5555555566666664
Q ss_pred HcCCCCeEEEE
Q 009598 275 KANPNSYAVVV 285 (531)
Q Consensus 275 ~~~~~~~aLVV 285 (531)
.. ..+++|+.
T Consensus 324 g~-~a~~~l~~ 333 (352)
T PRK07937 324 DG-SARRALAH 333 (352)
T ss_pred cc-CCCEEEEe
Confidence 33 34556554
No 233
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=53.38 E-value=53 Score=35.12 Aligned_cols=42 Identities=10% Similarity=0.169 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhcCCC--CCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 009598 201 VMFGALDSLFEKTGVE--PSDVGILIVN-CSLFNPVPSLSSMIVNHYKLR 247 (531)
Q Consensus 201 la~~Aa~~aL~~agi~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 247 (531)
....|++++++++|++ ++|||++=+. |. +...-+..+.||+.
T Consensus 256 ~~~~a~~~a~~~Agi~~p~~Did~~el~d~F-----~~~~~~~~e~lGl~ 300 (386)
T PRK08313 256 AGRDAAAALWKAAGITDPRDEIDVAEIYVPF-----SWFEPMWLENLGFA 300 (386)
T ss_pred HHHHHHHHHHHHcCCCCChhhCCEEEeccCC-----hHHHHHHHHHcCCC
Confidence 3457999999999997 6999988543 42 22334455666664
No 234
>PRK12404 stage V sporulation protein AD; Provisional
Probab=52.47 E-value=51 Score=34.66 Aligned_cols=89 Identities=16% Similarity=0.253 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC------C--ceeEEe--------cCCCchHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRD------D--IKTYNL--------GGMGCSAGLI 265 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~------~--~~~fdl--------~g~gCsg~l~ 265 (531)
|+..+.+=|+++|.+|+|-|+||..- ....--.+...+..+-|+.- | +.-||- +|.|||+.+.
T Consensus 208 A~dti~~h~~d~~~~~~~yDlI~TGD-Lg~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~ 286 (334)
T PRK12404 208 AVDTIEAHLRDRQIDASYYDLIVTGD-LGHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVT 286 (334)
T ss_pred HHHHHHHHHHHhCCChhhccEEEEcc-hHHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHH
Confidence 56666777889999999999998652 11111233444444444421 1 123332 3457887776
Q ss_pred HHHHHHHHHHcCCCCeEEEEEecc-CCC
Q 009598 266 SIELAKNLLKANPNSYAVVVSTEN-ITQ 292 (531)
Q Consensus 266 AL~lA~~lL~~~~~~~aLVVstE~-~S~ 292 (531)
.=.+-+. ++.+..+++|+|+|-. +|+
T Consensus 287 ~g~~~~~-~~~g~~~rvL~v~TGALlS~ 313 (334)
T PRK12404 287 YGHLLNR-MKRGELKRILVVATGALLSP 313 (334)
T ss_pred HHHHHHH-HhcCCceEEEEEEchhhcCc
Confidence 6555544 4456789999999876 443
No 235
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=52.43 E-value=26 Score=37.69 Aligned_cols=47 Identities=11% Similarity=0.205 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKL 246 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 246 (531)
.-...|++++|+++|++|+|||.|... |++..-.+.-+..|.+-||-
T Consensus 270 ~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~ 317 (399)
T cd00832 270 PGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGP 317 (399)
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCC
Confidence 346788999999999999999987754 54444445555567777774
No 236
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=52.18 E-value=32 Score=36.41 Aligned_cols=49 Identities=14% Similarity=0.219 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC-----cHHHHHHHHcCCC
Q 009598 199 DEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP-----SLSSMIVNHYKLR 247 (531)
Q Consensus 199 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~ 247 (531)
.+-.-.+.+++|+++|.+|+|+|++-|...|+-+.+ +.|-.++.++..+
T Consensus 83 r~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 83 RENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 445677899999999999999999998888776544 4455566666543
No 237
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=51.66 E-value=24 Score=37.75 Aligned_cols=46 Identities=11% Similarity=0.240 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYK 245 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 245 (531)
.....|++++|+++|++|+|||.+... +++..-.+.-..-|.+-+|
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 346789999999999999999998754 5443333333445666665
No 238
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=51.66 E-value=32 Score=30.94 Aligned_cols=83 Identities=16% Similarity=0.063 Sum_probs=48.5
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEE-EEeChhHhh
Q 009598 418 KLAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQ-IAFGSGFKC 496 (531)
Q Consensus 418 ~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~-i~fGsG~~~ 496 (531)
.+|+|.|=+|-.--...-...+.||++++++.++=-.+. +||...+|=...+.++..+-+-+.|++.+. +..|.|. -
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la-~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~-g 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALA-LGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQ-G 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHH-H-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTE-E
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCccccccc-ccccccccccchhhhhHHHHHHhchhhhhHHhccccee-e
Confidence 389999999999988888899999999999876433444 788755554333333322111134566443 4455554 3
Q ss_pred heeeeE
Q 009598 497 NSAVWR 502 (531)
Q Consensus 497 ~s~v~r 502 (531)
.++++|
T Consensus 117 ~a~lle 122 (123)
T PF02803_consen 117 SAVLLE 122 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444444
No 239
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=51.65 E-value=68 Score=34.46 Aligned_cols=42 Identities=12% Similarity=0.234 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhcCCC--CCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC
Q 009598 202 MFGALDSLFEKTGVE--PSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRD 248 (531)
Q Consensus 202 a~~Aa~~aL~~agi~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~ 248 (531)
...|++++++++|++ ++|||++=++ +- ....-+..+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D~F-----s~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHDCF-----SITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEecCC-----hHHHHHHHHHcCCCC
Confidence 457999999999998 7999998544 32 223444556777653
No 240
>PRK06158 thiolase; Provisional
Probab=50.39 E-value=47 Score=35.52 Aligned_cols=41 Identities=10% Similarity=0.187 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLR 247 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 247 (531)
...|++++++++|++|+|||++=+. |- +...-+..+.||+.
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD~F-----s~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYDAF-----TINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecCCc-----hHHHHHHHHHcCCC
Confidence 4679999999999999999998544 42 22233444666654
No 241
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=49.11 E-value=38 Score=36.68 Aligned_cols=44 Identities=11% Similarity=0.157 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYK 245 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 245 (531)
..++++++|+++|++|+|||.+... +++....+.-..-|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 5688999999999999999999865 4433333433444555555
No 242
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=48.89 E-value=70 Score=33.65 Aligned_cols=89 Identities=17% Similarity=0.266 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC--C---C--ceeEEe--------cCCCchHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLR--D---D--IKTYNL--------GGMGCSAGLIS 266 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~--~---~--~~~fdl--------~g~gCsg~l~A 266 (531)
|+..+.+=|+++|.+|+|-|++|..- ....--.+...+..+-|+. . | +.-||- +|-|||+.+..
T Consensus 204 a~dti~~h~~d~~~~~~~yd~i~tgd-lg~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~ 282 (327)
T TIGR02845 204 AADTIEAHFKDTGRSVDDYDLIVTGD-LARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTY 282 (327)
T ss_pred HHHHHHHHHHHcCCChhhccEEEecc-hHHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHH
Confidence 56666777889999999999998652 1111123333444444431 0 1 123332 34577877766
Q ss_pred HHHHHHHHHcCCCCeEEEEEecc-CCC
Q 009598 267 IELAKNLLKANPNSYAVVVSTEN-ITQ 292 (531)
Q Consensus 267 L~lA~~lL~~~~~~~aLVVstE~-~S~ 292 (531)
=.+-+.+ +.+..+++|+|+|-. +|+
T Consensus 283 ~~~~~~~-~~g~~~r~l~v~tgalls~ 308 (327)
T TIGR02845 283 GHILKEM-LRGKLKKVLVVATGALLSP 308 (327)
T ss_pred HHHHHHH-hcCcceEEEEEEchhhcCc
Confidence 5555544 456789999999876 443
No 243
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=48.80 E-value=26 Score=39.09 Aligned_cols=59 Identities=10% Similarity=0.160 Sum_probs=40.1
Q ss_pred hhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC-----cHHHHHHHHcCCCCCceeEEecC
Q 009598 194 ARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP-----SLSSMIVNHYKLRDDIKTYNLGG 257 (531)
Q Consensus 194 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~~~~~~fdl~g 257 (531)
.+..++.+. .+++++|+++|++++|||.|.++..|+..+. +.|.-++..+|. +.+.++.
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~----~~~~v~h 108 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDV----PLIGVNH 108 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCC----CeecccH
Confidence 445556555 9999999999999999999999888764332 223334445554 4455554
No 244
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=48.54 E-value=46 Score=35.73 Aligned_cols=40 Identities=18% Similarity=0.149 Sum_probs=28.4
Q ss_pred HHHHHHHHHhcCCC--CCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 009598 203 FGALDSLFEKTGVE--PSDVGILIVN-CSLFNPVPSLSSMIVNHYKLR 247 (531)
Q Consensus 203 ~~Aa~~aL~~agi~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 247 (531)
..|++++++++|++ ++|||++-++ +- ....-+....||+.
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D~F-----t~~~l~~~e~lG~~ 301 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDDRY-----SYKELQHIEALRLS 301 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEecCC-----hHHHHHHHHHcCCC
Confidence 36999999999997 6999999765 32 12234455666664
No 245
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=48.17 E-value=52 Score=34.92 Aligned_cols=58 Identities=14% Similarity=0.203 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC-cHHHHHHHHcCCCCCceeEEecC
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP-SLSSMIVNHYKLRDDIKTYNLGG 257 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-s~a~~I~~~LGl~~~~~~fdl~g 257 (531)
+.....++++|+++|++++|||.+.++..|..... -.....++-|...-+++-+.++.
T Consensus 51 ~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~~~PligV~H 109 (345)
T PTZ00340 51 EHILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLWGKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHcCCCEeecch
Confidence 34567789999999999999999999888763221 11222333333222455667774
No 246
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=47.76 E-value=18 Score=35.41 Aligned_cols=40 Identities=28% Similarity=0.269 Sum_probs=26.8
Q ss_pred cccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhhe
Q 009598 459 GNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCNS 498 (531)
Q Consensus 459 GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~s 498 (531)
|+-.+.|.|...+.+++.=.+++||+|+=+|-|+|+....
T Consensus 50 ~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAl 89 (209)
T PF01135_consen 50 GCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAAL 89 (209)
T ss_dssp ETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHH
T ss_pred cceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHH
Confidence 3335666777778877766799999999999999987543
No 247
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=47.72 E-value=36 Score=36.78 Aligned_cols=45 Identities=13% Similarity=0.002 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYK 245 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 245 (531)
-...|++++|+++|++|+|||.+-.. |++..-.+.-+.-|.+-||
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 35778999999999999999998654 5544444555566777776
No 248
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=47.53 E-value=70 Score=34.37 Aligned_cols=45 Identities=16% Similarity=0.051 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYK 245 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 245 (531)
-..+|++++|+++|++|+|||.+-.. |++..-.+.-...+...||
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 46789999999999999999998644 5443333444556777776
No 249
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.44 E-value=35 Score=37.09 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC-C--c-eeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKLRD-D--I-KTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~-~--~-~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
+.+|.+.||+++|++|+|||.+-.. ||+..-...-+..|.+-+|=.. + + .+-.+.| -|-|..-+++.+..++.-
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tG-H~lGAaGaveai~~~l~l 356 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTG-HTLGAAGAVEAIISLLAL 356 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccc-cChhhHHHHHHHHHHHHH
Confidence 5689999999999999999999754 6655444545555666666221 1 1 1223443 444444455555555543
No 250
>PLN03170 chalcone synthase; Provisional
Probab=45.38 E-value=66 Score=34.73 Aligned_cols=71 Identities=11% Similarity=0.188 Sum_probs=48.2
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee-----E-EecCCCchHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT-----Y-NLGGMGCSAGLISIELA 270 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-----f-dl~g~gCsg~l~AL~lA 270 (531)
-+.+.....++++|+++|++++|||..++.-. .+.+-..+.++||++++-.. + +.++|+.++.+.+|+-.
T Consensus 278 ~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 35555667888999999999999998775532 34556678999999754321 2 34455556666666554
Q ss_pred H
Q 009598 271 K 271 (531)
Q Consensus 271 ~ 271 (531)
.
T Consensus 354 ~ 354 (401)
T PLN03170 354 R 354 (401)
T ss_pred H
Confidence 3
No 251
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=44.69 E-value=45 Score=35.47 Aligned_cols=47 Identities=15% Similarity=0.242 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 009598 199 DEVMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYK 245 (531)
Q Consensus 199 ~~la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 245 (531)
..-...|++++|+++|++|+|||.+... +++..-.+.-...|..-++
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~ 325 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFG 325 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHh
Confidence 3445689999999999999999999765 4432222223334444443
No 252
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=44.25 E-value=35 Score=36.77 Aligned_cols=44 Identities=16% Similarity=0.195 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYK 245 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 245 (531)
...+++++|+++|++|+|||.+... |++..-.+.-+..|.+-||
T Consensus 277 ~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 277 MQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 4689999999999999999998754 5544444555666777777
No 253
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=43.34 E-value=1.2e+02 Score=33.08 Aligned_cols=45 Identities=13% Similarity=0.115 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYK 245 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 245 (531)
-...|++++|+++|++|+|||.+-.. +++..-.+.-..-+..-+|
T Consensus 300 ~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 300 GAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 35678999999999999999998654 4432222333333444444
No 254
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=42.45 E-value=1.6e+02 Score=29.41 Aligned_cols=100 Identities=14% Similarity=0.261 Sum_probs=64.3
Q ss_pred HHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcH
Q 009598 157 EESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSL 236 (531)
Q Consensus 157 ~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~ 236 (531)
+++...++.+.++.|+.+.+..-.... . +-..++.-.++++.+....+++++++ +..|++|.+|... -.+
T Consensus 119 ~rs~~il~~lv~~~g~s~~~~~vrstd-l-~vL~l~~~~~~~~~~l~~~~~~a~~e-----dgAeaIiLGCAGm---s~l 188 (230)
T COG4126 119 ERSRPILEELVRSYGLSRHCRSVRSTD-L-PVLALEGPPEEAEALLVIEAAEALKE-----DGAEAIILGCAGM---SDL 188 (230)
T ss_pred cccHHHHHHHHHhcCccccccceeeCC-C-CcccccCChHHHHHHHHHHHHHHhhh-----cCCCEEEEcCccH---HHH
Confidence 344444556777788877655311110 0 11233444567888888888888776 4578899999653 356
Q ss_pred HHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHcC
Q 009598 237 SSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKAN 277 (531)
Q Consensus 237 a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~~ 277 (531)
+.+++..+|++ . +.| -..|+.+|-.|++.+
T Consensus 189 a~~Lq~~~gvP----V--IDg-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 189 ADQLQKAFGVP----V--IDG-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHhCCC----c--ccc-----hHHHHHHHHHHHhhc
Confidence 89999999965 1 333 456778888887765
No 255
>PRK08304 stage V sporulation protein AD; Validated
Probab=42.31 E-value=90 Score=32.98 Aligned_cols=86 Identities=20% Similarity=0.258 Sum_probs=53.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC-----CC--ceeEEe---------cCCCchHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLR-----DD--IKTYNL---------GGMGCSAGLI 265 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~-----~~--~~~fdl---------~g~gCsg~l~ 265 (531)
|+..+.+=|+++|.+|+|-|+||..-- ...--.+...+..+-|+. .| +.-||. +|.|||+.+.
T Consensus 210 a~dti~~h~~d~~~~~~~yDli~tGDl-g~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~ 288 (337)
T PRK08304 210 AADTIQQHFKDTGRSPEDYDLIVTGDL-GRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVT 288 (337)
T ss_pred HHHHHHHHHHHcCCChhhccEEEEcch-HHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHH
Confidence 556666778899999999999986521 111123334444444441 01 234552 2357888776
Q ss_pred HHHHHHHHHHcCCCCeEEEEEecc
Q 009598 266 SIELAKNLLKANPNSYAVVVSTEN 289 (531)
Q Consensus 266 AL~lA~~lL~~~~~~~aLVVstE~ 289 (531)
.=.+-+.+ +.+..+++|+|+|-.
T Consensus 289 ~~~~~~~~-~~g~~~rvl~v~tGa 311 (337)
T PRK08304 289 YGYLLKEL-QKGKLKRVLVVATGA 311 (337)
T ss_pred HHHHHHHH-hcCCceEEEEEEchh
Confidence 65555544 456789999999876
No 256
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=42.15 E-value=49 Score=35.83 Aligned_cols=45 Identities=16% Similarity=0.051 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN-CSLFNPVPSLSSMIVNHYKL 246 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 246 (531)
..++++++|+++|++|+|||.+-.. |++..-.+.-+..|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 5789999999999999999998644 55444445556677777774
No 257
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=40.90 E-value=53 Score=29.36 Aligned_cols=56 Identities=13% Similarity=0.153 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCC--CCCCcHHHHHHHHcCCCCCceeEEecCCCc
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLF--NPVPSLSSMIVNHYKLRDDIKTYNLGGMGC 260 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gC 260 (531)
..+-.++.+++.+++++||--++|..++| ...|+ ..++++|.-.+++-++...|.=
T Consensus 22 t~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~~~~~Vplmc~qE~~V 79 (117)
T cd02185 22 TRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFPA---KAARELGGWKYVPLMCAQEMDV 79 (117)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccChH---HHHHhcCCCCCcceeecCcCCC
Confidence 34455677789999999999999997764 44664 4556664434777777665433
No 258
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=39.88 E-value=27 Score=35.55 Aligned_cols=29 Identities=28% Similarity=0.454 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEe
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVN 226 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ 226 (531)
--+|...|++++++++|++|.||+++=..
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEee
Confidence 35778899999999999999999988644
No 259
>PLN03173 chalcone synthase; Provisional
Probab=39.80 E-value=89 Score=33.61 Aligned_cols=70 Identities=13% Similarity=0.172 Sum_probs=46.3
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee-----EE-ecCCCchHHHHHHHHH
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT-----YN-LGGMGCSAGLISIELA 270 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-----fd-l~g~gCsg~l~AL~lA 270 (531)
-+....-..++++|++.|++++|||..|+.-. .+.+-..++++||++++-.. +. .++|+.++.+.+|+-+
T Consensus 274 ~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqg----g~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (391)
T PLN03173 274 LISKNVEKSLTEAFKPLGISDWNSLFWIAHPG----GPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEM 349 (391)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEECCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 35566677888999999999999999775532 24566779999999865332 22 3334444444455444
No 260
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=39.23 E-value=25 Score=36.63 Aligned_cols=86 Identities=17% Similarity=0.247 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-------ceeEEe---------cCCCchHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDD-------IKTYNL---------GGMGCSAGLI 265 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~-------~~~fdl---------~g~gCsg~l~ 265 (531)
|+..+.+=|+++|.+|+|-|+||..-- ...--.+...+.++-|+.-. +.-||. +|.|||+.+.
T Consensus 205 A~dTI~~h~~D~g~~p~dYDlIvTGDL-g~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~ 283 (329)
T PF07451_consen 205 AADTIEQHFKDTGRSPDDYDLIVTGDL-GKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVVL 283 (329)
T ss_dssp HHHHHHHHHHHCT--GGG-SEEEESS--HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHHH
T ss_pred HHHHHHHHHHHhCCChhhcCeEEecch-HHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHHH
Confidence 455566778899999999999996521 01111344445555554310 112222 2457787776
Q ss_pred HHHHHHHHHHcCCCCeEEEEEecc
Q 009598 266 SIELAKNLLKANPNSYAVVVSTEN 289 (531)
Q Consensus 266 AL~lA~~lL~~~~~~~aLVVstE~ 289 (531)
.=.+-+. |+.+..+++|+|+|-.
T Consensus 284 ~g~ll~~-l~~g~~krvL~vaTGA 306 (329)
T PF07451_consen 284 CGYLLPK-LRKGELKRVLFVATGA 306 (329)
T ss_dssp HHCHHHH-HHTTS-SEEEEEEEEE
T ss_pred HHHHHHH-HHcCCceEEEEEEchh
Confidence 6555554 4567789999999876
No 261
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=39.18 E-value=66 Score=28.80 Aligned_cols=57 Identities=16% Similarity=0.226 Sum_probs=35.5
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC--CCCCcHHHHHHHHc-CCCCCceeEEecC
Q 009598 197 EADEVMFGALDSLFEKTGVEPSDVGILIVNCSLF--NPVPSLSSMIVNHY-KLRDDIKTYNLGG 257 (531)
Q Consensus 197 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~L-Gl~~~~~~fdl~g 257 (531)
+..+-..+-.++.+++.+++++||--++|.+++| ...|+.+. +++ |+. +++-+...-
T Consensus 17 ~I~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a~---R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 17 EILEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAAA---RELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHHH---HHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHHH---HccCCCC-ccceeccCc
Confidence 3444445556677889999999999999998765 55676544 344 775 666666553
No 262
>PLN03171 chalcone synthase-like protein; Provisional
Probab=38.67 E-value=96 Score=33.42 Aligned_cols=71 Identities=8% Similarity=0.071 Sum_probs=45.6
Q ss_pred hcHHHHHHHHHHHHHHh---------cCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee------EEecCCCc
Q 009598 196 VEADEVMFGALDSLFEK---------TGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT------YNLGGMGC 260 (531)
Q Consensus 196 ~ea~~la~~Aa~~aL~~---------agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~------fdl~g~gC 260 (531)
++...+..+++++++++ .|++++|||.+++ + ..+.+-..+.++||++++-.. -+.+++++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~H---q--~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVH---P--GSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEEc---C--CcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 44556666666777665 5888999987642 1 123566779999999754322 24555666
Q ss_pred hHHHHHHHHHH
Q 009598 261 SAGLISIELAK 271 (531)
Q Consensus 261 sg~l~AL~lA~ 271 (531)
++...+|+-+.
T Consensus 350 aSip~~L~~~~ 360 (399)
T PLN03171 350 ATVIFALDELR 360 (399)
T ss_pred hhHHHHHHHHH
Confidence 66667776543
No 263
>PLN03172 chalcone synthase family protein; Provisional
Probab=35.80 E-value=59 Score=35.02 Aligned_cols=69 Identities=13% Similarity=0.194 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCcee-----E-EecCCCchHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKT-----Y-NLGGMGCSAGLISIELA 270 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-----f-dl~g~gCsg~l~AL~lA 270 (531)
+.......++++|++.|++..|||..++.-. .+.+-..|+++||++++-.. + +.++|+.++.+.+|+-.
T Consensus 275 ~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqg----g~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 275 ISKNIEKSLVEAFAPIGINDWNSIFWIAHPG----GPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHhhhcCCCccccceEEecCC----cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 4555666778899999999999999775432 24566779999999854332 2 34445666666666644
No 264
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=35.51 E-value=78 Score=33.16 Aligned_cols=68 Identities=18% Similarity=0.294 Sum_probs=42.9
Q ss_pred HHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecC--------CCchHHHHHHHHHHHHHH
Q 009598 204 GALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG--------MGCSAGLISIELAKNLLK 275 (531)
Q Consensus 204 ~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g--------~gCsg~l~AL~lA~~lL~ 275 (531)
-|+.++|+++|+..+|||+.=.|-- .-|-+..-.++||+.+ .-.|.+| .||+|.=.-.-+-+.|=+
T Consensus 324 vAIp~alk~aGL~v~did~FEINEA----FAsQ~~yc~~KL~ld~--ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKr 397 (435)
T KOG1389|consen 324 VAIPKALKAAGLEVDDIDLFEINEA----FASQALYCRNKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEMKR 397 (435)
T ss_pred hhhHHHHHHcCCcccccceeehhHH----HHHHHHHHHHHhCCCH--HHcCCCCceeeccCCcCCccHhHHHHHHHHHHh
Confidence 4788999999999999998765521 1233455678999863 2333333 577776555544444444
Q ss_pred cC
Q 009598 276 AN 277 (531)
Q Consensus 276 ~~ 277 (531)
.+
T Consensus 398 rg 399 (435)
T KOG1389|consen 398 RG 399 (435)
T ss_pred hc
Confidence 43
No 265
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=33.62 E-value=2e+02 Score=28.70 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=42.6
Q ss_pred cccccEEEEc----CCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHhcCCCCCCCEEEEEEeC
Q 009598 418 KLAFEHFCIH----SGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFG 491 (531)
Q Consensus 418 ~~did~f~~H----q~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fG 491 (531)
.+||+|++.- ...+.+--.+.+.|||+++-- |.-+.-.|--++.+-+-.-.++.+. .||.+|++++.-
T Consensus 119 ~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~---~p~a~VLvv~vE 190 (226)
T PF00195_consen 119 PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA---NPGARVLVVCVE 190 (226)
T ss_dssp GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH---STT-EEEEEEEE
T ss_pred CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC---CccceEEEEEEE
Confidence 5899999952 234455558999999998654 6777777877776665333333332 589999998754
No 266
>PRK13410 molecular chaperone DnaK; Provisional
Probab=33.55 E-value=98 Score=35.82 Aligned_cols=67 Identities=10% Similarity=0.175 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIE 268 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~ 268 (531)
..+-....++++|+++|+++++||.|+..... ...|.+..+|.+.+|.. ...+++..-|.+.-.|+.
T Consensus 307 l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~---~~~~~npdeaVA~GAAi~ 373 (668)
T PRK13410 307 LLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPRE---PNQNVNPDEVVAVGAAIQ 373 (668)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCC---cccCCCCchHHHHhHHHH
Confidence 33445667889999999999999998866422 35799999999999854 234455444555444444
No 267
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=31.86 E-value=1e+02 Score=32.94 Aligned_cols=76 Identities=16% Similarity=0.294 Sum_probs=50.6
Q ss_pred hhhhhhcHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCC--------cHHHHHHHHcCCC--CCceeEEecCCCc
Q 009598 191 IHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVP--------SLSSMIVNHYKLR--DDIKTYNLGGMGC 260 (531)
Q Consensus 191 l~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P--------s~a~~I~~~LGl~--~~~~~fdl~g~gC 260 (531)
+.+...+..++-.+|++++++++|+++++||+|=....+-+..| .-.+.|+++.|++ .|-++-|+.-.|=
T Consensus 62 l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a~GGq 141 (365)
T PRK09585 62 LAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAAGGQ 141 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHhcCCC
Confidence 44455567778899999999999999999999876543333333 2367888999976 2344556653343
Q ss_pred hHHHHH
Q 009598 261 SAGLIS 266 (531)
Q Consensus 261 sg~l~A 266 (531)
.+-+..
T Consensus 142 GAPLvp 147 (365)
T PRK09585 142 GAPLVP 147 (365)
T ss_pred CCCchH
Confidence 444433
No 268
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=28.61 E-value=90 Score=38.43 Aligned_cols=123 Identities=20% Similarity=0.274 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcC----EEEEeec-CC-----CCCC----------cHHHHHHHHcCCC--CCceeEEe
Q 009598 198 ADEVMFGALDSLFEKTGVEPSDVG----ILIVNCS-LF-----NPVP----------SLSSMIVNHYKLR--DDIKTYNL 255 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~dID----~LI~~ss-~~-----~~~P----------s~a~~I~~~LGl~--~~~~~fdl 255 (531)
-..|..++.-+++-++||+|.+.- .+.+.|| +. ...| ..-+|.+||+-.. -.-++|.+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~ 166 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSV 166 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhh
Confidence 456788999999999999998764 2333332 11 1111 2246677765421 01346666
Q ss_pred cCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-C----C-----CC--CC----CccccccccccccceEEEEEe
Q 009598 256 GGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQ-N----W-----YS--GN----DRSMLLCNCLFRMGGAAVLLS 319 (531)
Q Consensus 256 ~g~gCsg~l~AL~lA~~lL~~~~~~~aLVVstE~~S~-~----~-----~~--~~----dr~~ll~~~lfgDGAaAvLLs 319 (531)
. .+|++.+.|++.|.+-++.+...+|+|-+.-.+-. + | .. |. |.+. ....=.||.+|++|.
T Consensus 167 D-tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeag--nGY~Rseg~~avllq 243 (2376)
T KOG1202|consen 167 D-TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAG--NGYCRSEGVVAVLLQ 243 (2376)
T ss_pred h-hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccC--CceeecCceEEEEEe
Confidence 6 69999999999999999999999999988776432 1 1 11 11 1110 112346899999998
Q ss_pred eCCC
Q 009598 320 NKAR 323 (531)
Q Consensus 320 ~~~~ 323 (531)
++..
T Consensus 244 rk~~ 247 (2376)
T KOG1202|consen 244 RKSL 247 (2376)
T ss_pred hhHH
Confidence 7654
No 269
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=28.36 E-value=3.6e+02 Score=28.22 Aligned_cols=106 Identities=11% Similarity=0.186 Sum_probs=61.8
Q ss_pred CCCCeEEEEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCCCcCCCCCcchhhhhhcHH
Q 009598 120 RSSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRGITSRPPNICIHEARVEAD 199 (531)
Q Consensus 120 r~~~v~Iv~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~~~~~~~~~~l~~~~~ea~ 199 (531)
....-||++.++| |. +=+.-+......... +|- .=|-++|....||..|++-.+...+ ..
T Consensus 209 HsgsdYiISrATF-P~--YFiKeq~vv~~s~t~--iDl--~iFr~~iA~aLgIThRfVG~EP~c~-------------vT 268 (352)
T COG3053 209 HSGSDYIISRATF-PA--YFIKEQSVVNDSQTE--IDL--KIFRKYIAPALGITHRFVGTEPFCR-------------VT 268 (352)
T ss_pred ecCCCeEEEeccc-ch--hhhhhHHHHHHHHHH--HHH--HHHHHHHHHHhCcceeeecCCCCcH-------------HH
Confidence 4556799998888 77 444444443333210 111 1255568888999998775432211 12
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcC
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYK 245 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LG 245 (531)
..=-+..++-|++++++.--|++++.--....-.|=.|+.|-..+.
T Consensus 269 ~~YNq~M~~~L~~~~~~~p~I~vvei~Rk~~~~~~ISAS~VR~~l~ 314 (352)
T COG3053 269 AIYNQQMRYWLEDPTISAPPIEVVEIERKKYQEMPISASRVRQLLA 314 (352)
T ss_pred HHHHHHHHHHHhccCCCCCceEEEEeehhhhcCCcccHHHHHHHHH
Confidence 2234456778888888888899988774333344544555544443
No 270
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=27.33 E-value=1.3e+02 Score=32.44 Aligned_cols=25 Identities=12% Similarity=0.372 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVN 226 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ 226 (531)
..++++++|+++|++|+|||.+...
T Consensus 283 ~~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 283 EMRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcc
Confidence 3589999999999999999988644
No 271
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=27.15 E-value=58 Score=32.07 Aligned_cols=38 Identities=32% Similarity=0.340 Sum_probs=29.0
Q ss_pred ccccccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHhhh
Q 009598 458 FGNTSSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFKCN 497 (531)
Q Consensus 458 ~GNtsSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~~~ 497 (531)
+|-|-|. |...+.+.+.=.+++||+|+=||-|+||..+
T Consensus 51 ~gqtis~--P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aA 88 (209)
T COG2518 51 CGQTISA--PHMVARMLQLLELKPGDRVLEIGTGSGYQAA 88 (209)
T ss_pred CCceecC--cHHHHHHHHHhCCCCCCeEEEECCCchHHHH
Confidence 5555444 5566777776678999999999999998643
No 272
>CHL00094 dnaK heat shock protein 70
Probab=27.14 E-value=1.4e+02 Score=34.21 Aligned_cols=45 Identities=7% Similarity=0.212 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLR 247 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~ 247 (531)
....++++|+++|+++++||.|+..... ...|.+..++.+.+|..
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 311 CRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 4456789999999999999999866422 45799999999999854
No 273
>PLN03184 chloroplast Hsp70; Provisional
Probab=26.90 E-value=1.5e+02 Score=34.41 Aligned_cols=63 Identities=6% Similarity=0.065 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIE 268 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~ 268 (531)
....++++|++++++++|||.|+..... ..+|.+-.+|.+.+|... ...++..-|.+.-.|+.
T Consensus 348 ~~~~i~~~L~~a~~~~~dId~ViLvGGs-sriP~V~~~i~~~fg~~~---~~~~npdeaVA~GAAi~ 410 (673)
T PLN03184 348 CKTPVENALRDAKLSFKDIDEVILVGGS-TRIPAVQELVKKLTGKDP---NVTVNPDEVVALGAAVQ 410 (673)
T ss_pred HHHHHHHHHHHcCCChhHccEEEEECCc-cccHHHHHHHHHHhCCCc---ccccCcchHHHHHHHHH
Confidence 4566788999999999999999876321 347999999999998642 34455445554444444
No 274
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=26.21 E-value=1.8e+02 Score=27.62 Aligned_cols=81 Identities=16% Similarity=0.138 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhc--CCCCCCcCEEEE-eecCCCCCC--cHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHHHHc
Q 009598 202 MFGALDSLFEKT--GVEPSDVGILIV-NCSLFNPVP--SLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKA 276 (531)
Q Consensus 202 a~~Aa~~aL~~a--gi~p~dID~LI~-~ss~~~~~P--s~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~lL~~ 276 (531)
+..++++.+++- .-.-+.|+++++ +.+.....| +-...+...+. .. .. . .|-.+.-.||..|.++++.
T Consensus 29 ak~~~~~fi~~~~~~~~~~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~---~~--~~-~-~G~t~l~~aL~~A~~~l~~ 101 (183)
T cd01453 29 VLKLLELFIEEFFDQNPISQLGIISIKNGRAEKLTDLTGNPRKHIQALK---TA--RE-C-SGEPSLQNGLEMALESLKH 101 (183)
T ss_pred HHHHHHHHHHHHhhcCccccEEEEEEcCCccEEEECCCCCHHHHHHHhh---cc--cC-C-CCchhHHHHHHHHHHHHhc
Confidence 444555555431 223356999999 555544344 22223444443 12 11 2 2557888999999999975
Q ss_pred CC---CCeEEEEEecc
Q 009598 277 NP---NSYAVVVSTEN 289 (531)
Q Consensus 277 ~~---~~~aLVVstE~ 289 (531)
.+ .++++|+.++.
T Consensus 102 ~~~~~~~~iiil~sd~ 117 (183)
T cd01453 102 MPSHGSREVLIIFSSL 117 (183)
T ss_pred CCccCceEEEEEEcCC
Confidence 32 45688887763
No 275
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=26.18 E-value=1.5e+02 Score=33.89 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHH
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIE 268 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~ 268 (531)
+=....++++|+++|++++|||.|+..... ...|.+..+|.+.+|..+ . .+++..-|.+.-.|+.
T Consensus 309 ~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~~-~--~~~npdeaVA~GAAi~ 373 (616)
T PRK05183 309 KRTLLACRRALRDAGVEADEVKEVVMVGGS-TRVPLVREAVGEFFGRTP-L--TSIDPDKVVAIGAAIQ 373 (616)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEECCc-ccChHHHHHHHHHhccCc-C--cCCCchHHHHHHHHHH
Confidence 335566789999999999999999876321 357889999999998652 2 2455434444444443
No 276
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.73 E-value=72 Score=34.04 Aligned_cols=46 Identities=13% Similarity=0.096 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEE-EeecCCCCCCcHHHHHHHHcCC
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILI-VNCSLFNPVPSLSSMIVNHYKL 246 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI-~~ss~~~~~Ps~a~~I~~~LGl 246 (531)
=+..|.+++|+++|+.|+|||-|= ++||+..-.-.-+..|.+-|+-
T Consensus 302 Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 302 GAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred hHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 367889999999999999999885 4566432222223445555553
No 277
>PF09936 Methyltrn_RNA_4: SAM-dependent RNA methyltransferase; InterPro: IPR019230 This entry contains proteins that have no known function. They are found as separate proteins and as a C-terminal domain to tRNA (guanine-N(1)-)-methyltransferases to which they are structurally related. ; PDB: 3DCM_X.
Probab=25.63 E-value=2.1e+02 Score=27.61 Aligned_cols=92 Identities=22% Similarity=0.290 Sum_probs=49.7
Q ss_pred ccchhhhhHHHHHHHHHHHHHhhc----cCccccccccccEEEEcCCCHHHHHHHHHHcCCCcccccccccccccccccc
Q 009598 387 VLPWIEQFRFFVTLVRRKMFKAKV----KPYIPDFKLAFEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTS 462 (531)
Q Consensus 387 vlp~se~~~~~~~~~~~~v~~~~~----~~~~p~~~~did~f~~Hq~g~~vi~~v~~~Lgl~~e~~e~S~~~l~r~GNts 462 (531)
|-|+.+|.. +.+++++... ..|-|+-+++++.+.+...=..+++.+++.-|-.|.-+ ...-+++-|+-
T Consensus 48 VtPl~~Q~~-----l~~ril~hW~~G~G~~yNp~R~eAl~~v~~~~sle~a~~~I~~~~G~~P~~v---~TsAr~~~~~i 119 (185)
T PF09936_consen 48 VTPLEAQRE-----LAERILGHWQEGYGAEYNPDRKEALSLVRVVDSLEEAIEDIEEEEGKRPLLV---ATSARKYPNTI 119 (185)
T ss_dssp E---HHHHH-----HHHHHHHHHHTSGGGGT-SSSHHHHTTEEEESSHHHHHHHHHHHHSS--EEE---E--SS--SS-B
T ss_pred ecchHHHHH-----HHHHHHHhcccCCCcCcCcCHHHHHhHhccHhhHHHHHHHHHHHhCCCCEEE---EecCcCCCCCc
Confidence 346666632 2344554432 23667778899999999999999999999999999877 23444577775
Q ss_pred cchHHHHHHHHHhcCCCCCCCEEEEEEeChhH
Q 009598 463 SSSLWYELAYTEGKGRVARGDRVWQIAFGSGF 494 (531)
Q Consensus 463 SaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~ 494 (531)
| +-.|...+++ .|+-.++-||.|+
T Consensus 120 s---~~~lr~~l~~-----~~~P~LllFGTGw 143 (185)
T PF09936_consen 120 S---YAELRRMLEE-----EDRPVLLLFGTGW 143 (185)
T ss_dssp ----HHHHHHHHHH-------S-EEEEE--TT
T ss_pred C---HHHHHHHHhc-----cCCeEEEEecCCC
Confidence 5 3446655532 2344444555553
No 278
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=25.24 E-value=1.6e+02 Score=33.65 Aligned_cols=64 Identities=11% Similarity=0.153 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHH
Q 009598 201 VMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIE 268 (531)
Q Consensus 201 la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~ 268 (531)
=....++++|+++|+++++||.|+..... ...|.+..+|.+.+|... ..+++..-|.+.-.|+.
T Consensus 308 ~~~~~i~~~l~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~fg~~~---~~~~npdeava~GAa~~ 371 (627)
T PRK00290 308 RTIEPCKQALKDAGLSVSDIDEVILVGGS-TRMPAVQELVKEFFGKEP---NKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEECCc-CCChHHHHHHHHHhCCCC---CcCcCChHHHHHhHHHH
Confidence 35667789999999999999998866322 347999999999998642 23444445555444544
No 279
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=25.12 E-value=74 Score=32.44 Aligned_cols=49 Identities=22% Similarity=0.399 Sum_probs=36.5
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecC
Q 009598 203 FGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGG 257 (531)
Q Consensus 203 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g 257 (531)
+.|++.+|+++|++.+|||++=+|-- ..|. .-.+++.|+++ +.-.|++|
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEA---FApQ-~LAv~r~L~ld--~sKlNVNG 344 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEA---FAPQ-YLAVERSLDLD--ISKLNVNG 344 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechh---hchH-HHHHHHhhCCC--hhhccccC
Confidence 56899999999999999999988742 1121 23477888884 67778886
No 280
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=24.96 E-value=1.3e+02 Score=34.00 Aligned_cols=65 Identities=12% Similarity=0.188 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHH
Q 009598 200 EVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIE 268 (531)
Q Consensus 200 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~ 268 (531)
+=....++++|+++|+++++||.|++..+. ...|.+...|.+.+|.. ...+++..-|.+.-.|+.
T Consensus 305 ~~~~~~i~~~l~~a~~~~~~i~~V~LvGGs-sriP~v~~~i~~~f~~~---~~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 305 ERTKEPVRQALKDAGLSASDIDEVILVGGS-TRIPAVQELVKDFFGKE---PNKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHHcCCCHhHCcEEEEECCc-ccChHHHHHHHHHhCCc---ccCCcCcHHHHHHHHHHH
Confidence 335667789999999999999999876322 34799999999999843 223444444554444444
No 281
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=24.84 E-value=2.7e+02 Score=31.67 Aligned_cols=45 Identities=4% Similarity=0.158 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLR 247 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~ 247 (531)
....++++|+++|++++|||.|+.... ....|.+..+|.+.+|..
T Consensus 295 i~~~i~~~L~~a~~~~~~id~ViLvGG-ssriP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 295 TLSICRRALRDAGLSVEEIKGVVLVGG-STRMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECC-cCCChHHHHHHHHHhCCC
Confidence 567788999999999999999986532 235799999999999864
No 282
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=24.17 E-value=2e+02 Score=33.19 Aligned_cols=63 Identities=8% Similarity=0.109 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIE 268 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~ 268 (531)
....++++|+++|++++|||-||.... ...+|.+-.+|.+.+|..+ . .+++-.-|.+.-.|+.
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGG-ssriP~V~~~l~~~fg~~~-~--~~~nPdeaVA~GAAi~ 398 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGG-MTRMPKVVEEVKKFFQKDP-F--RGVNPDEAVALGAATL 398 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECC-cccChHHHHHHHHHhCCCc-c--ccCCCchHHHHhHHHH
Confidence 456678899999999999999886632 1357999999999998642 2 3455445555444444
No 283
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=22.95 E-value=3.3e+02 Score=28.45 Aligned_cols=113 Identities=12% Similarity=0.125 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCC-cCEEEEee-cCCCC--CCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHHHHHHH
Q 009598 198 ADEVMFGALDSLFEKTGVEPSD-VGILIVNC-SLFNP--VPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIELAKNL 273 (531)
Q Consensus 198 a~~la~~Aa~~aL~~agi~p~d-ID~LI~~s-s~~~~--~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~lA~~l 273 (531)
+.+=..++++++++++|+++++ +-.|.+.- ..+.. .--+-..+-+++. ..+..|-++. +....+
T Consensus 45 ~~~rie~~i~~A~~k~g~d~~~~lr~lgL~lSg~d~e~~~~~lv~~~R~~fp--s~ae~~~v~s----------Da~~sl 112 (336)
T KOG1794|consen 45 CASRIEDMIREAKEKAGWDKKGPLRSLGLGLSGTDQEDKNRKLVTEFRDKFP--SVAENFYVTS----------DADGSL 112 (336)
T ss_pred HHHHHHHHHHHHHhhcCCCccCccceeeeecccCCchhHHHHHHHHHHHhcc--chhheeeeeh----------hHHHHH
Confidence 4455667889999999999999 88887763 33332 1223344444443 2456677775 333333
Q ss_pred HHcC---CCCeEEEEEeccCCCCCC-CCCCccccccccccccceEEEEEeeCC
Q 009598 274 LKAN---PNSYAVVVSTENITQNWY-SGNDRSMLLCNCLFRMGGAAVLLSNKA 322 (531)
Q Consensus 274 L~~~---~~~~aLVVstE~~S~~~~-~~~dr~~ll~~~lfgDGAaAvLLs~~~ 322 (531)
...- .+..||+-++....+-.. +|+.+.-=......|||++|.-++...
T Consensus 113 ~a~t~g~~~GiVLiaGTgs~crl~~~DGs~~~~ggwg~~iGd~GSaywia~~A 165 (336)
T KOG1794|consen 113 AAATPGGEGGIVLIAGTGSNCRLVNPDGSEKGAGGWGHMIGDGGSAYWIARQA 165 (336)
T ss_pred hhcCCCCCCcEEEEecCCceeEEECCCCCccCCCCCCCccCCCcchhhhhhhh
Confidence 3332 357899988887665222 232221001234679999998776543
No 284
>PRK08329 threonine synthase; Validated
Probab=22.15 E-value=83 Score=33.14 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=29.3
Q ss_pred ccchHHHHHHHHHhcCCCCCCCEEEEEEeChhHh
Q 009598 462 SSSSLWYELAYTEGKGRVARGDRVWQIAFGSGFK 495 (531)
Q Consensus 462 sSaSi~~~La~~~~~gri~~GD~Vl~i~fGsG~~ 495 (531)
+|+..+..+..+.++|.+++|++|+++--|.|+|
T Consensus 312 ssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 312 TSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred cHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 3666777888888899999999999999999986
No 285
>PRK13411 molecular chaperone DnaK; Provisional
Probab=21.14 E-value=1.9e+02 Score=33.34 Aligned_cols=44 Identities=14% Similarity=0.354 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCC
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKL 246 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl 246 (531)
....++++|+++++++++||.|+.... ....|.+-.+|.+.+|-
T Consensus 310 ~~~~i~~~L~~a~~~~~~id~ViLvGG-ssriP~v~~~l~~~f~~ 353 (653)
T PRK13411 310 TIEPMQQALKDAGLKPEDIDRVILVGG-STRIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECC-CCCcchHHHHHHHHcCC
Confidence 566788999999999999998886632 23579999999999974
No 286
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=20.55 E-value=1.9e+02 Score=23.14 Aligned_cols=36 Identities=19% Similarity=0.151 Sum_probs=22.9
Q ss_pred ceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCC
Q 009598 138 RKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVG 173 (531)
Q Consensus 138 ~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~ 173 (531)
.+|.-+.+.+.+.....-++++++...+++++.|+.
T Consensus 11 ~~V~g~~ie~~~~~~~~~~~e~~~rf~~~L~~~Gv~ 46 (69)
T PF09269_consen 11 FVVEGPKIERLVAMTNFDDEESLRRFQRKLKKMGVE 46 (69)
T ss_dssp EEEE-HHHHHHHTTEEE-TGGGHHHHHHHHHHTTHH
T ss_pred EEEEChHHHHHHHhcCCCCHHHHHHHHHHHHHCCHH
Confidence 567767777766654434677777777888888743
No 287
>PF08745 UPF0278: UPF0278 family; InterPro: IPR022785 This entry contains proteins of the UPF0278 family and proteins containing PIN domains. Members of the UPF0278 family are uncharacterised and about 200 amino acids in length.; PDB: 2LCQ_A.
Probab=20.53 E-value=33 Score=33.47 Aligned_cols=51 Identities=14% Similarity=0.238 Sum_probs=0.0
Q ss_pred EEEeEecCCCCceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCCeEEeecCC
Q 009598 127 VDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSRG 181 (531)
Q Consensus 127 v~~~~y~P~~~~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~er~~~~~~ 181 (531)
.+++||.|| --.+|+......++.-.+-..+|..|+..++==.-+...|..
T Consensus 41 l~is~YmPp----SVy~El~~fl~~~~~~~e~~~k~~twvv~KsP~ryev~IPA~ 91 (205)
T PF08745_consen 41 LGISCYMPP----SVYKELKNFLERNGCDEEVISKLDTWVVKKSPDRYEVKIPAE 91 (205)
T ss_dssp -------------------------------------------------------
T ss_pred ccccccccc----cccccccccccccccccccccccccccccccccccccccccc
Confidence 467899998 234556555554443222234555677666643333334443
No 288
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=20.45 E-value=2.1e+02 Score=32.96 Aligned_cols=64 Identities=9% Similarity=0.232 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceeEEecCCCchHHHHHHH
Q 009598 202 MFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMIVNHYKLRDDIKTYNLGGMGCSAGLISIE 268 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~fdl~g~gCsg~l~AL~ 268 (531)
....++++|+++++++++||.|+.... ....|.+-.+|.+.+|-.. ...+++..-|.+.-.|+.
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~ 378 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGG-STRIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQ 378 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECC-CCCChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhh
Confidence 445688999999999999999886632 2357999999999997431 233444444554444444
No 289
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=20.39 E-value=3.1e+02 Score=21.94 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=22.2
Q ss_pred ceecHHHHHHHhhccCCCCHHhHHHHHHHHHHcCCC
Q 009598 138 RKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVG 173 (531)
Q Consensus 138 ~~vs~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~ 173 (531)
++|+-..+...+.....-+++++....+++++.|+.
T Consensus 11 ~~V~g~~ier~~~~~~~~~~e~~~~f~~~L~~~Gv~ 46 (69)
T TIGR03595 11 FVVSGKKIERWVAKTPFNNDENLRRFARKLKKLGVE 46 (69)
T ss_pred EEEechHHHHHHHHcCCCCHHHHHHHHHHHHHCCHH
Confidence 445555565555544333567777777888888843
No 290
>PLN02854 3-ketoacyl-CoA synthase
Probab=20.33 E-value=3.7e+02 Score=30.24 Aligned_cols=42 Identities=10% Similarity=0.139 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhcCCCC------CCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 009598 202 MFGALDSLFEKTGVEP------SDVGILIVNCSLFNPVPSLSSMIVNHYKLR 247 (531)
Q Consensus 202 a~~Aa~~aL~~agi~p------~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~ 247 (531)
+...+++.|+++|+++ +|||..+.... ....-..++++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqg----gr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAG----GRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECCC----CHHHHHHHHHHcCCC
Confidence 5678899999999997 68998875532 234556799999996
Done!