Query 009601
Match_columns 531
No_of_seqs 172 out of 1714
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 15:05:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009601.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009601hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03167 Chaperonin-60 beta su 100.0 7E-107 2E-111 892.8 49.4 524 1-531 1-524 (600)
2 PRK12849 groEL chaperonin GroE 100.0 2E-101 4E-106 844.4 52.2 465 62-530 1-466 (542)
3 PRK12852 groEL chaperonin GroE 100.0 6E-101 1E-105 842.3 51.4 466 61-530 1-467 (545)
4 PRK00013 groEL chaperonin GroE 100.0 9E-101 2E-105 838.8 50.9 465 62-530 1-466 (542)
5 TIGR02348 GroEL chaperonin Gro 100.0 1E-100 3E-105 836.6 51.1 463 64-530 2-465 (524)
6 PRK12850 groEL chaperonin GroE 100.0 2E-100 4E-105 837.7 50.5 466 61-530 1-467 (544)
7 PTZ00114 Heat shock protein 60 100.0 2E-100 5E-105 839.1 50.9 465 63-530 14-482 (555)
8 cd03344 GroEL GroEL_like type 100.0 1E-99 2E-104 828.3 51.5 463 64-530 1-464 (520)
9 PRK12851 groEL chaperonin GroE 100.0 9E-100 2E-104 831.6 50.5 465 62-530 2-467 (541)
10 CHL00093 groEL chaperonin GroE 100.0 8E-100 2E-104 830.9 50.1 465 62-530 1-468 (529)
11 PRK14104 chaperonin GroEL; Pro 100.0 6E-99 1E-103 825.1 50.3 464 63-530 3-467 (546)
12 KOG0356 Mitochondrial chaperon 100.0 9.4E-94 2E-98 745.2 37.5 467 62-531 15-483 (550)
13 TIGR02339 thermosome_arch ther 100.0 9.8E-81 2.1E-85 681.3 42.1 399 66-530 11-459 (519)
14 cd03343 cpn60 cpn60 chaperonin 100.0 2.1E-80 4.6E-85 678.8 42.2 400 65-530 9-456 (517)
15 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 8.2E-81 1.8E-85 675.7 37.5 389 72-530 11-422 (484)
16 cd03335 TCP1_alpha TCP-1 (CTT 100.0 3.1E-80 6.8E-85 678.2 42.0 400 72-530 7-457 (527)
17 TIGR02347 chap_CCT_zeta T-comp 100.0 7.2E-80 1.6E-84 674.1 43.2 395 72-530 15-465 (531)
18 cd03339 TCP1_epsilon TCP-1 (CT 100.0 1.2E-79 2.5E-84 673.5 42.0 400 65-530 17-466 (526)
19 TIGR02340 chap_CCT_alpha T-com 100.0 1.2E-79 2.6E-84 674.5 41.8 400 72-530 11-461 (536)
20 COG0459 GroL Chaperonin GroEL 100.0 2.7E-81 5.9E-86 678.2 27.8 438 62-530 2-454 (524)
21 cd03338 TCP1_delta TCP-1 (CTT 100.0 1.8E-79 3.9E-84 671.0 41.0 402 72-530 7-455 (515)
22 TIGR02343 chap_CCT_epsi T-comp 100.0 4.7E-79 1E-83 668.6 42.4 395 72-530 26-470 (532)
23 cd03340 TCP1_eta TCP-1 (CTT or 100.0 1.2E-78 2.5E-83 665.4 42.9 398 72-530 15-458 (522)
24 TIGR02344 chap_CCT_gamma T-com 100.0 8.2E-79 1.8E-83 667.0 40.7 395 72-530 15-460 (525)
25 TIGR02342 chap_CCT_delta T-com 100.0 1.3E-78 2.9E-83 663.6 41.3 402 72-530 8-456 (517)
26 cd03336 TCP1_beta TCP-1 (CTT o 100.0 6.2E-78 1.3E-82 658.4 43.7 394 72-530 12-453 (517)
27 TIGR02345 chap_CCT_eta T-compl 100.0 2.4E-78 5.3E-83 662.3 40.0 397 72-530 17-459 (522)
28 PTZ00212 T-complex protein 1 s 100.0 9.9E-78 2.2E-82 658.6 42.9 394 72-530 21-465 (533)
29 cd03337 TCP1_gamma TCP-1 (CTT 100.0 1.3E-77 2.8E-82 650.4 38.1 378 72-530 15-419 (480)
30 TIGR02346 chap_CCT_theta T-com 100.0 1.3E-77 2.8E-82 657.1 37.7 394 72-530 17-457 (531)
31 TIGR02341 chap_CCT_beta T-comp 100.0 3.2E-76 6.9E-81 644.5 44.0 394 72-530 13-454 (519)
32 cd03341 TCP1_theta TCP-1 (CTT 100.0 3E-76 6.4E-81 638.5 39.5 381 71-530 6-409 (472)
33 cd00309 chaperonin_type_I_II c 100.0 6.1E-76 1.3E-80 636.0 41.5 382 66-530 3-405 (464)
34 KOG0361 Chaperonin complex com 100.0 3.1E-74 6.7E-79 574.0 27.3 399 72-531 19-463 (543)
35 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 1.4E-69 3E-74 588.6 36.7 382 85-530 1-424 (485)
36 KOG0358 Chaperonin complex com 100.0 3E-70 6.5E-75 544.6 25.7 400 72-529 25-472 (534)
37 KOG0363 Chaperonin complex com 100.0 1.5E-68 3.2E-73 530.3 28.2 394 72-530 17-458 (527)
38 KOG0362 Chaperonin complex com 100.0 1.9E-65 4.1E-70 526.0 33.3 394 71-530 24-460 (537)
39 KOG0360 Chaperonin complex com 100.0 4.3E-64 9.4E-69 512.8 25.5 400 72-531 18-468 (545)
40 KOG0364 Chaperonin complex com 100.0 8.7E-60 1.9E-64 477.2 19.3 390 76-529 22-459 (527)
41 KOG0359 Chaperonin complex com 100.0 5E-56 1.1E-60 449.3 17.3 392 74-529 18-455 (520)
42 KOG0357 Chaperonin complex com 100.0 3.2E-54 6.9E-59 424.9 17.6 314 58-530 15-334 (400)
43 cd03333 chaperonin_like chaper 100.0 3.5E-28 7.5E-33 236.4 20.3 191 204-470 3-209 (209)
44 cd03334 Fab1_TCP TCP-1 like do 99.9 1.3E-26 2.8E-31 232.7 20.6 199 215-471 19-254 (261)
45 KOG0230 Phosphatidylinositol-4 99.2 2.2E-10 4.8E-15 132.4 14.4 208 215-481 333-578 (1598)
46 COG0459 GroL Chaperonin GroEL 97.4 0.00029 6.3E-09 77.7 6.5 88 294-397 259-353 (524)
47 smart00574 POX domain associat 56.8 78 0.0017 28.9 8.5 60 419-491 68-128 (140)
48 TIGR02345 chap_CCT_eta T-compl 50.8 5 0.00011 44.7 -0.1 61 304-365 246-315 (522)
49 PF07526 POX: Associated with 43.1 1.4E+02 0.0031 27.2 8.2 58 421-491 70-128 (140)
50 PRK13600 putative ribosomal pr 34.7 1.9E+02 0.0041 24.1 6.9 55 296-360 20-74 (84)
51 COG1433 Uncharacterized conser 31.4 1.4E+02 0.003 26.6 6.0 38 297-341 57-94 (121)
52 KOG1593 Asparaginase [Amino ac 22.7 1.3E+02 0.0028 30.6 4.5 57 454-522 105-164 (349)
53 COG4555 NatA ABC-type Na+ tran 22.4 1.4E+02 0.003 29.5 4.6 38 275-312 148-190 (245)
54 TIGR01166 cbiO cobalt transpor 20.1 99 0.0021 29.0 3.1 41 276-316 143-188 (190)
No 1
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=7.3e-107 Score=892.79 Aligned_cols=524 Identities=91% Similarity=1.231 Sum_probs=497.8
Q ss_pred CcccccccccccccccCCCcccchhcccccccccccccccccccccccchhcccccccccccccccccCCcHHHHHHHHH
Q 009601 1 MASTFTAMSSISSMIAPNGRMTDKKLASSSNKLSSLASISSSSFGRRQSVALRRARTPKIYAAKDLHFNKDGYAMKKLQN 80 (531)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~a~~~~~~ 80 (531)
|||++.+.++.++..++... ++.+.++|+..++..+|+++++.+.|++..++..|+|++.||.+.++|+.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ar~~l~~ 73 (600)
T PLN03167 1 MASTFTATSSVGSLAAPNGH-------KSDNRLSSFASISSSSFGRRQSVRLRRSRSPKVKAAKELHFNKDGSAIKKLQA 73 (600)
T ss_pred CcchhhhhhhhcCccccccc-------ccccccccccccccccccccccccccccCCchhhhcceeecCCcHHHHHHHHH
Confidence 88998888888888877544 55678888999999999766666666666677777999999932289999999
Q ss_pred HHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCccchHHHHHHH
Q 009601 81 GVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG 160 (531)
Q Consensus 81 ~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGTTtvvvLa~~ 160 (531)
|++.|+++|+|||||+||||||++++|+|+|||||+||+|+|+++||++|+||+|++++|++||+++||||||++||+++
T Consensus 74 g~~~la~~vktTLGP~G~~kmi~~~~G~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~evGDGTTTvvVLa~~ 153 (600)
T PLN03167 74 GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG 153 (600)
T ss_pred HHHHHHHHHhccCCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCchhhHHHHHHHHHHHhhhhhhCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCchhhHHhhhhccCChhhHhHHHHHHHHhhccCCceEeec
Q 009601 161 LIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE 240 (531)
Q Consensus 161 LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~~l~~va~ts~~~~~~l~~li~~A~~~v~~~g~I~v~~ 240 (531)
||+++.+++++|+||..|++||++|.+.+++.|+++++++++.+|.++|++|+++++.|++|+++|+.+++++|.|.+++
T Consensus 154 LL~ea~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~s~~v~d~~L~~vA~tS~~~~~~i~~liaeAv~~Vg~~g~i~v~~ 233 (600)
T PLN03167 154 LIAEGVKVVAAGANPVQITRGIEKTAKALVKELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE 233 (600)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHhccCcHHHHHHHHHHHHHhccCCcEEecc
Confidence 99999999999999999999999999999999999999997558999999999999999999999999999999999999
Q ss_pred CCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHHHHhcCCCEEEEeccchHHHH
Q 009601 241 GKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEAL 320 (531)
Q Consensus 241 G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~i~~~g~~lvI~~~~I~~~al 320 (531)
|++++|++++++|++|+++|.+|||++++++|+++++||+|+++|++|++++++.++++.+.+.|+|+||++++|++++|
T Consensus 234 g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~~l~np~Ill~d~~i~~~~~l~~~le~i~~~g~~lvI~a~~I~~~aL 313 (600)
T PLN03167 234 GKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKITNARDLIGILEDAIRGGYPLLIIAEDIEQEAL 313 (600)
T ss_pred CCCccceeEEEEEEEecCCccCcccccCcCCCeEEEeCCEEEEEccccCCHHHHHHHHHHHHHhCcCEEEEcCCCCHHHH
Confidence 99999998999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEeCceEEEEcCCCCh
Q 009601 321 ATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQ 400 (531)
Q Consensus 321 ~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~~~g~~~~ 400 (531)
++|+.|+++|..+|+|||+|+||+.++++|+|||++|||++++++.+++++++++++||+|++|++.+++|+++++.+++
T Consensus 314 ~~L~~nkl~g~~~i~aVk~p~~g~~~~~~L~dia~~tGa~~i~~~~~~~l~~~~~~~LG~a~~v~~~~~~t~iig~~~~~ 393 (600)
T PLN03167 314 ATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKVGKEVLGTAAKVVLTKDTTTIVGDGSTQ 393 (600)
T ss_pred HHHHHhhccccceEEEEEcccCCcchHHHHHHHHHhhCCEEecccccCCcccCCHHHCceeeEEEEecccceeeCCCccH
Confidence 99999999999999999999999999999999999999999999888889999999999999999999999999998999
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcCeeccCchhH
Q 009601 401 DAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL 480 (531)
Q Consensus 401 ~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~gvVpGGGa~e 480 (531)
+.+++|+.+++.+++++.++|++++|++|+++|++++++|+|||+|+.+++|+||+++||++++|+++++|+|||||++|
T Consensus 394 ~~i~~r~~~i~~~~~~~~~~~~~~~l~~Ri~~l~g~~aiI~vgG~t~~~l~E~er~i~DAl~avk~ai~~gvVpGGGa~e 473 (600)
T PLN03167 394 EAVNKRVAQIKNLIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL 473 (600)
T ss_pred HHHHHHHHHHHhhhhccCCHHHHHHHHHHHhhcCCcEEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 009601 481 LRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEK 531 (531)
Q Consensus 481 l~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~k 531 (531)
|+++.+|++++...++.+|..++++|++||+.||++||+|||+|+.+|+.+
T Consensus 474 l~ls~~L~~~~~~~~~~eq~~g~~~~~~Al~~p~r~La~NAG~d~~~vv~~ 524 (600)
T PLN03167 474 LRLASKVDAIKDTLENDEQKVGADIVKRALSYPLKLIAKNAGVNGSVVSEK 524 (600)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHhcchhhhhhcCCCCHHHHHHH
Confidence 999999999987888999988899999999999999999999999998753
No 2
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.7e-101 Score=844.39 Aligned_cols=465 Identities=59% Similarity=0.897 Sum_probs=451.8
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 62 ~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
|+|.|.|| ++++..|++|+..|+++|+|||||+||+|||+++.|+++|||||+||+++|+++||.+|+||+|++++|+
T Consensus 1 ~~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDGaTIlk~i~~~hp~~~~~a~ll~~~a~ 78 (542)
T PRK12849 1 MAKIIKFD--EEARRALERGVNKLADAVKVTLGPKGRNVVIDKSFGAPTITKDGVSIAKEIELEDPFENLGAQLVKEVAS 78 (542)
T ss_pred CCccccch--HHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCccHhHHHHHHHHHHH
Confidence 47899999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHh
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 220 (531)
+||+++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++++++. +|.++|+||++++++++
T Consensus 79 ~qd~e~GDGTTtvviLageLL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~ 158 (542)
T PRK12849 79 KTNDVAGDGTTTATVLAQALVQEGLKNVAAGANPMDLKRGIDKAVEAVVEELKALARPVSGSEEIAQVATISANGDEEIG 158 (542)
T ss_pred hcCCccCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999866 89999999999999999
Q ss_pred HHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHH
Q 009601 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (531)
Q Consensus 221 ~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (531)
+++++|+..++++|.+.++.|++++|++++++|++|+++|.+|||.++.++|++.++||+|+++|++|++++++.+++++
T Consensus 159 ~lv~~Av~~v~~~g~i~i~~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~~~~~l~~ 238 (542)
T PRK12849 159 ELIAEAMEKVGKDGVITVEESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEAVLEDPLILLTDKKISSLQDLLPLLEK 238 (542)
T ss_pred HHHHHHHHHhccCCcEeEEeCCCcceeEEEEEeEEEecCcccCcccccccCceEEeeCcEEEeecCCcCCHHHHHHHHHH
Confidence 99999999999888888889999998669999999999999999999988999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCce
Q 009601 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (531)
Q Consensus 301 i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (531)
+.+.|+||||++++|+++++++|..|+++|.++|+|||.|+|+++++++|+|||.+|||++++++.+++++++++++||+
T Consensus 239 i~~~~~~lvI~~~~I~~~al~~l~~~~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tGa~~v~~~~~~~~~~~~~~~LG~ 318 (542)
T PRK12849 239 VAQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGLKLEEVTLDDLGR 318 (542)
T ss_pred HHHhCCCEEEECCCCcHHHHHHHHHhhhhccccEEEEeCCCccchhHhHHHHHHHHhCCEEecccccCCcccCCHHHCce
Confidence 99999999999999999999999999999999999999999999999999999999999999988888899999999999
Q ss_pred eeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009601 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (531)
Q Consensus 381 ~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Da 460 (531)
|+.|+++++++++++++++++.+..|+++|+++++++.++|++++|+||+++|+|+++||+|||+|+.+++|++|+++||
T Consensus 319 ~~~v~~~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~er~i~DA 398 (542)
T PRK12849 319 AKRVTITKDNTTIVDGAGDKEAIEARVAQIRRQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVELKERKDRVEDA 398 (542)
T ss_pred eeEEEEeeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 461 l~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+|++++++++|||||||++|+++|.+|++++ +.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 399 l~~~~~a~~~g~VpGGGa~e~~ls~~L~~~~-~~~g~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~vi~ 466 (542)
T PRK12849 399 LNATRAAVEEGIVPGGGVALLRAAKALDELA-GLNGDQA-AGVEIVRRALEAPLRQIAENAGLDGSVVVA 466 (542)
T ss_pred HHHHHHHHHcCeecCCCHHHHHHHHHHHHhh-CCChHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 9999999999999999999999999999988 7778777 899999999999999999999999998875
No 3
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=6.5e-101 Score=842.31 Aligned_cols=466 Identities=55% Similarity=0.858 Sum_probs=450.3
Q ss_pred ccccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHH
Q 009601 61 YAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAA 140 (531)
Q Consensus 61 ~~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a 140 (531)
||+|.|.|| +++|+.+++|+..|+++|+|||||+||||||+++.|+++|||||+||||+|+++||++|+||+|++++|
T Consensus 1 ~~~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~iTnDG~TIlk~i~~~~~~~~p~akll~e~a 78 (545)
T PRK12852 1 MAAKDVKFS--GDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVA 78 (545)
T ss_pred CCcchhhcc--HHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCcccChHHHHHHHHH
Confidence 358999999 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhH
Q 009601 141 AKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEV 219 (531)
Q Consensus 141 ~~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l 219 (531)
++||+++||||||+|+||++||+++.+++++|+||..|++||++|++.+++.|+++++++++. ++.++|++|+++++.+
T Consensus 79 ~~q~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~~~~~l~~va~~s~~~~~~l 158 (545)
T PRK12852 79 SKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVKDIEKRAKPVASSAEIAQVGTISANGDAAI 158 (545)
T ss_pred hhcCceecCCcchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHhhhcCChHHH
Confidence 999999999999999999999999999999999999999999999999999999999999876 8999999999889999
Q ss_pred hHHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHH
Q 009601 220 GNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLE 299 (531)
Q Consensus 220 ~~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le 299 (531)
++++++|+.+++++|.|.+..|+++.+.+++++|++|+++|.+|||++++++|+.+++||+|+++|++|+++++++++++
T Consensus 159 ~~li~eA~~~vg~~g~i~v~~g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~~l~n~~Ili~d~~i~~~~~i~~~l~ 238 (545)
T PRK12852 159 GKMIAQAMQKVGNEGVITVEENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTVELDDAYILLHEKKLSGLQAMLPVLE 238 (545)
T ss_pred HHHHHHHHHHhccCCceeeecCCCcceEEEEEEeEEecCCccCCccccccccceEEecCceEEEecCccCCHHHHHHHHH
Confidence 99999999999999999998899875555999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCc
Q 009601 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (531)
Q Consensus 300 ~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG 379 (531)
.+.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||+.++++|+|||++|||++++++.|++++++++++||
T Consensus 239 ~i~~~g~~lvI~~~~i~~~al~~l~~nk~~~~~~i~av~~~~~~~~r~~~l~~ia~~tGa~~i~~~~~~~l~~~~~~~lG 318 (545)
T PRK12852 239 AVVQSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQLISEDLGIKLENVTLKMLG 318 (545)
T ss_pred HHHHhCcCEEEECCCCcHHHHHHHHHhcccccceEEEEecCCcccchHhHHHHHHHhcCCEEEecCcCCCcCCCCHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998888889999999999
Q ss_pred eeeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHH
Q 009601 380 NASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVED 459 (531)
Q Consensus 380 ~~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~D 459 (531)
+|+.|+++++++++++++++++.+.+|+++|+.+++++.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++|
T Consensus 319 ~~~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~R~~~l~~~~~tI~irG~t~~~l~E~er~i~D 398 (545)
T PRK12852 319 RAKKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVED 398 (545)
T ss_pred CCcEEEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 460 ALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 460 al~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
|+|++++++++|||||||++|++++.+|.+++.. ++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 399 Al~a~~~a~~~g~VpGGGa~e~~~s~~L~~~~~~-~~~~q-~~i~~~a~AL~~ip~~La~NaG~d~~~vl~ 467 (545)
T PRK12852 399 ALNATRAAVQEGIVPGGGVALLRAKKAVGRINND-NADVQ-AGINIVLKALEAPIRQIAENAGVEGSIVVG 467 (545)
T ss_pred HHHHHHHHHhcCCCcCchHHHHHHHHHHHHhhcC-CcHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 9999999999999999999999999999998866 56655 999999999999999999999999998875
No 4
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=8.8e-101 Score=838.84 Aligned_cols=465 Identities=62% Similarity=0.913 Sum_probs=447.0
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 62 ~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
|+|.+.|| ++++..|++|+..++++|+|||||+||+|||+++.|+++|||||+||||+|+++||++|+||+|++++|+
T Consensus 1 ~~~~~~~~--~~a~~~~i~a~~~ia~~v~ttLGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~e~a~ 78 (542)
T PRK00013 1 MAKDIKFG--EDARRKLLRGVNKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDPFENMGAQLVKEVAS 78 (542)
T ss_pred CCchhhch--HHHHHHHHHHHHHHHHHhhccCCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCchhhHHHHHHHHHHH
Confidence 36899999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHh
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 220 (531)
+||+++||||||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|+++. +|.++|+||+++++.++
T Consensus 79 ~qd~e~GDGTTtvviLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~~~~~~~l~~va~ts~~~~~~ls 158 (542)
T PRK00013 79 KTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAAVEELKKISKPVEDKEEIAQVATISANGDEEIG 158 (542)
T ss_pred hcCcccCCccchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999866 89999999999999999
Q ss_pred HHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHH
Q 009601 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (531)
Q Consensus 221 ~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (531)
+++++|+..++++|.|.++.+....+.+++++|++|+++|.+|||.+++++++++++||+|+++|++|++++++.+++++
T Consensus 159 ~lv~~Av~~v~~~g~i~i~~~~~~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ilv~d~~i~~~~~l~~~l~~ 238 (542)
T PRK00013 159 KLIAEAMEKVGKEGVITVEESKGFETELEVVEGMQFDRGYLSPYFVTDPEKMEAELENPYILITDKKISNIQDLLPVLEQ 238 (542)
T ss_pred HHHHHHHHHhCcCCcEEEEEcCCCCceEEEEEeEEecCCcccccccccccCCeEEEecCEEEEEcCccCCHHHHHHHHHH
Confidence 99999999999888887765544444449999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCce
Q 009601 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (531)
Q Consensus 301 i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (531)
+.+.|+||||++++|+++++++|..|+++|+++|++||+|+||+.++++|+|||++|||++++++.|++++++++++||+
T Consensus 239 i~~~g~~lvi~~~~I~~~al~~l~~~~~~g~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~ 318 (542)
T PRK00013 239 VAQSGKPLLIIAEDVEGEALATLVVNKLRGTLKVVAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDATLEDLGQ 318 (542)
T ss_pred HHHhCCCEEEECCCCcHHHHHHHHHcCCcccceEEEEecCCcccchhhhHHHHHHHcCCEEecccccCCcccCCHHHCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999998888899999999999
Q ss_pred eeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009601 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (531)
Q Consensus 381 ~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Da 460 (531)
|+.|+++++++++|+++++++.+..|+++|+.+++++.++|++++|+||+++|+|+++||+|||+|+.+++|++|+++||
T Consensus 319 ~~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~g~~~tI~irG~t~~~l~E~er~i~Da 398 (542)
T PRK00013 319 AKKVVVTKDNTTIVDGAGDKEAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDA 398 (542)
T ss_pred eeEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 461 l~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+|++|+++++|+|||||++|++++.+|+++ .+.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 399 l~~vk~al~~g~VpGGGa~e~~~s~~L~~~-~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~vl~ 466 (542)
T PRK00013 399 LHATRAAVEEGIVPGGGVALLRAAPALEAL-KGLNGDEA-TGINIVLRALEAPLRQIAENAGLEGSVVVE 466 (542)
T ss_pred HHHHHHHHHcCcccCcHHHHHHHHHHHHHh-cCCChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 999999999999999999999999999988 66777776 899999999999999999999999998875
No 5
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=1.2e-100 Score=836.65 Aligned_cols=463 Identities=62% Similarity=0.909 Sum_probs=448.6
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhc
Q 009601 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (531)
Q Consensus 64 k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 143 (531)
|.+.|+ +++++.|++|+..++++|+|||||+||+|||+++.|+++|||||+||+|+|+++||++|+||+|++++|++|
T Consensus 2 ~~~~~~--~~a~~~~~~~~~~la~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~akll~~~a~~q 79 (524)
T TIGR02348 2 KQIKFD--EEARKALLRGVDKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDKFENMGAQLVKEVASKT 79 (524)
T ss_pred cccccc--HHHHHHHHHHHHHHHHHhccCcCCCCCcEEEECCCCCeeEeccHHHHHHHccCCChhhHHHHHHHHHHHHcc
Confidence 679999 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHhHH
Q 009601 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNM 222 (531)
Q Consensus 144 d~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~~l 222 (531)
|+++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++++++. +|.++|++|.+++++++++
T Consensus 80 d~e~GDGTTtvviLa~~Ll~~a~~li~~GihP~~Ii~G~~~A~~~~l~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~l 159 (524)
T TIGR02348 80 NDVAGDGTTTATVLAQAIVKEGLKNVAAGANPIELKRGIEKAVEAAVEELKKLSKPVKGKKEIAQVATISANNDEEIGSL 159 (524)
T ss_pred CceeCCCcchHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999866 8999999999999999999
Q ss_pred HHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHHHH
Q 009601 223 IAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAI 302 (531)
Q Consensus 223 i~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~i~ 302 (531)
+++|+..++++|.|.++.|++.+|.+++++|++|+++|.+|||.++++++++.++||+|+++|++|+++++++++++.+.
T Consensus 160 v~~A~~~v~~~~~i~v~~g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~i~~~l~~i~ 239 (524)
T TIGR02348 160 IAEAMEKVGKDGVITVEESKSLETELEVVEGMQFDRGYISPYFVTDAEKMEVELENPYILITDKKISNIKDLLPLLEKVA 239 (524)
T ss_pred HHHHHHHhCcCCcEeeecCCCccccEEEEEeEEEcCCCCCcccccCccCCeEEeeCceeeeccCCcCCHHHHHHHHHHHH
Confidence 99999999998988888898887766999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceee
Q 009601 303 RGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNAS 382 (531)
Q Consensus 303 ~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~ 382 (531)
+.|+||||++++|+++++++|..|+++|+++|++||+|+||+.++++|+|||++|||++++++.|++++++++++||+|+
T Consensus 240 ~~g~~lvi~~~~i~~~al~~l~~n~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~ 319 (524)
T TIGR02348 240 QSGKPLLIIAEDVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLEDIAILTGGQVISEELGLKLEEVTLDDLGKAK 319 (524)
T ss_pred HhCcCEEEECCCCChHHHHHHHHhhcccccceEEEECCCccchhhhhHHHHHHHhCCEEecccccCCcCcCCHHHCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred EEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Q 009601 383 KVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALN 462 (531)
Q Consensus 383 ~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~ 462 (531)
.|++.++++++++++++++.+..|+++++++++++.++|++++|+||+++|+|+++||+|||+|+.+++|++|+++||+|
T Consensus 320 ~v~~~~~~~~~i~~~~~~~~~~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~Dal~ 399 (524)
T TIGR02348 320 KVTVDKDNTTIVEGAGDKAAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKKLRVEDALN 399 (524)
T ss_pred EEEEeecEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 463 ATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 463 a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++|+++++|||||||++||+++.+|++ ..+.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 400 ~~r~a~~~g~VpGGGa~e~~~s~~L~~-~~~~~~~~~-~~~~~~a~AL~~ip~~La~NaG~d~~~v~~ 465 (524)
T TIGR02348 400 ATRAAVEEGIVPGGGVALLRAAAALEG-LKGDNEDEA-IGIDIVKRALEAPLRQIAENAGKDGAVVAE 465 (524)
T ss_pred HHHHHHhcCCccCCcHHHHHHHHHHHH-hccCChHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 999999999999999999999999998 666677666 899999999999999999999999998875
No 6
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.6e-100 Score=837.72 Aligned_cols=466 Identities=57% Similarity=0.869 Sum_probs=448.4
Q ss_pred ccccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHH
Q 009601 61 YAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAA 140 (531)
Q Consensus 61 ~~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a 140 (531)
||+|.++|+ +++++.+++|+..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||++|+||+|++++|
T Consensus 1 ~~~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~G~~~ITnDG~tIlk~i~i~hp~~~~ga~ll~~~a 78 (544)
T PRK12850 1 MAAKEIRFS--TDARDRLLRGVNILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVKEVA 78 (544)
T ss_pred CCcceeccc--HHHHHHHHHHHHHHHHHHhCCcCCCCCCEEEECCCCCeeEeccHHHHHHHhcCCChhhhHHHHHHHHHH
Confidence 358999999 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhH
Q 009601 141 AKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEV 219 (531)
Q Consensus 141 ~~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l 219 (531)
++||+++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++++++. +|.++|++|+++++.+
T Consensus 79 ~~qd~e~GDGTTt~viLa~~LL~~a~~li~~GihP~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~l 158 (544)
T PRK12850 79 SKTNDLAGDGTTTATVLAQAIVREGAKLVAAGMNPMDLKRGIDLAVAAVVDELKKIAKKVTSSKEIAQVATISANGDESI 158 (544)
T ss_pred hhhcchhcCCcchHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999866 8999999999999999
Q ss_pred hHHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHH
Q 009601 220 GNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLE 299 (531)
Q Consensus 220 ~~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le 299 (531)
++++++|+..++++|.|.++.+....+++++++|++|+++|.+|||+++.++++.+++||+|+++|+++++.++++++++
T Consensus 159 ~~lv~eAv~~vg~~g~i~v~~~~~~g~~~~~v~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~l~ 238 (544)
T PRK12850 159 GEMIAEAMDKVGKEGVITVEEAKTLGTELDVVEGMQFDRGYLSPYFVTNPEKMRAELEDPYILLHEKKISNLQDLLPILE 238 (544)
T ss_pred HHHHHHHHHHhcccCceeeEEccccCcceEEEEeEEecCccCcCccccccccCeEEEeCCEEEEEecccCCHHHHHHHHH
Confidence 99999999999988888876666566666999999999999999999988899999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCc
Q 009601 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (531)
Q Consensus 300 ~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG 379 (531)
++.+.|+||||++++|+++++++|..|+++|.++++|||+|+||++++++|+|||++|||++++++.+++++++++++||
T Consensus 239 ~i~~~g~~lvI~~~~I~d~al~~l~~n~i~~~~~~~avk~p~~g~~~~~~le~ia~~tG~~~i~~~~~~~~~~~~~~~LG 318 (544)
T PRK12850 239 AVVQSGRPLLIIAEDVEGEALATLVVNKLRGGLKSVAVKAPGFGDRRKAMLEDIAVLTGGQVISEDLGIKLENVTLDMLG 318 (544)
T ss_pred HHHHhCCCEEEECCCCChHHHHHHHHcCCcccceEEEEeCCCcCcccHHHHHHHHHHhCCEEeccccCCCcccCCHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999998888889999999999
Q ss_pred eeeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHH
Q 009601 380 NASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVED 459 (531)
Q Consensus 380 ~~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~D 459 (531)
+|++|++.+++++++++|++++.+..|+++++++++++.++|++++|+||++||+|+++||+|||+|+.+++|++|+++|
T Consensus 319 ~~~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~D 398 (544)
T PRK12850 319 RAKRVLITKENTTIIDGAGDKKNIEARVKQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDD 398 (544)
T ss_pred CCcEEEEEeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhcCCeEEEEECCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 460 ALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 460 al~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
|++++++++++|||||||++|++++..|+++ .+.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 399 Al~~~k~a~~~g~VpGGGa~e~~~s~~L~~~-~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~v~~ 467 (544)
T PRK12850 399 ALHATRAAVEEGIVPGGGVALLRARSALRGL-KGANADET-AGIDIVRRALEEPLRQIATNAGFEGSVVVG 467 (544)
T ss_pred HHHHHHHHHhcCCccCCcHHHHHHHHHHHhc-cCCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 9999999999999999999999999999988 56667666 899999999999999999999999998875
No 7
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=2.2e-100 Score=839.10 Aligned_cols=465 Identities=53% Similarity=0.847 Sum_probs=449.6
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 009601 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (531)
Q Consensus 63 ~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (531)
++++.|+ ++++..|++||..|+++|+|||||+||||||++++|+|+|||||+||+|+|+++||++|+||+|++++|++
T Consensus 14 ~~~~~~~--~~a~~~~i~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDG~TIlk~i~~~~p~~~~~a~ll~~~a~~ 91 (555)
T PTZ00114 14 GKEIRFG--DEARQSLLKGIERLADAVAVTLGPKGRNVIIEQEYGSPKITKDGVTVAKAIEFSDRFENVGAQLIRQVASK 91 (555)
T ss_pred hhhhhhH--HHHHHHHHHHHHHHHHHHhccCCCCCCcEEEECCCCCeEEeeChHHHHHhcCcCCcchhHHHHHHHHHHHh
Confidence 6778888 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHhH
Q 009601 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (531)
Q Consensus 143 qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~~ 221 (531)
||+++||||||+||||++||+++.+++++|+||..|++||++|.+.++++|+++++++++. +|.++|+||+++++++++
T Consensus 92 qd~evGDGTTtvvvLa~~LL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~ 171 (555)
T PTZ00114 92 TNDKAGDGTTTATILARAIFREGCKAVAAGLNPMDLKRGIDLAVKVVLESLKEQSRPVKTKEDILNVATISANGDVEIGS 171 (555)
T ss_pred hccccCCcccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHcCChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999766 899999999998999999
Q ss_pred HHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHHH
Q 009601 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (531)
Q Consensus 222 li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~i 301 (531)
++++|+..++++|.|.+++|++++|++++++|++|+++|.+|||++++++|+.+++||+|+++|++|+++++++++++++
T Consensus 172 li~eAv~~vg~~g~I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~L~~~~~i~~~le~i 251 (555)
T PTZ00114 172 LIADAMDKVGKDGTITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKVELENPLILVTDKKISSIQSILPILEHA 251 (555)
T ss_pred HHHHHHHHhCcCCcEEEcCCCCccceEEEEEEEEEeccccccccccccccCeEEecCCEEEEEcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecC-CCccccCCCCCCCce
Q 009601 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDE-VGLALDKVGKEVLGN 380 (531)
Q Consensus 302 ~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~-~~~~l~~~~~~~lG~ 380 (531)
.+.|+||||++++|+++++++|..|+++|.++|+|||.|++|++++++|+|||++|||+++++. .+..++++++++||+
T Consensus 252 ~~~~~~llI~~~~i~~~al~~L~~n~~~g~~~i~avk~~~~g~~~~~~l~~la~~tG~~~i~~~~~~~~l~~~~~~~LG~ 331 (555)
T PTZ00114 252 VKNKRPLLIIAEDVEGEALQTLIINKLRGGLKVCAVKAPGFGDNRKDILQDIAVLTGATVVSEDNVGLKLDDFDPSMLGS 331 (555)
T ss_pred HHhCCCEEEECCCCcHHHHHHHHHhCCCCceEEEEEecCCCCcchHHHHHHHHHHhCCEEecccccccCcccCCHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999986 677778899999999
Q ss_pred eeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009601 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (531)
Q Consensus 381 ~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Da 460 (531)
|++|+++++++++++++++++.|+.|+++++.++++..++|++++|+||+++|+++++||+|||+|+.+++|++|+++||
T Consensus 332 a~~v~~~~~~~~~~~~~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~i~G~t~~~l~E~~r~i~Da 411 (555)
T PTZ00114 332 AKKVTVTKDETVILTGGGDKAEIKERVELLRSQIERTTSEYDKEKLKERLAKLSGGVAVIKVGGASEVEVNEKKDRIEDA 411 (555)
T ss_pred CceEEEEeceEEEEeCCCcHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCeeccCchhHhHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKE--TLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 461 l~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~--~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+|++++++++|||||||++|+++|..|++++. +.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 412 l~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~~~-~~i~~~a~AL~~ip~~La~NaG~d~~~v~~ 482 (555)
T PTZ00114 412 LNATRAAVEEGIVPGGGVALLRASKLLDKLEEDNELTPDQR-TGVKIVRNALRLPTKQIAENAGVEGAVVVE 482 (555)
T ss_pred HHHHHHHHhcCcccCCcHHHHHHHHHHHHHhhccCCchHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 99999999999999999999999999998875 4667766 899999999999999999999999998875
No 8
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=9.5e-100 Score=828.27 Aligned_cols=463 Identities=63% Similarity=0.933 Sum_probs=449.1
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhc
Q 009601 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (531)
Q Consensus 64 k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 143 (531)
|.+.|| .+++..|++|+..|+++|+|||||+||+|||++++|+++|||||+||+|+|+++||++|+||+|++++|++|
T Consensus 1 ~~~~~g--~~a~~~~i~~~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~a~ll~~~a~~q 78 (520)
T cd03344 1 KDIKFG--EEARKALLRGVNKLADAVKVTLGPKGRNVVIEKSFGSPKITKDGVTVAKEIELEDPFENMGAQLVKEVASKT 78 (520)
T ss_pred Ccccch--HHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEECCCCCeEEEecHHHHHHHcccCCcchhHHHHHHHHHHhhh
Confidence 467888 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHhHH
Q 009601 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNM 222 (531)
Q Consensus 144 d~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~~l 222 (531)
|+++||||||+++|+++||+++.+++++|+||..|++||+.|.+.++++|+++++++++. +|.++|+|+++++++++++
T Consensus 79 d~e~GDGTTtvviLa~~Ll~~~~~li~~gi~p~~I~~G~~~a~~~~~~~L~~~~~~i~~~~~l~~va~ts~~~~~~l~~l 158 (520)
T cd03344 79 NDVAGDGTTTATVLARAIIKEGLKAVAAGANPMDLKRGIEKAVEAVVEELKKLSKPVKTKEEIAQVATISANGDEEIGEL 158 (520)
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999866 8999999999999999999
Q ss_pred HHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHHHH
Q 009601 223 IAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAI 302 (531)
Q Consensus 223 i~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~i~ 302 (531)
+++|+..++++|.|.+++|++++|++++++|++|+++|.+|+|.+++++|+++++||+|+++|+++++++++.++++.+.
T Consensus 159 v~~A~~~v~~~~~i~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~l~~~~~l~~~l~~i~ 238 (520)
T cd03344 159 IAEAMEKVGKDGVITVEEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENPYILLTDKKISSIQELLPILELVA 238 (520)
T ss_pred HHHHHHHhccCCcEEEEeCCCcceeEEEEeeEEecCCCCCCccccCcccCeEEeeCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 99999999988888889999999966999999999999999999998889999999999999999999999999999999
Q ss_pred hcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceee
Q 009601 303 RGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNAS 382 (531)
Q Consensus 303 ~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~ 382 (531)
+.|+||||++++|+++++++|..|+++|.+++++||.|++|++++++|+|||.+|||++++++.+++++++++++||+|+
T Consensus 239 ~~~~~lvi~~~~i~~~al~~l~~~~i~~~~~v~avk~~~~~~~~~~~l~~la~~tGa~~~~~~~~~~~~~~~~~~LG~~~ 318 (520)
T cd03344 239 KAGRPLLIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDVTLEDLGRAK 318 (520)
T ss_pred hhCCCEEEEcCCCCHHHHHHHHHcCCccCceEEEEeCCCCCcccHHHHHHHHHHhCCEEecccccCCcccCCHHHCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred EEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Q 009601 383 KVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALN 462 (531)
Q Consensus 383 ~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~ 462 (531)
+|++++++++++++|++++.++.|+++++.+++++.++|++++|+||+++|+|++|||+|||+|+.+++|++|+++||+|
T Consensus 319 ~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~~r~i~Dal~ 398 (520)
T cd03344 319 KVVVTKDDTTIIGGAGDKAAIKARIAQIRKQIEETTSDYDKEKLQERLAKLSGGVAVIKVGGATEVELKEKKDRVEDALN 398 (520)
T ss_pred EEEEeeceEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEEecCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 463 ATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 463 a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++++++++|+|||||++||+++++|++++. .++.+| +++++|++||+.||++|++|||+|+.+++.
T Consensus 399 ~~k~a~~~g~VpGGGa~e~~~s~~L~~~~~-~~~~~~-~~~~~~a~Al~~ip~~La~NaG~d~~~vi~ 464 (520)
T cd03344 399 ATRAAVEEGIVPGGGVALLRASPALDKLKA-LNGDEK-LGIEIVRRALEAPLRQIAENAGVDGSVVVE 464 (520)
T ss_pred HHHHHHhcCCCcCCcHHHHHHHHHHHHhcc-CChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 999999999999999999999999999987 777766 899999999999999999999999998875
No 9
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=8.5e-100 Score=831.58 Aligned_cols=465 Identities=58% Similarity=0.881 Sum_probs=446.2
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 62 ~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
|+|.+.|+ +++++.+++|+..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||++|+||+|++++|+
T Consensus 2 ~~~~~~~~--~~a~~~~~~~~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~~~a~ 79 (541)
T PRK12851 2 AAKEVKFH--VEAREKMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPTITNDGVTIAKEIELEDKFENMGAQMVREVAS 79 (541)
T ss_pred Ccceeccc--HHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEECCCCCeeEecCHHHHHHHccCCCchhhHHHHHHHHHHH
Confidence 57999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHh
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 220 (531)
+||+++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++++++. ++.++|++++++++.++
T Consensus 80 ~qd~e~GDGTTtvviLa~~LL~~a~~li~~Gihp~~I~~G~~~a~~~~~~~L~~~s~~~~~~~~l~~va~~s~~~~~~l~ 159 (541)
T PRK12851 80 KTNDVAGDGTTTATVLAQAIVREGAKAVAAGANPMDLKRGIDRAVAAVVEELKANARPVTTNAEIAQVATISANGDAEIG 159 (541)
T ss_pred hhhHhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999866 89999999999999999
Q ss_pred HHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHH
Q 009601 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (531)
Q Consensus 221 ~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (531)
+++++|+..++++|.|.++.+....+++++++|++|+++|.+|||++++++|+++++||+|+++|+++++.+++.++++.
T Consensus 160 ~lv~~Av~~vg~~g~i~i~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~ 239 (541)
T PRK12851 160 RLVAEAMEKVGNEGVITVEESKTAETELEVVEGMQFDRGYLSPYFVTDADKMEAELEDPYILIHEKKISNLQDLLPVLEA 239 (541)
T ss_pred HHHHHHHHHhcccCceEEEEccCCCcceEEEEEEEecCCccccccccCCCCCeEEecccEEEEEcCCcCcHHHHHHHHHH
Confidence 99999999999888777755444444459999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCce
Q 009601 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (531)
Q Consensus 301 i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (531)
+.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||++++++|+|||++|||++++++.+++++++++++||+
T Consensus 240 i~~~~~~lvi~~~~I~~~al~~l~~n~i~g~~~i~av~~p~~~~~~~~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~ 319 (541)
T PRK12851 240 VVQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLENVTLEQLGR 319 (541)
T ss_pred HHHhCcCEEEECCCCChHHHHHHHHcCCcCceeEEEEecCccccccHhHHHHHHHHhCCEEeccCCCCCcCcCCHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988888899999999999
Q ss_pred eeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009601 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (531)
Q Consensus 381 ~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Da 460 (531)
|+.|++.+++|+++++|++++.+.+|+++++++++++.++|++++|+||+++|+|+++||+|||+|+.+++|++|+++||
T Consensus 320 ~~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~er~i~DA 399 (541)
T PRK12851 320 AKKVVVEKENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGASTEVEVKEKKDRVDDA 399 (541)
T ss_pred ccEEEEEcceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 461 l~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++++++++++|||||||++|+++|.+|++++.. ++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 400 l~a~~~al~~g~VpGGGa~e~~~s~~L~~~~~~-~~~~~-~~~~~~a~AL~~ip~~La~NaG~d~~~vl~ 467 (541)
T PRK12851 400 LHATRAAVEEGIVPGGGVALLRAVKALDKLETA-NGDQR-TGVEIVRRALEAPVRQIAENAGAEGSVVVG 467 (541)
T ss_pred HHHHHHHHHcCcccCchHHHHHHHHHHHHHhcC-CcHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 999999999999999999999999999998865 66666 899999999999999999999999998875
No 10
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=8.2e-100 Score=830.90 Aligned_cols=465 Identities=57% Similarity=0.883 Sum_probs=446.6
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 62 ~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
|+|.+.|+ +++|+.+++||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||++++|++|++++|.
T Consensus 1 ~~~~~~~~--~~~~~~~~~g~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~a~~g~~li~~~a~ 78 (529)
T CHL00093 1 MSKKILYQ--DNARRALERGMDILAEAVSVTLGPKGRNVVLEKKYGSPQIVNDGVTIAKEIELEDHIENTGVALIRQAAS 78 (529)
T ss_pred CCceeecC--HHHHHHHHHHHHHHHHHHhcccCCCCCcEEEECCCCCeeEeccHHHHHHHccCcCHHHHHHHHHHHHHHH
Confidence 37899999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHh
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 220 (531)
+|++++||||||+|||+++||+++.+++++|+||..|++||++|.+.+++.|+++++++++. +|.+||++|+++++.|+
T Consensus 79 ~~~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~d~~~L~~VA~ts~~~~~~l~ 158 (529)
T CHL00093 79 KTNDVAGDGTTTATVLAYAIVKQGMKNVAAGANPISLKRGIEKATQYVVSQIAEYARPVEDIQAITQVASISAGNDEEVG 158 (529)
T ss_pred hcCceecCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHhccChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999866 89999999999999999
Q ss_pred HHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCH-HHHHHHHH
Q 009601 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA-RDLINVLE 299 (531)
Q Consensus 221 ~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~-~~l~~~le 299 (531)
+|+++|+.+++++|.|.++.|+..++.+++++|++|+++|.+|||++++++|+.+++||+|+++|++|+.. .+++++++
T Consensus 159 ~lv~eAv~~vg~~g~i~~~~g~~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~~l~n~~Ili~d~~le~~~~~i~~~l~ 238 (529)
T CHL00093 159 SMIADAIEKVGREGVISLEEGKSTVTELEITEGMRFEKGFISPYFVTDTERMEVVQENPYILLTDKKITLVQQDLLPILE 238 (529)
T ss_pred HHHHHHHHHhccCCceeecCCCccceeeEEEeeEEecCccCcCccccCCccceEEecCceehhhcCCCCchHHHHHHHHH
Confidence 99999999999989888877776666669999999999999999999999999999999999999999987 78999999
Q ss_pred HHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCc
Q 009601 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (531)
Q Consensus 300 ~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG 379 (531)
.+.+.|.|++|++++|+++++++|+.|+.+|+++|+||+.|++|++++++|+|||++|||++++++.|++++++++++||
T Consensus 239 ~i~~~~~~lvi~~~~i~~~al~~l~l~k~~g~~~i~avr~~~~~~~~k~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG 318 (529)
T CHL00093 239 QVTKTKRPLLIIAEDVEKEALATLVLNKLRGIVNVVAVRAPGFGDRRKAMLEDIAILTGGQVITEDAGLSLETIQLDLLG 318 (529)
T ss_pred HHHhcCCCEEEEcCCCChHHHHHHHHhhhcccceEEEEecCCCCcchHHHHHHHHHhhCCEEecccccCCcCCCCHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999888889999999999
Q ss_pred eeeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHH
Q 009601 380 NASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVED 459 (531)
Q Consensus 380 ~~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~D 459 (531)
+|++|++.++++++++ .++++.+..|+++++++++.+.++|++++|+||+++|+|+++||+|||+|+.+++|++|+++|
T Consensus 319 ~~~~v~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~eR~~~l~g~~~~I~irg~t~~~l~E~er~i~D 397 (529)
T CHL00093 319 QARRIIVTKDSTTIIA-DGNEEQVKARCEQLRKQIEIADSSYEKEKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLED 397 (529)
T ss_pred cceEEEEecCEEEEEe-cCcHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHhcCCeEEEEeccCcHHHHHHHHHHHHH
Confidence 9999999999999998 567899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCeeccCchhHhHHHHHHHHHhc-cCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 460 ALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKE-TLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 460 al~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~-~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
|++++|+++++|+|||||++||++|.+|++++. +.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 398 Al~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~g~~~-~~i~~~a~AL~~ip~~La~NaG~d~~~v~~ 468 (529)
T CHL00093 398 AINATKAAVEEGIVPGGGATLVHLSENLKTWAKNNLKEDEL-IGALIVARAILAPLKRIAENAGKNGSVIIE 468 (529)
T ss_pred HHHHHHHHHHcCcccCCcHHHHHHHHHHHHHhccCCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 999999999999999999999999999999876 6777776 899999999999999999999999998764
No 11
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=6e-99 Score=825.07 Aligned_cols=464 Identities=54% Similarity=0.848 Sum_probs=447.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 009601 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (531)
Q Consensus 63 ~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (531)
+|.+.|| .++++.|++|+..++++|+|||||+||||||+++.|+|+|||||+||+|+|++++|++|+||+|++++|++
T Consensus 3 ~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~d~~~~pgakll~e~a~~ 80 (546)
T PRK14104 3 AKEVKFG--VDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASK 80 (546)
T ss_pred cceecch--HHHHHHHHHHHHHHHHHHhhccCCCCCceEEEcCCCCeeEeccHHHHHHHhcCCCcccChHHHHHHHHHHh
Confidence 6899999 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHhH
Q 009601 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (531)
Q Consensus 143 qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~~ 221 (531)
||+++||||||+||||++||+++.+++++|+||..|++||++|.+.+++.|+++++++++. ++.++|++|.++++.+++
T Consensus 81 qd~e~GDGTTTvvvLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~v~~~~~l~~va~~s~~~d~~i~~ 160 (546)
T PRK14104 81 SADAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIGK 160 (546)
T ss_pred hcccccCcccHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcCchHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999866 799999999999999999
Q ss_pred HHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHHH
Q 009601 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (531)
Q Consensus 222 li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~i 301 (531)
++++|+..++++|.|.++.+++++|++++++|++|+++|.+|||+++++.++.++++|+|+++|.+++++++++++++.+
T Consensus 161 lv~~Av~~vg~~g~i~v~~~~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~i 240 (546)
T PRK14104 161 FLADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEKKLSSLNELLPLLEAV 240 (546)
T ss_pred HHHHHHHHhccCCceeeEecccccceEEEEEEEEEeCCCCCcchhcCcccCceeeeCcEEEEehhhhcCHHHHHHHHHHH
Confidence 99999999999999999888888766699999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCcee
Q 009601 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (531)
Q Consensus 302 ~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~ 381 (531)
.+.|+||||++++|+++|+++|..|+++|.++|+|||+|+||+.++++|+|||++|||++++++.+++++++++++||+|
T Consensus 241 ~~~g~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~av~~~~~g~~r~~~l~~ia~~tG~~~i~~~~~~~l~~~~~~~LG~a 320 (546)
T PRK14104 241 VQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLQMLGRA 320 (546)
T ss_pred HHhCcCEEEECCCCcHHHHHHHHhCcccceeeEEEEeccCCCcchHHHHHHHHHHhCCEEEecCCCCCcCcCCHHHCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred eEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Q 009601 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (531)
Q Consensus 382 ~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal 461 (531)
+++++++++++++++|++++.+.+|+++|+.+++++.++|++++|+||+++|+++++||+|||+|+.+++|++|+++||+
T Consensus 321 ~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r~i~Dal 400 (546)
T PRK14104 321 KKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 400 (546)
T ss_pred eEEEEcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 462 ~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
|++++++++|||||||++|++++..|+++. ...+.+ ++++++|++||+.||++||+|||+|+.+++.
T Consensus 401 ~a~~~ai~~g~VpGGGa~e~~~s~~L~~~~-~~~~~~-~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~ 467 (546)
T PRK14104 401 HATRAAVEEGIVPGGGVALLRASEQLKGIK-TKNDDQ-KTGVEIVRKALSAPARQIAINAGEDGSVIVG 467 (546)
T ss_pred HHHHHHHHcCcCcCchHHHHHHHHHHHHhh-cCChHH-HHHHHHHHHHHHhhHHHHHHhCCCCHHHHHH
Confidence 999999999999999999999999999874 344444 4999999999999999999999999998875
No 12
>KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.4e-94 Score=745.19 Aligned_cols=467 Identities=56% Similarity=0.838 Sum_probs=457.2
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 62 ~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
.+|+|+|| .++|..+++|++.|+++|.+|+||+|||++|.+.+|.|+|||||.|+++++++.++++|+||+|+++++.
T Consensus 15 ~ak~i~fg--~~~r~~ll~Gv~~Ladav~~TlgpKgrnViieq~~gsPkvtkdgvTva~si~l~d~~~n~gaklvq~va~ 92 (550)
T KOG0356|consen 15 YAKDIKFG--KDVRAKLLQGVDLLADAVAVTLGPKGRNVIIEQSWGSPKVTKDGVTVAKSIELKDKYENIGAKLVQDVAN 92 (550)
T ss_pred cccccccC--HHHHHHHHhhHHHHHHHhhhhccCCcceEEcccccCCCceecCCceeeccccccchhhhhccHHHHHHHh
Confidence 38999999 8899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHh
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 220 (531)
++++.+||||||+++|++++..++..-+.+|.+|.+|++|+..+++.+.+.|++++++|+.. ++.+||++|+++|.+++
T Consensus 93 ~tN~~agdGtttatvlar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~eeIaqVAtiSAngD~~ig 172 (550)
T KOG0356|consen 93 NTNEEAGDGTTTATVLARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTPEEIAQVATISANGDKEIG 172 (550)
T ss_pred hccCccccCcchHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhhhcCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987 99999999999999999
Q ss_pred HHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHH
Q 009601 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (531)
Q Consensus 221 ~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (531)
+++.+|+.+++++|+|+++.|.+++|++++++||.||+||++|||+++++.+.++|++|++++.+.+|++++++.|.+|.
T Consensus 173 ~li~~a~~kvG~~GVItv~~gkt~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll~~kki~~v~~ivp~LE~ 252 (550)
T KOG0356|consen 173 NLISDAMKKVGRKGVITVKDGKTLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLLSEKKISSVQSIVPALEL 252 (550)
T ss_pred HHHHHHHHHhCcCCeEEeecCCccccchhhhhcccccccccCccccccchhhhhhhhhhhhhhhhhhhhHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCC-ccccCCCCCCCc
Q 009601 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVG-LALDKVGKEVLG 379 (531)
Q Consensus 301 i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~-~~l~~~~~~~lG 379 (531)
..+...||+|++++|+.++|.+|+.|++++.++++|||+|+||+.++..+.||+.+||++++.++.+ ++++..++++||
T Consensus 253 A~~~~~PLliIAeDi~~eaL~tLIlNkLk~glqV~AvKapgfGdnrk~~l~Diai~Tg~~v~~~e~~~l~le~~~~~dLG 332 (550)
T KOG0356|consen 253 ALAKRRPLLIIAEDIDGEALATLVLNKLKGGLQVVAVKAPGFGDNRKNLLKDIAILTGATVFGEELSTLNLEDAKLEDLG 332 (550)
T ss_pred hhhccCceEEEehhcchhHHHHHHhhhhccceeEEEEecCCCcchHHHhhhHHHHHhhhhhhccchhhcccccCchhhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999988 789999999999
Q ss_pred eeeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHH
Q 009601 380 NASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVED 459 (531)
Q Consensus 380 ~~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~D 459 (531)
.|.++.+++++++++.+.++++.++.||+|++..++.+.++|++++++||+++|+|++++|.+||.|+.|++|++.+++|
T Consensus 333 ~~~evvvtkd~t~ll~g~~~~~~v~~rIeqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~ekk~rv~d 412 (550)
T KOG0356|consen 333 EVGEVVVTKDDTMLLKGKGNKAQVEGRIEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNEKKDRVED 412 (550)
T ss_pred cceeEEEecCcceeeCCCCCHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 009601 460 ALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEK 531 (531)
Q Consensus 460 al~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~k 531 (531)
|||++++|+++|+|||||+++++|+..|.++.. .++.+|+.|++++.+||..|..+|++|||.|+..+++|
T Consensus 413 alnat~aaveeGivpGGG~all~~~~~l~~lk~-~~~~~~k~G~eiv~~Al~~P~~~IakNAGvdg~~vv~K 483 (550)
T KOG0356|consen 413 ALNATRAAVEEGIVPGGGTALLRAIPVLDELKA-TNNFDQKVGVEIVKKALRLPAQTIAKNAGVDGSVVVEK 483 (550)
T ss_pred HHHHHHHHhhcCcccCCchHHHHhhhhhhhccc-ccchHhhhhHHHHHHHHhhhHHHHHHhcCCchHHHHHH
Confidence 999999999999999999999999999998876 56778889999999999999999999999999988765
No 13
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=9.8e-81 Score=681.30 Aligned_cols=399 Identities=25% Similarity=0.395 Sum_probs=365.0
Q ss_pred cccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhccc
Q 009601 66 LHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTND 145 (531)
Q Consensus 66 i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~ 145 (531)
...| .++++.|++||..|+++++|||||+||+|||+++.|+++|||||+||||+|+++||+ |+|++++|++||+
T Consensus 11 ~~~~--~~~~~~ni~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~qd~ 84 (519)
T TIGR02339 11 RTKG--RDAQRNNIAAAKAVAEAVKSTLGPRGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQDA 84 (519)
T ss_pred cccH--HHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeECCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHHHHH
Confidence 4444 789999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-hhHHhhhhccCCh------
Q 009601 146 LAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGNN------ 216 (531)
Q Consensus 146 ~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~~~------ 216 (531)
++||||||+|+|+++||+++.+++++|+||+.|++||++|.+.++++|++++++++. . .|.++|+|+++++
T Consensus 85 ~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~v~~~~~~~L~~ia~tsl~sk~~~~~~ 164 (519)
T TIGR02339 85 EVGDGTTTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATKISPEDRDLLKKVAETSLTGKASAEVT 164 (519)
T ss_pred HhCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcccHHHHHHHHHhhhccccccchh
Confidence 999999999999999999999999999999999999999999999999999999865 3 7999999998754
Q ss_pred -hhHhHHHHHHHHhhcc---CCc---------eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEee
Q 009601 217 -YEVGNMIAEAMSKVGR---KGV---------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (531)
Q Consensus 217 -~~l~~li~~A~~~v~~---~g~---------I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll 283 (531)
++|++++++|+.++++ +|. |...+|++++|| ++++|++|+++|.+| +|+.+++||+|++
T Consensus 165 ~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~vi~~~~~~~-------~m~~~i~n~kIll 236 (519)
T TIGR02339 165 KDKLANLVVEAVKQVAEKRGDGKYYVDLDNIKIEKKTGGSIDDT-ELVEGIVVDKEPVHP-------GMPKRVKNAKIAL 236 (519)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccCHHHeEEEEccCcChhcc-eeEeeEEEecCCCCC-------CCccccCCCcEEE
Confidence 8899999999999985 453 333799999999 999999999999987 3778899999999
Q ss_pred eccc-------------cCCHHHHHHHHH-----------HHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeec
Q 009601 284 VDKK-------------ITNARDLINVLE-----------DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (531)
Q Consensus 284 ~d~~-------------i~~~~~l~~~le-----------~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~ 339 (531)
++++ +++++++.++++ .+++.|+||||++++|+++++++|..+ ++++|+
T Consensus 237 l~~~Le~~~~~~~~~~~i~~~~~~~~~l~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~------gI~~v~- 309 (519)
T TIGR02339 237 LDAPLEVEKTEIDAKIRITDPDQIKKFLDQEEAMLKEMVDKIADAGANVVFCQKGIDDLAQHYLAKA------GILAVR- 309 (519)
T ss_pred EeccccccccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCCccHHHHHHHHHC------CCEEEe-
Confidence 9998 677777766655 899999999999999999999999754 456665
Q ss_pred CCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHh
Q 009601 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (531)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~ri~~l~~~l~~ 416 (531)
++++++|+|||++|||++++ ++++++++.||+|++|++. ++++++|++|+++
T Consensus 310 ----~v~~~~L~rIa~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~---------------- 364 (519)
T TIGR02339 310 ----RVKKSDIEKLARATGAKIVS-----SIKEITESDLGYAGLVEERKVGDDKMTFVEGCKNP---------------- 364 (519)
T ss_pred ----cCCHHHHHHHHHHhCCEEeC-----chhhCChhhccCCceEEEEEECCeEEEEEEcCCCC----------------
Confidence 56699999999999999998 5888888999999999865 4899999988653
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCC
Q 009601 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (531)
Q Consensus 417 ~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~ 495 (531)
..+||+|||+|+.+++|.+|+++||++++++++++| ||||||++||++|..|++++.+.+
T Consensus 365 -------------------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~ 425 (519)
T TIGR02339 365 -------------------KAVTILLRGGTEHVVDELERSIQDALHVVASALEDGKVVAGGGAVEIELALRLRSYARKIG 425 (519)
T ss_pred -------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEeeCCCHHHHHHHHHHHHHhhcCC
Confidence 588999999999999999999999999999999999 999999999999999999988787
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 496 ~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+.+| +++++|++||+.||++|++|||+|+.+++.
T Consensus 426 ~~~~-~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~ 459 (519)
T TIGR02339 426 GREQ-LAIEAFADALEEIPRILAENAGLDPIDALV 459 (519)
T ss_pred CHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 8777 899999999999999999999999998875
No 14
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=2.1e-80 Score=678.79 Aligned_cols=400 Identities=25% Similarity=0.386 Sum_probs=366.4
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcc
Q 009601 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (531)
Q Consensus 65 ~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd 144 (531)
+..+| .++++.|++||..|+++|++||||+||+|||+++.|+++|||||+||+++|+++||. |+|++++|++||
T Consensus 9 ~~~~~--~~~~~~n~~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~ 82 (517)
T cd03343 9 QRTSG--RDAQRMNIAAAKAVAEAVRTTLGPKGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQD 82 (517)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHhCCCCCCCCCceeEcCCCCEEEEccHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 34555 789999999999999999999999999999999999999999999999999999997 999999999999
Q ss_pred cccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-hhHHhhhhccCCh-----
Q 009601 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGNN----- 216 (531)
Q Consensus 145 ~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~~----- 216 (531)
+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.+++.|++++++++ +. .|.+||+||++++
T Consensus 83 ~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~va~ts~~sk~~~~~ 162 (517)
T cd03343 83 EEVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVDPDDKDTLRKIAKTSLTGKGAEAA 162 (517)
T ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhhcccchhhH
Confidence 999999999999999999999999999999999999999999999999999999986 44 8999999999864
Q ss_pred -hhHhHHHHHHHHhhccCCc---------eEe--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009601 217 -YEVGNMIAEAMSKVGRKGV---------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (531)
Q Consensus 217 -~~l~~li~~A~~~v~~~g~---------I~v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~ 284 (531)
+.|++++++|+.++++++. |.+ .+|++++|| ++++|++|+++|.+|+ |+..++||+|+++
T Consensus 163 ~~~l~~l~~~A~~~v~~~~~~~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~v~~~~~~~~~-------m~~~~~n~~Illl 234 (517)
T cd03343 163 KDKLADLVVDAVLQVAEKRDGKYVVDLDNIKIEKKTGGSVDDT-ELIRGIVIDKEVVHPG-------MPKRVENAKIALL 234 (517)
T ss_pred HHHHHHHHHHHHHHhhhccCCCccccHHHeeEEeecCcCHHHc-ceeeeEEEeccCCCCC-------CccccCCCcEEEE
Confidence 8999999999999987532 555 799999999 8999999999999987 4567899999999
Q ss_pred ccc-------------cCCHHHHHH-----------HHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecC
Q 009601 285 DKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (531)
Q Consensus 285 d~~-------------i~~~~~l~~-----------~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~ 340 (531)
+++ +++++++.+ +++.+++.|+||||++++|+++++++|.++ ++++|+
T Consensus 235 ~~~Le~~k~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~l~~~------gI~~v~-- 306 (517)
T cd03343 235 DAPLEVKKTEIDAKIRITSPDQLQAFLEQEEAMLKEMVDKIADTGANVVFCQKGIDDLAQHYLAKA------GILAVR-- 306 (517)
T ss_pred eccccCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHC------CcEEEE--
Confidence 998 477776655 455899999999999999999999999754 456776
Q ss_pred CcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 009601 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (531)
Q Consensus 341 ~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~ 417 (531)
++++++|+|||++|||++++ ++++++++.||+|++|++. +++++++++|+++
T Consensus 307 ---~v~~~~l~~Ia~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~----------------- 361 (517)
T cd03343 307 ---RVKKSDMEKLARATGAKIVT-----NIDDLTPEDLGEAELVEERKVGDDKMVFVEGCKNP----------------- 361 (517)
T ss_pred ---eCCHHHHHHHHHHhCCEEec-----chhhCChhhCCccceEEEEEECCeEEEEEEcCCCC-----------------
Confidence 56699999999999999998 5888999999999999864 7899999988763
Q ss_pred hhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCC
Q 009601 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDN 496 (531)
Q Consensus 418 ~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~ 496 (531)
..+||+|||+|+.+++|++|+++||++++|+++++| ||||||++||+++..|++++.+.++
T Consensus 362 ------------------~~~TI~lrG~t~~~l~e~~~~l~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~L~~~~~~~~~ 423 (517)
T cd03343 362 ------------------KAVTILLRGGTEHVVDELERALEDALRVVADALEDGKVVAGGGAVEIELAKRLREYARSVGG 423 (517)
T ss_pred ------------------ceEEEEEECCcHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCHHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999999999 9999999999999999998877878
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 497 DEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 497 ~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
.+| +++++|++||+.||++|++|||+|+.+++.
T Consensus 424 ~~~-~~~~~~~~aL~~ip~~L~~NaG~d~~~~~~ 456 (517)
T cd03343 424 REQ-LAVEAFADALEEIPRTLAENAGLDPIDTLV 456 (517)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 777 899999999999999999999999998875
No 15
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=8.2e-81 Score=675.69 Aligned_cols=389 Identities=24% Similarity=0.381 Sum_probs=356.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.+++..|+.+|..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+ ++|++++|++||+++||||
T Consensus 11 ~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----a~l~~~~a~~qd~~~GDGT 86 (484)
T cd03342 11 GQALAVNISAAKGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLSEMQIQHPT----ASMIARAATAQDDITGDGT 86 (484)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCceEEECCCCCEEEeccHHHHHHhccCcCHH----HHHHHHHHHHhhhHhCCCh
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC---ch-hhHHhhhhccCCh------hhHhH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE---DS-ELADVAAVSAGNN------YEVGN 221 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~---~~-~l~~va~ts~~~~------~~l~~ 221 (531)
||++||+++||+++.+++++|+||..|++||++|.+.+++.|++++++++ +. .+.+||++|++++ +.|++
T Consensus 87 Tt~vvLa~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~l~~va~ts~~sk~~~~~~~~l~~ 166 (484)
T cd03342 87 TSNVLLIGELLKQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVPVEIDTDRELLLSVARTSLRTKLHADLADQLTE 166 (484)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhCcccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 44 8999999999864 89999
Q ss_pred HHHHHHHhhccCC-c-------eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHH
Q 009601 222 MIAEAMSKVGRKG-V-------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARD 293 (531)
Q Consensus 222 li~~A~~~v~~~g-~-------I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~ 293 (531)
++++|+..+++++ . |...+|+++.|+ ++++|++|+++|.+|+ |+++++||+|+++|++|+..+.
T Consensus 167 l~~~A~~~v~~~~~~~~~~~I~i~ki~ggs~~ds-~~i~G~~~~~~~~~~~-------m~~~~~n~~Ill~~~~le~~~~ 238 (484)
T cd03342 167 IVVDAVLAIYKPDEPIDLHMVEIMQMQHKSDSDT-KLIRGLVLDHGARHPD-------MPKRVENAYILTCNVSLEYEKT 238 (484)
T ss_pred HHHHHHHHHhhcCCccChhHeEEEEecCCChhhc-eEEeeEEEecCCCCCC-------CCccccCceEEEEeCCCCCCcc
Confidence 9999999998865 1 333589999999 9999999999999997 4677899999999999987654
Q ss_pred -HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccC
Q 009601 294 -LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDK 372 (531)
Q Consensus 294 -l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~ 372 (531)
+... .-.+||||+++|++.++++|..| +|+||+. +++++|+|||++|||++++ ++++
T Consensus 239 ~~~~~------~~~~lvi~~~~I~~~al~~l~~~------~I~av~~-----~~~~~l~~ia~~tGa~ii~-----~l~~ 296 (484)
T cd03342 239 EVNSG------FFYSVVINQKGIDPPSLDMLAKE------GILALRR-----AKRRNMERLTLACGGVAMN-----SVDD 296 (484)
T ss_pred ccCcE------EEEEEEEeCCCccHHHHHHHHHC------CCeEEEe-----CCHHHHHHHHHHhCCEEec-----cccc
Confidence 2211 12469999999999999999988 4788884 5689999999999999999 5889
Q ss_pred CCCCCCceeeEE---EEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHH
Q 009601 373 VGKEVLGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETE 449 (531)
Q Consensus 373 ~~~~~lG~~~~v---~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~ 449 (531)
+++++||+|++| ++++++++++++|+++ +++||+|||+|+.+
T Consensus 297 ~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~-----------------------------------~~~tI~lrg~t~~~ 341 (484)
T cd03342 297 LSPECLGYAGLVYERTLGEEKYTFIEGVKNP-----------------------------------KSCTILIKGPNDHT 341 (484)
T ss_pred CChhhCcccceEEEEEECCeEEEEEECCCCC-----------------------------------cEEEEEEeCCCHHH
Confidence 999999999999 5678899999988763 68999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Q 009601 450 LKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVV 528 (531)
Q Consensus 450 l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v 528 (531)
++|.||+++||++++++++++| +|||||++||+++.+|++++.+.++.+| +++++|++||+.||++|++|||+|+.++
T Consensus 342 l~E~er~l~DAl~~vk~~~~~~~~vpGGGa~e~~ls~~L~~~~~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~~ 420 (484)
T cd03342 342 ITQIKDAIRDGLRAVKNAIEDKCVVPGAGAFEVALYAHLKEFKKSVKGKAK-LGVQAFADALLVIPKTLAENSGLDVQET 420 (484)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 9999999999999999999999 9999999999999999999887778777 8999999999999999999999999988
Q ss_pred cc
Q 009601 529 SE 530 (531)
Q Consensus 529 ~~ 530 (531)
+.
T Consensus 421 l~ 422 (484)
T cd03342 421 LV 422 (484)
T ss_pred HH
Confidence 75
No 16
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=3.1e-80 Score=678.22 Aligned_cols=400 Identities=25% Similarity=0.345 Sum_probs=361.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.++++.|++||..|+++|+|||||+||+|||+++.|+++|||||+||+++|+++||+ |+|++++|++||+++||||
T Consensus 7 ~~~~~~ni~a~~~l~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~q~~~~GDGT 82 (527)
T cd03335 7 QDVRTQNVTAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDKEVGDGT 82 (527)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeCcHHHHHHhccccChH----HHHHHHHHHHHHHHhCCCc
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHh-cccccC--ch-hhHHhhhhccC------ChhhHhH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVE--DS-ELADVAAVSAG------NNYEVGN 221 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~-~s~~v~--~~-~l~~va~ts~~------~~~~l~~ 221 (531)
||+|||+++||+++.+++++|+||+.|++||++|.+.++++|++ ++++++ +. .|.++|+|+++ +.+.|++
T Consensus 83 Tt~vvLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~ 162 (527)
T cd03335 83 TSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVDNLGKESLINVAKTSMSSKIIGADSDFFAN 162 (527)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhcccccchhHHHHHH
Confidence 99999999999999999999999999999999999999999996 899987 44 79999999976 2489999
Q ss_pred HHHHHHHhhcc---CCc---------eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccC
Q 009601 222 MIAEAMSKVGR---KGV---------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (531)
Q Consensus 222 li~~A~~~v~~---~g~---------I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~ 289 (531)
++++|+..++. +|. |...+|++++|+ ++++|++|+++|.+| +|++.++||+|++++++|+
T Consensus 163 l~~~A~~~v~~~~~~~~~~~~~~~I~i~~~~Ggs~~~s-~li~Givi~~~~~~~-------~m~~~i~n~kIlll~~~Le 234 (527)
T cd03335 163 MVVDAILAVKTTNEKGKTKYPIKAVNILKAHGKSAKES-YLVNGYALNCTRASQ-------GMPTRVKNAKIACLDFNLQ 234 (527)
T ss_pred HHHHHHHHhhcccccCCCccCHHHeEEEEecCcChhhc-ceeeeEEEecccCCC-------CCcccccCCcEEEEeccCC
Confidence 99999999952 232 234689999999 999999999999887 4788899999999999875
Q ss_pred C-------------HHH-----------HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCcc
Q 009601 290 N-------------ARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (531)
Q Consensus 290 ~-------------~~~-----------l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~ 345 (531)
. +.+ +.++++.+.+.|+||||++++|+++++++|..+ +|++++ ++
T Consensus 235 ~~~~~~~~~~~~~~~~~le~~~~~E~~~l~~~i~~i~~~g~~lvi~~k~I~d~al~~L~~~------~I~~v~-----~v 303 (527)
T cd03335 235 KTKMKLGVQVVVTDPEKLEKIRQRESDITKERIKKILAAGANVVLTTGGIDDMCLKYFVEA------GAMAVR-----RV 303 (527)
T ss_pred CCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHC------CcEEEE-----eC
Confidence 3 222 346788889999999999999999999999887 467666 66
Q ss_pred ccchHHHHHHHhCCeEEecCCCcc-ccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHH
Q 009601 346 KSQYLDDIAILTGGTVIRDEVGLA-LDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (531)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~-l~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~ 421 (531)
++++|+|||++|||+++++..+++ .+++++++||+|++|+ ++++++++|.+|++
T Consensus 304 ~~~~lerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~~~---------------------- 361 (527)
T cd03335 304 KKEDLRRIAKATGATLVSTLANLEGEETFDPSYLGEAEEVVQERIGDDELILIKGTKK---------------------- 361 (527)
T ss_pred CHHHHHHHHHHhCCEEecChhhcCcccccCHhhCccCceEEEEEECCeEEEEEEcCCC----------------------
Confidence 789999999999999999654432 2455677899999998 67889999998875
Q ss_pred HHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHH
Q 009601 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (531)
Q Consensus 422 e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (531)
+++|||+|||+|+.+++|.+|+++||++++++++++| +|||||++||+++.+|++++.+.++.+|
T Consensus 362 -------------~~~~TIllrG~t~~~l~e~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~L~~~~~~~~~~~~- 427 (527)
T cd03335 362 -------------RSSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGSREQ- 427 (527)
T ss_pred -------------CCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhccCcHHH-
Confidence 4699999999999999999999999999999999999 9999999999999999999888878777
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 501 ~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+++++|++||+.||++||+|||+|+.+++.
T Consensus 428 ~~i~~~a~aL~~ip~~La~NaG~d~~~~~~ 457 (527)
T cd03335 428 LAIAEFAEALLVIPKTLAVNAAKDATELVA 457 (527)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 899999999999999999999999998865
No 17
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=7.2e-80 Score=674.08 Aligned_cols=395 Identities=23% Similarity=0.371 Sum_probs=358.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.+++..|+.+|..|+++|+|||||+||+|||+++.|+++|||||+||+++|+++||+ ++|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~vkttlGP~G~~Kmi~~~~G~~~ITnDG~TIlk~i~i~hP~----a~ll~~~a~~qd~~~GDGT 90 (531)
T TIGR02347 15 DAALMMNINAARGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLNEMQIQHPT----ASMIARAATAQDDITGDGT 90 (531)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccceEEEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHHhhhhhcCcH
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhccccc---Cch-hhHHhhhhccCC------hhhHhH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV---EDS-ELADVAAVSAGN------NYEVGN 221 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v---~~~-~l~~va~ts~~~------~~~l~~ 221 (531)
||+|||+++||+++.+++++|+||+.|++||+.|++.++++|+++++++ .+. .|.++|+|++++ +++|++
T Consensus 91 TtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~ 170 (531)
T TIGR02347 91 TSTVILIGELLKQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIKTEDEVDRELLLNVARTSLRTKLPIDLADQLTE 170 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhccccchhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999765 334 799999999864 789999
Q ss_pred HHHHHHHhhccCCc------eE--eecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCH--
Q 009601 222 MIAEAMSKVGRKGV------VT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA-- 291 (531)
Q Consensus 222 li~~A~~~v~~~g~------I~--v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~-- 291 (531)
++++|+..+++++. |. ...|++.+|+ ++++|++|+++|.+|+ |+.+++||+|+++|++|+..
T Consensus 171 iv~~Av~~v~~~~~~i~~~~I~i~k~~g~s~~ds-~~v~Giv~~~~~~~~~-------~~~~~~n~~Ill~~~~le~~~~ 242 (531)
T TIGR02347 171 IVVDAVLAIKKDGEQIDLFMVEIMEMKHKSATDT-TLIRGLVLDHGARHPD-------MPRRVKNAYILTCNVSLEYEKT 242 (531)
T ss_pred HHHHHHHHHhhcCCCCChhHeEEEEecCCCcccc-EEEeeEEEecCcCCCC-------CceeccCceEEEEeCCCCCCcc
Confidence 99999999988653 33 2578999999 9999999999999997 46688999999999986432
Q ss_pred -----------HH-----------HHHHHHHHHhcCC-------C---EEEEeccchHHHHHHHHHHhhcccceEEEeec
Q 009601 292 -----------RD-----------LINVLEDAIRGAY-------P---ILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (531)
Q Consensus 292 -----------~~-----------l~~~le~i~~~g~-------~---lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~ 339 (531)
++ +...++++++.|. + +|+++++|++.++++|.++ +|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I~~~a~~~L~~~------~I~~i~- 315 (531)
T TIGR02347 243 EVNSGFFYSNAEQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGIDPPSLDLLAKE------GIMALR- 315 (531)
T ss_pred ccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCccHHHHHHHHHC------CceEEc-
Confidence 22 3445677777551 4 8999999999999999886 567776
Q ss_pred CCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEE---EEeCceEEEEcCCCChhhHHHHHHHHHHHHHh
Q 009601 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (531)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v---~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~ 416 (531)
++++++|+|||++|||++++ +++++++++||+|++| .++++++++|++|+++
T Consensus 316 ----rv~~~~le~ia~~tGa~~i~-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~---------------- 370 (531)
T TIGR02347 316 ----RAKRRNMERLTLACGGEALN-----SVEDLTPECLGWAGLVYETSIGEEKYTFIEEVKNP---------------- 370 (531)
T ss_pred ----cCCHHHHHHHHHHhCCEEec-----ccccCCccccccceEEEEEEECCeEEEEEEcCCCC----------------
Confidence 45689999999999999998 6889999999999999 5778899999988763
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCC
Q 009601 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (531)
Q Consensus 417 ~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~ 495 (531)
++|||+|||+|+.+++|++|+++||++++++++++| +|||||++|++++.+|++++.+.+
T Consensus 371 -------------------~~~TI~lrG~t~~~l~E~er~l~DAl~v~~~~~~~~~vvpGGGa~E~~ls~~l~~~~~~~~ 431 (531)
T TIGR02347 371 -------------------KSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIEDKCVVPGAGAFEIAAYCHLKEEKKSVK 431 (531)
T ss_pred -------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhcCC
Confidence 589999999999999999999999999999999999 999999999999999999987788
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 496 ~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+.+| +++++|++||+.||++|++|||+|+.+++.
T Consensus 432 ~~~~-~~i~~fa~ALe~ip~~La~NaG~d~~~vl~ 465 (531)
T TIGR02347 432 GKAK-LGVEAFANALLVIPKTLAENSGLDAQDTLV 465 (531)
T ss_pred CHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 8877 899999999999999999999999998875
No 18
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.2e-79 Score=673.53 Aligned_cols=400 Identities=24% Similarity=0.348 Sum_probs=362.0
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcc
Q 009601 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (531)
Q Consensus 65 ~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd 144 (531)
+..|+ .++++.|++||..|+++++|||||+||+|||+++.|+++|||||+||+|+|+++||+ |+|++++|++||
T Consensus 17 ~~~~~--~~~~~~ni~~~~~i~~~v~tslGP~G~~kmi~~~~G~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~q~ 90 (526)
T cd03339 17 KRLKG--LEAHKSHILAAKSVANILRTSLGPRGMDKILVSPDGEVTVTNDGATILEKMDVDHQI----AKLLVELSKSQD 90 (526)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEECCCCCEEEeCcHHHHHHHhcccCHH----HHHHHHHHHhhh
Confidence 47777 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc----h-hhHHhhhhccCC----
Q 009601 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN---- 215 (531)
Q Consensus 145 ~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~----~-~l~~va~ts~~~---- 215 (531)
+++||||||+|+|+++||+++.+++++|+||..|++||+.|.+.+++.|++++++++. . .|.++|+|++++
T Consensus 91 ~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~ 170 (526)
T cd03339 91 DEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADKIEFSPDNKEPLIQTAMTSLGSKIVS 170 (526)
T ss_pred hhhcCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCcccHHHHHHHHHHhhcccchh
Confidence 9999999999999999999999999999999999999999999999999999998862 3 799999998864
Q ss_pred --hhhHhHHHHHHHHhhccC-------Cc--eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009601 216 --NYEVGNMIAEAMSKVGRK-------GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (531)
Q Consensus 216 --~~~l~~li~~A~~~v~~~-------g~--I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~ 284 (531)
.+.|++++++|+..+.+. .. |...+|++++|| ++++|++|+++|.+|+| +..++||||+++
T Consensus 171 ~~~~~~s~i~v~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS-~~v~Givi~~~~~~~~m-------~~~~~n~kI~ll 242 (526)
T cd03339 171 RCHRQFAEIAVDAVLSVADLERKDVNFELIKVEGKVGGRLEDT-KLVKGIVIDKDFSHPQM-------PKEVKDAKIAIL 242 (526)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCccchHHeEEEEecCcCHHHc-ceeeeEEEecccCCCCC-------CceecCCCEEEE
Confidence 478999999999988541 12 344699999999 99999999999999975 455678888888
Q ss_pred ccc-------------cCCHHH-----------HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecC
Q 009601 285 DKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (531)
Q Consensus 285 d~~-------------i~~~~~-----------l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~ 340 (531)
+++ ++++++ +.++++.+++.|+||||++++|+++++++|.+|+ +.||+.+
T Consensus 243 ~~~le~~~~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~~v 316 (526)
T cd03339 243 TCPFEPPKPKTKHKLDITSVEDYKKLQEYEQKYFREMVEQVKDAGANLVICQWGFDDEANHLLLQNG------LPAVRWV 316 (526)
T ss_pred EecccCCccccceEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCHHHHHHHHHCC------CEEEEeC
Confidence 865 355555 5677999999999999999999999999998874 5678754
Q ss_pred CcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---e--CceEEEEcCCCChhhHHHHHHHHHHHHH
Q 009601 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---T--KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (531)
Q Consensus 341 ~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~--~~~~~~~~g~~~~~~i~~ri~~l~~~l~ 415 (531)
++++|+|||++|||++++ ++++++++.||+|+.|+. + +++++++++|+++
T Consensus 317 -----~~~~LerIa~~tGa~ii~-----~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~i~g~~~~--------------- 371 (526)
T cd03339 317 -----GGVEIELIAIATGGRIVP-----RFEDLSPEKLGKAGLVREISFGTTKDKMLVIEGCPNS--------------- 371 (526)
T ss_pred -----CHHHHHHHHHHhCCEEec-----chhhCChhhcccCceEEEEEecCCCcEEEEEECCCCC---------------
Confidence 478899999999999998 588999999999999973 3 4688999988763
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccC
Q 009601 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (531)
Q Consensus 416 ~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (531)
+.+||+|||+|+.+++|.||+++||++++++++++| +|||||++||+++..|++++.++
T Consensus 372 --------------------~~~TIllrG~t~~~l~E~er~l~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~ 431 (526)
T cd03339 372 --------------------KAVTIFIRGGNKMIIEEAKRSLHDALCVVRNLIRDNRIVYGGGAAEISCSLAVEKAADKC 431 (526)
T ss_pred --------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhhCCCEEeCCCHHHHHHHHHHHHHhccC
Confidence 689999999999999999999999999999999999 99999999999999999998778
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++.+| +++++|++||+.||++|++|||+|+.+++.
T Consensus 432 ~~~~~-~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~ 466 (526)
T cd03339 432 SGIEQ-YAMRAFADALESIPLALAENSGLNPIETLS 466 (526)
T ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 88776 899999999999999999999999998875
No 19
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.2e-79 Score=674.53 Aligned_cols=400 Identities=24% Similarity=0.340 Sum_probs=361.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.++++.|++||..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 11 ~~~~~~ni~~~~~l~~~vkttlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~qd~~~GDGT 86 (536)
T TIGR02340 11 QDVRTQNVTAAMAIANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDREVGDGT 86 (536)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeccHHHHHHHhcccChH----HHHHHHHHHHHHHHhCCCh
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhc-ccccC--ch-hhHHhhhhccC------ChhhHhH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQM-SKEVE--DS-ELADVAAVSAG------NNYEVGN 221 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~-s~~v~--~~-~l~~va~ts~~------~~~~l~~ 221 (531)
||+|||+++||+++.+++++|+||+.|++||+.|.+.++++|+++ +++++ +. .+.++|+|+++ +++.|++
T Consensus 87 Tt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~ 166 (536)
T TIGR02340 87 TSVVIIAAELLKRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSVSVDELGREALINVAKTSMSSKIIGLDSDFFSN 166 (536)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHHHHHHhccccchhhHHHHHH
Confidence 999999999999999999999999999999999999999999974 88887 44 89999999987 5789999
Q ss_pred HHHHHHHhhc---cCCc-------e--EeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccC
Q 009601 222 MIAEAMSKVG---RKGV-------V--TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (531)
Q Consensus 222 li~~A~~~v~---~~g~-------I--~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~ 289 (531)
++++|+..++ .+|. | ...+|++++|+ ++++|++|+++|.+| +|+.+++||+|++++++|+
T Consensus 167 l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~G~s~~~s-~~i~Gi~i~~~~~~~-------~m~~~~~n~kIli~~~~L~ 238 (536)
T TIGR02340 167 IVVDAVLAVKMTNENGETKYPIKAVNILKAHGGSARES-YLVKGYALNCTRASQ-------QMPKRIKKAKIACLDFNLQ 238 (536)
T ss_pred HHHHHHHHHhcccccCccccchHHeEEEEecCCCcccc-EEEEEEEEecccCCC-------CCcceecCCcEEEEecCCC
Confidence 9999999996 2342 2 23699999888 999999999999887 4788899999999999874
Q ss_pred CHH------------------------HHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCcc
Q 009601 290 NAR------------------------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (531)
Q Consensus 290 ~~~------------------------~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~ 345 (531)
..+ .+.+.++.+++.|++|||++++|++.++++|.++ ++++++ ++
T Consensus 239 ~~~~~~~~~~~~~~~~~le~~~~~E~~~i~~~i~~I~~~g~~lvi~~k~I~~~a~~~L~k~------~I~~i~-----rv 307 (536)
T TIGR02340 239 KQKMALGVQIVVDDPAKLEGIRQREADITKERIKKILKAGANVVLTTGGIDDMCLKYFVEA------GAMGVR-----RC 307 (536)
T ss_pred CCcccCceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHC------CcEEEe-----cC
Confidence 332 1235678888999999999999999999999887 456666 56
Q ss_pred ccchHHHHHHHhCCeEEecCCCc-cccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHH
Q 009601 346 KSQYLDDIAILTGGTVIRDEVGL-ALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (531)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~-~l~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~ 421 (531)
++++|+|||++|||+++++..++ ..+++++++||+|+.|+ ++++++++|++|+++
T Consensus 308 ~~~~LerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~--------------------- 366 (536)
T TIGR02340 308 KKEDLKRIAKATGGTLVSTLADLEGEETFDASYLGFADEVVEERIADDECILIKGTKGR--------------------- 366 (536)
T ss_pred CHHHHHHHHHHhCCEEecchhhcCccccccccccccCceEEEEEECCeEEEEEEcCCCC---------------------
Confidence 68999999999999999975544 23456778899999999 788899999988763
Q ss_pred HHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHH
Q 009601 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (531)
Q Consensus 422 e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (531)
.+|||+|||+|+.+++|++|+++||++++++++++| +|||||++||+++..|++++.+.++.+|
T Consensus 367 --------------~~~TIlirG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vVpGGGa~e~~ls~~l~~~~~~~~~~~~- 431 (536)
T TIGR02340 367 --------------KSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGSREQ- 431 (536)
T ss_pred --------------CEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhcCCCEEECCCHHHHHHHHHHHHHhhhCCChhH-
Confidence 589999999999999999999999999999999999 9999999999999999998777777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 501 ~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+++++|++||+.||++|++|||+|+.+++.
T Consensus 432 ~~~~~fa~AL~~ip~~La~NaG~d~~~~l~ 461 (536)
T TIGR02340 432 LAIAEFAEALLIIPKVLAVNAALDSTELVA 461 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 899999999999999999999999998864
No 20
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-81 Score=678.19 Aligned_cols=438 Identities=46% Similarity=0.668 Sum_probs=393.3
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 62 ~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
++++..|+ .++|..|+.|++.|+++|++||||+||||||+++.|+|+|||||+||||+|+++||. |+|++++|.
T Consensus 2 ~~~~~~~~--~~a~~~~~~~~~~la~~vkttLGPkG~~k~l~~~~g~~~iTnDG~tIlkeielehp~----akll~eva~ 75 (524)
T COG0459 2 MGKERKFG--EDARRSNIRAARALADAVKTTLGPKGRNKMLVDSGGDITITNDGVTILKEIELEHPG----AKLLVEVAK 75 (524)
T ss_pred Cccccccc--HHHHHHHHHHHHHHHHHHHhccCCCcCceEEecCCCCEEEecCcceehhhhhccCch----hHHHHHHHH
Confidence 47889999 999999999999999999999999999999999977999999999999999999997 999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch--hhHHhhhh-----ccC
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS--ELADVAAV-----SAG 214 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~--~l~~va~t-----s~~ 214 (531)
+||+++||||||+|||+++||+++.+++++|+||+.|++||++|.+.++++|+++++++++. +. +++.+ +++
T Consensus 76 ~qd~e~GDGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~~~~~~~-~~~~t~v~sk~~~ 154 (524)
T COG0459 76 KQDDEAGDGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVSDSEEEL-KIAITSVASKSAN 154 (524)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhh-hhhhheeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999865 22 44444 445
Q ss_pred ChhhHhHHHHHHHHhhcc-----CCceEee-cCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeecccc
Q 009601 215 NNYEVGNMIAEAMSKVGR-----KGVVTLE-EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI 288 (531)
Q Consensus 215 ~~~~l~~li~~A~~~v~~-----~g~I~v~-~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i 288 (531)
++++|++++++|+.+++. ++++.++ .|++.+|+ ++++||+||+||.+|||.++ +.++||+|+++|++|
T Consensus 155 ~~~~i~~lv~~Av~~v~~~~~d~~~i~~vk~~gg~~~e~-~vveG~~~dkg~~s~~~~~~-----~~~e~~~Ili~d~~l 228 (524)
T COG0459 155 SDEEIGELVVEAVEKVGKEQSDLDGIIIVKESGGSETEL-EVVEGMVFDKGYLSPYFMPD-----KRLENPKILLLDKKL 228 (524)
T ss_pred ChHHHHHHHHHHHHHhcccccccCCeEEEEecCCCccce-EEEeeEEecCCccCCCCCCc-----cccccceEEEEcccc
Confidence 568999999999999998 7776664 66666666 99999999999999997543 678999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCc
Q 009601 289 TNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGL 368 (531)
Q Consensus 289 ~~~~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~ 368 (531)
+..++.++ ++...+.+.|+++++++++++++..++.|.+++.+++++|+.|+|+|.++++|+|++++|++++.+++.+
T Consensus 229 ~~~k~~l~-~e~~i~~~~~l~~i~e~ee~e~l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~Ilt~~~v~~~dl~- 306 (524)
T COG0459 229 EIKKPELP-LEIVISSGKPLLIIAEDEEGEALATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIAILTGRRVKKEDLG- 306 (524)
T ss_pred ccccccCc-ceeEecCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhcceecceecchhhH-
Confidence 99999888 8888888889999999999999999999999999999999999999999999999999999999998654
Q ss_pred cccCCCCCCCceeeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHhhcCCeEEEEeCCCCH
Q 009601 369 ALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENA-EQDYEREKLNERIAKLSGGVAVIQVGAQTE 447 (531)
Q Consensus 369 ~l~~~~~~~lG~~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~-~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~ 447 (531)
+ ....+|.|+.+...++.+....|.+. +.++++. .++|+++++++|.++ .+++|||+|||+|+
T Consensus 307 --~--~l~~~~ga~~v~~~~d~t~~~~G~~~-----------~~~ve~~~~~~~~~~~~~~~~~~-~~~~~tI~vrgate 370 (524)
T COG0459 307 --E--RLAKLGGAKIVSVLKDLTTIVLGEGA-----------AGLVEETKTGDYDMEKLQERKAK-AGGVATILVRGATE 370 (524)
T ss_pred --H--HHHHccCceEEeecccCceeecCccc-----------cceEEEeeccchhhhhhhhhhhc-CCCeEEEEECCccH
Confidence 1 45678889999888777766665430 2334444 688999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Q 009601 448 TELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGS 526 (531)
Q Consensus 448 ~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~ 526 (531)
.+++|++|+++|||+++++++++| +|||||++|++++..|++++.+.++.+|++++++|++||+.||++|++|||+||.
T Consensus 371 ~~ldE~er~i~DAL~~~~~ave~g~iV~GGGa~e~~~a~~L~~~~~~~~g~~e~~~i~~~a~Ale~ip~~La~NaG~d~~ 450 (524)
T COG0459 371 VELDEKERRIEDALNVVRAAVEEGKIVPGGGAAEIEAALRLREYAMTVEGGDEQLGIEAFARALEAPPRQLAENAGLDPI 450 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCeEeCCCHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 999999999999999999999999 9999999999999999998544545345599999999999999999999999999
Q ss_pred cccc
Q 009601 527 VVSE 530 (531)
Q Consensus 527 ~v~~ 530 (531)
+++.
T Consensus 451 ~v~~ 454 (524)
T COG0459 451 EVLS 454 (524)
T ss_pred HHHH
Confidence 9875
No 21
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.8e-79 Score=670.99 Aligned_cols=402 Identities=23% Similarity=0.314 Sum_probs=360.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.++++.|+.+|..|+++|+|||||+||||||++++|+++|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 7 ~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hp~----a~ll~~~a~~q~~~~GDGT 82 (515)
T cd03338 7 ADVRLSNIQAAKAVADAIRTSLGPRGMDKMIQTGKGEVIITNDGATILKQMSVLHPA----AKMLVELSKAQDIEAGDGT 82 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeeCCCCCEEEECcHHHHHHhCcCcCHH----HHHHHHHHHHHHhHhcCCc
Confidence 568899999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-hhHHhhhhccC------ChhhHhHH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAG------NNYEVGNM 222 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~------~~~~l~~l 222 (531)
||+|+|+++||+++.++++.|+||..|++||++|.+.++++|++++++++ +. .|.++|+||++ ++++|+++
T Consensus 83 tt~vvLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~~~~l~~va~ts~~sK~~~~~~~~ls~l 162 (515)
T cd03338 83 TSVVVLAGALLSACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIPVDLNDRESLIKSATTSLNSKVVSQYSSLLAPI 162 (515)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHhccccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999886 44 89999999998 56889999
Q ss_pred HHHHHHhhccCCc----------eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeecccc----
Q 009601 223 IAEAMSKVGRKGV----------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI---- 288 (531)
Q Consensus 223 i~~A~~~v~~~g~----------I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i---- 288 (531)
+++|+.++++++. |.+++|++++|+ ++++|++|+++|.+|++ +|..++||+++++++++
T Consensus 163 i~~A~~~v~~~~~~~~~d~~~i~i~~~~Ggs~~ds-~lv~Giv~~k~~~~~~~------~p~~i~n~ki~ll~~~le~~~ 235 (515)
T cd03338 163 AVDAVLKVIDPATATNVDLKDIRIVKKLGGTIEDT-ELVDGLVFTQKASKKAG------GPTRIEKAKIGLIQFCLSPPK 235 (515)
T ss_pred HHHHHHHhhcccccCcCCHHHeEEEEecCCChhhc-eeeeeEEEeccccCcCC------CCccccCCcEEEEeccccccc
Confidence 9999999998763 555789999999 99999999999999752 35567889998887764
Q ss_pred ---------CCH-----------HHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccc
Q 009601 289 ---------TNA-----------RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (531)
Q Consensus 289 ---------~~~-----------~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~ 348 (531)
+++ +++.++++.+++.|+||||++++|++++++.+..+++++ .+|+||+ +++++
T Consensus 236 ~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~i~~~~v~~l~~~~l~~-~~I~av~-----~~~~~ 309 (515)
T cd03338 236 TDMDNNIVVNDYAQMDRILREERKYILNMCKKIKKSGCNVLLIQKSILRDAVSDLALHFLAK-LKIMVVK-----DIERE 309 (515)
T ss_pred cccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHHH-CCceEEe-----cCCHH
Confidence 232 345678999999999999999999544444444444443 4789888 66799
Q ss_pred hHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHH
Q 009601 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREK 425 (531)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~ 425 (531)
+|+|||++|||++++ +++++++++||+|+.|++. +++++++.+|..
T Consensus 310 ~LerIa~~tGa~ii~-----sl~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~-------------------------- 358 (515)
T cd03338 310 EIEFICKTIGCKPVA-----SIDHFTEDKLGSADLVEEVSLGDGKIVKITGVKN-------------------------- 358 (515)
T ss_pred HHHHHHHHHCCEEec-----ccccCCHhhCCCCceEEEEEECCeEEEEEEecCC--------------------------
Confidence 999999999999999 5888999999999999863 567888988754
Q ss_pred HHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHH
Q 009601 426 LNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 504 (531)
Q Consensus 426 l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~ 504 (531)
++++|||+|||+|+.+++|++|+++||++++++++++| +|||||++||+++.+|++++.+.++.+| ++++
T Consensus 359 --------~~~~~TIllrG~t~~~l~e~~r~i~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~~-~~~~ 429 (515)
T cd03338 359 --------PGKTVTILVRGSNKLVLDEAERSLHDALCVIRCLVKKRALIPGGGAPEIEIALQLSEWARTLTGVEQ-YCVR 429 (515)
T ss_pred --------CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECCCHHHHHHHHHHHHHhccCCcHHH-HHHH
Confidence 24799999999999999999999999999999999999 9999999999999999998877777777 8999
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 505 IVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 505 ~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+|++||+.||++|++|||+|+.+++.
T Consensus 430 ~~a~al~~ip~~L~~NaG~d~~~~~~ 455 (515)
T cd03338 430 AFADALEVIPYTLAENAGLNPISIVT 455 (515)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 99999999999999999999998875
No 22
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=4.7e-79 Score=668.62 Aligned_cols=395 Identities=24% Similarity=0.381 Sum_probs=357.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.++++.|++||..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 26 ~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~G~~~ITnDG~tIlk~l~~~hP~----akll~~~a~~qd~~~GDGT 101 (532)
T TIGR02343 26 LEAIKSNIAAAKSVASILRTSLGPKGMDKMLQSPDGDITVTNDGATILSQMDVDNPI----AKLMVELSKSQDDEIGDGT 101 (532)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCCCCEEEeCcHHHHHHHccCCCHH----HHHHHHHHHHHHHHhcCCc
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc----h-hhHHhhhhccCC------hhhHh
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN------NYEVG 220 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~----~-~l~~va~ts~~~------~~~l~ 220 (531)
||+|+|+++||+++.+++++|+||+.|++||+.|++.++++|+++++++++ . .|.++|+|+++. .+.|+
T Consensus 102 ttvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ls 181 (532)
T TIGR02343 102 TGVVVLAGALLEQAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEEISDDNNNKEPLIQAAKTSLGSKIVSKCHRRFA 181 (532)
T ss_pred ccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcCCCCHHHHHHHHHHhhccchhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999998753 3 799999998764 47799
Q ss_pred HHHHHHHHhhccC--C-----c--eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc----
Q 009601 221 NMIAEAMSKVGRK--G-----V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK---- 287 (531)
Q Consensus 221 ~li~~A~~~v~~~--g-----~--I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~---- 287 (531)
+++++|+..+.+. + . |...+|++++|+ ++++|++|+++|.+|+ |+..++||||++++++
T Consensus 182 ~i~~~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds-~~v~Gi~i~~~~~~~~-------m~~~~~n~kI~l~~~~le~~ 253 (532)
T TIGR02343 182 EIAVDAVLMVADMERRDVDFDLIKVEGKVGGSLEDT-KLIKGIIIDKDFSHPQ-------MPKEVKDAKIAILTCPFEPP 253 (532)
T ss_pred HHHHHHHHhhhhcCCCcCCHHHeeEEEecCCCcccc-eeEeeEEEecCcCCCC-------CCeeecCCcEEEEEeecccc
Confidence 9999999988541 1 2 334699999999 9999999999999987 4556778999988875
Q ss_pred ---------cCCHHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCcccc
Q 009601 288 ---------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (531)
Q Consensus 288 ---------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~ 347 (531)
+++++++ .++++++++.|+|||||+++|++.++++|..|+ +.+|+.+ ++
T Consensus 254 ~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~l~~i~~~g~~lvi~~~~I~~~al~~L~~~~------i~~v~~~-----~~ 322 (532)
T TIGR02343 254 KPKTKHKLDISSVEEYKKLQKYEQQKFAEMIDDIKKSGANIVICQWGFDDEANHLLLQND------LPAVRWV-----GG 322 (532)
T ss_pred ccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHHCC------cEEEEcC-----CH
Confidence 4566655 677999999999999999999999999999884 4667744 47
Q ss_pred chHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eC--ceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHH
Q 009601 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TK--DTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYE 422 (531)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~--~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e 422 (531)
++|+|||++|||++++ +++++++++||+|++|+. +. ++++++.+|+++
T Consensus 323 ~~l~~Ia~~tGa~~i~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~i~~~~~~---------------------- 375 (532)
T TIGR02343 323 HELELIAIATGGRIVP-----RFEELSEDKLGKAGLVREISFGTTKDRMLVIEQCKNS---------------------- 375 (532)
T ss_pred HHHHHHHHHhCCEEec-----ccccCCHhHCcccceEEEEEecCCcceEEEEECCCCC----------------------
Confidence 8899999999999999 588999999999999973 33 578999988763
Q ss_pred HHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHH
Q 009601 423 REKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKV 501 (531)
Q Consensus 423 ~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~ 501 (531)
.++||+|||+|+.+++|.||+++||+++++++++++ +|||||++||+++++|++++.++++.+| +
T Consensus 376 -------------~~~TIllrG~t~~~l~E~er~l~DAl~~v~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~ 441 (532)
T TIGR02343 376 -------------KAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLIKNSRIVYGGGAAEISCSLAVSQEADKYSGVEQ-Y 441 (532)
T ss_pred -------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhccCCcHHH-H
Confidence 589999999999999999999999999999999996 9999999999999999999888888887 8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 502 GADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 502 ~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++++|++||+.||++|++|||+|+.+++.
T Consensus 442 ~i~~fa~ALe~ip~~La~NaG~d~~~~l~ 470 (532)
T TIGR02343 442 AIRAFADALEEIPMALAENSGLDPIGTLS 470 (532)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 99999999999999999999999988764
No 23
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.2e-78 Score=665.37 Aligned_cols=398 Identities=21% Similarity=0.343 Sum_probs=363.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.+++..|+.+|..|+++|+|||||+||+|||+++.|+++|||||+||+++|+++||+ |+|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~i~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~q~~~~GDGT 90 (522)
T cd03340 15 KGQLISNINACQAIADAVRTTLGPRGMDKLIVDGRGKVTISNDGATILKLLDIVHPA----AKTLVDIAKSQDAEVGDGT 90 (522)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEEEcCCCCEEEeccHHHHHHHccccCHH----HHHHHHHHHHhHhHhCCCh
Confidence 679999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc------h-hhHHhhhhccC------Chhh
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED------S-ELADVAAVSAG------NNYE 218 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~------~-~l~~va~ts~~------~~~~ 218 (531)
||+|+|+++||+++.++++.|+||+.|++||++|.+.+++.|+++++++++ . .|.++|+|+++ ++++
T Consensus 91 tt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ 170 (522)
T cd03340 91 TSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEEQRELLEKCAATALNSKLIASEKEF 170 (522)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCcccccccHHHHHHHHHHHhccCcchhHHHH
Confidence 999999999999999999999999999999999999999999999998864 3 69999999876 5789
Q ss_pred HhHHHHHHHHhhccCC---c--eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeecccc-----
Q 009601 219 VGNMIAEAMSKVGRKG---V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI----- 288 (531)
Q Consensus 219 l~~li~~A~~~v~~~g---~--I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i----- 288 (531)
|++++++|+..+++++ . |...+|++++|+ ++++|++|+++|.+|+|.+ ++..++||+|+++++++
T Consensus 171 l~~l~~~A~~~v~~~~~~~~I~i~~i~Ggs~~ds-~lv~Giv~~k~~~~~~~~~----~~~~~~n~kIll~~~~Le~~~~ 245 (522)
T cd03340 171 FAKMVVDAVLSLDDDLDLDMIGIKKVPGGSLEDS-QLVNGVAFKKTFSYAGFEQ----QPKKFKNPKILLLNVELELKAE 245 (522)
T ss_pred HHHHHHHHHHHhcccCChhHheEeeecCCChhhc-eeeeeEEEecccCcccccc----CCccccCCeEEEEeCCCCCCcc
Confidence 9999999999998765 2 333589999999 8999999999999998754 56779999999999984
Q ss_pred --------CCHHH-----------HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccch
Q 009601 289 --------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (531)
Q Consensus 289 --------~~~~~-----------l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~ 349 (531)
+++.+ +.+.++.+++.|+++|+++++|++.++++|..+ +|++++ ++++++
T Consensus 246 ~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~vvl~~~~i~d~a~~~l~~~------~I~~~~-----~v~~~~ 314 (522)
T cd03340 246 KDNAEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSGANVVLSKLPIGDLATQYFADR------DIFCAG-----RVPEED 314 (522)
T ss_pred ccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcHHHHHHHHHC------CcEEEE-----eCCHHH
Confidence 44443 456788899999999999999999999999887 345665 556899
Q ss_pred HHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHH
Q 009601 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (531)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l 426 (531)
|++||++|||++++ +++++++++||+|+.|+ ++++++++|.+|..+
T Consensus 315 l~rIa~~tGa~ii~-----~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~-------------------------- 363 (522)
T cd03340 315 LKRVAQATGGSIQT-----TVSNITDDVLGTCGLFEERQVGGERYNIFTGCPKA-------------------------- 363 (522)
T ss_pred HHHHHHHHCCEEee-----ccccCCccccccceEEEEEEECCEEEEEEECCCCC--------------------------
Confidence 99999999999998 58889999999999998 567899999998652
Q ss_pred HHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHH
Q 009601 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (531)
Q Consensus 427 ~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (531)
..+||++||+|+.+++|.+|+++||++++++++++| ||||||++||+++.+|++++.+..+.+| +++++
T Consensus 364 ---------~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGG~~E~~ls~~l~~~~~~~~~~~~-~~~~~ 433 (522)
T cd03340 364 ---------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQQ-LVINA 433 (522)
T ss_pred ---------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHHH-HHHHH
Confidence 589999999999999999999999999999999998 9999999999999999999877778777 89999
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccc
Q 009601 506 VKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 506 ~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
|++||+.||++|++|||+|+.+++.
T Consensus 434 fa~aL~~ip~~La~NaG~d~~~~l~ 458 (522)
T cd03340 434 FAKALEIIPRQLCDNAGFDATDILN 458 (522)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 9999999999999999999998875
No 24
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=8.2e-79 Score=666.97 Aligned_cols=395 Identities=21% Similarity=0.291 Sum_probs=359.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.+++..|+.+|..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+ |+|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~----akll~~~a~~q~~~~GDGT 90 (525)
T TIGR02344 15 RKAQLSNIQAAKAVADIIRTTLGPRAMLKMLLDPMGGIVMTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGT 90 (525)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCceEEcCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHhhhhhccCCc
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-hhHHhhhhccCC------hhhHhHH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGN------NYEVGNM 222 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~~------~~~l~~l 222 (531)
||+|+|+++||+++.+++++|+||+.|++||+.|.+.++++|++++++++. . .|.++++|++++ ++.|+++
T Consensus 91 tt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l 170 (525)
T TIGR02344 91 TSVIILAGEMLSVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIPVDVNDDAAMLKLIQSCIGTKFVSRWSDLMCDL 170 (525)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998873 3 789999887653 6899999
Q ss_pred HHHHHHhhccCC-----------ceE--eecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccC
Q 009601 223 IAEAMSKVGRKG-----------VVT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (531)
Q Consensus 223 i~~A~~~v~~~g-----------~I~--v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~ 289 (531)
+++|+..+++++ .|+ ..+|++++|| ++++|++|++++.++ +|+.+++||+|++++++++
T Consensus 171 ~~~Ai~~v~~~~~~~~~~~d~~~~I~i~ki~Gg~~~dS-~lv~Gvvi~k~~~~~-------~m~~~~~n~kIlll~~~Le 242 (525)
T TIGR02344 171 ALDAVRTVKRDLGNGRKEIDIKRYAKVEKIPGGDIEDS-CVLKGVMINKDVTHP-------KMRRYIENPRIVLLDCPLE 242 (525)
T ss_pred HHHHHHHhhccccCCCCccChhhceEEEEecCCChHhc-CcccceEEecccCCC-------CCccccCCCCEEEEecccc
Confidence 999999998653 133 3579999998 899999999997765 4788899999999999875
Q ss_pred C-------------HHHHHHH-----------HHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCcc
Q 009601 290 N-------------ARDLINV-----------LEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (531)
Q Consensus 290 ~-------------~~~l~~~-----------le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~ 345 (531)
. ++++.++ ++++.+.|++|||+++.|++.++++|..+ +|+|++ ++
T Consensus 243 ~~~~~~~~~i~i~~~~~~~~~l~~E~~~l~~~v~~i~~~~~~vIi~~k~I~dla~~~l~~~------~I~av~-----~v 311 (525)
T TIGR02344 243 YKKGESQTNVEIMKEEDWNRILQMEEEYVQLMCEDIIAVKPDLVITEKGVSDLAQHYLLKA------NISAIR-----RV 311 (525)
T ss_pred cccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHC------CceEEe-----cC
Confidence 4 4565554 45888999999999999999999988775 567665 77
Q ss_pred ccchHHHHHHHhCCeEEecCCCccccCCCCCCCce-eeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHH
Q 009601 346 KSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (531)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~ 421 (531)
++++|+|||++|||++++ ++++++++.+|+ |+.|++ +++++++|++|+++
T Consensus 312 ~~~~LerIa~~tGa~ii~-----~l~~l~~~~lG~~~~~v~~~~ig~~~~~~~~g~~~~--------------------- 365 (525)
T TIGR02344 312 RKTDNNRIARACGATIVN-----RPEELRESDVGTGCGLFEVKKIGDEYFTFFTECKDP--------------------- 365 (525)
T ss_pred CHHHHHHHHHHhCCeEec-----chhhCCHhhcCCcCCEEEEEEECCeEEEEEEcCCCC---------------------
Confidence 799999999999999999 588899999999 998886 56889999988763
Q ss_pred HHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHH
Q 009601 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (531)
Q Consensus 422 e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (531)
.+|||+|||+|+.+++|.||+++||+++++++++++ +|||||++||++|.+|++++.+.++.+|
T Consensus 366 --------------~~~TIlLrG~t~~~l~E~er~l~DAl~~vk~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~- 430 (525)
T TIGR02344 366 --------------KACTILLRGASKDVLNEIERNLQDAMAVARNVLLEPKLLPGGGATEMAVSVYLAKKASKLEGVQQ- 430 (525)
T ss_pred --------------CEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHHhcCCCHHH-
Confidence 589999999999999999999999999999999997 9999999999999999998888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 501 ~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+++++|++||+.||++||+|||+|+.+++.
T Consensus 431 ~~~~~~a~al~~ip~~La~NaG~d~~~~l~ 460 (525)
T TIGR02344 431 WPYRAVADALEIIPRTLAQNCGVNVIRTLT 460 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 899999999999999999999999998875
No 25
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.3e-78 Score=663.62 Aligned_cols=402 Identities=22% Similarity=0.316 Sum_probs=356.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.+++..|+.+|..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~ia~~~kttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~~~a~~qd~~~GDGT 83 (517)
T TIGR02342 8 TDVRTSNIVAAKAVADAIRTSLGPRGMDKMIQSGNGEVIITNDGATILKQMGVIHPA----AKMLVELSKAQDIEAGDGT 83 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEEcCCCCEEEeCCHHHHHHhccccChH----HHHHHHHHHHHHHHhCCCc
Confidence 568899999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-hhHHhhhhccCC------hhhHhHH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN------NYEVGNM 222 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~------~~~l~~l 222 (531)
||+|+|+++||+++.+++++|+||+.|++||++|.+.++++|+++++|++ +. .|.++|+|++++ .+.|+++
T Consensus 84 tt~viLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~l 163 (517)
T TIGR02342 84 TSVVILAGALLGACETLLERGIHPTTISESFQIAADEAIKILDEMSIPVDLSDREILIKSATTSLSSKVVSQYSSLLAPL 163 (517)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCccCHHHHHHHHHHHhccccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999886 44 799999998863 4678999
Q ss_pred HHHHHHhhccC---Cc-----eE--eecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccC---
Q 009601 223 IAEAMSKVGRK---GV-----VT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (531)
Q Consensus 223 i~~A~~~v~~~---g~-----I~--v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~--- 289 (531)
+++|+..++++ +. |. ...|++++|+ ++++|++|+++|.++ .+|+..++||+|++++++++
T Consensus 164 ~~~a~~~v~~~~~~~~~~~~~i~i~k~~Ggs~~ds-~li~Givl~k~~~~~------~~mpk~i~n~kI~ll~~~Le~~~ 236 (517)
T TIGR02342 164 AVDAVLKVIDPENDKNVDLNDIKVVKKLGGTIDDT-ELIEGLVFTQKASRS------AGGPTRIEKAKIGLIQFQISPPK 236 (517)
T ss_pred HHHHHHHHhccccCCccCHHHeeEEeccCCChhhc-EEEeeEEEecccccc------CCCCccccCCcEEEEecCCCCCc
Confidence 99999999762 32 22 3489999999 999999999999874 24777789999999988642
Q ss_pred ----------CH-----------HHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccc
Q 009601 290 ----------NA-----------RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (531)
Q Consensus 290 ----------~~-----------~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~ 348 (531)
++ +++.++++.+++.|+|||||+++|++++++.+..|.+.+ .+|+||+ +++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~lvi~~~~I~~~~l~~l~~~~l~~-~~I~av~-----~v~~~ 310 (517)
T TIGR02342 237 TDMENQVIVNDYAQMDRVLKEERKYILNIVKKIKKTGCNVLLIQKSILRDAVNDLALHFLAK-MKIMVVK-----DIERE 310 (517)
T ss_pred ccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHhh-CCceEEe-----cCCHH
Confidence 32 245678999999999999999999544444444444443 4789888 66799
Q ss_pred hHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEE-E--eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHH
Q 009601 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV-L--TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREK 425 (531)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~-i--~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~ 425 (531)
+|+|||++|||++++ +++++++++||+|+.|+ + +++.++++.+++.
T Consensus 311 ~LerIa~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~-------------------------- 359 (517)
T TIGR02342 311 EVEFICKTIGCKPIA-----SIDHFTADKLGSAELVEEVTTDGGKIIKITGIQN-------------------------- 359 (517)
T ss_pred HHHHHHHHHCCEEEc-----chhhcCcccCcCCceEEEEEECCeEEEEEEccCC--------------------------
Confidence 999999999999999 58889999999999998 3 4567788887754
Q ss_pred HHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHH
Q 009601 426 LNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 504 (531)
Q Consensus 426 l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~ 504 (531)
+++++||+|||+|+.+++|.+|+++||+++++++++++ +|||||++||++|.+|++++.+.++.+| ++++
T Consensus 360 --------~~~~~tIllrG~t~~~l~E~er~i~DAl~~v~~~~~~~~~VpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i~ 430 (517)
T TIGR02342 360 --------AGKTVTVLLRGSNKLVIDEAERSLHDALCVIRSLVKKRGLIPGGGAPEIEIAIKLSKLARTMKGVES-YCVR 430 (517)
T ss_pred --------CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECcCHHHHHHHHHHHHHHhcCCcHHH-HHHH
Confidence 25799999999999999999999999999999999986 9999999999999999999887888877 8999
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 505 IVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 505 ~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+|++||+.||++|++|||+|+.+++.
T Consensus 431 ~~a~al~~ip~~La~NaG~d~~~~l~ 456 (517)
T TIGR02342 431 AFADALEVIPYTLAENAGLNPIDVVT 456 (517)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 99999999999999999999998875
No 26
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=6.2e-78 Score=658.36 Aligned_cols=394 Identities=23% Similarity=0.341 Sum_probs=357.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecC--CCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCC
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK--YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~--~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GD 149 (531)
+++++.|+.||..|+++|+|||||+||+|||+++ +|+++|||||+||+|+|+++||. |+|++++|++||+++||
T Consensus 12 ~~a~~~n~~~~~~i~~~v~tslGP~G~~Kmi~~~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~qd~~~GD 87 (517)
T cd03336 12 ETARLSSFVGAIAIGDLVKTTLGPKGMDKILQSVGRSGGVTVTNDGATILKSIGVDNPA----AKVLVDISKVQDDEVGD 87 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEeecCCCCCCeEEeccHHHHHHHccCcChH----HHHHHHHHHHHHhHhCC
Confidence 7899999999999999999999999999999998 59999999999999999999997 99999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc-----h-hhHHhhhhccC------Chh
Q 009601 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG------NNY 217 (531)
Q Consensus 150 GTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~------~~~ 217 (531)
||||+|||+++||+++.+++++|+||+.|++||++|.+.++++|+++++++++ . .|.++|+|+++ +++
T Consensus 88 GTTtvvvLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~t~lssk~~~~~~~ 167 (517)
T cd03336 88 GTTSVTVLAAELLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVDHSSDEEAFREDLLNIARTTLSSKILTQDKE 167 (517)
T ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcccccchhHHHHHHHHHhhccccccchhHH
Confidence 99999999999999999999999999999999999999999999999998841 2 78999998764 368
Q ss_pred hHhHHHHHHHHhhccC---Cc--eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccC---
Q 009601 218 EVGNMIAEAMSKVGRK---GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (531)
Q Consensus 218 ~l~~li~~A~~~v~~~---g~--I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~--- 289 (531)
+|++++++|+..+++. .. |...+|++++|+ ++++|+++++++.++ |++.++||+|+++|++|+
T Consensus 168 ~l~~l~~~A~~~v~~~~~~~~i~i~ki~G~s~~ds-~l~~G~v~~~~~~~~--------~~~~~~n~kIli~~~~le~~~ 238 (517)
T cd03336 168 HFAELAVDAVLRLKGSGNLDAIQIIKKLGGSLKDS-YLDEGFLLDKKIGVN--------QPKRIENAKILIANTPMDTDK 238 (517)
T ss_pred HHHHHHHHHHHHhhccCCccceeEEEccCCCccce-EEEeeEEEecccCCC--------CCCeeccccEEEEecCCCccc
Confidence 8999999999999642 22 344689999999 899999999986432 577899999999999764
Q ss_pred -----------CHHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCcccc
Q 009601 290 -----------NARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (531)
Q Consensus 290 -----------~~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~ 347 (531)
+++++ .+.++.+++.|++++++++.|++.++++|..+ +|++|+.|+ +
T Consensus 239 ~~~~~~~~~~~~~~~~~~l~~~E~~~~~~~v~~I~~~gv~~v~~~~~I~~~~~~~l~~~------~I~av~~v~-----~ 307 (517)
T cd03336 239 IKIFGAKVRVDSTAKVAEIEEAEKEKMKNKVEKILKHGINCFINRQLIYNYPEQLFADA------GIMAIEHAD-----F 307 (517)
T ss_pred ccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC------CcEEEecCC-----H
Confidence 55544 33578899999999999999999999998776 679999776 5
Q ss_pred chHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHH
Q 009601 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (531)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~ 424 (531)
++|+|||++|||++++ +++++++++||+|+.|+. +++++++|.+|+.
T Consensus 308 ~~L~rIa~~tGa~ii~-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~------------------------- 357 (517)
T cd03336 308 DGVERLALVTGGEIAS-----TFDHPELVKLGTCKLIEEIMIGEDKLIRFSGVAA------------------------- 357 (517)
T ss_pred HHHHHHHHHhCCEEec-----ccCCCCcccccccceEEEEEECCeEEEEEEccCC-------------------------
Confidence 6799999999999998 588999999999999974 5789999998865
Q ss_pred HHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHH
Q 009601 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (531)
Q Consensus 425 ~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (531)
+++|||+|||+|+.+++|.+|+++||++++++++++| +|||||++||+++..|++++++.++.+| +++
T Consensus 358 ----------~~~~TI~lrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i 426 (517)
T cd03336 358 ----------GEACTIVLRGASQQILDEAERSLHDALCVLAQTVKDTRVVLGGGCSEMLMAKAVEELAKKTPGKKS-LAI 426 (517)
T ss_pred ----------CceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhhCCCHHH-HHH
Confidence 4689999999999999999999999999999999998 9999999999999999999888888877 899
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 504 DIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 504 ~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++|++||+.||++|++|||+|+.+++.
T Consensus 427 ~~~a~ALe~ip~~La~NaG~d~~~~l~ 453 (517)
T cd03336 427 EAFAKALRQLPTIIADNAGYDSAELVA 453 (517)
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 999999999999999999999998875
No 27
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.4e-78 Score=662.26 Aligned_cols=397 Identities=21% Similarity=0.323 Sum_probs=359.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.+++..|+.+|..|+++|+|||||+||+|||+++.| ++|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 17 ~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g-~~iTnDG~TIlk~i~~~hP~----a~ll~~~a~~q~~~~GDGT 91 (522)
T TIGR02345 17 KGQLISNINACVAIAEILKTTLGPRGMDKLIVGKNG-ATVSNDGATILKLLDIVHPA----AKTLVDIAKSQDSEVGDGT 91 (522)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCceEEECCCC-cEEeCcHHHHHHHhcccChH----HHHHHHHHHHHHHHhCCCc
Confidence 789999999999999999999999999999999999 99999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC-----ch-hhHHhhhhccC------ChhhH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAG------NNYEV 219 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~-----~~-~l~~va~ts~~------~~~~l 219 (531)
||+|||+++||+++.+++++|+||+.|++||+.|.+.++++|++++++++ +. .|.++|+|+++ ++++|
T Consensus 92 Tt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~l 171 (522)
T TIGR02345 92 TSVVILAGELLKEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVTIDEVKGEQREVLEKCAATALNSKLIAHEKEFF 171 (522)
T ss_pred hhHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCcccccHHHHHHHHHHHhccccccchHHHH
Confidence 99999999999999999999999999999999999999999999999987 33 79999999976 57999
Q ss_pred hHHHHHHHHhhccCC------ceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccC----
Q 009601 220 GNMIAEAMSKVGRKG------VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT---- 289 (531)
Q Consensus 220 ~~li~~A~~~v~~~g------~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~---- 289 (531)
++++++|+.++++++ .|...+|++++|+ ++++|++|+++|.+|+|.+ |+..++||+|+++|++|+
T Consensus 172 ~~l~~~A~~~v~~~~~~~~~I~i~ki~Ggs~~ds-~~v~Giv~~~~~~~~~~~~----~~~~~~n~kIll~~~~Le~~~~ 246 (522)
T TIGR02345 172 SKMIVDAVLQLDIDDLDLKLIGVKKVQGGSLQDS-VLVNGVAFKKTFSYAGFEQ----QPKKFANPKILLLNVELELKAE 246 (522)
T ss_pred HHHHHHHHHHHhhccCChhHheEEeecCCCHHhc-ceecceEEecccCcccccc----CCceeccceEEEEecCcccCcc
Confidence 999999999998652 1333489999999 7999999999999998754 667799999999999863
Q ss_pred ---------CHHH-----------HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccch
Q 009601 290 ---------NARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (531)
Q Consensus 290 ---------~~~~-----------l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~ 349 (531)
++++ +.+.++++++.|+++++++++|++.++++|..+ +|++++ ++.+++
T Consensus 247 ~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~i~d~~~~~L~~~------~I~~~~-----~v~~~d 315 (522)
T TIGR02345 247 KDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLPIGDLATQYFADH------NIFCAG-----RVSDED 315 (522)
T ss_pred ccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCccHHHHHHHHHC------CcEEEe-----cCCHHH
Confidence 3333 244577788899999999999999999999876 456665 556899
Q ss_pred HHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHH
Q 009601 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (531)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l 426 (531)
+++|+++|||++++ +++++++++||+|+.++. +++++++|.||+++
T Consensus 316 l~ria~~tga~ii~-----~~~~l~~~~LG~~~~ie~~~~~~~r~~~~~g~~~~-------------------------- 364 (522)
T TIGR02345 316 LKRVVKACGGSIQS-----TTSDLEADVLGTCALFEERQIGSERYNYFTGCPHA-------------------------- 364 (522)
T ss_pred HHHHHHHhCCeEEc-----chhhCChhhccCCceEEEEEECCeEEEEEEcCCCC--------------------------
Confidence 99999999999998 588889999999999975 46789999988652
Q ss_pred HHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHH
Q 009601 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (531)
Q Consensus 427 ~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (531)
++|||+|||+|+.+++|++|+++||+++++++++++ +|||||++||+++.+|++++.+..+.+| +++++
T Consensus 365 ---------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~~-~~i~~ 434 (522)
T TIGR02345 365 ---------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRALKARKIVAGGGAIEMELSKILREHSKKIDGKQQ-LIIEA 434 (522)
T ss_pred ---------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHHhhCCCHHH-HHHHH
Confidence 589999999999999999999999999999999985 9999999999999999998877778777 89999
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccc
Q 009601 506 VKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 506 ~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
|++||+.||++|++|||+|+.+++.
T Consensus 435 ~a~aL~~ip~~La~NaG~d~~~vl~ 459 (522)
T TIGR02345 435 FAKALEIIPRSLCENAGFDSIEILN 459 (522)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 9999999999999999999998875
No 28
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=9.9e-78 Score=658.64 Aligned_cols=394 Identities=21% Similarity=0.349 Sum_probs=358.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecC-----CCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK-----YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDL 146 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~-----~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~ 146 (531)
++++..|+.||..|+++|+|||||+||+|||+++ +|+++|||||+||||+|+++||. |+|++++|++||++
T Consensus 21 ~~a~~~ni~a~~~i~~~vkttlGP~G~~Kmi~~~~~~~~~G~~~iTnDG~TIlk~i~~~hP~----akll~~~a~~qd~~ 96 (533)
T PTZ00212 21 ETARLQSFVGAIAVADLVKTTLGPKGMDKILQPMSEGPRSGNVTVTNDGATILKSVWLDNPA----AKILVDISKTQDEE 96 (533)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCccceEeecCCCcccCCCEEEeccHHHHHHhccCcCHH----HHHHHHHHHhhhhh
Confidence 7899999999999999999999999999999998 69999999999999999999997 99999999999999
Q ss_pred cCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc-----h-hhHHhhhhccCC-----
Q 009601 147 AGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAGN----- 215 (531)
Q Consensus 147 ~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~~----- 215 (531)
+||||||+|+|+++||+++.+++++|+||+.|++||++|++.+++.|+++++++++ . .|.++|+|+++.
T Consensus 97 ~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~t~l~sk~~~~ 176 (533)
T PTZ00212 97 VGDGTTSVVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFDHGSDEEKFKEDLLNIARTTLSSKLLTV 176 (533)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCccchhhHHHHHHHHHHHhcccccch
Confidence 99999999999999999999999999999999999999999999999999998864 3 789999987643
Q ss_pred -hhhHhHHHHHHHHhhccC---Cc--eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeecccc-
Q 009601 216 -NYEVGNMIAEAMSKVGRK---GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI- 288 (531)
Q Consensus 216 -~~~l~~li~~A~~~v~~~---g~--I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i- 288 (531)
.+.|++++++|+..+.+. .. |.+.+|++++|+ ++++|+++++++.+ .|+.+++||+|+++|++|
T Consensus 177 ~~~~l~~i~~~av~~i~~~~~~~~I~i~ki~Ggsi~ds-~lv~G~v~~~~~~~--------~~~~~i~n~kIll~~~~Le 247 (533)
T PTZ00212 177 EKDHFAKLAVDAVLRLKGSGNLDYIQIIKKPGGTLRDS-YLEDGFILEKKIGV--------GQPKRLENCKILVANTPMD 247 (533)
T ss_pred hHHHHHHHHHHHHHHHhccCCccceEEEEecCcCcccc-EEEEeEEEecccCC--------CCCccccCCcEEEEeCCCC
Confidence 578999999999998543 12 444699999999 89999999998644 267889999999999986
Q ss_pred -------------CCHHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCc
Q 009601 289 -------------TNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGE 344 (531)
Q Consensus 289 -------------~~~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~ 344 (531)
++++++ .+.++.+++.|+++++++++|++.++++|.++ +|+||+.
T Consensus 248 ~~k~~~~~~~~~i~~~~~~~~l~~~E~~~i~~~v~~Ii~~gv~vvv~~~~I~d~a~~~L~~~------~I~avr~----- 316 (533)
T PTZ00212 248 TDKIKIYGAKVKVDSMEKVAEIEAAEKEKMKNKVDKILAHGCNVFINRQLIYNYPEQLFAEA------GIMAIEH----- 316 (533)
T ss_pred CCcccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC------CCEEEec-----
Confidence 555544 23578889999999999999999999998876 5688873
Q ss_pred cccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHH
Q 009601 345 RKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (531)
Q Consensus 345 ~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~ 421 (531)
+++++++|||++|||++++ +++++++++||+|+.|+ ++++++++|.+|..
T Consensus 317 v~~~~l~rIa~~tGa~iis-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~---------------------- 369 (533)
T PTZ00212 317 ADFDGMERLAAALGAEIVS-----TFDTPEKVKLGHCDLIEEIMIGEDKLIRFSGCAK---------------------- 369 (533)
T ss_pred CCHHHHHHHHHHhCCEEee-----cCCCCCHHHccCCceEEEEEECCeEEEEEEccCC----------------------
Confidence 4578999999999999998 58889999999999998 67889999998864
Q ss_pred HHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHH
Q 009601 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (531)
Q Consensus 422 e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (531)
+++|||+|||+|+.+++|+||+++|||+++++++++| +|||||++|+++|.+|++++++..+.+|
T Consensus 370 -------------~~~~TI~lrG~t~~~l~E~er~i~DAl~vv~~~i~~~~vVpGGGa~e~~ls~~L~~~~~~~~~~~~- 435 (533)
T PTZ00212 370 -------------GEACTIVLRGASTHILDEAERSLHDALCVLSQTVKDTRVVLGGGCSEMLMANAVEELAKKVEGKKS- 435 (533)
T ss_pred -------------CCEEEEEEECCChhHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhhCCCHHH-
Confidence 4799999999999999999999999999999999998 9999999999999999999888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 501 ~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+++++|++||+.||++|++|||+|+.+++.
T Consensus 436 ~~i~~~a~aL~~ip~~La~NaG~d~~~vl~ 465 (533)
T PTZ00212 436 LAIEAFAKALRQIPTIIADNGGYDSAELVS 465 (533)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 899999999999999999999999998875
No 29
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.3e-77 Score=650.36 Aligned_cols=378 Identities=21% Similarity=0.317 Sum_probs=347.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.+++..|+.||..|+++++|||||+||+|||+++.|+++|||||+|||++|+++||. |+|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~~~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~~~~GDGT 90 (480)
T cd03337 15 RKAQLGNIQAAKTVADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGT 90 (480)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCcCceEeEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHhHHHHhCCCc
Confidence 779999999999999999999999999999999999999999999999999999997 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-hhHHhhhhccC------ChhhHhHH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAG------NNYEVGNM 222 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~------~~~~l~~l 222 (531)
||+|+|+++||+++.+++++|+||+.|++||++|.+.++++|++++++++ +. .|.++++|+++ +++.|+++
T Consensus 91 tt~vvL~~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~~~ls~l 170 (480)
T cd03337 91 TSVIILAGEILAVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIPVDVNDRAQMLKIIKSCIGTKFVSRWSDLMCNL 170 (480)
T ss_pred chhHhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHhccCcchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 44 79999999987 56889999
Q ss_pred HHHHHHhhccC--C---------ceE--eecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccC
Q 009601 223 IAEAMSKVGRK--G---------VVT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (531)
Q Consensus 223 i~~A~~~v~~~--g---------~I~--v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~ 289 (531)
+++|+..++++ + .|+ ..+|++++|| ++++|++|++++.+| +|+.+++||+|++++++|+
T Consensus 171 v~~Ai~~v~~~~~~~~~~id~~~~I~i~ki~Ggs~~ds-~li~Gvvi~k~~~~~-------~m~~~~~n~kIlll~~~Le 242 (480)
T cd03337 171 ALDAVKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDS-RVLDGVMLNKDVTHP-------KMRRRIENPRIVLLDCPLE 242 (480)
T ss_pred HHHHHHhhccccCCCCCcCChhhceEEEEecCCCHHhc-ccccceEEeccCCCC-------CCCcEecCCCEEEEecCcc
Confidence 99999999864 2 133 3579999998 999999999998886 4788899999999999987
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCcc
Q 009601 290 NARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLA 369 (531)
Q Consensus 290 ~~~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~ 369 (531)
. |||++++|+++++++|.++ +|++|+ ++++++|+|||++|||++++ +
T Consensus 243 ~-----------------lvi~~k~I~d~al~~L~~~------~I~~v~-----~v~~~~L~rIa~~tGa~ii~-----~ 289 (480)
T cd03337 243 Y-----------------LVITEKGVSDLAQHYLVKA------GITALR-----RVRKTDNNRIARACGATIVN-----R 289 (480)
T ss_pred e-----------------EEEeCCCccHHHHHHHHHC------CcEEEE-----eCCHHHHHHHHHHHCCEEec-----c
Confidence 6 9999999999999999887 578887 46689999999999999998 5
Q ss_pred ccCCCCCCCcee-eEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCC
Q 009601 370 LDKVGKEVLGNA-SKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQ 445 (531)
Q Consensus 370 l~~~~~~~lG~~-~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~ 445 (531)
+++++++.||+| +.++. ++++++++++|+++ +.+||+|||+
T Consensus 290 ~~~l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~-----------------------------------~~~TIllrG~ 334 (480)
T cd03337 290 PEELTESDVGTGAGLFEVKKIGDEYFTFITECKDP-----------------------------------KACTILLRGA 334 (480)
T ss_pred hhhCCHHHcCCcccEEEEEEeCCeEEEEEEcCCCC-----------------------------------CEEEEEEECC
Confidence 888889999995 44443 46788999988763 6899999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 009601 446 TETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVN 524 (531)
Q Consensus 446 t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d 524 (531)
|+.+++|.||+++||+++++++++++ +|||||++||++|.+|++++.+.++.+| +++++|++||+.||++|++|||+|
T Consensus 335 t~~~l~e~er~l~DAl~v~~~~~~~~~~vpGGGa~E~~ls~~l~~~~~~~~~~~~-~~~~~~a~al~~ip~~La~NaG~d 413 (480)
T cd03337 335 SKDVLNEVERNLQDAMAVARNIILNPKLVPGGGATEMAVSHALSEKAKSIEGVEQ-WPYKAVASALEVIPRTLAQNCGAN 413 (480)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999996 9999999999999999998888888887 899999999999999999999999
Q ss_pred cccccc
Q 009601 525 GSVVSE 530 (531)
Q Consensus 525 ~~~v~~ 530 (531)
+.+++.
T Consensus 414 ~~~~l~ 419 (480)
T cd03337 414 VIRTLT 419 (480)
T ss_pred HHHHHH
Confidence 998875
No 30
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.3e-77 Score=657.08 Aligned_cols=394 Identities=23% Similarity=0.320 Sum_probs=353.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
++++..|+.+|..|+++|+|||||+||||||++++|+++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 17 ~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~e~a~sqd~~~GDGT 92 (531)
T TIGR02346 17 EEAVIKNIEACKELSNITRTSLGPNGMNKMVINHLDKLFVTNDAATILRELEVQHPA----AKLLVMASEMQENEIGDGT 92 (531)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCcCCeEEEcCCCCEEEECcHHHHHHhccccCHH----HHHHHHHHHHHhhhhCCCh
Confidence 459999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhccc-ccCc---h-hhHHhhhhccC-----ChhhHhH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSK-EVED---S-ELADVAAVSAG-----NNYEVGN 221 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~-~v~~---~-~l~~va~ts~~-----~~~~l~~ 221 (531)
||+|||+++||+++.+++++|+||..|++||+.|++.+++.|+++++ ++++ . .|.++++|+++ ++++|++
T Consensus 93 Tt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~tsl~sK~~~~~~~ls~ 172 (531)
T TIGR02346 93 NLVIVLAGELLDKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVWEVEDVRNKKELIKALKASISSKQYGNEDFLAQ 172 (531)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhccccCchHHHHHH
Confidence 99999999999999999999999999999999999999999999986 7644 3 78899888774 3889999
Q ss_pred HHHHHHHhhccCC--c-----e--EeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeecccc----
Q 009601 222 MIAEAMSKVGRKG--V-----V--TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI---- 288 (531)
Q Consensus 222 li~~A~~~v~~~g--~-----I--~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i---- 288 (531)
++++|+.++++++ . | ...+|++++|+ ++++|++|++++. .+++.++||||+++++++
T Consensus 173 l~~~Ai~~v~~~~~~~~~~~~I~i~ki~G~s~~ds-~li~Gi~~~~~~~---------~~~k~i~n~kI~l~~~~l~~~~ 242 (531)
T TIGR02346 173 LVAKACSTVMPKNPENFNVDNIRVSKIMGGSISNS-EVLKGMVFNREAE---------GSVKRVKNAKVAVFSCPLDTAT 242 (531)
T ss_pred HHHHHHHHHhhcCCCcCChhHeeEEEecCCChhhc-eeEeeeEEeccCC---------CCceeccCCCEEEEecCcCCCc
Confidence 9999999998754 2 2 22489999999 9999999999832 145678899999998873
Q ss_pred ---------CCHH-----------HHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccc
Q 009601 289 ---------TNAR-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (531)
Q Consensus 289 ---------~~~~-----------~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~ 348 (531)
+++. ++.++++.+++.|+||||++++|++.++++|..+ +|+||++|+ ..
T Consensus 243 ~~~~~~~~~~~~~~l~~~~~~e~~~i~~~l~~i~~~g~~lvi~~~~I~d~~~~~l~~~------~I~av~~~~-----~~ 311 (531)
T TIGR02346 243 TETKGTVLIHNAEELLNYSKGEENQIEAYIKAIADSGVNVIVTGGSVGDMALHYCEKY------NIMVLKIPS-----KF 311 (531)
T ss_pred ccCceEEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCCcCHHHHHHHHHC------CcEEEecCC-----HH
Confidence 3333 3567799999999999999999999999988754 789999887 46
Q ss_pred hHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHH
Q 009601 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREK 425 (531)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~ 425 (531)
+|+|||.+|||++++ +++++++++||+|++|++ +++++.++.++..
T Consensus 312 ~l~~Ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~~~~~-------------------------- 360 (531)
T TIGR02346 312 ELRRLCKTVGATPLA-----RLGAPQPEEIGYVDSVYVSEIGGQKVTVFKQENG-------------------------- 360 (531)
T ss_pred HHHHHHHHHCCEEec-----ccccCCHhHccccceEEEEEECCEEEEEEEccCC--------------------------
Confidence 899999999999998 588888999999999985 4678888987652
Q ss_pred HHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHH
Q 009601 426 LNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 504 (531)
Q Consensus 426 l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~ 504 (531)
.++++||+|||+|+.+++|++|+++||++++++++++| +|||||++||+++.+|++++.+..+.+| ++++
T Consensus 361 --------~~~~~tI~lrG~t~~~l~E~er~i~DAl~~~k~ai~~~~vVpGGG~~e~~ls~~L~~~~~~~~~~~~-~~~~ 431 (531)
T TIGR02346 361 --------DSKISTIILRGSTKNLLDDIERAIDDGVNVIKALVKDNRFLPGAGATEIELALRLKKYANKLPGLDQ-YAIK 431 (531)
T ss_pred --------CCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHHH-HHHH
Confidence 25799999999999999999999999999999999999 9999999999999999998877778776 8999
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 505 IVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 505 ~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+|++||+.||++|++|||+|+.+++.
T Consensus 432 ~~a~aL~~ip~~L~~NaG~d~~~~~~ 457 (531)
T TIGR02346 432 KFAEAFEIIPRTLAENAGLNPNEVIP 457 (531)
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999999999998875
No 31
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3.2e-76 Score=644.50 Aligned_cols=394 Identities=23% Similarity=0.347 Sum_probs=354.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCC--CCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCC
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKY--GAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~--g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GD 149 (531)
.+++..|++|+..|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||. |+|++++|++||+++||
T Consensus 13 ~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~~~G~~~iTnDG~tIlk~l~i~hP~----akll~~~a~~qd~~~GD 88 (519)
T TIGR02341 13 ENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSGSSESGIMVTNDGATILKSIGVDNPA----AKVLVDMSKVQDDEVGD 88 (519)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEEeccCCCCCeEEeccHHHHHHHccCcChH----HHHHHHHHHHhHhhhCC
Confidence 77999999999999999999999999999999985 9999999999999999999997 99999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc-----h-hhHHhhhhccCC------hh
Q 009601 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAGN------NY 217 (531)
Q Consensus 150 GTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~~------~~ 217 (531)
||||+|||+++||+++.+++++|+||+.|++||+.|.+.++++|+++++++++ . .|.++|+|+++. .+
T Consensus 89 GTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~L~~ia~t~l~ski~~~~~~ 168 (519)
T TIGR02341 89 GTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSIDNGSDKTKFRDDLLNIARTTLSSKILSQHKD 168 (519)
T ss_pred chhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHHHHHHHhhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999998853 2 789999988764 47
Q ss_pred hHhHHHHHHHHhhccC---CceEe--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCC--
Q 009601 218 EVGNMIAEAMSKVGRK---GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITN-- 290 (531)
Q Consensus 218 ~l~~li~~A~~~v~~~---g~I~v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~-- 290 (531)
.|++++++|+..+.+. ..|.+ .+|++++|+ ++++|+++++++.+ .++..++||+|+++|++|+.
T Consensus 169 ~~s~l~~~av~~i~~~~~~~~i~i~k~~G~s~~~s-~l~~G~v~~~~~~~--------~~~~~~~n~~Ili~~~~Le~~~ 239 (519)
T TIGR02341 169 HFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSLNDS-YLDEGFLLEKKIGV--------NQPKRIENAKILIANTPMDTDK 239 (519)
T ss_pred HHHHHHHHHHHHhccCCChhheEEEEccCCCcccc-eEEeeEEEeccCCC--------CCceeeccccEEEEecCCCCCc
Confidence 7999999999998432 23444 489999999 89999999998543 25778999999999998743
Q ss_pred ------------HHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCcccc
Q 009601 291 ------------ARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (531)
Q Consensus 291 ------------~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~ 347 (531)
++++ .++++.+++.|++++++++.|++.++++|..+ +|++|+.|+ +
T Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~I~~~g~~~v~~~~~I~~~~~~~l~~~------~I~~v~~~~-----~ 308 (519)
T TIGR02341 240 VKVFGSRVRVDSTAKVAELEAAEKEKMKEKVEKILKHNINCFINRQLIYNYPEQLFADA------GVMAIEHAD-----F 308 (519)
T ss_pred cccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCcCCHHHHHHHHHC------CcEEEecCC-----H
Confidence 3333 23477889999999999999999999988775 679998776 6
Q ss_pred chHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHH
Q 009601 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (531)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~ 424 (531)
.+|+|||++|||++++ +++++++++||+|+.|+. +++++++|.+|++
T Consensus 309 ~~l~~ia~~tGa~ii~-----~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~------------------------- 358 (519)
T TIGR02341 309 EGIERLALVTGGEIVS-----TFDHPELVKLGSCDLIEEIMIGEDKLLKFSGVKL------------------------- 358 (519)
T ss_pred HHHHHHHHHhCCEEec-----ccccCCccccccCceEEEEEECCEEEEEEEcCCC-------------------------
Confidence 6999999999999999 588889999999998874 5778999998875
Q ss_pred HHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHH
Q 009601 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (531)
Q Consensus 425 ~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (531)
+++|||+|||+|+.+++|.+|+++||+++++++++++ +|||||++||+++..|++++++.++.+| +++
T Consensus 359 ----------~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i 427 (519)
T TIGR02341 359 ----------GEACTIVLRGATQQILDESERSLHDALCVLSQTVKESRTVLGGGCSEMLMSKAVAVEAQKVPGKEA-LAV 427 (519)
T ss_pred ----------CCEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhcCCChHH-HHH
Confidence 4699999999999999999999999999999999996 9999999999999999998877778777 899
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 504 DIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 504 ~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++|++||+.||++|++|||+|+.+++.
T Consensus 428 ~~~a~Ale~ip~~La~NaG~d~~~~l~ 454 (519)
T TIGR02341 428 EAFARALRQLPTIIADNAGFDSAELVA 454 (519)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 999999999999999999999998875
No 32
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=3e-76 Score=638.54 Aligned_cols=381 Identities=23% Similarity=0.296 Sum_probs=345.6
Q ss_pred cHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCc
Q 009601 71 DGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDG 150 (531)
Q Consensus 71 ~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDG 150 (531)
.++++..|+++|..|+++|++||||+||+|||++++|+++|||||+||+++|+++||+ |+|++++|++||+++|||
T Consensus 6 ~~~~~~~ni~a~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~~~~~~GDG 81 (472)
T cd03341 6 LEEAVLRNIEACKELSQITRTSYGPNGMNKMVINHLEKLFVTSDAATILRELEVQHPA----AKLLVMASQMQEEEIGDG 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEEcCCCCEEEeCcHHHHHHhccccCHH----HHHHHHHHHHHhhhhCCC
Confidence 3789999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccc-cCc---h-hhHHhhhhcc-----CChhhHh
Q 009601 151 TTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKE-VED---S-ELADVAAVSA-----GNNYEVG 220 (531)
Q Consensus 151 TTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~-v~~---~-~l~~va~ts~-----~~~~~l~ 220 (531)
|||+|+|+++||+++.+++++|+||+.|++||+.|.+.+++.|++++++ +++ . .+.++++|++ +++++|+
T Consensus 82 TTt~vvL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l~ 161 (472)
T cd03341 82 TNLVVVLAGELLEKAEELLRMGLHPSEIIEGYEKALKKALEILEELVVYKIEDLRNKEEVSKALKTAIASKQYGNEDFLS 161 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHhcccccchHHHHH
Confidence 9999999999999999999999999999999999999999999999865 543 2 5778888775 3578999
Q ss_pred HHHHHHHHhhccC--Cc-------eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCH
Q 009601 221 NMIAEAMSKVGRK--GV-------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA 291 (531)
Q Consensus 221 ~li~~A~~~v~~~--g~-------I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~ 291 (531)
+++++|+.+++++ |. |...+|++++|| ++++|++|++.+. .++++++||+|++++++++.
T Consensus 162 ~l~~~a~~~~~~~~~~~~~~~~i~i~ki~Gg~~~ds-~lv~Giv~~~~~~---------~~~~~~~n~~Ili~~~~Le~- 230 (472)
T cd03341 162 PLVAEACISVLPENIGNFNVDNIRVVKILGGSLEDS-KVVRGMVFKREPE---------GSVKRVKKAKVAVFSCPFDI- 230 (472)
T ss_pred HHHHHHHHHHhhccCCcCChhHeEEEEecCCCcccc-eEEeeEEEccccC---------CCceeccCCcEEEEeccccC-
Confidence 9999999999875 43 233589999999 9999999987531 24578999999999999887
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCcccc
Q 009601 292 RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALD 371 (531)
Q Consensus 292 ~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~ 371 (531)
|+||||++++|+++++++|..+ +|+||++|+ +++|+|||++|||++++ +++
T Consensus 231 -------------g~~lvi~~~~I~d~al~~l~~~------~I~av~~~~-----~~~Le~Ia~~tGa~ii~-----~~~ 281 (472)
T cd03341 231 -------------GVNVIVAGGSVGDLALHYCNKY------GIMVIKINS-----KFELRRLCRTVGATPLP-----RLG 281 (472)
T ss_pred -------------CCeEEEECCCCCHHHHHHHHHC------CeEEEEeCC-----HHHHHHHHHHhCCEEec-----ccc
Confidence 8999999999999999987643 789999887 78899999999999998 578
Q ss_pred CCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHH
Q 009601 372 KVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTET 448 (531)
Q Consensus 372 ~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~ 448 (531)
+++++++|+|++|++. ++++++|.+|++ .++++||+|||+|+.
T Consensus 282 ~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~----------------------------------~~~~~TI~lrG~t~~ 327 (472)
T cd03341 282 APTPEEIGYCDSVYVEEIGDTKVVVFRQNKE----------------------------------DSKIATIVLRGATQN 327 (472)
T ss_pred cCCHhHCCCceEEEEEEECCeeEEEEEccCC----------------------------------CCCeEEEEEECCCHH
Confidence 8889999999999864 489999988754 147899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Q 009601 449 ELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSV 527 (531)
Q Consensus 449 ~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~ 527 (531)
+++|+||+++||++++++++++| +|||||++||+++..|++++.+..+.++ +++++|++||+.||++|++|||+||.+
T Consensus 328 ~l~E~er~i~DAl~~~~~ai~~~~vVpGGG~~e~~ls~~l~~~~~~~~~~~~-~~~~~~a~al~~ip~~L~~NaG~d~~~ 406 (472)
T cd03341 328 ILDDVERAIDDGVNVFKSLTKDGRFVPGAGATEIELAKKLKEYGEKTPGLEQ-YAIKKFAEAFEVVPRTLAENAGLDATE 406 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEeCcCHHHHHHHHHHHHHhhccCCHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHH
Confidence 99999999999999999999999 9999999999999999998877777776 899999999999999999999999998
Q ss_pred ccc
Q 009601 528 VSE 530 (531)
Q Consensus 528 v~~ 530 (531)
++.
T Consensus 407 ~~~ 409 (472)
T cd03341 407 VLS 409 (472)
T ss_pred HHH
Confidence 875
No 33
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=6.1e-76 Score=635.96 Aligned_cols=382 Identities=38% Similarity=0.552 Sum_probs=352.0
Q ss_pred cccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhccc
Q 009601 66 LHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTND 145 (531)
Q Consensus 66 i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~ 145 (531)
..++ ++++..|++||..|++++++||||+||+|||+++.|+++|||||+||+|+|+++||. |+|+++++++||+
T Consensus 3 ~~~~--~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~hp~----a~ll~~~~~~~~~ 76 (464)
T cd00309 3 REFG--EEARLSNINAAKALADAVKTTLGPKGMDKMLVDSLGDPTITNDGATILKEIEVEHPA----AKLLVEVAKSQDD 76 (464)
T ss_pred cccH--HHHHHHHHHHHHHHHHHHhcccCCCcCcEEEEcCCCCeEEEccHHHHHHhccCcCHH----HHHHHHHHHHHHh
Confidence 4566 899999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhccccc--Cch-hhHHhhhhccC------Ch
Q 009601 146 LAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV--EDS-ELADVAAVSAG------NN 216 (531)
Q Consensus 146 ~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v--~~~-~l~~va~ts~~------~~ 216 (531)
++||||||+++|+++||+++.+++++|+||..|++||+.|++.+++.|+++++++ .+. .+.++++|+++ ++
T Consensus 77 ~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~ 156 (464)
T cd00309 77 EVGDGTTTVVVLAGELLKEAEKLLAAGIHPTEIIRGYEKAVEKALEILKEIAVPIDVEDREELLKVATTSLNSKLVSGGD 156 (464)
T ss_pred HhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCccCCCCHHHHHHHhHhcccccccccch
Confidence 9999999999999999999999999999999999999999999999999999984 444 89999999998 78
Q ss_pred hhHhHHHHHHHHhhcc------CCceEe--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeecccc
Q 009601 217 YEVGNMIAEAMSKVGR------KGVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI 288 (531)
Q Consensus 217 ~~l~~li~~A~~~v~~------~g~I~v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i 288 (531)
+++++++++|+.++++ .+.|++ .+|++++|| ++++|++|+++|.+|+ |+.+++||+|++++++|
T Consensus 157 ~~l~~l~~~Ai~~v~~~~~~~~~~~I~i~k~~gg~~~ds-~li~Gi~~~~~~~~~~-------m~~~~~n~~Ili~~~~L 228 (464)
T cd00309 157 DFLGELVVDAVLKVGKENGDVDLGVIRVEKKKGGSLEDS-ELVVGMVFDKGYLSPY-------MPKRLENAKILLLDCKL 228 (464)
T ss_pred HHHHHHHHHHHHHhccccCccccceEEEEecCCCCcccc-eeeeeEEEecCCCCCC-------CceeecCceEEEEecCc
Confidence 9999999999999988 456555 589999999 8999999999999997 46789999999999998
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCc
Q 009601 289 TNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGL 368 (531)
Q Consensus 289 ~~~~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~ 368 (531)
+. +||++++|+++++++|..+ +|++|+. +++++|+|||++|||++++
T Consensus 229 e~-----------------lIi~~~~I~~~al~~L~~~------~I~~v~~-----~~~~~L~~Ia~~tGa~ii~----- 275 (464)
T cd00309 229 EY-----------------VVIAEKGIDDEALHYLAKL------GIMAVRR-----VRKEDLERIAKATGATIVS----- 275 (464)
T ss_pred ce-----------------EEecCCCcCHHHHHHHHHC------CeEEEEe-----CCHHHHHHHHHHhCCEEec-----
Confidence 87 7788888999999998875 6788885 5689999999999999998
Q ss_pred cccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCC
Q 009601 369 ALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQ 445 (531)
Q Consensus 369 ~l~~~~~~~lG~~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~ 445 (531)
++++++++.+|+|+.|++ +++++++|.++.. +++|||+|||+
T Consensus 276 ~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~-----------------------------------~~~~TIllrG~ 320 (464)
T cd00309 276 RLEDLTPEDLGTAGLVEETKIGDEKYTFIEGCKG-----------------------------------GKVATILLRGA 320 (464)
T ss_pred ccccCCcccCccccEEEEEEEcCeeEEEEEecCC-----------------------------------CCEEEEEEeCC
Confidence 478888999999999986 4567888887754 36899999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 009601 446 TETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVN 524 (531)
Q Consensus 446 t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d 524 (531)
|+.+++|+||+++||+++++++++++ +|||||++||+++++|++++.+.++.+| +++++|++||+.||++|++|||+|
T Consensus 321 t~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGGa~E~~ls~~L~~~~~~~~~~~~-~~~~~~a~aL~~ip~~L~~NaG~d 399 (464)
T cd00309 321 TEVELDEAERSLHDALCAVRAAVEDGGIVPGGGAAEIELSKALEELAKTLPGKEQ-LGIEAFADALEVIPRTLAENAGLD 399 (464)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCcHHHHHHHHHHHHHhcccchHHH-HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999996 9999999999999999999877777776 899999999999999999999999
Q ss_pred cccccc
Q 009601 525 GSVVSE 530 (531)
Q Consensus 525 ~~~v~~ 530 (531)
+.+++.
T Consensus 400 ~~~~~~ 405 (464)
T cd00309 400 PIEVVT 405 (464)
T ss_pred HHHHHH
Confidence 988764
No 34
>KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.1e-74 Score=574.03 Aligned_cols=399 Identities=21% Similarity=0.338 Sum_probs=363.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.-..-+|+.+|..+++.++|||||+||||+|++..|+++|||||+||+|-+++-||+ |+.++++|++||.|+||||
T Consensus 19 k~QlvSNInaC~~v~e~~rtTLGP~GmDkLivd~~g~~tIsNDGATIlKlldivhPa----aktlVdia~sQDaEVGDGT 94 (543)
T KOG0361|consen 19 KGQLVSNINACTAVAEALRTTLGPRGMDKLIVDSKGKTTISNDGATILKLLDIVHPA----AKTLVDIARSQDAEVGDGT 94 (543)
T ss_pred chhhhhchHHHHHHHHHHHhccCccccceeeecCCCcEEEecCcHHHHHHHhhcChh----HHHHHHHHhhccccccCCc
Confidence 345568899999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-----hhHHhhhhccC------Chhh
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-----ELADVAAVSAG------NNYE 218 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-----~l~~va~ts~~------~~~~ 218 (531)
||||+||+|+|+++..+++.|+||..|+++|++|...+++.|+++++.++. . .|++.|.|+++ ..++
T Consensus 95 TSVv~la~E~lk~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~~~~~r~lL~KcA~T~lsSKlI~~ek~f 174 (543)
T KOG0361|consen 95 TSVVLLAAEFLKEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSSKTELRELLEKCAATALSSKLIRQEKEF 174 (543)
T ss_pred eeEeeeHHHHHHhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccchhhHHHHHHHHHHHHhhhhhhhhhHHH
Confidence 999999999999999999999999999999999999999999999998872 1 57888888764 3799
Q ss_pred HhHHHHHHHHhhccC---Cc--eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc------
Q 009601 219 VGNMIAEAMSKVGRK---GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (531)
Q Consensus 219 l~~li~~A~~~v~~~---g~--I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~------ 287 (531)
|+++++||+..+..+ .. |++.+||+++|| .+++|+.|.+.|....| +.+|+.|.||||+++|..
T Consensus 175 F~~MvVDAV~~ld~~l~~~mIGIKKV~GG~~~dS-~lv~GVAFkKtFsYAGf----EqqPKk~~NpkIl~LnvELElKaE 249 (543)
T KOG0361|consen 175 FAKMVVDAVLTLDNDLDLNMIGIKKVPGGAMEDS-LLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNVELELKAE 249 (543)
T ss_pred HHHHHHHHHHhhccccchhhcceeecCCCccchh-hhccceeeeehccccch----hhCccccCCceEEEEeeeeeeccc
Confidence 999999999999753 22 667899999999 79999999999877665 568889999999999875
Q ss_pred -------cCCHHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccch
Q 009601 288 -------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (531)
Q Consensus 288 -------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~ 349 (531)
+++++++ .+.|+++..+|.++|+..-.|.|.|-++|..+.+ .+.|+++.++
T Consensus 250 kdNAEiRv~~v~eyQ~iVDAEW~Ii~~KL~ki~~sGAnVVLSkLpIGD~ATQyFAdrdi-----------FCAGRV~~eD 318 (543)
T KOG0361|consen 250 KDNAEIRVDNVEEYQAIVDAEWNIIYDKLDKIHESGANVVLSKLPIGDLATQYFADRDI-----------FCAGRVPEED 318 (543)
T ss_pred ccCceeecCCHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEecccchHHHHHHhhccCc-----------eecCcCCHHH
Confidence 3455554 3458899999999999999999999999987643 4678999999
Q ss_pred HHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHH
Q 009601 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (531)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l 426 (531)
|.|+..+|||++.+ +..++.++.||.|..++ ++++.|-+|+||+.
T Consensus 319 l~Rv~~acGGsi~t-----t~~~i~~~~LG~C~~FeE~QvG~eRyN~Fegcp~--------------------------- 366 (543)
T KOG0361|consen 319 LNRVMQACGGSIQT-----TVSDIKEEVLGTCALFEERQVGGERYNLFEGCPK--------------------------- 366 (543)
T ss_pred HHHHHHhcCcchhh-----hhhhcchhhcchhhhHHHHhhcchhhhhhcCCCc---------------------------
Confidence 99999999999998 57888999999999997 57899999999986
Q ss_pred HHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHH
Q 009601 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (531)
Q Consensus 427 ~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (531)
.+.||+++||+-++.++|.+|++|||++++|.|+++. ||+|||++||++|++|++++.++.+++| +.+.+
T Consensus 367 --------aktcTliLRGgaeqfieE~eRSlHDAImIVrralkn~~vVaGGGaiEMElSk~lRd~S~ti~gK~q-~~i~A 437 (543)
T KOG0361|consen 367 --------AKTCTLILRGGAEQFIEETERSLHDAIMIVRRALKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQQ-LFINA 437 (543)
T ss_pred --------cceeEEEEeccHHHHHHHHhhhhhhHHHHHHHHhccCcEeeCCceeeehHHHHHHHhhcccCcHHH-HHHHH
Confidence 3689999999999999999999999999999999998 9999999999999999999999999987 88999
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccC
Q 009601 506 VKRALCYPLKLIAKNAGVNGSVVSEK 531 (531)
Q Consensus 506 ~a~AL~~ip~~L~~NaG~d~~~v~~k 531 (531)
|++|||.||++||+|||+|..+++.|
T Consensus 438 ~akalEvIPrqLc~NaGfDa~~ilnk 463 (543)
T KOG0361|consen 438 YAKALEVIPRQLCDNAGFDATNILNK 463 (543)
T ss_pred HHHHHHHhHHHHhhhcCCcHHHHHHH
Confidence 99999999999999999999988764
No 35
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=1.4e-69 Score=588.61 Aligned_cols=382 Identities=29% Similarity=0.473 Sum_probs=343.9
Q ss_pred HHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCccchHHHHHHHHHHH
Q 009601 85 LADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAE 164 (531)
Q Consensus 85 la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGTTtvvvLa~~LL~~ 164 (531)
|+++|++||||+||+|||+++.|+++|||||+||+++++++||+ ++|+++++++|++++||||||+|+|+++||++
T Consensus 1 l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~~P~----~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~ 76 (485)
T PF00118_consen 1 LADIVKSSLGPKGRDKLIVNDSGKIIITNDGATILKSLKINHPI----AKLLVEASKSQDEEVGDGTTSVVLLACELLRN 76 (485)
T ss_dssp HHHHHGCCSSTTS-EEEEEESSSSEEEESSHHHHHHHSTBSSHH----HHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHH
T ss_pred ChhhcccCcCCCCCeEEEEcCCCCeEEEechhHHHHHhhhccch----hhhHHHhHHHHHhhhccccceeeecccchhhh
Confidence 68999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch--hhHHhhhhccCCh------hhHhHHHHHHHHhhccC---
Q 009601 165 GVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS--ELADVAAVSAGNN------YEVGNMIAEAMSKVGRK--- 233 (531)
Q Consensus 165 a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~--~l~~va~ts~~~~------~~l~~li~~A~~~v~~~--- 233 (531)
+.+++++|+||..|++||+.+.+.+++.|++++++++.+ .+.++++|+++++ +.|++++++|+..+..+
T Consensus 77 ~~~li~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~~~~~~~~l~~i~~t~l~~k~~~~~~~~l~~li~~a~~~~~~~~~~ 156 (485)
T PF00118_consen 77 ALKLIKKGIHPQEIIRGLQEALKIILEYLEKISIPINNDDESLLNIAKTSLNSKISSSWSDHLSKLIVDAIKSIKSNFDL 156 (485)
T ss_dssp HHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHSEESTSTSHHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHHHTTTHHG
T ss_pred hhhhhhccccccchhhhhhhhhhhhhhhhhhhhccccccchhhhhhhcccccccccccchhhhhhhHHHHHHhhcccccc
Confidence 999999999999999999999999999999999988764 7999999998876 89999999999444211
Q ss_pred Cc--eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHH------------------
Q 009601 234 GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARD------------------ 293 (531)
Q Consensus 234 g~--I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~------------------ 293 (531)
+. +....|++++|| ++++|++|+++|.+| +|+..+++|+|++++++|+..+.
T Consensus 157 ~~i~i~~i~g~~~~dS-~li~Giv~~~~~~~~-------~~~~~~~~~~Ill~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 228 (485)
T PF00118_consen 157 DNIKIIKIPGGSISDS-ELINGIVLDKGFSSP-------NMPKKIENPKILLLNCPLEYSKSFKSEIRITSPEQLDELSK 228 (485)
T ss_dssp GGEEEEEEESSSSGGE-EEESEEEESSSBSST-------TSBSEEESEEEEEESSEBSSCCHSTEEEEESSTHHHHHHHH
T ss_pred cchhhhhhcccccccc-ccccceeeecccccc-------ccccccccceEEeeecccccccccccccchhhHHHHHHHHh
Confidence 12 233588899999 899999999999887 46777899999999999876655
Q ss_pred -----HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCc
Q 009601 294 -----LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGL 368 (531)
Q Consensus 294 -----l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~ 368 (531)
+.++++++.+.|+++||++++|++.++++|..+++ .++ .++++.+|++|+.+||+++++
T Consensus 229 ~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I------~~i-----~~v~~~~l~~i~~~tg~~ii~----- 292 (485)
T PF00118_consen 229 QEKKYLKKILEKIINLGVNLIISQKSIDDEALQYLNKNGI------LVI-----RRVSKEDLERIARATGASIIS----- 292 (485)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEESSEBTHHHHHHHHHCTH------EEE-----SSEHHHHHHHHHHHHTSBEBS-----
T ss_pred hhhhhhccccceEeeeccceeeeecccccccchhhhhhhh------hcc-----ccchHHHHHhhhcccCCcEec-----
Confidence 88899999999999999999999999999988854 444 366799999999999999998
Q ss_pred cccCCCCCCCceeeEE---EEeCceEEEEcC--CCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeC
Q 009601 369 ALDKVGKEVLGNASKV---VLTKDTTTIVGD--GSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVG 443 (531)
Q Consensus 369 ~l~~~~~~~lG~~~~v---~i~~~~~~~~~g--~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~ 443 (531)
++++++++.+|+|+.+ ++++++++++++ +. .++.+||+||
T Consensus 293 ~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-----------------------------------~~~~~Till~ 337 (485)
T PF00118_consen 293 SLDDLSDEDLGFCKSVEEREIGNKKYIFIEGIGCL-----------------------------------SSKICTILLR 337 (485)
T ss_dssp SCGGSTGGGSEEEEEEEEEEETSSEEEEEEEHSES-----------------------------------SSSEEEEEEE
T ss_pred ccccccchhhhhhhhhhhccccccccccccccccc-----------------------------------ccCceEEEec
Confidence 4788888889999999 567899999983 43 3579999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcC
Q 009601 444 AQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAG 522 (531)
Q Consensus 444 G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG 522 (531)
|+|+.+++|.+++++||+++++++++++ +|||||++|++++++|++++.+.++.++ +++++|++||+.||++|++|||
T Consensus 338 g~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~~-~~~~~~a~aL~~ip~~L~~NaG 416 (485)
T PF00118_consen 338 GPTEFELEERERSIHDALKVLRSALKDGGVVPGGGATELHLSKALRKYAKSLSGKEQ-LAIEAFADALESIPKTLAQNAG 416 (485)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHHHHHSSEEEETTTHHHHHHHHHHHHHHHCSSSHHH-HHHHHHHHHTTHHHHHHHHHTT
T ss_pred cccchhHHHHHHHHHHHHHHHHHhccCCceeecCcchhhhhhhhHHHhhhcccCchh-hhHHHHHHHHHHhhhhhhhccC
Confidence 9999999999999999999999999987 9999999999999999999888777766 8999999999999999999999
Q ss_pred CCcccccc
Q 009601 523 VNGSVVSE 530 (531)
Q Consensus 523 ~d~~~v~~ 530 (531)
+|+.+++.
T Consensus 417 ~~~~~~~~ 424 (485)
T PF00118_consen 417 LDSSEVIS 424 (485)
T ss_dssp STHHHHHH
T ss_pred CCceeeeh
Confidence 99988764
No 36
>KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3e-70 Score=544.65 Aligned_cols=400 Identities=24% Similarity=0.333 Sum_probs=355.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.++|.+|+++.+.+++.++|||||+||||||....|+++|||||+||||.|++-||+ |+|+++++..||.++||||
T Consensus 25 ~~vR~sni~Aa~avadairTSLGPkGmDKMIq~~~gev~iTNDGaTILk~m~vlhP~----akmLvelS~aQD~eaGDGT 100 (534)
T KOG0358|consen 25 EQVRFSNIQAARAVADAIRTSLGPKGMDKMIQTGKGEVIITNDGATILKQMNVLHPA----AKMLVELSAAQDSEAGDGT 100 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccchhhHhhcCCCcEEEecChHHHHHHHhhhChH----HHHHHHhhhhccccccCCc
Confidence 778999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-hhHHhhhhccCC------hhhHhHH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN------NYEVGNM 222 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~------~~~l~~l 222 (531)
||||+||++||+.+.+|+++|+||+.|...|+.|.+..+++|++++.|++ +. .|.+-|+||+|+ ...++++
T Consensus 101 TsVVilaGaLL~~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~velsdre~Li~~atTsLnSKvvSq~s~llapm 180 (534)
T KOG0358|consen 101 TSVVILAGALLEAAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPVELSDRESLIKSATTSLNSKVVSQYSSLLAPM 180 (534)
T ss_pred eEEEEehhhHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCcccCcHHHHHHHHHhHhhHHHHHhhccccchH
Confidence 99999999999999999999999999999999999999999999998876 44 688889998863 5779999
Q ss_pred HHHHHHhhcc-C-------CceE--eecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeecccc----
Q 009601 223 IAEAMSKVGR-K-------GVVT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI---- 288 (531)
Q Consensus 223 i~~A~~~v~~-~-------g~I~--v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i---- 288 (531)
.++|+.++-. . ..|+ ++.||+++|+ ++++|++|++..... ..|..++++||-++.+.|
T Consensus 181 AVdAV~kv~dp~~~~nvdlkdIkivkklGgtvdDt-e~i~glvl~~~~~~~-------~gptriekAkIglIQF~iS~PK 252 (534)
T KOG0358|consen 181 AVDAVLKVIDPENATNVDLKDIKIVKKLGGTVDDT-ELIKGLVLTQKASKS-------AGPTRIEKAKIGLIQFQISPPK 252 (534)
T ss_pred HHHHHHhccCcccccccchhhhhhHHhhCCccchh-hhhcceEEeeecccC-------CCcchhhhceeeEEEEEecCCC
Confidence 9999999854 2 1233 3699999999 999999999864332 145677888888877643
Q ss_pred ---------CCHH-----------HHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccc
Q 009601 289 ---------TNAR-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (531)
Q Consensus 289 ---------~~~~-----------~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~ 348 (531)
++.. .++++++++++.|+++++++++|=.++++-|..|.+. .++|++|| ++.++
T Consensus 253 tdmen~iiv~DyaqMdrilkeER~YiL~mcKkIKk~gcnvLliQKSILRdavsDLAlHfL~-klkimvik-----dieRe 326 (534)
T KOG0358|consen 253 TDMENQIIVNDYAQMDRILKEERQYILNMCKKIKKAGCNVLLIQKSILRDAVSDLALHFLA-KLKIMVIK-----DIERE 326 (534)
T ss_pred CCcccceEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEeHHHHHHHHHHHHHHHHH-hCcEEEEc-----cccHh
Confidence 2332 3578899999999999999999887777777766653 46899998 66799
Q ss_pred hHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE----eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHH
Q 009601 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL----TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (531)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i----~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~ 424 (531)
++|.+|+.+|.+++. +++.++++.||+++-++. ++.+++-+.|+.+.
T Consensus 327 diefick~l~c~Pia-----~id~f~~d~Lg~adlveE~~~~G~gkivk~tg~~n~------------------------ 377 (534)
T KOG0358|consen 327 DIEFICKTLGCKPIA-----DIDHFTADKLGSADLVEETDSSGEGKIVKITGIQNA------------------------ 377 (534)
T ss_pred hHHHHHhhcCCeecc-----hhhhcChhhcCcchhhhhcccCCCccEEEEEEeecC------------------------
Confidence 999999999999999 599999999999998874 34477777776553
Q ss_pred HHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHH
Q 009601 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (531)
Q Consensus 425 ~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (531)
|..++|++||.+...++|.+|++|||||++|+.++.. ++||||+.||.++..|.+++.+..|.+. |.+
T Consensus 378 ----------g~tvsil~RGsn~lvleEaeRSlhDALCVirCLvk~r~li~GGGapEieia~~L~~~a~t~eG~~~-yc~ 446 (534)
T KOG0358|consen 378 ----------GRTVSILLRGSNKLVLEEAERSLHDALCVIRCLVKKRALIAGGGAPEIEIALRLSALARTLEGVEA-YCW 446 (534)
T ss_pred ----------CCceEEEEecCchhhhHHHhhhhhhhhHHHHhhhhccceecCCCCcchHHHHHHHHHHhhhccchh-HHH
Confidence 6789999999999999999999999999999999998 9999999999999999999999999888 899
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccc
Q 009601 504 DIVKRALCYPLKLIAKNAGVNGSVVS 529 (531)
Q Consensus 504 ~~~a~AL~~ip~~L~~NaG~d~~~v~ 529 (531)
++|++|||.||.|||+|||++|..++
T Consensus 447 rafA~AlEvIP~tLAeNAGLnpI~~V 472 (534)
T KOG0358|consen 447 RAFADALEVIPYTLAENAGLNPIATV 472 (534)
T ss_pred HHHHHHHhcccHhHHhhCCCChhhHH
Confidence 99999999999999999999999775
No 37
>KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-68 Score=530.29 Aligned_cols=394 Identities=24% Similarity=0.362 Sum_probs=354.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecC--CCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCC
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK--YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~--~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GD 149 (531)
+.+|...+.|...+.|+|+|||||+||+||+... .|.+.+||||+||||++.+++|+ ||++++.++-||+|+||
T Consensus 17 e~ArlssfvGaiaigDlvKsTLGPKGMdKiL~s~~~~~~v~VTNDGAtILksi~vDnpa----AkvLv~~S~vQD~EvGD 92 (527)
T KOG0363|consen 17 ENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSTGRAGTVMVTNDGATILKSIGVDNPA----AKVLVDISKVQDDEVGD 92 (527)
T ss_pred hhHHHHHHHHHHHHHHHHHhccCcchHHHHHhccCCCCceEEecchHHHHHhcCCCCch----hhheeccccccccccCC
Confidence 7899999999999999999999999999999963 46799999999999999999999 99999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch------hhHHhhhhccC------Chh
Q 009601 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS------ELADVAAVSAG------NNY 217 (531)
Q Consensus 150 GTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~------~l~~va~ts~~------~~~ 217 (531)
|||||+||+++||+|+.+|+.+.+||+.|+.||+.|...+++.|.+.+++..++ +|.++|+|.+. ..+
T Consensus 93 GTTSV~vlaaeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kfr~DLl~iarTTL~SKiLsq~ke 172 (527)
T KOG0363|consen 93 GTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKFREDLLKIARTTLSSKILSQDKE 172 (527)
T ss_pred CceehHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999999999999999999999999999999999988765422 79999999764 468
Q ss_pred hHhHHHHHHHHhhccCC-----ceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccC---
Q 009601 218 EVGNMIAEAMSKVGRKG-----VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (531)
Q Consensus 218 ~l~~li~~A~~~v~~~g-----~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~--- 289 (531)
+|++|+++|+.++...+ .|.++.||+++|| ++-+|+.+++.+-. ++|+.++||+||+-+.+++
T Consensus 173 hFaelavdAV~rLkGs~nL~~IqIIK~~Gg~l~dS-fLDeGFlL~K~igv--------~qpkriena~iLIANT~mDtDK 243 (527)
T KOG0363|consen 173 HFAELAVDAVLRLKGSTNLEAIQIIKKLGGKLEDS-FLDEGFLLDKKIGV--------NQPKRIENAKILIANTPMDTDK 243 (527)
T ss_pred HHHHHHHHHHHHhcCCCCccceeeehhcCCccccc-cccccceeccccCC--------CCcccccccceEEecCCCcccc
Confidence 99999999999986543 2555799999999 89999999986432 3677899999999887632
Q ss_pred -----------CH-----------HHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCcccc
Q 009601 290 -----------NA-----------RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (531)
Q Consensus 290 -----------~~-----------~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~ 347 (531)
+. +.+.+.++++.+.|+|++|-.+-|.+...++|... +|++|....|
T Consensus 244 vKvfGarvrVds~~klaelE~AEkeKmK~KV~kI~~hgiN~FiNRQLiYnyPeqLf~da------gi~aIEHADF----- 312 (527)
T KOG0363|consen 244 VKVFGARVRVDSTAKLAELEKAEKEKMKEKVEKILKHGINVFINRQLIYNYPEQLFADA------GIMAIEHADF----- 312 (527)
T ss_pred eeeecceEeecchhHHHHHHHHHHHHHHHHHHHHHhcCCcEEeehhHhhcCHHHHHhhc------Ccceeecccc-----
Confidence 21 13567899999999999999999999999887664 6788887776
Q ss_pred chHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHH
Q 009601 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (531)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~ 424 (531)
+-+||++..|||.+++ ++++++...||+|+.++ +++|+++.|.|+.-
T Consensus 313 dGiERLalvtGGeI~S-----TFd~p~~~klG~C~~IeeimiGed~li~FSGv~~------------------------- 362 (527)
T KOG0363|consen 313 DGIERLALVTGGEIVS-----TFDNPELVKLGECDLIEEIMIGEDKLIKFSGVKL------------------------- 362 (527)
T ss_pred hhHHHHhhcccceeee-----ccCCcchhccccchhhHHHhcCccceeeeccccc-------------------------
Confidence 5678999999999999 69999999999999986 68999999999864
Q ss_pred HHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHH
Q 009601 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (531)
Q Consensus 425 ~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (531)
|..|||++||+|++++||.+|++|||||++...+++. +|.||||.||.+++.+.+++...++++. +++
T Consensus 363 ----------GeActIVlrGat~q~LDEaeRslHDALcVLaqtv~esrvv~GgG~sEm~Ma~av~~~A~~~pGkea-~Ai 431 (527)
T KOG0363|consen 363 ----------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKESRVVLGGGCSEMLMAKAVDKEAQETPGKEA-LAI 431 (527)
T ss_pred ----------ccceEEEEecccHHHHHHHHHHHHHHHHHHHHHhccceeeecCCcHHHHHHHHHHHHHhhCCchhh-HHH
Confidence 5689999999999999999999999999999999998 9999999999999999999999999987 899
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 504 DIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 504 ~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
.+|++||..+|.+||.|||+|+.+++.
T Consensus 432 eAfarAL~qlPtiiaDNaG~dsaelva 458 (527)
T KOG0363|consen 432 EAFARALRQLPTIIADNAGYDSAELVA 458 (527)
T ss_pred HHHHHHHHhcchhhhccCCCCHHHHHH
Confidence 999999999999999999999988763
No 38
>KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-65 Score=525.97 Aligned_cols=394 Identities=24% Similarity=0.327 Sum_probs=349.9
Q ss_pred cHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCc
Q 009601 71 DGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDG 150 (531)
Q Consensus 71 ~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDG 150 (531)
.+++...++++|++++++++|+|||+||||||+|++|++.+|||.+||+++++++||+ ||||++++++|+++.|||
T Consensus 24 ~e~~v~~ni~a~~ela~~~rs~yGpng~nK~vvnh~~k~~~TndaatIlrelev~HPa----akllv~a~~~q~~~iGDg 99 (537)
T KOG0362|consen 24 EEEAVIRNIAAVRELANVIRSAYGPNGRNKMVVNHLGKTFVTNDAATILRELEVEHPA----AKLLVEATQMQEEEIGDG 99 (537)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCCCCcceeeecccceEEEcCChHHHHHHhhccCcH----HHHHHHHHHHHHHhhCCC
Confidence 4788889999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccc-cCch-hhHHhhhhc-----cCChhhHhHHH
Q 009601 151 TTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKE-VEDS-ELADVAAVS-----AGNNYEVGNMI 223 (531)
Q Consensus 151 TTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~-v~~~-~l~~va~ts-----~~~~~~l~~li 223 (531)
|+++|+|+++||++|.++|..|++|.+|+.||+.|.+.+++.|+++... +.+. +...+++++ ..+++++++++
T Consensus 100 tnfvvvla~~LLe~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~~~d~~d~~~~~rs~i~skq~~~ed~l~~lV 179 (537)
T KOG0362|consen 100 TNFVVVLAGALLEQAEELIRMGLTPAEISEGYETATKEALEILPELVVQSIGDLEDKEWALRSVIMSKQYGNEDFLTKLV 179 (537)
T ss_pred ceEeehhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHhcccccChHHHHHHHHHHhhcchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997542 2222 223445543 34689999999
Q ss_pred HHHHHhhccCC-----c--eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc---------
Q 009601 224 AEAMSKVGRKG-----V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK--------- 287 (531)
Q Consensus 224 ~~A~~~v~~~g-----~--I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~--------- 287 (531)
++|+..+.+.+ . +.+..|++++|| .++.||+|.+. +++.+..-+.++|.++.||
T Consensus 180 a~ac~si~p~~~FnvdnIrVcKi~Gg~l~~S-~Vv~GmVfkr~---------~eG~v~~ak~arvAvf~cP~d~~~TEtk 249 (537)
T KOG0362|consen 180 AKACVSILPLMSFNVDNIRVCKILGGGLEDS-CVVCGMVFKRD---------PEGEVKSAKDARVAVFACPFDIAQTETK 249 (537)
T ss_pred HHHHHhhcccccccccceEEEEEecCCcccc-eeeEEEEeccc---------cCCcccccccceeEEEecCCCcccccCc
Confidence 99999998873 1 334699999999 89999999987 2344466678999999998
Q ss_pred ----cCCHHHHHH-----------HHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHH
Q 009601 288 ----ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDD 352 (531)
Q Consensus 288 ----i~~~~~l~~-----------~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ 352 (531)
|++++++++ .++.+...|++++++.+.+++.+|+++ |++ +|++++.++ +.+|.+
T Consensus 250 gTvLi~~A~el~~FSKgEe~lle~~vk~Ia~~gvkViV~~g~V~em~Lhfl--nky----~ImVlqi~S-----k~eLrr 318 (537)
T KOG0362|consen 250 GTVLLKNAKELLNFSKGEEALLEEQVKAIADAGVKVIVSGGKVDEMTLHFL--NKY----KIMVLQINS-----KFDLRR 318 (537)
T ss_pred ceeeecCcHhhhhhccccHHHHHHHHHHHHhcCCeEEEecCccchhhhhhh--ccc----cEEEEEecc-----HhhHHH
Confidence 677776654 477888899999999999999998864 543 899999988 899999
Q ss_pred HHHHhCCeEEecCCCccccCCCCCCCceeeEEE---EeCceEEEEcC-CCChhhHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 009601 353 IAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGD-GSTQDAVSKRVAQIRTLIENAEQDYEREKLNE 428 (531)
Q Consensus 353 ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~~~g-~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~e 428 (531)
+|+..||++.+ ++..+.++.+|+|++|. ++++.+++|.. ++.
T Consensus 319 lcrtvGA~~l~-----rl~~P~~~~lG~~d~V~~~EiG~~~v~vF~~e~~~----------------------------- 364 (537)
T KOG0362|consen 319 LCRTVGATALP-----RLFPPAPEELGYCDSVSTQEIGDTLVVVFRWESTG----------------------------- 364 (537)
T ss_pred HHHHcCCccch-----hccCCCCccccccceeeeeecCCceEEEEeeccCC-----------------------------
Confidence 99999999998 68899999999999986 46777777764 322
Q ss_pred HHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHH
Q 009601 429 RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVK 507 (531)
Q Consensus 429 Rl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a 507 (531)
++++||+|||+|+..+|+.||.++|++++.+..++++ ++||+|++|++|++.|.+++++++|.+| ++++.|+
T Consensus 365 ------~~~~TvVLRgst~s~LDd~ERAVddgV~tyK~l~~d~rLlpGagatEieLak~i~~~g~~~~Gl~q-~Aik~fa 437 (537)
T KOG0362|consen 365 ------TRVATVVLRGATQSILDDAERAVDDGVNTYKALCSDSRLLPGAGATEIELAKQISSRGATLPGLKQ-LAIKKFA 437 (537)
T ss_pred ------CceeEEEEcccchhhHHHHHHHHHHhHHHhhhhccCCccccCCchhHHHHHHHHHHhcccCCCcch-hHHHHHH
Confidence 4689999999999999999999999999999999998 9999999999999999999999999999 8999999
Q ss_pred HHHHHHHHHHHHHcCCCcccccc
Q 009601 508 RALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 508 ~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+||+.+|++|++|||+++.+|+.
T Consensus 438 ~Ale~~PktlaEnagl~~~evia 460 (537)
T KOG0362|consen 438 EALEVLPKTLAENAGLAVTEVIA 460 (537)
T ss_pred HHhccccHhHHHhcCCcHHHHHH
Confidence 99999999999999999999875
No 39
>KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-64 Score=512.77 Aligned_cols=400 Identities=23% Similarity=0.312 Sum_probs=355.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
+.+|..|..|+..++++|++||||-|+|||+++.+|++.+||||+|||+.+.++||+ +|+++++++.||+++||||
T Consensus 18 ~~vr~qnv~a~~~i~nivkss~GPvGldKmlvdd~Gdvt~TndgAtiL~~l~V~HPa----~KiLvelaq~qd~evgDgt 93 (545)
T KOG0360|consen 18 ERVRTQNVMAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILSLLEVEHPA----AKVLVELAQLQDEEVGDGT 93 (545)
T ss_pred hhhhhhhhHHHHHHHHHHHhccCccchhhhccccccceEEeccHHHHHHhhhhcchH----HHHHHHHHHhccccccCCc
Confidence 778888999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHh-cccccCch---hhHHhhhhccCC------hhhHhH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVEDS---ELADVAAVSAGN------NYEVGN 221 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~-~s~~v~~~---~l~~va~ts~~~------~~~l~~ 221 (531)
|+||+++++||+.+.+|+..++||+.|+.||+.|+..+++++.+ ++.+++.- .|.++++|++++ .++|++
T Consensus 94 tsvviia~eLl~~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~vd~lg~~~Lin~~ktsmsSK~i~~ds~~f~~ 173 (545)
T KOG0360|consen 94 TSVVIIAAELLKNADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPVDSLGTQILINLAKTSMSSKIIGMDSDFFTE 173 (545)
T ss_pred eEEEEEEHHhhhhHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeehhhcchHHHHHHHHhhhcceecccchHHHHH
Confidence 99999999999999999999999999999999999999999986 57777753 788999998643 589999
Q ss_pred HHHHHHHhhcc---CC---------ceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc--
Q 009601 222 MIAEAMSKVGR---KG---------VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-- 287 (531)
Q Consensus 222 li~~A~~~v~~---~g---------~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~-- 287 (531)
++++|+..+.- +| .|-+-+|.+..|| .++.|+.+.....+- .|+..+.|+||+++|+.
T Consensus 174 ~Vvda~l~v~~~~~~ge~~ypi~~vnILkahG~s~~eS-~l~~GyaLnc~~asq-------~m~~~i~~~Kiacld~~Lq 245 (545)
T KOG0360|consen 174 MVVDALLAVKILDINGEPHYPINSVNILKAHGKSQIES-MLLPGYALNCSVASQ-------MMPLRIKNAKIACLDFTLQ 245 (545)
T ss_pred HHHHHHHHHhhcccCCceeccccceeEEecCCccchhh-eeecceeeeccHhhh-------ccccccccceeeeEecccc
Confidence 99999998743 22 1334599999999 799999999876653 47888999999999985
Q ss_pred -----------cCCHHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCcc
Q 009601 288 -----------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (531)
Q Consensus 288 -----------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~ 345 (531)
+.+++++ ++.++++...|+|+|+++++|||.++.+|+.. +++||+ +.
T Consensus 246 k~km~lGv~vvv~dp~kle~ir~~e~~itkeRi~kIl~~ganvVLtt~gIddmc~K~~vea------gamAVr-----R~ 314 (545)
T KOG0360|consen 246 KTKMKLGVQVVVDDPEKLEQIRQREQDITKERIKKILATGANVVLTTGGIDDMCLKYFVEA------GAMAVR-----RC 314 (545)
T ss_pred cccccccceEEEcChHHHHHHHHHHhHhHHHHHHHHHhcCCcEEEEcCCccHHHHHHHHHc------chhhhH-----HH
Confidence 3555543 33578999999999999999999999999987 456555 77
Q ss_pred ccchHHHHHHHhCCeEEecCCCccc-cCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHH
Q 009601 346 KSQYLDDIAILTGGTVIRDEVGLAL-DKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (531)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~l-~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~ 421 (531)
++.+|++|+++||++++++..+++- +.+++..+|+|+.|. +++|+++++.+.+.
T Consensus 315 ~k~dlk~iakatGat~~sSla~l~geetf~~~~lG~a~evvqeri~dde~ilikg~ka---------------------- 372 (545)
T KOG0360|consen 315 KKEDLKRIAKATGATLLSSLANLEGEETFEPASLGSADEVVQERIGDDELILIKGTKA---------------------- 372 (545)
T ss_pred HHHHHHHHHHhhCCeeeehhhccccccccChhhccchhHHHHHhcccceeEEeccCcc----------------------
Confidence 8999999999999999997554433 356788999999986 67999999987643
Q ss_pred HHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHH
Q 009601 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (531)
Q Consensus 422 e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (531)
..|+|++||++++.+||.+|++|||+|++|..++++ +||||||+|.+|+-+|+.++.+..++||
T Consensus 373 --------------~~aSiILrgaNd~~~DEmers~hdaL~VlkrtLes~~vvpGGG~vE~aLs~yle~~a~s~~srE~- 437 (545)
T KOG0360|consen 373 --------------TSASIILRGANDFMLDEMERSLHDALCVLKRTLESKSVVPGGGAVETALSIYLENFATSVGSREQ- 437 (545)
T ss_pred --------------ceeeEEEecCCcccHhhhccchhhHHHHHHHHhccCccccCccHHHHHHHHHHHhhcccCccHHH-
Confidence 379999999999999999999999999999999999 9999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 009601 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSEK 531 (531)
Q Consensus 501 ~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~k 531 (531)
+++.-|++||.++|++|+-||+.|+.+++.+
T Consensus 438 laiaefa~all~ipktla~naa~Dstelvt~ 468 (545)
T KOG0360|consen 438 LAIAEFAAALLSIPKTLAVNAAKDSTELVTK 468 (545)
T ss_pred HHHHHHHHHHhcchHHHhhhhcccccccccc
Confidence 7889999999999999999999999998754
No 40
>KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.7e-60 Score=477.21 Aligned_cols=390 Identities=19% Similarity=0.275 Sum_probs=351.3
Q ss_pred HHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCccchHH
Q 009601 76 KKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSV 155 (531)
Q Consensus 76 ~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGTTtvv 155 (531)
..|+++.++++|+++|||||+.|-||+.++.|.+..||||..||++|++.||+ |+-+.+++.+||+++|||||||+
T Consensus 22 ~~ni~aak~iadvirtclgp~am~kmlld~~g~i~~tndg~ailrei~Vahpa----aksmiel~rtqdeevgdgttsvi 97 (527)
T KOG0364|consen 22 LGNIQAAKAIADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGTTSVI 97 (527)
T ss_pred ccchhhHHHHHHHHHHhcChHHHHHHhhccCCceEEecCcHHHHHHHhhcCcc----hhhHhhhhhcccccccCCceeee
Confidence 34688999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch---hhHHhhhhcc------CChhhHhHHHHHH
Q 009601 156 VLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS---ELADVAAVSA------GNNYEVGNMIAEA 226 (531)
Q Consensus 156 vLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~---~l~~va~ts~------~~~~~l~~li~~A 226 (531)
+|++|+|.++..++++|+||+.|++.|.+|++.++..+++++.+++.+ .+..+..++. .+.+.++++..+|
T Consensus 98 ~lagE~L~~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~d~~~~~km~~vi~~~v~tk~~~~~~~~~~~lal~a 177 (527)
T KOG0364|consen 98 ILAGEMLNVAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPVDVKDQAKMLRVINSSVGTKFNSRWSDLICNLALDA 177 (527)
T ss_pred eehHHHhhhcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccCCcccHHHHHhhhhhhhhhhhhhhhcchhhhHHHHH
Confidence 999999999999999999999999999999999999999988877643 6777777664 3577899999999
Q ss_pred HHhhccC-Cc---------eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCC------
Q 009601 227 MSKVGRK-GV---------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITN------ 290 (531)
Q Consensus 227 ~~~v~~~-g~---------I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~------ 290 (531)
+++++.+ |. +.+.+|+.++|| ++++|+.+.+...||. |...++||+|+++||++..
T Consensus 178 vk~V~~~~g~e~dik~y~kveKvpgg~l~~s-~vl~Gv~~nkdv~Hpk-------mrr~IenprivLlD~~LeykkGeSq 249 (527)
T KOG0364|consen 178 VKTVGVENGREIDIKRYAKVEKVPGGLLEDS-CVLKGVMINKDVTHPK-------MRRAIENPRIVLLDCPLEYKKGESQ 249 (527)
T ss_pred HHHhhhccCceechhhhccccccCccccccc-ceecceeeccccCcHH-------HHHHhhcCcEEEecCCccCCCCccc
Confidence 9999875 32 223699999999 8999999999999984 6778999999999998632
Q ss_pred ------------------HHHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHH
Q 009601 291 ------------------ARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDD 352 (531)
Q Consensus 291 ------------------~~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ 352 (531)
.+++..+++.+.....++|++.+++++.+.++|.++++ .+++++|+.+-.+
T Consensus 250 tnve~~~eed~~r~Lqieee~v~~mc~~Ii~v~pDlVitekG~sdla~hyl~k~~i-----------T~~rr~rKtDn~r 318 (527)
T KOG0364|consen 250 TNVEIVKEEDFTRILQIEEEQVQAMCEVIIAVKPDLVITEKGVSDLAQHYLLKANI-----------TAIRRLRKTDNNR 318 (527)
T ss_pred cceeeeechhHHHHHHhhHHHHHHHHHHHHeecccEEEeccchhHHHHHHHHhcCc-----------hhhhhhhccccch
Confidence 12345677888899999999999999999999998865 4667899999999
Q ss_pred HHHHhCCeEEecCCCccccCCCCCCCce-eeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 009601 353 IAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNE 428 (531)
Q Consensus 353 ia~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~e 428 (531)
|+++||+++++ +.+++.+.+.|+ |+-+++ ++++|+||..|.+|
T Consensus 319 ia~acga~iv~-----rpedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck~p---------------------------- 365 (527)
T KOG0364|consen 319 IARACGARIVN-----RPEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCKEP---------------------------- 365 (527)
T ss_pred hhhhcCceecc-----ChhhCchhccCcccceeeeeccCchhhhhhhhcCCC----------------------------
Confidence 99999999999 689999999996 777775 68899999999886
Q ss_pred HHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHH
Q 009601 429 RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVK 507 (531)
Q Consensus 429 Rl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a 507 (531)
+.|||++||+|..+++|.+|.+.||+.++|+.+-++ ++||||++||.+|+.|.+.+....+.+| -.+.+++
T Consensus 366 -------kaCtillrg~skdil~e~ernlqda~~varn~ii~PklvPGGGAtEMAvs~~L~qksa~~~GVek-wPY~Ava 437 (527)
T KOG0364|consen 366 -------KACTILLRGPSKDILNEVERNLQDAMGVARNVIINPKLVPGGGATEMAVSHELRQKSALMTGVEK-WPYGAVA 437 (527)
T ss_pred -------cceEEEeccCchhHHHHHHHHhhhHHHHHHHhccCCcccCCccHHHHHHHHHHHHHHhhccchhc-cchhhhh
Confidence 589999999999999999999999999999999999 9999999999999999998777888777 7899999
Q ss_pred HHHHHHHHHHHHHcCCCccccc
Q 009601 508 RALCYPLKLIAKNAGVNGSVVS 529 (531)
Q Consensus 508 ~AL~~ip~~L~~NaG~d~~~v~ 529 (531)
.||+.+||+|++|+|.|+..++
T Consensus 438 ~AlEviPrtliqncGan~Ir~l 459 (527)
T KOG0364|consen 438 GALEVIPRTLIQNCGANPIRAL 459 (527)
T ss_pred cCceeccHHHHhhcCccHHHHH
Confidence 9999999999999999987654
No 41
>KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-56 Score=449.35 Aligned_cols=392 Identities=23% Similarity=0.372 Sum_probs=343.8
Q ss_pred HHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCccch
Q 009601 74 AMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTT 153 (531)
Q Consensus 74 a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGTTt 153 (531)
+...|+.+..-+.+.+++.+||+|..||++++.|++++|+||.+.+++|+++||. |-++..++..||+..||||||
T Consensus 18 al~iNis~AigLqsV~~snlgPkgt~KmlvsgagdIklakdgnvLl~emQiqhPT----a~lIakaatAqdd~tGDGttS 93 (520)
T KOG0359|consen 18 ALALNISAAIGLQSVLVLNLGPKGTEKMLVSGAGDIKLAKDGNVLLKEMQIQHPT----ASLIAKVATAQDDITGDGTTS 93 (520)
T ss_pred ceeeccccccceeeeehhccCchhHHHhccCCccceEEEecchhhHHHHhhcCch----HHHHHHHHHHhhcccCCCcce
Confidence 5556778888899999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCchhhHHhhhhccCC------hhhHhHHHHHHH
Q 009601 154 SVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGN------NYEVGNMIAEAM 227 (531)
Q Consensus 154 vvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~~l~~va~ts~~~------~~~l~~li~~A~ 227 (531)
+|+|.++|+++|..++..|+||..|..||+.|.+.++++|+..+.+++.+.|..+++|+++. -+.+++++++|+
T Consensus 94 ~VlligEllkqa~~~i~eGlhprii~~gfe~a~~~~l~~L~k~~~~~~~~~L~~va~tsl~Tkv~~~la~~lt~~vv~aV 173 (520)
T KOG0359|consen 94 VVLLIGELLKQADRYISEGLHPRIITEGFEAAKNKALEFLEKVSREVDRETLKDVARTSLRTKVHAELADVLTPIVVDSV 173 (520)
T ss_pred EEEeeHHHHHHHHHHhhcCCCcchhhhHHHHHHHHHHhhhhccccchhHHHHHHHHHHhhcCcccHHHHhHhHHHHHhhh
Confidence 99999999999999999999999999999999999999999887777765899999999875 377889999999
Q ss_pred Hhhcc-CCceE-----e--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccC----------
Q 009601 228 SKVGR-KGVVT-----L--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT---------- 289 (531)
Q Consensus 228 ~~v~~-~g~I~-----v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~---------- 289 (531)
..+.+ ++.|. + -.-.+..|+ .+++|+++|+|-.||- |+..++|++||+++..+.
T Consensus 174 l~i~~~~~~idl~mveim~mq~~s~~dT-~~v~glvLdhg~rHpd-------mp~~~e~a~iL~~NvSLEYEK~Einsgf 245 (520)
T KOG0359|consen 174 LCIRRQEEPIDLFMVEIMEMQHKSLHDT-SLVQGLVLDHGARHPD-------MPRRVEDAYILICNVSLEYEKPEINSGF 245 (520)
T ss_pred eeeccCCCCcchhHHHhhhhccCchhhh-HHhhhhhccCCCCCcc-------cccchhceEEEEeeccccccccccccch
Confidence 98873 33221 1 244566677 7999999999999984 888999999999997643
Q ss_pred ---CHHH-----------HHHHHHHHHhcCC---CEE-EEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHH
Q 009601 290 ---NARD-----------LINVLEDAIRGAY---PIL-IIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLD 351 (531)
Q Consensus 290 ---~~~~-----------l~~~le~i~~~g~---~lv-I~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~ 351 (531)
+++| +.+.+.++++.+. .+| |.+++||+..|+.|.+++ |+ +.++.++..||
T Consensus 246 fYsta~ere~L~~~eR~Fi~~r~~kiielk~~vc~fvvinqkGidp~sld~~a~~g------Il-----aLRRAKRRNmE 314 (520)
T KOG0359|consen 246 FYSTAEEREVLVLAERKFIDQRVRKIIELKRKVCEFVVINQKGIDPTSLDSLAKSG------IL-----ALRRAKRRNME 314 (520)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcceEEEecccCCCCCcchhhhhcc------hH-----HHHHHhhhhHH
Confidence 2222 1223455555443 344 557899999999998874 34 45577899999
Q ss_pred HHHHHhCCeEEecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 009601 352 DIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNE 428 (531)
Q Consensus 352 ~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~e 428 (531)
|+..+|||..+. ++++++|+.||+|+.|+ +++++|||+++|.+|
T Consensus 315 RL~lacGG~a~n-----svddLtp~~LG~aglVye~tlGEEkfTFIE~~~~p---------------------------- 361 (520)
T KOG0359|consen 315 RLVLACGGEAVN-----SVDDLTPDYLGYAGLVYEYTLGEEKFTFIEKCNNP---------------------------- 361 (520)
T ss_pred HHHHhhccceec-----ccccCChhhccccceeEEeeccceeeEeeecCCCC----------------------------
Confidence 999999999998 69999999999999997 479999999999986
Q ss_pred HHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHH
Q 009601 429 RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVK 507 (531)
Q Consensus 429 Rl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a 507 (531)
+.|||+++||+.+.+-++|++++|++++++++++++ ++||+|++|.+++.+|+...++.+++.+ +|+++|+
T Consensus 362 -------~S~TiLikgpnkht~tQikdairdglrav~ntl~d~~~i~Gaga~~va~~~~lr~~k~~vkgra~-~g~~afa 433 (520)
T KOG0359|consen 362 -------SSVTILIKGPNKHTITQIKDAIRDGLRAVKNTLEDKCGIPGAGAFEVALGRHLRESKKSVKGRAY-LGVKAFA 433 (520)
T ss_pred -------cceEEEEeCCccchHHHHHHHHhhHHHHHHHHhhhcccccCchHHHHHHHHHHHHhhhccCchhh-hhHHHHH
Confidence 589999999999999999999999999999999999 9999999999999999988888888887 8999999
Q ss_pred HHHHHHHHHHHHHcCCCccccc
Q 009601 508 RALCYPLKLIAKNAGVNGSVVS 529 (531)
Q Consensus 508 ~AL~~ip~~L~~NaG~d~~~v~ 529 (531)
+||..+|++|++|+|+|+.+.+
T Consensus 434 ~all~ipk~La~nsg~D~qe~l 455 (520)
T KOG0359|consen 434 NALLVIPKTLAKNSGLDEQETL 455 (520)
T ss_pred hhhhhhhHHHHHhcCCchHHHH
Confidence 9999999999999999998765
No 42
>KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.2e-54 Score=424.95 Aligned_cols=314 Identities=25% Similarity=0.330 Sum_probs=290.5
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHH
Q 009601 58 PKIYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVR 137 (531)
Q Consensus 58 ~~~~~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~ 137 (531)
+|-.-.|...|| -++.++++-+..++++++++|+||+|++|++..+.|++.+|||| .|+. ++++.
T Consensus 15 LrDQd~~~Ri~G--~ea~Ks~I~agkaVA~~lrtSLGPkGlDK~l~~pdgditvtndg---------d~~I----akLmv 79 (400)
T KOG0357|consen 15 LRDQERKDRLFG--LDAVKSHIGAAKAVARILRTSLGPKGLDKMLVSPDGDITVTNDG---------VHQI----AKLIV 79 (400)
T ss_pred eeeccCCchhhH--HHHhhhhhHHHHHHHHHHHhhcCccccccccccCCCCceeeecc---------chHH----HHHHH
Confidence 333335666777 89999999999999999999999999999999999999999999 6787 99999
Q ss_pred HHHhhcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCchhhHHhhhhccCChh
Q 009601 138 QAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGNNY 217 (531)
Q Consensus 138 ~~a~~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~~l~~va~ts~~~~~ 217 (531)
..+..|+.++|||||.+++|++.+++++.+++..|+||..|..||+.+.+.++++|++.+.+++
T Consensus 80 ~LS~sqd~eIgdGtTgVvvLa~alleqa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~e---------------- 143 (400)
T KOG0357|consen 80 ILSKSQDDEIGDGTTGVVVLAGALLEQAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPFE---------------- 143 (400)
T ss_pred HhcccchhhhccCCcccEEecccchHhHHhhcccccchhHHHHhhhhHHHhhhhhhhhhccccc----------------
Confidence 9999999999999999999999999999999999999999999999999999999988765532
Q ss_pred hHhHHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHH
Q 009601 218 EVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINV 297 (531)
Q Consensus 218 ~l~~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~ 297 (531)
+.++
T Consensus 144 ----------------------------------------------------------------------------f~em 147 (400)
T KOG0357|consen 144 ----------------------------------------------------------------------------FEEM 147 (400)
T ss_pred ----------------------------------------------------------------------------HHHH
Confidence 5567
Q ss_pred HHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCC
Q 009601 298 LEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEV 377 (531)
Q Consensus 298 le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~ 377 (531)
++.+++.|.+++||+|++||||.++|..|++ |..+|+...++|-||++|||+++. ++++++++.
T Consensus 148 i~~vK~~ga~l~icqwgfddeanhll~~n~l-----------pavrwVGGpEiEliAiaT~grIVp-----rF~eL~~~k 211 (400)
T KOG0357|consen 148 IQQIKETGANLAICQWGFDDEANHLLLQNNL-----------PAVRWVGGPEIELIAIATGGRIVP-----RFSELTAEK 211 (400)
T ss_pred HHHHHhhCCcEEEEecccCchhhhHHhhcCC-----------CceeecCCcceEEEEeecCCeeec-----cHhhhCHhh
Confidence 8899999999999999999999999999976 777788899999999999999999 799999999
Q ss_pred CceeeEEEE-----eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHH
Q 009601 378 LGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKE 452 (531)
Q Consensus 378 lG~~~~v~i-----~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E 452 (531)
||+++.|.. ++|++.+++.|++. +..||.+||++..+++|
T Consensus 212 LG~aglVrE~sfgttkdkmlviEqc~ns-----------------------------------kaVTifvRg~Nkmii~E 256 (400)
T KOG0357|consen 212 LGFAGLVREISFGTTKDKMLVIEQCKNS-----------------------------------KAVTIFVRGGNKMIIEE 256 (400)
T ss_pred ccccceEEEEecccccceEEEEEecCCC-----------------------------------ceEEEEEecCcceeHHH
Confidence 999998863 38899999999874 58899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 453 KKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 453 ~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
.||++|||||++|+.++|. +|+|||++|+.||-++.+.+.++++.|| |++.+|++||++||..||+|+|++|++.+.
T Consensus 257 akrslhdalCvirnlird~rivYgGGaaEiscslav~~ead~~~g~eq-ya~rafa~ale~ipmalaensgl~pi~~ls 334 (400)
T KOG0357|consen 257 AKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKIPGIEQ-YAFRAFADALESIPMALAENSGLDPIETLS 334 (400)
T ss_pred HHHHhhhhHHHHHHHhhcCeeEecCchHHhhhhhHhhHhhccCCcHHH-HHHHHHHHHHhhcchhhhhccCCCchhhhh
Confidence 9999999999999999998 9999999999999999999999999999 799999999999999999999999987653
No 43
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=99.96 E-value=3.5e-28 Score=236.42 Aligned_cols=191 Identities=37% Similarity=0.482 Sum_probs=168.3
Q ss_pred hhHHhhhhccC-----ChhhHhHHHHHHHHhhcc------CCceE--eecCCCccceeEEEeeeEEeecccCCccccCcc
Q 009601 204 ELADVAAVSAG-----NNYEVGNMIAEAMSKVGR------KGVVT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSE 270 (531)
Q Consensus 204 ~l~~va~ts~~-----~~~~l~~li~~A~~~v~~------~g~I~--v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~ 270 (531)
.|.++|+|+++ +++.+++++++|+..+++ .+.|. ..+|+++.|| ++++|++|+++|.+|+
T Consensus 3 ~l~~ia~ts~~sk~~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds-~li~Gv~~~~~~~~~~------ 75 (209)
T cd03333 3 LLLQVATTSLNSKLSSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDS-ELVVGVVFDKGYASPY------ 75 (209)
T ss_pred HHHHHHHHHhccchhhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhc-eeEeeEEEeccccCCC------
Confidence 47889999988 789999999999999987 34444 4699999999 8999999999999986
Q ss_pred cCeeeccceeEeeeccccCCHHHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchH
Q 009601 271 KMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYL 350 (531)
Q Consensus 271 ~~~~~~~~~kIll~d~~i~~~~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L 350 (531)
|+..++||+|++++++|+. +|+++++|++.++++|..+ +|+||+. +++++|
T Consensus 76 -m~~~~~n~~Ill~~~~le~-----------------vii~~~~I~~~al~~l~~~------~I~~v~~-----~~~~~l 126 (209)
T cd03333 76 -MPKRLENAKILLLDCPLEY-----------------VVIAEKGIDDLALHYLAKA------GIMAVRR-----VKKEDL 126 (209)
T ss_pred -CCeEcCCCcEEEEeCCeeE-----------------EEEecCcccHHHHHHHHHC------CCEEEEe-----CCHHHH
Confidence 5778999999999999887 8888888999999999875 5788874 568999
Q ss_pred HHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHH
Q 009601 351 DDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLN 427 (531)
Q Consensus 351 ~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~ 427 (531)
+|||++|||++++ ++++++++.||+|+++++. ++.++++.+|..
T Consensus 127 ~~ia~~tga~ii~-----~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~---------------------------- 173 (209)
T cd03333 127 ERIARATGATIVS-----SLEDLTPEDLGTAELVEETKIGEEKLTFIEGCKG---------------------------- 173 (209)
T ss_pred HHHHHHHCCEEec-----ccccCChhhceeeeEEEEEEECCeEEEEEEcCCC----------------------------
Confidence 9999999999999 5888889999999999874 456888888764
Q ss_pred HHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHc
Q 009601 428 ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEE 470 (531)
Q Consensus 428 eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~ 470 (531)
+..|||+|||+|+.+++|.||+++||++++++++++
T Consensus 174 -------~~~~tIllrG~t~~~l~e~kr~l~dal~~~~~~~~~ 209 (209)
T cd03333 174 -------GKAATILLRGATEVELDEVKRSLHDALCAVRAAVEE 209 (209)
T ss_pred -------CCEEEEEEECCCHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 368999999999999999999999999999999874
No 44
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=99.95 E-value=1.3e-26 Score=232.66 Aligned_cols=199 Identities=19% Similarity=0.168 Sum_probs=168.2
Q ss_pred ChhhHhHHHHHHHHhhccC----------Cce--EeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009601 215 NNYEVGNMIAEAMSKVGRK----------GVV--TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (531)
Q Consensus 215 ~~~~l~~li~~A~~~v~~~----------g~I--~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIl 282 (531)
+.++|++++++|+..+.++ ..| .+.+|++++|| ++++|++|++++.++ .|+..++||+|+
T Consensus 19 ~~~~ls~l~v~Av~~v~~~~~~~~~~di~~~I~I~ki~Ggs~~dS-~li~Gvvi~k~~~~~-------~m~~~i~n~kIl 90 (261)
T cd03334 19 WLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIPGGSPSDS-EVVDGVVFTKNVAHK-------RMPSKIKNPRIL 90 (261)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCccChhHceEEEEecCCCHHHc-EEEeeEEEeCCCCCc-------cCCcccCCCcEE
Confidence 4789999999999998632 123 34699999999 999999999997775 478889999999
Q ss_pred eeccccCCH------H-----------HHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCcc
Q 009601 283 LVDKKITNA------R-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (531)
Q Consensus 283 l~d~~i~~~------~-----------~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~ 345 (531)
+++++|... . .+.++++++++.|+++|+++++|++.++++|.++ +|++|+ ++
T Consensus 91 ll~~~Le~~~~~~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nvIl~~k~I~~~a~~~l~k~------gI~~v~-----~v 159 (261)
T cd03334 91 LLQGPLEYQRVENKLLSLDPVILQEKEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEA------GITLVL-----NV 159 (261)
T ss_pred EEeeeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccCHHHHHHHHHC------CCEEEE-----ec
Confidence 999987432 1 2456789999999999999999999999999886 457776 55
Q ss_pred ccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eC-----ceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 009601 346 KSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TK-----DTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (531)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~-----~~~~~~~g~~~~~~i~~ri~~l~~~l~~~ 417 (531)
++.+|++||++|||+++++ -.+.++++.||+|+.|++ ++ +++++|.+|..+
T Consensus 160 ~~~dl~rIa~~tGa~ii~~----i~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~~----------------- 218 (261)
T cd03334 160 KPSVLERISRCTGADIISS----MDDLLTSPKLGTCESFRVRTYVEEHGRSKTLMFFEGCPKE----------------- 218 (261)
T ss_pred CHHHHHHHHHHhCCEEecC----hhhhcCcccCcCcceEEEEEecCcCCCceeEEEEecCCCC-----------------
Confidence 6899999999999999983 034788899999999985 33 589999998753
Q ss_pred hhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC
Q 009601 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 471 (531)
Q Consensus 418 ~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g 471 (531)
..+||+|||+|++.++|.||+++||+++++++..++
T Consensus 219 ------------------~~~TIlLRG~t~~~lde~eR~i~Dal~v~~~~~le~ 254 (261)
T cd03334 219 ------------------LGCTILLRGGDLEELKKVKRVVEFMVFAAYHLKLET 254 (261)
T ss_pred ------------------ceeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 589999999999999999999999999999998876
No 45
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=99.17 E-value=2.2e-10 Score=132.44 Aligned_cols=208 Identities=18% Similarity=0.210 Sum_probs=165.7
Q ss_pred ChhhHhHHHHHHHHhhccC----------Cc--eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009601 215 NNYEVGNMIAEAMSKVGRK----------GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (531)
Q Consensus 215 ~~~~l~~li~~A~~~v~~~----------g~--I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIl 282 (531)
|.+.+..|+.+|...+.++ +. |+.+.||+..|| +++.|+++.+...+ +.|..++++|+|+
T Consensus 333 W~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~~dS-~vi~Gvv~sKn~~~-------k~M~~~~e~pril 404 (1598)
T KOG0230|consen 333 WLDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSRVDS-EVIKGVVCSKNVAH-------KRMATKYENPRIL 404 (1598)
T ss_pred HHHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCcccc-eeeeEEEeecchhh-------hhhhhhccCCceE
Confidence 4577889999999988775 12 445799999999 99999999998665 4577889999999
Q ss_pred eeccccC---------CHH--------HHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCcc
Q 009601 283 LVDKKIT---------NAR--------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (531)
Q Consensus 283 l~d~~i~---------~~~--------~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~ 345 (531)
++.+++. +.+ .+...+.++.....+++++.++|++.|..+|... |+.-+. ++
T Consensus 405 ll~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~vllVeksVS~~aqe~L~~k---~I~lvl--------nv 473 (1598)
T KOG0230|consen 405 LLGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPDVLLVEKSVSRIAQELLLDK---GISLVL--------NV 473 (1598)
T ss_pred EEecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCCeEEEechHHHHHHHHhhcc---CeEEEE--------ec
Confidence 9988642 222 2345677888889999999999999999988653 433333 66
Q ss_pred ccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEe--------CceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 009601 346 KSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT--------KDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (531)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~--------~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~ 417 (531)
++..|+||+++||+.|+. +++.++...||+|..+++. .+.++||+||..+
T Consensus 474 K~s~leRIsR~tga~I~~-----siDslt~~klg~C~~F~v~~~~e~hk~sKTlmffegc~~~----------------- 531 (1598)
T KOG0230|consen 474 KRSLLERISRCTGADIVP-----SVDSLTSQKLGYCELFRVENYVEEHKPSKTLMFFEGCPKP----------------- 531 (1598)
T ss_pred cHHHHHHHHHHhcCceec-----chhhhhccccCCCccHhhhhhhhcccchhhhHHhhcCCCC-----------------
Confidence 789999999999999998 5888999999999999763 2356788998764
Q ss_pred hhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHH-HHcCeeccCchhHh
Q 009601 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA-VEEGIVVGGGCTLL 481 (531)
Q Consensus 418 ~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a-~~~gvVpGGGa~el 481 (531)
.-|||++||.+..++++.|+-++-++-++-+. ++.-++.--|+...
T Consensus 532 ------------------lG~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~asi~ 578 (1598)
T KOG0230|consen 532 ------------------LGCTILLRGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGASIS 578 (1598)
T ss_pred ------------------CCceEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCccc
Confidence 35799999999999999999999999888554 55557777777544
No 46
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=97.36 E-value=0.00029 Score=77.73 Aligned_cols=88 Identities=23% Similarity=0.248 Sum_probs=71.1
Q ss_pred HHHHHHHHHhcCCC-EEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchH-HHHHHHhCCeEEecCCCcccc
Q 009601 294 LINVLEDAIRGAYP-ILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYL-DDIAILTGGTVIRDEVGLALD 371 (531)
Q Consensus 294 l~~~le~i~~~g~~-lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L-~~ia~~tGa~ii~~~~~~~l~ 371 (531)
+..+++.+.+.|.+ +++++++|+|.++++|..+. |.+ .+++.++++ ++|+.+|||++++ .++
T Consensus 259 l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~------Ilt-----~~~v~~~dl~~~l~~~~ga~~v~-----~~~ 322 (524)
T COG0459 259 LATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIA------ILT-----GRRVKKEDLGERLAKLGGAKIVS-----VLK 322 (524)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhc------cee-----cceecchhhHHHHHHccCceEEe-----ecc
Confidence 45567888899999 88999999999999998763 444 446668888 7999999999998 588
Q ss_pred CCCCCCCce--eeEEEE---eCceEEEEcCC
Q 009601 372 KVGKEVLGN--ASKVVL---TKDTTTIVGDG 397 (531)
Q Consensus 372 ~~~~~~lG~--~~~v~i---~~~~~~~~~g~ 397 (531)
++++..+|. |+.|+. ++++++++.++
T Consensus 323 d~t~~~~G~~~~~~ve~~~~~~~~~~~~~~~ 353 (524)
T COG0459 323 DLTTIVLGEGAAGLVEETKTGDYDMEKLQER 353 (524)
T ss_pred cCceeecCccccceEEEeeccchhhhhhhhh
Confidence 999999999 999974 34555555554
No 47
>smart00574 POX domain associated with HOX domains.
Probab=56.80 E-value=78 Score=28.91 Aligned_cols=60 Identities=22% Similarity=0.236 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHc-CeeccCchhHhHHHHHHHHHh
Q 009601 419 QDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEE-GIVVGGGCTLLRLSSKVDAIK 491 (531)
Q Consensus 419 ~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~-gvVpGGGa~el~ls~~L~~~~ 491 (531)
+..|+..++.+.++| ..+++|.+++++-...-++.++.. ..|+|.|++-.+.+-+|+..+
T Consensus 68 s~~~r~e~q~kk~kL-------------l~mL~eVd~RY~qY~~qmq~v~ssFe~vaG~g~a~~yt~lAl~a~S 128 (140)
T smart00574 68 STAERQELQRKKAKL-------------LSMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTIS 128 (140)
T ss_pred chhHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 345666777777766 346777777777777666666655 378999999988888887665
No 48
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=50.76 E-value=5 Score=44.67 Aligned_cols=61 Identities=26% Similarity=0.412 Sum_probs=50.7
Q ss_pred cCCCEEEEeccchH-----HHHHHHHHHhhcccc----eEEEeecCCcCccccchHHHHHHHhCCeEEecC
Q 009601 304 GAYPILIIAEDIEQ-----EALATLVVNKLRGAL----KIAALKAPGFGERKSQYLDDIAILTGGTVIRDE 365 (531)
Q Consensus 304 ~g~~lvI~~~~I~~-----~al~~L~~n~~~g~~----~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~ 365 (531)
...++.|..+++++ +++..++.++++++. ++++++.| +++...++|++.+++++.++..++
T Consensus 246 ~~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~-i~d~~~~~L~~~~I~~~~~v~~~d 315 (522)
T TIGR02345 246 EKDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLP-IGDLATQYFADHNIFCAGRVSDED 315 (522)
T ss_pred cccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCC-ccHHHHHHHHHCCcEEEecCCHHH
Confidence 34478888888888 888888888888755 89999988 999999999999999998887653
No 49
>PF07526 POX: Associated with HOX; InterPro: IPR006563 This domain in found exclusively in plant proteins, associated with HOX domains which may suggest these proteins are homeodomain transcription factors.
Probab=43.12 E-value=1.4e+02 Score=27.23 Aligned_cols=58 Identities=26% Similarity=0.284 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHc-CeeccCchhHhHHHHHHHHHh
Q 009601 421 YEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEE-GIVVGGGCTLLRLSSKVDAIK 491 (531)
Q Consensus 421 ~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~-gvVpGGGa~el~ls~~L~~~~ 491 (531)
-++..++.+.++| -.+++|.+++++-...-++..+.. .-|.|.|++-.+.+-+|+..+
T Consensus 70 ~~~~e~q~kK~KL-------------l~mL~eVd~RY~qY~~Qmq~VvssFe~vaG~gaA~~YtalAlqamS 128 (140)
T PF07526_consen 70 AERQELQRKKAKL-------------LSMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAAPYTALALQAMS 128 (140)
T ss_pred hhHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHHHHHHHH
Confidence 3555555566665 245666666666555555555444 258899999999888888765
No 50
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=34.72 E-value=1.9e+02 Score=24.12 Aligned_cols=55 Identities=16% Similarity=0.160 Sum_probs=33.3
Q ss_pred HHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCe
Q 009601 296 NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT 360 (531)
Q Consensus 296 ~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ 360 (531)
+-++.+.+....+|++++|+++.....+..---+-.++++ ..| .+++|.++||..
T Consensus 20 qt~Kai~kg~~~~v~iA~Da~~~vv~~l~~lceek~Ip~v--~V~--------s~~~LGkAcgi~ 74 (84)
T PRK13600 20 ETLKALKKDQVTSLIIAEDVEVYLMTRVLSQINQKNIPVS--FFK--------SKHALGKHVGIN 74 (84)
T ss_pred HHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEE--EEC--------CHHHHHHHhCCC
Confidence 3455666667789999999998776644321111112333 222 357788888765
No 51
>COG1433 Uncharacterized conserved protein [Function unknown]
Probab=31.41 E-value=1.4e+02 Score=26.63 Aligned_cols=38 Identities=24% Similarity=0.340 Sum_probs=28.5
Q ss_pred HHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCC
Q 009601 297 VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPG 341 (531)
Q Consensus 297 ~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~ 341 (531)
+.+.+++.|+++||+. .+.+-+++.|... .|-+++.++
T Consensus 57 ~a~~l~~~gvdvvi~~-~iG~~a~~~l~~~------GIkv~~~~~ 94 (121)
T COG1433 57 IAELLVDEGVDVVIAS-NIGPNAYNALKAA------GIKVYVAPG 94 (121)
T ss_pred HHHHHHHcCCCEEEEC-ccCHHHHHHHHHc------CcEEEecCC
Confidence 5778889999999966 7888888887654 345566665
No 52
>KOG1593 consensus Asparaginase [Amino acid transport and metabolism]
Probab=22.75 E-value=1.3e+02 Score=30.56 Aligned_cols=57 Identities=23% Similarity=0.304 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHcC---eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcC
Q 009601 454 KLRVEDALNATKAAVEEG---IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAG 522 (531)
Q Consensus 454 ~~~i~Dal~a~k~a~~~g---vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG 522 (531)
-|+|.||+++++..++.- ++.|-|++...-+.-+.. +.+...|. -+....+.++||-
T Consensus 105 lrrIkdai~vA~~Vleht~HTlLvGe~At~FA~smGf~~--e~Lst~es----------~~~~s~W~~~nCQ 164 (349)
T KOG1593|consen 105 LRRIKDAIRVARHVLEHTQHTLLVGESATAFANSMGFKE--EDLSTEES----------KSWWSDWKAENCQ 164 (349)
T ss_pred HHHHHHHHHHHHHHHhhhheeeeecccHHHHHHhcCCCc--cccCCHHH----------HHHHHHHHHhcCC
Confidence 488999999999999963 999999998887666654 33444433 2345567777763
No 53
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=22.42 E-value=1.4e+02 Score=29.51 Aligned_cols=38 Identities=8% Similarity=0.213 Sum_probs=28.1
Q ss_pred eccceeEeeecccc-----CCHHHHHHHHHHHHhcCCCEEEEe
Q 009601 275 EYENCKLLLVDKKI-----TNARDLINVLEDAIRGAYPILIIA 312 (531)
Q Consensus 275 ~~~~~kIll~d~~i-----~~~~~l~~~le~i~~~g~~lvI~~ 312 (531)
-+.+|+|+++|.|. .+-..+.+++.++++.|.-+|+..
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSS 190 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSS 190 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEec
Confidence 35799999999874 455678888888888886555533
No 54
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=20.07 E-value=99 Score=28.96 Aligned_cols=41 Identities=15% Similarity=0.310 Sum_probs=30.0
Q ss_pred ccceeEeeeccccCC-----HHHHHHHHHHHHhcCCCEEEEeccch
Q 009601 276 YENCKLLLVDKKITN-----ARDLINVLEDAIRGAYPILIIAEDIE 316 (531)
Q Consensus 276 ~~~~kIll~d~~i~~-----~~~l~~~le~i~~~g~~lvI~~~~I~ 316 (531)
+.+|+++++|.|... .+.+.++++.+.+.|..+|++.-+.+
T Consensus 143 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 143 AMRPDVLLLDEPTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 468999999998543 34677778777777888888775543
Done!