Query 009601
Match_columns 531
No_of_seqs 172 out of 1714
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 08:50:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009601.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009601hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 2E-110 5E-115 914.2 44.3 465 62-530 1-466 (547)
2 3rtk_A 60 kDa chaperonin 2; he 100.0 3E-111 1E-115 917.6 35.6 463 62-530 1-464 (546)
3 1we3_A CPN60(groel); chaperoni 100.0 1E-109 4E-114 908.2 47.7 465 62-530 1-466 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 1E-110 4E-115 916.0 37.2 465 62-530 2-467 (545)
5 3p9d_C T-complex protein 1 sub 100.0 1.5E-91 5E-96 770.1 32.3 432 63-530 11-525 (590)
6 3p9d_A T-complex protein 1 sub 100.0 1.6E-89 5.4E-94 752.8 33.5 407 63-530 16-475 (559)
7 3ko1_A Chaperonin; 9-fold symm 100.0 5.3E-88 1.8E-92 739.3 42.3 402 63-530 22-471 (553)
8 3iyg_B T-complex protein 1 sub 100.0 9.4E-88 3.2E-92 732.8 43.7 400 64-530 3-450 (513)
9 3iyg_H T-complex protein 1 sub 100.0 1.5E-87 5.3E-92 731.0 43.2 398 72-530 10-453 (515)
10 3ruv_A Chaperonin, CPN; double 100.0 1.2E-87 4E-92 736.2 40.8 401 64-530 12-457 (543)
11 1q3q_A Thermosome alpha subuni 100.0 1.3E-87 4.3E-92 736.6 40.2 402 63-530 15-464 (548)
12 1a6d_B Thermosome (beta subuni 100.0 2.6E-87 9E-92 733.8 41.6 402 63-530 13-462 (543)
13 1a6d_A Thermosome (alpha subun 100.0 2.1E-87 7.2E-92 734.4 39.2 401 63-530 14-461 (545)
14 3p9d_D T-complex protein 1 sub 100.0 3.2E-88 1.1E-92 738.4 31.8 406 63-530 11-467 (528)
15 3iyg_A T-complex protein 1 sub 100.0 8.6E-87 2.9E-91 727.7 42.2 405 65-530 4-459 (529)
16 3iyg_E T-complex protein 1 sub 100.0 3.3E-86 1.1E-90 721.3 43.3 401 64-530 3-453 (515)
17 3iyg_D T-complex protein 1 sub 100.0 3.4E-86 1.1E-90 721.3 42.0 398 67-530 7-457 (518)
18 3p9d_G T-complex protein 1 sub 100.0 3.2E-87 1.1E-91 733.2 29.1 403 64-530 17-466 (550)
19 3p9d_B T-complex protein 1 sub 100.0 2.7E-87 9.3E-92 731.7 28.4 401 63-530 9-457 (527)
20 3p9d_E T-complex protein 1 sub 100.0 3.3E-86 1.1E-90 726.8 36.6 407 64-530 38-496 (562)
21 3iyg_G T-complex protein 1 sub 100.0 2.7E-85 9.1E-90 713.8 42.3 395 72-530 8-452 (515)
22 3iyg_Q T-complex protein 1 sub 100.0 3E-85 1E-89 713.3 41.7 395 72-531 10-450 (512)
23 3iyg_Z T-complex protein 1 sub 100.0 4.3E-84 1.5E-88 704.2 39.5 394 72-530 9-456 (517)
24 3p9d_H T-complex protein 1 sub 100.0 1.8E-84 6.3E-89 713.8 34.4 395 72-530 25-476 (568)
25 3p9d_F T-complex protein 1 sub 100.0 6.6E-84 2.3E-88 707.3 28.7 400 65-530 11-471 (546)
26 3aq1_B Thermosome subunit; gro 100.0 3.2E-78 1.1E-82 655.9 33.6 366 101-530 1-415 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 5.5E-49 1.9E-53 366.3 15.6 193 248-440 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 1.4E-47 4.8E-52 357.5 17.2 189 251-439 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 2.7E-36 9.2E-41 268.8 14.6 144 253-396 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 2.6E-22 9E-27 189.1 13.0 146 244-448 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 8.5E-19 2.9E-23 162.1 12.8 126 251-399 1-153 (159)
32 3aon_B V-type sodium ATPase su 20.4 1.5E+02 0.0053 24.7 5.4 75 287-363 26-104 (115)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.6e-110 Score=914.19 Aligned_cols=465 Identities=56% Similarity=0.846 Sum_probs=454.0
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 62 ~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
++|++.|| .++|+.|++||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+|||||||++++|+
T Consensus 1 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~ 78 (547)
T 1kp8_A 1 AAKDVKFG--NDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVAS 78 (547)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHH
Confidence 37999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHh
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 220 (531)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++++++. +|.++|++|++++++|+
T Consensus 79 ~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~ 158 (547)
T 1kp8_A 79 KANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVG 158 (547)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHH
T ss_pred hhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877 89999999999999999
Q ss_pred HHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHH
Q 009601 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (531)
Q Consensus 221 ~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (531)
+++++|+.+++++|+|++++|++++|++++++||+|+++|.||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 159 ~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~ 238 (547)
T 1kp8_A 159 KLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEA 238 (547)
T ss_dssp HHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCce
Q 009601 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (531)
Q Consensus 301 i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (531)
+.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||++++.+|+|||++|||++++++.|++++++++++||+
T Consensus 239 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~ 318 (547)
T 1kp8_A 239 VAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQ 318 (547)
T ss_dssp HHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009601 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (531)
Q Consensus 381 ~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Da 460 (531)
|+.|+++++++++|+||++++.+++|++||+.+++.++++|+||+|+||+++|+|++|||+|||+|+.+++|+||+++||
T Consensus 319 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DA 398 (547)
T 1kp8_A 319 AKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDA 398 (547)
T ss_dssp EEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred eeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 461 l~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
||++|+++++|+|||||++|++++.+|++++. .++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 399 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~q-~~i~~~a~ALe~ip~~la~NaG~d~~~vv~ 466 (547)
T 1kp8_A 399 LHATRAAVEEGVVAGGGVALIRVASKLADLRG-QNADQN-VGIKVALRAMEAPLRQIVLNCGEEPSVVAN 466 (547)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSHHHH-HHHHHHHHHTTHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 99999999999999999999999999998875 555554 999999999999999999999999998875
No 2
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=3.4e-111 Score=917.58 Aligned_cols=463 Identities=56% Similarity=0.848 Sum_probs=384.2
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 62 ~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
|+|+|.|| .++|..|+.|++.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||++||||||++++|+
T Consensus 1 ~~k~~~~~--~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~ 78 (546)
T 3rtk_A 1 MAKTIAYD--EEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAK 78 (546)
T ss_dssp --------------------------------------------------------------CCCHHHHHHHHHHHHHHT
T ss_pred CCceeecc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHH
Confidence 48999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHh
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 220 (531)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++++++. +|.++|++|++ +++++
T Consensus 79 ~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~ 157 (546)
T 3rtk_A 79 KTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIG 157 (546)
T ss_dssp SCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877 89999999998 88999
Q ss_pred HHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHH
Q 009601 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (531)
Q Consensus 221 ~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (531)
+++++|+.+++++|+|+++.+++..+.+++++||+|+++|.||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 158 ~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~ 237 (546)
T 3rtk_A 158 DLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEK 237 (546)
T ss_dssp HHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHH
T ss_pred HHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHH
Confidence 99999999999999999987877665559999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCce
Q 009601 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (531)
Q Consensus 301 i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (531)
+.+.|+|||||+++|+++++++|+.|+++|+++|++||+|+||+.++.+|+|||++|||++++++.|++++++++++||+
T Consensus 238 I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~ 317 (546)
T 3rtk_A 238 VIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGK 317 (546)
T ss_dssp HHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009601 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (531)
Q Consensus 381 ~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Da 460 (531)
|+.|+++++++++|+||++++.++.|++||+.++++++++|+||+|+||+++|+|++|||+|||+|+.+++|+||+++||
T Consensus 318 a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DA 397 (546)
T 3rtk_A 318 ARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDA 397 (546)
T ss_dssp EEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHH
T ss_pred eEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 461 l~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
||++|+++++|+|||||++|++++.+|++++ .++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 398 l~a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 464 (546)
T 3rtk_A 398 VRNAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGDEA-TGANIVKVALEAPLKQIAFNSGLEPGVVAE 464 (546)
T ss_dssp HHHHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTTHH-HHHHHHHHHTTHHHHHHHTTTTCCHHHHHH
T ss_pred HHHHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 9999999999999999999999999999887 667766 899999999999999999999999998875
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.1e-109 Score=908.22 Aligned_cols=465 Identities=57% Similarity=0.861 Sum_probs=454.3
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 62 ~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
|+|+|.|| .++|..|++||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+|||||||++++|+
T Consensus 1 ~~k~~~~g--~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~ 78 (543)
T 1we3_A 1 MAKILVFD--EAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVAS 78 (543)
T ss_dssp -CEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHH
Confidence 37999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHh
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 220 (531)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++++++. +|.++|++|++ +++|+
T Consensus 79 ~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~ 157 (543)
T 1we3_A 79 KTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVG 157 (543)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999998 89999
Q ss_pred HHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHH
Q 009601 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (531)
Q Consensus 221 ~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (531)
+++++|+.+++++|.|++++|++++|++++++||+|+++|.||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 158 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~ 237 (543)
T 1we3_A 158 KLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQ 237 (543)
T ss_dssp HHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCce
Q 009601 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (531)
Q Consensus 301 i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (531)
+.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||++++.+|+|||++|||++++++.|++++++++++||+
T Consensus 238 i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~ 317 (543)
T 1we3_A 238 VAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR 317 (543)
T ss_dssp HHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEE
T ss_pred HHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009601 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (531)
Q Consensus 381 ~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Da 460 (531)
|+.|+++++++++|+||++++.+++|++||+.+++.++++|+||+|+||+++|+|++|||+|||+|+.+++|+||+++||
T Consensus 318 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DA 397 (543)
T 1we3_A 318 AERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDA 397 (543)
T ss_dssp EEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 461 l~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
||++|+++++|+|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 398 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 466 (543)
T 1we3_A 398 LNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEA-TGAKIVRRALEEPARQIAENAGYEGSVIVQ 466 (543)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHH-HHHHHHHHHTTHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 999999999999999999999999999999877766665 899999999999999999999999998875
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.1e-110 Score=916.00 Aligned_cols=465 Identities=54% Similarity=0.848 Sum_probs=411.9
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 62 ~~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
|+|+|.|| .++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+|||||||++++|+
T Consensus 2 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~ 79 (545)
T 1iok_A 2 AAKEVKFN--SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVAS 79 (545)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred Cchhhhcc--HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHH
Confidence 48999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-hhHHhhhhccCChhhHh
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 220 (531)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++++++. +|.++|++|++++++|+
T Consensus 80 ~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~ 159 (545)
T 1iok_A 80 RTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIG 159 (545)
T ss_dssp HGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHH
T ss_pred hhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999999999999
Q ss_pred HHHHHHHHhhccCCceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHH
Q 009601 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (531)
Q Consensus 221 ~li~~A~~~v~~~g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (531)
+++++|+.+++++|.|++++|++++|++++++||+|+++|.||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 160 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~ 239 (545)
T 1iok_A 160 QQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLES 239 (545)
T ss_dssp HHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-------
T ss_pred HHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCce
Q 009601 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (531)
Q Consensus 301 i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (531)
+.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||++++.+|+|||++|||++++++.|++++++++++||+
T Consensus 240 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~ 319 (545)
T 1iok_A 240 VIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR 319 (545)
T ss_dssp ----CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009601 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (531)
Q Consensus 381 ~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Da 460 (531)
|+.|++++++|++|+||++++.+++|++||+.+++.++++|+||+|+||+++|+|++|||+|||+|+.+++|+||+++||
T Consensus 320 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DA 399 (545)
T 1iok_A 320 AKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDA 399 (545)
T ss_dssp EEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCeeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 461 l~a~k~a~~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
||++|+++++|+|||||++|++++.+|++++. .++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 400 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 467 (545)
T 1iok_A 400 LNATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANSDQD-AGIAIIRRALEAPMRQIAENAGVDGAVVAG 467 (545)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSHHHH-HHHHHHHHHTTHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 99999999999999999999999999998875 555555 999999999999999999999999998875
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.5e-91 Score=770.07 Aligned_cols=432 Identities=19% Similarity=0.271 Sum_probs=368.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 009601 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (531)
Q Consensus 63 ~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (531)
..+..+| .++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Akll~e~a~~ 84 (590)
T 3p9d_C 11 SQERTTG--RQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AKSMLELSRT 84 (590)
T ss_dssp TCCBCTT--HHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HHTHHHHTTT
T ss_pred CcchhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HHHHHHHHHh
Confidence 3456677 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCccchHHHHHHHHHHHHHHH-HhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-hhHHhhhhccC----
Q 009601 143 TNDLAGDGTTTSVVLAQGLIAEGVKV-VAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG---- 214 (531)
Q Consensus 143 qd~~~GDGTTtvvvLa~~LL~~a~~l-i~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~---- 214 (531)
||+++||||||+||||++||+++.++ +++|+||+.|++||++|++.++++|++++++++. . .|.++|+||++
T Consensus 85 qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~ 164 (590)
T 3p9d_C 85 QDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYV 164 (590)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTT
T ss_pred hhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999 9999999999999999999999999999999874 3 89999998864
Q ss_pred --ChhhHhHHHHHHHHhhccCCc----------------eE--eecCCCccceeEEEeeeEEeecccCCccccCcccCee
Q 009601 215 --NNYEVGNMIAEAMSKVGRKGV----------------VT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAV 274 (531)
Q Consensus 215 --~~~~l~~li~~A~~~v~~~g~----------------I~--v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~ 274 (531)
++++|++|+++|+.++++++. |+ ..+|++++|+ ++++||+|++++.+| +|++
T Consensus 165 ~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~-------~m~~ 236 (590)
T 3p9d_C 165 IHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHP-------KMSR 236 (590)
T ss_dssp GGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCT-------TSCS
T ss_pred cccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCC-------CCcc
Confidence 478999999999999987642 22 2479999999 899999999998776 4888
Q ss_pred eccceeEeeeccc-------------cCCHHHHHHH-----------HHHHHhcCCCEEEEeccchHHHHHHHHHHhhcc
Q 009601 275 EYENCKLLLVDKK-------------ITNARDLINV-----------LEDAIRGAYPILIIAEDIEQEALATLVVNKLRG 330 (531)
Q Consensus 275 ~~~~~kIll~d~~-------------i~~~~~l~~~-----------le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g 330 (531)
+++||||+++|++ |++++++.++ ++++++.|++|||++++|+++++++|.++++
T Consensus 237 ~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I-- 314 (590)
T 3p9d_C 237 HIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGC-- 314 (590)
T ss_dssp CEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTC--
T ss_pred eeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccc--
Confidence 9999999999995 3556666554 4688899999999888999999999998743
Q ss_pred cceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCce-eeEEE---EeCceEEEEcCCCChhh----
Q 009601 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVV---LTKDTTTIVGDGSTQDA---- 402 (531)
Q Consensus 331 ~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~---i~~~~~~~~~g~~~~~~---- 402 (531)
+.|+++++.+|+|||++|||++++ +++++++++||+ |+.|+ +++++|++|+||++++.
T Consensus 315 ---------~av~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~ 380 (590)
T 3p9d_C 315 ---------SVLRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGW 380 (590)
T ss_dssp ---------CCCCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEECEEECC----------
T ss_pred ---------eeeccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccc
Confidence 457799999999999999999998 689999999999 99997 57899999999998888
Q ss_pred ----------------------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Q 009601 403 ----------------------VSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (531)
Q Consensus 403 ----------------------i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Da 460 (531)
+++|++||+.+++.++++|+++ +++|+|++|||+|||+|+.+++|+||+++||
T Consensus 381 ~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr~i~DA 455 (590)
T 3p9d_C 381 SHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDILNEIDRNLQDA 455 (590)
T ss_dssp ----------------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHH
T ss_pred cccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999976 4789999999999999999999999999999
Q ss_pred HHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 461 LNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 461 l~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
||++|+++++| +|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 456 l~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 525 (590)
T 3p9d_C 456 MAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQ-WPYQAVADAMECIPRTLIQNAGGDPIRLLS 525 (590)
T ss_dssp HHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTH-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHH
T ss_pred HHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 99999999996 9999999999999999999888888877 899999999999999999999999998875
No 6
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.6e-89 Score=752.76 Aligned_cols=407 Identities=23% Similarity=0.331 Sum_probs=376.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 009601 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (531)
Q Consensus 63 ~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (531)
+|+..|| .++|..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 16 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 89 (559)
T 3p9d_A 16 GGEKISG--DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQ 89 (559)
T ss_dssp SCEEEET--HHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHH
T ss_pred cccccch--HHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHH
Confidence 6999999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHh-cccccCc--h-hhHHhhhhccCC---
Q 009601 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVED--S-ELADVAAVSAGN--- 215 (531)
Q Consensus 143 qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~-~s~~v~~--~-~l~~va~ts~~~--- 215 (531)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++. . .|.++|+||+++
T Consensus 90 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~ 169 (559)
T 3p9d_A 90 QDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKII 169 (559)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGG
T ss_pred HHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999 9999875 3 899999999875
Q ss_pred ---hhhHhHHHHHHHHhhcc-----CCc-----eEe--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeecc--c
Q 009601 216 ---NYEVGNMIAEAMSKVGR-----KGV-----VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE--N 278 (531)
Q Consensus 216 ---~~~l~~li~~A~~~v~~-----~g~-----I~v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~--~ 278 (531)
+++|++|+++|+.++++ +|. |++ .+|++++|| ++++||+|+++|.||| |+.+++ |
T Consensus 170 ~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ie~~n 241 (559)
T 3p9d_A 170 GADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQA-------MPKRIAGGN 241 (559)
T ss_dssp GTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTT-------SCSEECSSS
T ss_pred cchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCC-------cceeeccCC
Confidence 79999999999999984 244 333 359999998 8999999999999997 456788 9
Q ss_pred eeEeeecccc-------------CCHHH-----------HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceE
Q 009601 279 CKLLLVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKI 334 (531)
Q Consensus 279 ~kIll~d~~i-------------~~~~~-----------l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i 334 (531)
|||+++|++| +++++ +.++++++.+.|+||||++++|+++++++|+.|+ |
T Consensus 242 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I 315 (559)
T 3p9d_A 242 VKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------I 315 (559)
T ss_dssp BCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------C
T ss_pred ceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------C
Confidence 9999999986 34444 6788999999999999999999999999999985 4
Q ss_pred EEeecCCcCccccchHHHHHHHhCCeEEecCCCccc-cCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHH
Q 009601 335 AALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLAL-DKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQI 410 (531)
Q Consensus 335 ~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l-~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l 410 (531)
+|| +++++.+|+|||++|||+++++..++.+ +++++++||+|+.|+ ++++++++|.||++
T Consensus 316 ~av-----~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------- 379 (559)
T 3p9d_A 316 MGV-----RRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK----------- 379 (559)
T ss_dssp EEE-----SSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS-----------
T ss_pred ceE-----ccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC-----------
Confidence 555 4778999999999999999998766665 889999999999998 57999999999876
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHH
Q 009601 411 RTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDA 489 (531)
Q Consensus 411 ~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~ 489 (531)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++
T Consensus 380 ------------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~ 435 (559)
T 3p9d_A 380 ------------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDN 435 (559)
T ss_dssp ------------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHH
T ss_pred ------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999 999999999999999999
Q ss_pred HhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 490 IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 490 ~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++.+.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 436 ~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 475 (559)
T 3p9d_A 436 FATTVGSREQ-LAIAEFAAALLIIPKTLAVNAAKDSSELVA 475 (559)
T ss_dssp HHTTSCTTHH-HHHHHHHHHHHHHHHHHHHTSSSCCHHHHH
T ss_pred HhcccChHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 9988888877 899999999999999999999999998874
No 7
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=5.3e-88 Score=739.31 Aligned_cols=402 Identities=21% Similarity=0.378 Sum_probs=368.8
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 009601 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (531)
Q Consensus 63 ~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (531)
+.+..|| .++|..|+.||+.|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 22 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 95 (553)
T 3ko1_A 22 GSSRTYG--KEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPA----AKLLVQIAKG 95 (553)
T ss_dssp ------C--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHH----HHHHHHHHHT
T ss_pred Ccccchh--HHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChh----HHHHHHHhhC
Confidence 3556677 899999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-hhHHhhhhccCC----
Q 009601 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (531)
Q Consensus 143 qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~---- 215 (531)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. .|.++|+||+++
T Consensus 96 qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~ 175 (553)
T 3ko1_A 96 QDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVA 175 (553)
T ss_dssp CSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCC
T ss_pred CcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999987 44 899999999875
Q ss_pred --hhhHhHHHHHHHHhhccC--Cc-------eEee--cCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009601 216 --NYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (531)
Q Consensus 216 --~~~l~~li~~A~~~v~~~--g~-------I~v~--~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIl 282 (531)
+++|++|+++|+.+++++ |. |+++ +|+++.|+ ++++||+|+++|.||| |+++++||||+
T Consensus 176 ~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIl 247 (553)
T 3ko1_A 176 GAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPG-------MPKRLENAKIA 247 (553)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTT-------SCSCCBSCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCC-------CccccccceEE
Confidence 789999999999999985 65 6663 78899998 9999999999999997 46679999999
Q ss_pred eeccc-------------cCCHHH-----------HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEee
Q 009601 283 LVDKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (531)
Q Consensus 283 l~d~~-------------i~~~~~-----------l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk 338 (531)
++|++ |+++++ +.++++++.+.|+||||++++|+++++++|.++ +|++|+
T Consensus 248 l~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~------gI~~v~ 321 (553)
T 3ko1_A 248 LIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKK------GVLAVR 321 (553)
T ss_dssp EECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHH------TCEEEC
T ss_pred EecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhc------chhhhh
Confidence 99994 577776 466789999999999999999999999999865 356665
Q ss_pred cCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHH
Q 009601 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (531)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~ri~~l~~~l~ 415 (531)
++++.+|+|||++|||++++ +++++++++||+|+.|++. +++++||.||+++
T Consensus 322 -----~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~--------------- 376 (553)
T 3ko1_A 322 -----RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP--------------- 376 (553)
T ss_dssp -----CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS---------------
T ss_pred -----hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCC---------------
Confidence 56799999999999999999 6999999999999999864 8899999999864
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccC
Q 009601 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (531)
Q Consensus 416 ~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (531)
..+||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++.+|++++.++
T Consensus 377 --------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 436 (553)
T 3ko1_A 377 --------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQV 436 (553)
T ss_dssp --------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHH
T ss_pred --------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhcccc
Confidence 589999999999999999999999999999999999 99999999999999999998888
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 437 ~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~ 471 (553)
T 3ko1_A 437 GGKEQ-LAVEAYANALESLVSILIENAGFDPIDLLM 471 (553)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CChhH-hHHHHHHHHHHhHHHHHHHhcCCCHHHHHH
Confidence 88877 899999999999999999999999998864
No 8
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=9.4e-88 Score=732.78 Aligned_cols=400 Identities=23% Similarity=0.314 Sum_probs=371.1
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCC--CCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKY--GAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 64 k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~--g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
.+-.|| .++|..|+.||+.|+++|+|||||+||||||++++ |+|+|||||+||||+|+++||. |||++++|+
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~ 76 (513)
T 3iyg_B 3 ADEERA--ETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSR 76 (513)
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHH
Confidence 445677 99999999999999999999999999999999999 9999999999999999999997 999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC-----ch-hhHHhhhhccC-
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAG- 214 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~-----~~-~l~~va~ts~~- 214 (531)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. .|.++|+|+++
T Consensus 77 ~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslss 156 (513)
T 3iyg_B 77 VQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSS 156 (513)
T ss_pred HhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999987 34 89999998774
Q ss_pred -----ChhhHhHHHHHHHHhhccC---CceEee--cCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009601 215 -----NNYEVGNMIAEAMSKVGRK---GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (531)
Q Consensus 215 -----~~~~l~~li~~A~~~v~~~---g~I~v~--~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~ 284 (531)
++++|++|+++|+.+++++ +.|+++ +|++++|| ++++||+|+++|.+| |+.+++||||+++
T Consensus 157 K~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~ 227 (513)
T 3iyg_B 157 KLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIA 227 (513)
T ss_pred cccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEE
Confidence 5689999999999999987 777763 69999999 999999999999886 6788999999999
Q ss_pred cc--------------ccCCHHHHHH-----------HHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeec
Q 009601 285 DK--------------KITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (531)
Q Consensus 285 d~--------------~i~~~~~l~~-----------~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~ 339 (531)
|+ .|++++++.+ +++++++.|+||||++++|+++++++|..+ +|+||+.
T Consensus 228 ~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~ 301 (513)
T 3iyg_B 228 NTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEH 301 (513)
T ss_pred cCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEec
Confidence 98 3567777654 689999999999999999999999999865 6899998
Q ss_pred CCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHh
Q 009601 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (531)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~ 416 (531)
|+ +.+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|.||++
T Consensus 302 ~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------- 354 (513)
T 3iyg_B 302 AD-----FVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL----------------- 354 (513)
T ss_pred CC-----HHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCC-----------------
Confidence 87 47899999999999999 68999999999999998 67899999999875
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCC
Q 009601 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (531)
Q Consensus 417 ~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~ 495 (531)
+++|||+|||+|+.+++|+||+++||||++|++++++ +|||||++|++++.+|++++.+.+
T Consensus 355 ------------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~ 416 (513)
T 3iyg_B 355 ------------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTP 416 (513)
T ss_pred ------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccC
Confidence 4699999999999999999999999999999999995 999999999999999999988888
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 496 ~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 417 g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~ 450 (513)
T 3iyg_B 417 GKEA-VAMESYAKALRMLPTIIADNAGYDSADLVA 450 (513)
T ss_pred cHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 8877 899999999999999999999999998875
No 9
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-87 Score=730.96 Aligned_cols=398 Identities=20% Similarity=0.305 Sum_probs=365.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.+++..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (515)
T 3iyg_H 10 IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDAEVGDGT 85 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhceeCcch
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--c----h-hhHHhhhhccC------Chhh
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--D----S-ELADVAAVSAG------NNYE 218 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~----~-~l~~va~ts~~------~~~~ 218 (531)
||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ + . .|.++|+||++ ++++
T Consensus 86 TtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~ 165 (515)
T 3iyg_H 86 TSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAF 165 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHH
Confidence 99999999999999999999999999999999999999999999999984 4 3 56899998874 5789
Q ss_pred HhHHHHHHHHhhccC---CceEe--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc------
Q 009601 219 VGNMIAEAMSKVGRK---GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (531)
Q Consensus 219 l~~li~~A~~~v~~~---g~I~v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~------ 287 (531)
|++|+++|+.+++.+ +.|++ .+|+++.|+ ++++||+|+++|.||||+++ +.+++||||+++|++
T Consensus 166 i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~~----p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 166 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEMQ----PKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred HHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCcccccC----CccccccEEEEEccccccccc
Confidence 999999999999876 67766 368899999 99999999999999999764 447999999999995
Q ss_pred -------cCCHHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccch
Q 009601 288 -------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (531)
Q Consensus 288 -------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~ 349 (531)
|++++++ .++++++.+.|+||||++++|++.++++|.++ | |+ .++++++.+
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~---g---I~-----~v~~~~k~~ 309 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR---D---MF-----CAGRVPEED 309 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc---C---Cc-----ccccccHHH
Confidence 6777776 56699999999999999999999888877543 3 34 346788999
Q ss_pred HHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHH
Q 009601 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (531)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l 426 (531)
|+|||++|||++++ +++++++++||+|+.|++. ++++++|+||+++
T Consensus 310 leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------------------------- 358 (515)
T 3iyg_H 310 LKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA-------------------------- 358 (515)
T ss_pred HHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC--------------------------
Confidence 99999999999999 5899999999999999864 7899999999863
Q ss_pred HHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHH
Q 009601 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (531)
Q Consensus 427 ~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (531)
..|||+|||+|+++++|+||+++||||++|++++++ +|||||++|++++.+|++++.+.++.+| +++++
T Consensus 359 ---------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 428 (515)
T 3iyg_H 359 ---------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQ-LLIGA 428 (515)
T ss_pred ---------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHH-HHHHH
Confidence 589999999999999999999999999999999996 9999999999999999999888888877 89999
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccc
Q 009601 506 VKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 506 ~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
|++||+.||++||+|||+|+.+++.
T Consensus 429 ~a~ALe~ip~~La~NaG~d~~~~v~ 453 (515)
T 3iyg_H 429 YAKALEIIPRQLCDNAGFDATNILN 453 (515)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 9999999999999999999998875
No 10
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.2e-87 Score=736.16 Aligned_cols=401 Identities=26% Similarity=0.374 Sum_probs=371.1
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhc
Q 009601 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (531)
Q Consensus 64 k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 143 (531)
.+..+| .++|..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++|
T Consensus 12 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 85 (543)
T 3ruv_A 12 MKRYMG--RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLIEVAKTQ 85 (543)
T ss_dssp EEEEET--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHHHHHHHH
T ss_pred cchhcc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHH
Confidence 455677 899999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-hhHHhhhhccCC-----
Q 009601 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN----- 215 (531)
Q Consensus 144 d~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~----- 215 (531)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. .|.++|+||+++
T Consensus 86 d~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~ 165 (543)
T 3ruv_A 86 EKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEK 165 (543)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGG
T ss_pred HhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccch
Confidence 9999999999999999999999999999999999999999999999999999999987 45 899999999864
Q ss_pred -hhhHhHHHHHHHHhhccC-Cc-----eEe--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeecc
Q 009601 216 -NYEVGNMIAEAMSKVGRK-GV-----VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK 286 (531)
Q Consensus 216 -~~~l~~li~~A~~~v~~~-g~-----I~v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~ 286 (531)
+++|++|+++|+.+++++ |. |++ .+|+++.|+ ++++||+|+++|.||| |+++++||||+++|+
T Consensus 166 ~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~~n~kIll~~~ 237 (543)
T 3ruv_A 166 AKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQ-------MPKKVTDAKIALLNC 237 (543)
T ss_dssp CCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTT-------SCSEEEEEEEEEESS
T ss_pred hHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCcc-------ccccccCcEEEEEcc
Confidence 789999999999999987 65 666 389999998 9999999999999997 466799999999999
Q ss_pred c-------------cCCHHH-----------HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCc
Q 009601 287 K-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGF 342 (531)
Q Consensus 287 ~-------------i~~~~~-----------l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~ 342 (531)
+ |+++++ +.++++++.+.|+||||++++|+++++++|.++ +|++|+
T Consensus 238 ~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~~v~---- 307 (543)
T 3ruv_A 238 AIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE------GIVAAR---- 307 (543)
T ss_dssp CBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT------TCEEEC----
T ss_pred cccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc------CcEEEe----
Confidence 5 566665 567789999999999999999999999999864 356665
Q ss_pred CccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhh
Q 009601 343 GERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQ 419 (531)
Q Consensus 343 ~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~ 419 (531)
++++.+|+|||++|||++++ +++++++++||+|+.|++. +++++||.||+++
T Consensus 308 -~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------------- 362 (543)
T 3ruv_A 308 -RVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHP------------------- 362 (543)
T ss_dssp -SCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC-------------------
T ss_pred -eCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCC-------------------
Confidence 56799999999999999999 6899999999999999864 8899999999874
Q ss_pred HHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChH
Q 009601 420 DYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDE 498 (531)
Q Consensus 420 ~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~e 498 (531)
..+||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++++.+
T Consensus 363 ----------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~e 426 (543)
T 3ruv_A 363 ----------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGRE 426 (543)
T ss_dssp ----------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTH
T ss_pred ----------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHH
Confidence 579999999999999999999999999999999999 999999999999999999998888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 499 EKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 499 q~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
| +++++|++||+.||++||+|||+|+.+++.
T Consensus 427 q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~ 457 (543)
T 3ruv_A 427 Q-LAVRAFADALEVIPRTLAENAGLDAIEILV 457 (543)
T ss_dssp H-HHHHHHHHHHTHHHHHHHHHTTCCHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 7 899999999999999999999999998864
No 11
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.3e-87 Score=736.60 Aligned_cols=402 Identities=24% Similarity=0.363 Sum_probs=375.6
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 009601 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (531)
Q Consensus 63 ~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (531)
++++.|| .++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 15 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 88 (548)
T 1q3q_A 15 GTQRYVG--RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AKMMVEVAKT 88 (548)
T ss_dssp TCEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHH
T ss_pred Ccceech--HHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 4778898 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-hhHHhhhhccC-----
Q 009601 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG----- 214 (531)
Q Consensus 143 qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~----- 214 (531)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. . +|.++|+|+++
T Consensus 89 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~ 168 (548)
T 1q3q_A 89 QDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAE 168 (548)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 4 89999998753
Q ss_pred -ChhhHhHHHHHHHHhhccC--C-------ceEee--cCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009601 215 -NNYEVGNMIAEAMSKVGRK--G-------VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (531)
Q Consensus 215 -~~~~l~~li~~A~~~v~~~--g-------~I~v~--~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIl 282 (531)
++++|++|+++|+.+++++ | .|+++ +|++++|| ++++||+|+++|.|||| +.+++||||+
T Consensus 169 ~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 240 (548)
T 1q3q_A 169 SHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM-------PKRVENAKIA 240 (548)
T ss_dssp GGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS-------CSEESSEEEE
T ss_pred cchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCCC-------cceecCCEEE
Confidence 5789999999999999876 4 67775 99999999 99999999999999985 4678999999
Q ss_pred eeccc-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEee
Q 009601 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (531)
Q Consensus 283 l~d~~-------------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk 338 (531)
++|++ |++++++ .++++++.+.|+||||++++|+++++++|..|+ |+||+
T Consensus 241 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~ 314 (548)
T 1q3q_A 241 LINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVR 314 (548)
T ss_dssp EECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEEC
T ss_pred EEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEc
Confidence 99998 7788875 788999999999999999999999999999874 57764
Q ss_pred cCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHH
Q 009601 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (531)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~ri~~l~~~l~ 415 (531)
++++++|+|||++|||++++ +++++++++||+|+.|++. ++++++|+||++
T Consensus 315 -----~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 368 (548)
T 1q3q_A 315 -----RVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKN---------------- 368 (548)
T ss_dssp -----SCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSS----------------
T ss_pred -----cCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC----------------
Confidence 77899999999999999998 6999999999999999864 899999999976
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccC
Q 009601 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (531)
Q Consensus 416 ~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (531)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+.
T Consensus 369 -------------------~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~ 429 (548)
T 1q3q_A 369 -------------------PKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQV 429 (548)
T ss_dssp -------------------CSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhc
Confidence 4699999999999999999999999999999999999 99999999999999999998777
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 430 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~ 464 (548)
T 1q3q_A 430 GGKEA-LAIENFADALKIIPKTLAENAGLDTVEMLV 464 (548)
T ss_dssp CHHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHH
T ss_pred CCcHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 77666 899999999999999999999999998875
No 12
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=2.6e-87 Score=733.80 Aligned_cols=402 Identities=22% Similarity=0.361 Sum_probs=370.0
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 009601 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (531)
Q Consensus 63 ~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (531)
+.+..|| .++|..|+.|+..|+++|+|||||+||||||++++|+++|||||+||||+|+++||+ |||++++|++
T Consensus 13 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 86 (543)
T 1a6d_B 13 GTKRESG--KDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----AKMMVEVSKT 86 (543)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----HHHHHHHHTC
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 3567888 899999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-hhHHhhhhcc------
Q 009601 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSA------ 213 (531)
Q Consensus 143 qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~------ 213 (531)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. . .|.++|+|++
T Consensus 87 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~ 166 (543)
T 1a6d_B 87 QDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSAS 166 (543)
T ss_dssp TTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 3 8999999875
Q ss_pred CChhhHhHHHHHHHHhhccC--Cc-------eEee--cCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009601 214 GNNYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (531)
Q Consensus 214 ~~~~~l~~li~~A~~~v~~~--g~-------I~v~--~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIl 282 (531)
+++++|++|+++|+.+++++ |. |+++ +|++++|+ ++++||+|+++|.|||| +.+++||||+
T Consensus 167 ~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 238 (543)
T 1a6d_B 167 VAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGM-------PDVVKDAKIA 238 (543)
T ss_dssp GGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCCC-------cceecCCeEE
Confidence 35789999999999999876 53 7665 99999999 99999999999999985 5678999999
Q ss_pred eeccc-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEee
Q 009601 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (531)
Q Consensus 283 l~d~~-------------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk 338 (531)
++|++ |++++++ .++++++.+.|+||||++++|+++++++|..++ |+||+
T Consensus 239 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~ 312 (543)
T 1a6d_B 239 LLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAVR 312 (543)
T ss_dssp EESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEEC
T ss_pred EEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEec
Confidence 99998 7777765 788999999999999999999999999999874 67775
Q ss_pred cCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHH
Q 009601 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (531)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~ 415 (531)
++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|+||++
T Consensus 313 -----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 366 (543)
T 1a6d_B 313 -----RVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKN---------------- 366 (543)
T ss_dssp -----SCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESS----------------
T ss_pred -----cCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC----------------
Confidence 77899999999999999998 699999999999999986 4889999999876
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccC
Q 009601 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (531)
Q Consensus 416 ~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (531)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+.
T Consensus 367 -------------------~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~ 427 (543)
T 1a6d_B 367 -------------------PKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKI 427 (543)
T ss_dssp -------------------SSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHT
T ss_pred -------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhc
Confidence 4699999999999999999999999999999999999 99999999999999999999888
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 428 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~ 462 (543)
T 1a6d_B 428 GGRQQ-LAIEKFADAIEEIPRALAENAGLDPIDILL 462 (543)
T ss_dssp CSSHH-HHHHHHHHHHTHHHHHHHHHHTCCHHHHHH
T ss_pred CChHH-HHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 88877 899999999999999999999999998875
No 13
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.1e-87 Score=734.44 Aligned_cols=401 Identities=22% Similarity=0.360 Sum_probs=372.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 009601 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (531)
Q Consensus 63 ~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (531)
+.++.|| .++|..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 14 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 87 (545)
T 1a6d_A 14 GTQREQG--KNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----AKMIVEVSKA 87 (545)
T ss_dssp ---CEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----HHHHHGGGGC
T ss_pred cchhhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----HHHHHHHHHh
Confidence 3567888 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC-ch-hhHHhhhhcc------C
Q 009601 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSA------G 214 (531)
Q Consensus 143 qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~-~~-~l~~va~ts~------~ 214 (531)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++ + +. .|.++|+|++ +
T Consensus 88 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~ 166 (545)
T 1a6d_A 88 QDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGL 166 (545)
T ss_dssp TTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCS
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999998 6 44 8999999875 3
Q ss_pred ChhhHhHHHHHHHHhhccC---------CceEee--cCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEee
Q 009601 215 NNYEVGNMIAEAMSKVGRK---------GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (531)
Q Consensus 215 ~~~~l~~li~~A~~~v~~~---------g~I~v~--~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll 283 (531)
++++|++|+++|+.+++++ +.|+++ +|++++|| ++++||+|+++|.|||| +.+++||||++
T Consensus 167 ~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll 238 (545)
T 1a6d_A 167 SNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM-------PDVVKNAKIAL 238 (545)
T ss_dssp THHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTTS-------CSEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCCC-------cceecCCEEEE
Confidence 5799999999999999875 367775 99999999 99999999999999985 46789999999
Q ss_pred eccc-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeec
Q 009601 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (531)
Q Consensus 284 ~d~~-------------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~ 339 (531)
+|++ |++++++ .++++++.+.|+||||++++|+++++++|+.|+ |+||+
T Consensus 239 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~- 311 (545)
T 1a6d_A 239 IDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR- 311 (545)
T ss_dssp ECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC-
T ss_pred EecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec-
Confidence 9998 6777765 788999999999999999999999999999984 57775
Q ss_pred CCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHh
Q 009601 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (531)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~ri~~l~~~l~~ 416 (531)
++++++|+|||++|||++++ +++++++++||+|+.|++. ++++++|+||++
T Consensus 312 ----~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------- 365 (545)
T 1a6d_A 312 ----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN----------------- 365 (545)
T ss_dssp ----SCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESC-----------------
T ss_pred ----cCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC-----------------
Confidence 77899999999999999998 6999999999999999864 789999999876
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCC
Q 009601 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (531)
Q Consensus 417 ~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~ 495 (531)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+.+
T Consensus 366 ------------------~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~ 427 (545)
T 1a6d_A 366 ------------------PKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVG 427 (545)
T ss_dssp ------------------SSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSC
T ss_pred ------------------CceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccC
Confidence 4699999999999999999999999999999999999 999999999999999999998787
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 496 ~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 428 g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~ 461 (545)
T 1a6d_A 428 GREQ-LAIEAFAKALEIIPRTLAENAGIDPINTLI 461 (545)
T ss_dssp HHHH-HHHHHHHHHHTHHHHHHHHHHTSCHHHHHH
T ss_pred ccHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 7766 899999999999999999999999998875
No 14
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=3.2e-88 Score=738.35 Aligned_cols=406 Identities=21% Similarity=0.302 Sum_probs=372.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 009601 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (531)
Q Consensus 63 ~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (531)
.|+..|| .++|..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~ 84 (528)
T 3p9d_D 11 FKNKEKP--QEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAA 84 (528)
T ss_dssp SCBCCCH--HHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHH
T ss_pred cchhcch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHH
Confidence 5788899 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-hhHHhhhhccCC----
Q 009601 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (531)
Q Consensus 143 qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~---- 215 (531)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. .|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~ 164 (528)
T 3p9d_D 85 QDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVS 164 (528)
T ss_dssp HHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCS
T ss_pred hhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999987 45 899999999864
Q ss_pred --hhhHhHHHHHHHHhhcc--CCceEe-------ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009601 216 --NYEVGNMIAEAMSKVGR--KGVVTL-------EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (531)
Q Consensus 216 --~~~l~~li~~A~~~v~~--~g~I~v-------~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~ 284 (531)
+++|++|+++|+.++++ +|.|.+ .+|++++|| ++++||+|+++|.|||| |+++++||||+++
T Consensus 165 ~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~ 237 (528)
T 3p9d_D 165 QYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLI 237 (528)
T ss_dssp TTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEE
T ss_pred hhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEE
Confidence 79999999999999987 454333 359999998 99999999999999985 7888999999999
Q ss_pred ccccC-------------CHHH-----------HHHHHHHHHhcCCCEEEEeccc-----hHHHHHHHHHHhhcccceEE
Q 009601 285 DKKIT-------------NARD-----------LINVLEDAIRGAYPILIIAEDI-----EQEALATLVVNKLRGALKIA 335 (531)
Q Consensus 285 d~~i~-------------~~~~-----------l~~~le~i~~~g~~lvI~~~~I-----~~~al~~L~~n~~~g~~~i~ 335 (531)
|++|+ ++++ +.++++++.+.|+||||++++| +++++++|..+ +|+
T Consensus 238 ~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~------~I~ 311 (528)
T 3p9d_D 238 QFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKL------NIM 311 (528)
T ss_dssp CCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTT------SCC
T ss_pred eccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHc------CcE
Confidence 99865 4443 6788999999999999999999 99999999876 467
Q ss_pred EeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHH
Q 009601 336 ALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRT 412 (531)
Q Consensus 336 aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~ 412 (531)
||+ ++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|.+|....
T Consensus 312 av~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~----------- 370 (528)
T 3p9d_D 312 VVK-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN----------- 370 (528)
T ss_dssp EEE-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-----------
T ss_pred EEE-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-----------
Confidence 777 55689999999999999999 578999999999999984 577889999886210
Q ss_pred HHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHh
Q 009601 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (531)
Q Consensus 413 ~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~ 491 (531)
.+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++
T Consensus 371 ---------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~ 429 (528)
T 3p9d_D 371 ---------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEA 429 (528)
T ss_dssp ---------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCC
T ss_pred ---------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHh
Confidence 15799999999999999999999999999999999999 99999999999999999998
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 492 ~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
.+.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 430 ~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 467 (528)
T 3p9d_D 430 RSMEGVQA-FIWQEFASALEVIPTTLAENAGLNSIKVVT 467 (528)
T ss_dssp TTSCHHHH-TTHHHHHHHHTHHHHHHHHTTSSCHHHHHH
T ss_pred hccChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 77777776 899999999999999999999999998864
No 15
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.6e-87 Score=727.67 Aligned_cols=405 Identities=21% Similarity=0.301 Sum_probs=369.6
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcc
Q 009601 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (531)
Q Consensus 65 ~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd 144 (531)
+-.|| .++|..|+.|+..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+ |+|++++|++||
T Consensus 4 ~~~~g--~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd 77 (529)
T 3iyg_A 4 DRSTG--EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQD 77 (529)
T ss_pred chhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhh
Confidence 44577 899999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHh-cccccC--ch-hhHHhhhhccC------
Q 009601 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVE--DS-ELADVAAVSAG------ 214 (531)
Q Consensus 145 ~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~-~s~~v~--~~-~l~~va~ts~~------ 214 (531)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++ +. .|.++|+||++
T Consensus 78 ~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~ 157 (529)
T 3iyg_A 78 KEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGI 157 (529)
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999 999987 44 89999999874
Q ss_pred ChhhHhHHHHHHHHhhc---cCC-----c--eEe--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEe
Q 009601 215 NNYEVGNMIAEAMSKVG---RKG-----V--VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (531)
Q Consensus 215 ~~~~l~~li~~A~~~v~---~~g-----~--I~v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIl 282 (531)
++++|++|+++|+.+++ ++| . |++ .+|++++|| ++++||+|+++|.||+ |+..++||||+
T Consensus 158 ~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIl 229 (529)
T 3iyg_A 158 NGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQG-------MPKRIVNAKIA 229 (529)
T ss_pred cHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCccccc-------CCcccCCceEE
Confidence 47899999999999997 344 2 444 589999999 9999999999999997 45578999999
Q ss_pred eecccc-------------CCHHH-----------HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEee
Q 009601 283 LVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (531)
Q Consensus 283 l~d~~i-------------~~~~~-----------l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk 338 (531)
++|+++ +++++ +.++++++.+.|+||||++++|+++++++|..|+ |+||+
T Consensus 230 ll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~ 303 (529)
T 3iyg_A 230 CLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVR 303 (529)
T ss_pred EecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Cceec
Confidence 999974 34433 5677899999999999999999999999999983 56666
Q ss_pred cCCcCccccchHHHHHHHhCCeEEecCCCcc-ccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHH
Q 009601 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLA-LDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLI 414 (531)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~-l~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l 414 (531)
++++++|+|||++|||+++++..+++ .+++++++||+|+.|+ ++++++++|.||+++
T Consensus 304 -----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-------------- 364 (529)
T 3iyg_A 304 -----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR-------------- 364 (529)
T ss_pred -----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC--------------
Confidence 67799999999999999999755544 3456789999999998 789999999999863
Q ss_pred HhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhcc
Q 009601 415 ENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKET 493 (531)
Q Consensus 415 ~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~ 493 (531)
++|||+|||+|+.+++|.||+++||||++|+++++| +|||||++||++|.+|++++.+
T Consensus 365 ---------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~ 423 (529)
T 3iyg_A 365 ---------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATS 423 (529)
T ss_pred ---------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhh
Confidence 589999999999999999999999999999999999 9999999999999999999988
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 494 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 494 ~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 424 ~~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~ 459 (529)
T 3iyg_A 424 MGSREQ-LAIAEFARSLLVIPNTLAVNAAQDSTDLVA 459 (529)
T ss_pred cCChHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 888888 899999999999999999999999998875
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.3e-86 Score=721.28 Aligned_cols=401 Identities=22% Similarity=0.334 Sum_probs=365.5
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhc
Q 009601 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (531)
Q Consensus 64 k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 143 (531)
++-.|| .++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~q 76 (515)
T 3iyg_E 3 KSRLMG--LEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQ 76 (515)
T ss_pred chhhch--HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHh
Confidence 345678 999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc----h-hhHHhhhhccCC---
Q 009601 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN--- 215 (531)
Q Consensus 144 d~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~----~-~l~~va~ts~~~--- 215 (531)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. . +|.++|+||+++
T Consensus 77 d~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i 156 (515)
T 3iyg_E 77 DDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVV 156 (515)
T ss_pred hhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccch
Confidence 99999999999999999999999999999999999999999999999999999988753 3 899999999875
Q ss_pred ---hhhHhHHHHHHHHhhccC-------CceEe--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEee
Q 009601 216 ---NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (531)
Q Consensus 216 ---~~~l~~li~~A~~~v~~~-------g~I~v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll 283 (531)
.+.|++++++|+..+.+. +.|++ .+|++++|+ ++++||+|+++|.||||+ ..+++|+|++
T Consensus 157 ~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m~-------~~~~~~kIal 228 (515)
T 3iyg_E 157 NSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQMP-------KQVEDAKIAI 228 (515)
T ss_pred hHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEeccccccccc-------ccCCCceEEE
Confidence 578999999999998652 23444 589999999 999999999999999864 4467888888
Q ss_pred eccc-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeec
Q 009601 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (531)
Q Consensus 284 ~d~~-------------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~ 339 (531)
++++ |++++++ .++++++.+.|+||||++++|+++++++|+.|+ +.+|+.
T Consensus 229 l~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~------I~~v~~ 302 (515)
T 3iyg_E 229 LTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQND------LPAVRW 302 (515)
T ss_pred EcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCC------CEEEec
Confidence 8775 4566665 678999999999999999999999999999985 456664
Q ss_pred CCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE-----eCceEEEEcCCCChhhHHHHHHHHHHHH
Q 009601 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIRTLI 414 (531)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i-----~~~~~~~~~g~~~~~~i~~ri~~l~~~l 414 (531)
+++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|+||+++
T Consensus 303 -----v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~-------------- 358 (515)
T 3iyg_E 303 -----VGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS-------------- 358 (515)
T ss_pred -----cCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC--------------
Confidence 4589999999999999998 689999999999999986 34899999999863
Q ss_pred HhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhcc
Q 009601 415 ENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKET 493 (531)
Q Consensus 415 ~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~ 493 (531)
..|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+
T Consensus 359 ---------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~ 417 (515)
T 3iyg_E 359 ---------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADK 417 (515)
T ss_pred ---------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhcc
Confidence 578999999999999999999999999999999999 9999999999999999999988
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 494 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 494 ~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 418 ~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~ 453 (515)
T 3iyg_E 418 CPTLEQ-YAMRAFADALEVIPMALAENSGMNPIQTMT 453 (515)
T ss_pred CCcHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 888877 899999999999999999999999998875
No 17
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.4e-86 Score=721.34 Aligned_cols=398 Identities=22% Similarity=0.307 Sum_probs=365.0
Q ss_pred ccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccc
Q 009601 67 HFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDL 146 (531)
Q Consensus 67 ~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~ 146 (531)
.+| .++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||++
T Consensus 7 ~~g--~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~~ 80 (518)
T 3iyg_D 7 DKP--AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQDIE 80 (518)
T ss_pred hhh--HHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhhhh
Confidence 345 789999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-hhHHhhhhccCCh------h
Q 009601 147 AGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGNN------Y 217 (531)
Q Consensus 147 ~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~~------~ 217 (531)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. .|.++|+||++++ +
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~ 160 (518)
T 3iyg_D 81 AGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSS 160 (518)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHH
Confidence 9999999999999999999999999999999999999999999999999999987 44 8999999999864 8
Q ss_pred hHhHHHHHHHHhhcc---CCc-----eEee--cCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc
Q 009601 218 EVGNMIAEAMSKVGR---KGV-----VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK 287 (531)
Q Consensus 218 ~l~~li~~A~~~v~~---~g~-----I~v~--~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~ 287 (531)
+|++|+++|+.++++ +|. |+++ +|++..|+ ++++||+|+++|.| . ||..++||+|++++++
T Consensus 161 ~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~~ 231 (518)
T 3iyg_D 161 LLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQFC 231 (518)
T ss_pred HHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEEee
Confidence 999999999999985 554 5553 78999998 99999999999987 2 4556788999998886
Q ss_pred c-------------CCHH-----------HHHHHHHHHHhcCCCEEEE-----eccchHHHHHHHHHHhhcccceEEEee
Q 009601 288 I-------------TNAR-----------DLINVLEDAIRGAYPILII-----AEDIEQEALATLVVNKLRGALKIAALK 338 (531)
Q Consensus 288 i-------------~~~~-----------~l~~~le~i~~~g~~lvI~-----~~~I~~~al~~L~~n~~~g~~~i~aVk 338 (531)
+ ++++ ++.++++++.+.|+||||+ +++|+++++++|..+ +|+||+
T Consensus 232 Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av~ 305 (518)
T 3iyg_D 232 LSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVVK 305 (518)
T ss_pred ccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEEe
Confidence 4 4454 4678899999999999999 899999999999986 579999
Q ss_pred cCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eC-ceEEEEcCCCChhhHHHHHHHHHHHH
Q 009601 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TK-DTTTIVGDGSTQDAVSKRVAQIRTLI 414 (531)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~-~~~~~~~g~~~~~~i~~ri~~l~~~l 414 (531)
.|+ +.+|+|||++|||++++ +++++++++||+|+.|++ ++ +++++|+||++
T Consensus 306 ~~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~--------------- 360 (518)
T 3iyg_D 306 DIE-----REDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS--------------- 360 (518)
T ss_pred cCC-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC---------------
Confidence 887 57899999999999999 589999999999999986 35 68899999864
Q ss_pred HhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhcc
Q 009601 415 ENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKET 493 (531)
Q Consensus 415 ~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~ 493 (531)
++++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+
T Consensus 361 -------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~ 421 (518)
T 3iyg_D 361 -------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRT 421 (518)
T ss_pred -------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhc
Confidence 25799999999999999999999999999999999999 9999999999999999999888
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 494 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 494 ~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
.++.+| +++++|++||+.||++||+|||+||.+++.
T Consensus 422 ~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~ 457 (518)
T 3iyg_D 422 LSGMES-YCIRAFADAMEVIPSTLAENAGLNPISTVT 457 (518)
T ss_pred CChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 888877 899999999999999999999999998875
No 18
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=3.2e-87 Score=733.18 Aligned_cols=403 Identities=19% Similarity=0.289 Sum_probs=367.9
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhc
Q 009601 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (531)
Q Consensus 64 k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 143 (531)
.+-.+| .+++..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 17 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~q 90 (550)
T 3p9d_G 17 TDASQG--KGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTLVDISRAQ 90 (550)
T ss_dssp CCEEES--HHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHHHHHHHHH
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHh
Confidence 455677 899999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc-----h-hhHHhhhhccC---
Q 009601 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG--- 214 (531)
Q Consensus 144 d~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~--- 214 (531)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. . .|.++|+||++
T Consensus 91 d~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~ 170 (550)
T 3p9d_G 91 DAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKL 170 (550)
T ss_dssp HTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTT
T ss_pred hhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999998853 4 79999999864
Q ss_pred ---ChhhHhHHHHHHHHhhcc-C------CceEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009601 215 ---NNYEVGNMIAEAMSKVGR-K------GVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (531)
Q Consensus 215 ---~~~~l~~li~~A~~~v~~-~------g~I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~ 284 (531)
++++|++|++||+.++++ + +++++ +|++++|| ++++||+|+++|.||||.+ |+..++||+|+++
T Consensus 171 ~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll~ 244 (550)
T 3p9d_G 171 IHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILSL 244 (550)
T ss_dssp TGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEEE
T ss_pred ccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEEeeEEEecccccccccc----CcccccCceEEEe
Confidence 478999999999999984 3 45555 69999999 9999999999999999975 5556999999999
Q ss_pred ccc-------------cCCHHHHHH-----------HHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecC
Q 009601 285 DKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (531)
Q Consensus 285 d~~-------------i~~~~~l~~-----------~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~ 340 (531)
|++ |++++++.+ +++++++.|++|||++++|++.++++|.++ +|+++
T Consensus 245 ~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~------gI~~v--- 315 (550)
T 3p9d_G 245 NVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADR------NIFCA--- 315 (550)
T ss_dssp CSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGG------TCEEE---
T ss_pred ccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHc------CCccc---
Confidence 998 456655544 688899999999999999999998877643 34544
Q ss_pred CcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 009601 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (531)
Q Consensus 341 ~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~ 417 (531)
+++++.+|++||++|||++++ +++++++++||+|+.|++ +++++++|.||++
T Consensus 316 --~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~------------------ 370 (550)
T 3p9d_G 316 --GRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQ------------------ 370 (550)
T ss_dssp --ECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTT------------------
T ss_pred --cCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCC------------------
Confidence 577899999999999999998 699999999999999986 6889999999976
Q ss_pred hhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCC
Q 009601 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDN 496 (531)
Q Consensus 418 ~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~ 496 (531)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++++
T Consensus 371 -----------------~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g 433 (550)
T 3p9d_G 371 -----------------AKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAG 433 (550)
T ss_dssp -----------------CCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCS
T ss_pred -----------------CceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCCh
Confidence 3689999999999999999999999999999999999 9999999999999999999888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 497 DEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 497 ~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 434 ~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 466 (550)
T 3p9d_G 434 KQQ-MIINAFAKALEVIPRQLCENAGFDAIEILN 466 (550)
T ss_dssp TTH-HHHHHHHHHHTHHHHHHHHTSCSCHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 887 899999999999999999999999998875
No 19
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=2.7e-87 Score=731.73 Aligned_cols=401 Identities=22% Similarity=0.333 Sum_probs=369.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeec-CCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 009601 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLES-KYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (531)
Q Consensus 63 ~k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~-~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (531)
.++..|| .++|..|+.||+.|+++|+|||||+||||||++ ++|+|+|||||+||||+|+++||. |||++++|+
T Consensus 9 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~ 82 (527)
T 3p9d_B 9 QVTEERA--ENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISK 82 (527)
T ss_dssp CEEEEES--HHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHH
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHH
Confidence 5788999 999999999999999999999999999999999 899999999999999999999997 999999999
Q ss_pred hcccccCCccchHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHhcccccCc-----h-hhHHhhhhccC
Q 009601 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAA-GANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG 214 (531)
Q Consensus 142 ~qd~~~GDGTTtvvvLa~~LL~~a~~li~~-Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~ 214 (531)
+||+++||||||+||||++||+++.+++++ |+||+.|++||++|++.++++|++++++++. . +|.++|+||++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccc
Confidence 999999999999999999999999999999 9999999999999999999999999999875 4 89999999987
Q ss_pred C------hhhHhHHHHHHHHhhccCC---ceEee--cCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEee
Q 009601 215 N------NYEVGNMIAEAMSKVGRKG---VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (531)
Q Consensus 215 ~------~~~l~~li~~A~~~v~~~g---~I~v~--~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll 283 (531)
+ +++|++|+++|+.++++++ .|+++ .|+++.|+ ++++||+|+++|.||| +..++||+|++
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~~~~n~kIll 233 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PKRIENAKILI 233 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CSCCSSCEEEE
T ss_pred cCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC--------CeeeecceEEE
Confidence 5 6899999999999999987 67764 69999999 9999999999999996 23468999999
Q ss_pred ecccc--------------CCHHHH-----------HHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEee
Q 009601 284 VDKKI--------------TNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (531)
Q Consensus 284 ~d~~i--------------~~~~~l-----------~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk 338 (531)
+++++ ++++++ ++.++++.+.|+||||++++|+++++++|..+ +|++|+
T Consensus 234 l~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~------~i~av~ 307 (527)
T 3p9d_B 234 ANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDL------GINSIE 307 (527)
T ss_dssp ECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHT------CBCCCC
T ss_pred eccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHC------CCEEEe
Confidence 88863 445554 57889999999999999999999999999987 468888
Q ss_pred cCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHH
Q 009601 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (531)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~ 415 (531)
.|+ +.+|++||++|||++++ +++++++++||+|+.|+ ++++++++|.||++
T Consensus 308 ~~~-----~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 361 (527)
T 3p9d_B 308 HAD-----FEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA---------------- 361 (527)
T ss_dssp CCH-----HHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC----------------
T ss_pred cCC-----HHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCC----------------
Confidence 665 67899999999999998 58899999999999998 57899999999875
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccC
Q 009601 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (531)
Q Consensus 416 ~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (531)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+.
T Consensus 362 -------------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 422 (527)
T 3p9d_B 362 -------------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNI 422 (527)
T ss_dssp -------------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhcc
Confidence 4799999999999999999999999999999999999 99999999999999999998877
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 423 ~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 457 (527)
T 3p9d_B 423 DGKKS-LAVEAFARALRQLPTILADNAGFDSSELVS 457 (527)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHHHHHHHTSCSHHHHH
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHhccCCCHHHHHH
Confidence 78877 899999999999999999999999998875
No 20
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=3.3e-86 Score=726.83 Aligned_cols=407 Identities=23% Similarity=0.348 Sum_probs=367.7
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhc
Q 009601 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (531)
Q Consensus 64 k~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 143 (531)
++..|| .++|..|+.||+.|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++|
T Consensus 38 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 111 (562)
T 3p9d_E 38 KKRQHG--LEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI----AKLLVQLSKSQ 111 (562)
T ss_dssp CSCSHH--HHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHHH
T ss_pred ceecch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH----HHHHHHHHHHH
Confidence 678888 999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc-------hhhHHhhhhccCC-
Q 009601 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-------SELADVAAVSAGN- 215 (531)
Q Consensus 144 d~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~-------~~l~~va~ts~~~- 215 (531)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. +.|.++|+||+++
T Consensus 112 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK 191 (562)
T 3p9d_E 112 DDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSK 191 (562)
T ss_dssp HHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSS
T ss_pred HhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999988864 2699999998864
Q ss_pred -----hhhHhHHHHHHHHhhccC-------CceEe--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeE
Q 009601 216 -----NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKL 281 (531)
Q Consensus 216 -----~~~l~~li~~A~~~v~~~-------g~I~v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kI 281 (531)
.++|+++++||+..+.+. +.|++ .+|++++|| ++++||+|+++|.||||+++.+ .+..+++|+|
T Consensus 192 ~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~kI 269 (562)
T 3p9d_E 192 IVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL-PKEGSDGVKL 269 (562)
T ss_dssp TTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC------TTCSSCEE
T ss_pred hhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-cccccccceE
Confidence 578999999999998752 23443 589999999 9999999999999999876432 1223479999
Q ss_pred eeecccc-------------CCHHH-----------HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEe
Q 009601 282 LLVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAAL 337 (531)
Q Consensus 282 ll~d~~i-------------~~~~~-----------l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aV 337 (531)
+++++++ +++++ +.++++++++.|+||||++++|+++++++|..|++ .+|
T Consensus 270 all~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I------~~v 343 (562)
T 3p9d_E 270 AILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDL------PAV 343 (562)
T ss_dssp CEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTC------CCE
T ss_pred EEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCC------EEE
Confidence 9988863 45555 57889999999999999999999999999998854 455
Q ss_pred ecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE-----eCceEEEEcCCCChhhHHHHHHHHHH
Q 009601 338 KAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIRT 412 (531)
Q Consensus 338 k~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i-----~~~~~~~~~g~~~~~~i~~ri~~l~~ 412 (531)
+ ++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|+||+++
T Consensus 344 ~-----~v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~------------ 401 (562)
T 3p9d_E 344 R-----WVGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET------------ 401 (562)
T ss_dssp E-----CCCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC------------
T ss_pred e-----ccCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC------------
Confidence 5 44589999999999999999 689999999999999997 35899999999863
Q ss_pred HHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHh
Q 009601 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (531)
Q Consensus 413 ~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~ 491 (531)
..|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++
T Consensus 402 -----------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~ 458 (562)
T 3p9d_E 402 -----------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEA 458 (562)
T ss_dssp -----------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHH
T ss_pred -----------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999999 99999999999999999998
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 492 ~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
.+.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 459 ~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 496 (562)
T 3p9d_E 459 DKQRGIDQ-YAFRGFAQALDTIPMTLAENSGLDPIGTLS 496 (562)
T ss_dssp HTTCTTHH-HHHHHHHHHHTHHHHHHHHTTTSCHHHHHH
T ss_pred ccCccHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 88888877 899999999999999999999999998874
No 21
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.7e-85 Score=713.81 Aligned_cols=395 Identities=20% Similarity=0.309 Sum_probs=363.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.+++..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 83 (515)
T 3iyg_G 8 RKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEEVGDGT 83 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-hhHHhhhhccCC------hhhHhHH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGN------NYEVGNM 222 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~~------~~~l~~l 222 (531)
||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. . .|.++|+||+++ .++++++
T Consensus 84 TtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i 163 (515)
T 3iyg_G 84 TSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNI 163 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998874 3 899999999863 4677899
Q ss_pred HHHHHHhhccC--C--------ceEe--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeecc----
Q 009601 223 IAEAMSKVGRK--G--------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK---- 286 (531)
Q Consensus 223 i~~A~~~v~~~--g--------~I~v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~---- 286 (531)
+++|+..+.++ + .|++ .+|++++|| ++++||+|+++|.||. |+++++||||+++|+
T Consensus 164 ~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 164 ALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred HHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccc
Confidence 99999998732 2 1333 589999999 9999999999999984 778899999999999
Q ss_pred ---------ccCCHHHHHHHHH-----------HHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccc
Q 009601 287 ---------KITNARDLINVLE-----------DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERK 346 (531)
Q Consensus 287 ---------~i~~~~~l~~~le-----------~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~ 346 (531)
.|++++++.++++ ++.+.|++|||++++|++.++++|..+ +|+|| ++++
T Consensus 236 ~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av-----~~~~ 304 (515)
T 3iyg_G 236 KKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA------NITAI-----RRVR 304 (515)
T ss_pred cccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC------Cceee-----ccCC
Confidence 4678888877766 899999999999999999999999864 45654 6888
Q ss_pred cchHHHHHHHhCCeEEecCCCccccCCCCCCCce-eeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHH
Q 009601 347 SQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYE 422 (531)
Q Consensus 347 ~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e 422 (531)
+++|+|||++|||++++ +++++++++||+ |+.|++ ++++++||+||+++
T Consensus 305 k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~---------------------- 357 (515)
T 3iyg_G 305 KTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP---------------------- 357 (515)
T ss_pred HHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCC----------------------
Confidence 99999999999999999 589999999999 999985 46789999999874
Q ss_pred HHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHH
Q 009601 423 REKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKV 501 (531)
Q Consensus 423 ~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~ 501 (531)
..|||+|||+|+++++|+||+++||||++|++++++ +|||||++|++++.+|++++.+.++.+| +
T Consensus 358 -------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq-~ 423 (515)
T 3iyg_G 358 -------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQ-W 423 (515)
T ss_pred -------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHH-H
Confidence 589999999999999999999999999999999876 9999999999999999999988888887 8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 502 GADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 502 ~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++++|++||+.||++||+|||+|+.+++.
T Consensus 424 ~i~~~a~Ale~ip~~La~NaG~d~~~~v~ 452 (515)
T 3iyg_G 424 PYRAVAQALEVIPRTLIQNCGASTIRLLT 452 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 99999999999999999999999998875
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3e-85 Score=713.29 Aligned_cols=395 Identities=20% Similarity=0.286 Sum_probs=360.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
++++..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (512)
T 3iyg_Q 10 EEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQEQEVGDGT 85 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 689999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhc----ccccCch-hhHHhhhhccCC-----hhhHhH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQM----SKEVEDS-ELADVAAVSAGN-----NYEVGN 221 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~----s~~v~~~-~l~~va~ts~~~-----~~~l~~ 221 (531)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++ ++++++. +|.++|+||+++ +++|++
T Consensus 86 TtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 165 (512)
T 3iyg_Q 86 NFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAK 165 (512)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHH
Confidence 999999999999999999999999999999999999999999998 5566666 899999999876 789999
Q ss_pred HHHHHHHhhccC-CceEe-------ecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc------
Q 009601 222 MIAEAMSKVGRK-GVVTL-------EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (531)
Q Consensus 222 li~~A~~~v~~~-g~I~v-------~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~------ 287 (531)
|+++|+.+++++ +.|.+ ..|+++.|+ ++++||+|+++|.+ |+..++||+|++++++
T Consensus 166 livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~~le~~~~ 235 (512)
T 3iyg_Q 166 LIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYSCPFDGMIT 235 (512)
T ss_pred HHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEecccccccc
Confidence 999999999986 44432 469999888 99999999999865 3456788999998876
Q ss_pred -------cCCHHHHHHH-------HH----HHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccch
Q 009601 288 -------ITNARDLINV-------LE----DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (531)
Q Consensus 288 -------i~~~~~l~~~-------le----~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~ 349 (531)
|++++++.++ ++ ++.+.|+||||++++|++.++++|..+ +|+||+.|+ +.+
T Consensus 236 e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~-----~~d 304 (512)
T 3iyg_Q 236 ETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNS-----KWD 304 (512)
T ss_pred cccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCC-----HHH
Confidence 4667777665 44 889999999999999999998887643 789999887 567
Q ss_pred HHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHH
Q 009601 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (531)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l 426 (531)
|+|||++|||++++ +++++++++||+|++|++ +++++++|++|+.
T Consensus 305 le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~--------------------------- 352 (512)
T 3iyg_Q 305 LRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE--------------------------- 352 (512)
T ss_pred HHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC---------------------------
Confidence 99999999999999 699999999999999986 4678999998853
Q ss_pred HHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHH
Q 009601 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (531)
Q Consensus 427 ~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (531)
++++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+.++.+| +++++
T Consensus 353 -------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 424 (512)
T 3iyg_Q 353 -------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQ-YAIKK 424 (512)
T ss_pred -------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHH-HHHHH
Confidence 25799999999999999999999999999999999999 9999999999999999999888888877 89999
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccC
Q 009601 506 VKRALCYPLKLIAKNAGVNGSVVSEK 531 (531)
Q Consensus 506 ~a~AL~~ip~~L~~NaG~d~~~v~~k 531 (531)
|++||+.||++||+|||+||.+++.|
T Consensus 425 ~a~ALe~ip~~La~NaG~d~~~~v~~ 450 (512)
T 3iyg_Q 425 FAEAFEAIPRALAENSGVKANEVISK 450 (512)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 99999999999999999999988753
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.3e-84 Score=704.16 Aligned_cols=394 Identities=23% Similarity=0.374 Sum_probs=355.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
.+++..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 9 ~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~e~GDGT 84 (517)
T 3iyg_Z 9 QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDDITGDGT 84 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHHHhCCCc
Confidence 889999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC-ch-hhHHhhhhccCC------hhhHhHHH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSAGN------NYEVGNMI 223 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~-~~-~l~~va~ts~~~------~~~l~~li 223 (531)
||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. .|.++|+||+++ .+.|++++
T Consensus 85 TtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~ 164 (517)
T 3iyg_Z 85 TSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAV 164 (517)
T ss_pred eeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887 55 899999999864 58899999
Q ss_pred HHHHHhhccCC------c--eEeecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeecccc-------
Q 009601 224 AEAMSKVGRKG------V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI------- 288 (531)
Q Consensus 224 ~~A~~~v~~~g------~--I~v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i------- 288 (531)
+||+..+.+.+ . |...+|++..|+ ++++||+|+++|.||+ |+++++||+|+++|++|
T Consensus 165 vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~~k~e~ 236 (517)
T 3iyg_Z 165 VDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEYEKTEV 236 (517)
T ss_pred HHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEeccccccccccc
Confidence 99999886532 1 344689999999 9999999999999997 67889999999999975
Q ss_pred ------CCHHHH-----------HHHHHHHHhcCCC--------E-EEEeccchHHHHHHHHHHhhcccceEEEeecCCc
Q 009601 289 ------TNARDL-----------INVLEDAIRGAYP--------I-LIIAEDIEQEALATLVVNKLRGALKIAALKAPGF 342 (531)
Q Consensus 289 ------~~~~~l-----------~~~le~i~~~g~~--------l-vI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~ 342 (531)
++++++ .+.++++...+.+ + ||++++|+++++++|..+ +|++|+
T Consensus 237 ~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~v~---- 306 (517)
T 3iyg_Z 237 NSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIALR---- 306 (517)
T ss_pred ceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEEEE----
Confidence 344443 2345666555544 4 566799999999999876 456666
Q ss_pred CccccchHHHHHHHhCCeEEecCCCccccCCCCCC-CceeeEE---EEeCceEEEEcCCCChhhHHHHHHHHHHHHHhhh
Q 009601 343 GERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEV-LGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAE 418 (531)
Q Consensus 343 ~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~-lG~~~~v---~i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~ 418 (531)
++++.+|+|||++|||++++ +++++++++ ||+|+ | .+++++++||+||+++
T Consensus 307 -~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~------------------ 361 (517)
T 3iyg_Z 307 -RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNP------------------ 361 (517)
T ss_pred -ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCc------------------
Confidence 44689999999999999999 699999999 99999 9 4678999999999864
Q ss_pred hHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCCh
Q 009601 419 QDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDND 497 (531)
Q Consensus 419 ~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~ 497 (531)
..|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++.+|++++.+.++.
T Consensus 362 -----------------~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~ 424 (517)
T 3iyg_Z 362 -----------------RSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGR 424 (517)
T ss_pred -----------------hhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHH
Confidence 468999999999999999999999999999999999 99999999999999999999888787
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 498 EEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 498 eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+| +++++|++||+.+|+|||+|||+|+.+++.
T Consensus 425 eq-~~i~~~a~ALe~iP~~La~NaG~d~~~~v~ 456 (517)
T 3iyg_Z 425 AQ-LGVQAFADALLIIPKVLAQNSGFDLQETLV 456 (517)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 77 899999999999999999999999998875
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.8e-84 Score=713.84 Aligned_cols=395 Identities=22% Similarity=0.287 Sum_probs=361.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 009601 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (531)
Q Consensus 72 ~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 151 (531)
+++|..|+.||+.|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++||+++||||
T Consensus 25 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 100 (568)
T 3p9d_H 25 DGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA----VKVLVMATEQQKIDMGDGT 100 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH----HHHHHHHHHHHHTTSSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHhhhceeCCCc
Confidence 579999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhccccc----Cch-hhHHhhhhccC-----ChhhHhH
Q 009601 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV----EDS-ELADVAAVSAG-----NNYEVGN 221 (531)
Q Consensus 152 TtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v----~~~-~l~~va~ts~~-----~~~~l~~ 221 (531)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++++ ++. .|.++|+||++ ++++|++
T Consensus 101 TtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 180 (568)
T 3p9d_H 101 NLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSE 180 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHH
T ss_pred eehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999876 344 89999999864 3689999
Q ss_pred HHHHHHHhhccC-----C-------ceEe--ecCCCccceeEEEeeeEEeecccCCccccCcccCeeecc---ceeEeee
Q 009601 222 MIAEAMSKVGRK-----G-------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE---NCKLLLV 284 (531)
Q Consensus 222 li~~A~~~v~~~-----g-------~I~v--~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~---~~kIll~ 284 (531)
|+++|+.+++++ + .|++ .+|++++|| ++++||+|+++|. +|+++++ ||||+++
T Consensus 181 livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll 250 (568)
T 3p9d_H 181 LVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKKHKVAVF 250 (568)
T ss_dssp HHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSSCEEEEE
T ss_pred HHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCcceEEEE
Confidence 999999999874 3 4555 469999999 9999999999863 3777888 9999999
Q ss_pred ccc-------------cCCHHHHHH-----------HHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecC
Q 009601 285 DKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (531)
Q Consensus 285 d~~-------------i~~~~~l~~-----------~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~ 340 (531)
|++ |++++++.+ +++++.+.|+||||++++|+++++++|.++ +|+||+.|
T Consensus 251 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v 324 (568)
T 3p9d_H 251 TCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRY------GILVLKVP 324 (568)
T ss_dssp CSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCC
T ss_pred ccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC------CeEEEecC
Confidence 997 667777654 788999999999999999999999999886 57999877
Q ss_pred CcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE---eCceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 009601 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (531)
Q Consensus 341 ~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~ 417 (531)
+ +.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|.+|+.
T Consensus 325 ~-----~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------ 376 (568)
T 3p9d_H 325 S-----KFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQG------------------ 376 (568)
T ss_dssp C-----HHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEECBCCCCCSS------------------
T ss_pred C-----HHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCceEEEEecCCC------------------
Confidence 6 78999999999999999 589999999999999974 5689999999862
Q ss_pred hhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHH--cC-eeccCchhHhHHHHHHHHHhccC
Q 009601 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVE--EG-IVVGGGCTLLRLSSKVDAIKETL 494 (531)
Q Consensus 418 ~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~--~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (531)
|++++|||+|||+|+.+++|+||+++||||++|++++ ++ +|||||++|++++.+|++++.+.
T Consensus 377 ---------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~ 441 (568)
T 3p9d_H 377 ---------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERT 441 (568)
T ss_dssp ---------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTC
T ss_pred ---------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccC
Confidence 1257999999999999999999999999999999999 66 99999999999999999999888
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 442 ~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~ 476 (568)
T 3p9d_H 442 PGLLQ-LAIKQFAVAFEVVPRTLAETAGLDVNEVLP 476 (568)
T ss_dssp CSTHH-HHHHHHHHGGGHHHHHHHHHHTCCHHHHHH
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 88887 899999999999999999999999998874
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=6.6e-84 Score=707.32 Aligned_cols=400 Identities=23% Similarity=0.332 Sum_probs=355.7
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcc
Q 009601 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (531)
Q Consensus 65 ~i~~~~~~~a~~~~~~~v~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd 144 (531)
+...| .+++..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 11 ~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd 84 (546)
T 3p9d_F 11 ESLRR--DAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQD 84 (546)
T ss_dssp EEEEH--HHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHH
T ss_pred chhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 44455 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC----ch-hhHHhhhhccCC----
Q 009601 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE----DS-ELADVAAVSAGN---- 215 (531)
Q Consensus 145 ~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~G~~~a~~~~~~~L~~~s~~v~----~~-~l~~va~ts~~~---- 215 (531)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. .|.++|+||+++
T Consensus 85 ~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~ 164 (546)
T 3p9d_F 85 EITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDA 164 (546)
T ss_dssp HHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHH
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcch
Confidence 999999999999999999999999999999999999999999999999999999885 33 899999999874
Q ss_pred --hhhHhHHHHHHHHhhccC-------CceE--eecCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeee
Q 009601 216 --NYEVGNMIAEAMSKVGRK-------GVVT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (531)
Q Consensus 216 --~~~l~~li~~A~~~v~~~-------g~I~--v~~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~ 284 (531)
.+.|++++++|+..+.+. ..|. ..+|++..|| ++++||+|+++|.||+ |+++++||+|+++
T Consensus 165 ~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~ 236 (546)
T 3p9d_F 165 DLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLIL 236 (546)
T ss_dssp HHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEE
T ss_pred hHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEe
Confidence 478999999999998642 1233 3589999999 8999999999999984 7888999999999
Q ss_pred ccccC-------------CHHHH-----------HHHHHHHHh---------cCCC-EEEEeccchHHHHHHHHHHhhcc
Q 009601 285 DKKIT-------------NARDL-----------INVLEDAIR---------GAYP-ILIIAEDIEQEALATLVVNKLRG 330 (531)
Q Consensus 285 d~~i~-------------~~~~l-----------~~~le~i~~---------~g~~-lvI~~~~I~~~al~~L~~n~~~g 330 (531)
|++|+ +++++ .+.++.+.. .|.| |||++++|+++++++|..|+
T Consensus 237 ~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g--- 313 (546)
T 3p9d_F 237 NVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN--- 313 (546)
T ss_dssp CCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT---
T ss_pred cCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC---
Confidence 98753 22222 234566654 3455 66667899999999999884
Q ss_pred cceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEE---EeCceEEEEcCCCChhhHHHHH
Q 009601 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRV 407 (531)
Q Consensus 331 ~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~ri 407 (531)
|++|+ ++++.+|+|||++|||++++ +++++++++||+|+.|+ +++++++||+||+++
T Consensus 314 ---I~~vr-----~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------- 373 (546)
T 3p9d_F 314 ---ILALR-----RAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP------- 373 (546)
T ss_dssp ---CEEEC-----CCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC-------
T ss_pred ---CeeEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCC-------
Confidence 46666 45689999999999999999 68999999999999994 678999999999874
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHH
Q 009601 408 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSK 486 (531)
Q Consensus 408 ~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~ 486 (531)
..|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+
T Consensus 374 ----------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~ 425 (546)
T 3p9d_F 374 ----------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRY 425 (546)
T ss_dssp ----------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHH
T ss_pred ----------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHH
Confidence 589999999999999999999999999999999999 999999999999999
Q ss_pred HHH---HhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 487 VDA---IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 487 L~~---~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
|++ ++.+.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 426 L~~~~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~ 471 (546)
T 3p9d_F 426 LRSANMNKLGAKGKTK-TGIEAFAEALLVIPKTLVKNSGFDPLDVLA 471 (546)
T ss_dssp HHHHHTTTTTTTSHHH-HHHHHHHHHHHHHHHHHHTTTCCTTTTCCH
T ss_pred HHhhhhhhhcCchHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 998 5777888877 899999999999999999999999999875
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.2e-78 Score=655.94 Aligned_cols=366 Identities=23% Similarity=0.363 Sum_probs=294.5
Q ss_pred EeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHHHhcCCCcHHHHH
Q 009601 101 VLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 180 (531)
Q Consensus 101 mI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGTTtvvvLa~~LL~~a~~li~~Gi~p~~I~~ 180 (531)
||+++.|+|+|||||+||||+|+++||+ |||++++|++||+++||||||+||||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 7889999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCc--h-hhHHhhhhcc------CChhhHhHHHHHHHHhhccC--Cc--------eEee--
Q 009601 181 GIEKTSKALVSELKQMSKEVED--S-ELADVAAVSA------GNNYEVGNMIAEAMSKVGRK--GV--------VTLE-- 239 (531)
Q Consensus 181 G~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~------~~~~~l~~li~~A~~~v~~~--g~--------I~v~-- 239 (531)
||++|++.++++|++++++++. . .|.++|+|++ +++++|++|+++|+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 9999999999999999999874 4 8999999875 36899999999999999876 53 5554
Q ss_pred cCCCccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccc-------------cCCHHHH-----------H
Q 009601 240 EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDL-----------I 295 (531)
Q Consensus 240 ~G~~~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~-------------i~~~~~l-----------~ 295 (531)
+|++++|+ ++++||+|+++|.|||| +++++||||+++|++ |++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999998 99999999999999974 667899999999998 6667665 8
Q ss_pred HHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCC
Q 009601 296 NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGK 375 (531)
Q Consensus 296 ~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~ 375 (531)
++++++.+.|+||||++++|+++++++|..++ |+||+ ++++++|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 89999999999999999999999999999874 57774 77899999999999999998 6899999
Q ss_pred CCCceeeEEEEe---CceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHH
Q 009601 376 EVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKE 452 (531)
Q Consensus 376 ~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~~l~E 452 (531)
++||+|+.|++. ++++++|+||++ +++|||+|||+|+.+++|
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~t~~~l~E 337 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQN-----------------------------------SKAVTVLLHGGTEHVVDS 337 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETT-----------------------------------CCCEEEEEEESSHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCC-----------------------------------CceEEEEecCCcHHHHHH
Confidence 999999999874 899999999876 479999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcC-eeccCchhHhHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 009601 453 KKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSE 530 (531)
Q Consensus 453 ~~~~i~Dal~a~k~a~~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~ 530 (531)
+||+++||||++|+++++| +|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.
T Consensus 338 ~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~ 415 (500)
T 3aq1_B 338 LDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQ-LAVSKFAEALEVIPVALAENAGLDPIDIMV 415 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 9999999999999999999 9999999999999999999988888777 899999999999999999999999998875
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.5e-49 Score=366.28 Aligned_cols=193 Identities=48% Similarity=0.801 Sum_probs=189.6
Q ss_pred eEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHh
Q 009601 248 LYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNK 327 (531)
Q Consensus 248 ~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~ 327 (531)
+++++||.|||||+||||+|++++|.++++||+||++|.+|+++++++|+||.+.+.|.||+|++++|+++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEeCceEEEEcCCCChhhHHHHH
Q 009601 328 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRV 407 (531)
Q Consensus 328 ~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~~~g~~~~~~i~~ri 407 (531)
++|.++|+|||+|+||+.|+..|+|||++|||++++++.|+++++++.++||+|++|.+++|+|++++|.++++.|++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEE
Q 009601 408 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVI 440 (531)
Q Consensus 408 ~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI 440 (531)
+||+.+++.++++|+||+|+||+|+|+|++|+|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999999864
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=1.4e-47 Score=357.52 Aligned_cols=189 Identities=57% Similarity=0.892 Sum_probs=185.8
Q ss_pred EeeeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcc
Q 009601 251 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRG 330 (531)
Q Consensus 251 v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g 330 (531)
.+||.||+||+||||+|++++|.++++||+||++|.+|+++++++|+||.+.+.|.||+|++++|+++||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEeCceEEEEcCCCChhhHHHHHHHH
Q 009601 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQI 410 (531)
Q Consensus 331 ~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~~~g~~~~~~i~~ri~~l 410 (531)
.++|+|||+|+||+.|+..|+|||++|||++++++.|+++++++.++||+|++|.+++|+|++++|.++++.|++||+||
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhhcCCeEE
Q 009601 411 RTLIENAEQDYEREKLNERIAKLSGGVAV 439 (531)
Q Consensus 411 ~~~l~~~~~~~e~~~l~eRl~~l~g~~~t 439 (531)
+.+++.++++|+||+|+||||+|+|++|+
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999999999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=2.7e-36 Score=268.82 Aligned_cols=144 Identities=56% Similarity=0.922 Sum_probs=142.0
Q ss_pred eeEEeecccCCccccCcccCeeeccceeEeeeccccCCHHHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccc
Q 009601 253 GMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGAL 332 (531)
Q Consensus 253 G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~ 332 (531)
||.|||||+||||++++++|..+++||+||++|++|+++++++|+||++.+.|.||+|++++|+++||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEEeCceEEEEcC
Q 009601 333 KIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGD 396 (531)
Q Consensus 333 ~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~~~g 396 (531)
+++|||+|+||+.|+..|+|||.+|||++++++.|+++++++.++||+|++|.+++|+|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999975
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.87 E-value=2.6e-22 Score=189.09 Aligned_cols=146 Identities=17% Similarity=0.291 Sum_probs=120.6
Q ss_pred ccceeEEEeeeEEeecccCCccccCcccCeeeccceeEeeeccccC-------------CHHH-----------HHHHHH
Q 009601 244 AENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT-------------NARD-----------LINVLE 299 (531)
Q Consensus 244 ~~ds~~~v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~-------------~~~~-----------l~~~le 299 (531)
++|| ++++|++|++++.+| +||..++||||+++++++. ++++ +.++++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHP-------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSST-------TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCC-------CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 3678 899999999998876 4788899999999999753 2322 356788
Q ss_pred HHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCc
Q 009601 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (531)
Q Consensus 300 ~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG 379 (531)
++++.|+++||++++|++.++++|.++ +|+||+ ++++++|++||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRA------NVTAIR-----RVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHT------TCEEEC-----CCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHC------CCEEEe-----cCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 999999999999999999999999887 456666 66799999999999999999 69999999999
Q ss_pred e-eeEEE---EeCceEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEeCCCCHH
Q 009601 380 N-ASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTET 448 (531)
Q Consensus 380 ~-~~~v~---i~~~~~~~~~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~eRl~~l~g~~~tI~l~G~t~~ 448 (531)
+ |+.|+ ++++++++|+||+++ ..|||+|||+|..
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred CcccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 9 99997 468899999999763 5899999999854
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.78 E-value=8.5e-19 Score=162.06 Aligned_cols=126 Identities=22% Similarity=0.343 Sum_probs=108.7
Q ss_pred EeeeEEeecccCCccccCcccCeeeccceeEeeeccccC-------------CHHH-----------HHHHHHHHHhcCC
Q 009601 251 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT-------------NARD-----------LINVLEDAIRGAY 306 (531)
Q Consensus 251 v~G~~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~-------------~~~~-----------l~~~le~i~~~g~ 306 (531)
++|++|++++.+| +|++.++||||+++++++. ++++ +.+.++++++.|+
T Consensus 1 i~Gvv~~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHS-------KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCT-------TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCC-------CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 4799999998886 4788899999999999853 3433 3557889999999
Q ss_pred CEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCccccchHHHHHHHhCCeEEecCCCccccCCCCCCCceeeEEEE
Q 009601 307 PILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL 386 (531)
Q Consensus 307 ~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i 386 (531)
++||++++|++.++++|.++ +|+||+ ++++++|++||++|||++++ ++++++++.||+|+.|+.
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEc-----cCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 99999999999999999887 456666 66799999999999999999 689999999999999974
Q ss_pred ---eCceEEEEcCCCC
Q 009601 387 ---TKDTTTIVGDGST 399 (531)
Q Consensus 387 ---~~~~~~~~~g~~~ 399 (531)
+++++++|.||++
T Consensus 138 ~~ig~~~~~~~~g~~~ 153 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKN 153 (159)
T ss_dssp EEETTEEEEEEESCC-
T ss_pred EEECCeEEEEEECCCC
Confidence 6889999999976
No 32
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=20.43 E-value=1.5e+02 Score=24.74 Aligned_cols=75 Identities=13% Similarity=0.263 Sum_probs=46.8
Q ss_pred ccCCHHHHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHhhcccceEEEeecCCcCcccc----chHHHHHHHhCCeEE
Q 009601 287 KITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS----QYLDDIAILTGGTVI 362 (531)
Q Consensus 287 ~i~~~~~l~~~le~i~~~g~~lvI~~~~I~~~al~~L~~n~~~g~~~i~aVk~~~~~~~~~----~~L~~ia~~tGa~ii 362 (531)
..++.+++.+.++.+.+.++.+|++.+++-+..-..+.. ++....-.+|..|+...... ...+++.++.|..++
T Consensus 26 ~v~~~ee~~~~~~~l~~~digIIlIte~ia~~i~~~i~~--~~~~~~P~IveIPs~~g~~~~~~~~i~~~V~~aiG~di~ 103 (115)
T 3aon_B 26 HGTTKTEIRKTIDEMAKNEYGVIYITEQCANLVPETIER--YKGQLTPAIILIPSHQGTLGIGLEEIQNSVEKAVGQNIL 103 (115)
T ss_dssp CCCSHHHHHHHHHHHHHTTEEEEEEEHHHHTTCHHHHHH--HHTSSSCEEEEECBTTBCCSHHHHHHHHHHHHHTTCC--
T ss_pred EeCCHHHHHHHHHHHHhcCceEEEEeHHHHHHhHHHHHH--HhCCCCCEEEEECCCCCCCCccHHHHHHHHHHHhCcceE
Confidence 347788998888888866888999888776554443333 22222334566787543322 456778889998877
Q ss_pred e
Q 009601 363 R 363 (531)
Q Consensus 363 ~ 363 (531)
-
T Consensus 104 ~ 104 (115)
T 3aon_B 104 S 104 (115)
T ss_dssp -
T ss_pred e
Confidence 4
Done!