Query 009604
Match_columns 531
No_of_seqs 518 out of 3430
Neff 7.2
Searched_HMMs 46136
Date Thu Mar 28 15:07:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009604.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009604hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 9.5E-80 2.1E-84 639.3 39.0 377 152-531 7-395 (396)
2 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 6.5E-77 1.4E-81 624.3 37.1 373 154-529 1-386 (386)
3 COG2873 MET17 O-acetylhomoseri 100.0 1.9E-76 4E-81 590.9 32.9 376 152-531 7-426 (426)
4 PRK08114 cystathionine beta-ly 100.0 1.1E-72 2.4E-77 593.5 38.2 373 152-531 5-394 (395)
5 PRK08861 cystathionine gamma-s 100.0 2E-71 4.3E-76 585.3 38.9 369 152-531 5-384 (388)
6 KOG0053 Cystathionine beta-lya 100.0 6.9E-72 1.5E-76 573.5 33.4 378 149-531 18-407 (409)
7 PRK06702 O-acetylhomoserine am 100.0 5.1E-71 1.1E-75 587.1 39.1 373 153-529 7-423 (432)
8 PRK09028 cystathionine beta-ly 100.0 1.8E-70 3.9E-75 577.9 39.1 371 153-530 5-387 (394)
9 PRK05967 cystathionine beta-ly 100.0 5.4E-70 1.2E-74 573.6 38.8 366 152-530 12-391 (395)
10 PRK08249 cystathionine gamma-s 100.0 2.1E-69 4.5E-74 572.8 40.6 376 152-530 8-393 (398)
11 PRK08248 O-acetylhomoserine am 100.0 6.5E-69 1.4E-73 573.7 39.8 376 153-531 9-428 (431)
12 PRK05613 O-acetylhomoserine am 100.0 1.6E-68 3.4E-73 570.5 39.1 376 153-531 14-437 (437)
13 PRK07812 O-acetylhomoserine am 100.0 2.6E-68 5.6E-73 568.8 40.1 375 153-530 14-431 (436)
14 PRK08045 cystathionine gamma-s 100.0 3.6E-68 7.8E-73 561.3 39.9 370 151-531 3-383 (386)
15 TIGR01328 met_gam_lyase methio 100.0 7.3E-68 1.6E-72 560.2 40.5 376 153-531 4-391 (391)
16 PRK06084 O-acetylhomoserine am 100.0 1E-67 2.2E-72 563.8 39.8 375 153-530 3-422 (425)
17 PRK08134 O-acetylhomoserine am 100.0 1.2E-67 2.6E-72 563.9 40.3 376 152-530 8-427 (433)
18 PRK07810 O-succinylhomoserine 100.0 2.1E-67 4.4E-72 558.5 40.4 372 153-528 16-402 (403)
19 TIGR02080 O_succ_thio_ly O-suc 100.0 1.2E-66 2.7E-71 549.1 39.8 368 152-530 3-381 (382)
20 PRK08133 O-succinylhomoserine 100.0 2.2E-66 4.7E-71 548.9 40.0 374 153-530 7-390 (390)
21 PRK05939 hypothetical protein; 100.0 1.5E-66 3.2E-71 550.7 38.1 359 169-530 6-396 (397)
22 PRK08574 cystathionine gamma-s 100.0 2.1E-66 4.6E-71 547.8 39.2 370 153-531 3-385 (385)
23 PRK07504 O-succinylhomoserine 100.0 3.4E-66 7.3E-71 548.7 40.7 375 153-531 11-396 (398)
24 PRK07049 methionine gamma-lyas 100.0 4.2E-66 9.2E-71 552.0 40.6 376 153-530 18-426 (427)
25 PRK06176 cystathionine gamma-s 100.0 2.8E-66 6.1E-71 546.0 38.7 366 153-531 3-379 (380)
26 PRK07503 methionine gamma-lyas 100.0 4.8E-66 1E-70 548.4 40.3 375 153-530 10-396 (403)
27 TIGR01324 cysta_beta_ly_B cyst 100.0 6E-66 1.3E-70 542.5 40.3 365 155-531 1-377 (377)
28 PRK05994 O-acetylhomoserine am 100.0 1.2E-65 2.6E-70 548.7 40.7 376 152-530 7-426 (427)
29 PRK08776 cystathionine gamma-s 100.0 1.3E-65 2.9E-70 544.7 40.0 367 153-530 13-390 (405)
30 TIGR01325 O_suc_HS_sulf O-succ 100.0 1.3E-65 2.8E-70 541.5 39.4 370 154-528 1-380 (380)
31 PLN02509 cystathionine beta-ly 100.0 2.1E-65 4.5E-70 548.5 38.5 365 152-530 86-461 (464)
32 PRK06767 methionine gamma-lyas 100.0 4.2E-65 9.2E-70 538.6 40.4 371 152-531 5-386 (386)
33 PRK06434 cystathionine gamma-l 100.0 1.7E-65 3.8E-70 538.8 36.8 366 152-530 8-384 (384)
34 PRK06234 methionine gamma-lyas 100.0 6.1E-65 1.3E-69 539.6 40.9 376 153-531 9-398 (400)
35 PRK07671 cystathionine beta-ly 100.0 5.7E-65 1.2E-69 535.7 39.5 364 153-529 3-377 (377)
36 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 1.7E-64 3.7E-69 539.0 38.8 374 153-529 2-418 (418)
37 PRK06460 hypothetical protein; 100.0 3.9E-64 8.4E-69 529.4 40.1 364 152-531 2-375 (376)
38 TIGR01329 cysta_beta_ly_E cyst 100.0 4.2E-64 9.1E-69 529.4 38.7 364 154-531 2-376 (378)
39 cd00614 CGS_like CGS_like: Cys 100.0 5.6E-64 1.2E-68 527.2 38.3 358 171-529 1-369 (369)
40 PRK07811 cystathionine gamma-s 100.0 1.1E-63 2.4E-68 527.9 39.6 365 153-530 13-388 (388)
41 PRK07050 cystathionine beta-ly 100.0 2.4E-63 5.1E-68 526.1 37.7 370 152-530 9-391 (394)
42 PRK08064 cystathionine beta-ly 100.0 2.3E-62 5E-67 518.2 39.2 365 153-530 7-382 (390)
43 PLN02242 methionine gamma-lyas 100.0 9.9E-62 2.2E-66 516.8 38.6 371 153-530 18-415 (418)
44 PRK07269 cystathionine gamma-s 100.0 5.4E-61 1.2E-65 502.9 36.7 346 153-529 7-363 (364)
45 PRK05968 hypothetical protein; 100.0 1.6E-59 3.5E-64 496.4 37.6 363 156-530 12-386 (389)
46 PRK07582 cystathionine gamma-l 100.0 5.5E-59 1.2E-63 488.6 37.0 354 152-531 3-366 (366)
47 PRK08247 cystathionine gamma-s 100.0 1.3E-57 2.8E-62 478.4 37.7 351 151-530 3-364 (366)
48 COG1104 NifS Cysteine sulfinat 100.0 2.8E-27 6E-32 243.6 26.5 288 214-530 60-373 (386)
49 PRK10874 cysteine sulfinate de 99.9 1.5E-24 3.3E-29 230.2 30.6 277 216-530 82-394 (401)
50 COG0520 csdA Selenocysteine ly 99.9 2.8E-24 6E-29 227.8 30.9 280 217-530 85-401 (405)
51 PRK09295 bifunctional cysteine 99.9 2.4E-24 5.1E-29 229.2 29.4 278 216-530 86-400 (406)
52 TIGR03392 FeS_syn_CsdA cystein 99.9 3.7E-24 8E-29 227.0 29.8 277 216-530 79-391 (398)
53 PLN02855 Bifunctional selenocy 99.9 1.6E-23 3.4E-28 224.2 29.5 283 216-530 95-414 (424)
54 COG0436 Aspartate/tyrosine/aro 99.9 4.5E-23 9.7E-28 218.4 30.3 264 215-522 88-380 (393)
55 TIGR01979 sufS cysteine desulf 99.9 4.9E-23 1.1E-27 218.6 29.8 281 216-530 81-397 (403)
56 cd06453 SufS_like Cysteine des 99.9 3.6E-23 7.8E-28 217.1 28.3 277 216-528 62-373 (373)
57 PRK05957 aspartate aminotransf 99.9 9.4E-23 2E-27 215.9 29.7 269 217-529 91-384 (389)
58 PRK07324 transaminase; Validat 99.9 9.1E-23 2E-27 214.9 29.3 262 215-524 80-361 (373)
59 TIGR03403 nifS_epsilon cystein 99.9 8.3E-23 1.8E-27 215.5 28.0 286 216-530 61-371 (382)
60 PRK06207 aspartate aminotransf 99.9 1.4E-22 2.9E-27 215.9 29.0 269 216-529 103-401 (405)
61 TIGR00474 selA seryl-tRNA(sec) 99.9 5.5E-23 1.2E-27 220.6 23.9 198 214-417 136-371 (454)
62 PLN02651 cysteine desulfurase 99.9 1.7E-22 3.7E-27 211.9 27.1 278 216-522 61-364 (364)
63 TIGR03402 FeS_nifS cysteine de 99.9 3E-22 6.4E-27 211.0 28.7 284 216-530 60-368 (379)
64 PRK07681 aspartate aminotransf 99.9 3.1E-22 6.7E-27 212.6 28.5 252 217-514 95-370 (399)
65 TIGR01977 am_tr_V_EF2568 cyste 99.9 3.4E-22 7.3E-27 209.8 28.0 284 216-531 63-376 (376)
66 TIGR01976 am_tr_V_VC1184 cyste 99.9 6.1E-22 1.3E-26 209.7 29.7 278 217-528 79-397 (397)
67 PRK07179 hypothetical protein; 99.9 7.7E-22 1.7E-26 210.1 30.0 268 214-530 113-394 (407)
68 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 7.5E-22 1.6E-26 207.7 28.7 235 214-471 65-332 (370)
69 PRK02948 cysteine desulfurase; 99.9 6.5E-22 1.4E-26 208.5 28.3 287 216-530 61-370 (381)
70 PLN03227 serine palmitoyltrans 99.9 1.7E-21 3.7E-26 206.7 30.5 282 214-530 57-378 (392)
71 PRK06290 aspartate aminotransf 99.9 1E-21 2.2E-26 209.5 28.7 267 216-531 106-406 (410)
72 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 8.6E-22 1.9E-26 208.5 27.9 202 214-421 77-303 (387)
73 PRK05764 aspartate aminotransf 99.9 1.5E-21 3.2E-26 206.6 29.6 269 215-529 91-390 (393)
74 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.9E-21 4.1E-26 203.8 29.5 202 214-421 58-284 (361)
75 TIGR01822 2am3keto_CoA 2-amino 99.9 1.9E-21 4.1E-26 205.6 29.5 270 214-530 97-385 (393)
76 PRK06225 aspartate aminotransf 99.9 4.2E-21 9.2E-26 202.5 32.0 272 215-530 83-376 (380)
77 TIGR02006 IscS cysteine desulf 99.9 6E-22 1.3E-26 210.7 25.8 284 216-530 65-373 (402)
78 TIGR03540 DapC_direct LL-diami 99.9 4.7E-21 1E-25 202.2 32.0 254 216-515 91-369 (383)
79 PLN02721 threonine aldolase 99.9 1.8E-21 3.9E-26 202.3 28.2 268 214-529 54-347 (353)
80 PRK08960 hypothetical protein; 99.9 2.9E-21 6.4E-26 204.2 29.9 267 215-525 92-379 (387)
81 cd06454 KBL_like KBL_like; thi 99.9 2.6E-21 5.6E-26 200.6 28.4 270 214-530 60-347 (349)
82 PRK06108 aspartate aminotransf 99.9 3.8E-21 8.2E-26 202.4 29.1 260 215-520 84-369 (382)
83 PRK08361 aspartate aminotransf 99.9 2E-21 4.3E-26 205.8 27.0 257 215-515 93-373 (391)
84 COG1168 MalY Bifunctional PLP- 99.9 1.3E-20 2.9E-25 191.2 30.9 310 175-530 28-386 (388)
85 PRK15481 transcriptional regul 99.9 2.8E-21 6.1E-26 207.4 27.6 264 217-528 143-429 (431)
86 PRK14807 histidinol-phosphate 99.9 6.2E-21 1.3E-25 199.3 29.4 260 217-527 77-349 (351)
87 PRK05942 aspartate aminotransf 99.9 7E-21 1.5E-25 201.9 29.7 266 215-527 96-386 (394)
88 PRK06348 aspartate aminotransf 99.9 7.5E-21 1.6E-25 201.0 29.5 266 215-525 89-377 (384)
89 PRK04311 selenocysteine syntha 99.9 6.3E-22 1.4E-26 212.9 21.5 199 214-418 141-377 (464)
90 PLN03026 histidinol-phosphate 99.9 5E-21 1.1E-25 202.2 27.9 259 217-529 104-377 (380)
91 PRK07682 hypothetical protein; 99.9 3.4E-21 7.3E-26 203.0 26.4 268 217-529 83-375 (378)
92 PRK07337 aminotransferase; Val 99.9 7.5E-21 1.6E-25 201.1 29.1 266 215-524 90-380 (388)
93 TIGR03537 DapC succinyldiamino 99.9 1.1E-20 2.4E-25 197.2 29.8 237 215-476 59-318 (350)
94 PRK07550 hypothetical protein; 99.9 6.8E-21 1.5E-25 201.3 28.3 259 216-519 91-373 (386)
95 COG0079 HisC Histidinol-phosph 99.9 3.5E-21 7.7E-26 201.0 25.7 266 216-529 75-353 (356)
96 cd06451 AGAT_like Alanine-glyo 99.9 8.3E-21 1.8E-25 198.0 28.3 271 217-530 52-353 (356)
97 PRK04870 histidinol-phosphate 99.9 6.5E-21 1.4E-25 199.2 27.3 259 218-530 83-354 (356)
98 PRK07366 succinyldiaminopimela 99.9 8.4E-21 1.8E-25 200.8 28.3 261 215-521 91-378 (388)
99 PLN02187 rooty/superroot1 99.9 1.3E-20 2.8E-25 204.0 30.3 270 214-528 130-436 (462)
100 cd06502 TA_like Low-specificit 99.9 3.8E-21 8.3E-26 198.6 25.0 265 215-530 47-337 (338)
101 PLN00145 tyrosine/nicotianamin 99.9 2.7E-20 5.8E-25 199.8 32.1 264 215-525 117-416 (430)
102 TIGR00858 bioF 8-amino-7-oxono 99.9 2E-20 4.2E-25 194.5 29.7 268 214-529 75-360 (360)
103 PRK12414 putative aminotransfe 99.9 1.7E-20 3.7E-25 198.3 29.6 265 216-524 91-378 (384)
104 PRK08068 transaminase; Reviewe 99.9 1.1E-20 2.3E-25 200.1 28.1 261 217-524 96-380 (389)
105 PRK09276 LL-diaminopimelate am 99.9 1.6E-20 3.4E-25 198.4 28.8 262 216-524 93-379 (385)
106 TIGR01141 hisC histidinol-phos 99.9 5.7E-21 1.2E-25 198.6 24.8 260 215-528 71-345 (346)
107 PF00266 Aminotran_5: Aminotra 99.9 7.3E-21 1.6E-25 199.9 25.4 275 216-524 62-371 (371)
108 TIGR01437 selA_rel uncharacter 99.9 8.7E-21 1.9E-25 199.3 25.9 279 214-531 59-362 (363)
109 PLN02656 tyrosine transaminase 99.9 5.3E-20 1.1E-24 196.3 31.7 262 215-523 96-393 (409)
110 PRK03158 histidinol-phosphate 99.9 7.6E-21 1.7E-25 198.8 24.6 259 215-526 81-357 (359)
111 PLN00175 aminotransferase fami 99.9 4.1E-20 8.8E-25 197.4 30.5 256 217-514 117-395 (413)
112 PRK13392 5-aminolevulinate syn 99.9 2.4E-20 5.3E-25 198.8 28.7 269 214-530 105-393 (410)
113 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.9E-20 4E-25 194.6 26.9 288 214-529 32-352 (352)
114 PRK08912 hypothetical protein; 99.9 3.3E-20 7.2E-25 196.1 29.2 256 217-515 89-369 (387)
115 PRK05958 8-amino-7-oxononanoat 99.9 5.3E-20 1.1E-24 193.4 30.2 269 214-530 98-383 (385)
116 PRK07777 aminotransferase; Val 99.9 3.4E-20 7.5E-25 196.0 28.5 265 217-524 87-377 (387)
117 PRK09147 succinyldiaminopimela 99.9 3.5E-20 7.7E-25 196.6 28.5 255 218-515 92-379 (396)
118 TIGR01264 tyr_amTase_E tyrosin 99.9 7.5E-20 1.6E-24 194.4 30.6 268 215-529 95-398 (401)
119 PLN00143 tyrosine/nicotianamin 99.9 1.2E-19 2.6E-24 193.6 32.2 268 215-528 97-402 (409)
120 PLN02483 serine palmitoyltrans 99.9 1.1E-19 2.5E-24 197.7 32.5 269 214-529 160-461 (489)
121 PTZ00433 tyrosine aminotransfe 99.9 4.9E-20 1.1E-24 196.6 29.1 254 215-515 104-391 (412)
122 PRK04781 histidinol-phosphate 99.9 4.6E-20 1E-24 193.8 28.3 263 215-527 76-360 (364)
123 PRK07568 aspartate aminotransf 99.9 4.5E-20 9.8E-25 195.5 28.5 272 214-529 87-391 (397)
124 PRK01688 histidinol-phosphate 99.9 1.2E-20 2.5E-25 197.3 23.6 259 215-528 74-350 (351)
125 PRK00950 histidinol-phosphate 99.9 1.6E-20 3.5E-25 196.2 24.7 262 215-529 86-357 (361)
126 TIGR01265 tyr_nico_aTase tyros 99.9 7.9E-20 1.7E-24 194.5 30.1 254 215-515 96-384 (403)
127 PRK02731 histidinol-phosphate 99.9 1.4E-20 3.1E-25 197.2 23.8 261 217-528 85-364 (367)
128 PRK14012 cysteine desulfurase; 99.9 1.3E-20 2.9E-25 200.4 23.5 283 216-530 67-375 (404)
129 TIGR03538 DapC_gpp succinyldia 99.9 5.2E-20 1.1E-24 195.1 27.8 235 217-479 91-357 (393)
130 PRK07309 aromatic amino acid a 99.9 8.2E-20 1.8E-24 193.6 29.2 270 216-529 92-387 (391)
131 TIGR03235 DNA_S_dndA cysteine 99.9 3.1E-20 6.8E-25 193.8 25.4 266 216-512 60-353 (353)
132 PRK02610 histidinol-phosphate 99.9 3.4E-20 7.4E-25 195.4 25.4 262 215-530 91-371 (374)
133 PRK07683 aminotransferase A; V 99.9 1.8E-19 3.9E-24 190.7 30.7 257 217-519 91-369 (387)
134 PRK06939 2-amino-3-ketobutyrat 99.9 1.4E-19 3E-24 191.1 29.7 269 214-529 101-388 (397)
135 PRK08153 histidinol-phosphate 99.9 9E-20 1.9E-24 191.9 27.4 264 217-529 85-364 (369)
136 PRK13393 5-aminolevulinate syn 99.9 2.6E-19 5.7E-24 190.7 31.0 269 214-530 104-392 (406)
137 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.6E-19 3.5E-24 190.6 29.1 289 214-530 43-378 (380)
138 PRK09082 methionine aminotrans 99.9 6.3E-20 1.4E-24 194.1 25.9 260 217-520 93-376 (386)
139 TIGR01821 5aminolev_synth 5-am 99.9 1.9E-19 4E-24 191.5 29.5 269 214-530 104-392 (402)
140 PRK01533 histidinol-phosphate 99.9 2.1E-20 4.6E-25 196.5 22.0 253 217-529 82-354 (366)
141 PRK08175 aminotransferase; Val 99.9 1.2E-19 2.5E-24 192.7 27.5 262 218-524 93-380 (395)
142 PRK13355 bifunctional HTH-doma 99.9 2.4E-19 5.3E-24 196.8 30.9 198 216-420 209-436 (517)
143 PRK06425 histidinol-phosphate 99.9 6.4E-20 1.4E-24 190.3 24.8 255 218-528 59-331 (332)
144 PRK08363 alanine aminotransfer 99.9 2.7E-19 6E-24 189.9 30.2 200 215-420 93-318 (398)
145 PRK09265 aminotransferase AlaT 99.9 2.2E-19 4.7E-24 191.1 29.2 270 215-529 95-400 (404)
146 PRK04635 histidinol-phosphate 99.9 4.6E-20 9.9E-25 192.9 23.4 257 215-529 77-350 (354)
147 PRK09148 aminotransferase; Val 99.9 2.6E-19 5.7E-24 190.7 29.5 263 217-525 94-382 (405)
148 PRK09105 putative aminotransfe 99.9 1.2E-19 2.6E-24 191.1 26.6 259 214-528 94-368 (370)
149 PRK06107 aspartate aminotransf 99.9 2.7E-19 5.7E-24 190.4 29.4 200 215-420 93-317 (402)
150 PRK08056 threonine-phosphate d 99.9 1.2E-19 2.5E-24 190.0 25.9 263 215-529 72-354 (356)
151 PRK05387 histidinol-phosphate 99.9 1.2E-19 2.7E-24 189.1 25.9 260 215-528 77-351 (353)
152 TIGR01140 L_thr_O3P_dcar L-thr 99.9 9.3E-20 2E-24 188.9 24.7 253 217-528 65-329 (330)
153 COG0399 WecE Predicted pyridox 99.9 1.2E-19 2.5E-24 188.7 25.1 236 214-472 48-311 (374)
154 COG0156 BioF 7-keto-8-aminopel 99.9 4.4E-19 9.6E-24 185.6 29.5 270 214-531 98-387 (388)
155 TIGR02379 ECA_wecE TDP-4-keto- 99.9 2.7E-19 5.9E-24 188.8 28.3 292 214-530 45-373 (376)
156 cd00609 AAT_like Aspartate ami 99.9 5.1E-19 1.1E-23 182.2 29.4 268 215-529 59-349 (350)
157 PRK11658 UDP-4-amino-4-deoxy-L 99.9 4.2E-19 9.2E-24 187.6 29.2 289 214-530 47-375 (379)
158 PF01041 DegT_DnrJ_EryC1: DegT 99.9 5.3E-20 1.1E-24 193.3 22.2 290 214-529 39-363 (363)
159 TIGR01825 gly_Cac_T_rel pyrido 99.9 4.9E-19 1.1E-23 186.6 29.6 268 214-529 92-376 (385)
160 PRK05166 histidinol-phosphate 99.9 1.5E-19 3.2E-24 190.3 25.2 259 217-528 89-369 (371)
161 PRK09064 5-aminolevulinate syn 99.8 4.3E-19 9.3E-24 188.9 28.8 269 214-530 105-393 (407)
162 COG1167 ARO8 Transcriptional r 99.8 4.5E-19 9.7E-24 191.7 29.0 271 214-526 154-448 (459)
163 PRK08636 aspartate aminotransf 99.8 6.8E-19 1.5E-23 187.3 29.8 262 216-522 95-389 (403)
164 PLN02822 serine palmitoyltrans 99.8 1.1E-18 2.5E-23 189.6 31.6 273 214-529 168-472 (481)
165 PRK14809 histidinol-phosphate 99.8 4.6E-19 9.9E-24 185.5 26.9 257 214-528 81-355 (357)
166 PRK06836 aspartate aminotransf 99.8 7.7E-19 1.7E-23 186.3 29.0 264 215-529 96-390 (394)
167 TIGR03576 pyridox_MJ0158 pyrid 99.8 8.3E-19 1.8E-23 183.1 28.5 256 216-528 72-345 (346)
168 PTZ00377 alanine aminotransfer 99.8 1.1E-18 2.5E-23 189.9 30.5 200 215-420 138-388 (481)
169 TIGR03539 DapC_actino succinyl 99.8 7.2E-19 1.6E-23 184.1 27.4 247 216-515 81-345 (357)
170 PRK07865 N-succinyldiaminopime 99.8 7.3E-19 1.6E-23 184.4 27.4 244 218-514 88-350 (364)
171 PF00155 Aminotran_1_2: Aminot 99.8 3.6E-19 7.9E-24 185.8 24.9 261 215-526 67-361 (363)
172 TIGR01814 kynureninase kynuren 99.8 8E-19 1.7E-23 187.0 27.9 268 215-530 86-403 (406)
173 PLN02450 1-aminocyclopropane-1 99.8 1.1E-18 2.4E-23 189.2 29.0 271 214-529 110-429 (468)
174 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.6E-18 3.4E-23 183.0 29.0 292 214-530 45-372 (375)
175 PLN02409 serine--glyoxylate am 99.8 1E-18 2.2E-23 186.1 27.7 272 216-529 61-367 (401)
176 PRK05664 threonine-phosphate d 99.8 9.6E-19 2.1E-23 181.4 26.5 190 214-417 63-262 (330)
177 KOG1549 Cysteine desulfurase N 99.8 1.3E-19 2.9E-24 187.7 19.8 145 215-364 102-257 (428)
178 PRK13479 2-aminoethylphosphona 99.8 1.2E-18 2.7E-23 182.7 27.3 242 216-476 57-329 (368)
179 TIGR02326 transamin_PhnW 2-ami 99.8 1.5E-18 3.3E-23 181.7 28.0 269 217-529 56-357 (363)
180 PLN02955 8-amino-7-oxononanoat 99.8 3.7E-18 8E-23 182.6 31.2 266 214-530 161-457 (476)
181 PRK06358 threonine-phosphate d 99.8 1.3E-18 2.9E-23 182.0 27.2 260 215-528 71-353 (354)
182 PRK03317 histidinol-phosphate 99.8 6.8E-19 1.5E-23 184.9 24.8 193 218-417 90-298 (368)
183 PRK13034 serine hydroxymethylt 99.8 1.3E-18 2.8E-23 186.0 27.3 287 200-529 58-387 (416)
184 PRK03321 putative aminotransfe 99.8 4.1E-19 8.9E-24 185.3 22.0 257 217-530 75-351 (352)
185 PRK00854 rocD ornithine--oxo-a 99.8 2.5E-18 5.5E-23 182.6 28.0 268 214-529 97-396 (401)
186 PRK03967 histidinol-phosphate 99.8 1.3E-18 2.9E-23 180.8 24.9 249 215-529 72-333 (337)
187 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 6.7E-18 1.5E-22 175.3 29.2 271 217-530 52-353 (355)
188 PRK05839 hypothetical protein; 99.8 2.6E-18 5.6E-23 181.1 26.2 250 217-520 84-361 (374)
189 PLN02376 1-aminocyclopropane-1 99.8 4.6E-18 1E-22 185.4 28.7 270 214-528 118-436 (496)
190 cd00378 SHMT Serine-glycine hy 99.8 2.7E-18 5.8E-23 182.2 26.1 235 218-475 84-339 (402)
191 PLN02607 1-aminocyclopropane-1 99.8 5.5E-18 1.2E-22 182.7 28.9 271 214-529 119-436 (447)
192 PRK10534 L-threonine aldolase; 99.8 5.2E-18 1.1E-22 175.6 27.3 233 214-474 48-302 (333)
193 cd00613 GDC-P Glycine cleavage 99.8 5.9E-18 1.3E-22 179.2 28.0 269 217-528 83-398 (398)
194 PRK07392 threonine-phosphate d 99.8 4.2E-18 9.1E-23 178.5 26.6 262 215-529 74-358 (360)
195 TIGR03812 tyr_de_CO2_Arch tyro 99.8 8.7E-18 1.9E-22 176.2 28.7 262 216-531 77-373 (373)
196 KOG0257 Kynurenine aminotransf 99.8 9.5E-19 2.1E-23 179.4 20.5 210 202-417 63-326 (420)
197 PRK06855 aminotransferase; Val 99.8 3.3E-17 7.2E-22 176.1 32.9 200 214-419 95-327 (433)
198 PRK07908 hypothetical protein; 99.8 6.3E-18 1.4E-22 176.3 26.6 257 214-529 74-346 (349)
199 PRK13520 L-tyrosine decarboxyl 99.8 6.4E-18 1.4E-22 177.0 26.8 260 217-530 78-367 (371)
200 PRK09440 avtA valine--pyruvate 99.8 7.2E-18 1.6E-22 180.0 26.2 279 215-529 97-410 (416)
201 PRK00011 glyA serine hydroxyme 99.8 7E-18 1.5E-22 180.1 26.0 235 219-476 91-344 (416)
202 PRK08354 putative aminotransfe 99.8 8E-18 1.7E-22 173.0 25.2 147 216-374 55-205 (311)
203 PRK15407 lipopolysaccharide bi 99.8 2.6E-17 5.7E-22 176.9 29.7 241 214-476 77-377 (438)
204 cd06450 DOPA_deC_like DOPA dec 99.8 4.3E-18 9.4E-23 176.5 22.2 250 216-530 58-344 (345)
205 PRK05937 8-amino-7-oxononanoat 99.8 1.8E-17 3.8E-22 174.6 26.8 262 214-530 70-346 (370)
206 TIGR03542 DAPAT_plant LL-diami 99.8 1.8E-17 3.9E-22 176.3 27.2 262 215-523 95-394 (402)
207 KOG1368 Threonine aldolase [Am 99.8 6.7E-18 1.5E-22 165.6 21.6 302 178-528 26-362 (384)
208 PRK07590 L,L-diaminopimelate a 99.8 2.3E-17 5.1E-22 175.9 27.6 235 218-477 101-377 (409)
209 PRK06959 putative threonine-ph 99.8 1.4E-17 3E-22 173.5 24.3 248 217-529 72-332 (339)
210 PLN02231 alanine transaminase 99.8 7.2E-17 1.6E-21 177.3 30.9 202 215-421 191-441 (534)
211 PRK14808 histidinol-phosphate 99.8 1.4E-17 3.1E-22 173.0 23.6 221 217-474 77-308 (335)
212 PLN02724 Molybdenum cofactor s 99.8 2.6E-17 5.5E-22 189.2 27.8 295 218-530 100-484 (805)
213 COG2008 GLY1 Threonine aldolas 99.8 4.4E-17 9.6E-22 165.2 25.5 299 178-530 4-339 (342)
214 PTZ00094 serine hydroxymethylt 99.8 3.1E-17 6.7E-22 177.3 25.8 267 222-529 107-403 (452)
215 PRK00451 glycine dehydrogenase 99.8 7E-17 1.5E-21 174.1 27.5 268 217-530 131-444 (447)
216 PTZ00376 aspartate aminotransf 99.8 7E-17 1.5E-21 172.0 25.8 198 215-417 95-337 (404)
217 PLN02368 alanine transaminase 99.8 8.2E-17 1.8E-21 171.6 25.1 201 215-421 130-381 (407)
218 KOG0259 Tyrosine aminotransfer 99.8 3.2E-16 6.9E-21 158.5 27.7 269 214-525 125-428 (447)
219 PRK03244 argD acetylornithine 99.8 1.5E-16 3.2E-21 168.9 26.0 263 216-528 104-388 (398)
220 PRK09275 aspartate aminotransf 99.8 9.7E-17 2.1E-21 174.8 24.9 145 217-365 163-328 (527)
221 PLN02672 methionine S-methyltr 99.8 1.9E-16 4.2E-21 182.7 28.5 196 217-417 755-989 (1082)
222 TIGR03801 asp_4_decarbox aspar 99.8 8.5E-17 1.9E-21 175.0 24.2 145 217-365 157-327 (521)
223 cd00610 OAT_like Acetyl ornith 99.8 3.1E-16 6.7E-21 166.7 26.8 271 215-530 96-411 (413)
224 PRK13238 tnaA tryptophanase/L- 99.8 6E-16 1.3E-20 167.2 29.1 195 214-417 92-335 (460)
225 PRK08637 hypothetical protein; 99.8 8.5E-16 1.8E-20 162.8 29.8 153 216-372 70-257 (388)
226 PRK04073 rocD ornithine--oxo-a 99.7 3.1E-16 6.8E-21 166.6 26.0 266 214-530 96-393 (396)
227 cd00615 Orn_deC_like Ornithine 99.7 4E-17 8.7E-22 166.6 17.6 144 214-364 73-235 (294)
228 PRK09257 aromatic amino acid a 99.7 4.4E-16 9.4E-21 165.4 25.9 193 220-417 98-332 (396)
229 PTZ00125 ornithine aminotransf 99.7 1.9E-15 4.1E-20 160.4 28.4 236 215-471 88-359 (400)
230 PLN02397 aspartate transaminas 99.7 9.3E-16 2E-20 164.4 25.8 193 220-417 123-355 (423)
231 TIGR00707 argD acetylornithine 99.7 1.6E-15 3.5E-20 159.5 26.4 267 214-530 83-377 (379)
232 PRK01278 argD acetylornithine 99.7 2.6E-15 5.5E-20 159.1 25.8 268 215-530 88-388 (389)
233 PRK04366 glycine dehydrogenase 99.7 2.2E-15 4.8E-20 164.0 24.6 267 218-530 132-444 (481)
234 PRK07505 hypothetical protein; 99.7 1.3E-14 2.8E-19 154.5 28.7 174 214-394 105-297 (402)
235 PRK02627 acetylornithine amino 99.7 4.8E-15 1E-19 157.0 25.2 238 214-473 95-360 (396)
236 TIGR01788 Glu-decarb-GAD gluta 99.7 4.1E-15 8.9E-20 159.2 24.3 270 217-530 101-429 (431)
237 PRK13580 serine hydroxymethylt 99.7 7.2E-15 1.6E-19 157.7 25.9 229 221-474 117-398 (493)
238 cd00617 Tnase_like Tryptophana 99.7 4.7E-15 1E-19 158.6 24.4 196 214-417 67-310 (431)
239 cd01494 AAT_I Aspartate aminot 99.7 9.3E-16 2E-20 141.2 15.8 144 214-363 16-170 (170)
240 KOG0633 Histidinol phosphate a 99.7 6.2E-15 1.4E-19 142.5 21.4 269 216-527 86-374 (375)
241 COG0075 Serine-pyruvate aminot 99.7 2.9E-14 6.3E-19 148.4 27.2 197 217-417 58-284 (383)
242 PRK03080 phosphoserine aminotr 99.7 7.8E-15 1.7E-19 155.1 23.2 263 216-530 67-369 (378)
243 PRK02936 argD acetylornithine 99.7 2.6E-14 5.7E-19 150.6 26.7 261 216-530 87-375 (377)
244 PLN03032 serine decarboxylase; 99.6 4.3E-14 9.2E-19 148.7 26.0 193 218-417 88-314 (374)
245 PRK05093 argD bifunctional N-s 99.6 5.3E-14 1.2E-18 149.9 27.1 269 214-529 96-395 (403)
246 cd00611 PSAT_like Phosphoserin 99.6 1.6E-14 3.4E-19 151.5 22.0 261 216-531 63-353 (355)
247 PF06838 Met_gamma_lyase: Meth 99.6 7E-15 1.5E-19 149.2 17.8 237 214-468 68-332 (403)
248 PLN03226 serine hydroxymethylt 99.6 6.9E-14 1.5E-18 151.7 26.8 193 221-420 106-335 (475)
249 TIGR01885 Orn_aminotrans ornit 99.6 1.5E-13 3.3E-18 146.2 28.2 270 214-530 93-398 (401)
250 KOG0256 1-aminocyclopropane-1- 99.6 1.3E-13 2.8E-18 140.9 25.8 265 207-519 138-447 (471)
251 PRK02769 histidine decarboxyla 99.6 6.7E-14 1.4E-18 147.8 24.7 204 218-426 87-319 (380)
252 KOG1360 5-aminolevulinate synt 99.6 2.7E-14 5.8E-19 145.0 19.3 268 214-529 230-519 (570)
253 TIGR01364 serC_1 phosphoserine 99.6 5.8E-14 1.3E-18 146.9 22.6 260 216-530 56-344 (349)
254 TIGR03246 arg_catab_astC succi 99.6 2.7E-13 5.9E-18 144.2 28.1 268 214-528 91-389 (397)
255 TIGR03531 selenium_SpcS O-phos 99.6 7.2E-14 1.6E-18 149.5 23.5 195 217-417 125-344 (444)
256 PLN02271 serine hydroxymethylt 99.6 2.4E-13 5.1E-18 146.8 26.0 192 219-417 218-454 (586)
257 PRK05355 3-phosphoserine/phosp 99.6 7.4E-14 1.6E-18 146.7 20.8 259 217-530 68-354 (360)
258 PRK12381 bifunctional succinyl 99.6 6E-13 1.3E-17 142.0 28.0 268 214-528 95-393 (406)
259 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 1.5E-14 3.2E-19 152.7 15.3 160 214-380 80-274 (417)
260 PLN02414 glycine dehydrogenase 99.6 2.8E-13 6.2E-18 156.2 26.3 276 214-530 582-903 (993)
261 PF01212 Beta_elim_lyase: Beta 99.6 2.4E-15 5.2E-20 153.0 7.6 202 214-419 43-272 (290)
262 PRK04260 acetylornithine amino 99.6 8.3E-13 1.8E-17 139.3 26.6 261 217-530 86-373 (375)
263 PLN02624 ornithine-delta-amino 99.6 7.1E-13 1.5E-17 144.1 26.8 273 214-529 131-439 (474)
264 COG4992 ArgD Ornithine/acetylo 99.6 3E-13 6.5E-18 140.1 21.1 267 215-530 100-398 (404)
265 TIGR01366 serC_3 phosphoserine 99.6 2E-13 4.4E-18 143.5 20.3 267 217-530 61-356 (361)
266 PLN00144 acetylornithine trans 99.6 9.7E-13 2.1E-17 139.3 25.4 263 216-529 73-379 (382)
267 TIGR02618 tyr_phenol_ly tyrosi 99.5 8E-13 1.7E-17 140.2 23.6 210 200-420 63-330 (450)
268 KOG0634 Aromatic amino acid am 99.5 4.3E-12 9.2E-17 130.9 27.7 272 217-526 126-459 (472)
269 TIGR00713 hemL glutamate-1-sem 99.5 1.7E-12 3.6E-17 139.2 24.3 177 216-397 105-314 (423)
270 KOG1359 Glycine C-acetyltransf 99.5 5E-13 1.1E-17 131.3 16.7 268 214-530 126-408 (417)
271 TIGR03372 putres_am_tran putre 99.5 1E-11 2.2E-16 133.7 27.5 273 216-530 135-440 (442)
272 COG0112 GlyA Glycine/serine hy 99.5 4E-12 8.7E-17 130.2 21.6 197 214-417 86-303 (413)
273 PRK03715 argD acetylornithine 99.5 1.2E-11 2.6E-16 131.6 26.3 262 215-529 93-388 (395)
274 PRK15029 arginine decarboxylas 99.5 1.6E-12 3.4E-17 146.5 19.7 160 214-380 219-421 (755)
275 PRK04612 argD acetylornithine 99.5 1.2E-11 2.6E-16 132.1 25.5 238 216-470 99-366 (408)
276 TIGR03799 NOD_PanD_pyr putativ 99.5 1.8E-11 3.8E-16 134.2 26.1 203 216-424 160-426 (522)
277 KOG2862 Alanine-glyoxylate ami 99.5 2.4E-11 5.2E-16 120.6 24.3 196 218-417 71-301 (385)
278 PF00464 SHMT: Serine hydroxym 99.5 2.7E-12 5.9E-17 135.0 19.0 226 219-467 90-355 (399)
279 PRK05964 adenosylmethionine--8 99.5 2.3E-11 5E-16 130.6 26.3 269 215-529 102-417 (423)
280 COG1103 Archaea-specific pyrid 99.4 3E-12 6.4E-17 124.7 16.6 199 218-422 78-303 (382)
281 PRK11522 putrescine--2-oxoglut 99.4 2.5E-11 5.3E-16 131.4 25.2 272 215-528 141-445 (459)
282 PRK05367 glycine dehydrogenase 99.4 2.6E-11 5.7E-16 140.5 26.9 145 216-370 139-292 (954)
283 PRK05367 glycine dehydrogenase 99.4 1.1E-11 2.5E-16 143.5 23.5 276 214-530 556-871 (954)
284 COG4100 Cystathionine beta-lya 99.4 8.3E-12 1.8E-16 123.1 18.8 251 200-468 58-343 (416)
285 PRK08088 4-aminobutyrate amino 99.4 4E-11 8.6E-16 128.8 25.6 234 216-470 103-384 (425)
286 PRK09792 4-aminobutyrate trans 99.4 5.3E-11 1.1E-15 127.7 25.0 271 216-529 102-416 (421)
287 PF03841 SelA: L-seryl-tRNA se 99.4 5.8E-13 1.3E-17 136.8 9.0 155 214-374 61-237 (367)
288 PRK00062 glutamate-1-semialdeh 99.4 3.4E-11 7.4E-16 129.4 23.0 236 215-472 106-391 (426)
289 PLN02880 tyrosine decarboxylas 99.4 4.4E-11 9.5E-16 130.5 24.0 215 217-454 148-419 (490)
290 PRK08360 4-aminobutyrate amino 99.4 1.8E-10 3.8E-15 124.4 28.4 265 216-529 102-421 (443)
291 PRK13237 tyrosine phenol-lyase 99.4 2.7E-11 5.8E-16 129.0 21.4 208 200-417 70-335 (460)
292 PRK13578 ornithine decarboxyla 99.4 8.5E-12 1.8E-16 139.4 18.4 160 214-380 188-395 (720)
293 PRK08117 4-aminobutyrate amino 99.4 9.5E-11 2.1E-15 126.2 25.7 237 216-470 104-390 (433)
294 TIGR02407 ectoine_ectB diamino 99.4 1.4E-10 3.1E-15 124.0 26.4 265 217-530 100-408 (412)
295 PRK08593 4-aminobutyrate amino 99.4 1.9E-10 4.1E-15 124.2 27.5 265 216-529 104-424 (445)
296 TIGR00700 GABAtrnsam 4-aminobu 99.4 3.2E-10 6.9E-15 121.7 29.1 236 216-473 95-384 (420)
297 PLN02414 glycine dehydrogenase 99.4 5.9E-11 1.3E-15 137.3 24.9 146 215-370 165-320 (993)
298 KOG1357 Serine palmitoyltransf 99.4 1.8E-12 3.8E-17 134.1 11.0 196 214-417 196-424 (519)
299 PRK06777 4-aminobutyrate amino 99.4 2.5E-10 5.5E-15 122.5 28.0 242 215-474 101-386 (421)
300 PRK04013 argD acetylornithine/ 99.4 6E-11 1.3E-15 124.7 22.4 256 215-530 81-360 (364)
301 COG0001 HemL Glutamate-1-semia 99.4 6.4E-11 1.4E-15 124.0 22.0 199 214-416 108-341 (432)
302 PLN02590 probable tyrosine dec 99.4 2.9E-10 6.2E-15 124.7 26.8 216 216-454 195-467 (539)
303 TIGR00461 gcvP glycine dehydro 99.3 6.8E-11 1.5E-15 135.3 22.1 200 214-418 544-786 (939)
304 PRK06058 4-aminobutyrate amino 99.3 5.8E-10 1.3E-14 120.5 28.2 268 216-530 118-442 (443)
305 PRK09221 beta alanine--pyruvat 99.3 5E-10 1.1E-14 121.0 26.2 238 215-470 109-407 (445)
306 PRK07495 4-aminobutyrate amino 99.3 2.8E-10 6.2E-15 122.2 24.1 274 216-530 102-421 (425)
307 COG0076 GadB Glutamate decarbo 99.3 1.3E-10 2.8E-15 125.4 21.4 214 217-454 121-381 (460)
308 PRK09264 diaminobutyrate--2-ox 99.3 4.2E-10 9.1E-15 120.9 25.1 234 217-470 104-377 (425)
309 PRK13360 omega amino acid--pyr 99.3 1E-09 2.2E-14 118.5 28.0 199 215-416 106-361 (442)
310 PLN02263 serine decarboxylase 99.3 7.3E-10 1.6E-14 119.0 26.4 194 218-417 155-381 (470)
311 PRK15400 lysine decarboxylase 99.3 2E-10 4.4E-15 128.4 21.4 158 214-380 209-399 (714)
312 PRK06541 hypothetical protein; 99.3 1.1E-09 2.3E-14 118.9 26.5 220 216-453 113-386 (460)
313 PRK05965 hypothetical protein; 99.3 9E-10 1.9E-14 119.4 25.3 221 215-453 107-383 (459)
314 PRK12389 glutamate-1-semialdeh 99.3 1.3E-09 2.9E-14 117.1 26.5 198 215-416 109-340 (428)
315 COG1921 SelA Selenocysteine sy 99.3 9.5E-11 2.1E-15 121.5 16.7 177 214-396 82-269 (395)
316 COG0160 GabT 4-aminobutyrate a 99.3 1.6E-09 3.4E-14 115.4 26.1 270 215-530 117-445 (447)
317 PRK12403 putative aminotransfe 99.3 1E-09 2.2E-14 119.0 25.3 217 216-453 116-389 (460)
318 PLN02760 4-aminobutyrate:pyruv 99.3 1.9E-09 4E-14 118.1 27.4 221 216-454 152-429 (504)
319 PRK06918 4-aminobutyrate amino 99.3 2.2E-09 4.7E-14 116.3 27.4 271 216-529 116-442 (451)
320 PRK12566 glycine dehydrogenase 99.3 8.4E-10 1.8E-14 125.9 24.6 135 214-352 557-709 (954)
321 PRK07046 aminotransferase; Val 99.3 2.5E-09 5.4E-14 115.8 27.1 197 215-415 130-362 (453)
322 PRK07678 aminotransferase; Val 99.3 3.7E-09 7.9E-14 114.5 28.0 235 216-471 106-407 (451)
323 PRK06062 hypothetical protein; 99.2 2.9E-09 6.2E-14 115.3 27.0 180 215-397 112-334 (451)
324 TIGR00709 dat 2,4-diaminobutyr 99.2 3.6E-09 7.8E-14 114.3 27.3 214 217-453 103-366 (442)
325 PRK05639 4-aminobutyrate amino 99.2 5.6E-09 1.2E-13 113.1 28.0 266 216-529 114-438 (457)
326 PRK06105 aminotransferase; Pro 99.2 4.7E-09 1E-13 113.9 27.2 220 216-453 110-386 (460)
327 PRK07482 hypothetical protein; 99.2 5.7E-09 1.2E-13 113.3 27.8 218 215-453 111-389 (461)
328 PRK06943 adenosylmethionine--8 99.2 5.5E-09 1.2E-13 113.1 27.3 235 216-468 115-408 (453)
329 PRK05769 4-aminobutyrate amino 99.2 7.8E-09 1.7E-13 111.6 28.4 266 216-529 116-434 (441)
330 PRK07986 adenosylmethionine--8 99.2 3.4E-09 7.5E-14 113.9 25.5 236 215-470 103-387 (428)
331 PRK15399 lysine decarboxylase 99.2 5.6E-10 1.2E-14 124.9 19.4 157 214-380 209-399 (713)
332 PRK05630 adenosylmethionine--8 99.2 4.7E-09 1E-13 112.7 25.4 236 215-470 100-384 (422)
333 TIGR03251 LAT_fam L-lysine 6-t 99.2 2.9E-09 6.4E-14 114.6 23.9 268 216-531 104-431 (431)
334 PRK06173 adenosylmethionine--8 99.2 5.6E-09 1.2E-13 112.3 25.6 268 215-530 104-425 (429)
335 COG3977 Alanine-alpha-ketoisov 99.2 2.6E-09 5.7E-14 105.7 20.6 280 215-529 96-410 (417)
336 PLN02482 glutamate-1-semialdeh 99.2 2.6E-09 5.7E-14 116.0 22.9 197 215-416 155-386 (474)
337 PRK00615 glutamate-1-semialdeh 99.2 3.7E-09 8E-14 113.8 23.1 195 216-415 111-340 (433)
338 PRK06082 4-aminobutyrate amino 99.2 1.4E-08 3E-13 110.2 27.3 221 216-453 131-390 (459)
339 PRK07481 hypothetical protein; 99.2 1.5E-08 3.3E-13 109.7 27.3 220 215-453 104-382 (449)
340 PF00282 Pyridoxal_deC: Pyrido 99.2 1.3E-09 2.8E-14 115.1 18.1 205 216-426 104-363 (373)
341 TIGR00508 bioA adenosylmethion 99.2 1.1E-08 2.4E-13 110.1 25.3 236 216-470 106-390 (427)
342 PRK06149 hypothetical protein; 99.1 2.9E-08 6.2E-13 116.9 30.4 270 215-530 641-970 (972)
343 TIGR01365 serC_2 phosphoserine 99.1 6.9E-09 1.5E-13 109.4 22.4 261 218-529 61-368 (374)
344 PRK06938 diaminobutyrate--2-ox 99.1 2E-08 4.4E-13 109.1 26.5 212 217-453 128-391 (464)
345 PRK07030 adenosylmethionine--8 99.1 1.4E-08 3.1E-13 110.3 25.3 220 216-453 108-383 (466)
346 PRK07036 hypothetical protein; 99.1 3.1E-08 6.7E-13 107.7 27.9 221 215-453 112-389 (466)
347 TIGR00461 gcvP glycine dehydro 99.1 7.8E-09 1.7E-13 118.7 23.9 255 218-529 129-426 (939)
348 PRK08742 adenosylmethionine--8 99.1 1.9E-08 4.1E-13 109.4 25.7 221 216-453 130-404 (472)
349 PRK07480 putative aminotransfe 99.1 2.3E-08 5E-13 108.4 26.1 221 215-453 111-385 (456)
350 PRK06916 adenosylmethionine--8 99.1 2.4E-08 5.2E-13 108.4 25.6 220 216-453 117-392 (460)
351 COG0403 GcvP Glycine cleavage 99.1 4.5E-08 9.8E-13 101.6 25.6 145 220-369 142-296 (450)
352 PF00202 Aminotran_3: Aminotra 99.1 4.3E-09 9.4E-14 109.8 18.2 217 215-453 76-338 (339)
353 COG1982 LdcC Arginine/lysine/o 99.1 1.5E-08 3.3E-13 109.6 22.1 143 214-363 84-246 (557)
354 PRK06931 diaminobutyrate--2-ox 99.1 7.4E-08 1.6E-12 104.6 27.1 211 218-453 123-385 (459)
355 PLN02452 phosphoserine transam 99.1 2.3E-08 4.9E-13 105.3 22.0 224 218-471 73-325 (365)
356 COG3844 Kynureninase [Amino ac 99.0 1.4E-08 3.1E-13 101.8 19.0 149 214-363 92-244 (407)
357 PRK06917 hypothetical protein; 99.0 1.5E-07 3.1E-12 102.0 28.6 221 216-453 92-366 (447)
358 KOG1358 Serine palmitoyltransf 99.0 7.2E-09 1.6E-13 106.0 16.8 167 214-388 153-343 (467)
359 TIGR00699 GABAtrns_euk 4-amino 99.0 2.6E-08 5.6E-13 107.9 22.0 259 216-530 123-462 (464)
360 PRK07483 hypothetical protein; 99.0 1.2E-07 2.6E-12 102.5 26.4 217 216-453 91-366 (443)
361 COG0161 BioA Adenosylmethionin 99.0 3.5E-08 7.6E-13 104.7 21.5 271 215-530 105-443 (449)
362 PF02347 GDC-P: Glycine cleava 99.0 3.8E-08 8.2E-13 104.4 21.7 185 226-417 141-364 (429)
363 PRK08297 L-lysine aminotransfe 99.0 1.3E-07 2.8E-12 102.3 25.8 234 215-470 110-404 (443)
364 PRK06148 hypothetical protein; 99.0 1.3E-07 2.8E-12 111.7 26.9 237 216-471 681-972 (1013)
365 KOG1402 Ornithine aminotransfe 98.9 2E-07 4.4E-12 93.7 21.9 237 214-470 115-390 (427)
366 TIGR02617 tnaA_trp_ase tryptop 98.9 5E-08 1.1E-12 103.3 18.5 227 178-417 46-344 (467)
367 PLN02974 adenosylmethionine-8- 98.9 3.9E-07 8.5E-12 104.6 25.8 158 276-454 567-758 (817)
368 PRK06209 glutamate-1-semialdeh 98.9 1.3E-07 2.8E-12 101.9 20.6 195 216-415 105-327 (431)
369 KOG1401 Acetylornithine aminot 98.9 3.2E-07 6.9E-12 94.8 21.3 198 214-415 115-346 (433)
370 PF12897 Aminotran_MocR: Alani 98.8 7.4E-07 1.6E-11 92.0 23.3 271 214-525 85-407 (425)
371 KOG2467 Glycine/serine hydroxy 98.8 3E-07 6.4E-12 93.6 19.4 191 220-417 111-340 (477)
372 KOG1404 Alanine-glyoxylate ami 98.8 6.3E-07 1.4E-11 92.1 19.7 244 216-478 110-407 (442)
373 TIGR03811 tyr_de_CO2_Ent tyros 98.7 9.3E-06 2E-10 90.5 29.6 170 241-417 224-475 (608)
374 PRK12462 phosphoserine aminotr 98.7 3.6E-06 7.7E-11 88.4 24.5 224 218-471 70-324 (364)
375 PRK12566 glycine dehydrogenase 98.7 2.7E-06 5.8E-11 97.7 24.4 133 226-370 155-294 (954)
376 PF04864 Alliinase_C: Allinase 98.6 1.2E-06 2.6E-11 89.3 15.6 279 207-530 59-361 (363)
377 COG1448 TyrB Aspartate/tyrosin 98.5 1.4E-05 2.9E-10 82.6 21.4 231 217-467 96-366 (396)
378 KOG1383 Glutamate decarboxylas 98.5 1E-06 2.2E-11 92.5 12.9 264 220-530 143-446 (491)
379 KOG0628 Aromatic-L-amino-acid/ 98.3 4.4E-05 9.5E-10 80.3 18.0 233 214-468 138-427 (511)
380 PF05889 SLA_LP_auto_ag: Solub 98.3 6.6E-06 1.4E-10 85.8 11.9 154 215-374 74-249 (389)
381 KOG0258 Alanine aminotransfera 98.2 4.9E-06 1.1E-10 85.5 9.6 143 215-361 136-310 (475)
382 COG1003 GcvP Glycine cleavage 98.2 1.6E-05 3.5E-10 83.0 12.1 106 240-350 158-270 (496)
383 KOG0629 Glutamate decarboxylas 97.6 0.00062 1.3E-08 71.2 12.6 202 216-423 160-419 (510)
384 KOG1405 4-aminobutyrate aminot 97.6 0.0011 2.5E-08 67.7 14.0 178 275-478 255-452 (484)
385 KOG3846 L-kynurenine hydrolase 97.4 0.0017 3.7E-08 65.3 11.3 149 216-364 129-293 (465)
386 KOG1403 Predicted alanine-glyo 97.4 0.0014 3E-08 65.8 10.6 272 214-529 101-436 (452)
387 KOG2040 Glycine dehydrogenase 97.4 0.0023 5E-08 69.9 13.1 244 219-466 602-912 (1001)
388 KOG2040 Glycine dehydrogenase 97.3 0.00079 1.7E-08 73.4 9.0 125 218-348 183-309 (1001)
389 KOG1412 Aspartate aminotransfe 97.2 0.11 2.4E-06 52.7 21.7 149 218-370 102-278 (410)
390 COG1932 SerC Phosphoserine ami 97.1 0.037 7.9E-07 57.4 17.7 168 317-529 171-362 (365)
391 COG3033 TnaA Tryptophanase [Am 96.1 0.07 1.5E-06 55.2 11.8 196 214-417 93-346 (471)
392 KOG1411 Aspartate aminotransfe 96.0 0.15 3.3E-06 52.5 13.5 148 219-370 124-298 (427)
393 PLN02994 1-aminocyclopropane-1 94.1 0.063 1.4E-06 49.7 4.4 38 214-251 116-153 (153)
394 KOG3843 Predicted serine hydro 93.8 0.25 5.3E-06 49.2 8.0 98 274-374 142-251 (432)
395 PF02310 B12-binding: B12 bind 85.6 2.3 4.9E-05 36.9 6.2 88 254-343 18-110 (121)
396 cd02067 B12-binding B12 bindin 80.3 8.5 0.00018 33.4 7.7 90 254-345 17-110 (119)
397 PRK13396 3-deoxy-7-phosphohept 71.7 28 0.00061 36.7 9.9 56 274-329 220-284 (352)
398 PF05368 NmrA: NmrA-like famil 68.8 29 0.00062 33.6 8.9 92 223-321 7-99 (233)
399 cd04736 MDH_FMN Mandelate dehy 66.7 24 0.00051 37.4 8.2 83 256-342 228-316 (361)
400 cd00532 MGS-like MGS-like doma 66.6 41 0.0009 29.0 8.5 87 228-323 14-106 (112)
401 PRK12595 bifunctional 3-deoxy- 62.4 47 0.001 35.1 9.5 85 254-339 216-317 (360)
402 PRK13397 3-deoxy-7-phosphohept 59.4 74 0.0016 31.9 9.8 44 286-329 150-197 (250)
403 cd02068 radical_SAM_B12_BD B12 58.3 41 0.0009 29.4 7.1 82 258-342 10-95 (127)
404 TIGR02026 BchE magnesium-proto 55.4 27 0.0006 38.5 6.6 83 258-343 30-121 (497)
405 COG0036 Rpe Pentose-5-phosphat 55.3 2.1E+02 0.0045 28.2 11.8 109 230-342 75-195 (220)
406 COG0552 FtsY Signal recognitio 54.0 56 0.0012 34.1 8.1 131 226-362 154-305 (340)
407 cd02071 MM_CoA_mut_B12_BD meth 53.7 53 0.0011 28.7 7.0 92 253-346 16-111 (122)
408 cd05013 SIS_RpiR RpiR-like pro 53.3 1.1E+02 0.0025 26.2 9.2 56 260-320 35-91 (139)
409 PRK08091 ribulose-phosphate 3- 53.3 1.6E+02 0.0034 29.2 10.8 107 232-342 84-205 (228)
410 CHL00200 trpA tryptophan synth 51.2 1E+02 0.0022 31.1 9.4 81 240-322 121-208 (263)
411 TIGR01305 GMP_reduct_1 guanosi 51.1 1.4E+02 0.003 31.3 10.4 124 219-344 98-241 (343)
412 cd01078 NAD_bind_H4MPT_DH NADP 50.7 1.5E+02 0.0034 27.8 10.3 105 216-329 29-134 (194)
413 PRK05234 mgsA methylglyoxal sy 50.3 1.3E+02 0.0027 27.5 9.0 88 228-324 19-114 (142)
414 TIGR00640 acid_CoA_mut_C methy 50.1 72 0.0016 28.6 7.3 72 248-321 14-89 (132)
415 PLN02274 inosine-5'-monophosph 49.6 87 0.0019 34.8 9.3 109 233-342 254-378 (505)
416 cd04795 SIS SIS domain. SIS (S 48.4 83 0.0018 24.9 6.9 53 264-321 25-79 (87)
417 PF13460 NAD_binding_10: NADH( 47.8 83 0.0018 28.8 7.7 88 219-317 2-90 (183)
418 COG2099 CobK Precorrin-6x redu 46.9 57 0.0012 32.7 6.6 93 219-321 5-98 (257)
419 PRK05096 guanosine 5'-monophos 46.8 1.9E+02 0.004 30.5 10.5 139 219-360 99-256 (346)
420 PRK08745 ribulose-phosphate 3- 46.2 2.1E+02 0.0045 28.1 10.5 107 232-342 78-197 (223)
421 PF15608 PELOTA_1: PELOTA RNA 45.9 65 0.0014 27.6 5.9 66 253-324 22-88 (100)
422 cd01422 MGS Methylglyoxal synt 45.3 2.1E+02 0.0045 24.9 9.5 75 239-321 27-106 (115)
423 PTZ00314 inosine-5'-monophosph 44.9 96 0.0021 34.3 8.7 121 220-342 235-371 (495)
424 COG1606 ATP-utilizing enzymes 44.6 57 0.0012 32.8 6.1 100 216-327 19-124 (269)
425 COG0296 GlgB 1,4-alpha-glucan 44.5 19 0.00042 40.7 3.3 38 287-326 200-237 (628)
426 PRK08883 ribulose-phosphate 3- 43.6 1.8E+02 0.0039 28.5 9.6 106 233-342 75-193 (220)
427 TIGR00262 trpA tryptophan synt 42.5 1.7E+02 0.0036 29.4 9.4 60 240-301 117-178 (256)
428 PRK05567 inosine 5'-monophosph 42.0 96 0.0021 34.1 8.2 110 232-342 233-358 (486)
429 COG1087 GalE UDP-glucose 4-epi 39.4 1.4E+02 0.003 30.9 8.2 97 218-318 2-111 (329)
430 COG0514 RecQ Superfamily II DN 39.4 94 0.002 35.1 7.6 102 214-326 32-142 (590)
431 PF10087 DUF2325: Uncharacteri 38.4 95 0.0021 25.9 5.9 61 255-322 14-81 (97)
432 smart00642 Aamy Alpha-amylase 38.3 29 0.00064 32.3 3.0 29 298-326 65-93 (166)
433 PF14258 DUF4350: Domain of un 38.2 1.5E+02 0.0033 22.9 6.7 65 251-322 6-70 (70)
434 PF02142 MGS: MGS-like domain 37.4 30 0.00064 28.9 2.6 79 233-320 7-94 (95)
435 PF00834 Ribul_P_3_epim: Ribul 36.3 93 0.002 30.1 6.2 106 234-343 75-193 (201)
436 COG2876 AroA 3-deoxy-D-arabino 36.1 1.1E+02 0.0025 30.8 6.8 46 283-328 177-226 (286)
437 PF03435 Saccharop_dh: Sacchar 36.1 1.8E+02 0.004 30.6 9.0 93 219-322 2-96 (386)
438 TIGR01361 DAHP_synth_Bsub phos 35.7 2.9E+02 0.0063 27.8 9.9 80 261-340 129-225 (260)
439 TIGR00715 precor6x_red precorr 35.1 1.4E+02 0.0029 30.1 7.4 92 219-320 3-96 (256)
440 COG1748 LYS9 Saccharopine dehy 35.0 2.5E+02 0.0054 30.1 9.6 109 216-329 2-129 (389)
441 smart00851 MGS MGS-like domain 34.8 2.3E+02 0.005 23.1 7.6 79 232-320 6-89 (90)
442 PRK02261 methylaspartate mutas 34.7 1.3E+02 0.0028 27.1 6.5 61 253-315 20-81 (137)
443 cd03332 LMO_FMN L-Lactate 2-mo 34.4 1.6E+02 0.0034 31.6 8.0 80 259-342 248-335 (383)
444 cd04726 KGPDC_HPS 3-Keto-L-gul 34.4 2.6E+02 0.0057 26.2 9.1 106 234-342 72-184 (202)
445 PRK06843 inosine 5-monophospha 33.9 2E+02 0.0043 31.0 8.7 111 231-342 157-283 (404)
446 PRK13398 3-deoxy-7-phosphohept 33.7 2.3E+02 0.005 28.6 8.8 43 286-328 162-208 (266)
447 PRK07807 inosine 5-monophospha 33.6 1.7E+02 0.0038 32.2 8.5 112 230-342 230-357 (479)
448 TIGR01302 IMP_dehydrog inosine 33.6 1.4E+02 0.0031 32.5 7.8 108 234-342 231-354 (450)
449 cd02065 B12-binding_like B12 b 33.3 2.5E+02 0.0055 23.8 8.1 83 255-342 18-103 (125)
450 PRK13307 bifunctional formalde 33.3 3.7E+02 0.008 28.8 10.6 83 258-342 270-356 (391)
451 PRK08673 3-deoxy-7-phosphohept 32.5 3.1E+02 0.0066 28.8 9.7 80 260-339 196-292 (335)
452 PRK04296 thymidine kinase; Pro 32.4 1.5E+02 0.0032 28.1 6.9 94 226-323 18-113 (190)
453 COG1737 RpiR Transcriptional r 32.4 3.6E+02 0.0077 27.2 10.1 78 258-344 150-228 (281)
454 TIGR01182 eda Entner-Doudoroff 32.4 3.5E+02 0.0076 26.2 9.4 101 229-341 23-125 (204)
455 PF01596 Methyltransf_3: O-met 32.3 1.2E+02 0.0026 29.4 6.3 108 214-327 45-159 (205)
456 PF00478 IMPDH: IMP dehydrogen 31.9 56 0.0012 34.5 4.1 119 233-354 114-248 (352)
457 PRK11557 putative DNA-binding 31.9 4.8E+02 0.01 25.9 10.9 73 260-343 150-225 (278)
458 PF00128 Alpha-amylase: Alpha 31.8 31 0.00067 34.3 2.2 31 295-325 44-74 (316)
459 PF00290 Trp_syntA: Tryptophan 31.4 2.2E+02 0.0048 28.7 8.1 80 240-321 117-203 (259)
460 TIGR01306 GMP_reduct_2 guanosi 31.1 5.5E+02 0.012 26.7 11.2 123 219-343 85-226 (321)
461 PRK06222 ferredoxin-NADP(+) re 30.9 3E+02 0.0065 27.7 9.2 107 205-320 87-208 (281)
462 cd02072 Glm_B12_BD B12 binding 30.6 1.5E+02 0.0032 26.6 6.0 67 248-316 11-78 (128)
463 PRK14057 epimerase; Provisiona 30.5 3.8E+02 0.0082 27.0 9.6 71 270-343 140-220 (254)
464 PRK09441 cytoplasmic alpha-amy 30.4 43 0.00093 36.7 3.2 31 295-325 73-103 (479)
465 PF01408 GFO_IDH_MocA: Oxidore 29.7 93 0.002 26.4 4.6 10 287-296 63-72 (120)
466 KOG4589 Cell division protein 29.6 3.2E+02 0.0069 26.5 8.2 44 271-314 118-165 (232)
467 cd05008 SIS_GlmS_GlmD_1 SIS (S 29.6 96 0.0021 26.6 4.7 23 298-320 55-77 (126)
468 cd00150 PlantTI Plant trypsin 29.4 25 0.00054 22.5 0.6 15 8-30 1-15 (27)
469 COG2870 RfaE ADP-heptose synth 29.3 83 0.0018 33.7 4.8 44 277-324 136-179 (467)
470 TIGR01501 MthylAspMutase methy 29.3 1.5E+02 0.0034 26.7 6.0 67 248-316 13-80 (134)
471 COG1091 RfbD dTDP-4-dehydrorha 29.0 2.3E+02 0.0049 29.0 7.8 52 270-321 34-97 (281)
472 PF08423 Rad51: Rad51; InterP 28.9 1.6E+02 0.0034 29.4 6.7 97 226-323 54-185 (256)
473 PLN02591 tryptophan synthase 28.9 4E+02 0.0087 26.6 9.5 85 235-321 102-194 (250)
474 KOG1371 UDP-glucose 4-epimeras 28.8 1.3E+02 0.0028 31.4 6.0 103 218-321 4-124 (343)
475 TIGR03649 ergot_EASG ergot alk 28.6 2.5E+02 0.0053 27.9 8.1 54 264-318 40-98 (285)
476 PRK02705 murD UDP-N-acetylmura 28.5 3.1E+02 0.0068 29.5 9.5 96 218-322 3-98 (459)
477 PRK12724 flagellar biosynthesi 28.2 2.6E+02 0.0056 30.4 8.4 99 227-327 240-346 (432)
478 PF07085 DRTGG: DRTGG domain; 27.8 1.6E+02 0.0034 24.8 5.6 45 270-321 46-90 (105)
479 cd04724 Tryptophan_synthase_al 27.6 4.1E+02 0.0088 26.2 9.3 91 233-325 98-196 (242)
480 COG1066 Sms Predicted ATP-depe 27.5 5.7E+02 0.012 27.8 10.6 86 233-321 115-215 (456)
481 PRK05802 hypothetical protein; 27.2 2.1E+02 0.0047 29.5 7.5 97 216-320 173-283 (320)
482 TIGR02402 trehalose_TreZ malto 27.2 51 0.0011 36.9 3.0 33 294-326 151-183 (542)
483 TIGR00160 MGSA methylglyoxal s 27.1 1.1E+02 0.0024 28.0 4.6 49 276-324 63-112 (143)
484 TIGR00649 MG423 conserved hypo 26.8 2.6E+02 0.0057 29.9 8.4 76 237-317 317-401 (422)
485 PLN00191 enolase 26.8 3.9E+02 0.0084 29.3 9.6 98 223-323 296-395 (457)
486 PRK09722 allulose-6-phosphate 26.6 4.1E+02 0.009 26.2 9.0 107 233-343 76-196 (229)
487 PLN02535 glycolate oxidase 26.5 2.3E+02 0.005 30.1 7.6 79 261-343 220-306 (364)
488 cd00381 IMPDH IMPDH: The catal 26.4 3.4E+02 0.0073 28.2 8.8 77 265-342 136-224 (325)
489 PRK11337 DNA-binding transcrip 26.4 5.4E+02 0.012 25.8 10.2 44 297-344 195-238 (292)
490 TIGR01303 IMP_DH_rel_1 IMP deh 26.2 4.5E+02 0.0097 29.0 10.1 112 230-342 228-355 (475)
491 COG1105 FruK Fructose-1-phosph 26.0 1.9E+02 0.0041 30.0 6.7 37 288-325 131-168 (310)
492 PF03652 UPF0081: Uncharacteri 25.9 1.1E+02 0.0023 27.6 4.4 56 273-328 38-100 (135)
493 PF09419 PGP_phosphatase: Mito 25.7 2.3E+02 0.005 26.6 6.7 59 260-321 36-111 (168)
494 cd01121 Sms Sms (bacterial rad 25.4 4.8E+02 0.01 27.7 9.9 85 235-321 106-205 (372)
495 PRK13125 trpA tryptophan synth 25.4 3.9E+02 0.0084 26.3 8.7 99 240-341 103-211 (244)
496 KOG1663 O-methyltransferase [S 25.2 3.4E+02 0.0073 27.0 7.9 105 214-324 73-184 (237)
497 PF04309 G3P_antiterm: Glycero 25.2 37 0.0008 32.1 1.3 82 274-372 8-89 (175)
498 PRK11823 DNA repair protein Ra 25.1 4E+02 0.0087 29.0 9.4 84 236-321 105-203 (446)
499 cd06219 DHOD_e_trans_like1 FAD 25.0 4.8E+02 0.01 25.5 9.3 96 215-319 97-206 (248)
500 cd01393 recA_like RecA is a b 25.0 5.4E+02 0.012 24.4 9.6 55 267-321 88-164 (226)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=9.5e-80 Score=639.29 Aligned_cols=377 Identities=43% Similarity=0.709 Sum_probs=353.9
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
++.|+++|.|+..+ ..++++++|||++|||.|++.++..+.+.++..+|.|+|.||||+. |+++++.|
T Consensus 7 ~~~T~~v~~g~~~~--~~~gav~~PI~~tStf~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~~~af 84 (396)
T COG0626 7 SLTTRLVHAGRRPD--DLTGAVNPPIYLTSTFVFDSAGEGLDAFAGEEGGYDYSRTGNPTRDALEEALAELEGGEDAFAF 84 (396)
T ss_pred ccceeeEEcccccc--cCCCcccCCeeeeeeecccChhhhhhhccccccCcccccCCCccHHHHHHHHHHhhCCCcEEEe
Confidence 57899999997653 4589999999999999999998877766667788999999999998 89999999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+|||+||.+++.+++++||+|++++..|++++.++...++++|+++.++|..+.+++++++.+.+||+||+|+|+||++.
T Consensus 85 sSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~ 164 (396)
T COG0626 85 SSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLE 164 (396)
T ss_pred cCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999988888888887424999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChH-HHHHHHHHhh-hcCC
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHH-VLGG 379 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~-li~~l~~~~~-~~G~ 379 (531)
+.||++|+++||++|+++||||||++|+.++|+++|+|||++|+|||++||+|+++|+++++++ +.+.+....+ .+|.
T Consensus 165 v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~ 244 (396)
T COG0626 165 VPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGA 244 (396)
T ss_pred cccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999999999999999999999999999998887654 5555555555 5999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHH
Q 009604 380 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 459 (531)
Q Consensus 380 ~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~ 459 (531)
.++|+++|+++|+++||..||+++++|++++++||++||+|++|+||++++||+|++++||++|+|+|+||+++++ +++
T Consensus 245 ~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-~~~ 323 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-EAA 323 (396)
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-HHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987 889
Q ss_pred HHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 460 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 460 ~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
.+|+++|+++.+++||||++||+++|+.++|..++.+++.+.|+.+++||||||+||++|||+||++||+++
T Consensus 324 ~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 324 KKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALAKA 395 (396)
T ss_pred HHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864
No 2
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=6.5e-77 Score=624.34 Aligned_cols=373 Identities=46% Similarity=0.771 Sum_probs=332.4
Q ss_pred cccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeCC
Q 009604 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMAS 223 (531)
Q Consensus 154 ~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~sS 223 (531)
+|++||+|...++ ..+++++||||+|+||.|++.+++ +.+.++..+|.|+|+||||.. |++++++++|
T Consensus 1 ~T~~vh~g~~~~~-~~~~~v~~pi~~sstf~~~~~~~~-~~~~~~~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~S 78 (386)
T PF01053_consen 1 ETLLVHAGRDPDE-DQTGAVNPPIYQSSTFVFDSAEEL-DAFAGEEKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSS 78 (386)
T ss_dssp HHHHHHTTTTGGT-STTTBSS--B---SBBBBSSHHHH-HHHTTSSSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESS
T ss_pred CcceEeCCCCCCC-CCCCCeeCCccccccCcccchHHH-HhhcCCCCCcceeccccccHHHHHHHHHHhhcccceeeccc
Confidence 4889999987542 358999999999999999999998 878888888999999999987 8999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCccc
Q 009604 224 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 303 (531)
Q Consensus 224 G~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~ 303 (531)
||+||.+++.+++++||+|++++..|++++.+++..++++|+++.++|..|+++|++++++ +|++||+|+|+||++.+.
T Consensus 79 GmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~ 157 (386)
T PF01053_consen 79 GMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRP-NTKLVFLESPSNPTLEVP 157 (386)
T ss_dssp HHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCT-TEEEEEEESSBTTTTB--
T ss_pred hHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhccc-cceEEEEEcCCCcccccc
Confidence 9999999999999999999999999999999999889999999999999999999999998 499999999999999999
Q ss_pred CHHHHHHHHHhcC-CEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeCh--HHHHHHHHHhhhcCCC
Q 009604 304 DVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHVLGGA 380 (531)
Q Consensus 304 dl~~I~~la~~~g-i~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~--~li~~l~~~~~~~G~~ 380 (531)
|+++|+++||++| ++++||+||++|+.++|+.+|+|++++|+|||++||+|+++|+++.++ ++.++++.....+|..
T Consensus 158 Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~ 237 (386)
T PF01053_consen 158 DLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGAT 237 (386)
T ss_dssp -HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B
T ss_pred cHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCcc
Confidence 9999999999998 999999999999999999999999999999999999999999999765 7888899888999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHH
Q 009604 381 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 460 (531)
Q Consensus 381 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~ 460 (531)
++|+++|+++++++|+..|++++++|+++|+++|++||.|++|+||++++||+|+++++++.|+|+|++|+++++.+.+.
T Consensus 238 ~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~ 317 (386)
T PF01053_consen 238 LSPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAAR 317 (386)
T ss_dssp --HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHH
T ss_pred chHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987656899
Q ss_pred HHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 461 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 461 ~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
+|+++|+++.+++||||++||+++|+.++|..++++++.+.|+.+++||||||+||++|||+||++||+
T Consensus 318 ~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 318 RFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHHH
T ss_pred hHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999996
No 3
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-76 Score=590.89 Aligned_cols=376 Identities=38% Similarity=0.610 Sum_probs=354.6
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
+++|.++|+|+. + ..+++...|||+|++|.|++.++..+.|..+..+|.|+|.+|||.. |+-.++.+
T Consensus 7 ~f~T~~vHag~~-d--~~t~ara~PIyqtTsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~ 83 (426)
T COG2873 7 GFETLAVHAGQE-D--PTTGARAVPIYQTTSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAV 83 (426)
T ss_pred CcchhhhcCCCC-C--CCCCceecceeeeeeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhh
Confidence 589999999987 2 4589999999999999999999999999988889999999999998 88899999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+|||+|+.+++..++++||+||.+...|++++.++...++++|++++++|.+|+++++++|+++ ||+||+|+..||-+.
T Consensus 84 aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~n-Tkavf~EtigNP~~~ 162 (426)
T COG2873 84 ASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDEN-TKAVFAETIGNPGLD 162 (426)
T ss_pred ccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCcc-cceEEEEeccCCCcc
Confidence 9999999999999999999999999999999999988899999999999999999999999995 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeCh--HH-------------
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KL------------- 366 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~--~l------------- 366 (531)
+.|+++|+++||++|+++|||+|+++|+.++|+++|+|||++|+|||+||||..+||+|+-.. +|
T Consensus 163 v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~ 242 (426)
T COG2873 163 VLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPD 242 (426)
T ss_pred ccCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999997311 11
Q ss_pred --------HH---------HHH-HHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCC
Q 009604 367 --------VT---------QIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 428 (531)
Q Consensus 367 --------i~---------~l~-~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl 428 (531)
.+ +.+ ...+.+|.+++|+++|+++.|++||.+||+++++|+.++++||++||+|.+|+||+|
T Consensus 243 p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL 322 (426)
T COG2873 243 PSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGL 322 (426)
T ss_pred ccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCC
Confidence 11 111 345678999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhhhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009604 429 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 507 (531)
Q Consensus 429 ~s~p~~~l~~~~~-~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~l 507 (531)
++||+|++++|++ +|+|++++|+++++.+...+|+++|+++....++|++.||+.||++++|+.++++++.++|+.+++
T Consensus 323 ~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~ 402 (426)
T COG2873 323 ASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDL 402 (426)
T ss_pred CCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCc
Confidence 9999999999999 799999999999988999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHHhC
Q 009604 508 VRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 508 IRlSvGlE~~edli~dL~~AL~~i 531 (531)
||+|||+||.+|+|+||+|||+++
T Consensus 403 IRlSVGIEd~~DiiaDl~qAl~~~ 426 (426)
T COG2873 403 IRLSVGIEDIDDIIADLEQALEAA 426 (426)
T ss_pred EEEEeccCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999864
No 4
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.1e-72 Score=593.55 Aligned_cols=373 Identities=26% Similarity=0.453 Sum_probs=341.3
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhcc-CCCccCCCCCCCCC----------CCCcEEE
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTV----------GAESTVI 220 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~-~~~~Y~R~gnPt~~----------g~e~~i~ 220 (531)
+++|.++|.|... ....++++||||+|+||.|++.+++.+.+.++. .+|.|+|.||||.. |++.+++
T Consensus 5 ~~~t~~~~~~~~~--~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~~~~~~~YsR~~nPt~~~le~~la~LEg~~~a~~ 82 (395)
T PRK08114 5 KLDTQLVNAGRSK--KYTQGSVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGCAL 82 (395)
T ss_pred CcchheEeCCCCC--CCCCCCccCCeeCCCceecCCHHHHHHhhccCcCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Confidence 3678999998532 223489999999999999999998887775543 46999999999998 8999999
Q ss_pred eCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCC
Q 009604 221 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 300 (531)
Q Consensus 221 ~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG 300 (531)
|+|||+||.+++.+++++||+||++...|++++.+++..++++|+++.+++..|.++++++|+++ ||+|++|+|+||+|
T Consensus 83 ~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~~-TrlV~~EtpsNp~~ 161 (395)
T PRK08114 83 YPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQPN-TKVVFLESPGSITM 161 (395)
T ss_pred EhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCC
Confidence 99999999999999999999999999999999999988889999999999999999999999884 99999999999999
Q ss_pred cccCHHHHHHHHHhcC--CEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcC
Q 009604 301 RCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG 378 (531)
Q Consensus 301 ~v~dl~~I~~la~~~g--i~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G 378 (531)
.+.|+++|+++||++| ++++||+||++++.++|+++|+|++++|+|||++||+|+++|+++.++++++.++......|
T Consensus 162 ~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G 241 (395)
T PRK08114 162 EVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMG 241 (395)
T ss_pred EeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhcc
Confidence 9999999999999984 99999999999999999999999999999999999999999999888888788887788899
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC--CH
Q 009604 379 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DL 456 (531)
Q Consensus 379 ~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g--~~ 456 (531)
..++|+++|+++|+|+||..||+++++|+..+++||++||.|++|+||++++||+|+++++||+|+|+|++|++++ +.
T Consensus 242 ~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~ 321 (395)
T PRK08114 242 QMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTD 321 (395)
T ss_pred CCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 46
Q ss_pred HHHHHHHHHcCCCCcccccCCcccccc--cCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 457 TATIKFIDALKIPYIAPSFGGCESIVD--QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 457 ~~~~~fl~~L~~~~iavS~Gg~~Sli~--~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
+.+.+|+++|+++.+++||||++||++ +|..++|.. +++ ..++.+++||||||+||+||||+||+|||+++
T Consensus 322 ~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~-~~~---~~~~~~~liRlSvGlEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 322 EQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIR-PAG---EVDFTGTLIRLHIGLEDVDDLIADLAAGFARI 394 (395)
T ss_pred HHHHHHHHhCCcceeecccCCccceeccCCchhhhccC-Chh---HhcCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 789999999999999999999999999 555555544 333 35677799999999999999999999999864
No 5
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2e-71 Score=585.27 Aligned_cols=369 Identities=31% Similarity=0.526 Sum_probs=343.1
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
+++|.++|.|...+ ..+++++||||+|+||.|++.. +..+|.|+|++||+.. |++.++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~--------~~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivvt 74 (388)
T PRK08861 5 KPATIAVRTGIESD--SQYHAVVPPIYLSTNYGFPAFG--------EVPKYDYTRSGNPNRGLLEQTLSELESGKGAVVT 74 (388)
T ss_pred CcccceeECCCCCC--CCCCCccCCcccCcceEeCCcC--------ccCCccccCCCCchHHHHHHHHHHHhCCCeEEEE
Confidence 46799999996543 2368999999999999999742 2347999999999987 88999999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+||++|+.+++.+++++||+|+++.+.|++++.++...+...|+++.++|..|++++++++++ +|++|++|+|+||+|.
T Consensus 75 ~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~-~tklV~lesP~NPtG~ 153 (388)
T PRK08861 75 NCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAK-KPKLILLETPSNPLVR 153 (388)
T ss_pred CCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999888776666777999999998899999999987 4999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHHHhhhcCCC
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 380 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~~~G~~ 380 (531)
++|+++|.++|+++|+++|+|++|+.++.++++++|+|++++|+|||++||+++++|+++++ +++.++++.++...|..
T Consensus 154 v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~ 233 (388)
T PRK08861 154 VVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGAT 233 (388)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999988889999999999999999999999999999875 56778888888889999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHH
Q 009604 381 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 460 (531)
Q Consensus 381 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~ 460 (531)
++|+++|+++++|+||..||+++++|+.++++||++||.|.+|+||++++||+|+++++||.|+|+|++|+++++.+.+.
T Consensus 234 ~~p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~ 313 (388)
T PRK08861 234 GTPFDSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLK 313 (388)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987678899
Q ss_pred HHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 461 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 461 ~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
+|+++|+++.+++||||++||+++|+.++|+.++++++...|+.+++||||||+||.||||+||++||+++
T Consensus 314 ~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~~~dli~Dl~~al~~~ 384 (388)
T PRK08861 314 VFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLEDAQDLIADLDQAFAKA 384 (388)
T ss_pred HHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999853
No 6
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-72 Score=573.51 Aligned_cols=378 Identities=43% Similarity=0.656 Sum_probs=350.7
Q ss_pred cCCCccccccccCCcCCCCCCCCcccCCcccCCCcccCCH-HHHHHHHhhccCCCccCCCCCCCCC----------CCCc
Q 009604 149 FLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKT-AELIDFKEKRRASFEYGRYGNPTTV----------GAES 217 (531)
Q Consensus 149 ~~~~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~-~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~ 217 (531)
+...++|.++|+|+.++.. ..++|+||||.+.++.|+.. .+..... ...+|.|+|.||||+. |+++
T Consensus 18 ~~~~~~t~~~~~g~~~~~~-~~~~v~~pI~~~~s~tfk~~~~~~~~~~--~~~~~~Ysr~~nPt~~~le~~iaal~ga~~ 94 (409)
T KOG0053|consen 18 RLSHLDTNLLHAGQDPEKA-IHNAVAPPIYATLSTTFKQDLNEGEHGG--NLDGYDYSRSGNPTRDVLESGIAALEGAAH 94 (409)
T ss_pred hccccchhhhhcccccchh-ccccccCceecccceeecccCccccccc--cccccccccCCCCchHHHHHHHHHHhCCce
Confidence 3356899999999876543 47899999997777777765 2222111 1125999999999998 8899
Q ss_pred EEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCC
Q 009604 218 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 297 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~N 297 (531)
+++|+|||+|+..++..++++|++|++....|++|+.+++..++++|++..++|.++++++++++++ +|++||+|+|+|
T Consensus 95 ~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~-~t~~V~~ESPsN 173 (409)
T KOG0053|consen 95 ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKE-NTKAVFLESPSN 173 (409)
T ss_pred EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhcc-CceEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 499999999999
Q ss_pred CCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHHHhhh
Q 009604 298 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHV 376 (531)
Q Consensus 298 PtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~~ 376 (531)
|++.+.||++|+++||++|++||||+||++++.++|+.+|||||++|+|||++||+|+++|.++.+ +++..+++..+..
T Consensus 174 Pll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~ 253 (409)
T KOG0053|consen 174 PLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQED 253 (409)
T ss_pred CccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999997 8899999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCH
Q 009604 377 LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL 456 (531)
Q Consensus 377 ~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~ 456 (531)
.|.+++|+.+|++.|+++|+..|++++.+|+..++++|+++|.+++|+||+|++||+|++++++++|.+|.++|.+.+..
T Consensus 254 lg~~~~p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~ 333 (409)
T KOG0053|consen 254 LGWCEDPFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNE 333 (409)
T ss_pred hcCCCCHHHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999877776888888888
Q ss_pred HHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 457 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 457 ~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
+.+.+|+++|+++..++|+|+++||+++|+.|+|+. +.+++.+.|+++++||+|||+||.+|||.||.|||+++
T Consensus 334 ~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~mth~~-~~e~~~~~Gi~~~LVRvSVGiEd~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 334 EHAKKFYDALKLFTKAPSLGGNESLAEPPAIMTHAS-ELEEREKFGIDPNLVRVSVGIEDIEDLIKDFQQALEKA 407 (409)
T ss_pred HHHHHHHHhhhhhhcccCcCccchhhcchhhhccCC-CHHHHHhcCCCCCcEEEEeccCCHHHHHHHHHHHHHhh
Confidence 899999999999999999999999999999999999 99999999999999999999999999999999999863
No 7
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=5.1e-71 Score=587.07 Aligned_cols=373 Identities=29% Similarity=0.509 Sum_probs=343.6
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|.++|.|... .. +++++||||+++||.|++.+++.+.++....+|.|+|+|||+.. |++++++++
T Consensus 7 ~~t~~~~~g~~~--~~-~~~~~~PI~~sst~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~av~~~ 83 (432)
T PRK06702 7 KGTICVQGGYTP--KN-GEPRVLPLYQSTTYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGAVATA 83 (432)
T ss_pred cchHheeCCCCC--CC-CCCccCCccCCcceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcEEEEC
Confidence 679999998633 22 68999999999999999998887766655567999999999988 889999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
|||+||.+++.+++++||+||++.+.|++++.++...++.+|+++.++|. .|+++++++|+++ ||+|++|+|+||++.
T Consensus 84 SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~~-Tk~I~~e~pgnP~~~ 162 (432)
T PRK06702 84 SGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALANDK-TKLVYAESLGNPAMN 162 (432)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCcC-CeEEEEEcCCCcccc
Confidence 99999999999999999999999999999999887777889999999998 4899999999984 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChH----------H-----
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK----------L----- 366 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~----------l----- 366 (531)
+.|+++|+++|+++|+++|+|+||++|+.++|+++|+||+++|+|||++||+++++|+++.... +
T Consensus 163 v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~ 242 (432)
T PRK06702 163 VLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDP 242 (432)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999874221 1
Q ss_pred ----------------HHHHH-HHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCC
Q 009604 367 ----------------VTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 429 (531)
Q Consensus 367 ----------------i~~l~-~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~ 429 (531)
+.+.+ ...+.+|.+++|+++|+++++|++++.|++++++|+.+|+++|++||.|.+|+||+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~ 322 (432)
T PRK06702 243 SYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLD 322 (432)
T ss_pred cccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 11122 3455778999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009604 430 SHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 508 (531)
Q Consensus 430 s~p~~~l~~~~~-~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lI 508 (531)
+||+|+++++|| .|+|+|++|+++++.+.+.+|+++|+++.+++||||++||+.||++++|..++++++...||++++|
T Consensus 323 ~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~li 402 (432)
T PRK06702 323 SNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLI 402 (432)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeE
Confidence 999999999999 7899999999987778889999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHH
Q 009604 509 RFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 509 RlSvGlE~~edli~dL~~AL~ 529 (531)
|||||+||+||||+||+|||+
T Consensus 403 RlSvGlEd~eDLi~Dl~~Al~ 423 (432)
T PRK06702 403 RLSVGIEDVSDIIADLEAALV 423 (432)
T ss_pred EEEeccCCHHHHHHHHHHHHh
Confidence 999999999999999999996
No 8
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.8e-70 Score=577.94 Aligned_cols=371 Identities=29% Similarity=0.527 Sum_probs=339.0
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhcc-CCCccCCCCCCCCC----------CCCcEEEe
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~-~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
++|.++|.|... ....++++||||+|+||.|++.+++.+.+.+.. .+|.|+|.+||+.. ++++++++
T Consensus 5 ~~t~~~~~~~~~--~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~~ 82 (394)
T PRK09028 5 KATKIVSAGRDK--KWTKGVINPPVFRASTVVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTALY 82 (394)
T ss_pred ccceeEEcCCCC--CCCCCCccCCeeCCCCcccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 678999998433 223489999999999999999988776654432 45889999999865 77899999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+|||+||.+++.+++++||+||++++.|++++.++...++++|+++.+++..+.++++++++++ ||+|++|+|+||+|.
T Consensus 83 ~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~~-TklV~lespsNPtg~ 161 (394)
T PRK09028 83 PSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRPN-TKVLFLESPGSITME 161 (394)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCCc
Confidence 9999999999999999999999999999999988877788899999999988889999999874 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCc
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~ 381 (531)
+.|+++|+++||++|+++++|++|++++.++|+++|+|++++|+|||++||+|+++|+++.+++++++++..+...|.++
T Consensus 162 v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~ 241 (394)
T PRK09028 162 VQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCT 241 (394)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999888888888887788889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc-CCHHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD-GDLTATI 460 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~-g~~~~~~ 460 (531)
+|+++|+++|+|+||..||+++++|+.++++||++||+|.+|+||++++||+|+++++||+|+|+|++|+++ ++.+.+.
T Consensus 242 ~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~ 321 (394)
T PRK09028 242 SPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVT 321 (394)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 4567789
Q ss_pred HHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 461 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 461 ~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+|+++|+++.+++||||++||+++|++++|... ..+.|+.+++||||||+||+||||+||++||++
T Consensus 322 ~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~----~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~~ 387 (394)
T PRK09028 322 ALVEGMQHFKMGFSWGGFESLILGVFGINKLRT----ATNWDFSKPLIRLHIGLEDVDDLIADLEAGFER 387 (394)
T ss_pred HHHHhCCcceEecccCCCcceeECCCCcCccCc----hhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999988876533 234778889999999999999999999999974
No 9
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=5.4e-70 Score=573.62 Aligned_cols=366 Identities=32% Similarity=0.550 Sum_probs=334.9
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
.++|.++|.|.... ..+++++||||+|+||.|++.+++.+ ...+|.|+|.||||+. ++++++++
T Consensus 12 ~~~t~~~~~~~~~~--~~~~~~~~Pi~~sst~~~~~~~~~~~----~~~~y~YsR~gnPt~~~Le~~la~le~~~~~v~~ 85 (395)
T PRK05967 12 GINTRLAHDGNDPG--DYHGFVNPPVVHASTVLFPDAETMAT----RGQKYTYGTRGTPTTDALCKAIDALEGSAGTILV 85 (395)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCChHHhhc----ccCCCccCCCCChHHHHHHHHHHHHhCCCCEEEE
Confidence 36799999985432 23689999999999999999887643 2357999999999976 78899999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+|||+|+.+++.+++++||+||++++.|++++.++...++++|+++.+++..+.++++++++++ ||+|++|+|+||++.
T Consensus 86 sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~~-TklV~lesPsNP~l~ 164 (395)
T PRK05967 86 PSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRPN-TKVVHTEAPGSNTFE 164 (395)
T ss_pred CcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCcC-ceEEEEECCCCCCCc
Confidence 9999999999999999999999999999999988877889999999999988888999999885 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCc
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~ 381 (531)
+.|+++|+++||++|+++++|++|++++.++|+++|+|++++|+|||++||+|+++|+++.+++.+++++......|..+
T Consensus 165 v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~ 244 (395)
T PRK05967 165 MQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCA 244 (395)
T ss_pred HHHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999888888888887777889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC----HH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LT 457 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~----~~ 457 (531)
+|+++|+++++++||..||+++++|+..|++||++||+|.+|+||++++||+|+++++||.|+|+|++|+++++ .+
T Consensus 245 ~p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~ 324 (395)
T PRK05967 245 GPDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKA 324 (395)
T ss_pred CHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999843 67
Q ss_pred HHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 458 ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 458 ~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.+.+|+++|+++.+++||||++||++|+ .+ +.+.+...|+.+++||||||+||++|||+||++||++
T Consensus 325 ~~~~f~~~l~l~~~~~slG~~~sLi~~~-~~-----~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~~ 391 (395)
T PRK05967 325 KAHAFLDALEIFGLGYSWGGYESLALHV-KL-----GDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFAA 391 (395)
T ss_pred HHHHHHHhCCcceEccCCCCcceeeeeC-CC-----ChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 8899999999999999999999999874 33 3344444688889999999999999999999999985
No 10
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.1e-69 Score=572.83 Aligned_cols=376 Identities=40% Similarity=0.659 Sum_probs=351.6
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
++.|+++|+|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|++||+.. |+++++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~ 85 (398)
T PRK08249 8 GVGTKAVWAGEKEY--LPYGATQVPVVLSVAYGYDDIDEWYDVALGKKPGHIYSRNTNPTVQAFEEKVRILEGAEAATAF 85 (398)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCHHHHHHhhcCCcCCccccCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 36799999996432 2368999999999999999998777766555567999999999987 88999999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+||++|+.+++.+++++||+|+++.+.|+++..++...++..|+++.++|..|+++++++++++ |++|++|+|+||+|.
T Consensus 86 ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~~-tklV~ie~p~NPtg~ 164 (398)
T PRK08249 86 STGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAKG-CDLLYLETPTNPTLK 164 (398)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999999888877788889999999999999999999884 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCc
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~ 381 (531)
+.|+++|.++|+++|++||+|++|+.++...++.+++|++++|+||+++||+++++|+++++++++++++..+...|..+
T Consensus 165 v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~ 244 (398)
T PRK08249 165 IVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATM 244 (398)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998887777888999999999999999999999999999999999988888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 461 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~ 461 (531)
+++.+|+++++++++..|++++++|++.++++|++||.|.+|+||++++||+|+++++||.|+|+|++|+++++.+.+.+
T Consensus 245 s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~ 324 (398)
T PRK08249 245 DPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKR 324 (398)
T ss_pred CHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778899
Q ss_pred HHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 462 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 462 fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
|+++|+++.+++||||++||+++|..++|..++++++...|+.+++||||||+||++|||+||++||+.
T Consensus 325 f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 393 (398)
T PRK08249 325 LLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFAH 393 (398)
T ss_pred HHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999975
No 11
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=6.5e-69 Score=573.69 Aligned_cols=376 Identities=35% Similarity=0.580 Sum_probs=345.3
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||+.. |++++++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~leg~~~al~~~ 86 (431)
T PRK08248 9 LETLAIHAGQEID--PTTGSRAVPIYQTTSYGFRDSEHAANLFSLKEFGNIYTRIMNPTTDVFEKRIAALEGGIGALAVS 86 (431)
T ss_pred cchhheeCCcCCC--CCCCCccCCeeCCCccccCCHHHHHhhhccccCCceeECCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 5789999985432 2368999999999999999999888777655567999999999987 889999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+..++.+++++||+|+++.+.|++++..+...++.+|+++.++|..|+++++++++++ +++|++++|+||+|.+
T Consensus 87 sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~~-tklV~l~sp~NPtG~v 165 (431)
T PRK08248 87 SGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITDK-TKALFAETIGNPKGDV 165 (431)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCCcc
Confidence 999999999999999999999999999999988877788899999999999999999999884 9999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHH----------------
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------- 366 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l---------------- 366 (531)
.|+++|.++||++|+++|+|++++.+..+.++++|+|++++|+||+++|||+++||+++.+.+.
T Consensus 166 ~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~ 245 (431)
T PRK08248 166 LDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDP 245 (431)
T ss_pred cCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCcc
Confidence 9999999999999999999999998888888899999999999999999999999998864321
Q ss_pred -----------------HHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCC
Q 009604 367 -----------------VTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 429 (531)
Q Consensus 367 -----------------i~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~ 429 (531)
....+......|..++|++||+++++|+||..|++++++|+.+|+++|++||+|++|+||+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~ 325 (431)
T PRK08248 246 SYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLP 325 (431)
T ss_pred ccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 112223556789999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009604 430 SHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 508 (531)
Q Consensus 430 s~p~~~l~~~~~-~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lI 508 (531)
+||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++.+++||||++||++||++++|..++++++.++|+++++|
T Consensus 326 s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~li 405 (431)
T PRK08248 326 SHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLV 405 (431)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeE
Confidence 999999999999 6899999999987777899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHHhC
Q 009604 509 RFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 509 RlSvGlE~~edli~dL~~AL~~i 531 (531)
|||||+||.+|||+||+|||+++
T Consensus 406 RlsvGlEd~~dL~~Dl~~Al~~~ 428 (431)
T PRK08248 406 RLSVGTEAIDDILDDLRQAIRQS 428 (431)
T ss_pred EEEeccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999853
No 12
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.6e-68 Score=570.54 Aligned_cols=376 Identities=32% Similarity=0.474 Sum_probs=342.8
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||+.. |++++++|+
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~le~~la~l~g~~~~v~fs 91 (437)
T PRK05613 14 FETRSIHAGQSVD--SDTSARNLPIYQTTSYVFDSAEHAKQRFALEDLGPIYSRLTNPTVEALENRIASLEGGVHAVAFA 91 (437)
T ss_pred cchHheeCCCCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCceeeCccChHHHHHHHHHHHHhCCCeEEEeC
Confidence 5789999995532 2368999999999999999998877766555567999999999987 788999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-CCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
|||+|+.+++.+++++||+||++..+|+++...+...++++|+++.++| ..|+++++++++++ |++|++++++||+|.
T Consensus 92 SG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~-tk~V~~e~~~Np~~~ 170 (437)
T PRK05613 92 SGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPN-TKAFFGETFANPQAD 170 (437)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCcc-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999998777777888999999997 56899999999885 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHH---------------
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL--------------- 366 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l--------------- 366 (531)
+.|+++|+++|+++|+++|+|++++.+..++++.+|+|++++|+||+++|||+.+||+++.+.++
T Consensus 171 v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~ 250 (437)
T PRK05613 171 VLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYF 250 (437)
T ss_pred ccCHHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCC
Confidence 99999999999999999999999998888899999999999999999999999999999864220
Q ss_pred --------------------H-HHHHHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 367 --------------------V-TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 367 --------------------i-~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
. +........+|..++|+++|+++++|+||..|++++++|+.+|+++|++||+|.+|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~y 330 (437)
T PRK05613 251 VTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNF 330 (437)
T ss_pred CCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEEC
Confidence 0 1122455678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhhhhhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCC
Q 009604 426 PGLKSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM 504 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~-~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~ 504 (531)
|++++||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++++++|||+++||++||++++|..++++++..+|++
T Consensus 331 Pgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~ 410 (437)
T PRK05613 331 AGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGIT 410 (437)
T ss_pred CCCCCCccHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCC
Confidence 9999999999999997 789999999998777889999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 505 DNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 505 ~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
+++||||||+||++|||+||+|||+++
T Consensus 411 ~~liRlsvGlE~~~dLi~Dl~~Al~~~ 437 (437)
T PRK05613 411 QATVRLSVGIEDIDDIIADLEGGFAAI 437 (437)
T ss_pred CCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999864
No 13
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.6e-68 Score=568.76 Aligned_cols=375 Identities=34% Similarity=0.550 Sum_probs=343.0
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|.++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||+.. |++.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~av~~s 91 (436)
T PRK07812 14 FETKQIHAGQTPD--PATNARALPIYQTTSYTFDDTDHAAALFGLAEPGNIYTRIMNPTQDVVEQRIAALEGGVAALLLA 91 (436)
T ss_pred cchhheeCCCCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhcCCcCCccccCCCCchHHHHHHHHHHHhCCCeEEEEc
Confidence 6788999985432 2368999999999999999998887766655567899999999987 889999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-CCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
|||+|+.+++.+++++||+||++...|++++.++...+++.|+++.+++ ..|+++++++++++ |++|++|+|+||+|.
T Consensus 92 SG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~~-tklV~ie~~sNp~G~ 170 (436)
T PRK07812 92 SGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRPN-TKAFFAETISNPQID 170 (436)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCCC-CeEEEEECCCCCCCe
Confidence 9999999999999999999999999999999888777788999999995 67899999999874 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChH----------------
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 365 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~---------------- 365 (531)
+.|+++|.++||++|+++|||++++.++.++++.+|+|++++|+||+++|||++++|+++.+..
T Consensus 171 v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~ 250 (436)
T PRK07812 171 VLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDP 250 (436)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCc
Confidence 9999999999999999999999999998889999999999999999999999999999886331
Q ss_pred --------------HHHHHH-HHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCC
Q 009604 366 --------------LVTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 430 (531)
Q Consensus 366 --------------li~~l~-~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s 430 (531)
++.+++ ......|..++|+++|+++++|+||..|++++++|+.+|+++|++||+|.+|+||++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s 330 (436)
T PRK07812 251 SYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPS 330 (436)
T ss_pred ccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 111222 34567899999999999999999999999999999999999999999999999999999
Q ss_pred Cchhhhhhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEE
Q 009604 431 HPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 509 (531)
Q Consensus 431 ~p~~~l~~~~~-~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIR 509 (531)
||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++++++|||+++||+++|..++|..++++++..+|+++++||
T Consensus 331 ~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liR 410 (436)
T PRK07812 331 SPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVR 410 (436)
T ss_pred CccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 99999999999 88999999999877778999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHHh
Q 009604 510 FSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 510 lSvGlE~~edli~dL~~AL~~ 530 (531)
||||+||.||||+||+|||++
T Consensus 411 lSvGlEd~~dli~dl~~Al~~ 431 (436)
T PRK07812 411 LAVGIEGIDDILADLEAGFAA 431 (436)
T ss_pred EEeccCCHHHHHHHHHHHHHh
Confidence 999999999999999999985
No 14
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=3.6e-68 Score=561.26 Aligned_cols=370 Identities=33% Similarity=0.549 Sum_probs=341.9
Q ss_pred CCccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEE
Q 009604 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVI 220 (531)
Q Consensus 151 ~~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~ 220 (531)
+.++|.++|.|.... ..+++++||||+++||.|++.++ ..+|.|+|++||+.. |++++++
T Consensus 3 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~--------~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~ 72 (386)
T PRK08045 3 RKQATIAVRSGLNDD--EQYGCVVPPIHLSSTYNFTGFNE--------PRAHDYSRRGNPTRDVVQRALAELEGGAGAVL 72 (386)
T ss_pred CCcccceeEcCCCCC--CCCCCccCCccCCcceecCCccc--------cCCceeeCCCCccHHHHHHHHHHHhCCCeEEE
Confidence 357899999985432 23689999999999999988542 246999999999987 7788999
Q ss_pred eCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCC
Q 009604 221 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 300 (531)
Q Consensus 221 ~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG 300 (531)
++||++|+.+++.+++++||+|+++.+.|++++..+...+...++++.+++..|++++++++++ +|++|++|+|+||||
T Consensus 73 ~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~-~tklV~l~sP~NPtG 151 (386)
T PRK08045 73 TNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAE-KPKLVLVESPSNPLL 151 (386)
T ss_pred ECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhccc-CCeEEEEECCCCCCC
Confidence 9999999999999999999999999999999888887666777888888888899999999987 499999999999999
Q ss_pred cccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEe-ChHHHHHHHHHhhhcCC
Q 009604 301 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG 379 (531)
Q Consensus 301 ~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~-~~~li~~l~~~~~~~G~ 379 (531)
.+.|+++|.++|+++|++||+|++|+.+..+.++.+|+|++++|+|||++|++++++|+++. +++++++++......|.
T Consensus 152 ~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~ 231 (386)
T PRK08045 152 RVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGV 231 (386)
T ss_pred EecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999988888899999999999999999999999999877 56788888888888899
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHH
Q 009604 380 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 459 (531)
Q Consensus 380 ~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~ 459 (531)
+++++++|+++++|+++..|++++++|++.|+++|++||.|.+|+||++++||+|+++++||.|+|+|++|+++++.+.+
T Consensus 232 ~~~p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~ 311 (386)
T PRK08045 232 TGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTL 311 (386)
T ss_pred CCCHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777778
Q ss_pred HHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 460 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 460 ~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
.+|+++|+++.+++||||++||+++|++++|+.++++++.+.|+++++||||||+||++|||+||+|||+++
T Consensus 312 ~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 383 (386)
T PRK08045 312 RRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_pred HHHHHhccceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999863
No 15
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=7.3e-68 Score=560.20 Aligned_cols=376 Identities=37% Similarity=0.628 Sum_probs=348.7
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|.++|.|.... ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||+.. |.+.+++++
T Consensus 4 ~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~~~ 81 (391)
T TIGR01328 4 FATRAIHAGYPPK--DQFGALTPPIYQTSTFVFDSCEQGGNRFAGQESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVATS 81 (391)
T ss_pred cccceeeCCccCC--CCCCCccCCcccCcceecCChHHHHHhhcCCcCCCceeCCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 5789999995432 2368999999999999999998888777666668999999999966 889999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
||++|+.+++.+++++||+|+++.+.|++++..+...+..+|+++.++|..|+++++++++++ |++|++|+|+||+|.+
T Consensus 82 sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~~-tklV~le~p~Np~G~v 160 (391)
T TIGR01328 82 SGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKDN-TKIVYFETPANPTMKL 160 (391)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhccC-CeEEEEECCCCCCCcc
Confidence 999999999999999999999999999999888877788899999999999999999999874 9999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh--hhcCCC
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA 380 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~--~~~G~~ 380 (531)
.|+++|.++|+++|+++|+|++|+.++...++..|+|++++|+||++++++++++|+++++++++++++... ...|..
T Consensus 161 ~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~ 240 (391)
T TIGR01328 161 IDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSV 240 (391)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999888788888899999999999999999999999999999988887532 245778
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHH
Q 009604 381 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 460 (531)
Q Consensus 381 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~ 460 (531)
++++.+|+++++++++..|++++.+|++.++++|+++|.|.+|+||++++||+|+++++||+|+|+|++|+++++.+.+.
T Consensus 241 l~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~ 320 (391)
T TIGR01328 241 ISPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAK 320 (391)
T ss_pred CCcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987677899
Q ss_pred HHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 461 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 461 ~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
+|+++|+++.+++||||++||++||.+++|..++++++...|+.+++||||||+||++|||+||+|||+++
T Consensus 321 ~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 321 KLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGLEDADDLIADLKQALDAL 391 (391)
T ss_pred HHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999864
No 16
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1e-67 Score=563.84 Aligned_cols=375 Identities=35% Similarity=0.552 Sum_probs=341.8
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|.++|.|.... ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|++||+.. |.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~s 80 (425)
T PRK06084 3 LETLAIHAGYSPD--PTTKAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVA 80 (425)
T ss_pred cchhheeCCcCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCccccCCCCchHHHHHHHHHHHhCCCceeEeh
Confidence 5688999985432 2368999999999999999998888776655567999999999987 888999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+.+++.+++++||+|+++.+.|++++..+...++..|+++.+++..|+++|+++++++ |++|++|+|+||+|.+
T Consensus 81 sG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~~-tklV~lesp~NPtG~v 159 (425)
T PRK06084 81 SGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDER-TKAVFCESIGNPAGNI 159 (425)
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhccC-CcEEEEeCCCCCCCee
Confidence 999999999999999999999999999999888877777789999999999999999999874 9999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHH--H-------------
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL--V------------- 367 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l--i------------- 367 (531)
.|+++|.++|+++|++||+|++|+.++.++++.+|+|++++|+||+++||++++||+++.+... .
T Consensus 160 ~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~ 239 (425)
T PRK06084 160 IDIQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPD 239 (425)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCC
Confidence 9999999999999999999999999988889999999999999999999999999999864321 0
Q ss_pred -------------------HHHHHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCC
Q 009604 368 -------------------TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 428 (531)
Q Consensus 368 -------------------~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl 428 (531)
+........+|..+++++||+++++|++|..|++++++|+++|+++|++||+|.+|+||++
T Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l 319 (425)
T PRK06084 240 PSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGL 319 (425)
T ss_pred cccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 0011224467899999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhhhhhcCC-cccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009604 429 KSHPEHHIATQQMTG-FGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 507 (531)
Q Consensus 429 ~s~p~~~l~~~~~~g-~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~l 507 (531)
++||+|+++++++.| +|+|++|+++++.+.+.+|+++|+++++++||||++||+++|.+++|..++++++.+.|+++++
T Consensus 320 ~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~l 399 (425)
T PRK06084 320 PDHPEHELARRYMGGKPASILSFGIKGGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDM 399 (425)
T ss_pred CCcccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCe
Confidence 999999999999987 8999999998776778999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHHh
Q 009604 508 VRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 508 IRlSvGlE~~edli~dL~~AL~~ 530 (531)
||||||+||++|||+||+|||++
T Consensus 400 iR~svGlEd~~dLi~dl~~Al~~ 422 (425)
T PRK06084 400 VRLSIGIEHIDDIIADLAQALDA 422 (425)
T ss_pred EEEEeccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999985
No 17
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.2e-67 Score=563.88 Aligned_cols=376 Identities=33% Similarity=0.559 Sum_probs=342.8
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
+++|.++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||+.. |+++++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~y~R~~~p~~~~le~~lA~l~g~~~av~~ 85 (433)
T PRK08134 8 GFDTLALHAGAAPD--PATGARAVPIHLTTSFVFRDSDHAAALFNLERAGHVYSRISNPTVAVLEERVAALEGGVGAIAT 85 (433)
T ss_pred CcchhheeCCCCCC--CCCCCccCCccCCCccccCCHHHHHHhhcccccCceeecCcChHHHHHHHHHHHHhCCCcEEEe
Confidence 36799999985432 2368999999999999999999888776656678999999999987 88889999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+|||+||.+++.+++++||+||++..+|+++..++...++++|++++++|..|+++|+++|+++ ||+|++++|+||+|.
T Consensus 86 sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~~-TklV~~e~~~np~g~ 164 (433)
T PRK08134 86 ASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRPN-TRLLFGETLGNPGLE 164 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCcccCc
Confidence 9999999999999999999999999999999888776678899999999998999999999984 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChH----------------
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 365 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~---------------- 365 (531)
+.|+++|+++||++|+++|+|+++++++.+.++.+|+|++++|+||+++|+|+++||+++....
T Consensus 165 v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~ 244 (433)
T PRK08134 165 VLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPY 244 (433)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCc
Confidence 9999999999999999999999999998888999999999999999999999999998874211
Q ss_pred ----------------HHHHH-HHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCC
Q 009604 366 ----------------LVTQI-RNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 428 (531)
Q Consensus 366 ----------------li~~l-~~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl 428 (531)
+..+. ......+|..+++++||+++++|+++..|++++++|+.+++++|++||.|.+|+||++
T Consensus 245 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l 324 (433)
T PRK08134 245 AGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPEL 324 (433)
T ss_pred ccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 00011 1223567889999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhhhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009604 429 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 507 (531)
Q Consensus 429 ~s~p~~~l~~~~~-~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~l 507 (531)
++||+|++++++| .|+|+|++|+++++.+.+.+|+++|+++++++|||+++||+++|..++|..+++++++.+|+.+++
T Consensus 325 ~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~l 404 (433)
T PRK08134 325 ESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGT 404 (433)
T ss_pred CCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCe
Confidence 9999999999999 789999999998777788999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHHh
Q 009604 508 VRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 508 IRlSvGlE~~edli~dL~~AL~~ 530 (531)
||||||+||+||||+||+|||++
T Consensus 405 iRlsvGlE~~~dli~dl~~Al~~ 427 (433)
T PRK08134 405 IRLSIGLEDADDLIDDLKRALKA 427 (433)
T ss_pred EEEEeccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999985
No 18
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=2.1e-67 Score=558.46 Aligned_cols=372 Identities=36% Similarity=0.571 Sum_probs=346.6
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|+++|+|... ..+++++||||+++||.|++.+++.+.+.+...+|.|+|++||+.. |.+++++++
T Consensus 16 ~~t~~~~~~~~~---~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~al~~~ 92 (403)
T PRK07810 16 QATIGVRGGLLR---SGFEETAEALYLTSGYVYESAAAAEAAFTGELDRFVYSRYGNPTVSMFEERLRLIEGAEACFATA 92 (403)
T ss_pred cchhheeCCCCC---CCCCCccCCccCCCccccCCHHHHHHHhccCcCCcceeCCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 679999999543 2368899999999999999998877766555567899999999976 889999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+..++.+++++||+|+++...|++++..+...++.+|+++.++|..|+++++++++++ |++|++|+|+||+|.+
T Consensus 93 sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~-tklV~~esp~Nptg~v 171 (403)
T PRK07810 93 SGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSVP-TQAVFFETPSNPMQSL 171 (403)
T ss_pred ChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCCee
Confidence 999999999999999999999999999999988877788899999999999999999999884 9999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHH-HHHHHhhhcCCCc
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGAL 381 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~-~l~~~~~~~G~~~ 381 (531)
.|+++|+++|+++|++||+|++|+.++.++++.+|+|++++|+||+++|||+++||+++++++.+. .++.+....|..+
T Consensus 172 ~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~ 251 (403)
T PRK07810 172 VDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAL 251 (403)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999998888889999999999999999999999999999887664 5666667789999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC----CHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DLT 457 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g----~~~ 457 (531)
+++.+|+++++|+++..|++++.+|+.+++++|++||+|.+|+||++++||+|+++++||+|+|+|++|++++ +.+
T Consensus 252 s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~ 331 (403)
T PRK07810 252 SAFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKK 331 (403)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 467
Q ss_pred HHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009604 458 ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 528 (531)
Q Consensus 458 ~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL 528 (531)
.+.+|+++|+++++++|||+.+|++++|..++|..++.+.+.+.|+.+++||||||+|+++|||+||+|||
T Consensus 332 ~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGlE~~~dli~dl~~Al 402 (403)
T PRK07810 332 RAFEVLDKLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGLEDTDDLIADLDRAL 402 (403)
T ss_pred HHHHHHHhCCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999998
No 19
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=1.2e-66 Score=549.10 Aligned_cols=368 Identities=35% Similarity=0.592 Sum_probs=339.3
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
.++|+++|.|...+ ..+++++|||+++++|.|++.. ...+|.|+|++||+.. |+++++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~ 72 (382)
T TIGR02080 3 KQATIAVRSGLNSD--TQYGCVVPPIYLSTTYNFTGFN--------EPRAYDYSRSGNPTRDLLQQALAELEGGAGAVVT 72 (382)
T ss_pred CcccceeecCCCCC--CCCCCccCCeeCCceeEeCCcC--------ccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 46799999985432 2368999999999999987532 1236889999999987 78899999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+||++||.+++.+++++||+|+++.+.|++++..+..++...++++.+++..|+++++++++++ ||+|++|+|+||||.
T Consensus 73 ~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~~-tklV~l~~p~NPtG~ 151 (382)
T TIGR02080 73 NTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQK-PKLVLIETPSNPLLR 151 (382)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCCE
Confidence 9999999999999999999999999999998888776667778899998888999999999874 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 380 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~-~~~li~~l~~~~~~~G~~ 380 (531)
+.|+++|.++|+++|++||+|++|+.+..+.++.+|+|++++|+|||++|++++++|+++. +++++++++.++...|..
T Consensus 152 ~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~ 231 (382)
T TIGR02080 152 VVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVT 231 (382)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999887778888899999999999999999999999876 567888888888888999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHH
Q 009604 381 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 460 (531)
Q Consensus 381 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~ 460 (531)
++++++|+++++++++..|++++.+|+..+++||++||.|++|+||++++||+|+++++|+.|+|+|++|+++++.+.+.
T Consensus 232 ~sp~~a~l~lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~ 311 (382)
T TIGR02080 232 GGAFDSYLTLRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVR 311 (382)
T ss_pred CCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987667788
Q ss_pred HHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 461 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 461 ~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+|+++|+++++++||||++||+++|++++|..++++++..+|+.+++||||||+||++|||+||++||++
T Consensus 312 ~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 312 RFLGGLSLFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGLEDADDLIADLEQGLRA 381 (382)
T ss_pred HHHHcCCcceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975
No 20
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=2.2e-66 Score=548.93 Aligned_cols=374 Identities=36% Similarity=0.616 Sum_probs=348.2
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|.++|.|... +.++++.+|||++++|.|++.++....+.++..+|.|+|++||+.. |++++++++
T Consensus 7 ~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~v~~s 83 (390)
T PRK08133 7 FDTLAVRAGQLR---SPFGEHSEALFLTSSFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGAEACVATA 83 (390)
T ss_pred cchhheeCCCCC---CCCCCccCCccCCCCcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 578899998543 2367899999999999999988776655555557889999999987 888999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+.+++.+++++||+||++.+.|++++..+...++.+|+++.+++..|++++++++++ +||+|++|+|+||+|.+
T Consensus 84 sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~ie~p~NptG~v 162 (390)
T PRK08133 84 SGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRP-NTKLFFLETPSNPLTEL 162 (390)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCCc
Confidence 99999999999999999999999999999998887777888999999999999999999987 49999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCch
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN 382 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s 382 (531)
.|+++|.++|+++|+++|+|++|+.+....++.+|+|++++|+||+++|+|+++||++++++++++++.......|..++
T Consensus 163 ~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~ 242 (390)
T PRK08133 163 ADIAALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLS 242 (390)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999988888888889999999999999999999999999998888888877778898999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHH
Q 009604 383 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 462 (531)
Q Consensus 383 ~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~f 462 (531)
++.+|+++++++++..|++++.+|+..++++|+++|+|.+|+||+++++|+|+++++|+.|+|+|++|+++++.+.+.+|
T Consensus 243 ~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f 322 (390)
T PRK08133 243 PFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRV 322 (390)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777788999
Q ss_pred HHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 463 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 463 l~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+++|+++.+++||||++|++++|++++|..++++++..+|+++++||||||+||.||||+||+|||+.
T Consensus 323 ~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 390 (390)
T PRK08133 323 IDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGLEDVADIKADLARGLAA 390 (390)
T ss_pred HHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999973
No 21
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-66 Score=550.68 Aligned_cols=359 Identities=35% Similarity=0.604 Sum_probs=329.5
Q ss_pred CCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeCChHHHHHHHHHHhccC
Q 009604 169 VTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMASGMSASTVMLLALVPA 238 (531)
Q Consensus 169 ~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~sSG~~Ai~~al~all~p 238 (531)
.+++++||||+|+||.|++.+++.+.+.+...+|.|+|+|||+.. |++++++++|||+|+..++.+++++
T Consensus 6 ~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~ 85 (397)
T PRK05939 6 EHGAVHKPIHTSVTYGYEDARDLIDVFQGKKPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRA 85 (397)
T ss_pred CCCCccCCccCCCCeecCCHHHHHHhhcCCcCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCC
Confidence 368899999999999999998888777666567999999999887 8899999999999999999999999
Q ss_pred CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCE
Q 009604 239 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAI 318 (531)
Q Consensus 239 GD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~ 318 (531)
||+||++++.|+++..++. .++..|+++.+++..|+++|+++++++ |++|++++|+||+|.+.|+++|+++||++|++
T Consensus 86 Gd~Vv~~~~~y~~t~~~~~-~l~~~G~~v~~v~~~d~e~l~~~l~~~-tklV~vesp~NptG~v~dl~~I~~la~~~gi~ 163 (397)
T PRK05939 86 GDHLVSSQFLFGNTNSLFG-TLRGLGVEVTMVDATDVQNVAAAIRPN-TRMVFVETIANPGTQVADLAGIGALCRERGLL 163 (397)
T ss_pred CCEEEECCCccccHHHHHH-HHHhcCCEEEEECCCCHHHHHHhCCCC-CeEEEEECCCCCCCCHHhHHHHHHHHHHcCCE
Confidence 9999999999998877764 467789999999999999999999874 99999999999999999999999999999999
Q ss_pred EEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChH--------H-------------HHHHH-HHhhh
Q 009604 319 VCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------L-------------VTQIR-NLHHV 376 (531)
Q Consensus 319 lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~--------l-------------i~~l~-~~~~~ 376 (531)
+|+|++|+.+..+++..+|+|++++|+||+++|||++++|+++.+.. + +..++ .....
T Consensus 164 livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (397)
T PRK05939 164 YVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRD 243 (397)
T ss_pred EEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHh
Confidence 99999999888888888999999999999999999999998874321 1 11222 23356
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCH
Q 009604 377 LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL 456 (531)
Q Consensus 377 ~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~ 456 (531)
+|..++|+++|+++++++||..|++++.+|+.++++||++||+|.+|+||++++||+|+++++++.|+|+|++|+++++
T Consensus 244 ~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~- 322 (397)
T PRK05939 244 MGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG- 322 (397)
T ss_pred cCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH-
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred HHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 457 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 457 ~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+.+.+|+++|+++.+++||||++||++||+.++|..++++++..+|+++++||||||+||++|||+||+|||++
T Consensus 323 ~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlEd~~dLi~dl~~Al~~ 396 (397)
T PRK05939 323 IDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGIEDEADLIADFEQALDA 396 (397)
T ss_pred HHHHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHhc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999975
No 22
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.1e-66 Score=547.79 Aligned_cols=370 Identities=36% Similarity=0.581 Sum_probs=336.8
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
.+|.++|.|... +.+++++||||+|+||.|++.+. +.++..+|.|+|++||+.. |++++++++
T Consensus 3 ~~t~~~~~~~~~---~~~~~~~~pi~~~st~~~~~~~~----~~~~~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~ 75 (385)
T PRK08574 3 RGTDAVRGYRGS---DPYGSLQPPIYLTALFRQEGEAY----PSDRGFDLKYSREENPTLRPLEEALAKLEGGVDALAFN 75 (385)
T ss_pred ccceeeecCCCC---CCCCCccCCccCCcceecCcchh----hcCCcCCceEECCCCccHHHHHHHHHHHhCCCcEEEeC
Confidence 468889977432 23689999999999999887532 2233457999999999988 889999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+.+++.+++++||+|+++.+.|+++..+++. ++..|+++.+++. |++++++++++.+||+|++|+|+||+|.+
T Consensus 76 sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~-~~~~g~~v~~~~~-d~~~l~~~i~~~~tklV~ie~p~NPtG~v 153 (385)
T PRK08574 76 SGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKS-LEKFGVKVVLAYP-STEDIIEAIKEGRTKLVFIETMTNPTLKV 153 (385)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH-hhccCcEEEEECC-CHHHHHHhcCccCceEEEEECCCCCCCEe
Confidence 999999999999999999999999999998877754 4778999988765 68999999987349999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEE-eChHHHHHHHHHhhhcCCCc
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv-~~~~li~~l~~~~~~~G~~~ 381 (531)
+|+++|+++|+++|++||+|++|+.++..+++.+|+|++++|+||+++||++++||+++ .++++.++++.++..+|..+
T Consensus 154 ~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~ 233 (385)
T PRK08574 154 IDVPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIM 233 (385)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998888888899999999999999999999999555 46788888888888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcC--CcccEEEEEEcCCHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT--GFGGVVSFEVDGDLTAT 459 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~--g~g~ivsf~l~g~~~~~ 459 (531)
+++.+|+++++++++..|++++.+|+++++++|+++|.|.+|+||++++||+|+++++||+ |+|+|++|+++++.+.+
T Consensus 234 ~p~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~ 313 (385)
T PRK08574 234 QPFEAYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAV 313 (385)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999996 79999999998777889
Q ss_pred HHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 460 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 460 ~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
.+|+++|+++++++|||+++||+++|+.++|..+++++++..|+.+++||||||+||++|||+||+|||++|
T Consensus 314 ~~~~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 385 (385)
T PRK08574 314 LKFLRSLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGLEDVEDLIEDLDQALGSI 385 (385)
T ss_pred HHHHHcCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999875
No 23
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=3.4e-66 Score=548.72 Aligned_cols=375 Identities=35% Similarity=0.586 Sum_probs=346.2
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|+++|.|... ..++++.+|||++++|.|++.+++.+.+.+...+|.|+|++||+.. |.+.+++++
T Consensus 11 ~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~~~~~ 87 (398)
T PRK07504 11 PATRLVHSGTLR---SQFGETSEALFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDARATA 87 (398)
T ss_pred cccceeeCCCCC---CCCCCCcCCeECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCeeeEec
Confidence 578999998632 2367899999999999999988776666555667999999999987 888899999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
||++|+..++.+++++||+|+++.+.|+++...+...++.+|+++.+++..|+++++++++++ ||+|++|+|+||+|.+
T Consensus 88 sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~~-tklV~lesp~NptG~v 166 (398)
T PRK07504 88 SGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRPN-TKVFFLESPTNPTLEV 166 (398)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCcEe
Confidence 999999988888999999999999999998877766678889999999988999999999874 9999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHH-HHHHHhhhcCCCc
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGAL 381 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~-~l~~~~~~~G~~~ 381 (531)
.|+++|.++|+++|+++|+|++|+.++...+..+|+|++++|+||+++|+|+++||+++++++++. .++......|..+
T Consensus 167 ~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~ 246 (398)
T PRK07504 167 IDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSL 246 (398)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999888788888899999999999999999999999999887665 4666667789999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 461 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~ 461 (531)
+++.+|+++++|+++..|++++.+|+++++++|++||+|.+|+||++++||+|+++++||+|+|+|++|+++++.+.+.+
T Consensus 247 s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 326 (398)
T PRK07504 247 SPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFR 326 (398)
T ss_pred CHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877788899
Q ss_pred HHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 462 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 462 fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
|+++|+++++++||||++||+++|++++|..++++++...|+++++||||||+||+||||+||++||+++
T Consensus 327 ~~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 396 (398)
T PRK07504 327 FLNALKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALKKV 396 (398)
T ss_pred HHHhCCcceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999863
No 24
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=4.2e-66 Score=552.01 Aligned_cols=376 Identities=33% Similarity=0.545 Sum_probs=341.7
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhh----------ccCCCccCCCCCCCCC---------
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEK----------RRASFEYGRYGNPTTV--------- 213 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~----------~~~~~~Y~R~gnPt~~--------- 213 (531)
+.|.++|.|.... ..+++++||||+|+||.|++.+++.+.+.+ ...+|.|+|++||+..
T Consensus 18 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~lA~l 95 (427)
T PRK07049 18 PETQMLNYGYDPE--LSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRLAVY 95 (427)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHHHHH
Confidence 5788999985332 236899999999999999999887765422 2346899999999987
Q ss_pred -CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE-EEEeCCCCHHHHHHhcc----CCCc
Q 009604 214 -GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDPADMEGLEAALN----NNNV 287 (531)
Q Consensus 214 -g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~-v~~vd~~d~e~Le~al~----~~~t 287 (531)
+.+++++++|||+||.+++.+++++||+|+++.+.|+++..++...++.+|++ +.+.+..|+++++++++ +.++
T Consensus 96 eg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~t 175 (427)
T PRK07049 96 EGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRV 175 (427)
T ss_pred hCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCc
Confidence 88899999999999999999999999999999999999988776667888998 55555667888877664 2259
Q ss_pred EEEEEeCCCCCCCcccCHHHHHHHHHh------cCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEE
Q 009604 288 SLFFTESPTNPFLRCVDVKLVSDLCHK------KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl~~I~~la~~------~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv 361 (531)
|+||+|+|+||||.++|+++|.++++. +++++|+||+|.+++.+.++..|+|++++|+||+++|++++++|+++
T Consensus 176 klv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv 255 (427)
T PRK07049 176 SLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVL 255 (427)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEEE
Confidence 999999999999999999999999987 79999999999988888888889999999999999999999999999
Q ss_pred eChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCC--CCCchhhhhhh
Q 009604 362 GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL--KSHPEHHIATQ 439 (531)
Q Consensus 362 ~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl--~s~p~~~l~~~ 439 (531)
+++++++.++..+..+|..++++.+|+++++++++..|++++.+|++.++++|++||+|.+|+||++ ++||+|+++++
T Consensus 256 ~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~ 335 (427)
T PRK07049 256 GRKALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKR 335 (427)
T ss_pred CCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHh
Confidence 9999999999888888999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred hcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009604 440 QMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 519 (531)
Q Consensus 440 ~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~ed 519 (531)
||.|+|+|++|+++++.+.+.+|+++|+++++++||||++||+++|..++|..++++++...|+.+++||||||+||+||
T Consensus 336 ~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~d 415 (427)
T PRK07049 336 QCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIEHPDD 415 (427)
T ss_pred hCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHH
Confidence 99999999999998777788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 009604 520 LKADVLQALHA 530 (531)
Q Consensus 520 li~dL~~AL~~ 530 (531)
||+||+|||++
T Consensus 416 l~~dl~~al~~ 426 (427)
T PRK07049 416 LIADLAQALDA 426 (427)
T ss_pred HHHHHHHHHhc
Confidence 99999999975
No 25
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=2.8e-66 Score=546.00 Aligned_cols=366 Identities=37% Similarity=0.652 Sum_probs=337.8
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|.++|.|...+ ..+++++||||+|+||.|++.. +..+|.|+|++||+.. |++.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~~~ 72 (380)
T PRK06176 3 MQTKLIHGGISED--TTTGAVSVPIYQTSTYRQDAIG--------RPKGYEYSRSGNPTRFALEELIADLEGGVKGFAFA 72 (380)
T ss_pred ccceeeECCCCCC--CCCCCccCCcccCCceecCCCC--------CcCCCcccCCCChhHHHHHHHHHHHhCCCCEEEEC
Confidence 5688899985432 2368999999999999998732 2357999999999987 889999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+.+++ .+++|||+|+++++.|++++.++...++..|+++.++|..|+++++++++++ |++|++|+|+||+|.+
T Consensus 73 SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~~-t~lV~lesP~Nptg~~ 150 (380)
T PRK06176 73 SGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKPN-TKALYLETPSNPLLKI 150 (380)
T ss_pred CHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCcC-ceEEEEECCCCCCcee
Confidence 9999998766 5789999999999999999988877788899999999999999999999884 9999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~~~G~~~ 381 (531)
.|+++|.++||++|++||+|++|+.++..+++.+|+|++++|+||+++||+++++|+++++ +++.++++..+...|..+
T Consensus 151 ~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~ 230 (380)
T PRK06176 151 TDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVL 230 (380)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998887788899999999999999999999999998875 567788888888888889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 461 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~ 461 (531)
++.++|+++++++++..|++++++|+.+++++|++||+|.+|+||+++++|+|+++++||.|+|++++|++++ .+.+.+
T Consensus 231 ~~~~~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~ 309 (380)
T PRK06176 231 GPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN-DSEAVA 309 (380)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985 578899
Q ss_pred HHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 462 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 462 fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
|+++|+++.+++|||+++||+++|+.++|..++++++.++|+++++||||||+||++|||+||++||+++
T Consensus 310 f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 310 FVESLKLFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKI 379 (380)
T ss_pred HHHcCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999864
No 26
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=4.8e-66 Score=548.37 Aligned_cols=375 Identities=37% Similarity=0.589 Sum_probs=348.7
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|.++|.|.... ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||+.. |++.+++++
T Consensus 10 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~~ 87 (403)
T PRK07503 10 FSTRAIHHGYDPL--DHGGALVPPVYLTATFAFPTAEYGAECFAGEEEGHFYSRISNPTLALLEQRMASLEGGEAAVALA 87 (403)
T ss_pred ccchheeCCCCCC--CCCCCccCCcccCcceecCChHHHHHhhccccCCceeeCCCCchHHHHHHHHHHHhCCCcEEEEc
Confidence 6799999985432 2368999999999999999999988877666667999999999987 888899999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+.+++.+++++||+||++.+.|+.++.++...++..|+++.++|..|+++|++++++ +||+|++|+|+||+|.+
T Consensus 88 sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~le~p~NPtG~~ 166 (403)
T PRK07503 88 SGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISD-KTRMVYFETPANPNMRL 166 (403)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCc-cCcEEEEeCCCCCCCee
Confidence 99999999999999999999999999998888777777889999999999999999999987 49999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHH--HhhhcCCC
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVLGGA 380 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~--~~~~~G~~ 380 (531)
.|+++|.++|+++|++||+|++|+.++...++.+|+|++++|+||+++|+|++++|+++++++++++++. .....|..
T Consensus 167 ~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~ 246 (403)
T PRK07503 167 VDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAV 246 (403)
T ss_pred eCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCC
Confidence 9999999999999999999999998877788888999999999999999999999999998888888874 35567889
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHH
Q 009604 381 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 460 (531)
Q Consensus 381 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~ 460 (531)
++++.+|+++++|+++..|++++.+|++.++++|++||.|.+|+||++++||+|+++++|+.|+|++++|+++++.+.+.
T Consensus 247 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~ 326 (403)
T PRK07503 247 MSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGR 326 (403)
T ss_pred CCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987777889
Q ss_pred HHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 461 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 461 ~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+|+++|+++.+++|||+++||+++|.+++|..++++++...|+++++||||||+||++|||+||++||++
T Consensus 327 ~~~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~~ 396 (403)
T PRK07503 327 RFMNALQLFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALDA 396 (403)
T ss_pred HHHHhCCcceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975
No 27
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=6e-66 Score=542.52 Aligned_cols=365 Identities=28% Similarity=0.507 Sum_probs=329.7
Q ss_pred ccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeCCh
Q 009604 155 SLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMASG 224 (531)
Q Consensus 155 t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~sSG 224 (531)
|.++|.|.... ..+++++||||+|+||.|++.++.. ....+|.|+|.|||+.. |++++++++||
T Consensus 1 t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~----~~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG 74 (377)
T TIGR01324 1 TRLIHSGRQPR--FSQGSVNPPLQRASTVLFDSHAAQR----RAKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSG 74 (377)
T ss_pred CeeEECCCCCC--CCCCCccCCeeCCCceeeCChhhhc----CCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcH
Confidence 56788885432 2368999999999999999864432 23457999999999887 88999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccC
Q 009604 225 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 304 (531)
Q Consensus 225 ~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~d 304 (531)
|+|+.+++.+++++||+||++++.|+++..++...++.+|+++.+++..+.++++++++++ ||+|++|+|+||+|.+.|
T Consensus 75 ~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~~-tklV~lesp~Np~g~~~d 153 (377)
T TIGR01324 75 LAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQPN-TKVLFLEAPSSITFEIQD 153 (377)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCCcHHH
Confidence 9999999999999999999999999998877766677889999999877668999999884 999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHH
Q 009604 305 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 384 (531)
Q Consensus 305 l~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~ 384 (531)
+++|+++|+++|+++|+|++|+.+..++++++|+|++++|+||+++||+|+++|+++++++.+++++.....+|..++|.
T Consensus 154 l~~I~~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~ 233 (377)
T TIGR01324 154 IPAIAKAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDAD 233 (377)
T ss_pred HHHHHHHHHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHH
Confidence 99999999999999999999999988899999999999999999999999999999999988888887777889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC-CHHHHHHHH
Q 009604 385 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFI 463 (531)
Q Consensus 385 ~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g-~~~~~~~fl 463 (531)
++|+++++++++..|++++++|+.+++++|++||.|.+|+||++++||+|+++++|+.|+|+|++|++++ +.+.+.+|+
T Consensus 234 ~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~ 313 (377)
T TIGR01324 234 DAYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFL 313 (377)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986 567889999
Q ss_pred HHcCCCCcccccCCcccccccCc-cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 464 DALKIPYIAPSFGGCESIVDQPA-IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 464 ~~L~~~~iavS~Gg~~Sli~~p~-~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
++|+++++++|||+++||+++|. .++|. .+...|+.+++||||||+||++|||+||++||++|
T Consensus 314 ~~l~~~~~~~slG~~~sl~~~~~~~~~~~-----~~~~~~~~~~liR~svGlE~~~dl~~dl~~al~~~ 377 (377)
T TIGR01324 314 DHLQLFGLGYSWGGYESLALCNQPELGHR-----PNIKRNLEGPLIRVHIGLENVDDLKADLKAGFEAI 377 (377)
T ss_pred HhCCcceEeccCCCccceeecCCCCCCHH-----HHHhccCCCCEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999997332 55553 34467888899999999999999999999999875
No 28
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.2e-65 Score=548.74 Aligned_cols=376 Identities=30% Similarity=0.481 Sum_probs=341.0
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
+++|+++|.|...+ ..+++++||||+++||.|++.+++.+++.++..++.|+|.+||+.. |.+.++++
T Consensus 7 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~~ 84 (427)
T PRK05994 7 GFATLAVHAGAQPD--PTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRITNPTNAVLEERVAALEGGTAALAV 84 (427)
T ss_pred CcchhheECCcCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhccccCCcceECCCCccHHHHHHHHHHHhCCCcEEEE
Confidence 36789999985432 2358999999999999999998877766544456899999999877 78889999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+|||+|+.+++.++++|||+||++.+.|+++...+...++..|+++.++|..|++++++++++ +|++|++|+|+||+|.
T Consensus 85 ~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~-~tklV~vesp~NptG~ 163 (427)
T PRK05994 85 ASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITP-RTKAIFIESIANPGGT 163 (427)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCe
Confidence 999999999999999999999999999999988777777888999999999999999999987 4999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChH----------------
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 365 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~---------------- 365 (531)
+.|+++|.++|+++|+++|+|+++++++.++++.+|+|++++|+||+++||++++||+++....
T Consensus 164 v~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~ 243 (427)
T PRK05994 164 VTDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPR 243 (427)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCc
Confidence 9999999999999999999999999998889999999999999999999999999999884221
Q ss_pred -------HHHH----------HHHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCC
Q 009604 366 -------LVTQ----------IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 428 (531)
Q Consensus 366 -------li~~----------l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl 428 (531)
+.+. ........|..+++++||+++++|++|..|++++++|++.++++|++||+|.+|+||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l 323 (427)
T PRK05994 244 PEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGL 323 (427)
T ss_pred chhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 1111 11234567899999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhhhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009604 429 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 507 (531)
Q Consensus 429 ~s~p~~~l~~~~~-~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~l 507 (531)
++||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++++++|||+++||+++|+.++|..++++++...|+++++
T Consensus 324 ~~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~l 403 (427)
T PRK05994 324 PDDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDV 403 (427)
T ss_pred CCCccHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCc
Confidence 9999999999997 789999999998777889999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHHh
Q 009604 508 VRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 508 IRlSvGlE~~edli~dL~~AL~~ 530 (531)
||||||+||++|||+||++||++
T Consensus 404 iRlsvGlE~~~dli~dl~~Al~~ 426 (427)
T PRK05994 404 VRLSIGIEDVDDIIADLEQALAK 426 (427)
T ss_pred EEEEeccCCHHHHHHHHHHHHhh
Confidence 99999999999999999999985
No 29
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.3e-65 Score=544.70 Aligned_cols=367 Identities=36% Similarity=0.591 Sum_probs=338.6
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
.+|.++|.|...+ ..+++++|||+++++|.|++.. ...+|.|+|++||+.. |++++++++
T Consensus 13 ~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~~ 82 (405)
T PRK08776 13 AATAAVRAGIDRD--TAYGAVTPPIVLSSNFSFDGFG--------NKRQYDYTRSGNPTRDLLGEALAELEGGAGGVITA 82 (405)
T ss_pred ccchheeCCCCCC--CCCCCccCCEeccceEEeCCCC--------cccCCcccCCCChHHHHHHHHHHHHhCCCceEEEc
Confidence 6788999985432 2368999999999999998742 1236899999999976 788999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+.+++.+++++||+|+++.+.|++++.++...++..|+++..++..|+++|++++++ +||+|++|+|+||+|.+
T Consensus 83 sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v 161 (405)
T PRK08776 83 TGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQ-SPKLVLIETPSNPLLRI 161 (405)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCcc
Confidence 99999999999999999999999999999888887777788999999998899999999987 49999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEe-ChHHHHHHHHHhhhcCCCc
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~-~~~li~~l~~~~~~~G~~~ 381 (531)
.|+++|.++|+++|++||+|++|+.+..+.++.+|+|++++|+||+++|++++++|+++. ++++.++++......|..+
T Consensus 162 ~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~ 241 (405)
T PRK08776 162 TDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTG 241 (405)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999887778888999999999999999999999998877 4677788877777778889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 461 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~ 461 (531)
+++.+|+++++++++..|++++.+|+..++++|++||.|.+|+||++++||+|+++++++.|+|+|++|+++++.+.+.+
T Consensus 242 s~~~a~l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 321 (405)
T PRK08776 242 SPFDAFLTLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRA 321 (405)
T ss_pred CHHHHHHHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778899
Q ss_pred HHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 462 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 462 fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
|+++|+++.+++||||++||++||++++|..++++++..+|+++++||||||+||+||||+||++||++
T Consensus 322 f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~ 390 (405)
T PRK08776 322 FVDGLRYFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLAR 390 (405)
T ss_pred HHHhCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999985
No 30
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=1.3e-65 Score=541.52 Aligned_cols=370 Identities=38% Similarity=0.630 Sum_probs=344.6
Q ss_pred cccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeCC
Q 009604 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMAS 223 (531)
Q Consensus 154 ~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~sS 223 (531)
.|.++|.|... +.++++++|||++++|.|++.++..+.+.+...+|.|+|++||+.. |++++++++|
T Consensus 1 ~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~s 77 (380)
T TIGR01325 1 ATLAIRGGKER---TEFREHAEALFLTSSFVYDSAAHAADRFAGEIPGFVYSRYANPTVAAFEERIAALEGAERAVATAT 77 (380)
T ss_pred CceeEECCCCC---CCCCCccCCeeCCcceecCCHHHHHHhhccccCCcceecCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 36788988532 2368899999999999999988777666555668999999999976 7889999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCccc
Q 009604 224 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 303 (531)
Q Consensus 224 G~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~ 303 (531)
||+|+.+++.+++++||+|+++.+.|++++.++...++.+|+++.++|..|+++++++++++ +++|++|+|+||+|.+.
T Consensus 78 G~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~-tklV~le~p~np~g~~~ 156 (380)
T TIGR01325 78 GMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKPN-TKLVFVETPSNPLGELV 156 (380)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCCeee
Confidence 99999999999999999999999999999888877788899999999998999999999874 99999999999999999
Q ss_pred CHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchH
Q 009604 304 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP 383 (531)
Q Consensus 304 dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~ 383 (531)
|+++|.++|+++|++||+|++|+.++.++++.+|+|++++|+||+++|+++++||++++++++++.++......|..+++
T Consensus 157 dl~~I~~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p 236 (380)
T TIGR01325 157 DIAALAELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSP 236 (380)
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCH
Confidence 99999999999999999999999887788888999999999999999999999999999999988888877778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHH
Q 009604 384 NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 463 (531)
Q Consensus 384 ~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl 463 (531)
+.+++++++++++..|++++.+++++++++|++||.|.+|+||+++++|+|+++++||.|+|+|++|+++ +.+.+.+|+
T Consensus 237 ~~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~-~~~~~~~f~ 315 (380)
T TIGR01325 237 FNAWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA-DRAAAWKVL 315 (380)
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-CHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 667889999
Q ss_pred HHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009604 464 DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 528 (531)
Q Consensus 464 ~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL 528 (531)
++|+++++++||||++|++.||++++|..++++++...|+.+++||||||+||++|||+||+|||
T Consensus 316 ~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al 380 (380)
T TIGR01325 316 DAVELVSITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGLEDVDDLIADLKRAL 380 (380)
T ss_pred HcCCcceEcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999986
No 31
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=2.1e-65 Score=548.54 Aligned_cols=365 Identities=33% Similarity=0.596 Sum_probs=333.4
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
+++|+++|.|.... .+++++||||+|+||.|++.. +...|.|+|+|||+.. +++.++++
T Consensus 86 ~~~t~~~~~~~~~~---~~~~~~~Pi~~sst~~~~~~~--------~~~~~~Y~r~gnpt~~aLE~~lA~leg~e~ai~~ 154 (464)
T PLN02509 86 SVSTLLVNLDNKFD---PFDAMSTPLYQTATFKQPSAI--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAFCF 154 (464)
T ss_pred CcchHheeCCCCCC---CCCCccCCccccceecCcccc--------ccCCCccCCCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 47899999985432 257999999999999887632 2346899999999876 88899999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+||++|+.+++ .++++||+||++.+.|+++..++...++..|+++.+++..|+++++++++++ ||+|++|+|+||+|.
T Consensus 155 ~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~~-TklV~lesPsNPtG~ 232 (464)
T PLN02509 155 TSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGPQ-TKLVWLESPTNPRQQ 232 (464)
T ss_pred CcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCcC-CeEEEEECCCCCCCC
Confidence 99999987655 5789999999999999998888777778889999999988999999999874 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeCh-HHHHHHHHHhhhcCCC
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 380 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~-~li~~l~~~~~~~G~~ 380 (531)
+.|+++|+++|+++|++||+|++|+.++...++.+|+|++++|+||+++||+++++|+++.++ .+.++++..+...|..
T Consensus 233 i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~ 312 (464)
T PLN02509 233 ISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSG 312 (464)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999888888899999999999999999999999998754 4556666666667888
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHH
Q 009604 381 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 460 (531)
Q Consensus 381 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~ 460 (531)
++++++|+++++|+++..|++++++|+++++++|++||.|++|+||+|++||+|+++++||.|+|+|++|++ ++.+.+.
T Consensus 313 l~p~~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~-~~~~~~~ 391 (464)
T PLN02509 313 LAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT-GSVALSK 391 (464)
T ss_pred cCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 5677889
Q ss_pred HHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 461 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 461 ~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+|+++|+++.+++||||++||+++|+.++|..++++++...||++++||||||+||+||||+||++||+.
T Consensus 392 ~f~~~l~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 392 HLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFRT 461 (464)
T ss_pred HHHHcCCcceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999974
No 32
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=4.2e-65 Score=538.63 Aligned_cols=371 Identities=34% Similarity=0.560 Sum_probs=342.2
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
+++|.++|.|.... ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|++||+.. |.++++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~~ 82 (386)
T PRK06767 5 HMETALIHHGYTSE--EHKGSLTPPLFQTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALAF 82 (386)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEEE
Confidence 46799999995432 2368999999999999999999888877776678999999999976 88999999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+||++|+.+++.+++++||+|+++.+.|++++..+....+.+|+++.+++..|+++++++++++ |++|++|+|+||+|.
T Consensus 83 ~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~~-tklV~lesp~NptG~ 161 (386)
T PRK06767 83 GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRPN-TKLIFVETPINPTMK 161 (386)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCcC-ceEEEEeCCCCCCce
Confidence 9999999999999999999999999999999888877777789999999988999999999874 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHH-HHhhhcCCC
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR-NLHHVLGGA 380 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~-~~~~~~G~~ 380 (531)
+.|+++|.++|+++|++||+|++|+.++.+.++..|+|++++|+||+++|++++++|++++++++++++. ..+...|+.
T Consensus 162 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~ 241 (386)
T PRK06767 162 LIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGI 241 (386)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999888888888899999999999999999999999999988877654 455667888
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHH
Q 009604 381 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 460 (531)
Q Consensus 381 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~ 460 (531)
++++.+|+++++|+++..|++++.++++.++++|+++|+|..|.|| +|+++++||.++|+|++|+++++.+.+.
T Consensus 242 ~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg~vsf~l~~~~~~~~ 315 (386)
T PRK06767 242 MAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGGVISFSIKGGKEETQ 315 (386)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCceEEEEEcCCHHHHH
Confidence 8999999999999999999999999999999999999999999998 6799999999999999999987667889
Q ss_pred HHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 461 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 461 ~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
+|+++|+++++++||||++||+++|.+++|..++++++...|+++++||||||+||++|||+||+|||++|
T Consensus 316 ~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 386 (386)
T PRK06767 316 AFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALKKI 386 (386)
T ss_pred HHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875
No 33
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=1.7e-65 Score=538.77 Aligned_cols=366 Identities=38% Similarity=0.647 Sum_probs=331.9
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
++.|.++|.|.... ..+++++||||++++|.|++.+++.........+|.|+|++||+.. |++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~~ 85 (384)
T PRK06434 8 GFNTRAVQSGELRD--PRFGNVTTPIFETSTFVYPNSEKEAYMDSTRGMPYIYTRWGNPTVQAFEEKYAVLENAEHALSF 85 (384)
T ss_pred CcccceeECCCCCC--CCCCCccCCeeCCcceecCChHHhhhccccccCCcceeCCCChhHHHHHHHHHHHhCCCcEEEe
Confidence 47788999985432 2368999999999999999987655333222356999999999987 88999999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+|||+||.+++.+++++||+||++...|++++.++...+..+|+++.++|.++.+.++ +++.++++|++|+|+||++.
T Consensus 86 sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~~ 163 (384)
T PRK06434 86 SSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTLK 163 (384)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCce
Confidence 9999999999999999999999999999999998877888899999999987666665 55545999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHHHhhhcCCC
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 380 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~~~G~~ 380 (531)
+.|+++|+++||++| +++|+++++++.++++.+|+|++++|.||+++||++++||+++.+ +++.++++..+..+|..
T Consensus 164 v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~ 241 (384)
T PRK06434 164 VPDIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSN 241 (384)
T ss_pred eecHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCC
Confidence 999999999999998 567999999999999999999999999999999999999999874 56777787777778999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHH
Q 009604 381 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 460 (531)
Q Consensus 381 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~ 460 (531)
+++++||+++++|+++..|++++++|++.++++|++||.|++|+||+++ ++++||+|+|+|++|++++ .+.+.
T Consensus 242 ~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~~~sf~l~~-~~~~~ 314 (384)
T PRK06434 242 PDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGGMLSFELRS-MEDVH 314 (384)
T ss_pred CCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCceEEEEECC-HHHHH
Confidence 9999999999999999999999999999999999999999999999984 8899999999999999985 67889
Q ss_pred HHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 461 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 461 ~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+|+++|+++.+++|||+++||++||+.++|..++++++..+|+++++||||||+||++|||+||+|||++
T Consensus 315 ~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlEd~~dLi~dl~~Al~~ 384 (384)
T PRK06434 315 KFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGIEDIDDLIKDIENALSK 384 (384)
T ss_pred HHHHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999974
No 34
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=6.1e-65 Score=539.59 Aligned_cols=376 Identities=36% Similarity=0.616 Sum_probs=347.0
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
.+|.++|.|.... ..++++++|||.+++|.|++.+++.+.+..+..+|.|+|++||+.. |.+++++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~ 86 (400)
T PRK06234 9 FATKAIHGGHIGD--KQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVAA 86 (400)
T ss_pred ccchheECCCCCC--CCCCCccCCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEEc
Confidence 5799999996432 2368999999999999999988777666554567889999999987 778999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
||++|+.+++.+++++||+|+++.+.|+.++..+...++..|+++.++|..|+++++++++++ |++|++|+|+||+|.+
T Consensus 87 sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~~-tklI~iesP~NPtG~v 165 (400)
T PRK06234 87 SGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKAN-TKVVYLETPANPTLKV 165 (400)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhccC-CeEEEEECCCCCCCCc
Confidence 999999999999999999999999999999888777778899999999999999999999874 9999999999999999
Q ss_pred cCHHHHHHHHHhc--CCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHH--hhhcC
Q 009604 303 VDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLG 378 (531)
Q Consensus 303 ~dl~~I~~la~~~--gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~--~~~~G 378 (531)
.|+++|.++|+++ |++||+|++|+.++...++.+|+|++++|+||+++|+|++++|+++++++++++++.. ....|
T Consensus 166 ~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g 245 (400)
T PRK06234 166 TDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTG 245 (400)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcC
Confidence 9999999999997 9999999999988877888889999999999999999999999999999988887753 44678
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHH
Q 009604 379 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 458 (531)
Q Consensus 379 ~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~ 458 (531)
..++++.+|+++++++++..|++++.+|+++++++|++||.|.+|+||++++||+|+++++++.++|+|++|+++++.+.
T Consensus 246 ~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~ 325 (400)
T PRK06234 246 SVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEE 325 (400)
T ss_pred CCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999876677
Q ss_pred HHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 459 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 459 ~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
+.+|+++|+++++++||||++||++||++++|..++++++...|+++++||||||+||++|||+||++||+++
T Consensus 326 ~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 326 GKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDLI 398 (400)
T ss_pred HHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999863
No 35
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=5.7e-65 Score=535.69 Aligned_cols=364 Identities=38% Similarity=0.660 Sum_probs=335.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|+++|+|...+ ..+++++||||+++||.|++.. ...+|.|+|++||+.. |.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~~~~ 72 (377)
T PRK07671 3 AKTKLIHGGIIGD--PSTGAVSVPIYQVSTYKQEAVG--------KHQGYEYSRTGNPTRAALEELIAVLEGGHAGFAFG 72 (377)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCCC--------CcCCCCcCCCCChHHHHHHHHHHHHhCCCceEEeC
Confidence 4688999985432 2358999999999999988742 2356899999999987 888999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+.+++ .++++||+|+++.+.|++++..+...++.+|+++.+++..|+++++++++++ ||+|++|+|+||+|.+
T Consensus 73 sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~-tklV~le~P~NPtg~~ 150 (377)
T PRK07671 73 SGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRPN-TKAIYVETPTNPLLKI 150 (377)
T ss_pred CHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCCcc
Confidence 9999888765 5789999999999999989887777778899999999988999999999884 9999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEe-ChHHHHHHHHHhhhcCCCc
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~-~~~li~~l~~~~~~~G~~~ 381 (531)
.|+++|.++|+++|+++|+|++|+.++..++..+|+|++++|+||+++||+++++|+++. +++++++++..+...|..+
T Consensus 151 ~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~ 230 (377)
T PRK07671 151 TDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGIL 230 (377)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999887778888999999999999999999989998776 4578888888888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 461 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~ 461 (531)
+++.+|+++++++++..|++++++|++.|+++|+++|+|.+|+||+++++|+|+++++||.|+|++++|++ ++.+.+.+
T Consensus 231 ~~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~-~~~~~~~~ 309 (377)
T PRK07671 231 GPQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV-GSEETANK 309 (377)
T ss_pred CHHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe-CCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 56788999
Q ss_pred HHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 462 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 462 fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
|+++|+++.+++|||+++||+++|+.++|..++++++..+|+.+++||||||+||++|||+||++||+
T Consensus 310 f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 377 (377)
T PRK07671 310 VLERLQYFTLAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGIEDGEDLIEDLAQALA 377 (377)
T ss_pred HHHhCCcceEccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999985
No 36
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=1.7e-64 Score=539.02 Aligned_cols=374 Identities=38% Similarity=0.618 Sum_probs=338.0
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|.++|+|...+ ...++++||||+++||.|++.+++.+.+.+...+|.|+|++||+.. |.+++++++
T Consensus 2 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~ 79 (418)
T TIGR01326 2 FETLQLHAGQEPD--PTTGSRAVPIYQTTSYVFDSTEHAAALFGLQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVA 79 (418)
T ss_pred ccceeEECCCCCC--CCCCCccCCccCCCCeecCCHHHHHHhhccCcCCceeECCCChhHHHHHHHHHHHhCCCeEEEEc
Confidence 4688999985432 2358999999999999999998866655444456899999999987 889999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+..++.+++++||+|+++.+.|++++..+...++..|+++.+++..|+++++++++++ +++|++|+|+||+|.+
T Consensus 80 sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~-t~~V~le~p~NPtg~v 158 (418)
T TIGR01326 80 SGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDEN-TKAVFAETIGNPAINV 158 (418)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCee
Confidence 999999999999999999999999999999888877788899999999988999999999874 9999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHH---------------
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV--------------- 367 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li--------------- 367 (531)
.|+++|.++|+++|+++|+|++|+.++...++..|+|++++|+||+++|+|+++||+++.++++.
T Consensus 159 ~dl~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~ 238 (418)
T TIGR01326 159 PDIEAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPS 238 (418)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCc
Confidence 99999999999999999999999988777888889999999999999999999999888543211
Q ss_pred ----------------HH-HHHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCC
Q 009604 368 ----------------TQ-IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 430 (531)
Q Consensus 368 ----------------~~-l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s 430 (531)
.+ .....+..|..++|..+|+++++++++..|++++.+|+..++++|.+||+|..|+||++++
T Consensus 239 q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~ 318 (418)
T TIGR01326 239 YHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLAS 318 (418)
T ss_pred cccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 11 1123455688889999999999999999999999999999999999999999999999999
Q ss_pred Cchhhhhhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEE
Q 009604 431 HPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 509 (531)
Q Consensus 431 ~p~~~l~~~~~-~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIR 509 (531)
||+|+++++|| .|+|+|++|+++++.+.+.+|+++|+++++++|||+++||+++|..++|..++++++.++|+++++||
T Consensus 319 ~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR 398 (418)
T TIGR01326 319 HPHHALAKKYLPKGFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIR 398 (418)
T ss_pred CccHHHHHHhccCCCcceEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 99999999999 78999999999877677899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHH
Q 009604 510 FSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 510 lSvGlE~~edli~dL~~AL~ 529 (531)
||||+||++|||+||+|||+
T Consensus 399 ~svGlE~~~dl~~dl~~Al~ 418 (418)
T TIGR01326 399 LSVGIENIDDIIADLEQALE 418 (418)
T ss_pred EEecCCCHHHHHHHHHHhhC
Confidence 99999999999999999985
No 37
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-64 Score=529.35 Aligned_cols=364 Identities=41% Similarity=0.690 Sum_probs=336.2
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
+++|.++|.|.. ..+++++||||+|+||.|++. .+|.|+|.+||+.. |.+.++++
T Consensus 2 ~~~t~~~~~~~~----~~~~~~~~pi~~~~~~~~~~~-----------~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~~ 66 (376)
T PRK06460 2 KDATRTVREDID----EATGAITTPIYQTTAYHYPEG-----------EKYRYSREANPTVLELTKKIVELENAEMGVAF 66 (376)
T ss_pred CcceeeeecCCC----CCCCCccCCccCCcceeeCCC-----------CCcceeCCCCccHHHHHHHHHHHhCCCcEEEe
Confidence 378899999842 236899999999999999863 26899999999987 78889999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
++|++|+..++.+++++||+|+++.+.|++++..+...++..|+++..++.++.+.+++.+++ ++|+|++|+|+||+|.
T Consensus 67 ~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~-~tklV~l~sp~NPtG~ 145 (376)
T PRK06460 67 SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSK-RYDVVFVENITNPLLR 145 (376)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCc
Confidence 999999999999999999999999999999998887778889999999987776667766665 5999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCc
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~ 381 (531)
+.|+++|.++|+++|+++|+|++|+.++...++..++|++++|+||+++|+++.++|++++++++++.++..+..+|..+
T Consensus 146 v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~ 225 (376)
T PRK06460 146 VVDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSL 225 (376)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998876677777899999999999999999999999999999999988888888889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 461 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~ 461 (531)
++..+|+++++++++..|++++.+|++.++++|++||+|.+|+||+|++||+|+++++|+.|+|+|++|+++++.+.+.+
T Consensus 226 ~~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~ 305 (376)
T PRK06460 226 DPHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALK 305 (376)
T ss_pred CHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778999
Q ss_pred HHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 462 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 462 fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
|+++|+++.+++||||++|+++||++++|..++++++.+.|+++++||||||+||+||||+||++||+++
T Consensus 306 ~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 306 VMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGIEDVNDLIEDLDRALSTL 375 (376)
T ss_pred HHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999864
No 38
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=4.2e-64 Score=529.44 Aligned_cols=364 Identities=34% Similarity=0.602 Sum_probs=334.1
Q ss_pred cccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeCC
Q 009604 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMAS 223 (531)
Q Consensus 154 ~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~sS 223 (531)
+|.++|.|... . .+++++||||+|+||.|++.+ ...+|.|+|.|||+.. |++++++++|
T Consensus 2 ~t~~~~~~~~~--~-~~~~~~~pi~~~~~~~~~~~~--------~~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~s 70 (378)
T TIGR01329 2 STLLVNTDNKN--D-PYDASSMPIYQTATFKQPLAI--------ENGPYDYTRSGNPTRTALESLLAKLDKADRAFAFSS 70 (378)
T ss_pred CceeEeCCCCC--C-CCCCcCCCeecCcceecCCcc--------ccCCCccCCCCChHHHHHHHHHHHHhCCCcEEEECC
Confidence 57889998542 2 268999999999999988643 2246999999999986 8899999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCccc
Q 009604 224 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 303 (531)
Q Consensus 224 G~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~ 303 (531)
||+|+.+++. ++++||+|+++.+.|+++..++...++.+|+++.++|..|++++++++++ +||+|++|+|+||+|.+.
T Consensus 71 G~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~-~tklv~le~psnptg~v~ 148 (378)
T TIGR01329 71 GMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGP-KTKLVLLESPTNPLQKIV 148 (378)
T ss_pred HHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCeee
Confidence 9999988775 88999999999999999888777777888999999999999999999987 499999999999999999
Q ss_pred CHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHHHhhhcCCCch
Q 009604 304 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALN 382 (531)
Q Consensus 304 dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~~~G~~~s 382 (531)
|+++|+++||++|+++|+|++++.++.+.++.+|+|++++|+||+++||+++++|+++.+ +++.++++..+...|..++
T Consensus 149 dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~ 228 (378)
T TIGR01329 149 DIRKISEMAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLA 228 (378)
T ss_pred cHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCC
Confidence 999999999999999999999998888888899999999999999999999999999875 4566788877777888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHH
Q 009604 383 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 462 (531)
Q Consensus 383 ~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~f 462 (531)
++.+|+++++++++..|++++.+|+..++++|++||++.+|.||+++++|+|+++++++.|+|+|++|++ ++.+.+.+|
T Consensus 229 ~~~a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~ 307 (378)
T TIGR01329 229 PFDCWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRL 307 (378)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 566668999
Q ss_pred HHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 463 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 463 l~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
++.|+++++++|+||++||++||+.++|..++++++.+.|+++++||||||+||+||||+||++||+++
T Consensus 308 ~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 308 VEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFVTA 376 (378)
T ss_pred HHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999863
No 39
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=5.6e-64 Score=527.22 Aligned_cols=358 Identities=48% Similarity=0.809 Sum_probs=338.3
Q ss_pred CcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeCChHHHHHHHHHHhccCCC
Q 009604 171 DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMASGMSASTVMLLALVPAGG 240 (531)
Q Consensus 171 ~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~sSG~~Ai~~al~all~pGD 240 (531)
++++||||+|+||.|++.+++.+.+.+...++.|+|++||+.. |.+++++++||++|+.+++.+++++||
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd 80 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGD 80 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCC
Confidence 3689999999999999999888777666678999999999987 889999999999999999999999999
Q ss_pred EEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEE
Q 009604 241 HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 320 (531)
Q Consensus 241 ~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lI 320 (531)
+|+++.+.|++++..+...++..|+++.+++.+|++++++++++ ++++|++|+|+||+|.+.|+++|+++|+++|++||
T Consensus 81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~li 159 (369)
T cd00614 81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLV 159 (369)
T ss_pred EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEE
Confidence 99999999999988887777888999999999999999999987 49999999999999999999999999999999999
Q ss_pred EeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeCh-HHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHH
Q 009604 321 IDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLR 399 (531)
Q Consensus 321 vD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~-~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r 399 (531)
+|++|+.++.++++.+|+|++++|+||+++|++++++|++++++ +++++++.....+|..+++..+|+++++++++..|
T Consensus 160 vD~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r 239 (369)
T cd00614 160 VDNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLR 239 (369)
T ss_pred EECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHH
Confidence 99999998888888899999999999999999999999999987 88899988888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcc
Q 009604 400 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 479 (531)
Q Consensus 400 ~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~ 479 (531)
++++.+|+++++++|+++|.|.+|+||+++++|+|+++++++.|+|+|++|+++++.+.+.+|+++|+++++++||||++
T Consensus 240 ~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~ 319 (369)
T cd00614 240 MERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVE 319 (369)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999866788999999999999999999999
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 480 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 480 Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
||+++|..++|..++++++...|+++++||||||+||++|||+||++||+
T Consensus 320 sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGlE~~~dl~~dl~~al~ 369 (369)
T cd00614 320 SLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGIEDVEDLIADLEQALK 369 (369)
T ss_pred eeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999984
No 40
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.1e-63 Score=527.89 Aligned_cols=365 Identities=38% Similarity=0.631 Sum_probs=333.6
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|+++|.|.... ..+++++||||+|+||.|++.+. ...+|.|+|+++|+.. |.+.+++++
T Consensus 13 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~-------~~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~ 83 (388)
T PRK07811 13 FATRAIHAGYEPD--PATGAVNPPIYASSTFAQDGVGG-------LRGGYEYARTGNPTRTALEEQLAALEGGAYGRAFS 83 (388)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCccc-------ccCCCcccCCCCccHHHHHHHHHHHhCCCceEEeC
Confidence 5788999985432 23689999999999999887532 1246899999999987 888999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
||++|+.+++.+++++||+|+++.+.|++++..+...++.+|+++.+++..|+++|++++++ +||+|++|+|+||+|.+
T Consensus 84 sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~ 162 (388)
T PRK07811 84 SGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITP-RTKLIWVETPTNPLLSI 162 (388)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCc-CCeEEEEECCCCCccee
Confidence 99999999999999999999999999999888877777888999999999999999999988 49999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~~~G~~~ 381 (531)
.|+++|.++|+++|++||+|++|+.+....++.+|+|++++|++|+++|++++++|+++++ +++.++++..+...|...
T Consensus 163 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~ 242 (388)
T PRK07811 163 TDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVP 242 (388)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998877788888999999999999999999999988875 567777777777778888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 461 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~ 461 (531)
++..+|+++++|+++..|++++.+|++.++++|++||+|.+|+||++++||+|+++++|+.|+|+|++|+++++.+.+.+
T Consensus 243 s~~~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 322 (388)
T PRK07811 243 GPFDAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARD 322 (388)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778899
Q ss_pred HHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 462 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 462 fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
|+++|+++.+++|||+++||++||..++|..++++ ..|+.+++||||||+||++|||+||++||++
T Consensus 323 f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 388 (388)
T PRK07811 323 FCARTKVFTLAESLGGVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLADLEQALGQ 388 (388)
T ss_pred HHHhCCcceeeccCCCCcceEeCCcccCcccCCHh---hcCCCCCEEEEEeCCCCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999998854 4699999999999999999999999999974
No 41
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.4e-63 Score=526.12 Aligned_cols=370 Identities=26% Similarity=0.428 Sum_probs=336.8
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEe
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIM 221 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~ 221 (531)
+++|+++|.|.... ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|++||+.. |+++++++
T Consensus 9 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~ 86 (394)
T PRK07050 9 ALQTRIVQPDDQIP--PGFRSFVTPVARASTVVFPDLATMRALDWRQDVQWRYGLHATPTSLALAQRLAEIEGGRHALLQ 86 (394)
T ss_pred CccchheECCCCCC--CCCCCccCCeeCCcceecCCHHHHHhhcccccCCcccCCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 57799999996432 2368999999999999999998887666555568999999999987 88899999
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+|||+|+.+++.+++++||+||++.+.|++++.++...+..+|+++.+++..+.++++++++++ ||+|++|+|+||+|.
T Consensus 87 ~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~~-tklV~le~p~Np~~~ 165 (394)
T PRK07050 87 PSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQPN-TRLIWLEAPGSVTME 165 (394)
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCcc
Confidence 9999999999999999999999999999999887766678889999999987888999999884 999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 380 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~-~~~li~~l~~~~~~~G~~ 380 (531)
+.|+++|+++|+++|++||+|++|+.+..++++.+|+|++++|+||+++|++++++|+++. +++++++++..+...|..
T Consensus 166 ~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~ 245 (394)
T PRK07050 166 VPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIG 245 (394)
T ss_pred HhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999998899999999999999999999999999997776 567888898888888999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC--CHHH
Q 009604 381 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLTA 458 (531)
Q Consensus 381 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g--~~~~ 458 (531)
++++++|+++++++++..|++++++|+.+++++|++||+|.+|+||+++++|+|.++++++.++|++++|++++ +.+.
T Consensus 246 ~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~ 325 (394)
T PRK07050 246 VSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQ 325 (394)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986 3578
Q ss_pred HHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 459 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 459 ~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+.+|++.|+++++++||||++||++ |..++|.... +.++.+++||||||+||+||||+||++||++
T Consensus 326 ~~~~~~~l~~~~~~~s~G~~~sl~~-~~~~~~~~~~-----~~~~~~~~iR~svGlE~~~dl~~dl~~al~~ 391 (394)
T PRK07050 326 VDAFVEALELFAIGWSWGGACSLAM-PYDVASMRTA-----KWPHRGTLVRLYIGLEDEADLIADLEQALEA 391 (394)
T ss_pred HHHHHHcCCCCeeccccCCccceEe-eCcccccchh-----hcCCCCCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 8776665542 2336779999999999999999999999985
No 42
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.3e-62 Score=518.22 Aligned_cols=365 Identities=38% Similarity=0.610 Sum_probs=337.1
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|+++|.|...+ ...+++++|||++++|.|++.++ ..+|.|+|.+||+.. |.+++++++
T Consensus 7 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~ 76 (390)
T PRK08064 7 IDTLLLHNQYKHD--KQTGAVNVPIYHASTFHQFDFDT--------FGKYDYSRSGNPTREALEDIIAELEGGTKGFAFA 76 (390)
T ss_pred cccceeeCCCCCC--CCCCCccCCcccCcceecCcccc--------cCCCcccCCCChhHHHHHHHHHHHhCCCCeEEEC
Confidence 5788999986532 23689999999999999887542 246899999999987 888999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||.|+.+++. ++++||+||++.+.|++++..+...++..|+++.+++..|+++++++++++ |++|++|+|+||+|.+
T Consensus 77 sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~-tklV~l~~p~NptG~~ 154 (390)
T PRK08064 77 SGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKPN-TKLFYVETPSNPLLKV 154 (390)
T ss_pred CHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCcEe
Confidence 99999998886 789999999999999999888877778899999999998999999999874 9999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~~~G~~~ 381 (531)
.|+++|.++|+++|+++|+|++|+.+....++++|+|++++|+||+++|++++++|+++.+ ++++++++..+..+|..+
T Consensus 155 ~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~ 234 (390)
T PRK08064 155 TDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVL 234 (390)
T ss_pred ccHHHHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998877777888999999999999999999999988775 578889988888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 461 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~ 461 (531)
++.++|+++++++++..|++++.+|+.+++++|+++|.|.+|+||+++++|+|+++++++.|+|+|++|++++ .+++.+
T Consensus 235 ~~~~a~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~ 313 (390)
T PRK08064 235 GVQDCWLVLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS-EEAVRQ 313 (390)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975 678899
Q ss_pred HHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 462 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 462 fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
|+++|+++.+++|||+++||+++|+.++|..++.+++..+|+.+++||||||+||++|||+||++||++
T Consensus 314 f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 314 FVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred HHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999985
No 43
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=9.9e-62 Score=516.79 Aligned_cols=371 Identities=29% Similarity=0.503 Sum_probs=334.7
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhcc----CCCccCCCCCCCCC----------CCCcE
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR----ASFEYGRYGNPTTV----------GAEST 218 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~----~~~~Y~R~gnPt~~----------g~e~~ 218 (531)
..+.++|+|....+ .++++||||+|+||.|++.+++.+.+.++. .+|.|+|++||+.. |.+.+
T Consensus 18 ~~~~~~~~~~~~~~---~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~~ 94 (418)
T PLN02242 18 PAAALASARHEFGE---HGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEAA 94 (418)
T ss_pred hHHHHhcCCCCCCC---CCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCeE
Confidence 45788999876532 467899999999999999998887775542 35899999999988 88999
Q ss_pred EEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhc-ccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCC
Q 009604 219 VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL-PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 297 (531)
Q Consensus 219 i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l-~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~N 297 (531)
++++|||+|+.+++.+++++||+|+++.+.|+++...+...+ +..|+++++++..|++++++++++++||+|++++|+|
T Consensus 95 l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~N 174 (418)
T PLN02242 95 YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISN 174 (418)
T ss_pred EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCC
Confidence 999999999999999999999999999999998877665544 3479999999988999999999873499999999999
Q ss_pred CCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh---
Q 009604 298 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--- 374 (531)
Q Consensus 298 PtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~--- 374 (531)
|+|.+.|+++|+++|+++|++||+|++|. ++.+++..+|+|++++|+||+++|++++++|++++++++++.++..+
T Consensus 175 PtG~v~dl~~I~~la~~~gi~livDea~~-~~~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~ 253 (418)
T PLN02242 175 PTLTVADIPELARIAHEKGVTVVVDNTFA-PMVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGA 253 (418)
T ss_pred CCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCCCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh
Confidence 99999999999999999999999999995 55567778899999999999999999999999999999988887653
Q ss_pred -hhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhc---CCcccEEEE
Q 009604 375 -HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM---TGFGGVVSF 450 (531)
Q Consensus 375 -~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~---~g~g~ivsf 450 (531)
...|..++++.+|+++++++++..|++++.+|++.++++|++++ .+|.||++++||+|+++++++ .|+|+|++|
T Consensus 254 ~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~--~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf 331 (418)
T PLN02242 254 LMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG--LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCL 331 (418)
T ss_pred hhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC--CEEECCCCCCCccHHHHHHhcccCCCceeEEEE
Confidence 34677889999999999999999999999999999999999996 389999999999999999999 589999999
Q ss_pred EEcCCHHHHHHHHHHcCCC----CcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHH
Q 009604 451 EVDGDLTATIKFIDALKIP----YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED-FEDLKADVL 525 (531)
Q Consensus 451 ~l~g~~~~~~~fl~~L~~~----~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~-~edli~dL~ 525 (531)
+++ +.+.+.+|+++|+++ .+++|||+++|++++|+.++|..++++++...|+++++||||||+|+ ++|||+||+
T Consensus 332 ~l~-~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~~dli~dl~ 410 (418)
T PLN02242 332 DMD-TEERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTGTLEQRWSQFE 410 (418)
T ss_pred EEC-CHHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCCCHHHHHHHHH
Confidence 996 467899999999977 88999999999999999999999999999999999999999999995 999999999
Q ss_pred HHHHh
Q 009604 526 QALHA 530 (531)
Q Consensus 526 ~AL~~ 530 (531)
|||++
T Consensus 411 ~al~~ 415 (418)
T PLN02242 411 KALSA 415 (418)
T ss_pred HHHHH
Confidence 99985
No 44
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=5.4e-61 Score=502.93 Aligned_cols=346 Identities=35% Similarity=0.564 Sum_probs=313.3
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeC
Q 009604 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMA 222 (531)
Q Consensus 153 ~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~s 222 (531)
++|.++|.|...+ ..+++++||||+|+||.|++. ++..+|.|+|++||+.. |++++++++
T Consensus 7 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~--------~~~~~~~Y~R~~~p~~~~le~~lA~leg~~~~v~~~ 76 (364)
T PRK07269 7 INTILAQAGIKSD--EATGALVTPLHFSTTYQHPEF--------GQSTGFDYTRTKNPTRAKLEETLAAIESADYALATS 76 (364)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCC--------CCcCCcceeCCCCccHHHHHHHHHHHhCCCeEEEeC
Confidence 6788999985432 236899999999999998873 22357999999999987 899999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+.+++ .++++||+||++.+.|+++..++....+..++++.+. .|+++++++++++ ||+|++|+|+||+|.+
T Consensus 77 sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--~d~~~l~~~i~~~-TklV~lesP~NPtg~~ 152 (364)
T PRK07269 77 SGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--NTEEELIAAIEED-TDIVYIETPTNPLMVE 152 (364)
T ss_pred CHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec--CCHHHHHHhcCcC-ceEEEEECCCCCCCee
Confidence 9999999988 4679999999999999999887766555556665553 5899999999874 9999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~~~G~~~ 381 (531)
.|+++|+++|+++|+++|+|+||+.++.++++.+|+|++++|+||+++||+|+++|+++++ +++.++++..+...|..+
T Consensus 153 ~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~ 232 (364)
T PRK07269 153 FDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVL 232 (364)
T ss_pred eCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999888889999999999999999999999999998874 677888887777788999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 461 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~ 461 (531)
+++++|+++++|++|..|++++++|+++++++|++||+|.+|.||+ .|++++|+++ +.+.+.+
T Consensus 233 s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg----------------~gg~~sf~~~-~~~~~~~ 295 (364)
T PRK07269 233 SPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG----------------KGGMISFKVA-DETRIPH 295 (364)
T ss_pred CHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC----------------cCcEEEEEEC-CHHHHHH
Confidence 9999999999999999999999999999999999999999999997 4899999997 4677899
Q ss_pred HHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 462 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 462 fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
|++.|+++.+++|||+.+|++++|+.++|..+++++|..+|+.+++||||||+||++|||+||+|||+
T Consensus 296 f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~~~dli~dl~~al~ 363 (364)
T PRK07269 296 ILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLKQALE 363 (364)
T ss_pred HHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999996
No 45
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-59 Score=496.42 Aligned_cols=363 Identities=35% Similarity=0.554 Sum_probs=330.8
Q ss_pred cccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeCChH
Q 009604 156 LAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMASGM 225 (531)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~sSG~ 225 (531)
.++|++... ..+++++||||+++||.|++.+++.+.+.+...+|.|+|++||+.. |++++++++|||
T Consensus 12 ~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~ 88 (389)
T PRK05968 12 ALITAHDEG---NAFDAVVPPIFQTSLFTFDSYDEMEDVYAGEKVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFASGM 88 (389)
T ss_pred heeecCCCc---cCCCCccCCccCCcceecCCHHHHHHhhcCCCCCccccCCCChhHHHHHHHHHHHhCCCcEEEECCHH
Confidence 467887553 2478999999999999999998888777666667999999999976 888999999999
Q ss_pred HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccCH
Q 009604 226 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV 305 (531)
Q Consensus 226 ~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl 305 (531)
+|+.+++.++++|||+|+++.+.|++++..+...++..|+++.++|..|++++++++ + +||+|++|+|+|+++.+.|+
T Consensus 89 ~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl 166 (389)
T PRK05968 89 AAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKAL-P-GAKLLYLESPTSWVFELQDV 166 (389)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHH
Confidence 999999999999999999999999999988877788889999999999999999998 4 48999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhh-hcCCCchHH
Q 009604 306 KLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGALNPN 384 (531)
Q Consensus 306 ~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~-~~G~~~s~~ 384 (531)
++|.++|+++|++||+|++|+.+...+++.+|+|++++|+||+++||+++++|+++++++++++++.... ..|..++++
T Consensus 167 ~~i~~la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~ 246 (389)
T PRK05968 167 AALAALAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPF 246 (389)
T ss_pred HHHHHHHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChH
Confidence 9999999999999999999998877778889999999999999999999889999999998888876443 567889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHH
Q 009604 385 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 464 (531)
Q Consensus 385 ~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~ 464 (531)
.+|+++++|+++..|++++.+++++++++|+++|.|..|.||++++|| ++++.|+|+|++|+++++ ..+.+|++
T Consensus 247 ~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~-----~~~~~g~g~~~sf~~~~~-~~~~~f~~ 320 (389)
T PRK05968 247 EAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHP-----PAGLSGTSGLFSFIFREG-IDVRAFAD 320 (389)
T ss_pred HHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCh-----HHhCCCCceEEEEEECCH-HHHHHHHH
Confidence 999999999999999999999999999999999999999999999988 456788999999999854 57899999
Q ss_pred HcCCCCcccccCCcccccccCccccccC-CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 465 ALKIPYIAPSFGGCESIVDQPAIMSYWD-LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 465 ~L~~~~iavS~Gg~~Sli~~p~~~s~~~-~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+|+.+++++|||+++||++ |+.++|.. .+.+.+...|+++++||||||+||++|||+||+|||++
T Consensus 321 ~L~~~~~~~s~G~~~slv~-p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 321 ALKLFRLGVSWGGHESLVV-PAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred hCCccEEecCCCCCCceee-eCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 9999999999999999999 99998887 45788889999999999999999999999999999985
No 46
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=5.5e-59 Score=488.64 Aligned_cols=354 Identities=35% Similarity=0.564 Sum_probs=313.0
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC---------CCCcEEEeC
Q 009604 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV---------GAESTVIMA 222 (531)
Q Consensus 152 ~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~---------g~e~~i~~s 222 (531)
++.|.++|.|.... ..+++++||||+|+||.|++. .+..+|.|+|++||+.. -++++++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~--------~~~~~~~y~ry~~p~~~~Le~~lA~l~~~~~v~~~ 72 (366)
T PRK07582 3 GDGTRSVHAGGPEA--VPGEPVLPGPVFAAPYHLSPG--------EPTGPDTYGRASNPTWRALEAALGELEGAEALVFP 72 (366)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccccceEEccCc--------cccCCceeECCCCccHHHHHHHHHHHcCCCEEEEC
Confidence 46799999985432 236899999999999999853 12346889999999987 457899999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcc
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 302 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v 302 (531)
|||+|+.+++.+++++||+|+++.+.|+++..+++..++.+|+++.+++..+... .+.+ ++++|++|+|+||+|.+
T Consensus 73 sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~---~~~~-~t~lV~le~p~NPtg~v 148 (366)
T PRK07582 73 SGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE---AALA-GADLVLAETPSNPGLDV 148 (366)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH---Hhcc-CceEEEEECCCCCCCCc
Confidence 9999999999999999999999999999988777666778899999998765432 3334 49999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEe-ChHHHHHHHHHhhhcCCCc
Q 009604 303 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL 381 (531)
Q Consensus 303 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~-~~~li~~l~~~~~~~G~~~ 381 (531)
.|+++|.++|+++|+++++|++|+.+..+.++++|+|++++|+||+++|++++++|++++ +++++++++.++...|..+
T Consensus 149 ~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~ 228 (366)
T PRK07582 149 CDLAALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIP 228 (366)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999998777778888899999999999999999999999887 4778888888888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHH
Q 009604 382 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 461 (531)
Q Consensus 382 s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~ 461 (531)
+++.+|+++++++++..|++++++|++.++++|++||+|.+|+||++++||+|+++++||.|+|++++|+++ +.+.+.+
T Consensus 229 ~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~~ 307 (366)
T PRK07582 229 GPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAER 307 (366)
T ss_pred CHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997 5678999
Q ss_pred HHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 462 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 462 fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
|+++++++.+++|||+++|++.++..+ ..++++++||||||+||++|||+||++||+++
T Consensus 308 ~~~~l~~~~~~~s~G~~~sl~~~~~~~-----------~~~~~~~liR~svGlE~~~dli~dl~~al~~~ 366 (366)
T PRK07582 308 FVAASRLVVAATSFGGVHTSADRRARW-----------GDAVPEGFVRLSCGIEDTDDLVADLERALDAL 366 (366)
T ss_pred HHHhCCcceecccCCCccchhhhHHHc-----------CCCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 999999999999999999987544221 13467899999999999999999999999864
No 47
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1.3e-57 Score=478.43 Aligned_cols=351 Identities=34% Similarity=0.588 Sum_probs=319.6
Q ss_pred CCccccccccCCcCCCCCCCCcccCCcccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEE
Q 009604 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVI 220 (531)
Q Consensus 151 ~~~~t~~~~~~~~~~~~~~~~~~~~Pi~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~ 220 (531)
++++|.++|.|...+ ..+++++||||+|+||.|++.. ...+|.|+|++||+.. |.+.+++
T Consensus 3 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~pt~~~le~~la~l~g~~~~~~ 72 (366)
T PRK08247 3 STIETKLAQIGNRSD--ERTGTVNPPVYFSTAYRHEGIG--------ESTGFDYSRTGNPTRGVLEQAIADLEGGDQGFA 72 (366)
T ss_pred CCcchhheeCCCCCC--CCCCCccCCcccCcccccCCCC--------CcCCccccCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 457899999985432 2368999999999999887632 2357999999999987 8889999
Q ss_pred eCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCC
Q 009604 221 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 300 (531)
Q Consensus 221 ~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG 300 (531)
++|||+|+.+++ .++++||+|+++.+.|++++..+...++.+|+++.++|..|++++++++++ +|++|++|+|+||+|
T Consensus 73 ~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklv~le~P~NP~~ 150 (366)
T PRK08247 73 CSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITP-NTKAIFIETPTNPLM 150 (366)
T ss_pred EcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhccc-CceEEEEECCCCCCC
Confidence 999999998775 688999999999999999988887778889999999999999999999988 499999999999999
Q ss_pred cccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHHHhhhcCC
Q 009604 301 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG 379 (531)
Q Consensus 301 ~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~~~G~ 379 (531)
.+.|+++|+++|+++|+++|+|++|+.++...++..|+|++++|+||+++|++++++|+++++ +++.++++..+...|.
T Consensus 151 ~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~ 230 (366)
T PRK08247 151 QETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGA 230 (366)
T ss_pred cHHHHHHHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999998888888888999999999999999999999999986 6788888877777888
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHH
Q 009604 380 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 459 (531)
Q Consensus 380 ~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~ 459 (531)
.++++.+|+++++++++..|++++++|++.++++|+++|++..|.||+ .|++++|++++ .+..
T Consensus 231 ~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~----------------~gg~~sf~~~~-~~~~ 293 (366)
T PRK08247 231 VLSPFDSWLLIRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG----------------RGGMLSFRLQD-EEWV 293 (366)
T ss_pred CCChHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC----------------cCcEEEEEECC-HHHH
Confidence 899999999999999999999999999999999999999999999986 37899999974 5667
Q ss_pred HHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 460 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 460 ~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.+|++.|+++.+++|||+.+|++.+|++++|..+++++|...|+.+++||||+|+|+.+|||+||+|||++
T Consensus 294 ~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGlE~~~dl~~dl~~al~~ 364 (366)
T PRK08247 294 NPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGIENVEDLIADLKQAFKQ 364 (366)
T ss_pred HHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999975
No 48
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=2.8e-27 Score=243.65 Aligned_cols=288 Identities=20% Similarity=0.211 Sum_probs=216.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHh--c----cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhc
Q 009604 214 GAESTVIMASGMSASTVMLLAL--V----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAAL 282 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~al--l----~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al 282 (531)
..++++|+++|++++++++.+. . +.|.|||++..+|.++...++.+ +..|.+|++++.+ |+++|+++|
T Consensus 60 ~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl~V~~~G~v~~e~L~~al 138 (386)
T COG1104 60 DPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEAL 138 (386)
T ss_pred CCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHH-HhcCCeEEEeCCCCCCeEcHHHHHHhc
Confidence 3457777777889999999873 2 25789999999999999888655 7889999998865 899999999
Q ss_pred cCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEEEE
Q 009604 283 NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 283 ~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv 361 (531)
+++ |.+|.+...||.+|.++|+++|.++|+++|+++++|.+++.+ ++.+...+++|++.+|.||+.|+.| .|+++
T Consensus 139 ~~~-T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkG---iGaLy 214 (386)
T COG1104 139 RPD-TILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKG---IGALY 214 (386)
T ss_pred CCC-ceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCc---eEEEE
Confidence 985 999999999999999999999999999999999999998875 5567777789999999999999998 67777
Q ss_pred eChHH-HH-HHHHHhh---hcCCCchHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCceEEeCCCCCCC
Q 009604 362 GSGKL-VT-QIRNLHH---VLGGALNPNAA----YLIIRGMKTLHLRVQQQNSTALRMAKILEAH-PKVKRVHYPGLKSH 431 (531)
Q Consensus 362 ~~~~l-i~-~l~~~~~---~~G~~~s~~~a----~l~l~~L~tl~~r~~~~~~na~~La~~L~~~-p~v~~V~~pgl~s~ 431 (531)
.++.. ++ .+..-.+ ...++.+.... ..+....+.+....++..+.+.++.+.|.+. |.+. .-+ +
T Consensus 215 v~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~---~~g---~ 288 (386)
T COG1104 215 VRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVY---LNG---D 288 (386)
T ss_pred ECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEE---EcC---C
Confidence 65532 12 1111111 11122222211 1122344556666666667777788888765 5442 112 1
Q ss_pred chhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCC----CCe
Q 009604 432 PEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM----DNL 507 (531)
Q Consensus 432 p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~----~~l 507 (531)
+. ...++++.|.+++ .+.+.++-.|+..+|++|.|++||... ..+...+.++|++ .+.
T Consensus 289 ~~--------~rlP~~~~~~f~g--v~gE~ll~~L~~~gI~vStGSACsS~~--------~~pShVL~AmG~~~e~a~~s 350 (386)
T COG1104 289 DE--------PRLPNILNFSFPG--VEGESLLLALDLAGIAVSTGSACSSGS--------LEPSHVLRAMGISEELAHGS 350 (386)
T ss_pred cc--------cCCCCeEEEEeCC--CcHHHHHHhccccCeEEeccccccCCC--------CCccHHHHHcCCChHHhCcc
Confidence 11 1357899999987 567889999999999999999887432 2244677888885 378
Q ss_pred EEEEecCCCHHHHHHHHHHHHHh
Q 009604 508 VRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 508 IRlSvGlE~~edli~dL~~AL~~ 530 (531)
||||+|.+++++.++.+.++|.+
T Consensus 351 iR~S~g~~tt~eei~~~~~~l~~ 373 (386)
T COG1104 351 IRFSLGRFTTEEEIDAAAEALKE 373 (386)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999998888764
No 49
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.94 E-value=1.5e-24 Score=230.22 Aligned_cols=277 Identities=15% Similarity=0.162 Sum_probs=196.1
Q ss_pred CcEEEeCChHHHHHHHHHHh----ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC
Q 009604 216 ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN 286 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al----l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~ 286 (531)
+++++++|+++++.+++.++ +++||+|++++++|.+.+..+....+..|++++.++. .|+++++++++++
T Consensus 82 ~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~- 160 (401)
T PRK10874 82 KNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPR- 160 (401)
T ss_pred CEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcC-
Confidence 45666666679999999887 4799999999999998766665666778999888764 3789999999874
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
|++|++++|+||||.+.|+++|.++|+++|+++++|++++.+ ...+...+++|+++.|++|++|+.| .|+++.+++
T Consensus 161 t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G---~G~l~~~~~ 237 (401)
T PRK10874 161 TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTG---IGVLYGKSE 237 (401)
T ss_pred cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccccCCCc---cEEEEEchH
Confidence 999999999999999999999999999999999999998643 2334445689999999999888776 589999988
Q ss_pred HHHHHHHHhh---------------------hcCCCchHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHcCCC
Q 009604 366 LVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTLHL-----RVQQQNSTALRMAKILEAHPK 419 (531)
Q Consensus 366 li~~l~~~~~---------------------~~G~~~s~~~a~l~l~~L~tl~~-----r~~~~~~na~~La~~L~~~p~ 419 (531)
+++.+..+.. ...++.+......+..+++.+.. ..++..+.++++.+.|+++|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g 317 (401)
T PRK10874 238 LLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPG 317 (401)
T ss_pred HHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8776543210 00112222233333334443321 223344556777778877776
Q ss_pred ceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHH
Q 009604 420 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 499 (531)
Q Consensus 420 v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~ 499 (531)
+..+ .+. .+++++|.+++- ....+.+.|...++.++.|..++. ....
T Consensus 318 ~~~~-~~~----------------~~~i~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~~~~--------------~~~~ 364 (401)
T PRK10874 318 FRSF-RCQ----------------DSSLLAFDFAGV--HHSDLVTLLAEYGIALRAGQHCAQ--------------PLLA 364 (401)
T ss_pred EEEe-CCC----------------CCcEEEEEECCc--CHHHHHHHHHHCCcEEeccccchH--------------HHHH
Confidence 5422 111 246888888652 234566666666777777754421 1122
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 500 KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 500 ~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.+|. .+.||+|++..++++.++.|.++|++
T Consensus 365 ~~g~-~~~iRiS~~~~nt~edid~ll~al~~ 394 (401)
T PRK10874 365 ALGV-TGTLRASFAPYNTQSDVDALVNAVDR 394 (401)
T ss_pred HhCC-CCEEEEEecccCCHHHHHHHHHHHHH
Confidence 3443 47899999999999999988888864
No 50
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=2.8e-24 Score=227.78 Aligned_cols=280 Identities=21% Similarity=0.242 Sum_probs=204.4
Q ss_pred cEEEeCCh-HHHHHHHHHHh---ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCCCc
Q 009604 217 STVIMASG-MSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNV 287 (531)
Q Consensus 217 ~~i~~sSG-~~Ai~~al~al---l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~t 287 (531)
+.|+|+.| +++++++..++ +++||+||++..+|++....++.+.++.|+++++++.+ ++++++..+++ +|
T Consensus 85 ~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~-~T 163 (405)
T COG0520 85 DEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITP-KT 163 (405)
T ss_pred CeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCC-Cc
Confidence 45555555 59999999988 69999999999999998888877788889999988743 57999998988 49
Q ss_pred EEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChHH
Q 009604 288 SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 366 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l 366 (531)
|+|.+.+.+|.||.+.|+++|+++||++|++++||.+++.+. ..+..++|+|++++|.||++.|+.+ .|++++++++
T Consensus 164 klvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~G--iGvLy~r~~~ 241 (405)
T COG0520 164 KLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTG--IGVLYVRKEL 241 (405)
T ss_pred eEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCc--eEEEEEchHH
Confidence 999999999999999999999999999999999999988764 4666778999999999996666533 7999999999
Q ss_pred HHHHHHHhh----------------------hcCCCchHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcCCC
Q 009604 367 VTQIRNLHH----------------------VLGGALNPNAAYLIIRGMKTLH-----LRVQQQNSTALRMAKILEAHPK 419 (531)
Q Consensus 367 i~~l~~~~~----------------------~~G~~~s~~~a~l~l~~L~tl~-----~r~~~~~~na~~La~~L~~~p~ 419 (531)
++.+..... .-.++.+....+.+..+++.+. ...++..+..+++.+.|++.|.
T Consensus 242 l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~ 321 (405)
T COG0520 242 LEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPG 321 (405)
T ss_pred HhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 888732111 0112222222222222333321 2223334566777888888888
Q ss_pred ceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHH
Q 009604 420 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 499 (531)
Q Consensus 420 v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~ 499 (531)
++. +.|... ..+++++|.+++- ....+...|...+|++.-|..|.. |. ..
T Consensus 322 v~i-~g~~~~-------------~r~~~vsF~v~~~--~~~dv~~~L~~~gI~vr~g~~ca~---p~-----------~~ 371 (405)
T COG0520 322 VEI-YGPPDA-------------DRGGIVSFNVKGI--HPHDVATLLDEKGIAVRAGHHCAQ---PL-----------HR 371 (405)
T ss_pred eEE-ecCCcc-------------cCceEEEEEeCCC--CHHHHHHHHHhCCeEEEecccccc---HH-----------HH
Confidence 753 333210 1468999999873 233444445445688888866532 21 12
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 500 KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 500 ~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
..++ ++.+|+|++++++++.|+.|.++|++
T Consensus 372 ~~~~-~~~iR~S~~~YNt~edid~l~~aL~~ 401 (405)
T COG0520 372 LLGV-DATIRASLHLYNTEEDVDRLLEALKK 401 (405)
T ss_pred hcCC-CCceEEEEeecCCHHHHHHHHHHHHH
Confidence 2344 34599999999999999999999986
No 51
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.94 E-value=2.4e-24 Score=229.24 Aligned_cols=278 Identities=17% Similarity=0.175 Sum_probs=197.2
Q ss_pred CcEEEeCChHHHHHHHHHH----hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC
Q 009604 216 ESTVIMASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN 286 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~a----ll~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~ 286 (531)
+++++++++++++.+++.+ ++++||+|+++.++|++.+..+...++..|+++..++. .|+++|+++++++
T Consensus 86 ~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~- 164 (406)
T PRK09295 86 EELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDER- 164 (406)
T ss_pred CeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCC-
Confidence 4566666667999988876 46899999999999998876666666778999888763 3789999999874
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-ccccccCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
|++|++++|+||||.+.|+++|.++|+++|+++++|++++.+.. .+...+++|+++.|+||++|++| .|+++.+++
T Consensus 165 t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G---~G~l~~~~~ 241 (406)
T PRK09295 165 TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTG---IGILYVKEA 241 (406)
T ss_pred cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhccCCCC---cEEEEEchH
Confidence 99999999999999999999999999999999999999876532 33345789999999999888776 588888888
Q ss_pred HHHHHHHHhh----------------------hcCCCchHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcCC
Q 009604 366 LVTQIRNLHH----------------------VLGGALNPNAAYLIIRGMKTLH-----LRVQQQNSTALRMAKILEAHP 418 (531)
Q Consensus 366 li~~l~~~~~----------------------~~G~~~s~~~a~l~l~~L~tl~-----~r~~~~~~na~~La~~L~~~p 418 (531)
+++.+..... ...++.+....+.+..+++.+. ...++..+.+.++.+.|.+.+
T Consensus 242 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 321 (406)
T PRK09295 242 LLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVP 321 (406)
T ss_pred hHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7665432100 0112333333333333444332 222334455667777777776
Q ss_pred CceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHH
Q 009604 419 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 498 (531)
Q Consensus 419 ~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~ 498 (531)
+++ +.-|. ..+++++|.+++. ..+.+.+.|+..++.++.|..|.. + ..
T Consensus 322 ~~~-~~~~~---------------~~~~iv~~~~~~~--~~~~~~~~L~~~gI~v~~g~~c~~---~-----------~~ 369 (406)
T PRK09295 322 DLT-LYGPQ---------------NRLGVIAFNLGKH--HAYDVGSFLDNYGIAVRTGHHCAM---P-----------LM 369 (406)
T ss_pred CEE-EeCCC---------------CCceEEEEEECCc--CHHHHHHHHHhCCeEEeccccchH---H-----------HH
Confidence 653 32221 0247999998752 233455556667888888865531 1 12
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 499 LKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 499 ~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
..+|. ++.||+|++..++++.|+.|.++|+.
T Consensus 370 ~~~~~-~~~iRiS~~~ynt~~did~l~~~l~~ 400 (406)
T PRK09295 370 AYYNV-PAMCRASLAMYNTHEEVDRLVAGLQR 400 (406)
T ss_pred HHHCC-CCEEEEEccCCCCHHHHHHHHHHHHH
Confidence 23343 46899999999999999999999975
No 52
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.93 E-value=3.7e-24 Score=227.02 Aligned_cols=277 Identities=17% Similarity=0.177 Sum_probs=196.1
Q ss_pred CcEEEeCChHHHHHHHHHHh----ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC
Q 009604 216 ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN 286 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al----l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~ 286 (531)
+++++++++++++.+++.++ +++||+|+++.++|.+.+..+...++..|++++.++. .|+++|+++++++
T Consensus 79 ~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~- 157 (398)
T TIGR03392 79 ENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPR- 157 (398)
T ss_pred CeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccC-
Confidence 45667777779999999887 5899999999999988765555566778999888764 3789999999874
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
|++|++++|+||||.+.|+++|.++|+++|+++++|++++.+. ..+...+++|+++.|+||++++.| .|+++.+++
T Consensus 158 t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G---~G~l~~~~~ 234 (398)
T TIGR03392 158 TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTG---IGVLYGKTE 234 (398)
T ss_pred ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccCCCc---eEEEEEcHH
Confidence 9999999999999999999999999999999999999986542 233345689999999999888766 689989888
Q ss_pred HHHHHHHHhh---------------------hcCCCchHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCC
Q 009604 366 LVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEAHPK 419 (531)
Q Consensus 366 li~~l~~~~~---------------------~~G~~~s~~~a~l~l~~L~tl-----~~r~~~~~~na~~La~~L~~~p~ 419 (531)
+++.+..+.. .-.++.+......+..+++.+ ....++..+.++++.+.|++.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g 314 (398)
T TIGR03392 235 LLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPG 314 (398)
T ss_pred HHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8776543210 001122222222222333332 12223444566777777777776
Q ss_pred ceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHH
Q 009604 420 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 499 (531)
Q Consensus 420 v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~ 499 (531)
+.....| .+++++|.+++. ..+.+.+.|+..++.++.|..|+. ....
T Consensus 315 ~~~~~~~-----------------~~~i~~~~~~~~--~~~~l~~~L~~~gI~v~~g~~~~~--------------~~~~ 361 (398)
T TIGR03392 315 FRSFRCP-----------------GSSLLAFDFAGV--HHSDLAALLAESGIALRAGQHCAQ--------------PLMA 361 (398)
T ss_pred eEEeCCC-----------------CCcEEEEEeCCc--CHHHHHHHHHhCCEEEecCccchH--------------HHHH
Confidence 5421111 246899988652 234566677767888887765431 1112
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 500 KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 500 ~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.+|. ++.||+|++..++++.++.|.++|++
T Consensus 362 ~~g~-~~~iRvS~~~~~t~~ei~~l~~~l~~ 391 (398)
T TIGR03392 362 ALGV-SGTLRASFAPYNTQQDVDALVDAVGA 391 (398)
T ss_pred HhCC-CCEEEEEeeccCCHHHHHHHHHHHHH
Confidence 2343 47899999999998888888888864
No 53
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.93 E-value=1.6e-23 Score=224.22 Aligned_cols=283 Identities=18% Similarity=0.202 Sum_probs=198.5
Q ss_pred CcEEEeCChHHHHHHHHHH----hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC
Q 009604 216 ESTVIMASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN 286 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~a----ll~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~ 286 (531)
+++++++++++++.+++.+ .+++||+|+++.++|++.+..+....+..|+++.+++. .|++++++++++ +
T Consensus 95 ~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~-~ 173 (424)
T PLN02855 95 REIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSE-K 173 (424)
T ss_pred CEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhcc-C
Confidence 4577777777999998876 36899999999999998877776666778999888764 278999999987 5
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
|++|++++|+||||.+.|+++|.++|+++|+++++|++++.+. ..+...+++|+++.|+||++|+.| .|+++.+++
T Consensus 174 t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G---~G~l~~~~~ 250 (424)
T PLN02855 174 TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTG---IGFLWGKSD 250 (424)
T ss_pred ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccccCCCc---cEEEEEchh
Confidence 9999999999999999999999999999999999999987553 234445789999999999887666 688888888
Q ss_pred HHHHHHHHhh---------------------hcCCCchHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCC
Q 009604 366 LVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEAHPK 419 (531)
Q Consensus 366 li~~l~~~~~---------------------~~G~~~s~~~a~l~l~~L~tl-----~~r~~~~~~na~~La~~L~~~p~ 419 (531)
+++.+..+.. ...++.+....+.+..+++.+ ....++..+.++.+.+.|++.++
T Consensus 251 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g 330 (424)
T PLN02855 251 LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPG 330 (424)
T ss_pred hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7766542210 001122222222222333322 12223344556667777777776
Q ss_pred ceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-CcccccCCcccccccCccccccCCCHHHH
Q 009604 420 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQPAIMSYWDLSQSER 498 (531)
Q Consensus 420 v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~-~iavS~Gg~~Sli~~p~~~s~~~~~~~~~ 498 (531)
++ +.-|. .+.+. ..+++++|.+++ .....+.+.|... ++.++.|..|+. | ..
T Consensus 331 ~~-i~~~~-~~~~~---------~r~~~v~~~~~~--~~~~~v~~~L~~~~gI~v~~g~~c~~---~-----------~~ 383 (424)
T PLN02855 331 VR-IYGPK-PSEGV---------GRAALCAFNVEG--IHPTDLSTFLDQQHGVAIRSGHHCAQ---P-----------LH 383 (424)
T ss_pred EE-EeCCC-ccccc---------CcccEEEEEECC--cCHHHHHHHhcccCCEEEechhhhhH---H-----------HH
Confidence 64 33221 10010 136799999975 2345677777654 888887765531 1 11
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 499 LKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 499 ~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
..+|+ ++.||+|+++.++++.++.|.++|++
T Consensus 384 ~~~g~-~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 384 RYLGV-NASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred HHhCC-CCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 23454 47899999999999999999988864
No 54
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=4.5e-23 Score=218.36 Aligned_cols=264 Identities=19% Similarity=0.215 Sum_probs=184.2
Q ss_pred CCc-EEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhccCC
Q 009604 215 AES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNNN 285 (531)
Q Consensus 215 ~e~-~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--------~d~e~Le~al~~~ 285 (531)
+++ +++++++++|+..++.+++.|||+|++++|.|...... ....|.++..++. .|+++|++++++
T Consensus 88 ~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~----~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~- 162 (393)
T COG0436 88 PEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAA----VKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP- 162 (393)
T ss_pred CCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHH----HHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-
Confidence 344 66666666999999999999999999999999875533 3445777666652 168999999999
Q ss_pred CcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----ccccc----CCcEEEECCccccccCC
Q 009604 286 NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSL----GADLVLHSATKFIGGHN 353 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l~~----gaDivv~S~sK~lgg~g 353 (531)
+||+|++++||||||.+.+ +++|+++|++||++||.||+|...... ..+.. ..-++++|+||.++-.|
T Consensus 163 ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtG 242 (393)
T COG0436 163 KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTG 242 (393)
T ss_pred cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccc
Confidence 5999999999999999997 678889999999999999998653321 11222 12489999999999888
Q ss_pred CceEEEEEeC-hHHHHHHHHHhhhcCCCchHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 354 DVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 354 ~v~gG~iv~~-~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~------tl~~r~~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
.+ .||++++ +++++.+...+.....+.+....+.+..+|+ .+....+...++++.+.+.|.+.+++..+..|
T Consensus 243 wR-vG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p 321 (393)
T COG0436 243 WR-IGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPP 321 (393)
T ss_pred cc-eeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCC
Confidence 76 6788887 7888888766665554444443333333333 22233355678888899999988766544434
Q ss_pred CCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCC
Q 009604 427 GLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 505 (531)
Q Consensus 427 gl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~ 505 (531)
. .+..++..++.. .+...|...| +..++++..|..+.. ...+
T Consensus 322 ~----------------Ga~Y~~~~i~~~-~d~~~f~~~Ll~~~gV~v~PG~~Fg~--------------------~~g~ 364 (393)
T COG0436 322 E----------------GAFYLFPKIPEL-LDSEEFAKKLLEEAGVAVVPGSGFGE--------------------PPGE 364 (393)
T ss_pred C----------------eeEEEEeecCCC-CCHHHHHHHHHHhCCEEEecccccCC--------------------CCCC
Confidence 2 234566666542 2344555444 445678887755421 0236
Q ss_pred CeEEEEecCCCHHHHHH
Q 009604 506 NLVRFSFGVEDFEDLKA 522 (531)
Q Consensus 506 ~lIRlSvGlE~~edli~ 522 (531)
+.||||++..+ +++.+
T Consensus 365 ~~vRis~~~~~-~~l~~ 380 (393)
T COG0436 365 GYVRLSLATSE-ETLEE 380 (393)
T ss_pred CeEEEEEecCH-HHHHH
Confidence 89999999876 44333
No 55
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.92 E-value=4.9e-23 Score=218.57 Aligned_cols=281 Identities=21% Similarity=0.241 Sum_probs=197.6
Q ss_pred CcEEEeCChHHHHHHHHHHh----ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC
Q 009604 216 ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN 286 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al----l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~ 286 (531)
+++++++++++++.+++.++ +++||+|+++.+.|.+.+..++...+..|++++.++. .|+++++++++++
T Consensus 81 ~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~- 159 (403)
T TIGR01979 81 EEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEK- 159 (403)
T ss_pred CeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccC-
Confidence 45777777779999888764 6889999999999998776666666678999888764 3789999999874
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-ccccccCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
|++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. .+...+++|+++.|+||++|+.| .|+++.+++
T Consensus 160 ~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G---~g~l~~~~~ 236 (403)
T TIGR01979 160 TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTG---IGVLYGKEE 236 (403)
T ss_pred CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEecccccCCCC---ceEEEEchH
Confidence 99999999999999999999999999999999999999876533 34445689999999999988665 688888887
Q ss_pred HHHHHHHHhh---------------------hcCCCchHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCC
Q 009604 366 LVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEAHPK 419 (531)
Q Consensus 366 li~~l~~~~~---------------------~~G~~~s~~~a~l~l~~L~tl-----~~r~~~~~~na~~La~~L~~~p~ 419 (531)
+++.+..... ...++.+....+.+..+++.+ ....++..+.++.+.+.|++.++
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g 316 (403)
T TIGR01979 237 LLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPG 316 (403)
T ss_pred HHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7766532110 001122222222223333332 22344555666777777877766
Q ss_pred ceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHH
Q 009604 420 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 499 (531)
Q Consensus 420 v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~ 499 (531)
++ +..|.- +. ..++++.|.+++. ....+.+.|+..++.++.|..++. | ...
T Consensus 317 ~~-~~~~~~---~~---------~~~~~v~~~~~~~--~~~~~~~~L~~~gI~v~~g~~~~~---~-----------~~~ 367 (403)
T TIGR01979 317 LR-IYGPRD---AE---------DRGGIISFNVEGV--HPHDVGTILDEEGIAVRSGHHCAQ---P-----------LMR 367 (403)
T ss_pred EE-EeCCCC---cc---------ccCceEEEEeCCc--CHHHHHHHHhhCCEEEcchhhhhH---H-----------HHH
Confidence 53 333321 10 1367899998652 244567777777888887754421 1 112
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 500 KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 500 ~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.+|. ++.||||+|..++++.++.|.++|++
T Consensus 368 ~~~~-~~~iRiS~~~~~t~~di~~l~~~l~~ 397 (403)
T TIGR01979 368 RFGV-PATCRASFYIYNTEEDIDALVEALKK 397 (403)
T ss_pred HhCC-CCEEEEEeccCCCHHHHHHHHHHHHH
Confidence 2333 47899999998888888888888764
No 56
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=3.6e-23 Score=217.10 Aligned_cols=277 Identities=21% Similarity=0.252 Sum_probs=196.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcc---CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCCCc
Q 009604 216 ESTVIMASGMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNV 287 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~---pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~t 287 (531)
++++++++|++++.+++.++.. +||+|+++.+.|.+.+..+....+..|+++.+++.+ |+++|++++++ ++
T Consensus 62 ~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~ 140 (373)
T cd06453 62 DEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTE-RT 140 (373)
T ss_pred CeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcC-Cc
Confidence 4677788888999999999887 899999999999987655555556778888888643 78999999987 49
Q ss_pred EEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-ccccccCCcEEEECCccccccCCCceEEEEEeChHH
Q 009604 288 SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 366 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l 366 (531)
++|++++|+||+|.+.|+++|.++|+++|++|++|++++.+.. .....+|+|++++|++|++++.+ +|+++.++++
T Consensus 141 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g---~g~~~~~~~~ 217 (373)
T cd06453 141 KLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTG---IGVLYGKEEL 217 (373)
T ss_pred eEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCC---cEEEEEchHH
Confidence 9999999999999999999999999999999999999876543 23335689999999999999854 5888888888
Q ss_pred HHHHHHHhhh--------------------c-CCCchHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHcCCCc
Q 009604 367 VTQIRNLHHV--------------------L-GGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 367 i~~l~~~~~~--------------------~-G~~~s~~~a~l~l~~L~t-----l~~r~~~~~~na~~La~~L~~~p~v 420 (531)
++.++..... + .++.+......+..+++. +..+.++..+.++++.+.|++++.+
T Consensus 218 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~ 297 (373)
T cd06453 218 LEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGV 297 (373)
T ss_pred hhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 7766543210 0 012222222222223332 2334455567777888888887765
Q ss_pred eEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHh
Q 009604 421 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 500 (531)
Q Consensus 421 ~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~ 500 (531)
+.+ .+. ...++++.|.+++ ....++.+.|+..++.++.|+.+.. | ....
T Consensus 298 ~~~-~~~--------------~~~~~~~~~~~~~--~~~~~i~~~l~~~gi~i~~g~~~~~---~-----------~~~~ 346 (373)
T cd06453 298 RVY-GDA--------------EDRAGVVSFNLEG--IHPHDVATILDQYGIAVRAGHHCAQ---P-----------LMRR 346 (373)
T ss_pred EEe-CCc--------------cccCCeEEEEECC--cCHHHHHHHHHHCCEEeccCccchh---H-----------HHHH
Confidence 433 111 0135688998864 2345666777656766666643321 0 1112
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009604 501 YGIMDNLVRFSFGVEDFEDLKADVLQAL 528 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE~~edli~dL~~AL 528 (531)
+|. ++.||+|+|..++++.++.|.++|
T Consensus 347 ~~~-~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 347 LGV-PGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred hCC-CCeEEEEecCCCCHHHHHHHHhhC
Confidence 333 478999999999999999888764
No 57
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.92 E-value=9.4e-23 Score=215.91 Aligned_cols=269 Identities=16% Similarity=0.160 Sum_probs=183.6
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCcEEEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tklV~ 291 (531)
+.++++++++++..++.+++++||+|++++|+|..... .++..|+++..++. .|+++|++++++ ++|+|+
T Consensus 91 ~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~klv~ 165 (389)
T PRK05957 91 AIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM----AITMAGCQPILVPTDDNYQLQPEAIEQAITP-KTRAIV 165 (389)
T ss_pred eEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH----HHHhcCCEEEEeecCCCCCcCHHHHHHhcCc-CceEEE
Confidence 34444455589999999999999999999999977543 23456888877753 378999999987 499999
Q ss_pred EeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----ccc----ccCCcEEEECCccccccCCCceEEE
Q 009604 292 TESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL----SLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 292 lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l----~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+.+|+||||.+++ +++|+++|+++|++||+|++|...... .+. .....+++.|+||.++.+|.+ .|+
T Consensus 166 ~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlR-iG~ 244 (389)
T PRK05957 166 TISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWR-IGY 244 (389)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccce-eEE
Confidence 9999999999998 888999999999999999998643221 111 112348899999999877755 788
Q ss_pred EEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhh
Q 009604 360 ISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHH 435 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~ 435 (531)
+++++++++++.......+...+......+...++ .+....++..++++.+.+.|++++.+..+.-|.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~-------- 316 (389)
T PRK05957 245 MVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPAN-------- 316 (389)
T ss_pred EecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCC--------
Confidence 88899999998877655444444444444333343 244445556677777888888765432221111
Q ss_pred hhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009604 436 IATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 514 (531)
Q Consensus 436 l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl 514 (531)
.|.+++++++.+ .+..+|.+.| +..++.+..|..+.. -.++++|||+|.
T Consensus 317 --------gg~~~~~~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRis~~~ 366 (389)
T PRK05957 317 --------GAFYCFLKVNTD-LNDFELVKQLIREYRVAVIPGTTFGM---------------------KNGCYLRIAYGA 366 (389)
T ss_pred --------eeEEEEEeCCCC-CChHHHHHHHHHHCCEEEccchhhCC---------------------CCCCEEEEEEec
Confidence 345678888643 2345666666 345777777644310 014689999997
Q ss_pred CCHHHH---HHHHHHHHH
Q 009604 515 EDFEDL---KADVLQALH 529 (531)
Q Consensus 515 E~~edl---i~dL~~AL~ 529 (531)
.+.+++ ++.|.+.++
T Consensus 367 ~~~~~l~~~~~~l~~~~~ 384 (389)
T PRK05957 367 LQKATAKEGIERLVQGLK 384 (389)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 665544 444444444
No 58
>PRK07324 transaminase; Validated
Probab=99.92 E-value=9.1e-23 Score=214.93 Aligned_cols=262 Identities=16% Similarity=0.182 Sum_probs=177.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
++++++++++++|+.+++.+++++||+|+++.|.|.... ..++..|+++..++. .|++++++++++ ++
T Consensus 80 ~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~-~~ 154 (373)
T PRK07324 80 PENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLY----DIPESLGAEVDYWQLKEENGWLPDLDELRRLVRP-NT 154 (373)
T ss_pred hhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEecccccCCCCCHHHHHHhCCC-CC
Confidence 456766766779999999999999999999999997754 344556888777753 278999998887 49
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----cccc-cCCcEEEECCccccccCCCceEEE
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS-LGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~l~-~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... .... ....+++.|+||.++.+|.+ .|+
T Consensus 155 kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~R-iG~ 233 (373)
T PRK07324 155 KLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIR-VGW 233 (373)
T ss_pred cEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccce-eEE
Confidence 99999999999999998 888999999999999999998643221 1111 12348889999999877654 688
Q ss_pred EEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHH---HHHH-HHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhh
Q 009604 360 ISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLR-VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHH 435 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~t---l~~r-~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~ 435 (531)
+++++++++.++..+.....+.+....+++...++. +..+ .+...++.+.+.++|++++.+. +..|.
T Consensus 234 i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p~-------- 304 (373)
T PRK07324 234 IAANEEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVS-YVKPK-------- 304 (373)
T ss_pred EecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EECCC--------
Confidence 888889999888776543333344444444344432 2222 2334456777888888776553 22332
Q ss_pred hhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009604 436 IATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 514 (531)
Q Consensus 436 l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl 514 (531)
.|..+.+.++.+ ....+|.+.| +..++.+..|..+. .++.||||++.
T Consensus 305 --------gg~~~~i~~~~~-~~~~~~~~~ll~~~gv~v~pg~~F~-----------------------~~~~iRis~~~ 352 (373)
T PRK07324 305 --------AVSTSFVKLDVD-MPSEDFCLKLLKETGVLLVPGNRFD-----------------------LEGHVRIGYCC 352 (373)
T ss_pred --------ceEEEEEEeCCC-CCHHHHHHHHHHhcCEEEECccccC-----------------------CCCeEEEEecC
Confidence 234455555432 2345666664 44566666664321 14689999996
Q ss_pred CCHHHHHHHH
Q 009604 515 EDFEDLKADV 524 (531)
Q Consensus 515 E~~edli~dL 524 (531)
+ .+.+.+.|
T Consensus 353 ~-~~~l~~~l 361 (373)
T PRK07324 353 D-TETLKKGL 361 (373)
T ss_pred C-HHHHHHHH
Confidence 3 44443333
No 59
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.92 E-value=8.3e-23 Score=215.53 Aligned_cols=286 Identities=17% Similarity=0.179 Sum_probs=195.4
Q ss_pred CcEEEeCChHHHHHHHHHHhc-----cC-CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccC
Q 009604 216 ESTVIMASGMSASTVMLLALV-----PA-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNN 284 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all-----~p-GD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~ 284 (531)
+++++++++++++.+++.++. ++ ||+|+++..+|++....+ ..++..|+++..++.+ |+++|++++++
T Consensus 61 ~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~-~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~ 139 (382)
T TIGR03403 61 DDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATC-AFLESLGVEVTYLPINEQGTITAEQVREAITE 139 (382)
T ss_pred CeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHH-HHHHHCCCEEEEEecCCCCCCCHHHHHHhccc
Confidence 566677777799999988762 45 478999999998766554 3556789998888643 78999999987
Q ss_pred CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEEEEeC
Q 009604 285 NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS 363 (531)
Q Consensus 285 ~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~ 363 (531)
+ +++|++++|+||||.+.|+++|.++|+++|+++++|++++.+ ...+..++|+|+++.|+||++|++| .|+++.+
T Consensus 140 ~-t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G---~g~l~vr 215 (382)
T TIGR03403 140 K-TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKG---VGGLYIR 215 (382)
T ss_pred C-CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCc---eEEEEEC
Confidence 4 899999999999999999999999999999999999998765 3445566789999999999988777 4666655
Q ss_pred hHHH--HHHHH---HhhhcCCCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 364 GKLV--TQIRN---LHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 364 ~~li--~~l~~---~~~~~G~~~s~~~a~l~l~~L~t----l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
+++. ..+.. ......++.+....+.+..+++. ++...++..+.++++.+.|++.+++. +..|. .
T Consensus 216 ~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~--~---- 288 (382)
T TIGR03403 216 KGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVF-VVGDR--E---- 288 (382)
T ss_pred CCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEE-EECCC--C----
Confidence 4321 11100 00001122333332222333332 23333455566677777887777663 32221 0
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCC----CCeEEE
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM----DNLVRF 510 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~----~~lIRl 510 (531)
...++++.|.+++. ..+.++..|...+|.++.|..|+... .-+...+..+|.. .+.||+
T Consensus 289 -------~~~~~~~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~c~~~~--------~~~~~v~~~~g~~~~~~~~~iR~ 351 (382)
T TIGR03403 289 -------HRVPNTILISIKGV--EGEAMLWDLNKAGIAASTGSACASED--------LEANPVMVAIGADKELAHTAIRL 351 (382)
T ss_pred -------CCcCCEEEEEeCCC--CHHHHHHhhccCCEEEEchhccCCCC--------CCcCHHHHHcCCChHHhCeeEEE
Confidence 01356888888752 34456666777899999887664211 0012344555553 478999
Q ss_pred EecCCCHHHHHHHHHHHHHh
Q 009604 511 SFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 511 SvGlE~~edli~dL~~AL~~ 530 (531)
|++..++++.|+.+.++|++
T Consensus 352 s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 352 SLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred ECCCCCCHHHHHHHHHHHHH
Confidence 99999999999999988864
No 60
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.4e-22 Score=215.93 Aligned_cols=269 Identities=15% Similarity=0.182 Sum_probs=182.4
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----------CCHHHHHHhccCC
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----------ADMEGLEAALNNN 285 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----------~d~e~Le~al~~~ 285 (531)
+++++++++++++.+++.+++++||+|+++.|.|...... ++..|.++..++. .|+++|+++++++
T Consensus 103 ~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~----~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~ 178 (405)
T PRK06207 103 DELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKL----VEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAG 178 (405)
T ss_pred CCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhc
Confidence 4566666666999999999999999999999999875533 3445666655542 2789999998874
Q ss_pred CcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc----cc-cccc----CCcEEEECCccccccCC
Q 009604 286 NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QK-ALSL----GADLVLHSATKFIGGHN 353 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~----~~-~l~~----gaDivv~S~sK~lgg~g 353 (531)
+++|++++|+||||.+++ +++|+++|+++|++||+||+|..... .. ...+ ..-+++.|+||.++.+|
T Consensus 179 -~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpG 257 (405)
T PRK06207 179 -VRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSG 257 (405)
T ss_pred -CeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcc
Confidence 999999999999999997 66788889999999999999875321 11 1111 22389999999998665
Q ss_pred CceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCC
Q 009604 354 DVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 429 (531)
Q Consensus 354 ~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~ 429 (531)
. ..|++++++++++.+...........+.+....+...+ ..+..++++..+++..+.+.|++++++. +..|.
T Consensus 258 l-RiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~-- 333 (405)
T PRK06207 258 Y-RLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVF-VRAPQ-- 333 (405)
T ss_pred c-ceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCC--
Confidence 4 47889999999988887665544433333333333333 2355666667777778888887765442 22121
Q ss_pred CCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009604 430 SHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 508 (531)
Q Consensus 430 s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~-~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lI 508 (531)
.|..++++++........|.+.|. ..++.+..|..+.. ..++++
T Consensus 334 --------------gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~---------------------~~~~~~ 378 (405)
T PRK06207 334 --------------AGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSP---------------------HTADSI 378 (405)
T ss_pred --------------eeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCC---------------------CCCCeE
Confidence 366888888642123456777763 45777776644310 125789
Q ss_pred EEEecCCCHHHH---HHHHHHHHH
Q 009604 509 RFSFGVEDFEDL---KADVLQALH 529 (531)
Q Consensus 509 RlSvGlE~~edl---i~dL~~AL~ 529 (531)
|||++.+ .+++ ++.|.++|+
T Consensus 379 Ris~~~~-~~~l~~al~rl~~~l~ 401 (405)
T PRK06207 379 RLNFSQD-HAAAVAAAERIAQLIE 401 (405)
T ss_pred EEEecCC-HHHHHHHHHHHHHHHH
Confidence 9999973 3333 344444443
No 61
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.91 E-value=5.5e-23 Score=220.56 Aligned_cols=198 Identities=23% Similarity=0.314 Sum_probs=166.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCC---ccchHHHHHhhcccCCcEEEEeCC---CCHHHHHHhccCCCc
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC---YRKTRIFIETVLPKMGITATVIDP---ADMEGLEAALNNNNV 287 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~---y~~t~~~~~~~l~~~Gi~v~~vd~---~d~e~Le~al~~~~t 287 (531)
|++++++|+||++|+.+++. .+.+||+||+++.. |++++.+. ..++..|+++.+++. .++++++++++++ |
T Consensus 136 gae~alvv~sg~aAi~l~l~-~l~~GdeVIvs~~e~v~~ggs~~i~-~~~~~~G~~~~~v~~~~~~~l~dle~aI~~~-T 212 (454)
T TIGR00474 136 GAEDALVVNNNAAAVLLALN-TLAKGKEVIVSRGELVEIGGSFRIP-DVMEQSGAKLVEVGTTNRTHLKDYEDAITEN-T 212 (454)
T ss_pred CCCcEEEECCHHHHHHHHHH-HhCCcCEEEECCChhhhhcchhhHH-HHHHHcCCEEEEeCCCCCCCHHHHHHhcCcC-C
Confidence 88999999999999998885 46899999999876 56666553 456778999999976 5789999999885 9
Q ss_pred EEEEEeCCCCCC--C--cccCHHHHHHHHHhcCCEEEEeCCCC------------CCccccccccCCcEEEECCcccccc
Q 009604 288 SLFFTESPTNPF--L--RCVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLGADLVLHSATKFIGG 351 (531)
Q Consensus 288 klV~lesP~NPt--G--~v~dl~~I~~la~~~gi~lIvD~a~a------------~~~~~~~l~~gaDivv~S~sK~lgg 351 (531)
++|++++++|++ | .+.|+++|+++||++|+++++|++.+ .+..+++..+|+|++++|++|+++|
T Consensus 213 ~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgG 292 (454)
T TIGR00474 213 ALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGG 292 (454)
T ss_pred EEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCC
Confidence 999999999995 5 58899999999999999999999732 2233567789999999999999998
Q ss_pred CCCceEEEEEeChHHHHHHH----------------HHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009604 352 HNDVLAGSISGSGKLVTQIR----------------NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE 415 (531)
Q Consensus 352 ~g~v~gG~iv~~~~li~~l~----------------~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~ 415 (531)
+. +|+++++++++++++ .+...+|..+++..+|..++++++|..|++++++++++++++|+
T Consensus 293 p~---~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~ 369 (454)
T TIGR00474 293 PQ---AGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLK 369 (454)
T ss_pred Ce---EEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHH
Confidence 84 899999988775432 12335566778889999999999999999999999999999998
Q ss_pred cC
Q 009604 416 AH 417 (531)
Q Consensus 416 ~~ 417 (531)
+.
T Consensus 370 ~~ 371 (454)
T TIGR00474 370 AA 371 (454)
T ss_pred hh
Confidence 74
No 62
>PLN02651 cysteine desulfurase
Probab=99.91 E-value=1.7e-22 Score=211.94 Aligned_cols=278 Identities=17% Similarity=0.178 Sum_probs=189.9
Q ss_pred CcEEEeCChHHHHHHHHHHh----ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC
Q 009604 216 ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN 286 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al----l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~ 286 (531)
++++++++|++++++++.++ .++||+|+++...|++....+. .+...|++++.++. .|+++|+++++++
T Consensus 61 ~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~-~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~- 138 (364)
T PLN02651 61 KEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCR-HLQQEGFEVTYLPVKSDGLVDLDELAAAIRPD- 138 (364)
T ss_pred CeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHH-HHHhcCCEEEEEccCCCCcCCHHHHHHhcCCC-
Confidence 45777777789988877654 4789999999999988765554 34467888888764 3789999999884
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
+++|++++++|+||.+.|+++|.++||++|+++++|++++.+ ...+..++|+|+++.|.||+++++| .|+++.+++
T Consensus 139 t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G---~g~l~v~~~ 215 (364)
T PLN02651 139 TALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKG---VGALYVRRR 215 (364)
T ss_pred cEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCc---eEEEEEcCC
Confidence 999999999999999999999999999999999999998876 4466667899999999999876666 677777765
Q ss_pred HHHHHHHHhh-------hcCCCchHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHc-CCCceEEeCCCCCCCch
Q 009604 366 LVTQIRNLHH-------VLGGALNPNAAYLIIRGMKTLHLRV----QQQNSTALRMAKILEA-HPKVKRVHYPGLKSHPE 433 (531)
Q Consensus 366 li~~l~~~~~-------~~G~~~s~~~a~l~l~~L~tl~~r~----~~~~~na~~La~~L~~-~p~v~~V~~pgl~s~p~ 433 (531)
..+.+..... ...++.+....+.+..+++.+..-. ++..+..+++.+.|++ .++++ +..|.- +.
T Consensus 216 ~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~-i~~~~~---~~ 291 (364)
T PLN02651 216 PRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVR-VNGPRD---PE 291 (364)
T ss_pred CCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEE-EECCCC---cc
Confidence 5443322110 1122333333333344444443222 3334455566666654 45553 333311 11
Q ss_pred hhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCC----CCeEE
Q 009604 434 HHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM----DNLVR 509 (531)
Q Consensus 434 ~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~----~~lIR 509 (531)
....++++|.+++ ...+.+...|+. |.++.|..|+..... .......+|+. .+.||
T Consensus 292 --------~~~~~i~~~~~~~--~~~~~~~~~L~~--i~v~~g~~c~~~~~~--------~~~~~~~~g~~~~~~~~~vR 351 (364)
T PLN02651 292 --------KRYPGTLNLSFAY--VEGESLLMGLKE--VAVSSGSACTSASLE--------PSYVLRALGVPEEMAHGSLR 351 (364)
T ss_pred --------cCcCCEEEEEeCC--CCHHHHHHHhCC--EEEEchhhcCCCCCC--------cCHHHHHcCCChHHhCceEE
Confidence 0136799999975 234567777765 899999776532111 11234456654 47999
Q ss_pred EEecCCCHHHHHH
Q 009604 510 FSFGVEDFEDLKA 522 (531)
Q Consensus 510 lSvGlE~~edli~ 522 (531)
+|++..++++.|+
T Consensus 352 ~S~~~~~t~~did 364 (364)
T PLN02651 352 LGVGRFTTEEEVD 364 (364)
T ss_pred EEcCCCCCHHHcC
Confidence 9999999988764
No 63
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=3e-22 Score=210.99 Aligned_cols=284 Identities=17% Similarity=0.154 Sum_probs=194.1
Q ss_pred CcEEEeCChHHHHHHHHHHhc---cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCc
Q 009604 216 ESTVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNV 287 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all---~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~t 287 (531)
++++++++|++++.+++.+++ ++||+|+++..+|++....+. .++..|+++..++. .|+++++++++++ +
T Consensus 60 ~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~-~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~-~ 137 (379)
T TIGR03402 60 DEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQ-HLEKQGYKVTYLPVDEEGRLDLEELRAAITDD-T 137 (379)
T ss_pred CeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHH-HHHHcCCEEEEEccCCCCcCCHHHHHHhcCCC-c
Confidence 467788888899999888764 467899999999987665553 44557898888763 3789999999874 9
Q ss_pred EEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChHH
Q 009604 288 SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 366 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l 366 (531)
++|++++++||+|.+.|+++|.++|+++|+++++|++++.+. ..+...+++|+++.|.+|++++.| .|+++.+++.
T Consensus 138 ~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G---~g~l~v~~~~ 214 (379)
T TIGR03402 138 ALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKG---VGALYIRKGT 214 (379)
T ss_pred EEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCc---eEEEEECCCC
Confidence 999999999999999999999999999999999999987653 344456789999999999777666 5777766543
Q ss_pred HHHHHHHh-------hhcCCCchHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHc-CCCceEEeCCCCCCCchh
Q 009604 367 VTQIRNLH-------HVLGGALNPNAAYLIIRGMKTLHLRV----QQQNSTALRMAKILEA-HPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 367 i~~l~~~~-------~~~G~~~s~~~a~l~l~~L~tl~~r~----~~~~~na~~La~~L~~-~p~v~~V~~pgl~s~p~~ 434 (531)
. +.... ....++.+....+.+..+++.+...+ ++..+....+.+.|.+ .+.+.. .-+. .
T Consensus 215 ~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~-~~~~--~---- 285 (379)
T TIGR03402 215 R--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARL-NGDP--T---- 285 (379)
T ss_pred C--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEE-eCCC--c----
Confidence 1 11100 01112333222222233343332233 3444555666666664 565532 1111 0
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCC----CCeEEE
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM----DNLVRF 510 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~----~~lIRl 510 (531)
...+++++|.+++. ....+...|+..++.++.|..|+.-... +......+|.. ++.||+
T Consensus 286 -------~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~v~~g~~c~~~~~~--------~~~~~~~lg~~~~~~~~~vR~ 348 (379)
T TIGR03402 286 -------KRLPNTVNISFEYI--EGEAILLLLDMEGICASSGSACTSGSLE--------PSHVLRAMGVPHTAAHGSIRF 348 (379)
T ss_pred -------cCCCCEEEEEecCC--CHHHHHHhhccCCEEEEchhhcCCCCCC--------cCHHHHHcCCChhhcCceEEE
Confidence 01256888887642 3457788888889999988766532111 12334455653 478999
Q ss_pred EecCCCHHHHHHHHHHHHHh
Q 009604 511 SFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 511 SvGlE~~edli~dL~~AL~~ 530 (531)
|+|..++++.|+.+.++|++
T Consensus 349 S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 349 SLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred EcCCCCCHHHHHHHHHHHHH
Confidence 99999999999988888864
No 64
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.91 E-value=3.1e-22 Score=212.62 Aligned_cols=252 Identities=13% Similarity=0.107 Sum_probs=171.2
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-------CHHHHHHhccCCCcEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------DMEGLEAALNNNNVSL 289 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-------d~e~Le~al~~~~tkl 289 (531)
++++++++++++.+++.+++++||+|+++.|+|..... .++..|+++..++.+ |++++++++++ ++++
T Consensus 95 ~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~ 169 (399)
T PRK07681 95 EVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYET----GIQMAGATSYYMPLKKENDFLPDLELIPEEIAD-KAKM 169 (399)
T ss_pred eEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHH----HHHhcCCEEEEEecCCCCCCcCCHHHHHHhccc-cceE
Confidence 44444444599999999999999999999999987553 345568887776532 68889888876 4999
Q ss_pred EEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----cccc----cCCcEEEECCccccccCCCceE
Q 009604 290 FFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS----LGADLVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 290 V~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l~----~gaDivv~S~sK~lgg~g~v~g 357 (531)
|++++|+||||.+++ +++|+++|+++|++||+|++|...... .... ....+++.|+||.++.+|. ..
T Consensus 170 v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-Ri 248 (399)
T PRK07681 170 MILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGS-RI 248 (399)
T ss_pred EEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccc-ee
Confidence 999999999999998 667888899999999999998743211 1111 1235889999999986764 47
Q ss_pred EEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCch
Q 009604 358 GSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 433 (531)
Q Consensus 358 G~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~ 433 (531)
|++++++++++.+...........+......+...++ .+....+...++...+.+.|+++ ++ .+..|.
T Consensus 249 G~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~p~------ 320 (399)
T PRK07681 249 GYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GW-NVDKPA------ 320 (399)
T ss_pred EEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CC-cccCCC------
Confidence 8888999999988776654443444433333333332 33333444556677788888875 33 222221
Q ss_pred hhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe
Q 009604 434 HHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF 512 (531)
Q Consensus 434 ~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~-~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSv 512 (531)
.|..+++.++.+ ....+|.+.|.. .++.+..|..+.. -.+++|||++
T Consensus 321 ----------~g~f~~~~l~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRis~ 368 (399)
T PRK07681 321 ----------GSMFVWAEIPKG-WTSLSFAYALMDRANVVVTPGHAFGP---------------------HGEGFVRIAL 368 (399)
T ss_pred ----------eeeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCChhhCc---------------------CCCCeEEEEe
Confidence 366788888643 233456655533 5666666643210 0247899999
Q ss_pred cC
Q 009604 513 GV 514 (531)
Q Consensus 513 Gl 514 (531)
+.
T Consensus 369 ~~ 370 (399)
T PRK07681 369 VQ 370 (399)
T ss_pred cC
Confidence 94
No 65
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.91 E-value=3.4e-22 Score=209.82 Aligned_cols=284 Identities=20% Similarity=0.252 Sum_probs=196.6
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCcEEE
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tklV 290 (531)
++++++++|++++.+++.+++++||+|+++.+.|.++...+....+..|+++..++. .|+++|++++++ ++++|
T Consensus 63 ~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~-~~~~v 141 (376)
T TIGR01977 63 AHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKT-NTKLI 141 (376)
T ss_pred CeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCC-CCeEE
Confidence 356777788899999999999999999999999988776665566667888887764 378999999987 49999
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-ccccccCCcEEEECCccccccCCCceEEEEEeChHHHHH
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ 369 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~ 369 (531)
++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....|+|+++.|++|+++++.+. |++++.++..+..
T Consensus 142 ~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~-g~l~~~~~~~~~~ 220 (376)
T TIGR01977 142 VVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGT-GGLYIREGIKLKP 220 (376)
T ss_pred EEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCc-eEEEEcCCcCcCc
Confidence 9999999999999999999999999999999999876533 3444578999999999998876432 4454444432111
Q ss_pred HHHH-----------------hhhcCCCchHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCCceEEeCCC
Q 009604 370 IRNL-----------------HHVLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEAHPKVKRVHYPG 427 (531)
Q Consensus 370 l~~~-----------------~~~~G~~~s~~~a~l~l~~L~tl-----~~r~~~~~~na~~La~~L~~~p~v~~V~~pg 427 (531)
+... +...| +.+....+.+..+++.+ ....++..+.++++.+.|.+.+++. +..|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~r~~~~-t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~-~~~~~ 298 (376)
T TIGR01977 221 LKSGGTGSHSALIDQPSELPDRFESG-TLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVK-IYGPA 298 (376)
T ss_pred eecCCCccccccccccccchhhccCC-CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeE-EeCCC
Confidence 1100 00111 22222222223334333 2234455677788888888777653 33221
Q ss_pred CCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-CcccccCCcccccccCccccccCCCHHHHHhcC-CCC
Q 009604 428 LKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG-IMD 505 (531)
Q Consensus 428 l~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~-~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~g-i~~ 505 (531)
- +. ..+++++|.+++ .....+.+.|... ++.++.|..++...++ .+| ..+
T Consensus 299 ~---~~---------~~~~~v~~~~~~--~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~--------------~~g~~~~ 350 (376)
T TIGR01977 299 D---PA---------NRVGVVSFTVEG--IDSEEVADILDEKFDIATRTGLHCAPLAHK--------------TIGTFAT 350 (376)
T ss_pred C---cc---------ccCCeEEEEECC--CCHHHHHHHHhccCCEEEEcccccchHHHH--------------HhCCCCC
Confidence 1 11 135689999865 2345677777654 7788777655432211 122 235
Q ss_pred CeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 506 NLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 506 ~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
+.||+|++..++++.++.+.++|+.+
T Consensus 351 ~~iRis~~~~~t~~dv~~~~~~l~~~ 376 (376)
T TIGR01977 351 GTIRLSLGYFNTEEEIEKLLEALSEI 376 (376)
T ss_pred CeEEEecCCCCCHHHHHHHHHHHhhC
Confidence 78999999999999999999999764
No 66
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.91 E-value=6.1e-22 Score=209.66 Aligned_cols=278 Identities=19% Similarity=0.177 Sum_probs=187.5
Q ss_pred cEEEeCChHHHHHHHHHHh---ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC------CHHHHHHhccCCCc
Q 009604 217 STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA------DMEGLEAALNNNNV 287 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~al---l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~------d~e~Le~al~~~~t 287 (531)
.+++++++++++.+++.++ +++||+|+++++.|.+.+..+...++..|+++.+++.+ |+++++++++++ |
T Consensus 79 ~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~-~ 157 (397)
T TIGR01976 79 EVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPR-T 157 (397)
T ss_pred eEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCC-c
Confidence 4566666668887776665 68999999999999888766655667789988877542 689999999874 9
Q ss_pred EEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChHH
Q 009604 288 SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 366 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l 366 (531)
++|++++|+||+|.+.|+++|.++|+++|+++++|+++..+. ..+..++++|+++.|+||++|+. .|++++++++
T Consensus 158 ~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~----~G~l~~~~~~ 233 (397)
T TIGR01976 158 RLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGPH----MGILWGRPEL 233 (397)
T ss_pred eEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcCCc----eEEEEEcHHH
Confidence 999999999999999999999999999999999999976442 23444578999999999998642 6888888888
Q ss_pred HHHHHHHhhh----------cCCCchHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHcC
Q 009604 367 VTQIRNLHHV----------LGGALNPNAAYLIIRGMKTLH-------------------LRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 367 i~~l~~~~~~----------~G~~~s~~~a~l~l~~L~tl~-------------------~r~~~~~~na~~La~~L~~~ 417 (531)
++.+...... ..++.+....+.+..+++.+. ...++..+.++++.+.|++.
T Consensus 234 ~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~ 313 (397)
T TIGR01976 234 LMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDL 313 (397)
T ss_pred HhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7766532211 112222222222222333221 11222334555666666665
Q ss_pred CCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHH
Q 009604 418 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 497 (531)
Q Consensus 418 p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~ 497 (531)
+.++ +..+. .+. ..++++.|.+++ .....+.+.|+..++.++.|..+.. ..
T Consensus 314 ~~~~-~~~~~---~~~---------~~~~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~~~~~~--------------~~ 364 (397)
T TIGR01976 314 PGVT-LYGVA---RLA---------ARVPTVSFTVHG--LPPQRVVRRLADQGIDAWAGHFYAV--------------RL 364 (397)
T ss_pred CCEE-EeCCC---Ccc---------CCCceEEEEeCC--cCHHHHHHHHHHCCeEEEeCccchH--------------HH
Confidence 5543 32221 000 135688888864 2345677777766777776644321 01
Q ss_pred HHhcCCC--CCeEEEEecCCCHHHHHHHHHHHH
Q 009604 498 RLKYGIM--DNLVRFSFGVEDFEDLKADVLQAL 528 (531)
Q Consensus 498 ~~~~gi~--~~lIRlSvGlE~~edli~dL~~AL 528 (531)
....++. ++.||||++..++++.++.|.++|
T Consensus 365 ~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 365 LRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 1223332 468999999999999898888764
No 67
>PRK07179 hypothetical protein; Provisional
Probab=99.91 E-value=7.7e-22 Score=210.11 Aligned_cols=268 Identities=15% Similarity=0.159 Sum_probs=190.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEe
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTE 293 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~le 293 (531)
|.+++++++||++|+.+++.++..+||+|+++...|.+.... ++..|+++..++..|+++|+++++++++++|+++
T Consensus 113 g~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~ 188 (407)
T PRK07179 113 GFESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEG----VRAAGAQAHPFRHNDVDHLRRQIERHGPGIIVVD 188 (407)
T ss_pred CCCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHH----HHHCCCeEEEecCCCHHHHHHHHHhcCCeEEEEC
Confidence 677899999999999999999999999999998888776533 3345777777777899999999976348999999
Q ss_pred CCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-------ccccc--cCCcEEEECCccccccCCCceEEEEEeCh
Q 009604 294 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------QKALS--LGADLVLHSATKFIGGHNDVLAGSISGSG 364 (531)
Q Consensus 294 sP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-------~~~l~--~gaDivv~S~sK~lgg~g~v~gG~iv~~~ 364 (531)
+|+||+|.+.|+++|.++|+++|++||+|++|+.+.. ..... .++|+++.|++|.+++. +|++++++
T Consensus 189 ~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~----~G~l~~~~ 264 (407)
T PRK07179 189 SVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGR----AGIITCPR 264 (407)
T ss_pred CCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhcc----CeEEEeCH
Confidence 9999999999999999999999999999999864321 11111 24699999999999864 68899998
Q ss_pred HHHHHHHHHhh--hcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhh
Q 009604 365 KLVTQIRNLHH--VLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQ 439 (531)
Q Consensus 365 ~li~~l~~~~~--~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~ 439 (531)
++++.+..... .++++..+..+..+...++ ....+.++..++.+++.+.|++. ++. +.
T Consensus 265 ~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~--------------- 327 (407)
T PRK07179 265 ELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL-GYN-IR--------------- 327 (407)
T ss_pred HHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC-CC---------------
Confidence 88777654332 3455555544333333333 33445667778888888888764 221 11
Q ss_pred hcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009604 440 QMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 519 (531)
Q Consensus 440 ~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~ed 519 (531)
+.++++.|.++. ......+.+.|...++.++ .++.|... ..++.||||++..++++
T Consensus 328 ---~~~~i~~l~~~~-~~~~~~~~~~L~~~GI~~~------~~~~p~~~--------------~~~~~lRis~~~~~t~e 383 (407)
T PRK07179 328 ---SESQIIALETGS-ERNTEVLRDALEERNVFGA------VFCAPATP--------------KNRNLIRLSLNADLTAS 383 (407)
T ss_pred ---CCCCEEEEEeCC-HHHHHHHHHHHHHCCceEe------eecCCCCC--------------CCCceEEEEECCCCCHH
Confidence 135788888753 2345666667755454321 11222210 12478999999988887
Q ss_pred HHHHHHHHHHh
Q 009604 520 LKADVLQALHA 530 (531)
Q Consensus 520 li~dL~~AL~~ 530 (531)
.++.+.++|++
T Consensus 384 di~~~~~~l~~ 394 (407)
T PRK07179 384 DLDRVLEVCRE 394 (407)
T ss_pred HHHHHHHHHHH
Confidence 78777777753
No 68
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.90 E-value=7.5e-22 Score=207.73 Aligned_cols=235 Identities=15% Similarity=0.182 Sum_probs=166.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-------CHHHHHHhccC--
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------DMEGLEAALNN-- 284 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-------d~e~Le~al~~-- 284 (531)
|.+.++++++|++++..++.+++++||+|+++.+.|.+.+. .++..|+++..++.. |+++|++++++
T Consensus 65 g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 140 (370)
T TIGR02539 65 GMDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYV----AAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVE 140 (370)
T ss_pred CCCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHH----HHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhh
Confidence 56778889999999999999999999999999999877653 345668888887754 89999999863
Q ss_pred ----CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEE
Q 009604 285 ----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 285 ----~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
.++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. .......++|+++.|+||++++.+. .|+
T Consensus 141 ~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~--~G~ 218 (370)
T TIGR02539 141 DESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGP--CGV 218 (370)
T ss_pred hccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCC--EEE
Confidence 148999999999999999999999999999999999999998763 2344456799999999999986543 689
Q ss_pred EEeChHHHHHHHHHhhhc--------CCCchHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHcCCCceEE-eCCC
Q 009604 360 ISGSGKLVTQIRNLHHVL--------GGALNPNAAYLIIRGMKTLHLR---VQQQNSTALRMAKILEAHPKVKRV-HYPG 427 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~~--------G~~~s~~~a~l~l~~L~tl~~r---~~~~~~na~~La~~L~~~p~v~~V-~~pg 427 (531)
+++++++++.++.....+ +.+.....+..+...++....+ +.+..++++++.+.|++.. +..+ .+|.
T Consensus 219 l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~s 297 (370)
T TIGR02539 219 LGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDIG-FIQLGQKPK 297 (370)
T ss_pred EEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-cEEEccCCC
Confidence 999999998887644321 1111111222222334332222 3344556678888888763 3221 1121
Q ss_pred CCCCchhhhhhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcCCCCc
Q 009604 428 LKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPYI 471 (531)
Q Consensus 428 l~s~p~~~l~~~~~~g~g~ivsf~l~g~-------~~~~~~fl~~L~~~~i 471 (531)
..+++.|.+++. ......+.+.|...++
T Consensus 298 ----------------~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI 332 (370)
T TIGR02539 298 ----------------EHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGI 332 (370)
T ss_pred ----------------cCceEEEECCchhHHhhhhccccHHHHHHHHhCCC
Confidence 356787877531 1123457777765554
No 69
>PRK02948 cysteine desulfurase; Provisional
Probab=99.90 E-value=6.5e-22 Score=208.54 Aligned_cols=287 Identities=17% Similarity=0.192 Sum_probs=192.9
Q ss_pred CcEEEeCChHHHHHHHHHHhc----cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC
Q 009604 216 ESTVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN 286 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all----~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~ 286 (531)
+++++++++++++..++.+++ ++||+|+++..+|++....+ ..++..|+++..++. .|+++|+++++++
T Consensus 61 ~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~-~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~- 138 (381)
T PRK02948 61 QGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYF-QSLESQGYTVTEIPVDKSGLIRLVDLERAITPD- 138 (381)
T ss_pred CeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHH-HHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCC-
Confidence 345555555799988887775 57999999998988766555 355667888877753 3789999999874
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
+++|++++|+||||.+.|+++|.++|+++|+++++|+++..+ ...+...+++|+++.|+||++|++| .|+++.+++
T Consensus 139 ~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G---~G~l~~~~~ 215 (381)
T PRK02948 139 TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKG---VGAVYINPQ 215 (381)
T ss_pred CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCc---EEEEEEcCC
Confidence 899999999999999999999999999999999999886543 2334456789999999999998777 577776665
Q ss_pred H-HHHHHH----HhhhcCCCchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhh
Q 009604 366 L-VTQIRN----LHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHI 436 (531)
Q Consensus 366 l-i~~l~~----~~~~~G~~~s~~~a~l~l~~L----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l 436 (531)
+ +..+.. ......++.+......+..++ +.+..+.++..++++++.+.|++.+ +. +...+ .+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~-v~~~~---~~~~-- 288 (381)
T PRK02948 216 VRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLP-LP-IEVEG---HSTS-- 288 (381)
T ss_pred CCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CC-EEEeC---CCcc--
Confidence 3 111110 000112233333333223333 3344555666677888888887763 21 21111 1111
Q ss_pred hhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCC----CCCeEEEEe
Q 009604 437 ATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGI----MDNLVRFSF 512 (531)
Q Consensus 437 ~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi----~~~lIRlSv 512 (531)
..+.+++|.+++- ..+++...|+..++.++.|..|+...++ +...+..+|. .++.||||+
T Consensus 289 ------~~~~i~~~~~~~~--~~~~~~~~l~~~gI~v~~g~~c~~~~~~--------p~~~~~~~~~~~~~~~~~lRis~ 352 (381)
T PRK02948 289 ------CLPHIIGVTIKGI--EGQYTMLECNRRGIAISTGSACQVGKQE--------PSKTMLAIGKTYEEAKQFVRFSF 352 (381)
T ss_pred ------CcCCEEEEEeCCC--CHHHHHHhcccCCEEEEchHhcCCCCCC--------CCHHHHHcCCChHHhCceEEEEc
Confidence 1356888888752 2455667777778999988765431111 1122333443 247899999
Q ss_pred cCCCHHHHHHHHHHHHHh
Q 009604 513 GVEDFEDLKADVLQALHA 530 (531)
Q Consensus 513 GlE~~edli~dL~~AL~~ 530 (531)
|..++++.++.|.++|++
T Consensus 353 ~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 353 GQQTTKDQIDTTIHALET 370 (381)
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 999999999999888864
No 70
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.90 E-value=1.7e-21 Score=206.67 Aligned_cols=282 Identities=13% Similarity=0.098 Sum_probs=190.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHH---hccC------
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEA---ALNN------ 284 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~---al~~------ 284 (531)
|.+++++++||+.|+..++.+++++||+|+++++.|+++...+ .+. +.++.+++..|++++++ .+++
T Consensus 57 g~e~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~--~l~--~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~ 132 (392)
T PLN03227 57 GTESAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGV--SLS--RANVRWFRHNDMKDLRRVLEQVRAQDVALK 132 (392)
T ss_pred CCCcEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH--HHc--CCeEEEeCCCCHHHHHHHHHHhhhhccccc
Confidence 7889999999999999999999999999999999999876543 122 35666667666655554 3321
Q ss_pred ----CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc------------cccccCCcEEEECCccc
Q 009604 285 ----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------------KALSLGADLVLHSATKF 348 (531)
Q Consensus 285 ----~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~------------~~l~~gaDivv~S~sK~ 348 (531)
.++++|++|+|.||+|.+.|+++|.++|+++|+++|+||+++.+... .| ..++|+++.|++|+
T Consensus 133 ~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p-~~~~Div~~slsk~ 211 (392)
T PLN03227 133 RKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKP-MVHAEIVTFSLENA 211 (392)
T ss_pred cccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCC-CCCceEEEeechhh
Confidence 14899999999999999999999999999999999999998744321 12 23679999999999
Q ss_pred cccCCCceEEEEEeChHHHHHHHHH--hhhcCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHc--CCCce
Q 009604 349 IGGHNDVLAGSISGSGKLVTQIRNL--HHVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEA--HPKVK 421 (531)
Q Consensus 349 lgg~g~v~gG~iv~~~~li~~l~~~--~~~~G~~~s~~~a~l~l~~L~tl---~~r~~~~~~na~~La~~L~~--~p~v~ 421 (531)
+++. +|++++++++++.++.. ...+++.++|..++.++..++.+ ..++++..++.+++.+.|++ +|.+.
T Consensus 212 ~g~~----gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~ 287 (392)
T PLN03227 212 FGSV----GGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYAL 287 (392)
T ss_pred hhcc----CcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 8744 68888898887766532 23456666676666555455432 35667777888888888874 22222
Q ss_pred EEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHH--------HHHHHHHHcCCCCcccccCCcccccccCccccccCC
Q 009604 422 RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT--------ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 493 (531)
Q Consensus 422 ~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~--------~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~ 493 (531)
.+.- ++.-. ....++|+.|++.+... ...++.+.+...++.+..-+.......|
T Consensus 288 ~~rg-~~~~~---------~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~-------- 349 (392)
T PLN03227 288 KLRN-RLVIT---------SDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQ-------- 349 (392)
T ss_pred cccc-ccccC---------CCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCC--------
Confidence 2211 11000 01247899999954211 1246666665444433211111111011
Q ss_pred CHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 494 SQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 494 ~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
-+++..||+++...++++.++.+.++|++
T Consensus 350 --------~~P~~~iR~~~~~~~t~eei~~~~~~l~~ 378 (392)
T PLN03227 350 --------LVPPPCLRVVANASHTREDIDKLLTVLGE 378 (392)
T ss_pred --------CCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 12356799999998888877777776653
No 71
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1e-21 Score=209.50 Aligned_cols=267 Identities=16% Similarity=0.151 Sum_probs=178.5
Q ss_pred CcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-------CHHHHHHhccCCCc
Q 009604 216 ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------DMEGLEAALNNNNV 287 (531)
Q Consensus 216 e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-------d~e~Le~al~~~~t 287 (531)
++.|++++|+ +++..++.+++++||+|+++.|.|..... .++..|.++..++.+ |++++++++++ ++
T Consensus 106 ~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~-~~ 180 (410)
T PRK06290 106 VTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGT----HTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE-KA 180 (410)
T ss_pred cceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHH----HHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc-cc
Confidence 3356667776 99999999999999999999999987553 344567777766532 68889888876 49
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----ccc----ccCCcEEEECCccccccCCCce
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL----SLGADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~l----~~gaDivv~S~sK~lgg~g~v~ 356 (531)
|+|++++|+||||.+++ +++|.++|+++|++||+||+|...... ... ..+.++++.|+||.++..|.+
T Consensus 181 k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlR- 259 (410)
T PRK06290 181 KLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWR- 259 (410)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhh-
Confidence 99999999999999998 567888899999999999998753211 111 123569999999999877644
Q ss_pred EEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCch
Q 009604 357 AGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 433 (531)
Q Consensus 357 gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~ 433 (531)
.|++++++++++.+...........+.....++...++ .+....++..++++.+.+.|+++ ++. +..|.
T Consensus 260 iG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~------ 331 (410)
T PRK06290 260 LAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFK-AEMPG------ 331 (410)
T ss_pred eEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCC------
Confidence 78888999998888766554443332222222233332 23334455567777888888875 332 21111
Q ss_pred hhhhhhhcCCcccEEEEEEcCCH------HHHHHHHHHcCCCC-cccccCCcccccccCccccccCCCHHHHHhcCCCCC
Q 009604 434 HHIATQQMTGFGGVVSFEVDGDL------TATIKFIDALKIPY-IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDN 506 (531)
Q Consensus 434 ~~l~~~~~~g~g~ivsf~l~g~~------~~~~~fl~~L~~~~-iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~ 506 (531)
.|-++++.++... ....+|.+.|...+ +.+- |... .++
T Consensus 332 ----------g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~----------p~~~---------------~~~ 376 (410)
T PRK06290 332 ----------GTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTV----------PWDD---------------AGH 376 (410)
T ss_pred ----------eeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEE----------CCcc---------------ccC
Confidence 2335567776421 23456666664322 1111 2100 136
Q ss_pred eEEEEec-----CCCHHHHHHHHHHHHHhC
Q 009604 507 LVRFSFG-----VEDFEDLKADVLQALHAI 531 (531)
Q Consensus 507 lIRlSvG-----lE~~edli~dL~~AL~~i 531 (531)
++||+++ .|+.+.+++.|.++|..+
T Consensus 377 ~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 377 FLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred eEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 8999998 355678889999888753
No 72
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.90 E-value=8.6e-22 Score=208.52 Aligned_cols=202 Identities=14% Similarity=0.194 Sum_probs=156.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCC-
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNN- 285 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~- 285 (531)
|.++++++++|++++.+++.+++++||+|+++.+.|.+.+.. ++..|+++.+++. .|++++++++++.
T Consensus 77 g~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 152 (387)
T PRK09331 77 GMDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVA----AERAGLNVREVPKTGYPEYKITPEAYAEKIEEVK 152 (387)
T ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH----HHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhh
Confidence 778899999999999999999999999999999999887643 3456888888765 3789999988631
Q ss_pred -----CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEE
Q 009604 286 -----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 286 -----~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
++++|++++|+|++|.+.|+++|.++||++|+++++|++++.+. ..+...+|+|+++.|+||++++++. +|+
T Consensus 153 ~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~--~G~ 230 (387)
T PRK09331 153 EETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAP--SGV 230 (387)
T ss_pred hccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCC--EEE
Confidence 48999999999999999999999999999999999999998763 3455567899999999999986542 689
Q ss_pred EEeChHHHHHHHHHhh--------hcCCCchHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCce
Q 009604 360 ISGSGKLVTQIRNLHH--------VLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPKVK 421 (531)
Q Consensus 360 iv~~~~li~~l~~~~~--------~~G~~~s~~~a~l~l~~L~t---l~~r~~~~~~na~~La~~L~~~p~v~ 421 (531)
+++++++++.++.... .+|.++.+..++.++.+++. ...+++++.++++++.+.|++.++++
T Consensus 231 l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~ 303 (387)
T PRK09331 231 LATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFK 303 (387)
T ss_pred EEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 9999988877654322 13333332222322333333 23455666788889999999887664
No 73
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.5e-21 Score=206.56 Aligned_cols=269 Identities=16% Similarity=0.171 Sum_probs=183.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-------CHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------DMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-------d~e~Le~al~~~~t 287 (531)
++++++++++++|+..++.+++++||+|+++.++|..... .++..|+++..++.+ |++++++++++ ++
T Consensus 91 ~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~ 165 (393)
T PRK05764 91 PSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPE----MVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP-KT 165 (393)
T ss_pred HHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc-cc
Confidence 4567777777899999999999999999999999987543 345568888777642 57899999976 49
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----cc-----cccCCcEEEECCccccccCCC
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KA-----LSLGADLVLHSATKFIGGHND 354 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~-----l~~gaDivv~S~sK~lgg~g~ 354 (531)
++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .. ...+.++++.|+||.++.+|.
T Consensus 166 ~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~ 245 (393)
T PRK05764 166 KALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGW 245 (393)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccc
Confidence 99999999999999975 778899999999999999998653221 01 112467999999999987764
Q ss_pred ceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCC
Q 009604 355 VLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 430 (531)
Q Consensus 355 v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s 430 (531)
..|++++++++++.++......+...++...+.+.+.++ .+....++..+++..+.+.|++++++. +..|.
T Consensus 246 -RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~--- 320 (393)
T PRK05764 246 -RLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLE-CPKPE--- 320 (393)
T ss_pred -eeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCc-ccCCC---
Confidence 468888999999988876655555556665555555543 233334445566777888888775542 11111
Q ss_pred CchhhhhhhhcCCcccEEEEEEcCCHH----HHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCC
Q 009604 431 HPEHHIATQQMTGFGGVVSFEVDGDLT----ATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 505 (531)
Q Consensus 431 ~p~~~l~~~~~~g~g~ivsf~l~g~~~----~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~ 505 (531)
.|.++++.++.... ...++.+.+ +..++.+..|..+. . +
T Consensus 321 -------------g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~----------------------~-~ 364 (393)
T PRK05764 321 -------------GAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG----------------------A-P 364 (393)
T ss_pred -------------cceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccC----------------------C-C
Confidence 23466777754211 124555554 44566666553321 1 4
Q ss_pred CeEEEEecCC--CHHHHHHHHHHHHH
Q 009604 506 NLVRFSFGVE--DFEDLKADVLQALH 529 (531)
Q Consensus 506 ~lIRlSvGlE--~~edli~dL~~AL~ 529 (531)
+.||||++.. +.++.++.|.++++
T Consensus 365 ~~vRis~~~~~~~~~~~i~~l~~~~~ 390 (393)
T PRK05764 365 GYVRLSYATSLEDLEEGLERIERFLE 390 (393)
T ss_pred CEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 7899999962 23334444444443
No 74
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.90 E-value=1.9e-21 Score=203.78 Aligned_cols=202 Identities=14% Similarity=0.239 Sum_probs=151.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccC--
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN-- 284 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~-- 284 (531)
|.++++++++|++++.+++.+++++||+|+++.+.|.+.+. .++..|+++..++. .|+++|++++++
T Consensus 58 g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 133 (361)
T cd06452 58 GMDEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYV----AAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVK 133 (361)
T ss_pred CCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHH----HHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHh
Confidence 34667888888899999999999999999999998887653 34566888877753 378899888862
Q ss_pred ----CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEE
Q 009604 285 ----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 285 ----~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
.++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. ......+|+|+++.|+||++++++ .+|+
T Consensus 134 ~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~--~~G~ 211 (361)
T cd06452 134 DEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASA--PIGV 211 (361)
T ss_pred hccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCC--CeEE
Confidence 248999999999999999999999999999999999999998653 345556789999999999998654 3789
Q ss_pred EEeChHHHHHHHHHhhh--------cCCCchHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHcCCCce
Q 009604 360 ISGSGKLVTQIRNLHHV--------LGGALNPNAAYLIIRGMKTLHL---RVQQQNSTALRMAKILEAHPKVK 421 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~--------~G~~~s~~~a~l~l~~L~tl~~---r~~~~~~na~~La~~L~~~p~v~ 421 (531)
++++++++++++..... .+.+.....++.+..+++.+.. ++.+..++++++.+.|++.++++
T Consensus 212 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~ 284 (361)
T cd06452 212 LATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEGIK 284 (361)
T ss_pred EEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 99999888887654321 2222222223333344443333 33444466788899999887764
No 75
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.90 E-value=1.9e-21 Score=205.62 Aligned_cols=270 Identities=17% Similarity=0.157 Sum_probs=185.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC---C--CcE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN---N--NVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~---~--~tk 288 (531)
|.+++++++||++|+..++.+++++||+|+++.+.|.+....+ ..+. .+...+...|+++|++++++ . +++
T Consensus 97 g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~-~~~~---~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 97 GTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGV-RLCK---AKRYRYANNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred CCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH-HhcC---CceEEeCCCCHHHHHHHHHhhhhcCCCce
Confidence 7789999999999999999999999999999999999866544 2332 33333456789999988874 1 489
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc-c------cc--ccCCcEEEECCccccccCCCceEEE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K------AL--SLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~-~------~l--~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+|++++++||+|.+.|+++|.++|++||++||+|++|+.+... . .. ..++|+++.|+||+++|. .+|+
T Consensus 173 ~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~---r~G~ 249 (393)
T TIGR01822 173 LIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGA---SGGF 249 (393)
T ss_pred EEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCC---CcEE
Confidence 9999999999999999999999999999999999998644321 0 11 125789999999999864 3799
Q ss_pred EEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 360 ISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 360 iv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~L~tl---~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
+++++++++.++.... .++++..+.....+...++.+ ....++..++.+.+.+.|++. ++. + ++.
T Consensus 250 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~------- 319 (393)
T TIGR01822 250 TTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA-GFD-I-KPA------- 319 (393)
T ss_pred EEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC-C-CCC-------
Confidence 9999998888765322 233333443333333444433 334455567777777778764 321 1 111
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 514 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl 514 (531)
.++++.+.+.+ ......|.+.|...++.++ |... |.. + -....||+|++.
T Consensus 320 ---------~~~~~~i~~~~-~~~~~~l~~~L~~~gI~v~-~~~~-----~~~------~--------~~~~~iRis~~~ 369 (393)
T TIGR01822 320 ---------DHPIIPVMLYD-AVLAQRFARRLLEEGIYVT-GFFY-----PVV------P--------KGQARIRVQISA 369 (393)
T ss_pred ---------CCCEEEEEeCC-HHHHHHHHHHHHHCCeeEe-eeCC-----CCC------C--------CCCceEEEEECC
Confidence 13466676643 2456677777755566665 3221 110 0 013469999999
Q ss_pred CCHHHHHHHHHHHHHh
Q 009604 515 EDFEDLKADVLQALHA 530 (531)
Q Consensus 515 E~~edli~dL~~AL~~ 530 (531)
.++++.++.+.++|++
T Consensus 370 ~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 370 AHTEEQLDRAVEAFTR 385 (393)
T ss_pred CCCHHHHHHHHHHHHH
Confidence 8887777777777754
No 76
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.90 E-value=4.2e-21 Score=202.47 Aligned_cols=272 Identities=17% Similarity=0.231 Sum_probs=178.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhccCCC
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNNNN 286 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--------~d~e~Le~al~~~~ 286 (531)
.++++++++|++++.+++.+++.+||+|+++++.|.... ..++..|.++..++. .|+++++++++++
T Consensus 83 ~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~- 157 (380)
T PRK06225 83 DDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIID----NFASRFGAEVIEVPIYSEECNYKLTPELVKENMDEN- 157 (380)
T ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHHhCceEEeeccccccCCccCCHHHHHhhcCCC-
Confidence 456888888889999999999999999999999997643 334456777766542 3789999999874
Q ss_pred cEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcccc----ccccCCcEEEECCccccccCCCceEEE
Q 009604 287 VSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----ALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 287 tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~----~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... .......+++.|+||++|..| ...|+
T Consensus 158 ~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G-~RiG~ 236 (380)
T PRK06225 158 TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAG-LRIGA 236 (380)
T ss_pred ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCcc-ceeEE
Confidence 999999999999999875 7889999999999999999974321111 111134588899999997665 45788
Q ss_pred EEeChHHHHHHHHHhh-hcCCCchHHHHHHHHHHHH---HHHHHHHH-HHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 360 ISGSGKLVTQIRNLHH-VLGGALNPNAAYLIIRGMK---TLHLRVQQ-QNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 360 iv~~~~li~~l~~~~~-~~G~~~s~~~a~l~l~~L~---tl~~r~~~-~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
+++++++++.++.... ..+ .+......+...++ .+..++.+ ..++...+.+.|++.+++....+|.
T Consensus 237 i~~~~~l~~~~~~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------- 307 (380)
T PRK06225 237 VVATPDLIEVVKSIVINDLG--TNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPS------- 307 (380)
T ss_pred EecCHHHHHHHHHHHhcccC--CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCC-------
Confidence 8899988888776542 222 23333332222332 22222222 2344556677787655432111221
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 514 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl 514 (531)
.|+++++.++.......+|.+.|...++.+..|..++ + +..++.+|+|++.
T Consensus 308 ---------~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~----~----------------~~~~~~iR~s~~~ 358 (380)
T PRK06225 308 ---------HGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTS----K----------------RFGDRYIRVSFSI 358 (380)
T ss_pred ---------CCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccC----c----------------CCCCceEEEEeCC
Confidence 3678888885321234567777765566666553221 0 0125789999997
Q ss_pred --CCHHHHHHHHHHHHHh
Q 009604 515 --EDFEDLKADVLQALHA 530 (531)
Q Consensus 515 --E~~edli~dL~~AL~~ 530 (531)
|+.+.+++.|.++++.
T Consensus 359 ~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 359 PREQVEVFCEEFPDVVET 376 (380)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 3455666666666653
No 77
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.90 E-value=6e-22 Score=210.66 Aligned_cols=284 Identities=17% Similarity=0.181 Sum_probs=185.6
Q ss_pred CcEEEeCChHHHHHHHHHHhc----cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC
Q 009604 216 ESTVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN 286 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all----~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~ 286 (531)
++++++++|++++.+++.++. ++||+|+++..+|.+....+. .++..|+++..++. .|+++|+++++++
T Consensus 65 ~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~- 142 (402)
T TIGR02006 65 REIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-YLEREGFEVTYLPPKSNGLIDLEELKAAIRDD- 142 (402)
T ss_pred CeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-HHHhcCCEEEEEccCCCCcCCHHHHHHhcCCC-
Confidence 457777777899998877653 689999999999988766553 34566888888764 3799999999874
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-ccccccCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
+++|++++++||+|.+.|+++|.++|+++|+++++|++++.+.. .+...+++|+++.|++|++|++| .|+++.+++
T Consensus 143 ~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G---~G~l~~~~~ 219 (402)
T TIGR02006 143 TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKG---IGALYVRRK 219 (402)
T ss_pred CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCc---eEEEEEccC
Confidence 99999999999999999999999999999999999999876633 34456789999999999988766 466655543
Q ss_pred HHHHHHHHh-------hhcCCCchHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 366 LVTQIRNLH-------HVLGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 366 li~~l~~~~-------~~~G~~~s~~~a~l~l~~L~tl----~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
....+.... ....++.+......+...++.+ ..+.++..+.+..+.+.|++.+++. +..+. . .
T Consensus 220 ~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~-~~~~~-~----~ 293 (402)
T TIGR02006 220 PRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVY-LNGDL-E----H 293 (402)
T ss_pred CCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCc-c----c
Confidence 332222111 1111233332222222334333 3333444556666667777666653 22111 0 0
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCC----CCeEEE
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM----DNLVRF 510 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~----~~lIRl 510 (531)
..++++.|.+++. ..+.++..|+ ++.++.|..|+.... .+......+|+. .+.||+
T Consensus 294 --------~~p~~~~v~f~~~--~~~~~~~~l~--~i~v~~G~~c~~~~~--------~~~~~l~~lg~~~~~~~~~vR~ 353 (402)
T TIGR02006 294 --------RVPGNLNVSFNYV--EGESLIMALK--DLAVSSGSACTSASL--------EPSYVLRALGINDELAHSSIRF 353 (402)
T ss_pred --------cCCCeEEEEEeCc--CHHHHHHhcC--CEEEechhhcCCCCC--------CccHHHHHcCCChhhcCceEEE
Confidence 0122333444321 1234555554 567777765542110 011233456654 479999
Q ss_pred EecCCCHHHHHHHHHHHHHh
Q 009604 511 SFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 511 SvGlE~~edli~dL~~AL~~ 530 (531)
|+|..++++.++.|.++|++
T Consensus 354 S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 354 TIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred EecCCCCHHHHHHHHHHHHH
Confidence 99999999999999988864
No 78
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.90 E-value=4.7e-21 Score=202.23 Aligned_cols=254 Identities=16% Similarity=0.178 Sum_probs=171.6
Q ss_pred CcEEEeCCh-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 216 ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 216 e~~i~~sSG-~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
++.|++++| ++++..++..++++||+|+++.|+|..... .++..|+++..++. .|++++++++.+ ++
T Consensus 91 ~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~-~~ 165 (383)
T TIGR03540 91 ETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRI----GTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK-KA 165 (383)
T ss_pred CCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHH----HHHhcCCEEEEEecCcccCCccCHHHHHhhccc-cc
Confidence 334555555 599999999999999999999999987543 33456777766543 167899888876 49
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc-----cc--ccc--cCCcEEEECCccccccCCCc
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QK--ALS--LGADLVLHSATKFIGGHNDV 355 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~-----~~--~l~--~gaDivv~S~sK~lgg~g~v 355 (531)
++|++++|+||||.+++ +++|+++|+++|++||+|++|..... .. .+. ....+++.|+||.+|.+|.
T Consensus 166 ~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl- 244 (383)
T TIGR03540 166 KLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGW- 244 (383)
T ss_pred eEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccc-
Confidence 99999999999999998 67888899999999999999864321 11 111 1234888999999986664
Q ss_pred eEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCC
Q 009604 356 LAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSH 431 (531)
Q Consensus 356 ~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~ 431 (531)
..|++++++++++.+.......+...+......+...+ +.+....+...+++..+.+.|+++ ++. +..|.
T Consensus 245 RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~---- 318 (383)
T TIGR03540 245 RIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GID-VEKPK---- 318 (383)
T ss_pred eeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCE-ecCCC----
Confidence 46888999999888877655444333333333333333 233344455567778888888876 332 22221
Q ss_pred chhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEE
Q 009604 432 PEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRF 510 (531)
Q Consensus 432 p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRl 510 (531)
.|.++++.++.+ .+..+|.+.| +..++.+..|..+.. -.++.|||
T Consensus 319 ------------~~~~~~~~l~~~-~~~~~~~~~ll~~~gi~v~~g~~f~~---------------------~~~~~~Ri 364 (383)
T TIGR03540 319 ------------ATFYVWVPVPEG-YTSAEFAARLLEETGVVVTPGVGFGE---------------------YGEGYIRI 364 (383)
T ss_pred ------------cceEEEEECCCC-CCHHHHHHHHHHHCCEEEecchhhCc---------------------cCCCeEEE
Confidence 244578888643 2345667664 445666666643210 01478999
Q ss_pred EecCC
Q 009604 511 SFGVE 515 (531)
Q Consensus 511 SvGlE 515 (531)
|+|..
T Consensus 365 s~~~~ 369 (383)
T TIGR03540 365 SLTVP 369 (383)
T ss_pred EecCC
Confidence 99953
No 79
>PLN02721 threonine aldolase
Probab=99.90 E-value=1.8e-21 Score=202.31 Aligned_cols=268 Identities=18% Similarity=0.212 Sum_probs=185.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcc-CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccC---
Q 009604 214 GAESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNN--- 284 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~-pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~--- 284 (531)
+.+..+++++|++++..++.++++ +||+|++++++|...+... ..+...|+++.+++. .|++++++++++
T Consensus 54 ~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 132 (353)
T PLN02721 54 GKEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGD 132 (353)
T ss_pred CCceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcCCCcCHHHHHHHHHhccC
Confidence 456689999999888888888777 9999999999986654310 134556888887763 378999999972
Q ss_pred ---CCcEEEEEeCC-CCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCC------ccccccccCCcEEEECCcccccc
Q 009604 285 ---NNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGG 351 (531)
Q Consensus 285 ---~~tklV~lesP-~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~------~~~~~l~~gaDivv~S~sK~lgg 351 (531)
.++++|+++++ +||+|.+.| +++|.++|+++|+++|+|+++... ........++|.++.|+||++++
T Consensus 133 ~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~ 212 (353)
T PLN02721 133 DHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGA 212 (353)
T ss_pred CCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCC
Confidence 14899999885 678999887 679999999999999999986422 11122233789999999999986
Q ss_pred CCCceEEEEEeChHHHHHHHHHhhhcCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceE-EeCCCC
Q 009604 352 HNDVLAGSISGSGKLVTQIRNLHHVLGGALNP--NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKR-VHYPGL 428 (531)
Q Consensus 352 ~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~--~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~-V~~pgl 428 (531)
. .||++++++++++.+.......+..+.. ..++..+.++++...++++..++++.+.+.|++.+++.. +..|
T Consensus 213 ~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-- 287 (353)
T PLN02721 213 P---VGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAV-- 287 (353)
T ss_pred c---eeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCc--
Confidence 5 3566778888888877665544433322 223334446666556666667788889999988766532 1111
Q ss_pred CCCchhhhhhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009604 429 KSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 507 (531)
Q Consensus 429 ~s~p~~~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~l 507 (531)
.+++++|.++.. ......+.+.|...++.+..+ .++.
T Consensus 288 ---------------~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~---------------------------~~~~ 325 (353)
T PLN02721 288 ---------------ETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPG---------------------------NSSR 325 (353)
T ss_pred ---------------cceEEEEEccCCccccHHHHHHHHHhCCcEEecC---------------------------CCce
Confidence 246888888632 124566777776555544432 1458
Q ss_pred EEEEecCCCHHHHHHHHHHHHH
Q 009604 508 VRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 508 IRlSvGlE~~edli~dL~~AL~ 529 (531)
||+++++..+++.++.+.++|+
T Consensus 326 lR~~~~~~~~~~~i~~~~~~l~ 347 (353)
T PLN02721 326 IRVVTHHQISDSDVQYTLSCFQ 347 (353)
T ss_pred EEEEecCcCCHHHHHHHHHHHH
Confidence 9999987666666666666654
No 80
>PRK08960 hypothetical protein; Provisional
Probab=99.90 E-value=2.9e-21 Score=204.25 Aligned_cols=267 Identities=16% Similarity=0.117 Sum_probs=176.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
.+++++++++++++.+++.+++++||+|++++|+|......+. ..|.++..++. .|+++++++++++ +
T Consensus 92 ~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~-~ 166 (387)
T PRK08960 92 PERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLR----LVEGAAQLVPVGPDSRYQLTPALVERHWNAD-T 166 (387)
T ss_pred hhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hcCCeEEEEecCcccCCCCCHHHHHHHhCcc-c
Confidence 4566666677799999999999999999999999988765443 33555554432 3688999988874 8
Q ss_pred EEEEEeCCCCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCCccc----cccccC-CcEEEECCccccccCCCceEEE
Q 009604 288 SLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLG-ADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~~~~----~~l~~g-aDivv~S~sK~lgg~g~v~gG~ 359 (531)
++|++++|+||||.+++. ++|+++|+++|+++|+|++|...... ...... ..+++.|+||.+|.+|. ..|+
T Consensus 167 ~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~ 245 (387)
T PRK08960 167 VGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGW-RLGW 245 (387)
T ss_pred eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCccc-EEEE
Confidence 999999999999999985 46777789999999999998643211 112222 23788999999987764 4789
Q ss_pred EEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 360 ISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
+++++++++.+.......+...+.....++...+ +.+....++..++++.+.+.|++++ +..+.+|.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~-~~~~~~p~------- 317 (387)
T PRK08960 246 LVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELG-FGIAVEPQ------- 317 (387)
T ss_pred EEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcC-CcCCcCCC-------
Confidence 9999999888877665444444444333222233 2233334445566777888888753 21111222
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 513 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG 513 (531)
.|.+++++++....+...|.+.| +..++.+..|..+.. +..++.+||+++
T Consensus 318 ---------g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--------------------~~~~~~iRi~~~ 368 (387)
T PRK08960 318 ---------GAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGR--------------------HQAGQHVRFAYT 368 (387)
T ss_pred ---------eeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCC--------------------CCCCCeEEEEec
Confidence 35677888863112235666554 445666666643321 012468999999
Q ss_pred CCCHHHHHHHHH
Q 009604 514 VEDFEDLKADVL 525 (531)
Q Consensus 514 lE~~edli~dL~ 525 (531)
. +.+.+.+.|.
T Consensus 369 ~-~~~~l~~al~ 379 (387)
T PRK08960 369 Q-SLPRLQEAVE 379 (387)
T ss_pred C-CHHHHHHHHH
Confidence 7 4555555444
No 81
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.89 E-value=2.6e-21 Score=200.61 Aligned_cols=270 Identities=20% Similarity=0.203 Sum_probs=189.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC----CCcEE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN----NNVSL 289 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~----~~tkl 289 (531)
+.++.+++++|++++..++.+++++||+|+++++.|.+.... +...|+++..++..|++++++++++ .++++
T Consensus 60 ~~~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~ 135 (349)
T cd06454 60 GKEAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDG----IRLSGAKKRIFKHNDMEDLEKLLREARRPYGKKL 135 (349)
T ss_pred CCCCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHH----HHHcCCceEEecCCCHHHHHHHHHHhhccCCCeE
Confidence 445689999999999988888999999999999999876533 3456888887777788888888864 34789
Q ss_pred EEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc---------ccccccCCcEEEECCccccccCCCceEEEE
Q 009604 290 FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---------QKALSLGADLVLHSATKFIGGHNDVLAGSI 360 (531)
Q Consensus 290 V~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~---------~~~l~~gaDivv~S~sK~lgg~g~v~gG~i 360 (531)
|++++|+||+|.+.|+++|+++|+++|+++|+|++++.+.. ......+.|+++.|+||.+++. +|++
T Consensus 136 v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----gG~i 211 (349)
T cd06454 136 IVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAV----GGYI 211 (349)
T ss_pred EEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhccc----CCEE
Confidence 99999999999999999999999999999999999864321 1112357899999999999864 4888
Q ss_pred EeChHHHHHHHHHhhh--cCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhh
Q 009604 361 SGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHH 435 (531)
Q Consensus 361 v~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~L~tl---~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~ 435 (531)
++++++.+.++..... .+...++.....+...++.+ ..+.++..++++.+.+.|.++ ++.. ++. +
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~--~~~----~--- 281 (349)
T cd06454 212 AGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL-GFPV--GGS----P--- 281 (349)
T ss_pred ECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCcc--cCC----C---
Confidence 8888888777654332 23345555444444555543 344566667777777777764 2211 110 0
Q ss_pred hhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009604 436 IATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 515 (531)
Q Consensus 436 l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE 515 (531)
.+.++.+.++. .....++.+.|...++.++.++.... ....+.|||+++..
T Consensus 282 --------~~~~~~~~~~~-~~~~~~~~~~L~~~gI~~~~~~~~~~--------------------~~~~~~iRi~~~~~ 332 (349)
T cd06454 282 --------SHIIPPLIGDD-PAKAVAFSDALLERGIYVQAIRYPTV--------------------PRGTARLRISLSAA 332 (349)
T ss_pred --------CCcEEEEeCCC-hHHHHHHHHHHHhCCceEEEecCCcc--------------------CCCCCeEEEEEeCC
Confidence 12234444432 23456777777655666554321100 01147899999998
Q ss_pred CHHHHHHHHHHHHHh
Q 009604 516 DFEDLKADVLQALHA 530 (531)
Q Consensus 516 ~~edli~dL~~AL~~ 530 (531)
.+++.++++.++|+.
T Consensus 333 ~~~~~i~~~~~~l~~ 347 (349)
T cd06454 333 HTKEDIDRLLEALKE 347 (349)
T ss_pred CCHHHHHHHHHHHHH
Confidence 888899999888875
No 82
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.89 E-value=3.8e-21 Score=202.42 Aligned_cols=260 Identities=18% Similarity=0.202 Sum_probs=175.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhccCCC
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNNNN 286 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--------~d~e~Le~al~~~~ 286 (531)
.++++++++|++++.+++.+++++||+|+++.|+|..... .++..|+++..++. .|+++|++.+++ +
T Consensus 84 ~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-~ 158 (382)
T PRK06108 84 PERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVA----APKILGARVVCVPLDFGGGGWTLDLDRLLAAITP-R 158 (382)
T ss_pred cceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHH----HHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc-c
Confidence 4567777777899999999999999999999999987543 34556888777653 368999999877 4
Q ss_pred cEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc------cccc----cCCcEEEECCccccccCC
Q 009604 287 VSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ------KALS----LGADLVLHSATKFIGGHN 353 (531)
Q Consensus 287 tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~------~~l~----~gaDivv~S~sK~lgg~g 353 (531)
+++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .... ....+++.|+||.++..|
T Consensus 159 ~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 238 (382)
T PRK06108 159 TRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTG 238 (382)
T ss_pred ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcc
Confidence 999999999999999986 578888999999999999997644221 0011 124588999999998665
Q ss_pred CceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCC
Q 009604 354 DVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 429 (531)
Q Consensus 354 ~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~ 429 (531)
. ..|++++++++++.+...........+......+...++ .+....++..++.+.+.+.|++++++. +..|.
T Consensus 239 ~-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~-- 314 (382)
T PRK06108 239 W-RLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVE-VAKPD-- 314 (382)
T ss_pred c-ceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCC--
Confidence 3 478899999998888765543333334443333333332 233444555566777888887765442 11111
Q ss_pred CCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009604 430 SHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 508 (531)
Q Consensus 430 s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lI 508 (531)
.|.++++.+++. .....|.+.| +..++.+..|..+. + ..++.|
T Consensus 315 --------------~g~~~~~~l~~~-~~~~~~~~~ll~~~gV~v~pg~~f~----~-----------------~~~~~~ 358 (382)
T PRK06108 315 --------------GAMYAFFRIPGV-TDSLALAKRLVDEAGLGLAPGTAFG----P-----------------GGEGFL 358 (382)
T ss_pred --------------eeEEEEEeCCCC-CCHHHHHHHHHHhCCEEEeCchhhC----C-----------------CCCCEE
Confidence 245678888642 2344566655 44566666554321 0 125789
Q ss_pred EEEecCCCHHHH
Q 009604 509 RFSFGVEDFEDL 520 (531)
Q Consensus 509 RlSvGlE~~edl 520 (531)
|||++. +.+++
T Consensus 359 Ris~~~-~~~~l 369 (382)
T PRK06108 359 RWCFAR-DPARL 369 (382)
T ss_pred EEEecC-CHHHH
Confidence 999999 44443
No 83
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2e-21 Score=205.80 Aligned_cols=257 Identities=14% Similarity=0.162 Sum_probs=174.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
+++++++++|++++.+++.+++++||+|++++|+|.+... .+...|+++..++. .|+++++++++++ +
T Consensus 93 ~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~ 167 (391)
T PRK08361 93 VDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVE----DAKIAEAKPIRIPLREENEFQPDPDELLELITKR-T 167 (391)
T ss_pred cccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH----HHHHcCCEEEEEecCCccCCCCCHHHHHHhcccc-c
Confidence 4677777777899999999999999999999999988653 33445777766642 4789999999874 9
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----cc--cccCCcEEEECCccccccCCCceE
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KA--LSLGADLVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~--l~~gaDivv~S~sK~lgg~g~v~g 357 (531)
++|++++|+||||.++| +++|.++|+++++++|+|++|...... .. .....++++.|+||.++.+|. ..
T Consensus 168 ~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~Gl-Ri 246 (391)
T PRK08361 168 RMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGW-RL 246 (391)
T ss_pred EEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHh-hh
Confidence 99999999999999999 788899999999999999998653211 11 112356899999999986664 36
Q ss_pred EEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCC
Q 009604 358 GSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSH 431 (531)
Q Consensus 358 G~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~------tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~ 431 (531)
|++++++++++.+...........+......+...++ .+....++..++...+.+.|++.+++. +..|.
T Consensus 247 G~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~-~~~p~---- 321 (391)
T PRK08361 247 GFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIK-VFEPK---- 321 (391)
T ss_pred hhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCe-ecCCC----
Confidence 8888898888887765543333334443333333332 233333444566677788888765542 22221
Q ss_pred chhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEE
Q 009604 432 PEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRF 510 (531)
Q Consensus 432 p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRl 510 (531)
.|.+++++++.......+|.+.| +..++.+..|..+.. ..++.|||
T Consensus 322 ------------g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRi 368 (391)
T PRK08361 322 ------------GAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGK---------------------AGEGYIRI 368 (391)
T ss_pred ------------EEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCC---------------------CCCCEEEE
Confidence 23467778863112234555555 335666655533210 12478999
Q ss_pred EecCC
Q 009604 511 SFGVE 515 (531)
Q Consensus 511 SvGlE 515 (531)
+++..
T Consensus 369 ~~~~~ 373 (391)
T PRK08361 369 SYATS 373 (391)
T ss_pred EecCC
Confidence 99963
No 84
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.89 E-value=1.3e-20 Score=191.19 Aligned_cols=310 Identities=22% Similarity=0.205 Sum_probs=209.8
Q ss_pred CCcccCCCcccCCHHHHHHHHhhc--cCCCccCCCCCCCCC---------------CCCcEEEeCChHHHHHHHHHHhcc
Q 009604 175 TPVVNTSAYFFKKTAELIDFKEKR--RASFEYGRYGNPTTV---------------GAESTVIMASGMSASTVMLLALVP 237 (531)
Q Consensus 175 ~Pi~~sst~~f~~~~~~~~~~~~~--~~~~~Y~R~gnPt~~---------------g~e~~i~~sSG~~Ai~~al~all~ 237 (531)
-|...+. +.|..+..+.+....+ .+.|.|+ +++.... ..+..++.++.+-++.++++++.+
T Consensus 28 lPmWVAD-MDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~ 105 (388)
T COG1168 28 LPMWVAD-MDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK 105 (388)
T ss_pred ceeeeec-ccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCc
Confidence 4555554 5677777666544432 3457787 5665333 445555555556999999999999
Q ss_pred CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhccCCCcEEEEEeCCCCCCCcccC---HH
Q 009604 238 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VK 306 (531)
Q Consensus 238 pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--------~d~e~Le~al~~~~tklV~lesP~NPtG~v~d---l~ 306 (531)
+||.|++..|.|.+.+..+. ..|-++...+. .|.++||+++.+.++|+.++||||||+|++.. |.
T Consensus 106 ~gd~Vvi~tPvY~PF~~~i~----~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~ 181 (388)
T COG1168 106 PGDGVVIQTPVYPPFYNAIK----LNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELR 181 (388)
T ss_pred CCCeeEecCCCchHHHHHHh----hcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHH
Confidence 99999999999999876553 33444444432 28999999998766899999999999999985 77
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCcccc-----c--c-ccCCc--EEEECCccccccCCCceEEEEEeChHHHHHHH-HHhh
Q 009604 307 LVSDLCHKKGAIVCIDGTFATPLNQK-----A--L-SLGAD--LVLHSATKFIGGHNDVLAGSISGSGKLVTQIR-NLHH 375 (531)
Q Consensus 307 ~I~~la~~~gi~lIvD~a~a~~~~~~-----~--l-~~gaD--ivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~-~~~~ 375 (531)
+|.++|.+||++||.||.++...... . + ...+| +++.|.||.|+-.|...+-+|+.++++.++.. ++..
T Consensus 182 ~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~ 261 (388)
T COG1168 182 KIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKR 261 (388)
T ss_pred HHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHH
Confidence 88899999999999999987543211 1 1 11123 78889999999877655666777777754433 3333
Q ss_pred hcCCCchHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCceEEeCCCCCCCchhhhhhhhcCCcccEEEE
Q 009604 376 VLGGALNPNAAYL----IIRGMKTLHLRVQQQNSTALRMAKILEAH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF 450 (531)
Q Consensus 376 ~~G~~~s~~~a~l----~l~~L~tl~~r~~~~~~na~~La~~L~~~-p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf 450 (531)
......+.+.... -..|-..|..-++-..+|...+.+.|.++ |+|+ +.-|. ...++++
T Consensus 262 ~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~----------------gTYL~WL 324 (388)
T COG1168 262 NGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQ----------------GTYLAWL 324 (388)
T ss_pred hcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCC----------------Cceeeee
Confidence 3333333332111 12455566776777889999999999876 7774 44443 3458888
Q ss_pred EEcC---CHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHH
Q 009604 451 EVDG---DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVL 525 (531)
Q Consensus 451 ~l~g---~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE--~~edli~dL~ 525 (531)
++.. +.++.++|+.. ..+++.+.|..+.- -..|++|+.++.. ..++-++.|.
T Consensus 325 D~r~l~l~d~~l~~~ll~--~akVal~~G~~FG~---------------------~g~gf~RlN~acpr~~L~eal~ri~ 381 (388)
T COG1168 325 DCRELGLDDSELAEFLLE--EAKVALSPGSTFGE---------------------EGSGFVRLNFACPRAILEEALERLK 381 (388)
T ss_pred eccccCCChHHHHHHHHH--hhcEeccCCCccCc---------------------CCCceEEEecCCCHHHHHHHHHHHH
Confidence 8864 22345555443 34677787744321 1268999999975 4577888888
Q ss_pred HHHHh
Q 009604 526 QALHA 530 (531)
Q Consensus 526 ~AL~~ 530 (531)
++|++
T Consensus 382 ~al~~ 386 (388)
T COG1168 382 RALKK 386 (388)
T ss_pred HHHhc
Confidence 88865
No 85
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.89 E-value=2.8e-21 Score=207.36 Aligned_cols=264 Identities=16% Similarity=0.162 Sum_probs=178.4
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----CCHHHHHHhccCCCcEEEEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNNNVSLFFT 292 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~d~e~Le~al~~~~tklV~l 292 (531)
++++++++++++.+++.++++|||.|++++|+|..... .++..|+++..++. .|+++|++++++ ++|+|++
T Consensus 143 ~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~-~~k~i~~ 217 (431)
T PRK15481 143 EIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSIN----MLRYAGFSASPVSVDAEGMQPEKLERALAQ-GARAVIL 217 (431)
T ss_pred eEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH----HHHHcCCeEEeeccCCCCCCHHHHHHHHhc-CCCEEEE
Confidence 44444444599999999999999999999999988654 34455777766643 478999999877 4899888
Q ss_pred e-CCCCCCCcccCHH---HHHHHHHhc-CCEEEEeCCCCCCcc---ccccc--cCCcEEEECCccccccCCCceEEEEEe
Q 009604 293 E-SPTNPFLRCVDVK---LVSDLCHKK-GAIVCIDGTFATPLN---QKALS--LGADLVLHSATKFIGGHNDVLAGSISG 362 (531)
Q Consensus 293 e-sP~NPtG~v~dl~---~I~~la~~~-gi~lIvD~a~a~~~~---~~~l~--~gaDivv~S~sK~lgg~g~v~gG~iv~ 362 (531)
+ +|+||||.+++.+ +|.++|+++ +++||+||+|..... ..++. ....+++.|+||.++ +|. ..|++++
T Consensus 218 ~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~Gl-RiG~~i~ 295 (431)
T PRK15481 218 TPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDL-RLAFVAS 295 (431)
T ss_pred CCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCc-eeEEEeC
Confidence 7 9999999999975 899999999 999999999864321 11121 123489999999999 664 4789999
Q ss_pred ChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhh
Q 009604 363 SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHI 436 (531)
Q Consensus 363 ~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~t------l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l 436 (531)
++++++.+...........+.....++...++. +....+...++.+.+.+.|+++ ++ .+..|.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~-~~~~p~--------- 364 (431)
T PRK15481 296 DSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GI-AIPSPG--------- 364 (431)
T ss_pred CHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CC-ccccCC---------
Confidence 999988887654433333455444444444432 2333444556677788888765 22 121222
Q ss_pred hhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC
Q 009604 437 ATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED 516 (531)
Q Consensus 437 ~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~ 516 (531)
.|.++++.++.+ ...|.+.|...++.+..|..+.. + -.++.||||+|..+
T Consensus 365 -------gg~f~~~~l~~~---~~~~~~~l~~~gV~v~pg~~f~~---~-----------------~~~~~iRis~~~~~ 414 (431)
T PRK15481 365 -------DGLNLWLPLDTD---SQATALTLAKSGWLVREGEAFGV---S-----------------APSHGLRITLSTLN 414 (431)
T ss_pred -------CeEEEEEECCCC---HHHHHHHHHHCCcEEecCCcccc---C-----------------CCCCeEEEEcCCCC
Confidence 477889988642 34566666555777766644311 0 01368999999744
Q ss_pred ---HHHHHHHHHHHH
Q 009604 517 ---FEDLKADVLQAL 528 (531)
Q Consensus 517 ---~edli~dL~~AL 528 (531)
.++.++.|.+++
T Consensus 415 ~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 415 DAEINRLAADLHQAL 429 (431)
T ss_pred hHHHHHHHHHHHHHh
Confidence 344555555554
No 86
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=6.2e-21 Score=199.27 Aligned_cols=260 Identities=14% Similarity=0.192 Sum_probs=173.4
Q ss_pred cEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCcEEE
Q 009604 217 STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tklV 290 (531)
+.|++++|+ +++..++.+++++||+|+++.|.|.... ..++..|.++..++. .|++++++++++.++|+|
T Consensus 77 ~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v 152 (351)
T PRK14807 77 TNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYS----VYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLV 152 (351)
T ss_pred ccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEE
Confidence 345555555 8899999999999999999999997533 234456777766653 368999999975459999
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccc---c-ccCCcEEEECCccccccCCCceEEEEEeChHH
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKL 366 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~---l-~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l 366 (531)
++++|+||||.+.+.+++.+++++++.++|+|++|........ . .....+++.|+||.++.+|. ..|++++++++
T Consensus 153 ~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~Gl-RiG~~v~~~~~ 231 (351)
T PRK14807 153 FLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGL-RVGYAVANENI 231 (351)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchh-ceeeeecCHHH
Confidence 9999999999999999999999998889999999864322111 1 12345899999999986654 46888999999
Q ss_pred HHHHHHHhhhcCCCchHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCc
Q 009604 367 VTQIRNLHHVLGGALNPNAAYLIIRGMK--TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGF 444 (531)
Q Consensus 367 i~~l~~~~~~~G~~~s~~~a~l~l~~L~--tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~ 444 (531)
++.++.....+. .+......+...++ .+..+++...++++.+.+.|++.+++. + +|. .
T Consensus 232 ~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~-~-~~~----------------~ 291 (351)
T PRK14807 232 LKYLNLVKSPYN--INSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIK-V-YPS----------------K 291 (351)
T ss_pred HHHHHHccCCCC--cCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CcC----------------C
Confidence 888876543222 33333333333332 344445555667777888887665542 2 222 2
Q ss_pred ccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHH
Q 009604 445 GGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED-FEDLKAD 523 (531)
Q Consensus 445 g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~-~edli~d 523 (531)
|+++++.++. ...+.+.|...++.+..++.. .+ .++.+||+++..+ .+.+++.
T Consensus 292 ~~~~~i~~~~----~~~~~~~l~~~gV~v~~~~~~---------------------~~-~~~~iRis~~~~~~~~~l~~~ 345 (351)
T PRK14807 292 TNFILVKFKD----ADYVYQGLLERGILVRDFSKV---------------------EG-LEGALRITVSSCEANDYLING 345 (351)
T ss_pred ccEEEEEcCC----HHHHHHHHHHCCEEEEECCCC---------------------CC-CCCeEEEEcCCHHHHHHHHHH
Confidence 5677788753 234555554445554321100 01 2468999999643 3455555
Q ss_pred HHHH
Q 009604 524 VLQA 527 (531)
Q Consensus 524 L~~A 527 (531)
|++.
T Consensus 346 l~~~ 349 (351)
T PRK14807 346 LKEL 349 (351)
T ss_pred HHHh
Confidence 5543
No 87
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.89 E-value=7e-21 Score=201.91 Aligned_cols=266 Identities=12% Similarity=0.092 Sum_probs=171.4
Q ss_pred CCcEEEe-CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCC
Q 009604 215 AESTVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNN 286 (531)
Q Consensus 215 ~e~~i~~-sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~ 286 (531)
.++.+++ +++++++..++.+++++||+|+++.|+|......+ ...|+++..++. .|++++++.+++ +
T Consensus 96 ~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~ 170 (394)
T PRK05942 96 PDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGP----LIAGAQIYPIILKPENDWLIDLSSIPEEVAQ-Q 170 (394)
T ss_pred CCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCEEEEeecCCccCCccCHHHHHHhccc-c
Confidence 3444544 55569999999999999999999999998865433 345777766642 368899998877 5
Q ss_pred cEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----cc---cc--cCCcEEEECCccccccCCC
Q 009604 287 VSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA---LS--LGADLVLHSATKFIGGHND 354 (531)
Q Consensus 287 tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~---l~--~gaDivv~S~sK~lgg~g~ 354 (531)
+|+|++++|+||||.+++ +++|.++|+++|++||+|++|...... .+ +. .+..+++.|+||.++.+|.
T Consensus 171 ~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~Gl 250 (394)
T PRK05942 171 AKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGW 250 (394)
T ss_pred ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhh
Confidence 999999999999999998 678888999999999999997643210 01 11 1235788999999976664
Q ss_pred ceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCC
Q 009604 355 VLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 430 (531)
Q Consensus 355 v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~t----l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s 430 (531)
..|++++++++++.++......+...+......+...++. +....++..++.+.+.+.|++. ++ .+.-|.
T Consensus 251 -RiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~-~~~~~~--- 324 (394)
T PRK05942 251 -RVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-GW-NIPPTK--- 324 (394)
T ss_pred -heeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CC-eecCCC---
Confidence 4688889999999888766543333343333333333332 2222334445566677777654 22 121111
Q ss_pred CchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHH-HcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEE
Q 009604 431 HPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID-ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 509 (531)
Q Consensus 431 ~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~-~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIR 509 (531)
.|..+++.++... ...+|.. .++..++.+..|..+.. ..+++||
T Consensus 325 -------------~~~f~~~~~~~~~-~~~~~~~~~l~~~gV~v~~g~~f~~---------------------~~~~~iR 369 (394)
T PRK05942 325 -------------ATMYLWVPCPVGM-GSTDFALNVLQKTGVVVTPGNAFGE---------------------GGEGYVR 369 (394)
T ss_pred -------------eeeEEEEECCCCC-CHHHHHHHHHHHCCEEEeCChhhCc---------------------CCCCeEE
Confidence 2346888886421 2223333 33444655555533210 1247899
Q ss_pred EEecCCCHHHHHHHHHHH
Q 009604 510 FSFGVEDFEDLKADVLQA 527 (531)
Q Consensus 510 lSvGlE~~edli~dL~~A 527 (531)
|+++ .+.+.+.+.|.+.
T Consensus 370 is~~-~~~~~l~~~l~~l 386 (394)
T PRK05942 370 ISLI-ADCDRLGEALDRL 386 (394)
T ss_pred EEec-CCHHHHHHHHHHH
Confidence 9998 4455555555543
No 88
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.89 E-value=7.5e-21 Score=201.02 Aligned_cols=266 Identities=12% Similarity=0.126 Sum_probs=174.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
.+++++++++++|+.+++.+++++||+|+++.|+|......+ ...|.++..++. .|+++|++++++ ++
T Consensus 89 ~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~ 163 (384)
T PRK06348 89 RNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQI----EMVGGKPIILETYEEDGFQINVKKLEALITS-KT 163 (384)
T ss_pred hhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHH----HHcCCEEEEecCCcCcCCcCCHHHHHHhhCc-Cc
Confidence 456666666679999999999999999999999998865444 334666555532 478999999876 48
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc---cc---cc--cCCcEEEECCccccccCCCce
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---KA---LS--LGADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~---~~---l~--~gaDivv~S~sK~lgg~g~v~ 356 (531)
++|++++|+||||.+++ +++|.++|+++|++||+|++|...... .+ +. .+..+++.|+||.++.+|. .
T Consensus 164 ~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-R 242 (384)
T PRK06348 164 KAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGW-R 242 (384)
T ss_pred cEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccc-c
Confidence 99999999999999996 677888899999999999998754321 11 11 2345889999999986664 4
Q ss_pred EEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCc
Q 009604 357 AGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHP 432 (531)
Q Consensus 357 gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~t----l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p 432 (531)
.|++++++++++.+...........+......+...+.. +....+...++.+.+.+.|++.+.+ .+..|.
T Consensus 243 iG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~-~~~~p~----- 316 (384)
T PRK06348 243 IGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNL-SLHPPK----- 316 (384)
T ss_pred ceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCc-eeccCC-----
Confidence 788999988888887766543333444433333333322 2222233445566777888765543 222121
Q ss_pred hhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE
Q 009604 433 EHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS 511 (531)
Q Consensus 433 ~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlS 511 (531)
.|-+++++++........|.+.+ +..++.+..|..+.. ..++.|||+
T Consensus 317 -----------gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRi~ 364 (384)
T PRK06348 317 -----------GSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGE---------------------SGEGYIRLA 364 (384)
T ss_pred -----------eeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhcc---------------------CCCCeEEEE
Confidence 23456888863112334555554 345666666644310 024789999
Q ss_pred ecCCCHHHHHHHHH
Q 009604 512 FGVEDFEDLKADVL 525 (531)
Q Consensus 512 vGlE~~edli~dL~ 525 (531)
++. +.+++.+.++
T Consensus 365 ~~~-~~~~l~~al~ 377 (384)
T PRK06348 365 CTV-GIEVLEEAFN 377 (384)
T ss_pred ecC-CHHHHHHHHH
Confidence 985 5555444443
No 89
>PRK04311 selenocysteine synthase; Provisional
Probab=99.89 E-value=6.3e-22 Score=212.95 Aligned_cols=199 Identities=24% Similarity=0.314 Sum_probs=159.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCc---cchHHHHHhhcccCCcEEEEeCC---CCHHHHHHhccCCCc
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCY---RKTRIFIETVLPKMGITATVIDP---ADMEGLEAALNNNNV 287 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y---~~t~~~~~~~l~~~Gi~v~~vd~---~d~e~Le~al~~~~t 287 (531)
|++++++++||++|+.+++.+ +.+||+||+++.+| ++++.+ ...++..|+++.+++. .++++++++|+++ |
T Consensus 141 Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~~~~ggs~~i-~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~~-T 217 (464)
T PRK04311 141 GAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGELVEIGGAFRI-PDVMRQAGARLVEVGTTNRTHLRDYEQAINEN-T 217 (464)
T ss_pred CCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhhhhcCcchhh-HHHHHHCCcEEEEECCCCCCCHHHHHHhcCcc-C
Confidence 889999999999999988865 58999999998744 344443 2456778999998875 4689999999885 9
Q ss_pred EEEEEeCCCCCC----CcccCHHHHHHHHHhcCCEEEEeCC---------CC---CCccccccccCCcEEEECCcccccc
Q 009604 288 SLFFTESPTNPF----LRCVDVKLVSDLCHKKGAIVCIDGT---------FA---TPLNQKALSLGADLVLHSATKFIGG 351 (531)
Q Consensus 288 klV~lesP~NPt----G~v~dl~~I~~la~~~gi~lIvD~a---------~a---~~~~~~~l~~gaDivv~S~sK~lgg 351 (531)
++|++++++|++ +...|+++|+++||++|+++++|+. |+ .+..++++++|+|++++|++|+++|
T Consensus 218 klV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgG 297 (464)
T PRK04311 218 ALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGG 297 (464)
T ss_pred eEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccC
Confidence 999999999983 4678999999999999999999994 21 2333566778999999999999998
Q ss_pred CCCceEEEEEeChHHHHHHHH--H---hhhcCCCchHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009604 352 HNDVLAGSISGSGKLVTQIRN--L---HHVLGGALNPN-----------AAYLIIRGMKTLHLRVQQQNSTALRMAKILE 415 (531)
Q Consensus 352 ~g~v~gG~iv~~~~li~~l~~--~---~~~~G~~~s~~-----------~a~l~l~~L~tl~~r~~~~~~na~~La~~L~ 415 (531)
+. +|+++++++++++++. + .+.-+.+++++ .++..++.+++|..|++++.+++++++++|+
T Consensus 298 p~---~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~ 374 (464)
T PRK04311 298 PQ---AGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALK 374 (464)
T ss_pred Cc---eEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 84 8999999999887763 1 11123334443 3444556778899999999999999999999
Q ss_pred cCC
Q 009604 416 AHP 418 (531)
Q Consensus 416 ~~p 418 (531)
+++
T Consensus 375 ~~~ 377 (464)
T PRK04311 375 AAL 377 (464)
T ss_pred hcc
Confidence 875
No 90
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=5e-21 Score=202.24 Aligned_cols=259 Identities=14% Similarity=0.158 Sum_probs=174.7
Q ss_pred cEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhc-cCCCcEE
Q 009604 217 STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAAL-NNNNVSL 289 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al-~~~~tkl 289 (531)
+.|++++|+ +++.+++.+++++||+|+++.|.|.... ..++..|+++..++. .|+++|++++ ++ ++++
T Consensus 104 ~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~-~~~~ 178 (380)
T PLN03026 104 ENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYV----FDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETH-KPKL 178 (380)
T ss_pred hhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeecCCCCCcCHHHHHHHHhcc-CCcE
Confidence 345556665 8999999999999999999999986422 334456888777753 3689999988 55 5999
Q ss_pred EEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc----ccc-ccCCcEEEECCccccccCCCceEEEEEeCh
Q 009604 290 FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SLGADLVLHSATKFIGGHNDVLAGSISGSG 364 (531)
Q Consensus 290 V~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~----~~l-~~gaDivv~S~sK~lgg~g~v~gG~iv~~~ 364 (531)
|++++|+||||.+++.+++.++++.. ++||+||+|...... ... .....+++.|+||.+|..|. ..|++++++
T Consensus 179 v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGl-RiGy~~~~~ 256 (380)
T PLN03026 179 LFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGL-RVGYGAFPL 256 (380)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccc-cceeeecCH
Confidence 99999999999999999999999865 899999998643211 111 22345899999999986664 478999999
Q ss_pred HHHHHHHHHhhhcCCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhc
Q 009604 365 KLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM 441 (531)
Q Consensus 365 ~li~~l~~~~~~~G~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~ 441 (531)
++++.+......++ .+......+...| +.+....+...++++.+.+.|++++.+. + +|.
T Consensus 257 ~~i~~l~~~~~~~~--~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~-------------- 318 (380)
T PLN03026 257 SIIEYLWRAKQPYN--VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLE-P-YPS-------------- 318 (380)
T ss_pred HHHHHHHHhcCCCC--CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCe-E-CCC--------------
Confidence 99988876654333 3333333333334 3333334445566777888888765432 2 332
Q ss_pred CCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHH
Q 009604 442 TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLK 521 (531)
Q Consensus 442 ~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli 521 (531)
.++++++.++.+ ....+|.+.|...++.+..+.. .+ .++++|||+|.. +..
T Consensus 319 --~~~f~~~~~~~~-~~~~~~~~~l~~~gI~v~~~~~----------------------~~-~~~~lRis~~~~---~~~ 369 (380)
T PLN03026 319 --DANFILCRVTSG-RDAKKLKEDLAKMGVMVRHYNS----------------------KE-LKGYIRVSVGKP---EHT 369 (380)
T ss_pred --CCeEEEEECCCC-CCHHHHHHHHHHCCeEEEECCC----------------------CC-CCCEEEEecCCH---HHH
Confidence 367888888632 2345666666555665554311 01 246899999943 334
Q ss_pred HHHHHHHH
Q 009604 522 ADVLQALH 529 (531)
Q Consensus 522 ~dL~~AL~ 529 (531)
+.|.++|+
T Consensus 370 ~~l~~al~ 377 (380)
T PLN03026 370 DALMEALK 377 (380)
T ss_pred HHHHHHHH
Confidence 45555554
No 91
>PRK07682 hypothetical protein; Validated
Probab=99.89 E-value=3.4e-21 Score=202.99 Aligned_cols=268 Identities=12% Similarity=0.135 Sum_probs=175.9
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCcEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNVSL 289 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~tkl 289 (531)
+++++++|++|+.+++.+++++||+|++++|+|......+ +..|.++..++. .|+++|++++++ ++++
T Consensus 83 ~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ 157 (378)
T PRK07682 83 EIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLV----TLAGGVPVPVATTLENEFKVQPAQIEAAITA-KTKA 157 (378)
T ss_pred cEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHH----HHcCCEEEEeecCCccCCCCCHHHHHhhcCc-ccEE
Confidence 5666666679999999999999999999999998654333 334665555532 378999999987 4999
Q ss_pred EEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcccc------cc-c-cCCcEEEECCccccccCCCceEE
Q 009604 290 FFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK------AL-S-LGADLVLHSATKFIGGHNDVLAG 358 (531)
Q Consensus 290 V~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~------~l-~-~gaDivv~S~sK~lgg~g~v~gG 358 (531)
|++++|+||||.+++ +++|.++|+++|+++|+|++|....... .+ . ....+++.|+||.++.+|. ..|
T Consensus 158 v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~G 236 (378)
T PRK07682 158 ILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGW-RLG 236 (378)
T ss_pred EEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhh-hhh
Confidence 999999999999986 7788999999999999999987543211 11 1 1345899999999986553 368
Q ss_pred EEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 359 SISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 359 ~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
++++++++++.+...........+......+...++ .+....++..++++.+.+.|+++ ++. +..|.
T Consensus 237 ~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~------- 307 (378)
T PRK07682 237 FIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLT-CHVPG------- 307 (378)
T ss_pred hhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCC-------
Confidence 888999999988766543333334444343333443 23333445567777788888875 321 11121
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 513 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG 513 (531)
.|.++++.++........|.+.| +..++.+..|..+. + -.++.||||++
T Consensus 308 ---------g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~----~-----------------~~~~~iRis~~ 357 (378)
T PRK07682 308 ---------GAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFG----E-----------------SGEGFIRCSYA 357 (378)
T ss_pred ---------eeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhC----c-----------------CCCCeEEEEeC
Confidence 23456666642112345666664 34577776664321 0 02578999999
Q ss_pred CC--CHHHHHHHHHHHHH
Q 009604 514 VE--DFEDLKADVLQALH 529 (531)
Q Consensus 514 lE--~~edli~dL~~AL~ 529 (531)
.+ +.++.++.|.++|+
T Consensus 358 ~~~~~l~~~l~~l~~~l~ 375 (378)
T PRK07682 358 TSLEQLQEAMKRMKRFVE 375 (378)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 73 22334444445443
No 92
>PRK07337 aminotransferase; Validated
Probab=99.89 E-value=7.5e-21 Score=201.12 Aligned_cols=266 Identities=18% Similarity=0.178 Sum_probs=176.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
++++++++++++|+.+++.+++++||+|+++.|+|......+ +..|.++..++. .|++++++.+++ ++
T Consensus 90 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 164 (388)
T PRK07337 90 PERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFV----AAAEGRPVLVPSGPAERFQLTAADVEAAWGE-RT 164 (388)
T ss_pred hHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEeecCCccCCcCCHHHHHhhcCc-cc
Confidence 356677777779999999999999999999999999866444 334666665542 368999999987 48
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc----ccccccCCc-EEEECCccccccCCCceEEE
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSLGAD-LVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~----~~~l~~gaD-ivv~S~sK~lgg~g~v~gG~ 359 (531)
++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... .....++.+ +++.|+||.++.+|.+ .|+
T Consensus 165 ~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R-iG~ 243 (388)
T PRK07337 165 RGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWR-LGW 243 (388)
T ss_pred eEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhh-eee
Confidence 99999999999999986 67888889999999999999864321 112223333 5688999999877754 789
Q ss_pred EEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 360 ISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
+++++++++.+.......+...+.....++...+ +.+....++..++++.+.+.|+++ ++.....|.
T Consensus 244 ~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~------- 315 (388)
T PRK07337 244 LVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPD------- 315 (388)
T ss_pred eecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCC-------
Confidence 9999988888877665544444443333333333 223333344456667777888775 221111221
Q ss_pred hhhhhhcCCcccEEEEEEcCC----HHHHHHHHHH-cCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEE
Q 009604 435 HIATQQMTGFGGVVSFEVDGD----LTATIKFIDA-LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 509 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~----~~~~~~fl~~-L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIR 509 (531)
.|..++++++.. ......|.+. ++..++.+..|..+.. .-.++++|
T Consensus 316 ---------~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~--------------------~~~~~~~R 366 (388)
T PRK07337 316 ---------GAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGP--------------------HAPRDYIR 366 (388)
T ss_pred ---------eeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCC--------------------CCCCCEEE
Confidence 467888888631 1123455554 4455666666644311 00257999
Q ss_pred EEecCCCHHHHHHHH
Q 009604 510 FSFGVEDFEDLKADV 524 (531)
Q Consensus 510 lSvGlE~~edli~dL 524 (531)
|++|. +.+++.+.|
T Consensus 367 i~~~~-~~~~l~~~l 380 (388)
T PRK07337 367 LSYAT-SMSRLEEAV 380 (388)
T ss_pred EEecC-CHHHHHHHH
Confidence 99997 444444443
No 93
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.89 E-value=1.1e-20 Score=197.21 Aligned_cols=237 Identities=17% Similarity=0.184 Sum_probs=161.7
Q ss_pred CCcEEEeCChH-HHHHHHHHHhccCC---CEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhcc
Q 009604 215 AESTVIMASGM-SASTVMLLALVPAG---GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALN 283 (531)
Q Consensus 215 ~e~~i~~sSG~-~Ai~~al~all~pG---D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~ 283 (531)
.+..|++++|+ +++..++.+++++| |+|+++.|+|...... ++..|+++..++. .|+++++++++
T Consensus 59 ~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~ 134 (350)
T TIGR03537 59 PDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERG----ALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL 134 (350)
T ss_pred CCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHH----HHhcCCEEEEcccCcccCCccCHHHHHHhhh
Confidence 34245555555 99999999999887 6999999999886543 4456888776653 27899999887
Q ss_pred CCCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcccc----cc--ccCCcEEEECCccccccCCC
Q 009604 284 NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL--SLGADLVLHSATKFIGGHND 354 (531)
Q Consensus 284 ~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~----~l--~~gaDivv~S~sK~lgg~g~ 354 (531)
+ ++|+|++++|+||||.+.+ +++|.++|+++|+++|+|++|....... .. .....+++.|+||.++.+|.
T Consensus 135 ~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~Gl 213 (350)
T TIGR03537 135 E-ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGY 213 (350)
T ss_pred h-ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccc
Confidence 7 4999999999999999998 7888999999999999999987542211 11 12234889999999987764
Q ss_pred ceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCC
Q 009604 355 VLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSH 431 (531)
Q Consensus 355 v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~ 431 (531)
..|++++++++.+.++.....++...+.....++...+ +.+..+.++..++...+.+.|+++ ++ .+..|.
T Consensus 214 -RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~-~~~~~~---- 286 (350)
T TIGR03537 214 -RSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GL-EYLYPD---- 286 (350)
T ss_pred -cceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CC-cccCCC----
Confidence 46788888889888887665555444433322222222 233344455566677777888765 22 122111
Q ss_pred chhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccC
Q 009604 432 PEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 476 (531)
Q Consensus 432 p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~G 476 (531)
.|.++++.++.. ....++.+.|...++.+..|
T Consensus 287 ------------g~~~~~~~~~~~-~~~~~l~~~L~~~gv~v~~g 318 (350)
T TIGR03537 287 ------------ATFYLWVKVPSG-IDAKDYALRLLENGIVVAPG 318 (350)
T ss_pred ------------eEEEEEEECCCC-CCHHHHHHHHHHCCEEEcCc
Confidence 234578888643 23456777775556655555
No 94
>PRK07550 hypothetical protein; Provisional
Probab=99.89 E-value=6.8e-21 Score=201.32 Aligned_cols=259 Identities=14% Similarity=0.109 Sum_probs=174.0
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-------CHHHHHHhccCCCcE
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------DMEGLEAALNNNNVS 288 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-------d~e~Le~al~~~~tk 288 (531)
+++++++++++|+.+++.+++++||+|+++.|+|..... .++..|+++..++.+ |++++++++++ +++
T Consensus 91 ~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~ 165 (386)
T PRK07550 91 EQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKM----WLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP-RTR 165 (386)
T ss_pred ceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc-cCc
Confidence 444444444689999999999999999999999987553 345568887777642 67889999987 489
Q ss_pred EEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc-----ccccc---cC-CcEEEECCccccccCCCce
Q 009604 289 LFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS---LG-ADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 289 lV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~-----~~~l~---~g-aDivv~S~sK~lgg~g~v~ 356 (531)
+|++++|+||||.+++ +++|+++|+++|++||+|++|+.... ..... .+ ..+++.|+||.++.+|. .
T Consensus 166 ~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-R 244 (386)
T PRK07550 166 AIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGH-R 244 (386)
T ss_pred EEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCccc-c
Confidence 9999999999999987 67899999999999999999864321 11111 11 24779999999985553 4
Q ss_pred EEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCc
Q 009604 357 AGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH----LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHP 432 (531)
Q Consensus 357 gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~----~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p 432 (531)
.|++++++++++.+.......+...+....+.+...++.+. ...++..++++.+.+.|.+++.+. + .|.
T Consensus 245 iG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~----- 317 (386)
T PRK07550 245 VGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWE-L-LAS----- 317 (386)
T ss_pred eEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCce-e-CCC-----
Confidence 78999998888888776655544445444444444443322 222344566677788888764331 1 111
Q ss_pred hhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE
Q 009604 433 EHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS 511 (531)
Q Consensus 433 ~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlS 511 (531)
.|.++++.++.......+|.+.| +..++.+..|..+.. ..++.|||+
T Consensus 318 -----------g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRis 365 (386)
T PRK07550 318 -----------GAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGP---------------------GQEGYLRLA 365 (386)
T ss_pred -----------ceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCC---------------------CCCCEEEEE
Confidence 35677888763112345666664 445666666644310 024689999
Q ss_pred ecCCCHHH
Q 009604 512 FGVEDFED 519 (531)
Q Consensus 512 vGlE~~ed 519 (531)
++..+.++
T Consensus 366 ~~~~~~~~ 373 (386)
T PRK07550 366 FANADVAG 373 (386)
T ss_pred eecCCHHH
Confidence 99765433
No 95
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.89 E-value=3.5e-21 Score=200.99 Aligned_cols=266 Identities=18% Similarity=0.224 Sum_probs=193.4
Q ss_pred CcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----CCHHHHHHhccCCCcEEE
Q 009604 216 ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 216 e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~d~e~Le~al~~~~tklV 290 (531)
.+.|+.++|+ +.|..++++++.+||.|+++.|+|.... ..++..|+++..++. .|++.+.+++++ ++++|
T Consensus 75 ~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~----~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~-~~~lv 149 (356)
T COG0079 75 PENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYE----IAAQLAGAEVVKVPLKEFRLDLDAILAAIRD-KTKLV 149 (356)
T ss_pred cceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHH----HHHHhcCCeEEEecccccccCHHHHHHhhhc-CCCEE
Confidence 3677778888 8999999999999999999999886532 345667888887775 578999999987 59999
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHhc--CCEEEEeCCCCCCccccccc----cCCcEEEECCccccccCCCceEEEEEeCh
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALS----LGADLVLHSATKFIGGHNDVLAGSISGSG 364 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~~--gi~lIvD~a~a~~~~~~~l~----~gaDivv~S~sK~lgg~g~v~gG~iv~~~ 364 (531)
|++|||||||...+.++|.+++... +.+||+||+|..+.....+. ...-+++.||||.||-.|.+ .|+.++++
T Consensus 150 ~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlR-lGy~ia~~ 228 (356)
T COG0079 150 FLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLR-VGYAIANP 228 (356)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhc-eeeccCCH
Confidence 9999999999999988888887754 88999999988765522222 22248999999999987754 78899999
Q ss_pred HHHHHHHHHhhhcCCCchHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCC
Q 009604 365 KLVTQIRNLHHVLGGALNPNA-AYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTG 443 (531)
Q Consensus 365 ~li~~l~~~~~~~G~~~s~~~-a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g 443 (531)
++++.+++.+..+........ +..+++.-+.+..+.++..+.++++.+.|++++ +..| +|+
T Consensus 229 ~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v-~pS---------------- 290 (356)
T COG0079 229 ELIAALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGV-FPS---------------- 290 (356)
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCee-cCC----------------
Confidence 999999998877654332222 222223335667777888888999999999876 4332 343
Q ss_pred cccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHH
Q 009604 444 FGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED-FEDLKA 522 (531)
Q Consensus 444 ~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~-~edli~ 522 (531)
.+|++.+.++. .+ ...+.+.|...++.+..-+. .+..++++|||||.++ .+.+++
T Consensus 291 ~aNFvlv~~~~-~~-~~~l~~~L~~~giivR~~~~----------------------~~~~~~~lRitvgt~een~~ll~ 346 (356)
T COG0079 291 QANFVLVRVPD-AE-AAALAEALLKKGILVRDCSS----------------------VGLLPGYLRITVGTPEENDRLLA 346 (356)
T ss_pred CCcEEEEECCC-cc-HHHHHHHHHHCCEEEEeCCC----------------------CCCCCCeEEEEeCCHHHHHHHHH
Confidence 36788888864 23 55666777554543331100 1234689999999754 466777
Q ss_pred HHHHHHH
Q 009604 523 DVLQALH 529 (531)
Q Consensus 523 dL~~AL~ 529 (531)
.|.+.++
T Consensus 347 AL~~~~~ 353 (356)
T COG0079 347 ALREVLK 353 (356)
T ss_pred HHHHHHh
Confidence 7766554
No 96
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.89 E-value=8.3e-21 Score=197.98 Aligned_cols=271 Identities=17% Similarity=0.150 Sum_probs=184.0
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCcEEEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tklV~ 291 (531)
.++++++|++|+.+++.+++++||+|+++.+.|.+.. +...++..|.++.+++. .|+++++++++++++++|+
T Consensus 52 ~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~ 129 (356)
T cd06451 52 TFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVT 129 (356)
T ss_pred EEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEE
Confidence 4667888899999999999999999999988776632 22345566888777753 3789999999763489999
Q ss_pred EeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHH
Q 009604 292 TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI 370 (531)
Q Consensus 292 lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l 370 (531)
+++|+||+|.+.|+++|.++|+++|+++++|++++.+. ..+....++|+++.|++|+++++.+ +|+++.++++++.+
T Consensus 130 i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g--~G~l~~~~~~~~~~ 207 (356)
T cd06451 130 LTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPG--LGPIAFSERALERI 207 (356)
T ss_pred EeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccCCCC--cceeEECHHHHHHH
Confidence 99999999999999999999999999999999976432 3344456899999999999997643 58999988887776
Q ss_pred HH---Hhh----------------hcCCCchHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 371 RN---LHH----------------VLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 371 ~~---~~~----------------~~G~~~s~~~a~l~l~~L~t-----l~~r~~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
.. ... ..+.+.+....+.+..+++. +....++..+++..+.+.|++. ++. +..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~ 285 (356)
T cd06451 208 KKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLK-LLAK 285 (356)
T ss_pred HhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCe-eccC
Confidence 53 000 11122233222222223332 2333445556777788888764 332 1111
Q ss_pred CCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-CcccccCCcccccccCccccccCCCHHHHHhcCCCC
Q 009604 427 GLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 505 (531)
Q Consensus 427 gl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~-~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~ 505 (531)
+. ...+.++.+.++.+ .....+.+.|... ++.++.|.. + ..+
T Consensus 286 --~~-----------~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gI~~~~g~~------~-----------------~~~ 328 (356)
T cd06451 286 --PE-----------LRSPTVTAVLVPEG-VDGDEVVRRLMKRYNIEIAGGLG------P-----------------TAG 328 (356)
T ss_pred --cc-----------cCCCceEEEECCCC-CCHHHHHHHHHHhCCEEEecccc------c-----------------ccC
Confidence 10 01234455666532 2345677777554 655554421 0 014
Q ss_pred CeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 506 NLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 506 ~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+.||+|++..++++.++.+.++|+.
T Consensus 329 ~~iRis~~~~~~~e~v~~~~~~l~~ 353 (356)
T cd06451 329 KVFRIGHMGEATREDVLGVLSALEE 353 (356)
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHH
Confidence 6899999998888888888888865
No 97
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=6.5e-21 Score=199.23 Aligned_cols=259 Identities=19% Similarity=0.257 Sum_probs=177.5
Q ss_pred EEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCcEEEE
Q 009604 218 TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 218 ~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tklV~ 291 (531)
.|++++|+ +++.+++.+++++||+|+++.|.|.... ..++..|+++..++. .|+++|++++++.++++|+
T Consensus 83 ~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~ 158 (356)
T PRK04870 83 DVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYR----MSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVF 158 (356)
T ss_pred cEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHH----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEE
Confidence 56667776 8999999999999999999999988643 345566888877753 3789999998654599999
Q ss_pred EeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc---c-cccCCcEEEECCccccccCCCceEEEEEeChHHH
Q 009604 292 TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV 367 (531)
Q Consensus 292 lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~---~-l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li 367 (531)
+++|+||||.+++.+++.++++..++++|+|++|....... . ......+++.|+|| ++.+|.+ .|+++++++++
T Consensus 159 l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlR-iG~~i~~~~~i 236 (356)
T PRK04870 159 LAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLR-LGYLAGHPAWI 236 (356)
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHh-hhhhhCCHHHH
Confidence 99999999999999999888887788999999986432111 1 12234589999999 6666544 78889999998
Q ss_pred HHHHHHhhhcCCCchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCc
Q 009604 368 TQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGF 444 (531)
Q Consensus 368 ~~l~~~~~~~G~~~s~~~a~l~l~~---L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~ 444 (531)
+.++.....++ .+....+.+... .+.+....++..++++.+.+.|++.+++. + +|. .
T Consensus 237 ~~~~~~~~~~~--~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~----------------~ 296 (356)
T PRK04870 237 AELDKVRPPYN--VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVT-V-FPS----------------A 296 (356)
T ss_pred HHHHHccCCCc--CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCC----------------C
Confidence 88876543222 333322222222 33444455666677888888888776652 2 231 3
Q ss_pred ccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009604 445 GGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 524 (531)
Q Consensus 445 g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL 524 (531)
|+++++.++ + ...+.+.|+..++.+..|..+. +..++++|||++. .+..+.|
T Consensus 297 ~~~~~~~~~-~---~~~~~~~l~~~gI~v~~~~~f~---------------------~~~~~~iRis~~~---~~~~~~l 348 (356)
T PRK04870 297 ANFILVRVP-D---AAAVFDGLKTRGVLVKNLSGMH---------------------PLLANCLRVTVGT---PEENAQF 348 (356)
T ss_pred CeEEEEECC-C---HHHHHHHHHHCCEEEEECCCCC---------------------CCCCCeEEEeCCC---HHHHHHH
Confidence 568888886 2 2456666666666666553220 0125789999995 3445555
Q ss_pred HHHHHh
Q 009604 525 LQALHA 530 (531)
Q Consensus 525 ~~AL~~ 530 (531)
.+||++
T Consensus 349 ~~al~~ 354 (356)
T PRK04870 349 LAALKA 354 (356)
T ss_pred HHHHHH
Confidence 555553
No 98
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.88 E-value=8.4e-21 Score=200.77 Aligned_cols=261 Identities=15% Similarity=0.119 Sum_probs=169.1
Q ss_pred CCcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCC
Q 009604 215 AESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNN 286 (531)
Q Consensus 215 ~e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~ 286 (531)
+++.|++++|+ +++.+++.+++++||+|+++.|+|..... .++..|+++..++. .|++++++.+.+ +
T Consensus 91 ~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~ 165 (388)
T PRK07366 91 PETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAG----GVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA-Q 165 (388)
T ss_pred CcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc-c
Confidence 34346666665 99999999999999999999999988653 34445777766643 256788777766 4
Q ss_pred cEEEEEeCCCCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCCccc------ccccc----CCcEEEECCccccccCC
Q 009604 287 VSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ------KALSL----GADLVLHSATKFIGGHN 353 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~~~~------~~l~~----gaDivv~S~sK~lgg~g 353 (531)
+|+|++++|+||||.+++. ++|+++|+++|++||+||+|...... ..... ...+++.|+||.+|.+|
T Consensus 166 ~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~G 245 (388)
T PRK07366 166 ARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGG 245 (388)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcc
Confidence 8999999999999999975 56777899999999999998654321 11111 12378899999998776
Q ss_pred CceEEEEEeChHHHHHHHHHhhhcCCCc-hHH-HHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCC
Q 009604 354 DVLAGSISGSGKLVTQIRNLHHVLGGAL-NPN-AAY-LIIR-GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 429 (531)
Q Consensus 354 ~v~gG~iv~~~~li~~l~~~~~~~G~~~-s~~-~a~-l~l~-~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~ 429 (531)
.+ .|++++++++++.+.......+... +.. .+. ..+. .-+.+....+...++.+.+.+.|+++ ++ .+..|.
T Consensus 246 lR-iG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~-~~~~p~-- 320 (388)
T PRK07366 246 FR-IGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GW-PVPLPE-- 320 (388)
T ss_pred hh-heehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CC-cccCCC--
Confidence 54 7888899999998887665444322 211 111 1111 11233333444556677777888765 22 122222
Q ss_pred CCchhhhhhhhcCCcccEEEEEEcCCH-HHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009604 430 SHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 507 (531)
Q Consensus 430 s~p~~~l~~~~~~g~g~ivsf~l~g~~-~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~l 507 (531)
.|..+++.+++.. ....+|.+.+ +..++.+..|..+. +..+++
T Consensus 321 --------------~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~---------------------~~~~~~ 365 (388)
T PRK07366 321 --------------ATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFG---------------------KSGEGY 365 (388)
T ss_pred --------------eeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhC---------------------cCCCCe
Confidence 4678899886421 1234565554 44566666653321 012478
Q ss_pred EEEEecCCCHHHHH
Q 009604 508 VRFSFGVEDFEDLK 521 (531)
Q Consensus 508 IRlSvGlE~~edli 521 (531)
|||+++. +.+++.
T Consensus 366 iRi~~~~-~~~~l~ 378 (388)
T PRK07366 366 VRFALVH-DPDILE 378 (388)
T ss_pred EEEEecC-CHHHHH
Confidence 9999985 343333
No 99
>PLN02187 rooty/superroot1
Probab=99.88 E-value=1.3e-20 Score=203.96 Aligned_cols=270 Identities=16% Similarity=0.147 Sum_probs=174.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCC
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNN 286 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~ 286 (531)
.+++++++++++++|.+++.++++|||+|+++.|+|.... ..+...|+++..++. .|+++|+++++++
T Consensus 130 ~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~----~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~- 204 (462)
T PLN02187 130 TPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYD----ARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADEN- 204 (462)
T ss_pred CcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHH----HHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCC-
Confidence 3456666666679999999999999999999999998744 234556777776643 2789999998874
Q ss_pred cEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----ccc-cc---CCcEEEECCccccccCCCc
Q 009604 287 VSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SL---GADLVLHSATKFIGGHNDV 355 (531)
Q Consensus 287 tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~l-~~---gaDivv~S~sK~lgg~g~v 355 (531)
+++|++++|+||||.+++ +++|+++|+++|++||+||+|...... .++ .+ ..-+++.|+||.|+.+|.+
T Consensus 205 ~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlR 284 (462)
T PLN02187 205 TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWK 284 (462)
T ss_pred cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccce
Confidence 899999999999999997 678888899999999999998753221 111 11 1247889999999988865
Q ss_pred eEEEEEe-ChH-H---HHHHHHHhhhcCC--CchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcCCCceEE
Q 009604 356 LAGSISG-SGK-L---VTQIRNLHHVLGG--ALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAHPKVKRV 423 (531)
Q Consensus 356 ~gG~iv~-~~~-l---i~~l~~~~~~~G~--~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~~p~v~~V 423 (531)
.|++++ +++ + ++.+......++. ..+.+...++...+ +.+....+...++++.+.+.|++++.+..+
T Consensus 285 -iG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~ 363 (462)
T PLN02187 285 -IGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCP 363 (462)
T ss_pred -eEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCC
Confidence 667776 333 2 3455444443322 22333333333333 234444556667788888999876543211
Q ss_pred eCCCCCCCchhhhhhhhcCCcccEEEEEEcC----CHHHHHHHHH-HcCCCCcccccCCcccccccCccccccCCCHHHH
Q 009604 424 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DLTATIKFID-ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 498 (531)
Q Consensus 424 ~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g----~~~~~~~fl~-~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~ 498 (531)
..|. .|..+++.++. +......|+. .++..++.+..|..+
T Consensus 364 ~~P~----------------gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~f------------------- 408 (462)
T PLN02187 364 KKPE----------------SCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDAL------------------- 408 (462)
T ss_pred CCCC----------------EeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECcccc-------------------
Confidence 1221 35677776642 1111233433 335556666666432
Q ss_pred HhcCCCCCeEEEEecCCC--HHHHHHHHHHHH
Q 009604 499 LKYGIMDNLVRFSFGVED--FEDLKADVLQAL 528 (531)
Q Consensus 499 ~~~gi~~~lIRlSvGlE~--~edli~dL~~AL 528 (531)
| .+++|||++|.++ .++-++.|.+.+
T Consensus 409 ---g-~~~~iRis~~~~~e~l~~al~rL~~~l 436 (462)
T PLN02187 409 ---G-LKNWMRITIGVEAHMLEDALERLKGFC 436 (462)
T ss_pred ---C-CCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 1 1578999999742 234444455544
No 100
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.88 E-value=3.8e-21 Score=198.65 Aligned_cols=265 Identities=19% Similarity=0.155 Sum_probs=184.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----CCHHHHHHhccC------
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNN------ 284 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~d~e~Le~al~~------ 284 (531)
.++.+++++|++++.+++.+++++||+|+++.+.|...+... ......|+++..++. .|+++|++++++
T Consensus 47 ~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~ 125 (338)
T cd06502 47 KEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAG-APEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDDIHF 125 (338)
T ss_pred CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCC-cHHHHcCceEEeecCCCCcCCHHHHHHHhhccCCCcC
Confidence 357899999999999999999999999999999987654211 112235888877764 478999999874
Q ss_pred CCcEEEEEeCCCCCCCcc---cCHHHHHHHHHhcCCEEEEeCCCCCC------ccccccccCCcEEEECCccccccCCCc
Q 009604 285 NNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDV 355 (531)
Q Consensus 285 ~~tklV~lesP~NPtG~v---~dl~~I~~la~~~gi~lIvD~a~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v 355 (531)
.++++|++++|+|| |.+ .++++|+++|+++|+++|+|++|..+ ........++|+++.|+||+++..+
T Consensus 126 ~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~-- 202 (338)
T cd06502 126 PPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPV-- 202 (338)
T ss_pred CcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCcc--
Confidence 14899999999998 544 35778999999999999999986321 1112233478999999999998765
Q ss_pred eEEEEEeChHHHHHHHHHhhhcCC--CchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCC
Q 009604 356 LAGSISGSGKLVTQIRNLHHVLGG--ALNPNAAYLIIRGMKT--LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSH 431 (531)
Q Consensus 356 ~gG~iv~~~~li~~l~~~~~~~G~--~~s~~~a~l~l~~L~t--l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~ 431 (531)
|+++++++++++.++.....++. ..++..++.+...|+. ...+.++..++++++.+.|++++. . .+|.
T Consensus 203 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~-~~~~---- 274 (338)
T cd06502 203 -GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGG--L-ESEV---- 274 (338)
T ss_pred -ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCC--C-cccc----
Confidence 55667888898888776554443 2344555555555544 445567777888889999987643 1 1221
Q ss_pred chhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcC---CCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009604 432 PEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK---IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 508 (531)
Q Consensus 432 p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~---~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lI 508 (531)
.++++.+.++++.....++.+.+. ..++.+. + ...+.|
T Consensus 275 ------------~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~----------~-----------------~~~~~l 315 (338)
T cd06502 275 ------------QTNIVLLDPVEANAVFVELSKEAIERRGEGVLFY----------A-----------------WGEGGV 315 (338)
T ss_pred ------------cCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEE----------e-----------------cCCCeE
Confidence 357888877644344455555542 1121110 0 012689
Q ss_pred EEEecCCCHHHHHHHHHHHHHh
Q 009604 509 RFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 509 RlSvGlE~~edli~dL~~AL~~ 530 (531)
||++++.++++.++.+.++|+.
T Consensus 316 Ri~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 316 RFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred EEEeecCCCHHHHHHHHHHHhc
Confidence 9999999889889999888875
No 101
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.88 E-value=2.7e-20 Score=199.85 Aligned_cols=264 Identities=18% Similarity=0.181 Sum_probs=170.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
.+++++++++++||.+++.+++++||+|+++.|.|..... .....|+++.+++. .|+++|+++++++ +
T Consensus 117 ~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~ 191 (430)
T PLN00145 117 TDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEA----RAVFSGLEVRHFDLLPERGWEVDLEGVEALADEN-T 191 (430)
T ss_pred hhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcC-c
Confidence 4667777777899999999999999999999999987432 23345777777653 3789999998874 9
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----ccc-c---cCCcEEEECCccccccCCCce
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-S---LGADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~l-~---~gaDivv~S~sK~lgg~g~v~ 356 (531)
++|++++|+||||.+++ +++|+++|+++|++||+|++|...... .++ . ...-+++.|+||.++.+|.+
T Consensus 192 ~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~R- 270 (430)
T PLN00145 192 VAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWR- 270 (430)
T ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCee-
Confidence 99999999999999998 778888899999999999998653211 111 1 12348999999999988866
Q ss_pred EEEEEe--ChHHHH------HHHHHhhhcCCCchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcCCCceEE
Q 009604 357 AGSISG--SGKLVT------QIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAHPKVKRV 423 (531)
Q Consensus 357 gG~iv~--~~~li~------~l~~~~~~~G~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~~p~v~~V 423 (531)
.|++++ ++.+++ .++.... .....+.+..+.+...+ +.+...+++..++++.+.+.|++++.+..+
T Consensus 271 lG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~ 349 (430)
T PLN00145 271 LGWIATCDPNGILKETKVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCP 349 (430)
T ss_pred EEEEEEecchhhhhhhHHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 566664 334433 2222222 22222333333322233 234455566667778888888876654322
Q ss_pred eCCCCCCCchhhhhhhhcCCcccEEEEEEcCC----HHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHH
Q 009604 424 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 498 (531)
Q Consensus 424 ~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~----~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~ 498 (531)
..|. .+..+++.++.. ......|+..| +..++.+-.|..+
T Consensus 350 ~~P~----------------ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~f------------------- 394 (430)
T PLN00145 350 HKPE----------------GSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSAL------------------- 394 (430)
T ss_pred cCCC----------------eeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCcccc-------------------
Confidence 2332 355677777521 11234455433 3445555444321
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009604 499 LKYGIMDNLVRFSFGVEDFEDLKADVL 525 (531)
Q Consensus 499 ~~~gi~~~lIRlSvGlE~~edli~dL~ 525 (531)
| .++++|||++. +.+++.+.|+
T Consensus 395 ---g-~~~~lRis~~~-~~~~l~~al~ 416 (430)
T PLN00145 395 ---G-MKNWLRITFAI-DPPSLEDGLE 416 (430)
T ss_pred ---C-CCCeEEEEeCC-CHHHHHHHHH
Confidence 2 14799999996 4444444433
No 102
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.88 E-value=2e-20 Score=194.51 Aligned_cols=268 Identities=18% Similarity=0.187 Sum_probs=189.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCC---CcEEE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNN---NVSLF 290 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~---~tklV 290 (531)
+.++.+++++|++++..++.+++++||+|+++.+.|...... ++..|+++..++..|+++|++.+++. ++++|
T Consensus 75 ~~~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v 150 (360)
T TIGR00858 75 GTEAALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDG----CRLSGARVRRYRHNDVEHLERLLEKNRGERRKLI 150 (360)
T ss_pred CCCCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHH----HHhcCCceEEecCCCHHHHHHHHHHcccCCCeEE
Confidence 456789999999888778888899999999999999876533 34557888888878999999988642 37999
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-cc--c------c-ccCCcEEEECCccccccCCCceEEEE
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QK--A------L-SLGADLVLHSATKFIGGHNDVLAGSI 360 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~--~------l-~~gaDivv~S~sK~lgg~g~v~gG~i 360 (531)
++++++|++|...|+++|.++|+++|++||+|++|..+.. .. . . ..+.|+++.|+||.+++. ||++
T Consensus 151 ~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----gG~~ 226 (360)
T TIGR00858 151 VTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSY----GAYV 226 (360)
T ss_pred EEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhcc----CcEE
Confidence 9999999999999999999999999999999999864321 11 0 1 136789999999999875 4889
Q ss_pred EeChHHHHHHHHHhhh--cCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhh
Q 009604 361 SGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHH 435 (531)
Q Consensus 361 v~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~ 435 (531)
++++++++.+...... .+...++.....+...++ ......++..++.+.+.+.|++++ +. + ++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~-~-~~--------- 294 (360)
T TIGR00858 227 AGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-FT-L-MP--------- 294 (360)
T ss_pred EcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-Cc-c-CC---------
Confidence 9998888877643322 222334443333333343 233445667778888888888753 21 1 11
Q ss_pred hhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009604 436 IATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 515 (531)
Q Consensus 436 l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE 515 (531)
..++++++.++. .....+|.+.|...++.+..+..... + -..+.||||++..
T Consensus 295 -------~~~~~~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~~---~-----------------~~~~~iRis~~~~ 346 (360)
T TIGR00858 295 -------SCTPIVPVIIGD-NASALALAEELQQQGIFVGAIRPPTV---P-----------------AGTSRLRLTLSAA 346 (360)
T ss_pred -------CCCCEEEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCCC---C-----------------CCCceEEEEEcCC
Confidence 135688888853 23456777777665666654322110 0 0135899999998
Q ss_pred CHHHHHHHHHHHHH
Q 009604 516 DFEDLKADVLQALH 529 (531)
Q Consensus 516 ~~edli~dL~~AL~ 529 (531)
++++.++.+.++|+
T Consensus 347 ~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 347 HTPGDIDRLAEALK 360 (360)
T ss_pred CCHHHHHHHHHhhC
Confidence 88888888877763
No 103
>PRK12414 putative aminotransferase; Provisional
Probab=99.88 E-value=1.7e-20 Score=198.33 Aligned_cols=265 Identities=13% Similarity=0.123 Sum_probs=171.5
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHHHHhccCCCcEE
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGLEAALNNNNVSL 289 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~~~~tkl 289 (531)
++++++++|++++..++.+++.+||+|+++.|+|......+ +..|.++..++. .|+++|++++++ ++++
T Consensus 91 ~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~ 165 (384)
T PRK12414 91 SEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIV----RLQGATPVAIKLSPEDFRVNWDEVAAAITP-RTRM 165 (384)
T ss_pred CcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHH----HHcCCEEEEEecCccccccCHHHHHhhcCc-ccEE
Confidence 45778888889999999999999999999999998754333 334666665543 378999999987 4999
Q ss_pred EEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc----ccccc-----cCCcEEEECCccccccCCCceE
Q 009604 290 FFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS-----LGADLVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 290 V~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~----~~~l~-----~gaDivv~S~sK~lgg~g~v~g 357 (531)
|++++|+||||.+++ +++|+++|+++|+++|+|++|..... ..++. .+..+++.|+||.++.+|. ..
T Consensus 166 v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl-Ri 244 (384)
T PRK12414 166 IIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGW-RV 244 (384)
T ss_pred EEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccc-eE
Confidence 999999999999874 77888899999999999999864321 11111 1234899999999986664 47
Q ss_pred EEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 358 GSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 358 G~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~t---l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
|++++++++++.+...........+.....++...++. .....+...++++.+.+.|+++ ++. +..|.
T Consensus 245 G~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~------- 315 (384)
T PRK12414 245 GYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFE-LLPSE------- 315 (384)
T ss_pred EEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCC-------
Confidence 89999999988887765433323333333333333321 1122334456677788888875 222 21111
Q ss_pred hhhhhhcCCcccEEEEEEcCC-HHHHHHHH-HHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe
Q 009604 435 HIATQQMTGFGGVVSFEVDGD-LTATIKFI-DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF 512 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl-~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSv 512 (531)
.|-++++.++.. ......++ +.++..++.+..|..+.. .+..+++|||++
T Consensus 316 ---------gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~-------------------~~~~~~~iRis~ 367 (384)
T PRK12414 316 ---------GSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYT-------------------DGTDTGLIRLSF 367 (384)
T ss_pred ---------cceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcC-------------------CCCCCCEEEEEe
Confidence 233555566421 11122333 445556777776644321 012257899999
Q ss_pred cCCCHHHHHHHH
Q 009604 513 GVEDFEDLKADV 524 (531)
Q Consensus 513 GlE~~edli~dL 524 (531)
+. +.+++.+.+
T Consensus 368 ~~-~~~~~~~~~ 378 (384)
T PRK12414 368 SK-DDATLVEGA 378 (384)
T ss_pred cC-CHHHHHHHH
Confidence 97 344444444
No 104
>PRK08068 transaminase; Reviewed
Probab=99.88 E-value=1.1e-20 Score=200.08 Aligned_cols=261 Identities=15% Similarity=0.082 Sum_probs=172.2
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-------CHHHHHHhccCCCcEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------DMEGLEAALNNNNVSL 289 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-------d~e~Le~al~~~~tkl 289 (531)
+++++++|++++..++.+++++||+|+++.|+|..... .++..|+++..++.+ |++++++.+++ ++++
T Consensus 96 ~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~ 170 (389)
T PRK08068 96 EVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLS----GVALARAQFETMPLIAENNFLPDYTKIPEEVAE-KAKL 170 (389)
T ss_pred cEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHhcCCEEEEeecccccCCCCCHHHHHHhccc-cceE
Confidence 45666666699999999999999999999999987543 334567777666532 57889888876 4999
Q ss_pred EEEeCCCCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCCccc--cc---cc----cCCcEEEECCccccccCCCceE
Q 009604 290 FFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ--KA---LS----LGADLVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 290 V~lesP~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~~~~--~~---l~----~gaDivv~S~sK~lgg~g~v~g 357 (531)
|++++|+||||.+++. ++|.++|+++|++||+||+|...... .+ .. ....+++.|+||.++..|. ..
T Consensus 171 v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl-Ri 249 (389)
T PRK08068 171 MYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW-RV 249 (389)
T ss_pred EEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccc-ee
Confidence 9999999999999986 57777899999999999998542111 11 11 1234899999999986664 47
Q ss_pred EEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCch
Q 009604 358 GSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 433 (531)
Q Consensus 358 G~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~ 433 (531)
|++++++++++.+......+....++.....+...+ +.+....++..++++.+.+.|+++ ++. +..|.
T Consensus 250 G~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~~~~~------ 321 (389)
T PRK08068 250 AFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWE-VDAPK------ 321 (389)
T ss_pred EeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCC------
Confidence 888899999998877665544333332222222222 334444555666777788888775 221 21111
Q ss_pred hhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe
Q 009604 434 HHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF 512 (531)
Q Consensus 434 ~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~-~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSv 512 (531)
.|.++++.+++. .....|.+.|. ..++.+..|..+.. ..++.|||++
T Consensus 322 ----------g~~~~~v~~~~~-~~~~~~~~~l~~~~gi~v~pg~~f~~---------------------~~~~~iRi~~ 369 (389)
T PRK08068 322 ----------GSFFAWMPVPKG-YTSEQFADLLLEKAHVAVAPGNGFGE---------------------HGEGYVRVGL 369 (389)
T ss_pred ----------eeEEEEEECCCC-CCHHHHHHHHHHhCCEEEecchHhCc---------------------cCCCeEEEEE
Confidence 234578888643 23456666664 24666655533210 1247899999
Q ss_pred cCCCHHHHHHHH
Q 009604 513 GVEDFEDLKADV 524 (531)
Q Consensus 513 GlE~~edli~dL 524 (531)
+.+ .+.+.+.+
T Consensus 370 ~~~-~~~l~~al 380 (389)
T PRK08068 370 LTD-EERLREAV 380 (389)
T ss_pred cCC-HHHHHHHH
Confidence 964 34443333
No 105
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.88 E-value=1.6e-20 Score=198.35 Aligned_cols=262 Identities=17% Similarity=0.172 Sum_probs=170.3
Q ss_pred CcEEEeCCh-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 216 ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 216 e~~i~~sSG-~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
++.|++++| ++++..++..++++||+|+++.|+|..... .++..|+++..++. .|++++++.+.+ ++
T Consensus 93 ~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~----~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~-~~ 167 (385)
T PRK09276 93 ETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKI----GTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAK-KA 167 (385)
T ss_pred CCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHH----HHHHcCCEEEEEecCCCCCCcCCHHHHHHhccc-cc
Confidence 434555555 599999999999999999999999987543 33445777665542 267888888876 49
Q ss_pred EEEEEeCCCCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCCccc-----cccc----cCCcEEEECCccccccCCCc
Q 009604 288 SLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS----LGADLVLHSATKFIGGHNDV 355 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l~----~gaDivv~S~sK~lgg~g~v 355 (531)
++|++++|+||||.+++. ++|+++|+++|++||+|++|...... .... .+..+++.|+||.+|.+|.+
T Consensus 168 ~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlR 247 (385)
T PRK09276 168 KLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWR 247 (385)
T ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchh
Confidence 999999999999999984 78888899999999999998643211 1111 13458899999999877754
Q ss_pred eEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCC
Q 009604 356 LAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSH 431 (531)
Q Consensus 356 ~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~ 431 (531)
.|++++++++++.+...........+......+...+. .+....++..++++.+.+.|+++ ++. +..|.
T Consensus 248 -iG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~---- 320 (385)
T PRK09276 248 -IGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLE-VEPPK---- 320 (385)
T ss_pred -heeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCC----
Confidence 67888999999888776554443334333333333332 22333344456677788888765 331 21111
Q ss_pred chhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEE
Q 009604 432 PEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRF 510 (531)
Q Consensus 432 p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRl 510 (531)
.|.++++.++.. ....+|.+.| +..++.+..|..+. .-.+++|||
T Consensus 321 ------------~~~~~~v~~~~~-~~~~~l~~~ll~~~gi~v~~g~~f~---------------------~~~~~~~Ri 366 (385)
T PRK09276 321 ------------ATFYVWAPVPKG-YTSAEFATLLLDKAGVVVTPGNGFG---------------------EYGEGYFRI 366 (385)
T ss_pred ------------cceEEEEECCCC-CCHHHHHHHHHHhCCEEECCchhhC---------------------CCCCCeEEE
Confidence 234478888643 2344555554 33465555553321 012468999
Q ss_pred EecCCCHHHHHHHH
Q 009604 511 SFGVEDFEDLKADV 524 (531)
Q Consensus 511 SvGlE~~edli~dL 524 (531)
|++. +.+++.+.|
T Consensus 367 s~~~-~~~~l~~~l 379 (385)
T PRK09276 367 ALTV-PDERIEEAV 379 (385)
T ss_pred EeCC-CHHHHHHHH
Confidence 9996 344444433
No 106
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.88 E-value=5.7e-21 Score=198.57 Aligned_cols=260 Identities=17% Similarity=0.230 Sum_probs=180.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCcEE
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNVSL 289 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tkl 289 (531)
.+++++++++++++..++.+++++||+|+++.++|.... ..++..|+++..++. .|++++++++++ ++++
T Consensus 71 ~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ 145 (346)
T TIGR01141 71 PEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYE----ISAKIHGAEVVKVPLDEDGQLDLEDILVAIDD-KPKL 145 (346)
T ss_pred hHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEeccCCCCCCCHHHHHHhcCC-CCCE
Confidence 345666565668999999999999999999999986432 334556888877763 478999998876 4999
Q ss_pred EEEeCCCCCCCcccCHHHHHHHHHhc--CCEEEEeCCCCCCccc-cc---cc-cCCcEEEECCccccccCCCceEEEEEe
Q 009604 290 FFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-KA---LS-LGADLVLHSATKFIGGHNDVLAGSISG 362 (531)
Q Consensus 290 V~lesP~NPtG~v~dl~~I~~la~~~--gi~lIvD~a~a~~~~~-~~---l~-~gaDivv~S~sK~lgg~g~v~gG~iv~ 362 (531)
|++++|+||||.+.+++++.++++.+ |+++|+|++|...... .+ .. ...++++.|+||+++.+|. ..|++++
T Consensus 146 v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~-r~G~~~~ 224 (346)
T TIGR01141 146 VFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGL-RIGYAIA 224 (346)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhh-hceeeec
Confidence 99999999999999999999999877 9999999998632211 11 11 2345788999999976653 4788889
Q ss_pred ChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhh
Q 009604 363 SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQ 439 (531)
Q Consensus 363 ~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~ 439 (531)
++++++.++.....++ .++.....+...++ .+....++..++++.+.+.|++++++. + +|.
T Consensus 225 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~------------ 288 (346)
T TIGR01141 225 NAEIIDALNKVRAPFN--LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLE-V-YPS------------ 288 (346)
T ss_pred CHHHHHHHHhccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-CCC------------
Confidence 9998888876544333 23332222222222 234445566677888888998776653 2 222
Q ss_pred hcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009604 440 QMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 519 (531)
Q Consensus 440 ~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~ed 519 (531)
.|++++|++++ ..++|.+.|...++.+..|..+. +. ++.+|||++ +++
T Consensus 289 ----~g~~~~~~~~~---~~~~~~~~L~~~gI~v~~g~~f~---------------------~~-~~~iRls~~---~~~ 336 (346)
T TIGR01141 289 ----DANFVLIRFPR---DADALFEALLEKGIIVRDLNSYP---------------------GL-PNCLRITVG---TRE 336 (346)
T ss_pred ----cCCEEEEecCC---CHHHHHHHHHHCCeEEEeCCCcC---------------------CC-CCeEEEecC---CHH
Confidence 25688998864 34566676665676666653210 12 578999998 355
Q ss_pred HHHHHHHHH
Q 009604 520 LKADVLQAL 528 (531)
Q Consensus 520 li~dL~~AL 528 (531)
.++.+.++|
T Consensus 337 ~i~~~~~~l 345 (346)
T TIGR01141 337 ENDRFLAAL 345 (346)
T ss_pred HHHHHHHHh
Confidence 567776665
No 107
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.88 E-value=7.3e-21 Score=199.94 Aligned_cols=275 Identities=23% Similarity=0.269 Sum_probs=194.0
Q ss_pred CcEEEeCChHHHHHHHHHHh---ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCc
Q 009604 216 ESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNV 287 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al---l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~t 287 (531)
+++++++|++.++..++.++ +++||+|++....|++....+....++.|+++..++. .|+++++++|++ ++
T Consensus 62 ~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~-~~ 140 (371)
T PF00266_consen 62 EEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNP-DT 140 (371)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHT-TE
T ss_pred cccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhcc-cc
Confidence 45778888889999999998 7999999999999999887777777788999887753 378999999987 49
Q ss_pred EEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChHH
Q 009604 288 SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 366 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l 366 (531)
++|++.+..|.+|...|+++|.++||++|+++++|.+++.+. ..+..++|+|+++.|.+|++|++| .|+++.+++.
T Consensus 141 ~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~Kl~gp~G---~g~l~v~~~~ 217 (371)
T PF00266_consen 141 RLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHKLGGPPG---LGFLYVRPEA 217 (371)
T ss_dssp SEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTSTTSSST---EEEEEEEHHH
T ss_pred ceEEeecccccccEEeeeceehhhhhccCCceeEechhccccccccccccccceeeecccccCCCCc---hhhheehhhh
Confidence 999999999999999999999999999999999999987664 456667899999999999656655 6899999988
Q ss_pred HHHHHHHhh---------------------hcCCCchHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCCc
Q 009604 367 VTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 367 i~~l~~~~~---------------------~~G~~~s~~~a~l~l~~L~tl-----~~r~~~~~~na~~La~~L~~~p~v 420 (531)
+++++.... ..+++.+....+.+..+++.+ ....++..+.++++.+.|++.+.+
T Consensus 218 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~ 297 (371)
T PF00266_consen 218 IERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGI 297 (371)
T ss_dssp HHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred hhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCce
Confidence 887742111 112234333333333333333 222345556777888888888876
Q ss_pred eEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHh
Q 009604 421 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 500 (531)
Q Consensus 421 ~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~ 500 (531)
. +.-|. .. ...+++++|.+++. +...+...|+..++.++.|..+.. | ....
T Consensus 298 ~-~~~~~---~~---------~~~~~i~~~~~~~~--~~~~~~~~L~~~~I~~~~G~~~~~---~-----------~~~~ 348 (371)
T PF00266_consen 298 E-VLGPD---DE---------PRRPSIVSFNLPGS--DADDVVKYLEERGIAVSTGSACAG---P-----------SLDI 348 (371)
T ss_dssp E-ESSSS---CG---------GBGTTEEEEEETTS--SHHHHHHHHHHHTEEEEESTTTCH---H-----------HHHH
T ss_pred e-Eeeec---cc---------ccccceEEEeecCC--CHHHHHHHHhhcCEEEeccCcccH---H-----------HHHH
Confidence 4 22221 11 12578999999763 224444445444677777755431 1 0011
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHH
Q 009604 501 YGIMDNLVRFSFGVEDFEDLKADV 524 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE~~edli~dL 524 (531)
.+. ++.||+|++..++++.|+.|
T Consensus 349 ~~~-~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 349 LGM-GGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHT-TTEEEEE-GTTSSHHHHHHH
T ss_pred hCC-CCEEEEeccCCCCHHHHhhC
Confidence 122 28999999999999888875
No 108
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.88 E-value=8.7e-21 Score=199.29 Aligned_cols=279 Identities=16% Similarity=0.160 Sum_probs=183.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCC---------------EEEEcCCCccchHHHHHhhcccCCcEEEEeCC---CCH
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGG---------------HIVTTTDCYRKTRIFIETVLPKMGITATVIDP---ADM 275 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD---------------~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---~d~ 275 (531)
|.++++++++|++|+.+++.+++++|| +||++.+.|......+...+...|+++.+++. .|+
T Consensus 59 g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~ 138 (363)
T TIGR01437 59 GVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSA 138 (363)
T ss_pred CCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCH
Confidence 567899999999999999999999998 88888755532110112344556878777763 489
Q ss_pred HHHHHhccCCCcEEEE-EeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCCC
Q 009604 276 EGLEAALNNNNVSLFF-TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHND 354 (531)
Q Consensus 276 e~Le~al~~~~tklV~-lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g~ 354 (531)
++++++|+++ |++|+ +++|+||+|.+.|+++|.++||++|+++|+|++++..+ .....+|+|++++|+||+++|+.
T Consensus 139 ~~le~ai~~~-t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~~~~g~D~~~~S~~K~l~gp~- 215 (363)
T TIGR01437 139 EQLEAAITEK-TAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKYYRLGADLVIYSGAKAIEGPT- 215 (363)
T ss_pred HHHHHhcChh-ceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHHHHcCCCEEEEeCCcccCCCc-
Confidence 9999999985 88665 68899999999999999999999999999999997433 23345689999999999988763
Q ss_pred ceEEEEEeChHHHHHHHHHhhhcCCC--chHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCC
Q 009604 355 VLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 428 (531)
Q Consensus 355 v~gG~iv~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~L~tl----~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl 428 (531)
+|++++++++++.++......+.. ........+..+++.+ ..+.++..+++..+.+.|.+.|++.....+..
T Consensus 216 --~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~ 293 (363)
T TIGR01437 216 --SGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGVSASIVQDE 293 (363)
T ss_pred --eEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 789999888887765432211111 1111111111233322 23344555667788899998887754322211
Q ss_pred CCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009604 429 KSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 508 (531)
Q Consensus 429 ~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lI 508 (531)
... .+ ....++|...+......++.+.|+..++.+-.- + .....+.+
T Consensus 294 ~~~-~~---------~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r--------~---------------~~~~~~~~ 340 (363)
T TIGR01437 294 AGR-DI---------ARAEIRFDESELGMTAADVVQALRQGEPAIYTR--------G---------------YKANEGII 340 (363)
T ss_pred CCC-cC---------ceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEe--------e---------------eeecCCeE
Confidence 100 00 123466665321134567777775433222110 0 11246789
Q ss_pred EEEecCCCHHHHHHHHHHHHHhC
Q 009604 509 RFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 509 RlSvGlE~~edli~dL~~AL~~i 531 (531)
||++..-+ ++.++.|.++|.++
T Consensus 341 ~l~~~~~~-~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 341 EIDPRSVT-GGQLDIIVERIREI 362 (363)
T ss_pred EEEeecCC-HHHHHHHHHHHHHh
Confidence 99998755 77889999988753
No 109
>PLN02656 tyrosine transaminase
Probab=99.88 E-value=5.3e-20 Score=196.29 Aligned_cols=262 Identities=16% Similarity=0.180 Sum_probs=169.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
.+++++++++++|+.+++.+++++||+|++++|.|..... .....|+++..++. .|+++++++++++ +
T Consensus 96 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~-~ 170 (409)
T PLN02656 96 LDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYEL----CAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQN-T 170 (409)
T ss_pred cccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHH----HHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccC-c
Confidence 4567777777799999999999999999999999975432 23345777776653 3688999988774 8
Q ss_pred EEEEEeCCCCCCCccc---CHHHHHHHHHhcCCEEEEeCCCCCCccc----ccc----ccCCcEEEECCccccccCCCce
Q 009604 288 SLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL----SLGADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 288 klV~lesP~NPtG~v~---dl~~I~~la~~~gi~lIvD~a~a~~~~~----~~l----~~gaDivv~S~sK~lgg~g~v~ 356 (531)
++|++++|+||||.++ ++++|+++|+++|++||+|++|...... .++ ....-+++.|+||.|+.+|.+
T Consensus 171 ~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlR- 249 (409)
T PLN02656 171 VALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWR- 249 (409)
T ss_pred eEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCccee-
Confidence 9999999999999997 4778899999999999999998743211 111 112347899999998888755
Q ss_pred EEEEEeC--------hHHHHHHHHHhhhcCCCchHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHcCCCceEE
Q 009604 357 AGSISGS--------GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKILEAHPKVKRV 423 (531)
Q Consensus 357 gG~iv~~--------~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~-----tl~~r~~~~~~na~~La~~L~~~p~v~~V 423 (531)
.|+++++ +++++.+.......+ ..+....+.+...++ .+....++..+++..+.+.|++++.+..+
T Consensus 250 iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~ 328 (409)
T PLN02656 250 LGWFVTTDPSGSFRDPKIVERIKKYFDILG-GPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCP 328 (409)
T ss_pred EEEEEEeCcccccccHHHHHHHHHHHhhhc-CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCC
Confidence 6777762 467777776544332 233333333333332 23344445556677788888765432111
Q ss_pred eCCCCCCCchhhhhhhhcCCcccEEEEEEcCC----HHHHHHH-HHHcCCCCcccccCCcccccccCccccccCCCHHHH
Q 009604 424 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKF-IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 498 (531)
Q Consensus 424 ~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~----~~~~~~f-l~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~ 498 (531)
..|. .|..+++.++.. ......| ...++..++.+..|..+
T Consensus 329 ~~p~----------------gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f------------------- 373 (409)
T PLN02656 329 HKPE----------------GSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAV------------------- 373 (409)
T ss_pred cCCC----------------eEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhc-------------------
Confidence 1121 345678777521 0112233 34444456666655332
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHH
Q 009604 499 LKYGIMDNLVRFSFGVEDFEDLKAD 523 (531)
Q Consensus 499 ~~~gi~~~lIRlSvGlE~~edli~d 523 (531)
| .++++||+++. +.+++.+.
T Consensus 374 ---g-~~~~iRi~~~~-~~e~l~ea 393 (409)
T PLN02656 374 ---G-LKNWLRITFAA-DPSSLEEA 393 (409)
T ss_pred ---C-CCCeEEEEeCC-CHHHHHHH
Confidence 1 14789999997 44444333
No 110
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=7.6e-21 Score=198.83 Aligned_cols=259 Identities=15% Similarity=0.162 Sum_probs=171.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----CCHHHHHHhccCCCcEEE
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~d~e~Le~al~~~~tklV 290 (531)
.+++++++++++++..++.+++++||+|+++.|.|+.... .+...|+++..++. .|++++++++++ ++++|
T Consensus 81 ~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v 155 (359)
T PRK03158 81 EEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRH----NAIIEGAEVREVPLKDGGHDLEAMLKAIDE-QTKIV 155 (359)
T ss_pred HHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHH----HHHHcCCeEEEEecCCCCcCHHHHHHhcCC-CCCEE
Confidence 3455555555599999999999999999999999987443 33445777777653 378999988877 49999
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHh--cCCEEEEeCCCCCCccc----ccc----ccCCcEEEECCccccccCCCceEEEE
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----SLGADLVLHSATKFIGGHNDVLAGSI 360 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~--~gi~lIvD~a~a~~~~~----~~l----~~gaDivv~S~sK~lgg~g~v~gG~i 360 (531)
++++|+||||.+.+.++|.++++. +|+++|+||+|...... ..+ ..+..+++.|+||.++.+|. ..|++
T Consensus 156 ~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~~ 234 (359)
T PRK03158 156 WICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAAL-RVGYG 234 (359)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcch-hhehh
Confidence 999999999999999999998876 59999999998643221 111 12456889999999987664 46889
Q ss_pred EeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhh
Q 009604 361 SGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIA 437 (531)
Q Consensus 361 v~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~ 437 (531)
++++++++.+......++ .+......+...++ .+....+...++.+.+.+.|+++ ++. + +|.
T Consensus 235 v~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~-~~~---------- 299 (359)
T PRK03158 235 IASEELIEKLNIARPPFN--TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLF-Y-YPS---------- 299 (359)
T ss_pred cCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-e-CCC----------
Confidence 999999988877654333 34444333333332 22222333445566677777765 332 1 222
Q ss_pred hhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-C
Q 009604 438 TQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-D 516 (531)
Q Consensus 438 ~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE-~ 516 (531)
.|+++++.++. ....+.+.|...++.+..|..+ | .++.|||++|.. +
T Consensus 300 ------~g~~i~~~~~~---~~~~~~~~l~~~gv~v~~g~~f----------------------~-~~~~iRi~~~~~~~ 347 (359)
T PRK03158 300 ------QTNFIFVDTGR---DANELFEALLKKGYIVRSGAAL----------------------G-FPTGVRITIGLKEQ 347 (359)
T ss_pred ------cCcEEEEECCC---CHHHHHHHHHHCCeEEeeCCCC----------------------C-CCCeEEEecCCHHH
Confidence 25677887742 2345566665456666665332 1 146899999943 2
Q ss_pred HHHHHHHHHH
Q 009604 517 FEDLKADVLQ 526 (531)
Q Consensus 517 ~edli~dL~~ 526 (531)
.+.+++.|++
T Consensus 348 ~~~l~~al~~ 357 (359)
T PRK03158 348 NDKIIELLKE 357 (359)
T ss_pred HHHHHHHHHH
Confidence 3444444443
No 111
>PLN00175 aminotransferase family protein; Provisional
Probab=99.88 E-value=4.1e-20 Score=197.45 Aligned_cols=256 Identities=16% Similarity=0.161 Sum_probs=171.9
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHHHHhccCCCcEEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~~~~tklV 290 (531)
++++++++++|+.+++.++++|||+|+++.|.|..... .++..|+++..++. .|+++|+++++++ +|+|
T Consensus 117 ~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~-~k~i 191 (413)
T PLN00175 117 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSK-TRAI 191 (413)
T ss_pred CEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHH----HHHHcCCEEEEEECCcccCCCCHHHHHHhcCcC-ceEE
Confidence 34455555699999999999999999999999977543 34456777777653 3689999999874 9999
Q ss_pred EEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----cccc----cCCcEEEECCccccccCCCceEEE
Q 009604 291 FTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS----LGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 291 ~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~l~----~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
++++|+||||.+++ +++|+++|+++|++||+|++|...... .... .+..+++.|+||.++..|.+ .|+
T Consensus 192 ~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~R-iG~ 270 (413)
T PLN00175 192 LINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWK-IGW 270 (413)
T ss_pred EecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchh-eee
Confidence 99999999999986 667888999999999999998654221 1111 13458999999999866644 788
Q ss_pred EEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhh
Q 009604 360 ISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHH 435 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~ 435 (531)
+++++++++.+.........+.+....+.+...++ .+....++..++++.+.+.|+++ ++. +.-|.
T Consensus 271 ~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~-------- 340 (413)
T PLN00175 271 AIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFK-VYPSS-------- 340 (413)
T ss_pred eEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCC--------
Confidence 89999999888776654444445444444444443 23344455667778888888876 332 21121
Q ss_pred hhhhhcCCcccEEEEEEcC-CHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009604 436 IATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 513 (531)
Q Consensus 436 l~~~~~~g~g~ivsf~l~g-~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG 513 (531)
.|.++++.+.. +.....+|.+.| +..++.+..|..+..- .+..++.|||+++
T Consensus 341 --------g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~------------------~~~~~~~iRls~~ 394 (413)
T PLN00175 341 --------GTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLN------------------PEDGKNLVRFAFC 394 (413)
T ss_pred --------eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCC------------------CCCCCCEEEEEEc
Confidence 23457777632 211235666665 3446666555432100 0012578999999
Q ss_pred C
Q 009604 514 V 514 (531)
Q Consensus 514 l 514 (531)
.
T Consensus 395 ~ 395 (413)
T PLN00175 395 K 395 (413)
T ss_pred C
Confidence 6
No 112
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.88 E-value=2.4e-20 Score=198.78 Aligned_cols=269 Identities=20% Similarity=0.181 Sum_probs=183.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhcc---CCCcE
Q 009604 214 GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN---NNNVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~--pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~---~~~tk 288 (531)
|.+++++++||++|+..++..+.. +||.|+++...|...+. .++..|.++..++..|.+.+++.++ ..+++
T Consensus 105 g~~~~i~~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~----~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~ 180 (410)
T PRK13392 105 GKESALLFTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIE----GIRRSGAEKQVFRHNDLADLEEQLASVDPDRPK 180 (410)
T ss_pred CCCCEEEECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHH----HHHHcCCeEEEEeCCCHHHHHHHHHhccCCCCE
Confidence 778899999999999888887754 89999888777766543 3344577777776667776766653 22589
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc-c--------ccccCCcEEEECCccccccCCCceEEE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--------ALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~-~--------~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+|++++|+||+|.+.|+++|.++|+++|+++|+||+|+.+... . .+....|+++.|++|.+|.. ||+
T Consensus 181 ~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~----GG~ 256 (410)
T PRK13392 181 LIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL----GGY 256 (410)
T ss_pred EEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc----cch
Confidence 9999999999999999999999999999999999998744321 1 11124689999999999865 588
Q ss_pred EEeChHHHHHHHHHhhh--cCCCchHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 360 ISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~L~t---l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
+++++++++.++..... ++...++..++.+...|+. ...+.++..++++++.+.|++. ++. + +|.
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~------- 326 (410)
T PRK13392 257 IAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN-GIP-V-MPS------- 326 (410)
T ss_pred hhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC-C-CCC-------
Confidence 88898888887765542 3344455444444444443 3344455667788888888764 221 1 111
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 513 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~-~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG 513 (531)
.++++.+.++ ......++.+.|. ..++.++.+.. |.. + -....||||+.
T Consensus 327 ---------~~~~~~i~~~-~~~~~~~~~~~L~~~~GI~v~~~~~------p~~------~--------~~~~~lRis~~ 376 (410)
T PRK13392 327 ---------PSHIVPVMVG-DPTLCKAISDRLMSEHGIYIQPINY------PTV------P--------RGTERLRITPT 376 (410)
T ss_pred ---------CCCEEEEEeC-CHHHHHHHHHHHHHhCCEEEeeeCC------CCC------C--------CCCceEEEEEC
Confidence 2466666664 3334567777763 45665554311 110 0 12368999998
Q ss_pred CCCHHHHHHHHHHHHHh
Q 009604 514 VEDFEDLKADVLQALHA 530 (531)
Q Consensus 514 lE~~edli~dL~~AL~~ 530 (531)
..++++.++.+.++|++
T Consensus 377 ~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 377 PLHDDEDIDALVAALVA 393 (410)
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 87777777777777653
No 113
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.88 E-value=1.9e-20 Score=194.60 Aligned_cols=288 Identities=18% Similarity=0.176 Sum_probs=195.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC------CHHHHHHhccCCC
Q 009604 214 GAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA------DMEGLEAALNNNN 286 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~al-l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~------d~e~Le~al~~~~ 286 (531)
|.+++++++||++|+..++.++ +++||+|+++.++|.++...+ ...|+++.+++.+ |++++++++++ +
T Consensus 32 ~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~ 106 (352)
T cd00616 32 GVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAI----LLLGATPVFVDIDPDTYNIDPELIEAAITP-R 106 (352)
T ss_pred CCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHH----HHcCCeEEEEecCCCcCCcCHHHHHHhcCc-C
Confidence 4467999999999999999988 689999999999998876443 3458888777532 68999999977 4
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc--ccccCCcEEEECCc--cccccCCCceEEEEEe
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--ALSLGADLVLHSAT--KFIGGHNDVLAGSISG 362 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~--~l~~gaDivv~S~s--K~lgg~g~v~gG~iv~ 362 (531)
+++|+++ |++|.+.|+++|.++|+++|+++|+|++++.+.... ......|+.+.|++ |+++++. ||+++.
T Consensus 107 ~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~~~~~~---gg~~~~ 180 (352)
T cd00616 107 TKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPTKNLTTGE---GGAVVT 180 (352)
T ss_pred CeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCCCCCcccC---ceEEEE
Confidence 9999975 578999999999999999999999999987653322 22223688999976 9995432 677776
Q ss_pred C-hHHHHHHHHHhhh---------------cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 363 S-GKLVTQIRNLHHV---------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 363 ~-~~li~~l~~~~~~---------------~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
+ +++.++++..... ++..+++..+++.+..++.+....++..++++.+.+.|.+.++++.+ .+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~-~~ 259 (352)
T cd00616 181 NDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERYKELLADLPGIRLP-DV 259 (352)
T ss_pred CCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCC-CC
Confidence 5 5777766543321 12245567777777778888888888889999999999987776422 22
Q ss_pred CCCCCchhhhhhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCCcccccCCcccccccCcccc-----ccCCCHHHHHh
Q 009604 427 GLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS-----YWDLSQSERLK 500 (531)
Q Consensus 427 gl~s~p~~~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s-----~~~~~~~~~~~ 500 (531)
. ... .....++.|.+++. ......+.+.|+..++.++.... .....+.... ....+..
T Consensus 260 ~--~~~---------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a---- 323 (352)
T cd00616 260 P--PGV---------KHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYP-PLHHQPPYKKLLGYPPGDLPNA---- 323 (352)
T ss_pred C--CCC---------ceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecC-ccccCHhhhhccCCCcCCChHH----
Confidence 1 000 01346888888630 13445566666544543332111 0100000000 0001111
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 501 YGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
..+..+.|||+++...+++.++.|.++|+
T Consensus 324 ~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 324 EDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 11235789999999999999999999874
No 114
>PRK08912 hypothetical protein; Provisional
Probab=99.88 E-value=3.3e-20 Score=196.13 Aligned_cols=256 Identities=17% Similarity=0.194 Sum_probs=170.9
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHHHHhccCCCcEEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~~~~tklV 290 (531)
++++++++++++.+++.+++++||+|+++.|.|..... .++..|+++..++. .|+++|++.+++ ++++|
T Consensus 89 ~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v 163 (387)
T PRK08912 89 EVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP----LIRRAGGVPRLVRLEPPHWRLPRAALAAAFSP-RTKAV 163 (387)
T ss_pred cEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH----HHHHcCCEEEEEecCcccCcCCHHHHHHHhCc-cceEE
Confidence 56666666799999999999999999999999987543 34556777766643 268999999877 48999
Q ss_pred EEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----cc---c-c-cCCcEEEECCccccccCCCceEE
Q 009604 291 FTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA---L-S-LGADLVLHSATKFIGGHNDVLAG 358 (531)
Q Consensus 291 ~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~---l-~-~gaDivv~S~sK~lgg~g~v~gG 358 (531)
++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .+ . . .+.++++.|+||.++.+|. ..|
T Consensus 164 ~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG 242 (387)
T PRK08912 164 LLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW-KVG 242 (387)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc-eeE
Confidence 99999999999997 667888999999999999997532211 11 1 1 2356999999999986664 468
Q ss_pred EEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 359 SISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 359 ~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
++++++++++.+.......+...++.....+...+ +.+....++..++.+.+.+.|+++ ++. + ++.
T Consensus 243 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~------- 312 (387)
T PRK08912 243 FVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFP-V-LPS------- 312 (387)
T ss_pred EEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-c-cCC-------
Confidence 88899999888876654433333332222222222 223333445556777788888775 231 1 111
Q ss_pred hhhhhhcCCcccEEEEEEcC-C-HHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE
Q 009604 435 HIATQQMTGFGGVVSFEVDG-D-LTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS 511 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g-~-~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlS 511 (531)
..|.++++.++. + .....+|.+.| +..++.+..|..+... +-..+.+||+
T Consensus 313 --------~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~-------------------~~~~~~iRl~ 365 (387)
T PRK08912 313 --------QGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEE-------------------DPVTSVVRFC 365 (387)
T ss_pred --------CcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCC-------------------CCCCCEEEEE
Confidence 024467778753 1 12445666665 4556666665432110 0024799999
Q ss_pred ecCC
Q 009604 512 FGVE 515 (531)
Q Consensus 512 vGlE 515 (531)
++.+
T Consensus 366 ~~~~ 369 (387)
T PRK08912 366 FAKR 369 (387)
T ss_pred EeCC
Confidence 9974
No 115
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.87 E-value=5.3e-20 Score=193.37 Aligned_cols=269 Identities=19% Similarity=0.152 Sum_probs=189.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCC--CcEEEE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNN--NVSLFF 291 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~--~tklV~ 291 (531)
+.++.+++++|++++..++..++++||+|+++.+.|+.+... +...|.++..++..|++++++.+++. ++++|+
T Consensus 98 ~~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi 173 (385)
T PRK05958 98 GAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDG----ARLSRARVRRYPHNDVDALEALLAKWRAGRALIV 173 (385)
T ss_pred CCCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHH----HHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEE
Confidence 567889999999888888888899999999999999876543 33457788788878999999998652 367888
Q ss_pred EeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc-c--------ccc-cCCcEEEECCccccccCCCceEEEEE
Q 009604 292 TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--------ALS-LGADLVLHSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 292 lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~-~--------~l~-~gaDivv~S~sK~lgg~g~v~gG~iv 361 (531)
+++++|++|.+.++++|.++|+++|++||+|++|+.+... . .+. ...++++.|++|.+++. ||+++
T Consensus 174 ~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~----Gg~~~ 249 (385)
T PRK05958 174 TESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSS----GAAVL 249 (385)
T ss_pred EEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccC----CcEEE
Confidence 8899999999999999999999999999999998654221 0 111 22448899999999864 47888
Q ss_pred eChHHHHHHHHHhh--hcCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhh
Q 009604 362 GSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHI 436 (531)
Q Consensus 362 ~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~L~tl---~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l 436 (531)
+++++.+.+..... ..+...++..+..+...++.+ ....++..++.+.+.+.|++.. ++ + ++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~-~-~~---------- 316 (385)
T PRK05958 250 GSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG-FQ-L-MD---------- 316 (385)
T ss_pred cCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CC-c-CC----------
Confidence 88888777654322 222334444444444445433 3445566677778888887652 21 1 11
Q ss_pred hhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC
Q 009604 437 ATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED 516 (531)
Q Consensus 437 ~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~ 516 (531)
..|++++|.++. .....+|.+.|...++.+..++..+. ...++.||||++...
T Consensus 317 ------~~~~~~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~~--------------------~~~~~~lRis~~~~~ 369 (385)
T PRK05958 317 ------SQSAIQPLIVGD-NERALALAAALQEQGFWVGAIRPPTV--------------------PAGTSRLRITLTAAH 369 (385)
T ss_pred ------CCCCEEEEEeCC-HHHHHHHHHHHHHCCceEecccCCCC--------------------CCCCceEEEEecCCC
Confidence 146788998864 24566788887666666654321100 012468999999888
Q ss_pred HHHHHHHHHHHHHh
Q 009604 517 FEDLKADVLQALHA 530 (531)
Q Consensus 517 ~edli~dL~~AL~~ 530 (531)
+++.++.+.++|++
T Consensus 370 ~~~~i~~~l~~l~~ 383 (385)
T PRK05958 370 TEADIDRLLEALAE 383 (385)
T ss_pred CHHHHHHHHHHHHh
Confidence 88888888888865
No 116
>PRK07777 aminotransferase; Validated
Probab=99.87 E-value=3.4e-20 Score=196.02 Aligned_cols=265 Identities=16% Similarity=0.154 Sum_probs=172.0
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhccCCCcE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNNNNVS 288 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--------~d~e~Le~al~~~~tk 288 (531)
+++++++|++|+.+++.+++++||+|+++.+.|......+ ...|.++..++. .|+++|++++++ +++
T Consensus 87 ~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~ 161 (387)
T PRK07777 87 EVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVI----AMAGAHRVPVPLVPDGRGFALDLDALRAAVTP-RTR 161 (387)
T ss_pred cEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHCCCEEEEeecCCccCCCcCCHHHHHHhcCc-ccE
Confidence 5777777789999999999999999999999998754333 334555554432 478999999877 499
Q ss_pred EEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc----cccc-----ccCCcEEEECCccccccCCCce
Q 009604 289 LFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL-----SLGADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 289 lV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~----~~~l-----~~gaDivv~S~sK~lgg~g~v~ 356 (531)
+|++++|+||||.+++ +++|.++|+++|+++|+|++|..... ..++ ..+.++++.|+||.++.+|. .
T Consensus 162 ~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-R 240 (387)
T PRK07777 162 ALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGW-K 240 (387)
T ss_pred EEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCc-e
Confidence 9999999999999985 77889999999999999999864221 0011 12467999999999986664 4
Q ss_pred EEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCc
Q 009604 357 AGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHP 432 (531)
Q Consensus 357 gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p 432 (531)
.|++++++++++.+...........+......+...+ +.+....+...++++.+.+.|+++ ++. + +|.
T Consensus 241 iG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~----- 312 (387)
T PRK07777 241 IGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFE-V-HDS----- 312 (387)
T ss_pred eEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-CCC-c-cCC-----
Confidence 6888899988888876554322222221112212222 223333345556777788888764 221 1 111
Q ss_pred hhhhhhhhcCCcccEEEEEEcC-CHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEE
Q 009604 433 EHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRF 510 (531)
Q Consensus 433 ~~~l~~~~~~g~g~ivsf~l~g-~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRl 510 (531)
..+.++++.+++ +......|.+.| +..++.+..|..+... + .-.++.|||
T Consensus 313 ----------~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~--~----------------~~~~~~~Ri 364 (387)
T PRK07777 313 ----------AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDP--A----------------DAWNHLVRF 364 (387)
T ss_pred ----------CcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCC--C----------------cCCCCeEEE
Confidence 024466667642 112346677777 3567777777543210 0 012468999
Q ss_pred EecCCCHHHHHHHH
Q 009604 511 SFGVEDFEDLKADV 524 (531)
Q Consensus 511 SvGlE~~edli~dL 524 (531)
+++. ..+++.+.+
T Consensus 365 ~~~~-~~~~l~~~l 377 (387)
T PRK07777 365 AFCK-RDDTLDEAI 377 (387)
T ss_pred EecC-CHHHHHHHH
Confidence 9997 344443333
No 117
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.87 E-value=3.5e-20 Score=196.59 Aligned_cols=255 Identities=18% Similarity=0.177 Sum_probs=167.9
Q ss_pred EEEeCCh-HHHHHHHHHHhccC---CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCC
Q 009604 218 TVIMASG-MSASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNN 286 (531)
Q Consensus 218 ~i~~sSG-~~Ai~~al~all~p---GD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~ 286 (531)
.|++++| ++++.+++.+++++ ||.|+++.|.|..... .+...|+++..++. .|++++++.+.+ +
T Consensus 92 ~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~-~ 166 (396)
T PRK09147 92 QVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG----AALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA-R 166 (396)
T ss_pred eEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH----HHHhcCCEEEEeccCccccCccCHHHHHHHHhh-c
Confidence 4555555 59999999999999 9999999999976543 34456777777653 367889887766 4
Q ss_pred cEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcccc---c---c----ccC-----CcEEEECCccc
Q 009604 287 VSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A---L----SLG-----ADLVLHSATKF 348 (531)
Q Consensus 287 tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~---~---l----~~g-----aDivv~S~sK~ 348 (531)
+|+|++++|+||||.+++ +++|+++|++++++||+||+|....... + + ..+ ..+++.|+||.
T Consensus 167 ~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 246 (396)
T PRK09147 167 TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKR 246 (396)
T ss_pred cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccc
Confidence 999999999999999996 6677888899999999999987542111 0 1 112 23899999999
Q ss_pred cccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 349 IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 349 lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
++.+|. ..|++++++++++.+.......+...+......+...+ +.+....+...++.+.+.+.|.++ + .+..
T Consensus 247 ~~~~Gl-RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~-~~~~ 322 (396)
T PRK09147 247 SNVPGL-RSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--L-DVQL 322 (396)
T ss_pred cCCccc-eeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--c-CCCC
Confidence 887774 47889999999988876655444444444333322232 223333444556666677777653 1 1112
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCC
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM 504 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~ 504 (531)
|. .|..++++++.+ ...|.+.| +..++.+..|..+..- . .. ..-.
T Consensus 323 p~----------------~g~f~~~~~~~~---~~~~~~~ll~~~gv~v~pg~~f~~~--~-----~~--------~~~~ 368 (396)
T PRK09147 323 PD----------------AGFYLWAKVPGD---DTEFARRLYADYNVTVLPGSYLARE--A-----HG--------VNPG 368 (396)
T ss_pred CC----------------eeEEEEEECCCC---HHHHHHHHHHhCCEEEeCCcccccc--c-----cC--------CCCC
Confidence 21 467888988622 24555554 3456666666543210 0 00 0012
Q ss_pred CCeEEEEecCC
Q 009604 505 DNLVRFSFGVE 515 (531)
Q Consensus 505 ~~lIRlSvGlE 515 (531)
.+++||+++..
T Consensus 369 ~~~iRi~~~~~ 379 (396)
T PRK09147 369 AGRVRIALVAP 379 (396)
T ss_pred CCeEEEEecCC
Confidence 47899999974
No 118
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.87 E-value=7.5e-20 Score=194.42 Aligned_cols=268 Identities=15% Similarity=0.134 Sum_probs=172.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
.+++++++++++++.+++.+++++||+|+++.|+|.... ..++..|+++..++. .|+++|+++++++ +
T Consensus 95 ~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~----~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~-~ 169 (401)
T TIGR01264 95 ADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE----TLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEK-T 169 (401)
T ss_pred HHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH----HHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccC-c
Confidence 456667666779999999999999999999999997644 344566787766542 3689999988774 8
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----cc-ccc---CCcEEEECCccccccCCCce
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-LSL---GADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~-l~~---gaDivv~S~sK~lgg~g~v~ 356 (531)
++|++++|+||||.+++ +++|+++|+++|++||+|++|...... .+ ..+ ..-+++.|+||.++..|.+
T Consensus 170 ~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlR- 248 (401)
T TIGR01264 170 AALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWR- 248 (401)
T ss_pred eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccce-
Confidence 99999999999999986 778888899999999999998653211 11 111 1237899999998887755
Q ss_pred EEEEEeCh------HHHHHHHHHhhhcCCCchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 357 AGSISGSG------KLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 357 gG~iv~~~------~li~~l~~~~~~~G~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
.|++++++ ++++.++..... ....+......+...+ +.+....++..++.+.+.+.|++++++. +..
T Consensus 249 iG~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~-~~~ 326 (401)
T TIGR01264 249 LGWIIIHDRRGILRDIRDGLVKLSQR-ILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLR-PVM 326 (401)
T ss_pred EEEEEecCcchhHHHHHHHHHHHhhc-cCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccC
Confidence 67777653 334444433321 1112222222222222 2334444555667778888888765432 222
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCC----HHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHh
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 500 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~----~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~ 500 (531)
|. .|..+++.++.. ......|.+.+ +..++.+..|+.+.
T Consensus 327 p~----------------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~-------------------- 370 (401)
T TIGR01264 327 PS----------------GAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFE-------------------- 370 (401)
T ss_pred CC----------------eeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcC--------------------
Confidence 32 467888887521 11234566654 34566666553321
Q ss_pred cCCCCCeEEEEecCC--CHHHHHHHHHHHHH
Q 009604 501 YGIMDNLVRFSFGVE--DFEDLKADVLQALH 529 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE--~~edli~dL~~AL~ 529 (531)
.++.+||++|.. +.++-++.|.+.++
T Consensus 371 ---~~~~iRis~~~~~~~l~~~l~rl~~~~~ 398 (401)
T TIGR01264 371 ---YPGFFRVVLTVPVVMMEEACSRIQEFCE 398 (401)
T ss_pred ---CCCeEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 147899999964 23344555555554
No 119
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.87 E-value=1.2e-19 Score=193.59 Aligned_cols=268 Identities=14% Similarity=0.116 Sum_probs=167.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
.+++++++++++++.+++.+++++||+|+++.|+|...... +...|+++..++. .|+++|+++++++ +
T Consensus 97 ~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~ 171 (409)
T PLN00143 97 PDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETY----AIFHHLEIRHFDLLPEKGWEVDLDAVEAIADEN-T 171 (409)
T ss_pred HhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHH----HHHcCCEEEEEeccCCCCCcCCHHHHHHhcccC-C
Confidence 45566665556999999999999999999999999875433 3445777766642 2789999988764 8
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----cccc-c---CCcEEEECCccccccCCCce
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS-L---GADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~l~-~---gaDivv~S~sK~lgg~g~v~ 356 (531)
+++++++|+||||.+++ +++|+++|+++|++||+||+|...... .++. . ..-+++.|+||.|+.+|.+
T Consensus 172 ~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlR- 250 (409)
T PLN00143 172 IAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWG- 250 (409)
T ss_pred EEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccc-
Confidence 99999999999999998 667888899999999999998753221 1111 1 1238899999999888765
Q ss_pred EEEEEe-Ch-HHH------HHHHHHhhhcCCCchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcCCCceEE
Q 009604 357 AGSISG-SG-KLV------TQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAHPKVKRV 423 (531)
Q Consensus 357 gG~iv~-~~-~li------~~l~~~~~~~G~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~~p~v~~V 423 (531)
.|++++ ++ .++ +.+...... ....+......+...+ ..+....++..++.+.+.+.|.+++..
T Consensus 251 vG~~v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~--- 326 (409)
T PLN00143 251 LGWLVTCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCI--- 326 (409)
T ss_pred eEEEEeeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCC---
Confidence 677776 33 333 223322221 1111222222222233 244555566667777777888765432
Q ss_pred eCCCCCCCchhhhhhhhcCCcccEEEEEEcC----CHHHHHHHHH-HcCCCCcccccCCcccccccCccccccCCCHHHH
Q 009604 424 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DLTATIKFID-ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 498 (531)
Q Consensus 424 ~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g----~~~~~~~fl~-~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~ 498 (531)
.++. .| ..|..+++.++. +......|+. .++..++.+..|..+
T Consensus 327 ~~~~---~p----------~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f------------------- 374 (409)
T PLN00143 327 MCPQ---KA----------EGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTV------------------- 374 (409)
T ss_pred CCCC---CC----------CeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCcccc-------------------
Confidence 1111 11 146688888852 1112334443 335556666666332
Q ss_pred HhcCCCCCeEEEEecCC--CHHHHHHHHHHHH
Q 009604 499 LKYGIMDNLVRFSFGVE--DFEDLKADVLQAL 528 (531)
Q Consensus 499 ~~~gi~~~lIRlSvGlE--~~edli~dL~~AL 528 (531)
| .++++||++|.. +.++-++.|.++|
T Consensus 375 ---~-~~~~iRi~~~~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 375 ---G-LKNWLRITFAVEQSSLEDGLGRLKSFC 402 (409)
T ss_pred ---C-CCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 1 147899999964 1233344444444
No 120
>PLN02483 serine palmitoyltransferase
Probab=99.87 E-value=1.1e-19 Score=197.73 Aligned_cols=269 Identities=16% Similarity=0.184 Sum_probs=186.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC------CCc
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN------NNV 287 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~------~~t 287 (531)
|.++++++++|+.++..++.+++++||+|+++.+.|.+... .++..|+++..++.+|++++++.+++ .+|
T Consensus 160 g~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~----~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t 235 (489)
T PLN02483 160 GKPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRT 235 (489)
T ss_pred CCCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHH----HHHHcCCeEEEEeCCCHHHHHHHHHhhhhcccccc
Confidence 88899999999999888899999999999999999988654 34556899988888888888776541 012
Q ss_pred -----E-EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc----------cccccCCcEEEECCcccccc
Q 009604 288 -----S-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----------KALSLGADLVLHSATKFIGG 351 (531)
Q Consensus 288 -----k-lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~----------~~l~~gaDivv~S~sK~lgg 351 (531)
+ +|+++...|++|.+.++++|.++|+++|++||+||++..+... .....+.|+++.|+||.+++
T Consensus 236 ~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~ 315 (489)
T PLN02483 236 HRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGS 315 (489)
T ss_pred ccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhccc
Confidence 4 6777788899999999999999999999999999998643211 11113578999999999987
Q ss_pred CCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHcCCCc
Q 009604 352 HNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---------HLRVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 352 ~g~v~gG~iv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~L~tl---------~~r~~~~~~na~~La~~L~~~p~v 420 (531)
. ||++++++++++.++.... .++..+++..+..+..+++.+ ..+.++..++++.+.+.|+++ ++
T Consensus 316 ~----GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~ 390 (489)
T PLN02483 316 C----GGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GF 390 (489)
T ss_pred C----ceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 5 5999999999998876532 234444444443344445422 245667778888889999876 32
Q ss_pred eEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHh
Q 009604 421 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 500 (531)
Q Consensus 421 ~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~ 500 (531)
.+..+. .+.++.+.+.. ......|.+.|...++.+...+. |+..
T Consensus 391 -~v~~~~----------------~sp~~~l~l~~-~~~~~~~~~~Ll~~GI~v~~~~f------p~~p------------ 434 (489)
T PLN02483 391 -EVLGDN----------------DSPVMPIMLYN-PAKIPAFSRECLKQNVAVVVVGF------PATP------------ 434 (489)
T ss_pred -cccCCC----------------CCCEEEEEECC-HHHHHHHHHHHHHCCcEEeeeCC------CCCC------------
Confidence 111110 13466666642 24455677776555655542111 1110
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 501 YGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
...+.+||+++..++++.++.+.++|+
T Consensus 435 --~~~~~vRi~isa~~t~edId~~l~~L~ 461 (489)
T PLN02483 435 --LLLARARICISASHSREDLIKALEVIS 461 (489)
T ss_pred --CCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 123679999998776666666666654
No 121
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.87 E-value=4.9e-20 Score=196.65 Aligned_cols=254 Identities=13% Similarity=0.163 Sum_probs=167.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
.+++++++++++++.+++.+++++||+|+++.|+|..... .++..|+++..++. .|+++|++++++ ++
T Consensus 104 ~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-~~ 178 (412)
T PTZ00433 104 KDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET----VCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD-RT 178 (412)
T ss_pred hhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH----HHHHcCCEEEEEecCccccCcCCHHHHHHHhcc-Cc
Confidence 4566666666799999999999999999999999987543 34556777776643 368999998877 49
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----cc-ccc---CCcEEEECCccccccCCCce
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-LSL---GADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~-l~~---gaDivv~S~sK~lgg~g~v~ 356 (531)
++|++++|+||||.+++ +++|.++|+++|++||+|++|...... .. ..+ ..-+++.|+||.++.+|.+
T Consensus 179 ~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlR- 257 (412)
T PTZ00433 179 KALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWR- 257 (412)
T ss_pred eEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCee-
Confidence 99999999999999886 667788899999999999998754321 11 111 1247889999999877755
Q ss_pred EEEEEe-C-----hHHHHHHHHHhhhcCCCchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 357 AGSISG-S-----GKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 357 gG~iv~-~-----~~li~~l~~~~~~~G~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
.|+++. + +++++.++...... ...+......+...+ +.+....++..++.+.+.+.|+++.++. +..
T Consensus 258 lG~~i~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~ 335 (412)
T PTZ00433 258 LGWLLLVDPHGNGGDFLDGMKRLGMLV-CGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLS-PTM 335 (412)
T ss_pred EEEEEEeCCcccHHHHHHHHHHHhhcc-CCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccC
Confidence 567664 2 35666665543321 223333333322223 2233334455567777888887654331 222
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCC----HHHHHHHHHHcC-CCCcccccCCcccccccCccccccCCCHHHHHh
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 500 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~----~~~~~~fl~~L~-~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~ 500 (531)
|. .|..+++.++.. .....+|.+.|. ..++.+..|..+.
T Consensus 336 p~----------------gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-------------------- 379 (412)
T PTZ00433 336 PR----------------GSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFH-------------------- 379 (412)
T ss_pred CC----------------eeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccC--------------------
Confidence 21 356788888631 112456676663 4566666654321
Q ss_pred cCCCCCeEEEEecCC
Q 009604 501 YGIMDNLVRFSFGVE 515 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE 515 (531)
. ++++||++|..
T Consensus 380 --~-~~~iRis~~~~ 391 (412)
T PTZ00433 380 --M-PGFTRLTISRP 391 (412)
T ss_pred --C-CCeEEEEecCC
Confidence 1 46899999974
No 122
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=4.6e-20 Score=193.80 Aligned_cols=263 Identities=19% Similarity=0.217 Sum_probs=174.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhccCC
Q 009604 215 AESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNNN 285 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--------~d~e~Le~al~~~ 285 (531)
++++++++++++++.+++.+++.+| |+|+++.|.|.... ..++..|+++..++. .|++++++.+...
T Consensus 76 ~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~ 151 (364)
T PRK04781 76 PEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA----VCARLQNAPLVEVPLVDGADGFHADVPAIVAAALAS 151 (364)
T ss_pred hHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhcc
Confidence 3445544544699999999999999 79999999876432 233455777777653 1567776554333
Q ss_pred CcEEEEEeCCCCCCCcccCHHHHHHHHHh--cCCEEEEeCCCCCCccc-cc---cc-cCCcEEEECCccccccCCCceEE
Q 009604 286 NVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ-KA---LS-LGADLVLHSATKFIGGHNDVLAG 358 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~dl~~I~~la~~--~gi~lIvD~a~a~~~~~-~~---l~-~gaDivv~S~sK~lgg~g~v~gG 358 (531)
++++|++++|+||||.+++.+++.++++. ++++||+||+|...... .. .. ...-+++.|+||.++-+|. ..|
T Consensus 152 ~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~Gl-RvG 230 (364)
T PRK04781 152 NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAA-RIG 230 (364)
T ss_pred CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccc-eee
Confidence 59999999999999999999888888764 47899999998754321 11 11 1234889999999986664 478
Q ss_pred EEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCch
Q 009604 359 SISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 433 (531)
Q Consensus 359 ~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~ 433 (531)
++++++++++.+......++. +.....++...+ ..+..++++..++++.+.+.|++++++..+ +|.
T Consensus 231 y~v~~~~l~~~l~~~~~~~~~--~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~------ 301 (364)
T PRK04781 231 SLIANAELIAVLRRCQAPYPV--PTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRV-YPS------ 301 (364)
T ss_pred eeeCCHHHHHHHHhccCCCCC--CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-CCC------
Confidence 889999999988876654443 222222222233 334445566667788888999877654333 332
Q ss_pred hhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009604 434 HHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 513 (531)
Q Consensus 434 ~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG 513 (531)
.|++++++++. ...+.+.|...++.+..|..+ .+. ++++||++|
T Consensus 302 ----------~g~f~~~~~~~----~~~~~~~l~~~gI~v~~~~~~---------------------~~~-~~~~Ris~~ 345 (364)
T PRK04781 302 ----------QGNFLLVRFDD----AEAAFQALLAAGVVVRDQRAA---------------------PRL-SDALRITLG 345 (364)
T ss_pred ----------CCcEEEEEcCC----HHHHHHHHHHCCeEEeeCCCC---------------------CCC-CCeEEEeCC
Confidence 46788998862 245566666566666555321 011 468999999
Q ss_pred CCC-HHHHHHHHHHH
Q 009604 514 VED-FEDLKADVLQA 527 (531)
Q Consensus 514 lE~-~edli~dL~~A 527 (531)
..+ .+.+++.|++.
T Consensus 346 ~~~~~~~l~~al~~~ 360 (364)
T PRK04781 346 TPEQNDRVLAALQRT 360 (364)
T ss_pred CHHHHHHHHHHHHHH
Confidence 754 35566655543
No 123
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.87 E-value=4.5e-20 Score=195.49 Aligned_cols=272 Identities=14% Similarity=0.143 Sum_probs=173.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhccCC
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNNN 285 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--------~d~e~Le~al~~~ 285 (531)
..++++++++|++|+.+++..++++||+|+++.|.|..... .++..|+++..++. .++++|++++++
T Consensus 87 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~- 161 (397)
T PRK07568 87 EPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNG----FATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP- 161 (397)
T ss_pred CcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHH----HHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc-
Confidence 34667777777899999999999999999999999976443 33456777766653 146889999877
Q ss_pred CcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc-----cccccc----CCcEEEECCccccccCC
Q 009604 286 NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL----GADLVLHSATKFIGGHN 353 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~-----~~~l~~----gaDivv~S~sK~lgg~g 353 (531)
++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... .....+ ...+++.|+||.++.+|
T Consensus 162 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G 241 (397)
T PRK07568 162 KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACG 241 (397)
T ss_pred cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCC
Confidence 4999999999999999985 78899999999999999999864321 111111 23388999999998777
Q ss_pred CceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCC
Q 009604 354 DVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 428 (531)
Q Consensus 354 ~v~gG~iv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl 428 (531)
.+ .|++++ ++++++.+...... ....+......+...++ .+....+...+++..+.+.|++++++ .+..|.
T Consensus 242 ~R-~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~p~- 317 (397)
T PRK07568 242 AR-IGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGV-VCEKPK- 317 (397)
T ss_pred cc-eEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc-eecCCC-
Confidence 55 667766 56777766544322 12223333222222332 23333444556777788888876544 222221
Q ss_pred CCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcC------CCCcccccCCcccccccCccccccCCCHHHHHhcC
Q 009604 429 KSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK------IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 502 (531)
Q Consensus 429 ~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~------~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~g 502 (531)
.|.+++++++.. ....|.+.|. ..++.+..|..+.. . .+
T Consensus 318 ---------------g~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~--~----------------~~ 362 (397)
T PRK07568 318 ---------------GAFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVMVAPASGFYA--T----------------PG 362 (397)
T ss_pred ---------------cceEEEEecCCC--CHHHHHHHHHhhcccccceEEEeCchHhcC--C----------------CC
Confidence 234578888642 2334544442 13455555533210 0 01
Q ss_pred CCCCeEEEEecCC--CHHHHHHHHHHHHH
Q 009604 503 IMDNLVRFSFGVE--DFEDLKADVLQALH 529 (531)
Q Consensus 503 i~~~lIRlSvGlE--~~edli~dL~~AL~ 529 (531)
..++.||||++.+ +.++.++.|.++|+
T Consensus 363 ~~~~~iRls~~~~~~~~~~~~~~l~~~l~ 391 (397)
T PRK07568 363 LGKNEIRIAYVLNEEDLKRAMEILKEALE 391 (397)
T ss_pred CCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 2347899999864 23445555555554
No 124
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.2e-20 Score=197.33 Aligned_cols=259 Identities=15% Similarity=0.178 Sum_probs=172.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCcE
Q 009604 215 AESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNVS 288 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tk 288 (531)
.+++++++++++++.+++.+++++| |+|+++.|+|.... ..++..|+++..++. .|++++++++ + +++
T Consensus 74 ~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~----~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~-~-~~~ 147 (351)
T PRK01688 74 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS----VSAETIGVEIRTVPTLDNWQLDLPAIADNL-D-GVK 147 (351)
T ss_pred HHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH----HHHHHcCCEEEEeecCCCCCCCHHHHHHhc-c-CCc
Confidence 3445544444599999999999997 99999999997533 345566888777653 3688999888 4 489
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHh--cCCEEEEeCCCCCCccc-c---cc-ccCCcEEEECCccccccCCCceEEEEE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ-K---AL-SLGADLVLHSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~--~gi~lIvD~a~a~~~~~-~---~l-~~gaDivv~S~sK~lgg~g~v~gG~iv 361 (531)
+|++++|+||||.+.+.++|.++++. .+++||+||+|...... . .. ....-+++.|+||.+|..|. ..|+++
T Consensus 148 lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGl-RiGy~i 226 (351)
T PRK01688 148 VVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGL-RCGFTL 226 (351)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHH-HHhHHh
Confidence 99999999999999988877777653 26889999998654321 1 11 12334899999999986653 368888
Q ss_pred eChHHHHHHHHHhhhcCCCchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhh
Q 009604 362 GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHI 436 (531)
Q Consensus 362 ~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l 436 (531)
+++++++.++.....++. +......+...| +.+..+++...++++++.+.|++++.+.. .+|.
T Consensus 227 ~~~~~i~~l~~~~~~~~v--~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~ps--------- 294 (351)
T PRK01688 227 ANEEVINLLLKVIAPYPL--STPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQ-VFDS--------- 294 (351)
T ss_pred CCHHHHHHHHhccCCCCC--CHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCe-ECCC---------
Confidence 999999888766544332 222222222222 34555566666778889999987765432 2332
Q ss_pred hhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC
Q 009604 437 ATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED 516 (531)
Q Consensus 437 ~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~ 516 (531)
.++++.+.++. ...+.+.|...++.+..++.. .|. ++++|||+|.
T Consensus 295 -------~~nfi~~~~~~----~~~l~~~L~~~gi~vr~~~~~---------------------~~~-~~~iRis~~~-- 339 (351)
T PRK01688 295 -------ETNYILARFTA----SSAVFKSLWDQGIILRDQNKQ---------------------PGL-SNCLRITIGT-- 339 (351)
T ss_pred -------CCcEEEEEcCC----HHHHHHHHHHCCeEEEECCCc---------------------CCC-CCeEEEeCCC--
Confidence 36678888752 345666665556555533211 122 4789999995
Q ss_pred HHHHHHHHHHHH
Q 009604 517 FEDLKADVLQAL 528 (531)
Q Consensus 517 ~edli~dL~~AL 528 (531)
.+..+.|.++|
T Consensus 340 -~~e~~~l~~al 350 (351)
T PRK01688 340 -REECQRVIDAL 350 (351)
T ss_pred -HHHHHHHHHhh
Confidence 35555666655
No 125
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.87 E-value=1.6e-20 Score=196.25 Aligned_cols=262 Identities=14% Similarity=0.181 Sum_probs=168.8
Q ss_pred CCcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-----CCCHHHHHHhccCCCcE
Q 009604 215 AESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-----PADMEGLEAALNNNNVS 288 (531)
Q Consensus 215 ~e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-----~~d~e~Le~al~~~~tk 288 (531)
.++.+++++|+ +++..++..++++||+|+++.|.|.... ..++..|+++..++ ..|++++++++++ +++
T Consensus 86 ~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 160 (361)
T PRK00950 86 VENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYE----ISAKAHGAKPVYAKREEDFSLDVDSVLNAITE-KTK 160 (361)
T ss_pred HHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeecCCCCCcCHHHHHHHhcc-CCC
Confidence 34566658887 7888888888999999999999886533 33455688877775 2368899998876 489
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc--ccc--ccCCcEEEECCccccccCCCceEEEEEeCh
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KAL--SLGADLVLHSATKFIGGHNDVLAGSISGSG 364 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~--~~l--~~gaDivv~S~sK~lgg~g~v~gG~iv~~~ 364 (531)
+|++++|+||||.+.+.++|.++|+++|+++|+|++|...... ..+ .....+++.|+||.+|.+|. ..|++++++
T Consensus 161 ~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~~~~~~ 239 (361)
T PRK00950 161 VIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGL-RIGYGFVPE 239 (361)
T ss_pred EEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchh-hcchhcCCH
Confidence 9999999999999999999999999999999999998643311 111 11234788999999986664 468888999
Q ss_pred HHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCc
Q 009604 365 KLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGF 444 (531)
Q Consensus 365 ~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~ 444 (531)
++++.++.....++ .+......+...++.. ..++++.+..+...+.|.+.-.+ .+ +|. .
T Consensus 240 ~~~~~~~~~~~~~~--~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~r~~l~~~l~~-~~-~~~----------------~ 298 (361)
T PRK00950 240 WLIDYYMRAKTPFS--LTRLSQAAAIAALSDK-EYIEKSIEHGIKSREYLYNELPF-KV-YPS----------------E 298 (361)
T ss_pred HHHHHHHHhcCCCC--CCHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHhhcCe-eE-CCC----------------c
Confidence 88888876554433 3344444333344321 11222222222333333221111 11 221 3
Q ss_pred ccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009604 445 GGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 524 (531)
Q Consensus 445 g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL 524 (531)
++++++.+++ .....|.+.|...++.+..|..+ + +..++.||||++.+ +.++.+
T Consensus 299 ~~~i~~~~~~--~~~~~~~~~l~~~gv~v~~~~~f-----~----------------~~~~~~lRis~~~~---~~~~~l 352 (361)
T PRK00950 299 ANFVLVDVTP--MTAKEFCEELLKRGVIVRDCTSF-----R----------------GLGDYYIRVSIGTF---EENERF 352 (361)
T ss_pred ceEEEEECCC--CCHHHHHHHHHHCCEEEeeCCcc-----C----------------CCCCCeEEEECCCH---HHHHHH
Confidence 5678888843 23456666665556665554221 0 11357899999942 234444
Q ss_pred HHHHH
Q 009604 525 LQALH 529 (531)
Q Consensus 525 ~~AL~ 529 (531)
.++|+
T Consensus 353 ~~~L~ 357 (361)
T PRK00950 353 LEILK 357 (361)
T ss_pred HHHHH
Confidence 44444
No 126
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.87 E-value=7.9e-20 Score=194.48 Aligned_cols=254 Identities=16% Similarity=0.145 Sum_probs=169.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
.++++++++|++|+.+++.+++++||+|+++.++|.... ..+...|+++..++. .|+++++++++++ +
T Consensus 96 ~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~ 170 (403)
T TIGR01265 96 ADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYD----TRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEK-T 170 (403)
T ss_pred HHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcC-c
Confidence 356777777789999999999999999999999997643 334556777776642 3689999988774 8
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----ccccc---CCcEEEECCccccccCCCce
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSL---GADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l~~---gaDivv~S~sK~lgg~g~v~ 356 (531)
++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... ....+ .--+++.|+||.++.+|.+
T Consensus 171 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR- 249 (403)
T TIGR01265 171 VAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWR- 249 (403)
T ss_pred cEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcce-
Confidence 99999999999999987 788999999999999999998754321 11111 1237889999998888755
Q ss_pred EEEEEeC-h-H-----HHHHHHHHhhhcCCCchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcCCCceEEe
Q 009604 357 AGSISGS-G-K-----LVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAHPKVKRVH 424 (531)
Q Consensus 357 gG~iv~~-~-~-----li~~l~~~~~~~G~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~~p~v~~V~ 424 (531)
.|++++. + + +++.+...... ....+......+...+ ..+....++..+++..+.+.|++++++. +.
T Consensus 250 iG~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~ 327 (403)
T TIGR01265 250 LGWIIIHDPHGIFRDTVLQGLKNLLQR-ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLV-CP 327 (403)
T ss_pred EEEEEEeCchhhhHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ec
Confidence 5666652 2 2 33334333221 1122333333332333 2344445566677888888998776552 22
Q ss_pred CCCCCCCchhhhhhhhcCCcccEEEEEEcCC----HHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHH
Q 009604 425 YPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 499 (531)
Q Consensus 425 ~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~----~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~ 499 (531)
.|. .|..++++++.. ......|.+.| +..++.+..|..+.
T Consensus 328 ~p~----------------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~------------------- 372 (403)
T TIGR01265 328 KPE----------------GAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFG------------------- 372 (403)
T ss_pred CCC----------------ceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccC-------------------
Confidence 232 467888888632 01244565653 45566666664321
Q ss_pred hcCCCCCeEEEEecCC
Q 009604 500 KYGIMDNLVRFSFGVE 515 (531)
Q Consensus 500 ~~gi~~~lIRlSvGlE 515 (531)
.++.|||+++.+
T Consensus 373 ----~~~~iRis~~~~ 384 (403)
T TIGR01265 373 ----LPNWVRITITVP 384 (403)
T ss_pred ----CCCeEEEEecCC
Confidence 147899999974
No 127
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.87 E-value=1.4e-20 Score=197.21 Aligned_cols=261 Identities=14% Similarity=0.200 Sum_probs=173.2
Q ss_pred cEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----CCHHHHHHhccCCCcEEEE
Q 009604 217 STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~d~e~Le~al~~~~tklV~ 291 (531)
+.|++++|+ +++.+++.+++++||+|+++.+.|.... ......|+++..++. .|++++++++++ ++++|+
T Consensus 85 ~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~ 159 (367)
T PRK02731 85 ERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYP----IAAQAVGAKPVEVPAKDYGHDLDAMLAAVTP-RTRLVF 159 (367)
T ss_pred HHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHH----HHHHHcCCeEEEecccCCCCCHHHHHHHhCC-CCcEEE
Confidence 345566665 8888888899999999999999986533 223456888877754 378999999986 499999
Q ss_pred EeCCCCCCCcccCHHHHHHHHHhc--CCEEEEeCCCCCCccc-------ccccc-CCcEEEECCccccccCCCceEEEEE
Q 009604 292 TESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-------KALSL-GADLVLHSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 292 lesP~NPtG~v~dl~~I~~la~~~--gi~lIvD~a~a~~~~~-------~~l~~-gaDivv~S~sK~lgg~g~v~gG~iv 361 (531)
+++|+||||.+++.++|.++++.+ |+++|+|++|...... ...+. ...+++.|++|.++.+|. ..|+++
T Consensus 160 l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-RiG~l~ 238 (367)
T PRK02731 160 IANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGL-RVGYGI 238 (367)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCccc-ceeeee
Confidence 999999999999999999998874 8999999997643221 11111 234788999999976653 478999
Q ss_pred eChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhh
Q 009604 362 GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIAT 438 (531)
Q Consensus 362 ~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~ 438 (531)
+++++++.+......++ .+....+.+...++ .+....+...++...+.+.|+++ ++. + +|.
T Consensus 239 ~~~~~~~~l~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~----------- 302 (367)
T PRK02731 239 APPEIIDALNRVRQPFN--VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLE-Y-IPS----------- 302 (367)
T ss_pred CCHHHHHHHHHccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCC-----------
Confidence 99998888876554333 23333343333333 22233333445566677777765 331 1 121
Q ss_pred hhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-CH
Q 009604 439 QQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-DF 517 (531)
Q Consensus 439 ~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE-~~ 517 (531)
.|+++++.++.. ....+|.+.|...++.+..|... + .++.||||++.. +.
T Consensus 303 -----~g~~~~i~~~~~-~~~~~~~~~L~~~gI~v~~~~~~----------------------~-~~~~iRis~~~~~e~ 353 (367)
T PRK02731 303 -----VGNFILVDFDDG-KDAAEAYQALLKRGVIVRPVAGY----------------------G-LPNALRITIGTEEEN 353 (367)
T ss_pred -----CceEEEEECCCC-CCHHHHHHHHHHCCEEEEeCCCC----------------------C-CCCeEEEecCCHHHH
Confidence 367899998432 34566777776566666554221 1 146899999842 33
Q ss_pred HHHHHHHHHHH
Q 009604 518 EDLKADVLQAL 528 (531)
Q Consensus 518 edli~dL~~AL 528 (531)
+.+++.|.+.+
T Consensus 354 ~~l~~aL~~~~ 364 (367)
T PRK02731 354 RRFLAALKEFL 364 (367)
T ss_pred HHHHHHHHHHH
Confidence 44444444444
No 128
>PRK14012 cysteine desulfurase; Provisional
Probab=99.87 E-value=1.3e-20 Score=200.44 Aligned_cols=283 Identities=19% Similarity=0.198 Sum_probs=181.7
Q ss_pred CcEEEeCChHHHHHHHHHHhc----cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC
Q 009604 216 ESTVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN 286 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all----~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~ 286 (531)
++++++++|++++.+++.++. ++||+|+++..+|.++...+. .++..|+++.+++. .|+++|+++|+++
T Consensus 67 ~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~-~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~- 144 (404)
T PRK14012 67 REIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCR-QLEREGFEVTYLDPQSNGIIDLEKLEAAMRDD- 144 (404)
T ss_pred CeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHH-HHHhCCCEEEEEccCCCCcCCHHHHHHhcCCC-
Confidence 457888888899999887763 789999999999988765553 34556888888764 3899999999874
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-ccccccCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
+++|++++++||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++|++++|++|++++.| .|+++.+++
T Consensus 145 t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g---~G~l~~~~~ 221 (404)
T PRK14012 145 TILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKG---IGALYVRRK 221 (404)
T ss_pred CEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCCc---eEEEEEecC
Confidence 99999999999999999999999999999999999999876543 34445689999999999887654 355544443
Q ss_pred HHHHHHHHhh-------hcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 366 LVTQIRNLHH-------VLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 366 li~~l~~~~~-------~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
...++..... ...++.+......+..+++ .+..+.++..+.++.+.+.|++.+.+... .+. . +.
T Consensus 222 ~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~-~~~-~-~~-- 296 (404)
T PRK14012 222 PRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLN-GDL-E-QR-- 296 (404)
T ss_pred CCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEe-CCc-c-cc--
Confidence 2222211100 0011112111111112222 22334455566677777778777766421 110 0 00
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCccccc-ccCccccccCCCHHHHHhcCC----CCCeEE
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV-DQPAIMSYWDLSQSERLKYGI----MDNLVR 509 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli-~~p~~~s~~~~~~~~~~~~gi----~~~lIR 509 (531)
......++|.+... ..++..|+ +++++.|..+... .+|. .....+++ ..+.||
T Consensus 297 -------~~~~~~~~~~~~~~----~~~~~~l~--~~~i~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~iR 354 (404)
T PRK14012 297 -------VPGNLNVSFNYVEG----ESLIMALK--DLAVSSGSACTSASLEPS---------YVLRALGLNDELAHSSIR 354 (404)
T ss_pred -------CCCEEEEEEeCcCH----HHHHHhCC--CeEEEchhhhCCCCCCCC---------HHHHHcCCChhhcCceEE
Confidence 00112456665321 34666665 5666766544321 1111 11122343 357899
Q ss_pred EEecCCCHHHHHHHHHHHHHh
Q 009604 510 FSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 510 lSvGlE~~edli~dL~~AL~~ 530 (531)
||++..++++.++.+.++|++
T Consensus 355 ls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 355 FSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred EEecCCCCHHHHHHHHHHHHH
Confidence 999999888888888888764
No 129
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.87 E-value=5.2e-20 Score=195.14 Aligned_cols=235 Identities=18% Similarity=0.203 Sum_probs=160.0
Q ss_pred cEEEeCCh-HHHHHHHHHHhccCCCE--EEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCC
Q 009604 217 STVIMASG-MSASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNN 286 (531)
Q Consensus 217 ~~i~~sSG-~~Ai~~al~all~pGD~--VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~ 286 (531)
+.|++++| ++++.+++.++++|||+ |+++.|.|..... .+...|+++..++. .|++++++++.+ +
T Consensus 91 ~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~ 165 (393)
T TIGR03538 91 RHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEG----AALLAGAEPYFLNCTAENGFLPDFDAVPESVWR-R 165 (393)
T ss_pred ceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHH----HHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh-c
Confidence 34555555 59999999999999996 9999999977543 34456777776653 267889888876 4
Q ss_pred cEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc---cc-------cccC-----CcEEEECCccc
Q 009604 287 VSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---KA-------LSLG-----ADLVLHSATKF 348 (531)
Q Consensus 287 tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~---~~-------l~~g-----aDivv~S~sK~ 348 (531)
+|+|++++|+||||.+++ +++|+++|+++|++||+||+|...... .+ ...+ .-+++.|+||.
T Consensus 166 ~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 245 (393)
T TIGR03538 166 CQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKR 245 (393)
T ss_pred ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhh
Confidence 999999999999999998 678888899999999999998643211 01 0112 23889999998
Q ss_pred cccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 349 IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 349 lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
++..|.+ .|++++++++++.+.......+...+......+...+. .+....+...++...+.+.|+++ + .+..
T Consensus 246 ~~~~GlR-vG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--~-~~~~ 321 (393)
T TIGR03538 246 SNLPGLR-SGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--L-DLEL 321 (393)
T ss_pred cCCcccc-eEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh--C-cccC
Confidence 8777644 78899999998888776654444444444443333332 23333344456666677777654 1 1122
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcc
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCE 479 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~ 479 (531)
|. .|..++++++.+ ..+|.+.| +..++.+..|..+
T Consensus 322 p~----------------gg~f~~~~~~~~---~~~~~~~l~~~~gV~v~pg~~f 357 (393)
T TIGR03538 322 PD----------------AGFYLWPKVPGD---DEAFARALYEEENVTVLPGRFL 357 (393)
T ss_pred CC----------------eeEEEEEECCCC---HHHHHHHHHHHCCEEEeCCccc
Confidence 21 467888988622 34566665 4467777777543
No 130
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.87 E-value=8.2e-20 Score=193.60 Aligned_cols=270 Identities=13% Similarity=0.154 Sum_probs=174.2
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHHHHhccC--CCc
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGLEAALNN--NNV 287 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~~--~~t 287 (531)
++++++++|++|+.+++.+++++||+|+++.|+|.+.... ++..|+++..++. .|+++|++++++ .++
T Consensus 92 ~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 167 (391)
T PRK07309 92 NEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPI----VNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKL 167 (391)
T ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHH----HHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCe
Confidence 4577777777999999999999999999999999986543 3445777777653 368999988864 148
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----cccc--cCCcEEEECCccccccCCCceE
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS--LGADLVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l~--~gaDivv~S~sK~lgg~g~v~g 357 (531)
++|++++|+||||.+.+ +++|+++|++||+++|+|++|...... .... ....+++.|+||.++.+|. ..
T Consensus 168 ~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-Rv 246 (391)
T PRK07309 168 KAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGW-RI 246 (391)
T ss_pred EEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccc-ee
Confidence 99999999999999986 778888999999999999998753321 1111 1234899999999986664 47
Q ss_pred EEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCch
Q 009604 358 GSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 433 (531)
Q Consensus 358 G~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~t----l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~ 433 (531)
|++++++++++.+...........+......+...++. .....++..+++..+.+.|+++ ++ .+..|.
T Consensus 247 G~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~~~p~------ 318 (391)
T PRK07309 247 GLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GF-KIIKPD------ 318 (391)
T ss_pred EEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CC-eecCCC------
Confidence 89999999998887654433223344433333333432 1112233445566677777765 22 122121
Q ss_pred hhhhhhhcCCcccEEEEEEcCCH-HHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE
Q 009604 434 HHIATQQMTGFGGVVSFEVDGDL-TATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS 511 (531)
Q Consensus 434 ~~l~~~~~~g~g~ivsf~l~g~~-~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlS 511 (531)
.|..+++.++.+. .....+.+.+ +..++.+..|..+. ...++.+||+
T Consensus 319 ----------gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~---------------------~~~~~~iRi~ 367 (391)
T PRK07309 319 ----------GAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFG---------------------PYGEGYVRLS 367 (391)
T ss_pred ----------eeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhC---------------------CCCCCEEEEE
Confidence 2345677776421 1234455443 33466666553321 0125789999
Q ss_pred ecCC--CHHHHHHHHHHHHH
Q 009604 512 FGVE--DFEDLKADVLQALH 529 (531)
Q Consensus 512 vGlE--~~edli~dL~~AL~ 529 (531)
++.+ +.++.++.|.+.++
T Consensus 368 ~~~~~~~l~~~i~~l~~~~~ 387 (391)
T PRK07309 368 YAASMETIKEAMKRLKEYME 387 (391)
T ss_pred ecCCHHHHHHHHHHHHHHHH
Confidence 9963 23344455555443
No 131
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.87 E-value=3.1e-20 Score=193.76 Aligned_cols=266 Identities=16% Similarity=0.151 Sum_probs=178.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcc----CC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCC
Q 009604 216 ESTVIMASGMSASTVMLLALVP----AG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN 285 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~----pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~ 285 (531)
+++++++++++++.+++.++.. +| |+|+++..+|++....+. .++..|++++.++. .|+++|+++++++
T Consensus 60 ~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~ 138 (353)
T TIGR03235 60 EEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIR-ALERNGFTVTYLPVDESGRIDVDELADAIRPD 138 (353)
T ss_pred CeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHH-HHHhcCCEEEEEccCCCCcCCHHHHHHhCCCC
Confidence 4566666667999998888753 56 789999888887665553 44566999888764 3789999999874
Q ss_pred CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-ccccccCCcEEEECCccccccCCCceEEEEEeCh
Q 009604 286 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 364 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~ 364 (531)
+++|++++++||||.+.|+++|.++|+++|+++++|++++.+.. .+...+++|+++.|++|++++.| .|+++.++
T Consensus 139 -~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g---~g~l~~~~ 214 (353)
T TIGR03235 139 -TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKG---IGALVIRK 214 (353)
T ss_pred -CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCc---eEEEEEcc
Confidence 99999999999999999999999999999999999999776533 34445689999999999987666 67777776
Q ss_pred HHHHH--HHHHh-------hhcCCCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCC
Q 009604 365 KLVTQ--IRNLH-------HVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSH 431 (531)
Q Consensus 365 ~li~~--l~~~~-------~~~G~~~s~~~a~l~l~~L~t----l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~ 431 (531)
+.... ++... ....++.+....+.+..+++. ++.+.+++.+.+..+.+.|++ ++++.+ .+. .
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~-~~~--~- 289 (353)
T TIGR03235 215 RGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT-LGVKLN-GDP--A- 289 (353)
T ss_pred CcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEe-CCc--c-
Confidence 54322 11100 011122332222222233332 234445566666777777765 555322 111 0
Q ss_pred chhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCC----Ce
Q 009604 432 PEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD----NL 507 (531)
Q Consensus 432 p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~----~l 507 (531)
....++++|.+++ ...+.+...|+. +++++.|..|+.- ...+...+..+|+++ +.
T Consensus 290 ----------~~~~~i~~~~~~~--~~~~~v~~~L~~-~i~v~~g~~~~~~--------~~~~~~~l~~~g~~~~~~~~~ 348 (353)
T TIGR03235 290 ----------ETIPHILNFSIDG--VNSEALIVNLRA-DAAVSTGSACSSS--------KYEPSHVLQAMGLDTDRARGA 348 (353)
T ss_pred ----------cccCCEEEEEeCC--cCHHHHHHHHhC-CeEEEchhhcCCC--------CCCCCHHHHHcCCCHHHhCcc
Confidence 1135789998875 234566666754 7888888665421 111235677888864 78
Q ss_pred EEEEe
Q 009604 508 VRFSF 512 (531)
Q Consensus 508 IRlSv 512 (531)
||+|+
T Consensus 349 ~r~s~ 353 (353)
T TIGR03235 349 IRFSW 353 (353)
T ss_pred EEEeC
Confidence 99985
No 132
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=3.4e-20 Score=195.36 Aligned_cols=262 Identities=15% Similarity=0.180 Sum_probs=170.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCC-EEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHHHHhccC---
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGG-HIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGLEAALNN--- 284 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD-~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~~--- 284 (531)
.+++++++++.+++..++.+++.+|| +|+++.|+|.... ..++..|+++..++. .|+++|++++++
T Consensus 91 ~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 166 (374)
T PRK02610 91 PANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYG----ILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQN 166 (374)
T ss_pred HHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcC
Confidence 34444444445899888888888886 8999999997654 344556888777653 368899988863
Q ss_pred CCcEEEEEeCCCCCCCcccCHHHHHHHHHh-cCCEEEEeCCCCCCccccc---cc-cCCcEEEECCccccccCCCceEEE
Q 009604 285 NNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKA---LS-LGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 285 ~~tklV~lesP~NPtG~v~dl~~I~~la~~-~gi~lIvD~a~a~~~~~~~---l~-~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
.++|+|++++|+||||.+++.+++.++++- ++++||+||+|........ +. ...-+++.|+||.+|.+|.+ .|+
T Consensus 167 ~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlR-iG~ 245 (374)
T PRK02610 167 PPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHR-VGY 245 (374)
T ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccc-eee
Confidence 359999999999999999998777666542 4899999999865422111 11 11237899999999877754 788
Q ss_pred EEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhh
Q 009604 360 ISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHI 436 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l 436 (531)
+++++++++.+......++ .+.....++...+ +.+..++++..+.+..+.+.|++++.+. + +|.
T Consensus 246 ~v~~~~l~~~l~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~--------- 312 (374)
T PRK02610 246 AIGHPELIAVLEKVRLPYN--LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLR-V-WPS--------- 312 (374)
T ss_pred eecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-e-CCC---------
Confidence 8899999988877653333 2333333333333 3333344444555666777887665542 2 232
Q ss_pred hhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-
Q 009604 437 ATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE- 515 (531)
Q Consensus 437 ~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE- 515 (531)
.|++++++++.+ .....|.+.|...++.+.. .++.||||+|.+
T Consensus 313 -------~g~f~~~~l~~~-~~~~~~~~~l~~~gi~v~~----------------------------~~~~lRls~~~~~ 356 (374)
T PRK02610 313 -------AANFLYLRLSQD-AALAALHQALKAQGTLVRH----------------------------TGGGLRITIGTPE 356 (374)
T ss_pred -------cceEEEEeCCCC-CCHHHHHHHHHHCCEEEEe----------------------------CCCeEEEeCCCHH
Confidence 367888888643 2345666666544433310 136799999963
Q ss_pred CHHHHHHHHHHHHHh
Q 009604 516 DFEDLKADVLQALHA 530 (531)
Q Consensus 516 ~~edli~dL~~AL~~ 530 (531)
+.++.++.|.++|.+
T Consensus 357 ~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 357 ENQRTLERLQAALTQ 371 (374)
T ss_pred HHHHHHHHHHHHHhh
Confidence 245566666666554
No 133
>PRK07683 aminotransferase A; Validated
Probab=99.86 E-value=1.8e-19 Score=190.73 Aligned_cols=257 Identities=14% Similarity=0.159 Sum_probs=167.8
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC------CHHHHHHhccCCCcEEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA------DMEGLEAALNNNNVSLF 290 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~------d~e~Le~al~~~~tklV 290 (531)
+.++++++++|+.+++.+++++||+|+++.++|......+ +..|+++.+++.+ |.+++++.+++ ++++|
T Consensus 91 ~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~i 165 (387)
T PRK07683 91 EIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPII----RLCGAKPVFIDTRSTGFRLTAEALENAITE-KTRCV 165 (387)
T ss_pred cEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHH----HHcCCEEEEeecCcccCCCCHHHHHHhcCc-CceEE
Confidence 5666666679999999999999999999999998755433 4458888777642 56889998877 48999
Q ss_pred EEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcccc---c-ccc----CCcEEEECCccccccCCCceEEE
Q 009604 291 FTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LSL----GADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 291 ~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~---~-l~~----gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
++++|+||||.+++ +++|+++|+++|+++|+|++|....... + ..+ +..+++.|+||.++.+|. ..|+
T Consensus 166 ~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGl-RiG~ 244 (387)
T PRK07683 166 VLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGW-RIGF 244 (387)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccc-eeEE
Confidence 99999999999986 6788899999999999999987542211 1 111 245889999999986654 4788
Q ss_pred EEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhh
Q 009604 360 ISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHH 435 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~ 435 (531)
+++++++++.+...........+......+...++ .+....++..++++.+.+.|.+. ++. +..|.
T Consensus 245 i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~~~-------- 314 (387)
T PRK07683 245 LFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLD-VEKPT-------- 314 (387)
T ss_pred EEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCC--------
Confidence 99999988888765433222233333322222232 22222334456667777777764 221 11111
Q ss_pred hhhhhcCCcccEEEEEEcCCHHHHHHHHHH-cCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009604 436 IATQQMTGFGGVVSFEVDGDLTATIKFIDA-LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 514 (531)
Q Consensus 436 l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~-L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl 514 (531)
.|.+++..+++.......|... ++..++.+..|..+. +..++.+||+++.
T Consensus 315 --------~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~---------------------~~~~~~~Ri~~~~ 365 (387)
T PRK07683 315 --------GAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFS---------------------EYGEGYVRLSYAY 365 (387)
T ss_pred --------eeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhC---------------------CCCCCeEEEEecC
Confidence 2345666665311122344433 455566666664321 0125789999997
Q ss_pred CCHHH
Q 009604 515 EDFED 519 (531)
Q Consensus 515 E~~ed 519 (531)
+.++
T Consensus 366 -~~~~ 369 (387)
T PRK07683 366 -SIET 369 (387)
T ss_pred -CHHH
Confidence 3443
No 134
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.86 E-value=1.4e-19 Score=191.12 Aligned_cols=269 Identities=16% Similarity=0.154 Sum_probs=179.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC---C--CcE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN---N--NVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~---~--~tk 288 (531)
|.++.+++++|++++..++.+++++||+|+++++.|.+....+ ...+.++..++..|++++++.+++ . +++
T Consensus 101 g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 176 (397)
T PRK06939 101 GTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGV----RLCKAKRYRYANNDMADLEAQLKEAKEAGARHK 176 (397)
T ss_pred CCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHH----HhcCCceEEeCCCCHHHHHHHHHhhhccCCCCe
Confidence 6678999999999999999999999999999999998765443 333556666666788888888753 1 488
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc-------c--cccCCcEEEECCccccccCCCceEEE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------A--LSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-------~--l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+|++++..|++|.+.++++|.++|+++|++||+|++|..++... . +..+.|+++.|+||.++|. .+|+
T Consensus 177 ~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~---r~G~ 253 (397)
T PRK06939 177 LIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA---SGGY 253 (397)
T ss_pred EEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc---CceE
Confidence 99998899999999999999999999999999999986432111 1 1124689999999999654 3799
Q ss_pred EEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 360 ISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 360 iv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~L~tl---~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
+++++++++.++.... .+++...+..++.+...++.+ ....++..++++.+.+.|+++. +. + .+
T Consensus 254 v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~-~-~~-------- 322 (397)
T PRK06939 254 TAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAG-FT-L-GP-------- 322 (397)
T ss_pred EEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CC-c-CC--------
Confidence 9999988888775432 223333343333333344433 2344555677777888887642 11 1 11
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 514 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl 514 (531)
+.++++.+.++. .....+|.+.|...++.+. ++.+ +.. +-..+.|||+++.
T Consensus 323 --------~~~~~~~~~~~~-~~~~~~~~~~L~~~gI~v~-~~~~-----~~~--------------~~~~~~iRi~~~~ 373 (397)
T PRK06939 323 --------GEHPIIPVMLGD-AKLAQEFADRLLEEGVYVI-GFSF-----PVV--------------PKGQARIRTQMSA 373 (397)
T ss_pred --------CCCCEEEEEECC-HHHHHHHHHHHHHCCceEe-eeCC-----CCC--------------CCCCceEEEEECC
Confidence 124566665643 2345677777755566655 2211 100 0013689999987
Q ss_pred CCHHHHHHHHHHHHH
Q 009604 515 EDFEDLKADVLQALH 529 (531)
Q Consensus 515 E~~edli~dL~~AL~ 529 (531)
..+++.++.+.++|+
T Consensus 374 ~~~~~~i~~~l~~L~ 388 (397)
T PRK06939 374 AHTKEQLDRAIDAFE 388 (397)
T ss_pred CCCHHHHHHHHHHHH
Confidence 544444444444443
No 135
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=9e-20 Score=191.91 Aligned_cols=264 Identities=16% Similarity=0.250 Sum_probs=170.8
Q ss_pred cEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC----CCCHHHHHHhccCCCcEEEE
Q 009604 217 STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID----PADMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd----~~d~e~Le~al~~~~tklV~ 291 (531)
+.|++++|+ +++..++..++++||+|+++.|+|......+ ...|.++..++ ..|++++++.+...++++|+
T Consensus 85 ~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~ 160 (369)
T PRK08153 85 ENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHV----AGFGGRLVTVPYRDDREDLDALLDAARRENAPLVY 160 (369)
T ss_pred HHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHH----HHcCCeEEEeeCCCCCCCHHHHHHHhcccCCcEEE
Confidence 355566665 8999999999999999999999998754333 33466666554 33678887766543589999
Q ss_pred EeCCCCCCCcccCHHHHHHHHHhc--CCEEEEeCCCCCCccc---cccc--cCCcEEEECCccccccCCCceEEEEEeCh
Q 009604 292 TESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ---KALS--LGADLVLHSATKFIGGHNDVLAGSISGSG 364 (531)
Q Consensus 292 lesP~NPtG~v~dl~~I~~la~~~--gi~lIvD~a~a~~~~~---~~l~--~gaDivv~S~sK~lgg~g~v~gG~iv~~~ 364 (531)
+++|+||||.+.+.+++.++++.. |++||+||+|...... ..+. ....+++.|+||.+|.+|. ..|++++++
T Consensus 161 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl-RiG~~v~~~ 239 (369)
T PRK08153 161 LANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGA-RVGYAIGAP 239 (369)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcch-heeeeecCH
Confidence 999999999999988887777643 8999999998643221 1111 1234889999999986654 468899999
Q ss_pred HHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhc
Q 009604 365 KLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM 441 (531)
Q Consensus 365 ~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~ 441 (531)
++++.+......++ .++...+.+...++ .+....+...++.+.+.+.|++. ++. .+|.
T Consensus 240 ~~~~~l~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~--~~p~-------------- 300 (369)
T PRK08153 240 GTIKAFDKVRNHFG--MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLT--PLPS-------------- 300 (369)
T ss_pred HHHHHHHHhhcCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCc--cCCC--------------
Confidence 98888876654433 45555444444443 22233344446666677777754 221 1222
Q ss_pred CCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-CHHHH
Q 009604 442 TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-DFEDL 520 (531)
Q Consensus 442 ~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE-~~edl 520 (531)
.++++++.++.+...+..+++.|...++.+.. |.. +-.++++|||++.+ +.+.+
T Consensus 301 --~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~---------p~~--------------~~~~~~iRis~~~~~~~~~~ 355 (369)
T PRK08153 301 --ATNFVAIDCGRDGAFARAVLDGLIARDIFVRM---------PGV--------------APLDRCIRVSCGPDEELDLF 355 (369)
T ss_pred --cCcEEEEECCCCcccHHHHHHHHHHCCeEEee---------CCC--------------CCCCCeEEEecCCHHHHHHH
Confidence 35677777743224466778877655555421 110 00146899999942 34455
Q ss_pred HHHHHHHHH
Q 009604 521 KADVLQALH 529 (531)
Q Consensus 521 i~dL~~AL~ 529 (531)
++.|.+.+.
T Consensus 356 ~~al~~~~~ 364 (369)
T PRK08153 356 AEALPEALE 364 (369)
T ss_pred HHHHHHHHH
Confidence 555555543
No 136
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.86 E-value=2.6e-19 Score=190.68 Aligned_cols=269 Identities=19% Similarity=0.168 Sum_probs=186.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhcc---CCCcE
Q 009604 214 GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN---NNNVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~--pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~---~~~tk 288 (531)
|.+.+++++||++|+..++..+.+ +||.|+++...|+.+...+ ...|.++..++..|++++++.++ +.+++
T Consensus 104 g~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~----~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~ 179 (406)
T PRK13393 104 GKEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGI----RHSRAEKRIFRHNDPADLERKLSDLDPHRPK 179 (406)
T ss_pred CCCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHH----HHcCCeEEEeCCCCHHHHHHHHHhccCCCCE
Confidence 788999999999999999987765 7888888887887765443 23466777777788888887775 22479
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc---------ccccCCcEEEECCccccccCCCceEEE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~---------~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+|++|+++|++|.+.|+++|.++|+++|+++|+|++++.++... .+....|+++.|++|.++.. ||+
T Consensus 180 ~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~----GG~ 255 (406)
T PRK13393 180 LVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM----GGY 255 (406)
T ss_pred EEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc----Cce
Confidence 99999999999999999999999999999999999986443210 01122588889999999865 588
Q ss_pred EEeChHHHHHHHHHhhh--cCCCchHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 360 ISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~L~tl~---~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
+++++++++.++..... ++...++..+..+...++.+. .+.++..++.+++.+.|++. +. +..
T Consensus 256 ~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-----~~~------ 323 (406)
T PRK13393 256 ITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA-GI-----PHL------ 323 (406)
T ss_pred eeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CC-----CcC------
Confidence 88898888887765432 344555555554445555432 23344556777888888753 21 111
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 513 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~-~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG 513 (531)
.+.++++.+.+. +.....++.+.|.. .++.++.+. .|.. + ...+.||||+.
T Consensus 324 -------~~~~~i~~v~~~-~~~~~~~l~~~L~~~~Gi~v~~~~------~p~~------p--------~g~~~iRis~~ 375 (406)
T PRK13393 324 -------PNPSHIVPVMVG-DPVLCKQISDELLDRYGIYVQPIN------YPTV------P--------RGTERLRITPS 375 (406)
T ss_pred -------CCCCCeEEEEeC-CHHHHHHHHHHHHHhCCEEEEeEC------CCCC------C--------CCCceEEEEEC
Confidence 123668888774 33455667777644 355554331 1211 0 12367999999
Q ss_pred CCCHHHHHHHHHHHHHh
Q 009604 514 VEDFEDLKADVLQALHA 530 (531)
Q Consensus 514 lE~~edli~dL~~AL~~ 530 (531)
+.++++.++.+.++|++
T Consensus 376 ~~~t~edid~l~~~l~~ 392 (406)
T PRK13393 376 PLHTDADIEHLVQALSE 392 (406)
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 98888888888877764
No 137
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.86 E-value=1.6e-19 Score=190.63 Aligned_cols=289 Identities=20% Similarity=0.178 Sum_probs=198.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHHHHhcc---
Q 009604 214 GAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGLEAALN--- 283 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~al-l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~--- 283 (531)
|.+++++++||++|+.+++.++ +++||+|+++.++|.++... +...|+++.++|. .|+++++++++
T Consensus 43 g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~----~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~ 118 (380)
T TIGR03588 43 GAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANC----ALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAK 118 (380)
T ss_pred CCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHH----HHHcCCEEEEEecCCCcCCcCHHHHHHHhhccc
Confidence 6677899999999999999998 89999999999999876533 3456888888875 37899999998
Q ss_pred -CCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCC----cEEEECCc--cccccCCCce
Q 009604 284 -NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA----DLVLHSAT--KFIGGHNDVL 356 (531)
Q Consensus 284 -~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~ga----Divv~S~s--K~lgg~g~v~ 356 (531)
+ +|++|++ +|++|...|+++|.++|+++|++||+|++++.+...+....|. |++++|++ |+++...
T Consensus 119 ~~-~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~~--- 191 (380)
T TIGR03588 119 GK-LPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTAE--- 191 (380)
T ss_pred CC-CceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCcccccC---
Confidence 5 4899885 5678999999999999999999999999987664333333444 99999987 8887543
Q ss_pred EEEEEeC-hHHHHHHHHHhh-------------------------hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009604 357 AGSISGS-GKLVTQIRNLHH-------------------------VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 410 (531)
Q Consensus 357 gG~iv~~-~~li~~l~~~~~-------------------------~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~L 410 (531)
||+++.+ +++.++++..+. .++..++...+.+.+..|+.++.+.++..++++.+
T Consensus 192 GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~ 271 (380)
T TIGR03588 192 GGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLDRFVAKRREIAARY 271 (380)
T ss_pred ceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777764 566666654321 01234466677777778999999999999999999
Q ss_pred HHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC-CHHHHHHHHHHcCCCCcccccCCcccccccCcccc
Q 009604 411 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 489 (531)
Q Consensus 411 a~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g-~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s 489 (531)
.+.|.+.+.+. +..+...... ...+..+.++. .....+++.+.|+..++.+..+.. .+..+|....
T Consensus 272 ~~~L~~~~~~~-~~~~~~~~~~-----------~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~-~~~~~~~~~~ 338 (380)
T TIGR03588 272 DRLLKDLPYFT-PLTIPLGSKS-----------AWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYI-PVHLQPYYRQ 338 (380)
T ss_pred HHHhcCCCCcc-CCCCCCCCEe-----------EEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCc-ccccChhhhc
Confidence 99998877553 1111100000 01123333431 112345677777666766664422 2222232111
Q ss_pred ---ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 490 ---YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 490 ---~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
...++..+. +....|+|.++..-+++.++.+.++|++
T Consensus 339 ~~~~~~~p~a~~----~~~~~l~lP~~~~l~~~dv~~i~~~l~~ 378 (380)
T TIGR03588 339 GFGDGDLPSAEN----FYLAEISLPLHPALTLEQQQRVVETLRK 378 (380)
T ss_pred cCCcCCCcHHHH----HHhceEEcCCCCCCCHHHHHHHHHHHHH
Confidence 111222211 2357899999988788888888888875
No 138
>PRK09082 methionine aminotransferase; Validated
Probab=99.86 E-value=6.3e-20 Score=194.11 Aligned_cols=260 Identities=17% Similarity=0.125 Sum_probs=171.1
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHHHHhccCCCcEEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~~~~tklV 290 (531)
+++++++|++|+.+++.+++++||+|+++.+.|......+ +..|.++..++. .|++++++++++ ++++|
T Consensus 93 ~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v 167 (386)
T PRK09082 93 EITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAI----ELAGGRAVRVALQPPDFRVDWQRFAAAISP-RTRLI 167 (386)
T ss_pred cEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEEecCcccccCCHHHHHHhcCc-cceEE
Confidence 4555566679999999999999999999999998865444 345777776654 278899999987 49999
Q ss_pred EEeCCCCCCCccc---CHHHHHHHHHhcCCEEEEeCCCCCCcc-----ccccc----cCCcEEEECCccccccCCCceEE
Q 009604 291 FTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS----LGADLVLHSATKFIGGHNDVLAG 358 (531)
Q Consensus 291 ~lesP~NPtG~v~---dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~~l~----~gaDivv~S~sK~lgg~g~v~gG 358 (531)
++++|+||||.+. ++++|.++|+++|+++|+|++|..... ..... ....+++.|+||.++..|. ..|
T Consensus 168 ~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG 246 (386)
T PRK09082 168 ILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGW-KVG 246 (386)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhh-hhh
Confidence 9999999999885 577889999999999999999754321 11111 1345899999999986664 468
Q ss_pred EEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 359 SISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 359 ~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
++++++++++.++..........+......+...++ .+....+...++...+.+.|+++ ++. + +|.
T Consensus 247 ~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~-~~~------- 316 (386)
T PRK09082 247 YCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFK-L-LPC------- 316 (386)
T ss_pred hhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCc-c-cCC-------
Confidence 899999999888776543333344433332222222 22223344456777788888764 221 1 111
Q ss_pred hhhhhhcCCcccEEEEEEcC-CHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe
Q 009604 435 HIATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF 512 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g-~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSv 512 (531)
..|.++++.++. .......|.+.| +..++.+..|+.+... +...+.+||++
T Consensus 317 --------~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~-------------------~~~~~~~Ri~~ 369 (386)
T PRK09082 317 --------EGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYAD-------------------PFPHRLVRLCF 369 (386)
T ss_pred --------CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCC-------------------CCCCCEEEEEe
Confidence 124467778752 112345565654 4556666666432110 11357899999
Q ss_pred cCCCHHHH
Q 009604 513 GVEDFEDL 520 (531)
Q Consensus 513 GlE~~edl 520 (531)
+. +.+++
T Consensus 370 ~~-~~~~l 376 (386)
T PRK09082 370 AK-QEETL 376 (386)
T ss_pred cC-CHHHH
Confidence 97 44433
No 139
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.86 E-value=1.9e-19 Score=191.47 Aligned_cols=269 Identities=21% Similarity=0.210 Sum_probs=183.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhcc---CCCcE
Q 009604 214 GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN---NNNVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~--pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~---~~~tk 288 (531)
|.+++++++||++|+..++..+.+ +||.|+.+...|..+... ++..|+++..++..|++++++.++ +.+++
T Consensus 104 g~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~ 179 (402)
T TIGR01821 104 GKESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEG----IRHSGAEKFIFRHNDVAHLEKLLQSVDPNRPK 179 (402)
T ss_pred CCCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHH----HHHcCCeEEEECCCCHHHHHHHHHhccCCCCe
Confidence 678899999999999999987765 788887776666554433 334577776677778888888775 22489
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc---------ccccCCcEEEECCccccccCCCceEEE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~---------~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+|++|+|+||+|.+.|+++|.++|+++|++||+|++|+.++... .+....|+++.|++|.+++. ||+
T Consensus 180 ~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~----GG~ 255 (402)
T TIGR01821 180 IIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVV----GGY 255 (402)
T ss_pred EEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccC----Cce
Confidence 99999999999999999999999999999999999987432210 01123689999999999965 488
Q ss_pred EEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 360 ISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 360 iv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~L~tl~---~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
+++++++++.++.... .+....++..++.++..++.+. .+.++..++.+++.+.|+++ ++ +.+++
T Consensus 256 i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-----~~~~~---- 325 (402)
T TIGR01821 256 IAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL-GI-----PVIPN---- 325 (402)
T ss_pred eecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc-CC-----CcCCC----
Confidence 8899888888765433 2334456655555555555443 33445557788888888764 22 11111
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 513 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~-~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG 513 (531)
.++++.|.++ ....+..+.+.|. ..++.++... .|.. + .....||||+.
T Consensus 326 ---------~~~i~~i~~~-~~~~a~~~~~~L~~~~Gi~v~~~~------~p~~------~--------~g~~~lRis~~ 375 (402)
T TIGR01821 326 ---------PSHIVPVIIG-DAALCKKVSDLLLNKHGIYVQPIN------YPTV------P--------RGTERLRITPT 375 (402)
T ss_pred ---------CCCEEEEEeC-CHHHHHHHHHHHHhcCCEEEEeEC------CCCC------C--------CCCceEEEEeC
Confidence 2567888774 3344566777763 3354444321 1210 0 12368999998
Q ss_pred CCCHHHHHHHHHHHHHh
Q 009604 514 VEDFEDLKADVLQALHA 530 (531)
Q Consensus 514 lE~~edli~dL~~AL~~ 530 (531)
..++++.++.+.++|++
T Consensus 376 ~~~t~edi~~~~~~l~~ 392 (402)
T TIGR01821 376 PAHTDKMIDDLVEALLL 392 (402)
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 87777777777766653
No 140
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=2.1e-20 Score=196.52 Aligned_cols=253 Identities=15% Similarity=0.197 Sum_probs=171.2
Q ss_pred cEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----CCHHHHHHhccCCCcEEEE
Q 009604 217 STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~d~e~Le~al~~~~tklV~ 291 (531)
+.|++++|+ +++.+++.+++++||+|+++.|+|.... ..++..|+++..++. .|+++|++++++ ++++|+
T Consensus 82 ~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~-~~~~v~ 156 (366)
T PRK01533 82 EQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYR----HHAIIEGCEVKEVALNNGVYDLDEISSVVDN-DTKIVW 156 (366)
T ss_pred ceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHH----HHHHHcCCEEEEeecCCCCcCHHHHHHHhCc-CCcEEE
Confidence 345555554 9999999999999999999999997654 344556888877754 478999999877 489999
Q ss_pred EeCCCCCCCcccCHHHHHHHHH---hcCCEEEEeCCCCCCccc----cc---c-ccCCcEEEECCccccccCCCceEEEE
Q 009604 292 TESPTNPFLRCVDVKLVSDLCH---KKGAIVCIDGTFATPLNQ----KA---L-SLGADLVLHSATKFIGGHNDVLAGSI 360 (531)
Q Consensus 292 lesP~NPtG~v~dl~~I~~la~---~~gi~lIvD~a~a~~~~~----~~---l-~~gaDivv~S~sK~lgg~g~v~gG~i 360 (531)
+++|+||||.+++.+++.++++ +++ ++|+||+|...... .. + ..+..+++.|+||.++.+|.+ .|++
T Consensus 157 i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlR-iG~~ 234 (366)
T PRK01533 157 ICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFR-VGYA 234 (366)
T ss_pred EeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHH-HhHH
Confidence 9999999999999776666654 444 67889997643211 11 1 123458999999999977755 6888
Q ss_pred EeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhh
Q 009604 361 SGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIA 437 (531)
Q Consensus 361 v~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~ 437 (531)
++++++++.++..... ...+.....++...++ .+....+...++.+.+.+.|+.+ ++. + +|
T Consensus 235 i~~~~~~~~l~~~~~~--~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~-~~----------- 298 (366)
T PRK01533 235 VGHEELIEKLNVVRLP--FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIP-F-YQ----------- 298 (366)
T ss_pred hCCHHHHHHHHHhcCC--CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-c-CC-----------
Confidence 8899999988776532 3345554444444443 22233344445666677777655 221 1 11
Q ss_pred hhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-C
Q 009604 438 TQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-D 516 (531)
Q Consensus 438 ~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE-~ 516 (531)
..|+++++.+++ ...+.+.|...++.+.. . ++.||||+|.. +
T Consensus 299 -----~~~nf~~~~~~~----~~~~~~~l~~~GI~Vr~---------------------------~-~~~iRis~~~~~~ 341 (366)
T PRK01533 299 -----SQTNFIFLPVEN----GGEIYEACAHAGFIIRP---------------------------F-PNGVRITVGTREQ 341 (366)
T ss_pred -----CcCcEEEEeCCC----HHHHHHHHHHCCcEEcc---------------------------C-CCceEEeCCCHHH
Confidence 136788998852 24566666555544431 0 25699999964 5
Q ss_pred HHHHHHHHHHHHH
Q 009604 517 FEDLKADVLQALH 529 (531)
Q Consensus 517 ~edli~dL~~AL~ 529 (531)
.+.+++.|.+.++
T Consensus 342 ~~~l~~al~~~~~ 354 (366)
T PRK01533 342 NEGVISVLQQHFE 354 (366)
T ss_pred HHHHHHHHHHHHH
Confidence 6778888877664
No 141
>PRK08175 aminotransferase; Validated
Probab=99.86 E-value=1.2e-19 Score=192.66 Aligned_cols=262 Identities=15% Similarity=0.159 Sum_probs=169.4
Q ss_pred EEEeCCh-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----CHHHHHHhccC--CCcEEE
Q 009604 218 TVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----DMEGLEAALNN--NNVSLF 290 (531)
Q Consensus 218 ~i~~sSG-~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----d~e~Le~al~~--~~tklV 290 (531)
.+++++| ++++.+++..+++|||+|+++.|+|......+ ...|+++..++.+ +.++++++++. .++++|
T Consensus 93 ~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v 168 (395)
T PRK08175 93 EAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGA----VIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMM 168 (395)
T ss_pred cEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCeEEEEecccCCCcHHHHHHHHhhccCCceEE
Confidence 3445555 49999999999999999999999998754333 3457777766542 47888887763 248999
Q ss_pred EEeCCCCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCCcc-----cccc--c--cCCcEEEECCccccccCCCceEE
Q 009604 291 FTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN-----QKAL--S--LGADLVLHSATKFIGGHNDVLAG 358 (531)
Q Consensus 291 ~lesP~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~~~-----~~~l--~--~gaDivv~S~sK~lgg~g~v~gG 358 (531)
++++|+||||.+.+. ++|.++|+++|+++|+|++|..... .... . .+..+++.|+||.+|.+|.+ .|
T Consensus 169 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlR-iG 247 (395)
T PRK08175 169 ILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWR-IG 247 (395)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchh-he
Confidence 999999999999987 6888899999999999999754321 1111 1 12347789999999877654 68
Q ss_pred EEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 359 SISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 359 ~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
++++++++++.+...........+......+...++ .+....+...+++..+.+.|+++ ++ .+..|.
T Consensus 248 ~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~-~~~~p~------- 318 (395)
T PRK08175 248 FMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GW-MVEMPK------- 318 (395)
T ss_pred eeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CC-cccCCC-------
Confidence 889999999988776554333222222222222222 22333344456667778888765 22 122121
Q ss_pred hhhhhhcCCcccEEEEEEcCCH--HHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE
Q 009604 435 HIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS 511 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~--~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlS 511 (531)
.|.+++++++... ....+|.+.+ +..++.+..|..+. + ..++.+||+
T Consensus 319 ---------~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~----~-----------------~~~~~lRis 368 (395)
T PRK08175 319 ---------ASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFG----D-----------------YGDTHVRFA 368 (395)
T ss_pred ---------EEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhC----c-----------------CCCCeEEEE
Confidence 4678999987431 1245666554 45576666654321 0 124689999
Q ss_pred ecCCCHHHHHHHH
Q 009604 512 FGVEDFEDLKADV 524 (531)
Q Consensus 512 vGlE~~edli~dL 524 (531)
++. +.+.+.+.|
T Consensus 369 ~~~-~~~~~~~al 380 (395)
T PRK08175 369 LIE-NRDRIRQAI 380 (395)
T ss_pred eCC-CHHHHHHHH
Confidence 984 444443333
No 142
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.86 E-value=2.4e-19 Score=196.77 Aligned_cols=198 Identities=13% Similarity=0.135 Sum_probs=130.2
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCcE
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNVS 288 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~tk 288 (531)
+++++++++++++.+++.+++++||+|+++.|.|..... .+...|.++..++. .|+++|+++++++ +|
T Consensus 209 ~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~----~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~-~k 283 (517)
T PRK13355 209 DDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA----CVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSR-TK 283 (517)
T ss_pred hHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH----HHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcC-ce
Confidence 444444444599999999999999999999999987543 33445777666542 3789999999874 99
Q ss_pred EEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----cccccCCc---EEEECCccccccCCCceE
Q 009604 289 LFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSLGAD---LVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 289 lV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l~~gaD---ivv~S~sK~lgg~g~v~g 357 (531)
+|++++|+||||.+++ +++|+++|++||++||+||+|...... ....+..| +++.|+||.++..|.+ .
T Consensus 284 ~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~R-i 362 (517)
T PRK13355 284 AIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYR-I 362 (517)
T ss_pred EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccc-e
Confidence 9999999999999998 778889999999999999998643211 11122122 4469999999877765 5
Q ss_pred EEEE--eChHHH----HHHHHHhhhcCCCchHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHcCCCc
Q 009604 358 GSIS--GSGKLV----TQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 358 G~iv--~~~~li----~~l~~~~~~~G~~~s~~~a~l~l~~L~------tl~~r~~~~~~na~~La~~L~~~p~v 420 (531)
|+++ ++++++ +.+..... .....+....+++...|+ ......++..+++..+.+.|++.|++
T Consensus 363 G~~i~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 436 (517)
T PRK13355 363 GWMILSGNKRIAKDYIEGLNMLAN-MRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGI 436 (517)
T ss_pred EEEEeeCchhhHHHHHHHHHHHhc-CcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 6666 444433 33322221 112233333333333332 11111233445567777888776554
No 143
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=6.4e-20 Score=190.26 Aligned_cols=255 Identities=19% Similarity=0.214 Sum_probs=160.4
Q ss_pred EEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----CHHHHHHhccCCCcEEEEE
Q 009604 218 TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----DMEGLEAALNNNNVSLFFT 292 (531)
Q Consensus 218 ~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----d~e~Le~al~~~~tklV~l 292 (531)
.|++++|+ +++.+++. ++++|+ |++..|+|.... ..++..|+++..++.+ |.+.++ ..++|+|++
T Consensus 59 ~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~----~~~~~~G~~v~~vp~~~~~~~~~~l~----~~~~k~v~l 128 (332)
T PRK06425 59 KVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYK----GYAFTHGIRISALPFNLINNNPEILN----NYNFDLIFI 128 (332)
T ss_pred eEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHH----HHHHHcCCeEEEEeCCcccCcHHHHh----hcCCCEEEE
Confidence 35555555 89988886 567775 666688887644 4455668888877643 333333 225899999
Q ss_pred eCCCCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCCcccc--c-c----ccCCcEEEECCccccccCCCceEEEEEe
Q 009604 293 ESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQK--A-L----SLGADLVLHSATKFIGGHNDVLAGSISG 362 (531)
Q Consensus 293 esP~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~~~~~--~-l----~~gaDivv~S~sK~lgg~g~v~gG~iv~ 362 (531)
++|+||||.+++. ++|.++|+++|++||+||+|....... + . ..+.-+++.|+||.++-+|.+ .|++++
T Consensus 129 ~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlR-iGy~v~ 207 (332)
T PRK06425 129 VSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLR-IGYIAT 207 (332)
T ss_pred eCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhh-heeeec
Confidence 9999999999984 566777889999999999987543211 1 1 112358889999999966644 688999
Q ss_pred ChHHHHHHHHHhhhcCCCchHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhh
Q 009604 363 SGKLVTQIRNLHHVLGGALNPNAAYLIIR-GMKT-LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQ 440 (531)
Q Consensus 363 ~~~li~~l~~~~~~~G~~~s~~~a~l~l~-~L~t-l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~ 440 (531)
++++++.+......+. .+...+..+.. ..+. +....+...++.+.+.+.|+++ ++. +..|.
T Consensus 208 ~~~li~~l~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~------------- 270 (332)
T PRK06425 208 DDYNMKISRKITEPWS--VCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFR-AAGDP------------- 270 (332)
T ss_pred CHHHHHHHHHcCCCCc--cCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ECCCC-------------
Confidence 9999888876543332 22222222111 1122 1233444556677788888765 332 22121
Q ss_pred cCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-CHHH
Q 009604 441 MTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-DFED 519 (531)
Q Consensus 441 ~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE-~~ed 519 (531)
.|+++++.++ + ..+|.+.|...++.+..|..+. +..+++||||+|.. +.+.
T Consensus 271 ---~g~f~~~~~~-~---~~~~~~~l~~~gi~v~~~~~f~---------------------~~~~~~iRis~~~~~~~~~ 322 (332)
T PRK06425 271 ---SANFITFMIP-D---AHDFYSYLLKNGILVRLLDDYE---------------------CLGEQYIRIAIRRRSFNIK 322 (332)
T ss_pred ---CceEEEEEcC-C---HHHHHHHHHHCCeEEEECCCCC---------------------CCCCCEEEEEeCCHHHHHH
Confidence 3678888885 2 3456666654566666553321 01257999999974 3455
Q ss_pred HHHHHHHHH
Q 009604 520 LKADVLQAL 528 (531)
Q Consensus 520 li~dL~~AL 528 (531)
+++.|.+.|
T Consensus 323 l~~al~~~~ 331 (332)
T PRK06425 323 LVNALRNFL 331 (332)
T ss_pred HHHHHHHHh
Confidence 666665543
No 144
>PRK08363 alanine aminotransferase; Validated
Probab=99.86 E-value=2.7e-19 Score=189.91 Aligned_cols=200 Identities=16% Similarity=0.139 Sum_probs=136.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe-CC------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI-DP------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~v-d~------~d~e~Le~al~~~~t 287 (531)
++++++++++++|+.+++.+++++||+|+++.++|......+ +..|..+..+ +. .|++++++++++ ++
T Consensus 93 ~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~-~~ 167 (398)
T PRK08363 93 PDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLV----KFYGGVPVEYRTIEEEGWQPDIDDIRKKITE-KT 167 (398)
T ss_pred hhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCEEEEeccccccCCcCCHHHHHhhCCc-ce
Confidence 456667776779999999999999999999999999865433 3445554444 21 368899999877 48
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----cccc---cCCcEEEECCccccccCCCceE
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS---LGADLVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~l~---~gaDivv~S~sK~lgg~g~v~g 357 (531)
++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .... ...-+++.|+||.++.+|.+ .
T Consensus 168 ~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlR-i 246 (398)
T PRK08363 168 KAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWR-L 246 (398)
T ss_pred EEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccce-E
Confidence 99999999999999997 788999999999999999998643211 1111 11247789999998877654 6
Q ss_pred EEEEe--ChHHHHHHHHHhhhc---CCCchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 009604 358 GSISG--SGKLVTQIRNLHHVL---GGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 358 G~iv~--~~~li~~l~~~~~~~---G~~~s~~~a~l~l~~L----~tl~~r~~~~~~na~~La~~L~~~p~v 420 (531)
|++++ ++++++.++...... ....+.....++...+ +.+....++..++...+.+.|.+++.+
T Consensus 247 G~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 318 (398)
T PRK08363 247 GYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGI 318 (398)
T ss_pred EEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 77775 666666665433211 1122333222222222 333444455667777788888876654
No 145
>PRK09265 aminotransferase AlaT; Validated
Probab=99.86 E-value=2.2e-19 Score=191.15 Aligned_cols=270 Identities=13% Similarity=0.076 Sum_probs=165.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC--C-----CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--P-----ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd--~-----~d~e~Le~al~~~~t 287 (531)
.+++++++++++++.+++.+++++||+|++++|+|......+ ...|..+..++ . .|+++++++++++ +
T Consensus 95 ~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~-~ 169 (404)
T PRK09265 95 VDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAV----SLSGGKPVHYLCDEEAGWFPDLDDIRSKITPR-T 169 (404)
T ss_pred cccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHH----HHcCCEEEEEecccccCCCCCHHHHHHhcccc-c
Confidence 344444444458899999999999999999999998755433 33455554432 1 3688999998774 9
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----ccccc--C-CcEEEECCccccccCCCce
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSL--G-ADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l~~--g-aDivv~S~sK~lgg~g~v~ 356 (531)
++|++++|+||||.+++ +++|.++|+++|++||+||+|...... ....+ . .-+++.|+||.++.+|.+
T Consensus 170 ~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR- 248 (404)
T PRK09265 170 KAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFR- 248 (404)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccc-
Confidence 99999999999999998 888999999999999999997643211 11111 1 236789999999877755
Q ss_pred EEEEEe--ChHH----HHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHH---HHHHHHHHHHHHHHHHHcCCCceEEe
Q 009604 357 AGSISG--SGKL----VTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHL---RVQQQNSTALRMAKILEAHPKVKRVH 424 (531)
Q Consensus 357 gG~iv~--~~~l----i~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~---r~~~~~~na~~La~~L~~~p~v~~V~ 424 (531)
.|+++. ++++ ++.+.... ......+.....++...+. .+.. ..++..+++..+.+.|++++++. +.
T Consensus 249 iG~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~-~~ 326 (404)
T PRK09265 249 VGWMVLSGPKKHAKGYIEGLDMLA-SMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVS-CV 326 (404)
T ss_pred eEEEEEeCchHHHHHHHHHHHHHh-ccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-cc
Confidence 566663 4443 33332221 1122233333333222222 1111 11344566677778887765532 22
Q ss_pred CCCCCCCchhhhhhhhcCCcccEEEEEEcCCH----HHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHh
Q 009604 425 YPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL----TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 500 (531)
Q Consensus 425 ~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~----~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~ 500 (531)
.|. .|..+++.++... ...+.+.+.+...++.+..|..+..
T Consensus 327 ~p~----------------~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~------------------- 371 (404)
T PRK09265 327 KPK----------------GALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNW------------------- 371 (404)
T ss_pred CCC----------------cceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCC-------------------
Confidence 221 3567888886421 1233444555556666666643210
Q ss_pred cCCCCCeEEEEecCC--CHHHHHHHHHHHHH
Q 009604 501 YGIMDNLVRFSFGVE--DFEDLKADVLQALH 529 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE--~~edli~dL~~AL~ 529 (531)
..++++||+++.. ..++.++.|.++|+
T Consensus 372 --~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 372 --PEPDHFRIVTLPRVDDLEEAIGRIGRFLS 400 (404)
T ss_pred --CCCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 1257899999842 34556666666664
No 146
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=4.6e-20 Score=192.94 Aligned_cols=257 Identities=17% Similarity=0.197 Sum_probs=167.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCCCcE
Q 009604 215 AESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVS 288 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~tk 288 (531)
.+++++++++++++.+++.+++++| |+|+++.|.|.... ..++..|+++..++.+ |++.++ .+ + ++|
T Consensus 77 ~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~----~~~~~~g~~v~~v~~~~~~~~~~~~l~-~~-~-~~~ 149 (354)
T PRK04635 77 PEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA----ISAETFNVGVKALPLTADYQLPLDYIE-QL-D-GAK 149 (354)
T ss_pred HHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEEecCCCCCCCHHHHH-hc-c-CCC
Confidence 3445544444599999999999999 89999999987533 3455678888777642 567776 34 4 489
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhc-CCEEEEeCCCCCCccccc----cc-cCCcEEEECCccccccCCCceEEEEEe
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKA----LS-LGADLVLHSATKFIGGHNDVLAGSISG 362 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~-gi~lIvD~a~a~~~~~~~----l~-~gaDivv~S~sK~lgg~g~v~gG~iv~ 362 (531)
+|++++|+||||.+.+.+++.++++.. +++||+||+|........ .. ...-+++.|+||+++.+|.+ .|++++
T Consensus 150 li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlR-lG~~i~ 228 (354)
T PRK04635 150 LVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGAR-CGFTLA 228 (354)
T ss_pred EEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHH-HhhhhC
Confidence 999999999999999999999998763 799999999865432111 11 12237899999999866644 688889
Q ss_pred ChHHHHHHHHHhhhcCCCchHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhh
Q 009604 363 SGKLVTQIRNLHHVLGGALNPNAAYLIIRG-----MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIA 437 (531)
Q Consensus 363 ~~~li~~l~~~~~~~G~~~s~~~a~l~l~~-----L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~ 437 (531)
++++++.+......++. +......+... .+.+..+.++..++++.+.+.|++++.+. + +|.
T Consensus 229 ~~~~~~~l~~~~~~~~~--~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~---------- 294 (354)
T PRK04635 229 NEELIEILMRVIAPYPV--PLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAK-V-LEG---------- 294 (354)
T ss_pred CHHHHHHHHhhcCCCCC--CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCC----------
Confidence 99998887754433322 22222222222 34444555666677788889998876442 2 222
Q ss_pred hhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH
Q 009604 438 TQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF 517 (531)
Q Consensus 438 ~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~ 517 (531)
.|+++++.++. . ..|.+.|...++.+..++. + + .++.||||+|.
T Consensus 295 ------~g~f~~~~~~~-~---~~~~~~l~~~gv~v~~~~~------~----------------~-~~~~lRis~~~--- 338 (354)
T PRK04635 295 ------NGNYVLAKFDD-V---DAVFKALWDAGIVARAYKD------P----------------R-LANCIRFSFSN--- 338 (354)
T ss_pred ------CCcEEEEECCC-H---HHHHHHHHHCCEEEEECCC------C----------------C-CCCeEEEEeCC---
Confidence 25677777753 2 3444445444554432110 0 0 24689999984
Q ss_pred HHHHHHHHHHHH
Q 009604 518 EDLKADVLQALH 529 (531)
Q Consensus 518 edli~dL~~AL~ 529 (531)
++.++.|.++|+
T Consensus 339 ~e~~~~l~~al~ 350 (354)
T PRK04635 339 RAETDKLIGLIR 350 (354)
T ss_pred HHHHHHHHHHHH
Confidence 344555555554
No 147
>PRK09148 aminotransferase; Validated
Probab=99.86 E-value=2.6e-19 Score=190.70 Aligned_cols=263 Identities=13% Similarity=0.098 Sum_probs=168.9
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----CHHHHHHhcc---CCCcEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----DMEGLEAALN---NNNVSL 289 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----d~e~Le~al~---~~~tkl 289 (531)
++++++++++++.+++.+++++||+|++++|+|......+ ...|+++..++.. .+++++++++ + ++++
T Consensus 94 ~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~-~~~~ 168 (405)
T PRK09148 94 QVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGF----IMAGGVIRSVPAEPDEEFFPALERAVRHSIP-KPIA 168 (405)
T ss_pred cEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHH----HhcCCEEEEEeCCCCCCCccCHHHHHhhccc-cceE
Confidence 4555555559999999999999999999999998864333 4458887776532 3344544443 4 4899
Q ss_pred EEEeCCCCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCCcc----c-ccccc----CCcEEEECCccccccCCCceE
Q 009604 290 FFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN----Q-KALSL----GADLVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 290 V~lesP~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~~~----~-~~l~~----gaDivv~S~sK~lgg~g~v~g 357 (531)
|++++|+||||.+++. ++|.++|+++|++||+||+|..... . ..... +..+++.|+||.++.+|. ..
T Consensus 169 v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl-R~ 247 (405)
T PRK09148 169 LIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW-RM 247 (405)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch-he
Confidence 9999999999999986 5788889999999999999864321 1 11111 234678999999987764 47
Q ss_pred EEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCch
Q 009604 358 GSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 433 (531)
Q Consensus 358 G~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~ 433 (531)
|++++++++++.+...........+......+...++ .+....+...++...+.+.|+++. + .+..|.
T Consensus 248 G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~-~~~~p~------ 319 (405)
T PRK09148 248 GFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAG-W-DIPPPA------ 319 (405)
T ss_pred eeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcC-C-ccCCCC------
Confidence 8889999999988876654333333333222222332 233334445566777788887652 2 111121
Q ss_pred hhhhhhhcCCcccEEEEEEcCCH--HHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEE
Q 009604 434 HHIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRF 510 (531)
Q Consensus 434 ~~l~~~~~~g~g~ivsf~l~g~~--~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRl 510 (531)
.|..+++.++... ....+|.+.| +..++.+..|..+.. -.++++||
T Consensus 320 ----------~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~---------------------~~~~~~Ri 368 (405)
T PRK09148 320 ----------ASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGE---------------------HGDGYVRI 368 (405)
T ss_pred ----------eeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCeEEE
Confidence 3567888886421 1234555543 345666666644310 02478999
Q ss_pred EecCCCHHHHHHHHH
Q 009604 511 SFGVEDFEDLKADVL 525 (531)
Q Consensus 511 SvGlE~~edli~dL~ 525 (531)
+++ ++.+++.+.|.
T Consensus 369 ~~~-~~~~~l~~al~ 382 (405)
T PRK09148 369 ALV-ENEQRIRQAAR 382 (405)
T ss_pred Eec-CCHHHHHHHHH
Confidence 998 45555444443
No 148
>PRK09105 putative aminotransferase; Provisional
Probab=99.86 E-value=1.2e-19 Score=191.06 Aligned_cols=259 Identities=17% Similarity=0.216 Sum_probs=167.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCcE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tk 288 (531)
..+++++++++++++.+++.+++++||+|++++|.|..... .++..|+++..++. .|++++++. .+ +++
T Consensus 94 ~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~~-~~~ 167 (370)
T PRK09105 94 PADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWR----AADAQGAPVAKVPLRADGAHDVKAMLAA-DP-NAG 167 (370)
T ss_pred ChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEecCCCCCCCCHHHHHhc-CC-CCC
Confidence 35566666556699999999999999999999999987543 44556888777653 367888776 34 489
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHh--cCCEEEEeCCCCCCccc----cccccCCc-EEEECCccccccCCCceEEEEE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KALSLGAD-LVLHSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~--~gi~lIvD~a~a~~~~~----~~l~~gaD-ivv~S~sK~lgg~g~v~gG~iv 361 (531)
+|++++|+||||.+.+.++|.++++. +|++||+||+|...... .....+.+ +++.|+||.+|..|.+ .|+++
T Consensus 168 ~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlR-iG~~v 246 (370)
T PRK09105 168 LIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMR-LGLAA 246 (370)
T ss_pred EEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccc-eeeee
Confidence 99999999999999999888888754 48999999998532111 11112233 7888999999987754 68888
Q ss_pred eChHHHHHHHHHhhhcCCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhh
Q 009604 362 GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIAT 438 (531)
Q Consensus 362 ~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~ 438 (531)
+++++++.+... . ....+......+...+ +.+....++..++.+.+.+.|+++ ++. + +|.
T Consensus 247 ~~~~~i~~l~~~-~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~~~----------- 309 (370)
T PRK09105 247 ARPDLLAKLARF-G--HNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYK-C-TPS----------- 309 (370)
T ss_pred cCHHHHHHHHhc-C--CCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCC-c-CCC-----------
Confidence 999998888765 2 1223332222222223 333344455567777888888775 321 1 111
Q ss_pred hhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC-H
Q 009604 439 QQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED-F 517 (531)
Q Consensus 439 ~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~-~ 517 (531)
.|+++.+.++.+ ..+|.+.|...++.+ |..+ + ..++++||++|.++ .
T Consensus 310 -----~~~f~~~~~~~~---~~~l~~~L~~~gI~v--~~~~-----~-----------------~~~~~~Ris~~~~~~~ 357 (370)
T PRK09105 310 -----QANCFMVDVKRP---AKAVADAMAKQGVFI--GRSW-----P-----------------IWPNWVRVTVGSEEEM 357 (370)
T ss_pred -----CCcEEEEeCCCC---HHHHHHHHHHCCcEE--ecCC-----C-----------------CCCCeEEEEcCCHHHH
Confidence 255666666422 345566654435444 3111 0 02578999999643 3
Q ss_pred HHHHHHHHHHH
Q 009604 518 EDLKADVLQAL 528 (531)
Q Consensus 518 edli~dL~~AL 528 (531)
+.+++.|.+.+
T Consensus 358 ~~l~~al~~~~ 368 (370)
T PRK09105 358 AAFRSAFAKVM 368 (370)
T ss_pred HHHHHHHHHHh
Confidence 44555554443
No 149
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.86 E-value=2.7e-19 Score=190.39 Aligned_cols=200 Identities=15% Similarity=0.158 Sum_probs=139.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
++++++++++++|+..++.+++++||+|++++|+|......+. ..+..+..++. .|++++++++++ ++
T Consensus 93 ~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~-~~ 167 (402)
T PRK06107 93 DNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVL----ANDGTPVIVACPEEQGFKLTPEALEAAITP-RT 167 (402)
T ss_pred hhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHH----HcCCEEEEecCCcccCCCCCHHHHHhhcCc-Cc
Confidence 3455555555699999999999999999999998876543332 22333333332 357899999876 48
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhc-CCEEEEeCCCCCCcc-----cccccc-----CCcEEEECCccccccCC
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKK-GAIVCIDGTFATPLN-----QKALSL-----GADLVLHSATKFIGGHN 353 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~-gi~lIvD~a~a~~~~-----~~~l~~-----gaDivv~S~sK~lgg~g 353 (531)
++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|..... ...... +..+++.|+||.++.+|
T Consensus 168 ~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG 247 (402)
T PRK06107 168 RWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTG 247 (402)
T ss_pred eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcc
Confidence 99999999999999986 56778888998 999999999863211 011111 23588999999998666
Q ss_pred CceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCc
Q 009604 354 DVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 354 ~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v 420 (531)
. ..|++++++++++.+.......+...+....+++...++ .+....+...++++.+.+.|++++++
T Consensus 248 l-RiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~ 317 (402)
T PRK06107 248 W-RIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGL 317 (402)
T ss_pred c-ceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4 478999999999988877665554555554444444332 33344445566777788888876543
No 150
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.86 E-value=1.2e-19 Score=190.05 Aligned_cols=263 Identities=17% Similarity=0.164 Sum_probs=169.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CH-HHHHHhccCCCcE
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DM-EGLEAALNNNNVS 288 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~-e~Le~al~~~~tk 288 (531)
++++++++++++++..++.++ .+|| +++..|.|.... ..++..|+++..++.. ++ +++++.+++ ++|
T Consensus 72 ~~~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~-~~k 144 (356)
T PRK08056 72 ASWILAGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYR----RALQQVGCEIRRYSLREADGWQLTDAILEALTP-DLD 144 (356)
T ss_pred hhhEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHH----HHHHHcCCeEEEEecccccCCCccHHHHHhccC-CCC
Confidence 345554444459999888876 6786 566678876543 3445668887776532 22 356666765 599
Q ss_pred EEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----ccc-ccCCcEEEECCccccccCCCceEEE
Q 009604 289 LFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL-SLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 289 lV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l-~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+|++++|+||||.+.+ +++|+++|+++|++||+|++|...... ..+ ....++++.|+||+++..|.+ .|+
T Consensus 145 ~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~ 223 (356)
T PRK08056 145 CLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLR-LGY 223 (356)
T ss_pred EEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchh-hee
Confidence 9999999999999998 778899999999999999998654321 111 234568999999999977765 567
Q ss_pred EEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhh
Q 009604 360 ISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHH 435 (531)
Q Consensus 360 iv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~ 435 (531)
+++ ++++++.++..... ...+....+.+...+ ..+....++..++++.+.+.|++.+++. + +|.
T Consensus 224 ~v~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~-------- 291 (356)
T PRK08056 224 LVNSDDAAVARMRRQQMP--WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLT-V-WPG-------- 291 (356)
T ss_pred eecCCHHHHHHHHHhCCC--CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-cCC--------
Confidence 776 56777777654322 223333333333233 2222333455677778888888766542 2 221
Q ss_pred hhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC-
Q 009604 436 IATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV- 514 (531)
Q Consensus 436 l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl- 514 (531)
.|+.+++.++.+ ...|.+.|...++.+..|..+. +..+++|||++|-
T Consensus 292 --------~~~~~~~~~~~~---~~~~~~~l~~~gI~v~~~~~f~---------------------~~~~~~iRis~~~~ 339 (356)
T PRK08056 292 --------RANYLFLRCERP---DIDLQRALLTQRILIRSCANYP---------------------GLDSRYYRVAIRSA 339 (356)
T ss_pred --------CCcEEEEEcCCC---hHHHHHHHHHCCeEEEECCCCC---------------------CCCCCEEEEEEcCH
Confidence 256778877532 2456666655566666553321 1235789999997
Q ss_pred CCHHHHHHHHHHHHH
Q 009604 515 EDFEDLKADVLQALH 529 (531)
Q Consensus 515 E~~edli~dL~~AL~ 529 (531)
++.+.+++.|.+.++
T Consensus 340 ~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 340 AENERLLAALRNVLT 354 (356)
T ss_pred HHHHHHHHHHHHHHc
Confidence 556677777776553
No 151
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=1.2e-19 Score=189.07 Aligned_cols=260 Identities=16% Similarity=0.145 Sum_probs=169.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCcEE
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNVSL 289 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tkl 289 (531)
++++++++++++++.+++.+++++||+|+++.|.|.... ..++..|+++..++. .|++++++ ++++
T Consensus 77 ~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~-----~~~~ 147 (353)
T PRK05387 77 PEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYP----VYAGLYGIPYEEIPLDDDFSIDVEDYLR-----PNGG 147 (353)
T ss_pred HHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHH----HHHHHcCCEEEEeecCCCCCCCHHHHHh-----cCCE
Confidence 455665555669999999999999999999999995533 234455777776653 25666652 2678
Q ss_pred EEEeCCCCCCCcccCHHHHHHHHHhc-CCEEEEeCCCCCCccccc---c-ccCCcEEEECCccccccCCCceEEEEEeCh
Q 009604 290 FFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKA---L-SLGADLVLHSATKFIGGHNDVLAGSISGSG 364 (531)
Q Consensus 290 V~lesP~NPtG~v~dl~~I~~la~~~-gi~lIvD~a~a~~~~~~~---l-~~gaDivv~S~sK~lgg~g~v~gG~iv~~~ 364 (531)
|++++|+||||.+.+.+++.++++.+ ++++|+||+|........ . .....+++.|+||.++..|. ..|++++++
T Consensus 148 v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~G~~~~~~ 226 (353)
T PRK05387 148 IIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGL-RVGFAIGHP 226 (353)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhh-hceeeecCH
Confidence 99999999999999999999999875 999999999854321111 1 12346999999999986654 378888999
Q ss_pred HHHHHHHHHhhhcC-CCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhh
Q 009604 365 KLVTQIRNLHHVLG-GALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQ 440 (531)
Q Consensus 365 ~li~~l~~~~~~~G-~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~ 440 (531)
++++.++......+ .+.+....+.+...+ +.+....++..++++.+.+.|+++ ++. + +|.
T Consensus 227 ~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~------------- 290 (353)
T PRK05387 227 ELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFE-V-LPS------------- 290 (353)
T ss_pred HHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCC-------------
Confidence 99888877654332 233444333333333 233444555667778888888876 332 2 232
Q ss_pred cCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-CHHH
Q 009604 441 MTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-DFED 519 (531)
Q Consensus 441 ~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE-~~ed 519 (531)
.++++++.+++ ....+|.+.|...++.+..- ..+ + .++.+|||++.+ +.+.
T Consensus 291 ---~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~~------~~~----------------~-~~~~iRis~~~~~~~~~ 342 (353)
T PRK05387 291 ---KANFVFARHPS--HDAAELAAKLRERGIIVRHF------NKP----------------R-IDQFLRITIGTDEEMEA 342 (353)
T ss_pred ---cCcEEEEECCC--CCHHHHHHHHHHCCEEEEEC------CCC----------------C-CCCeEEEEeCCHHHHHH
Confidence 25677887764 23456666665445444210 000 0 247899999853 2344
Q ss_pred HHHHHHHHH
Q 009604 520 LKADVLQAL 528 (531)
Q Consensus 520 li~dL~~AL 528 (531)
+++.|.+++
T Consensus 343 ~~~~L~~~~ 351 (353)
T PRK05387 343 LVDALKEIL 351 (353)
T ss_pred HHHHHHHHh
Confidence 555555544
No 152
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.85 E-value=9.3e-20 Score=188.88 Aligned_cols=253 Identities=18% Similarity=0.198 Sum_probs=171.6
Q ss_pred cEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCC
Q 009604 217 STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 295 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP 295 (531)
+.|++++|+ +++..++. ++.+| .|+++.|+|.... ..++..|+++..++ |++++++.++ ++++|++++|
T Consensus 65 ~~i~~t~G~~~~i~~~~~-~l~~g-~vl~~~p~y~~~~----~~~~~~g~~~~~~~--d~~~l~~~~~--~~~~v~i~~p 134 (330)
T TIGR01140 65 ASVLPVNGAQEAIYLLPR-LLAPG-RVLVLAPTYSEYA----RAWRAAGHEVVELP--DLDRLPAALE--ELDVLVLCNP 134 (330)
T ss_pred hhEEECCCHHHHHHHHHH-HhCCC-eEEEeCCCcHHHH----HHHHHcCCEEEEeC--CHHHHHhhcc--cCCEEEEeCC
Confidence 455566666 77777654 46778 6888999997754 34556789988887 8999999984 3789999999
Q ss_pred CCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-ccc----ccCCcEEEECCccccccCCCceEEEEEeChHHH
Q 009604 296 TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-KAL----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLV 367 (531)
Q Consensus 296 ~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-~~l----~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li 367 (531)
+||||.+++ +++|+++|+++|++||+|++|...... ... ..+.++++.|+||.++.+|. ..|+++++++++
T Consensus 135 ~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-R~G~i~~~~~~~ 213 (330)
T TIGR01140 135 NNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGL-RLGFVVAHPALL 213 (330)
T ss_pred CCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchh-hhhheeCCHHHH
Confidence 999999999 566778889999999999998654332 111 12456999999999986663 468999999888
Q ss_pred HHHHHHhhhcCCCchHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCc
Q 009604 368 TQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGF 444 (531)
Q Consensus 368 ~~l~~~~~~~G~~~s~~~a~l~l~~L~t---l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~ 444 (531)
+.+......+ ..+......+...++. .....++..++.+.+.+.|++++.+. + .|+ .
T Consensus 214 ~~l~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~----------------~ 273 (330)
T TIGR01140 214 ARLREALGPW--TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLE-V-VGG----------------T 273 (330)
T ss_pred HHHHhcCCCC--CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCC----------------C
Confidence 8887654333 2334444333333332 23334555677788888888876442 1 222 3
Q ss_pred ccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009604 445 GGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 524 (531)
Q Consensus 445 g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL 524 (531)
|.++++.++. ...|.+.|...++.+..|..+. +...+.|||+++..+ + . +.|
T Consensus 274 ~~f~~~~~~~----~~~l~~~l~~~gi~v~pg~~f~---------------------~~~~~~iRi~~~~~~-~-~-~~~ 325 (330)
T TIGR01140 274 ALFLLVRTPD----AAALHEALARRGILIRDFDNFP---------------------GLDPRYLRFALPTDE-E-N-DRL 325 (330)
T ss_pred CeEEEEEcCC----HHHHHHHHHHCCEEEEECCCCC---------------------CCCCCEEEEEecCHH-H-H-HHH
Confidence 5678888753 2356666655566666654321 123468999999754 2 2 666
Q ss_pred HHHH
Q 009604 525 LQAL 528 (531)
Q Consensus 525 ~~AL 528 (531)
.++|
T Consensus 326 ~~~l 329 (330)
T TIGR01140 326 EEAL 329 (330)
T ss_pred HHhh
Confidence 6665
No 153
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=1.2e-19 Score=188.69 Aligned_cols=236 Identities=20% Similarity=0.231 Sum_probs=177.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC------CHHHHHHhccCCC
Q 009604 214 GAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA------DMEGLEAALNNNN 286 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~al-l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~------d~e~Le~al~~~~ 286 (531)
|.++++.++||+.|+.++|+++ ++|||+||++..+|..|.+.+ -..|.++.++|.+ |++.||++|+++
T Consensus 48 G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i----~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~- 122 (374)
T COG0399 48 GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAV----LLVGAKPVFVDIDPDTLNIDPDLIEAAITPR- 122 (374)
T ss_pred CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHH----HHcCCeEEEEecCCcccCCCHHHHHHHcccC-
Confidence 8999999999999999999966 699999999999999887544 3458999999864 899999999985
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccC--CcEEEECC--ccccccCCCceEEEEEe
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--TKFIGGHNDVLAGSISG 362 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g--aDivv~S~--sK~lgg~g~v~gG~iv~ 362 (531)
||+|+ |.+-.|..+|+++|.++|++||++||+|.+++.+...+-...| .|+.++|| +|.+.... ||++++
T Consensus 123 tKAIi---pVhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgE---GGav~t 196 (374)
T COG0399 123 TKAII---PVHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGE---GGAVVT 196 (374)
T ss_pred CeEEE---EehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCCccccC---ceEEEe
Confidence 99999 4677899999999999999999999999997766443332333 68999996 69888653 799888
Q ss_pred Ch-HHHHHHHHHhh----------------hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 363 SG-KLVTQIRNLHH----------------VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 363 ~~-~li~~l~~~~~----------------~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
++ ++.++++.++. .+...++...|.+.+..|+.+++.+++..++++.+.+.|++.+.+. .
T Consensus 197 nd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~---~ 273 (374)
T COG0399 197 NDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGIT---L 273 (374)
T ss_pred CCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc---c
Confidence 65 66777665432 1123456778888899999999999999999999999999887532 2
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcc
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 472 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~ia 472 (531)
|..+....| .-.+..+.++.....-+.+++.|+..++.
T Consensus 274 p~~~~~~~~---------~~~~~~i~~~~~~~~R~~l~~~L~~~gi~ 311 (374)
T COG0399 274 PPEPDGAVH---------AWHLYTILVDEEGISRDALMESLKEAGVG 311 (374)
T ss_pred cCCCCCcee---------eeeeeEEEecCCCCCHHHHHHHHHhCCCC
Confidence 221111111 11245555553213445677777766555
No 154
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.85 E-value=4.4e-19 Score=185.59 Aligned_cols=270 Identities=21% Similarity=0.228 Sum_probs=204.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCC-----CcE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNN-----NVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~-----~tk 288 (531)
|.|.+++|+||..|+..++.+++++||.|+.+...|.+.... ++..+.++..+..+|+++||+.+++. +.+
T Consensus 98 g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG----~rls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~ 173 (388)
T COG0156 98 GAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDG----IRLSRAEVRRFKHNDLDHLEALLEEARENGARRK 173 (388)
T ss_pred CCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHH----HHhCCCcEEEecCCCHHHHHHHHHhhhccCCCce
Confidence 999999999999999999999999999999999999886543 44456778888899999999999762 258
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc-------cc---ccCCcEEEECCccccccCCCceEE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------AL---SLGADLVLHSATKFIGGHNDVLAG 358 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-------~l---~~gaDivv~S~sK~lgg~g~v~gG 358 (531)
+|++|...++.|.+.||++|++++++||++|+|||+++.++... .. ....||++.|++|.+|.. ||
T Consensus 174 ~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~----Gg 249 (388)
T COG0156 174 LIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSS----GG 249 (388)
T ss_pred EEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhccc----Cc
Confidence 99999999999999999999999999999999999998765431 11 122489999999999954 79
Q ss_pred EEEeChHHHHHHHHHh--hhcCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCch
Q 009604 359 SISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 433 (531)
Q Consensus 359 ~iv~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~L~tl---~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~ 433 (531)
++.++..+++.++... ..+.+.++|..+..+...++.+ ..+.++.+++...+...+.... ++..++
T Consensus 250 ~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~------~~~~~s--- 320 (388)
T COG0156 250 YIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALG------LVLLPS--- 320 (388)
T ss_pred eeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC------CccCCC---
Confidence 9999999999887643 3567778887765555555544 4666667677766664444321 211111
Q ss_pred hhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009604 434 HHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 513 (531)
Q Consensus 434 ~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG 513 (531)
...++.+.+ ++...+.++.+.|...++.++ .+.+|... -....||+++.
T Consensus 321 ----------~s~I~pv~~-gd~~~a~~~s~~l~~~Gi~v~------~i~~PTVp--------------~gtarlRi~lt 369 (388)
T COG0156 321 ----------ESPIIPVIL-GDEERALEASRALLEEGIYVS------AIRPPTVP--------------KGTARLRITLT 369 (388)
T ss_pred ----------CCCeeeeEe-CCHHHHHHHHHHHHHCCeeEe------eecCCCCC--------------CCcceEEEEec
Confidence 346888888 455667777777754454443 23445322 12357999999
Q ss_pred CCCHHHHHHHHHHHHHhC
Q 009604 514 VEDFEDLKADVLQALHAI 531 (531)
Q Consensus 514 lE~~edli~dL~~AL~~i 531 (531)
..++++.|+.|.++|.++
T Consensus 370 a~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 370 AAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCHHHHHHHHHHHHhh
Confidence 999999999999999753
No 155
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.85 E-value=2.7e-19 Score=188.75 Aligned_cols=292 Identities=15% Similarity=0.129 Sum_probs=195.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC------CHHHHHHhccCCC
Q 009604 214 GAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA------DMEGLEAALNNNN 286 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~al-l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~------d~e~Le~al~~~~ 286 (531)
|.+++++++||++|+.+++.++ ++|||+||++.++|.++...+ ...|+++.++|.+ |++++++++++ +
T Consensus 45 g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~----~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~ 119 (376)
T TIGR02379 45 GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTMNIDETLIESAITH-R 119 (376)
T ss_pred CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcCCCCHHHHHHhcCc-C
Confidence 6788999999999999999887 899999999999998876443 3458888888743 68899999987 4
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc--cccccccCCcEEEECCc--cccccCCCceEEEEEe
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVLHSAT--KFIGGHNDVLAGSISG 362 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~--~~~~l~~gaDivv~S~s--K~lgg~g~v~gG~iv~ 362 (531)
||+|+ |+||+|...|+++|.++|+++|++||+|++++.+. ...+...-.|+.++|++ |.+...+ .||+++.
T Consensus 120 tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K~l~~g~--~gG~v~~ 194 (376)
T TIGR02379 120 TKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETKNYTSGG--EGGALLI 194 (376)
T ss_pred ceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCCcCcccC--CceEEEE
Confidence 99986 68899999999999999999999999999987653 22233323488888875 5454321 1677665
Q ss_pred C-hHHHHHHHHHhhh-------------------cC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 009604 363 S-GKLVTQIRNLHHV-------------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 363 ~-~~li~~l~~~~~~-------------------~G--~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v 420 (531)
+ +++.++++.++.. .| ..++...|.+++..|+.++...+++.++++.+.+.|.+.+..
T Consensus 195 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~ 274 (376)
T TIGR02379 195 NDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEK 274 (376)
T ss_pred CCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcC
Confidence 4 7788887765431 11 234556777888889999999999999999999998776421
Q ss_pred eEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccc----cCCCHH
Q 009604 421 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY----WDLSQS 496 (531)
Q Consensus 421 ~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~----~~~~~~ 496 (531)
..+..|..+....+ .-.++.+.++.. ...+++++.|+..++.+..+. ..+..+|....+ ...+..
T Consensus 275 ~~~~~~~~~~~~~~---------~~~~~~i~~~~~-~~r~~l~~~L~~~gI~~~~~~-~p~~~~~~~~~~~~~~~~~p~~ 343 (376)
T TIGR02379 275 GIIELPSIPNGCQH---------NAHMFYIKLKDE-DDRNELIKYLKEQEIMAVFHY-VPLHSSPAGRYFGRFHGEDIYT 343 (376)
T ss_pred CeeeCCCCCCCCee---------eeEEEEEEECCc-CCHHHHHHHHHHCCCCccccC-cCCCcchhHHhhCCCCCCChHH
Confidence 11223332211111 113456666532 235677888877777766442 233333321111 112222
Q ss_pred HHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 497 ERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 497 ~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
++ +....|.|=+...-+++.++.+.+++.+
T Consensus 344 ~~----~~~~~l~LP~~~~l~~~~~~~i~~~i~~ 373 (376)
T TIGR02379 344 TK----ESERLVRLPLYYGLSKEDQARVIQTICD 373 (376)
T ss_pred HH----HHhceEEccCCCCCCHHHHHHHHHHHHH
Confidence 21 2345677766655566777777777654
No 156
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.85 E-value=5.1e-19 Score=182.20 Aligned_cols=268 Identities=16% Similarity=0.164 Sum_probs=183.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CH--HHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DM--EGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~--e~Le~al~~~~t 287 (531)
.++++++++|++++..++.++.++||+|+++.+.|.+.... ++..|.++..++.. +. +.++..+++ ++
T Consensus 59 ~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~ 133 (350)
T cd00609 59 PEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAA----ARLAGAEVVPVPLDEEGGFLLDLELLEAAKTP-KT 133 (350)
T ss_pred cceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHCCCEEEEEecccccCCccCHHHHHhhcCc-cc
Confidence 56688888888999999999999999999999999986644 34457777766643 22 556666665 49
Q ss_pred EEEEEeCCCCCCCcccCHHHH---HHHHHhcCCEEEEeCCCCCCcc--------ccccccCCcEEEECCccccccCCCce
Q 009604 288 SLFFTESPTNPFLRCVDVKLV---SDLCHKKGAIVCIDGTFATPLN--------QKALSLGADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl~~I---~~la~~~gi~lIvD~a~a~~~~--------~~~l~~gaDivv~S~sK~lgg~g~v~ 356 (531)
++|++++|+||+|.+.|++++ .++|+++|+++|+|++++.+.. ......+.|+++.|++|+++..| ..
T Consensus 134 ~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g-~~ 212 (350)
T cd00609 134 KLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPG-LR 212 (350)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcc-cc
Confidence 999999999999999986655 4899999999999999865321 12334568999999999997333 34
Q ss_pred EEEEEeCh-HHHHHHHHHhhhcCCCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCC
Q 009604 357 AGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSH 431 (531)
Q Consensus 357 gG~iv~~~-~li~~l~~~~~~~G~~~s~~~a~l~l~~L~t----l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~ 431 (531)
.|++++++ ++.+.++......+...+......+...++. +....++..++++.+.+.|++++.... ..+
T Consensus 213 ~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~----- 286 (350)
T cd00609 213 IGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVV-VKP----- 286 (350)
T ss_pred eEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCC-----
Confidence 78888888 7888887765554344444443333333333 333345566778888888887654321 111
Q ss_pred chhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE
Q 009604 432 PEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS 511 (531)
Q Consensus 432 p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlS 511 (531)
..|.++++.+++. .....+.+.|+..++.+..++.+.. ..+..||++
T Consensus 287 -----------~~g~~~~~~~~~~-~~~~~~~~~l~~~gi~i~~~~~~~~---------------------~~~~~iRi~ 333 (350)
T cd00609 287 -----------SGGFFLWLDLPEG-DDEEFLERLLLEAGVVVRPGSAFGE---------------------GGEGFVRLS 333 (350)
T ss_pred -----------CccEEEEEecCCC-ChHHHHHHHHHhCCEEEeccccccc---------------------CCCCeEEEE
Confidence 1466788888653 2334455556555665554433210 125789999
Q ss_pred ecCCCHHHHHHHHHHHHH
Q 009604 512 FGVEDFEDLKADVLQALH 529 (531)
Q Consensus 512 vGlE~~edli~dL~~AL~ 529 (531)
++.. ++.++.+.++|+
T Consensus 334 ~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 334 FATP--EEELEEALERLA 349 (350)
T ss_pred eeCC--HHHHHHHHHHhh
Confidence 9998 666677777764
No 157
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.85 E-value=4.2e-19 Score=187.56 Aligned_cols=289 Identities=18% Similarity=0.184 Sum_probs=195.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHHHHhccCCC
Q 009604 214 GAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGLEAALNNNN 286 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~al-l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~~~~ 286 (531)
|.+++++++||++|+.+++.++ +++||+||++.++|.++...+ ...|+++.++|. .|++++++++++ +
T Consensus 47 g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~----~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~ 121 (379)
T PRK11658 47 GNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMI----VLLGATPVMVDVDRDTLMVTPEAIEAAITP-R 121 (379)
T ss_pred CCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHH----HHcCCEEEEEecCCCcCCcCHHHHHHhccc-C
Confidence 7788999999999999999999 899999999999998876443 346888888864 378999999987 4
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc---ccccCCcEEEECCccccccCCCceEEEEEeC
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---ALSLGADLVLHSATKFIGGHNDVLAGSISGS 363 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~---~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~ 363 (531)
||+|+ |+|++|.+.|+++|.++|+++|++||+|++++.+.... ....|.++..++.+|.+.+. .||+++++
T Consensus 122 tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g---~GG~v~~~ 195 (379)
T PRK11658 122 TKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCA---EGGLVVTD 195 (379)
T ss_pred CeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCCcCccc---CceEEEEC
Confidence 99987 67789999999999999999999999999987654322 23356666666667887654 27888875
Q ss_pred -hHHHHHHHHHhhh----------------------cC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 009604 364 -GKLVTQIRNLHHV----------------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHP 418 (531)
Q Consensus 364 -~~li~~l~~~~~~----------------------~G--~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p 418 (531)
+++.++++..+.. .| ..++.+.+.+.+..++.++...+++.++++.+.+.|++.+
T Consensus 196 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~ 275 (379)
T PRK11658 196 DDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLP 275 (379)
T ss_pred CHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6777777653310 11 2345667788888889999989999999999999998765
Q ss_pred CceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC--HHHHHHHHHHcCCCCcccccCCcccccccCccc---cccCC
Q 009604 419 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--LTATIKFIDALKIPYIAPSFGGCESIVDQPAIM---SYWDL 493 (531)
Q Consensus 419 ~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~--~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~---s~~~~ 493 (531)
.+ .+..|..... ....++.|.++.. ....+++++.|+..++.+.... ..+..+|... ....+
T Consensus 276 ~~-~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~-~~~~~~~~~~~~~~~~~~ 342 (379)
T PRK11658 276 FQ-PLSLPAWPHQ-----------HAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHF-RAAHTQKYYRERFPTLSL 342 (379)
T ss_pred Cc-cCcCCCCCCc-----------eeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccC-cCcccChhhhccCCCCCC
Confidence 32 2222221100 0113555666421 1235677777876666544332 1222233211 01122
Q ss_pred CHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 494 SQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 494 ~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+..++ +....|-|-+...-+++.++.+.+++++
T Consensus 343 p~~~~----~~~~~l~lP~~~~l~~~~~~~i~~~i~~ 375 (379)
T PRK11658 343 PNTEW----NSERICSLPLFPDMTDADVDRVITALQQ 375 (379)
T ss_pred hHHHH----HHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 22222 2345677766665566667777776654
No 158
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.85 E-value=5.3e-20 Score=193.32 Aligned_cols=290 Identities=20% Similarity=0.218 Sum_probs=199.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC------CHHHHHHhccCCC
Q 009604 214 GAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA------DMEGLEAALNNNN 286 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~al-l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~------d~e~Le~al~~~~ 286 (531)
|.++++.++||+.|+.+++.++ +++||+|+++..++.++...+ ...|.+++++|.+ |+++++++++++
T Consensus 39 g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai----~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~- 113 (363)
T PF01041_consen 39 GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAI----LWAGAEPVFVDIDPETLNIDPEALEKAITPK- 113 (363)
T ss_dssp TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHH----HHTT-EEEEE-BETTTSSB-HHHHHHHHHTT-
T ss_pred CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHH----HHhccEEEEEeccCCcCCcCHHHHHHHhccC-
Confidence 8899999999999999999998 689999999999998876544 3458999999853 899999999985
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc--cccccCCcEEEECC--ccccccCCCceEEEEEe
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSA--TKFIGGHNDVLAGSISG 362 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~--~~l~~gaDivv~S~--sK~lgg~g~v~gG~iv~ 362 (531)
||+|++ .+..|...|+++|.++|+++|++||.|.+++.+... +....-.|+.++|| +|.+.... ||+++.
T Consensus 114 t~ai~~---~h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K~i~~ge---GG~v~~ 187 (363)
T PF01041_consen 114 TKAILV---VHLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTKIITTGE---GGAVVT 187 (363)
T ss_dssp EEEEEE---E-GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTSSS-SSS----EEEEE
T ss_pred ccEEEE---ecCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCCCCCcCCC---CeeEEe
Confidence 999986 667799999999999999999999999998765433 33333369999998 59986544 788888
Q ss_pred C-hHHHHHHHHHhh-----------------hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEe
Q 009604 363 S-GKLVTQIRNLHH-----------------VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVH 424 (531)
Q Consensus 363 ~-~~li~~l~~~~~-----------------~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~ 424 (531)
+ +++.++++.++. .+...++++.|.+++..|+.++.++++..+++..+.+.|.+.+.+....
T Consensus 188 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~ 267 (363)
T PF01041_consen 188 NDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPP 267 (363)
T ss_dssp STHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEG
T ss_pred cHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCccccc
Confidence 6 466777765442 1123577889999999999999999999999999999999988876554
Q ss_pred CCCCCCCchhhhhhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCCcccccCCcccccccCcccccc-----CCCHHHH
Q 009604 425 YPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW-----DLSQSER 498 (531)
Q Consensus 425 ~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~-~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~-----~~~~~~~ 498 (531)
.+..... + ....+.+.+++.. ...+.+++.|+..++.+.......+..+|....+. .++..+.
T Consensus 268 ~~~~~~~--~---------~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~ 336 (363)
T PF01041_consen 268 IPDGAER--S---------SYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAER 336 (363)
T ss_dssp CGTTTEE--B---------CESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHH
T ss_pred ccccccc--c---------ccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHH
Confidence 4332110 0 1224566666421 13567788887777777766533333334322111 1222221
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 499 LKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 499 ~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
+.+..|-|-+...-+++.++.+.++|.
T Consensus 337 ----l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 337 ----LSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp ----HHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred ----HHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 234678888877777888888887763
No 159
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.85 E-value=4.9e-19 Score=186.59 Aligned_cols=268 Identities=16% Similarity=0.125 Sum_probs=179.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCC---CcEEE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNN---NVSLF 290 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~---~tklV 290 (531)
+.+..+++++|++++..++.+++++||+|+++.+.|......+ ...|+++..++..|++++++.+++. ++++|
T Consensus 92 g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~----~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v 167 (385)
T TIGR01825 92 KTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGL----RLTKATKKIYKHADMDDLDRVLRENPSYGKKLI 167 (385)
T ss_pred CCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHH----HhcCCceEEeCCCCHHHHHHHHHhhccCCCeEE
Confidence 6677899999999999999999999999999999998765333 2346777777777888888877532 48999
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc---------cccccCCcEEEECCccccccCCCceEEEEE
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~---------~~l~~gaDivv~S~sK~lgg~g~v~gG~iv 361 (531)
+++++.||+|.+.|+++|.++|++||+++|+|++|+.+... -....+.|+++.|+||++++. +|+++
T Consensus 168 ~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----gG~~~ 243 (385)
T TIGR01825 168 VTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVV----GGYAA 243 (385)
T ss_pred EEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcC----CCEEe
Confidence 99999999999999999999999999999999998654221 012246789999999999764 48888
Q ss_pred eChHHHHHHHHHhh--hcCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhh
Q 009604 362 GSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHI 436 (531)
Q Consensus 362 ~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~L~tl---~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l 436 (531)
+++++++.+..... ..+....+...+.+..+++.+ ....++..++.+.+.+.|++. ++. +..|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~---------- 311 (385)
T TIGR01825 244 GHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL-GYD-TGGS---------- 311 (385)
T ss_pred cCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC-CCCC----------
Confidence 89888888765432 223333444333334444433 223455556677777778753 221 1101
Q ss_pred hhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC
Q 009604 437 ATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED 516 (531)
Q Consensus 437 ~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~ 516 (531)
.++++.+.++. ......|.+.|...++.+..++. |.. ....+.||+++.+..
T Consensus 312 -------~~~~~~~~~~~-~~~~~~~~~~L~~~gi~v~~~~~------~~~--------------~~~~~~iRi~~~~~~ 363 (385)
T TIGR01825 312 -------ETPITPVVIGD-EKAAQEFSRRLFDEGIFAQSIVF------PTV--------------PRGTARIRNIPTAEH 363 (385)
T ss_pred -------CCCEEEEEECC-HHHHHHHHHHHHHCCcEEcccCC------CCC--------------CCCCceEEEEEcCCC
Confidence 13466666642 23456677776444655542211 100 012468999987766
Q ss_pred HHHHHHHHHHHHH
Q 009604 517 FEDLKADVLQALH 529 (531)
Q Consensus 517 ~edli~dL~~AL~ 529 (531)
+++.++.+.++|+
T Consensus 364 ~~e~i~~~~~~l~ 376 (385)
T TIGR01825 364 TKDDLDQALDAYE 376 (385)
T ss_pred CHHHHHHHHHHHH
Confidence 6665555555554
No 160
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=1.5e-19 Score=190.31 Aligned_cols=259 Identities=18% Similarity=0.232 Sum_probs=170.8
Q ss_pred cEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCcEEE
Q 009604 217 STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tklV 290 (531)
+.|++++|+ +++..++.+++++||+|+++.|+|.... ..++..|+++..++. .|+++++++++++ +++|
T Consensus 89 ~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~-~~~v 163 (371)
T PRK05166 89 DRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHE----DYPTMMGARVERVTVTPDLGFDLDALCAAVARA-PRML 163 (371)
T ss_pred HHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcC-CCEE
Confidence 345555555 9999999999999999999999997644 334556888877754 2689999998774 8999
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHh--cCCEEEEeCCCCCCccc----cc---c-ccC-CcEEEECCccccccCCCceEEE
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KA---L-SLG-ADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~--~gi~lIvD~a~a~~~~~----~~---l-~~g-aDivv~S~sK~lgg~g~v~gG~ 359 (531)
++++|+||||.+++.+++.++++. .++++|+|++|...... .. + ..+ ..+++.|+||.++-.|.+ .|+
T Consensus 164 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlR-iG~ 242 (371)
T PRK05166 164 MFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLR-VGY 242 (371)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhh-eee
Confidence 999999999999998877777654 47899999997643311 11 1 111 248899999999866654 567
Q ss_pred EE-eChHHHHHHHHHhhhcCCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhh
Q 009604 360 IS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHH 435 (531)
Q Consensus 360 iv-~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~ 435 (531)
++ .++++++.++.....++ .+......+...+ +.+....+...++.+.+.+.|+++ ++. + +|.
T Consensus 243 ~i~~~~~l~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~p~-------- 309 (371)
T PRK05166 243 GLVSDPELVGLLDRVRTPFN--VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYR-I-APS-------- 309 (371)
T ss_pred eecCCHHHHHHHHHhccCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCe-e-CCC--------
Confidence 55 57788887766544333 3333322222222 334444455566777788888876 332 2 222
Q ss_pred hhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009604 436 IATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 515 (531)
Q Consensus 436 l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE 515 (531)
.|+++++.++.+ ..+|.+.|...++.+..|.. + + .+++|||+++..
T Consensus 310 --------~g~fl~~~~~~~---~~~l~~~l~~~gi~v~p~~~------~----------------~-~~~~iRi~~~~~ 355 (371)
T PRK05166 310 --------RANFLFFDARRP---ASAVAEALLRQGVIVKPWKQ------P----------------G-FETFIRVSIGSP 355 (371)
T ss_pred --------cCCEEEEeCCCC---HHHHHHHHHHCCeEEecCCC------C----------------C-CCCeEEEEcCCH
Confidence 356778876432 34566666545666555421 0 1 157899999975
Q ss_pred C-HHHHHHHHHHHH
Q 009604 516 D-FEDLKADVLQAL 528 (531)
Q Consensus 516 ~-~edli~dL~~AL 528 (531)
+ .+++++.|+..+
T Consensus 356 ~~~~~l~~~l~~i~ 369 (371)
T PRK05166 356 EENDHFVAALDKVL 369 (371)
T ss_pred HHHHHHHHHHHHHh
Confidence 4 566666665543
No 161
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.85 E-value=4.3e-19 Score=188.91 Aligned_cols=269 Identities=19% Similarity=0.176 Sum_probs=183.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC---CCcE
Q 009604 214 GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN---NNVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~--pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~---~~tk 288 (531)
|.+++++++||++|+..++..+.. +++.|+.....|.+....+ +..++++..++..|+++|++.++. .+++
T Consensus 105 g~~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~----~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 180 (407)
T PRK09064 105 GKEAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGI----RRSRCEKHIFRHNDVAHLEELLAAADPDRPK 180 (407)
T ss_pred CCCcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHH----HHcCCcEEEECCCCHHHHHHHHHhccCCCCe
Confidence 667899999999998888887654 7887777766666554332 334666666777788888888752 2489
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc-------c--ccccCCcEEEECCccccccCCCceEEE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------K--ALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~-------~--~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+|++++|+||+|.+.|+++|.++|+++|++||+||+|+.+... . .+....|+++.|++|.+|.. ||+
T Consensus 181 ~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~----GG~ 256 (407)
T PRK09064 181 LIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVM----GGY 256 (407)
T ss_pred EEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhcc----Cce
Confidence 9999999999999999999999999999999999998643211 0 01123589999999999865 488
Q ss_pred EEeChHHHHHHHHHhhh--cCCCchHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 360 ISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~L~tl~---~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
+++++++++.++..... +....++..+..++..++.+. ...++..++.+.+.+.|++. ++ +.++
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-----~~~~----- 325 (407)
T PRK09064 257 IAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA-GI-----PVMP----- 325 (407)
T ss_pred EecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CC-----CCCC-----
Confidence 88998888877654332 233455555555555665553 22455667788888888764 21 1111
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 513 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~-~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG 513 (531)
..++++.|.++. ......+.+.|. ..++.+... ..|.. + ...+.||||++
T Consensus 326 --------~~~~iv~i~~~~-~~~~~~l~~~L~~~~gi~v~~~------~~p~~------~--------~~~~~lRis~~ 376 (407)
T PRK09064 326 --------NESHIVPVMVGD-PEKCKKASDMLLEEHGIYVQPI------NYPTV------P--------RGTERLRITPT 376 (407)
T ss_pred --------CCCCEEEEEeCC-HHHHHHHHHHHHHhCCEEEeeE------CCCCC------C--------CCCceEEEEeC
Confidence 125678888753 244566776663 335544321 11110 0 01367999999
Q ss_pred CCCHHHHHHHHHHHHHh
Q 009604 514 VEDFEDLKADVLQALHA 530 (531)
Q Consensus 514 lE~~edli~dL~~AL~~ 530 (531)
+.++++.++.+.++|++
T Consensus 377 ~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 377 PFHTDEMIDHLVEALVE 393 (407)
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 98888888888777764
No 162
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.85 E-value=4.5e-19 Score=191.66 Aligned_cols=271 Identities=17% Similarity=0.168 Sum_probs=183.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----CCHHHHHHhccCCCcEE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNNNVSL 289 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~d~e~Le~al~~~~tkl 289 (531)
.+++++++++..+|+.+++..+++|||+|++.+|+|.+....+ +..|+++..++. .|+|+|++.++.+++|+
T Consensus 154 ~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~----~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~ 229 (459)
T COG1167 154 EPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQAL----EALGARVIPVPVDEDGIDPEALEEALAQWKPKA 229 (459)
T ss_pred CcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHH----HHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcE
Confidence 3454445444459999999999999999999999999987555 445666665543 48999999998766899
Q ss_pred EEEe-CCCCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCCccc-------cc-cccCCcEEEECCccccccCCCceE
Q 009604 290 FFTE-SPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-------KA-LSLGADLVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 290 V~le-sP~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~~~~-------~~-l~~gaDivv~S~sK~lgg~g~v~g 357 (531)
+|+. +-+||||.++++ ++|.++|++||+++|+|+.|+..... .. ...+-.+++.||||.+.+.- ..
T Consensus 230 ~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~Pgl--Rl 307 (459)
T COG1167 230 VYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGL--RL 307 (459)
T ss_pred EEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhccccc--ce
Confidence 9883 335999999986 48999999999999999998653221 11 12255699999999999753 57
Q ss_pred EEEEeChHHHHHHHHHhhhcCCCchHHHHHHHH----HH-HHHHHHHHHH-HHHHHHHHHHHHHcC-CCceEEeCCCCCC
Q 009604 358 GSISGSGKLVTQIRNLHHVLGGALNPNAAYLII----RG-MKTLHLRVQQ-QNSTALRMAKILEAH-PKVKRVHYPGLKS 430 (531)
Q Consensus 358 G~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l----~~-L~tl~~r~~~-~~~na~~La~~L~~~-p~v~~V~~pgl~s 430 (531)
||+++++++++.+...........+.+....+. .| .+..-.++++ ..+....+.+.|+++ +....+..|.
T Consensus 308 G~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~--- 384 (459)
T COG1167 308 GYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPE--- 384 (459)
T ss_pred eeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCC---
Confidence 999999999998887666555444443322111 22 2222233333 334556677788776 3343444442
Q ss_pred CchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCccccc-CCcccccccCccccccCCCHHHHHhcCCCCCeEE
Q 009604 431 HPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF-GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 509 (531)
Q Consensus 431 ~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~-Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIR 509 (531)
.|-+++++++.+ .+..+++......++.+.. |..+..- +-..+.+|
T Consensus 385 -------------gG~flwl~l~~~-~~~~~l~~~a~~~gv~i~~~g~~f~~~-------------------~~~~~~~R 431 (459)
T COG1167 385 -------------GGLFLWLELPEG-IDARELLAAALEKGVVVTPLGSAFSAD-------------------GDPRNGLR 431 (459)
T ss_pred -------------ceEEEEEEcCCC-CCHHHHHHHHHHCCCEEEcCCccccCC-------------------CCCCCeEE
Confidence 467899999865 3455666666555655555 5433210 00246899
Q ss_pred EEecCCCHHHHHHHHHH
Q 009604 510 FSFGVEDFEDLKADVLQ 526 (531)
Q Consensus 510 lSvGlE~~edli~dL~~ 526 (531)
|+++..+.+++.+.+..
T Consensus 432 l~~s~~~~e~i~~gi~~ 448 (459)
T COG1167 432 LSFSSPSEEEIEEGIKR 448 (459)
T ss_pred EEcCCCCHHHHHHHHHH
Confidence 99999887766655553
No 163
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.85 E-value=6.8e-19 Score=187.30 Aligned_cols=262 Identities=16% Similarity=0.127 Sum_probs=164.1
Q ss_pred CcEEEeCCh-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHH----HHHHhcc
Q 009604 216 ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADME----GLEAALN 283 (531)
Q Consensus 216 e~~i~~sSG-~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e----~Le~al~ 283 (531)
++.|++++| ++++.+++.+++++||.|++++|+|...... ++..|+++..++. .|++ .++++++
T Consensus 95 ~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 170 (403)
T PRK08636 95 ETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQA----FILAGGNVHKMPLEYNEDFELDEDQFFENLEKALR 170 (403)
T ss_pred CCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHhcCCEEEEEeccccccCccChhhhhhHHHHHHh
Confidence 433555555 5999999999999999999999999886533 3445777766532 2444 4566664
Q ss_pred C--CCcEEEEEeCCCCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCCccc----cc---ccc--CCcEEEECCcccc
Q 009604 284 N--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ----KA---LSL--GADLVLHSATKFI 349 (531)
Q Consensus 284 ~--~~tklV~lesP~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~~~~----~~---l~~--gaDivv~S~sK~l 349 (531)
+ .++++|++++|+||||.+++. ++|.++|++|+++||+|++|...... .+ ++. ...+++.|+||.+
T Consensus 171 ~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 250 (403)
T PRK08636 171 ESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSY 250 (403)
T ss_pred hccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEeccccc
Confidence 2 258999999999999999974 67888899999999999998643211 11 111 1235578999999
Q ss_pred ccCCCceEEEEEeChHHHHHHHHHhhhc--CC-CchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 350 GGHNDVLAGSISGSGKLVTQIRNLHHVL--GG-ALNPNAAYLIIRG-MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 350 gg~g~v~gG~iv~~~~li~~l~~~~~~~--G~-~~s~~~a~l~l~~-L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
+.+|. ..|++++++++++.+....... +. ......+..++.+ .+.+....+...++.+.+.+.|+++ ++ .+..
T Consensus 251 ~~~Gl-RiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~-~~~~ 327 (403)
T PRK08636 251 NMAGW-RVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA-GW-ELQK 327 (403)
T ss_pred CCccc-eeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CC-cccC
Confidence 76664 4788999999988887765432 22 1122222222221 1223333344456667777888764 22 1222
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCCH--HHHHHHHHH-cCCCCcccccCCcccccccCccccccCCCHHHHHhcC
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDA-LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 502 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~--~~~~~fl~~-L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~g 502 (531)
|. .|..+++.++... ....+|.+. ++..++.+..|..+. +
T Consensus 328 p~----------------~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~---------------------~ 370 (403)
T PRK08636 328 PR----------------ASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFG---------------------E 370 (403)
T ss_pred CC----------------cceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhC---------------------c
Confidence 21 4668888886421 123556554 444566666553321 0
Q ss_pred CCCCeEEEEecCCCHHHHHH
Q 009604 503 IMDNLVRFSFGVEDFEDLKA 522 (531)
Q Consensus 503 i~~~lIRlSvGlE~~edli~ 522 (531)
..++.+||+++. +.+++.+
T Consensus 371 ~~~~~iRi~~~~-~~~~l~~ 389 (403)
T PRK08636 371 YGDEYVRIALIE-NENRIRQ 389 (403)
T ss_pred CCCCeEEEEecC-CHHHHHH
Confidence 124789999994 4444333
No 164
>PLN02822 serine palmitoyltransferase
Probab=99.85 E-value=1.1e-18 Score=189.57 Aligned_cols=273 Identities=15% Similarity=0.126 Sum_probs=187.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC--------C
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN--------N 285 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~--------~ 285 (531)
+.++++++++|..++..++.+++++||.|+++...|..+... +...+.++.+++.+|.++++..+++ .
T Consensus 168 ~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~----~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~ 243 (481)
T PLN02822 168 GTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNG----LYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKK 243 (481)
T ss_pred CCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHH----HHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccC
Confidence 677899999998889999999999999999988777665432 3333667888888888777665531 1
Q ss_pred Cc-EEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc-------cccc---cCCcEEEECCccccccCCC
Q 009604 286 NV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALS---LGADLVLHSATKFIGGHND 354 (531)
Q Consensus 286 ~t-klV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~-------~~l~---~gaDivv~S~sK~lgg~g~ 354 (531)
++ ++|++|+++|++|.+.|+++|.++|++||++||+||+|+.+... .... ...|+++.|++|.++..
T Consensus 244 ~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~-- 321 (481)
T PLN02822 244 KLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATE-- 321 (481)
T ss_pred CCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhC--
Confidence 24 79999999999999999999999999999999999998744321 1111 14689999999999854
Q ss_pred ceEEEEEeChHHHHHHHHHh--hhcCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCC
Q 009604 355 VLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 429 (531)
Q Consensus 355 v~gG~iv~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~L~tl---~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~ 429 (531)
||++++++++++.++... ..+++.+++..+..++..++.+ ....++..++.+.+.+.|++.+++. +..|
T Consensus 322 --GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~--- 395 (481)
T PLN02822 322 --GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLS-IGSN--- 395 (481)
T ss_pred --CeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcc-cCCC---
Confidence 589999999988776432 2344444565555544455443 3456677788888888887654332 1111
Q ss_pred CCchhhhhhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcC-CCCcccccCCcccccccCccccccCCCHHHHHhc
Q 009604 430 SHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKY 501 (531)
Q Consensus 430 s~p~~~l~~~~~~g~g~ivsf~l~g~-------~~~~~~fl~~L~-~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~ 501 (531)
+.+.++.+.+++. ......|.+.|- ..++.++.+.. |. + . .
T Consensus 396 -------------~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~------~~---~---~------~ 444 (481)
T PLN02822 396 -------------TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKR------ST---L---D------K 444 (481)
T ss_pred -------------CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCC------CC---c---C------C
Confidence 1356788888531 123467777763 55666654422 10 0 0 0
Q ss_pred CCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 502 GIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 502 gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
+-.+..+|+++...++++.|+.+.++|+
T Consensus 445 ~~~~~~lRi~is~~~t~edI~~~~~~l~ 472 (481)
T PLN02822 445 CRLPVGIRLFVSAGHTESDILKASESLK 472 (481)
T ss_pred CCCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 0113469999988777777777666665
No 165
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=4.6e-19 Score=185.45 Aligned_cols=257 Identities=14% Similarity=0.123 Sum_probs=159.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCC
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNN 286 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~ 286 (531)
.++++++++++++++.+++.+++++||+|+++.|+|..... .....|..+..++. .+.+++++.+. +
T Consensus 81 ~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~----~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~--~ 154 (357)
T PRK14809 81 SPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGM----SARYHHGEVREYPVSKADDFEQTADTVLDAYD--G 154 (357)
T ss_pred CcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEEecccCcCCCcCHHHHHHhhc--C
Confidence 34455555445599999999999999999999999864332 22334555554432 14566666553 3
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhc--CCEEEEeCCCCCCccc-cc---cc-cCCcEEEECCccccccCCCceEEE
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-KA---LS-LGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~--gi~lIvD~a~a~~~~~-~~---l~-~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+|+|++++|+||||.+++.+++.++++.. +++||+||+|...... .. .. ...-+++.|+||.++..|. ..|+
T Consensus 155 ~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl-RiG~ 233 (357)
T PRK14809 155 ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGL-RLGY 233 (357)
T ss_pred CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcch-hhee
Confidence 79999999999999999988888877653 7899999998654221 11 11 1234788999999986664 4788
Q ss_pred EEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhh
Q 009604 360 ISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHI 436 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l 436 (531)
+++++++++.+......+ ..+......+...++ .+....+...++.+.+.+.|... .+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~---------- 295 (357)
T PRK14809 234 AVVPEEWADAYARVNTPF--AASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP------TWE---------- 295 (357)
T ss_pred eecCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc------cCC----------
Confidence 899999988887654322 234444444333332 22222333334444455555321 112
Q ss_pred hhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC-C
Q 009604 437 ATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV-E 515 (531)
Q Consensus 437 ~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl-E 515 (531)
..|+++++++.+ ..+|.+.|...++.+..|..+ | .+++|||+++- |
T Consensus 296 ------~~g~f~~~~~~~----~~~~~~~l~~~gv~v~~g~~f----------------------~-~~~~iRls~~~~~ 342 (357)
T PRK14809 296 ------SAGNFVLAEVGD----ASAVAEAAQERGVIVRDCTSF----------------------G-LPECIRITCGTRE 342 (357)
T ss_pred ------CCCCEEEEECCC----HHHHHHHHHHCCEEEEECccC----------------------C-CCCeEEEecCCHH
Confidence 136788888742 345666665556666666332 1 13689999984 2
Q ss_pred CHHHHHHHHHHHH
Q 009604 516 DFEDLKADVLQAL 528 (531)
Q Consensus 516 ~~edli~dL~~AL 528 (531)
+.++.++.|.+++
T Consensus 343 ~~~~~l~~L~~~l 355 (357)
T PRK14809 343 ETERAVEVLNEVL 355 (357)
T ss_pred HHHHHHHHHHHHh
Confidence 3344444444444
No 166
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.84 E-value=7.7e-19 Score=186.34 Aligned_cols=264 Identities=15% Similarity=0.156 Sum_probs=169.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHHHHhccCCCcE
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGLEAALNNNNVS 288 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~~~~tk 288 (531)
++++++++++++++..++.+++++||.|+++.++|..... .++..|+++.+++. .|++++++++++ +++
T Consensus 96 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~----~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~-~~~ 170 (394)
T PRK06836 96 ADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRF----YVDNHGGKLVVVPTDTDTFQPDLDALEAAITP-KTK 170 (394)
T ss_pred cCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCEEEEEecCCccCcCCHHHHHhhcCc-Cce
Confidence 4567777777799999999999999999999999988543 34556888887753 368999999987 499
Q ss_pred EEEEeCCCCCCCcccC---HHHHHHHHHh------cCCEEEEeCCCCCCccc----cc-c-ccCCcEEEECCccccccCC
Q 009604 289 LFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLNQ----KA-L-SLGADLVLHSATKFIGGHN 353 (531)
Q Consensus 289 lV~lesP~NPtG~v~d---l~~I~~la~~------~gi~lIvD~a~a~~~~~----~~-l-~~gaDivv~S~sK~lgg~g 353 (531)
+|++++|+||||.+++ +++|+++|++ ||+++|+|++|...... .. . .....+++.|+||.++.+|
T Consensus 171 ~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG 250 (394)
T PRK06836 171 AVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPG 250 (394)
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcc
Confidence 9999999999999987 5567777888 89999999998643211 00 1 1234689999999998666
Q ss_pred CceEEEEEeChHHHHH------HHHHhhhcC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 354 DVLAGSISGSGKLVTQ------IRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 354 ~v~gG~iv~~~~li~~------l~~~~~~~G-~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
.+ .|++++++++.+. +.......+ ...+......+.+.++.- .+.+...++...+.+.|+++ ++. +..|
T Consensus 251 lR-iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~r~~l~~~L~~~-g~~-~~~~ 326 (394)
T PRK06836 251 ER-IGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-VDVSIYKRNRDLLYDGLTEL-GFE-CVKP 326 (394)
T ss_pred ee-eEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHhC-CCE-eecC
Confidence 44 6788887665332 111112112 123333333333333321 22344556677778888775 332 2222
Q ss_pred CCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCC
Q 009604 427 GLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDN 506 (531)
Q Consensus 427 gl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~ 506 (531)
. .|..+++.++.. ...++.+.|...++.+..|..+. .++
T Consensus 327 ~----------------gg~~~~~~~~~~--~~~~~~~~l~~~gv~v~~g~~f~-----------------------~~~ 365 (394)
T PRK06836 327 Q----------------GAFYLFPKSPEE--DDVAFCEKAKKHNLLLVPGSGFG-----------------------CPG 365 (394)
T ss_pred C----------------ceEEEEEeCCCC--CHHHHHHHHHhCCEEEECchhcC-----------------------CCC
Confidence 1 244667766531 34456666766566665553321 136
Q ss_pred eEEEEecCCCHHH---HHHHHHHHHH
Q 009604 507 LVRFSFGVEDFED---LKADVLQALH 529 (531)
Q Consensus 507 lIRlSvGlE~~ed---li~dL~~AL~ 529 (531)
.+||+++. +.++ .++.|.++|+
T Consensus 366 ~iRi~~~~-~~~~~~~~i~~l~~~l~ 390 (394)
T PRK06836 366 YFRLSYCV-DTETIERSLPAFEKLAK 390 (394)
T ss_pred eEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 89999994 4333 3444555554
No 167
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.84 E-value=8.3e-19 Score=183.06 Aligned_cols=256 Identities=22% Similarity=0.264 Sum_probs=168.0
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcC---CCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEE
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTT---DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFT 292 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~---~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~l 292 (531)
++++++++|++|+..++.+++++||+|+++. +.|.... ..++..|.++ +...++++++. . + ++++|++
T Consensus 72 e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~----~~~~l~ga~~--~~~~~l~~l~~-~-~-~~~lIii 142 (346)
T TIGR03576 72 EKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIP----RSCKLAGAEY--FESDELSELKK-I-D-GTSLVVI 142 (346)
T ss_pred ceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHH----HHHHHcCCEE--eccCCHHHHhh-C-c-CceEEEE
Confidence 7899999999999999999999999999753 4555433 3445557665 33356666543 2 3 3788888
Q ss_pred eCCCCCCCcc---cCHHHHHHHHHhcCCEEEEeCCCCCCcc----c-cccccCCcEEEECCccccccCCCceEEEEEeCh
Q 009604 293 ESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----Q-KALSLGADLVLHSATKFIGGHNDVLAGSISGSG 364 (531)
Q Consensus 293 esP~NPtG~v---~dl~~I~~la~~~gi~lIvD~a~a~~~~----~-~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~ 364 (531)
+ ++||+|.+ .|+++|+++|+++|++|++||+|+.+.. . .....+.|+++.|+||.++|. .+|++++++
T Consensus 143 t-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~---r~G~v~~~~ 218 (346)
T TIGR03576 143 T-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGP---RGGLLAGRK 218 (346)
T ss_pred E-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhcccc---ceEEEEeCH
Confidence 5 56899998 5789999999999999999999987532 1 123456899999999987654 389999999
Q ss_pred HHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcC
Q 009604 365 KLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT 442 (531)
Q Consensus 365 ~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~ 442 (531)
++++.++.....++.+.++..++.++.+|+.+. .+.+...++...+.+.|.+ + .+ +|.
T Consensus 219 ~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~---~-~~-~~~--------------- 278 (346)
T TIGR03576 219 ELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK---L-NV-ERT--------------- 278 (346)
T ss_pred HHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh---C-CC-CcC---------------
Confidence 999999887766665556666666666776532 2222333344444444542 1 11 121
Q ss_pred CcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC-----H
Q 009604 443 GFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED-----F 517 (531)
Q Consensus 443 g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~-----~ 517 (531)
.++++.+.+++.. ..+...+.|+..++.+..|..+ + + .+++||||+|.++ .
T Consensus 279 -~~~f~~~~~~~~~-~~~~~~~ll~~~gV~v~~~~~f-----~----------------~-~~~~vRis~~~~~~~~~~~ 334 (346)
T TIGR03576 279 -PTGFVIKGVEEEK-LIEIGLDLLRNYGIITITAVGM-----P----------------G-ASKTLRFDLAAKDAERIGD 334 (346)
T ss_pred -CCeEEEEeCCCCC-HHHHHHHHHHhCCEEEeCCccc-----C----------------C-CCCeEEEEEecChHHhcCH
Confidence 2347777775421 1122234444445555544211 0 1 1579999999876 5
Q ss_pred HHHHHHHHHHH
Q 009604 518 EDLKADVLQAL 528 (531)
Q Consensus 518 edli~dL~~AL 528 (531)
+.+++.|++.|
T Consensus 335 ~~~~~al~~~~ 345 (346)
T TIGR03576 335 DYLVEAVKDSL 345 (346)
T ss_pred HHHHHHHHhcc
Confidence 66666666544
No 168
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.84 E-value=1.1e-18 Score=189.86 Aligned_cols=200 Identities=16% Similarity=0.147 Sum_probs=134.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCC-
Q 009604 215 AESTVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNN- 285 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all-~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~- 285 (531)
.+++++++++++++.+++.+++ ++||+|+++.|.|......+ +..|.++..++. .|+++|++++++.
T Consensus 138 ~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~----~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~ 213 (481)
T PTZ00377 138 PSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAI----TLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAV 213 (481)
T ss_pred hhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHH----HHcCCEEEEEEeccccCCCCCHHHHHHHHHHHH
Confidence 4555555555699999999998 79999999999998755433 445666655532 3679999988641
Q ss_pred ----CcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc-----cccc-----ccC-------CcEE
Q 009604 286 ----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKAL-----SLG-------ADLV 341 (531)
Q Consensus 286 ----~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~-----~~~l-----~~g-------aDiv 341 (531)
++|+|++++|+||||.+++ +++|+++|+++|++||+||+|..... ...+ .+. .-++
T Consensus 214 ~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~ 293 (481)
T PTZ00377 214 RNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVS 293 (481)
T ss_pred hcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEE
Confidence 4899999999999999998 77889999999999999999864321 0010 111 1378
Q ss_pred EECCcccc-ccCCCceEEEEEe---ChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH----------HHHHHH----HHH
Q 009604 342 LHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----------TLHLRV----QQQ 403 (531)
Q Consensus 342 v~S~sK~l-gg~g~v~gG~iv~---~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~----------tl~~r~----~~~ 403 (531)
+.|+||.+ +-.|.+ .|++++ ++++++.+....... ...+.....++...++ .....+ ++.
T Consensus 294 ~~S~SK~~~~~~GlR-iG~~~~~~~p~~li~~l~~~~~~~-~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (481)
T PTZ00377 294 FHSTSKGIIGECGRR-GGYFELTNIPPEVREQIYKLASIN-LCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSL 371 (481)
T ss_pred EecCCcccccCCcCc-eEEEEEeCCCHHHHHHHHHHhhee-cCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHH
Confidence 89999975 435544 677765 788888887755322 1233333333222221 121222 223
Q ss_pred HHHHHHHHHHHHcCCCc
Q 009604 404 NSTALRMAKILEAHPKV 420 (531)
Q Consensus 404 ~~na~~La~~L~~~p~v 420 (531)
.++++.+.+.|++++++
T Consensus 372 ~~rr~~l~~~L~~~~g~ 388 (481)
T PTZ00377 372 KRRAELLTDELNKIEGV 388 (481)
T ss_pred HHHHHHHHHHHhcCCCc
Confidence 56677788888877654
No 169
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.84 E-value=7.2e-19 Score=184.13 Aligned_cols=247 Identities=16% Similarity=0.162 Sum_probs=158.3
Q ss_pred CcEEEeCChHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeC
Q 009604 216 ESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTES 294 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al-l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~les 294 (531)
+++++++++++++..++..+ +++||+|+++.|+|...... ++..|.++..++ +++++. .+ ++++|++++
T Consensus 81 ~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~--~~~~l~---~~-~~~~v~~~~ 150 (357)
T TIGR03539 81 TAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVG----ALLAGATPVAAD--DPTELD---PV-GPDLIWLNS 150 (357)
T ss_pred CeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHH----HHhcCCEEeccC--ChhhcC---cc-CccEEEEeC
Confidence 44554555569999988877 79999999999999765432 345688777664 444332 23 589999999
Q ss_pred CCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc-ccc---cc-------cCCcEEEECCccccccCCCceEEEE
Q 009604 295 PTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-QKA---LS-------LGADLVLHSATKFIGGHNDVLAGSI 360 (531)
Q Consensus 295 P~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~-~~~---l~-------~gaDivv~S~sK~lgg~g~v~gG~i 360 (531)
|+||||.+++ +++|.++|+++|+++|+|++|..... ..+ +. ....+++.|+||.++.+| ..+|++
T Consensus 151 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-~R~G~~ 229 (357)
T TIGR03539 151 PGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAG-YRAGFV 229 (357)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCc-eeEEEE
Confidence 9999999997 55788889999999999999864211 011 11 112488999999997666 457888
Q ss_pred EeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhh
Q 009604 361 SGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIA 437 (531)
Q Consensus 361 v~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~ 437 (531)
++++++++.++..+...+...+......+...++ .+....+...++.+.+.+.|.++ ++. +..|.
T Consensus 230 i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~-~~~p~---------- 297 (357)
T TIGR03539 230 AGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFR-IDHSE---------- 297 (357)
T ss_pred ecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-CcCCC----------
Confidence 9999999888776655444444444333333342 22222334445666777788764 221 11111
Q ss_pred hhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009604 438 TQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 515 (531)
Q Consensus 438 ~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE 515 (531)
.|-++++.++. ....+.+.|...++.+..|..+. + -.++.||||++.+
T Consensus 298 ------~~~~~~~~~~~---~~~~~~~~l~~~gV~v~pg~~f~----~-----------------~~~~~iRis~~~~ 345 (357)
T TIGR03539 298 ------AGLYLWATRGE---DAWDTVDRLAELGILVAPGDFYG----P-----------------AGSQHVRVALTAT 345 (357)
T ss_pred ------ccEEEEEECCC---CHHHHHHHHHhCCEEECCccccC----C-----------------CCCCeEEEEecCC
Confidence 23356666543 23455666655566666554321 0 0147899999973
No 170
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.84 E-value=7.3e-19 Score=184.40 Aligned_cols=244 Identities=18% Similarity=0.175 Sum_probs=158.2
Q ss_pred EEEeCCh-HHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCC
Q 009604 218 TVIMASG-MSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 295 (531)
Q Consensus 218 ~i~~sSG-~~Ai~~al~al-l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP 295 (531)
.|++++| ++++..++..+ +++||+|+++.|.|..... .+...|+++..++ ++++++. + ++++|++++|
T Consensus 88 ~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~--~~~~l~~---~-~~~~v~~~~p 157 (364)
T PRK07865 88 AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV----GARLAGATVVRAD--SLTELGP---Q-RPALIWLNSP 157 (364)
T ss_pred cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH----HHHhcCCEEEecC--ChhhCCc---c-cceEEEEcCC
Confidence 4555555 58998887777 7999999999999987543 3345688877765 3444332 3 5899999999
Q ss_pred CCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----ccc-------ccCCcEEEECCccccccCCCceEEEEE
Q 009604 296 TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-------SLGADLVLHSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 296 ~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~l-------~~gaDivv~S~sK~lgg~g~v~gG~iv 361 (531)
+||||.+++ +++|.++|+++|++||+||+|...... ..+ .....+++.|+||.++.+|. .+|+++
T Consensus 158 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-RiG~i~ 236 (364)
T PRK07865 158 SNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGY-RAGFVA 236 (364)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCce-eeEEEe
Confidence 999999987 467888899999999999998743211 101 11234899999999976664 478999
Q ss_pred eChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhh
Q 009604 362 GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIAT 438 (531)
Q Consensus 362 ~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~ 438 (531)
+++++++.++......+...+......+...++ .+....+...++.+.+.+.|+++ ++. +..|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------- 303 (364)
T PRK07865 237 GDPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFR-VDHSE----------- 303 (364)
T ss_pred cCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCC-----------
Confidence 999999988876655554455544444333333 23333344456667777788764 221 11111
Q ss_pred hhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009604 439 QQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 514 (531)
Q Consensus 439 ~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl 514 (531)
.|.++++.++.+ ...+.+.|...++.+..|..+. + -.+++|||+++.
T Consensus 304 -----~~~~~~~~~~~~---~~~~~~~l~~~gv~v~pg~~f~----~-----------------~~~~~iRi~~~~ 350 (364)
T PRK07865 304 -----AGLYLWATRGED---CWDTVAWLAERGILVAPGDFYG----P-----------------AGAQHVRVALTA 350 (364)
T ss_pred -----ccEEEEEeCCCC---HHHHHHHHHHCCEEEeCccccC----c-----------------CCCCEEEEEecC
Confidence 233566666432 2345555655566666553221 0 024789999986
No 171
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.84 E-value=3.6e-19 Score=185.84 Aligned_cols=261 Identities=18% Similarity=0.213 Sum_probs=172.3
Q ss_pred CCcEEEeCChH-HHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-------CCCHHHHHHhccCC
Q 009604 215 AESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-------PADMEGLEAALNNN 285 (531)
Q Consensus 215 ~e~~i~~sSG~-~Ai~~al~al-l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-------~~d~e~Le~al~~~ 285 (531)
.+..+++++|+ +++..++..+ .++||.|+++.|+|......+ +..|+++..++ ..|+++|++.+++.
T Consensus 67 ~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 142 (363)
T PF00155_consen 67 PEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAA----RLLGAEVIPVPLDSENDFHLDPEALEEALDEL 142 (363)
T ss_dssp GGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHH----HHTTSEEEEEEEEETTTTEETHHHHHHHHHTS
T ss_pred cceEEEEecccccchhhhhhcccccccccceecCCccccccccc----cccCceeeeccccccccccccccccccccccc
Confidence 45478888887 6676666667 679999999999999876544 44577776666 34899999988762
Q ss_pred -----CcEEEEEeCCCCCCCcccCHHHHHHH---HHhcCCEEEEeCCCCCCcccc--------ccccCC-cEEEECCccc
Q 009604 286 -----NVSLFFTESPTNPFLRCVDVKLVSDL---CHKKGAIVCIDGTFATPLNQK--------ALSLGA-DLVLHSATKF 348 (531)
Q Consensus 286 -----~tklV~lesP~NPtG~v~dl~~I~~l---a~~~gi~lIvD~a~a~~~~~~--------~l~~ga-Divv~S~sK~ 348 (531)
++++|++++|+||||.+++.+++.++ |+++|++||+|++|....... ....+. .+++.|+||.
T Consensus 143 ~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 222 (363)
T PF00155_consen 143 PSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKS 222 (363)
T ss_dssp HTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTT
T ss_pred cccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeecccc
Confidence 37899999999999999986655555 999999999999987654331 112233 3899999999
Q ss_pred cccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHcCCCce
Q 009604 349 IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-------KTLHLRVQQQNSTALRMAKILEAHPKVK 421 (531)
Q Consensus 349 lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L-------~tl~~r~~~~~~na~~La~~L~~~p~v~ 421 (531)
+|..|.+ .|++++++++++.++........ +......+...+ +.+..+.++..++++.+.+.|++. ++.
T Consensus 223 ~g~~GlR-vG~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~ 298 (363)
T PF00155_consen 223 FGLPGLR-VGYIVAPPELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GIT 298 (363)
T ss_dssp TTSGGGT-EEEEEEEHHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSE
T ss_pred ccccccc-cccccchhhhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhh
Confidence 9877654 67888888899988877665444 322222222121 145556677778888889999876 332
Q ss_pred EEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-CcccccCCcccccccCccccccCCCHHHHHh
Q 009604 422 RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQPAIMSYWDLSQSERLK 500 (531)
Q Consensus 422 ~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~-~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~ 500 (531)
. ..+. .|.++++.++. .+...|.+.|... ++.+..|...
T Consensus 299 ~-~~~~----------------~~~~~~~~~~~--~~~~~l~~~L~~~~gi~v~pg~~~--------------------- 338 (363)
T PF00155_consen 299 V-LPPE----------------AGFFLWVRLDP--NDAEELAQELLEEYGILVRPGSYF--------------------- 338 (363)
T ss_dssp E-EHHS----------------BSSEEEEEESH--HHHHHHHHHHHHHHTEEEEEGGGG---------------------
T ss_pred e-eecc----------------CccEEEEEccc--chHHHHHHHHHHhCCEEEEecCCC---------------------
Confidence 2 1111 24456666643 2455666666443 5555544332
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHH
Q 009604 501 YGIMDNLVRFSFGVEDFEDLKADVLQ 526 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE~~edli~dL~~ 526 (531)
+. ++.|||+++.-+ ++.++.+.+
T Consensus 339 -~~-~~~iRi~~a~~~-~e~~~~~~~ 361 (363)
T PF00155_consen 339 -GV-PGYIRISLASHS-EEDLEEALE 361 (363)
T ss_dssp -TS-TTEEEEEGGCSC-HHHHHHHHH
T ss_pred -CC-CCEEEEEeccCC-HHHHHHHHh
Confidence 22 578999994333 333344333
No 172
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.84 E-value=8e-19 Score=186.95 Aligned_cols=268 Identities=13% Similarity=0.124 Sum_probs=173.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCC---EEEEcCCCccchHHHHHhhcccCCcEE----EEeCC-----CCHHHHHHhc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPKMGITA----TVIDP-----ADMEGLEAAL 282 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD---~VIv~~~~y~~t~~~~~~~l~~~Gi~v----~~vd~-----~d~e~Le~al 282 (531)
++++++++|+++++++++.+++++|+ +|+++..+|++....+...+++.|+++ ..++. .+++++++.+
T Consensus 86 ~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~ 165 (406)
T TIGR01814 86 EDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTI 165 (406)
T ss_pred CCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHH
Confidence 45677888888999999998876653 688888999987665544556667776 34432 2678888877
Q ss_pred c---CCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccc-cCCCceE
Q 009604 283 N---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIG-GHNDVLA 357 (531)
Q Consensus 283 ~---~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lg-g~g~v~g 357 (531)
+ + +|++|++++++|.+|.+.|+++|.++||++|+++++|++++.+. ..+...+|+|+++.|.+|+++ |+| +
T Consensus 166 ~~~~~-~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG---~ 241 (406)
T TIGR01814 166 EKNGD-DIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG---A 241 (406)
T ss_pred HhcCC-CeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC---e
Confidence 4 4 59999999999999999999999999999999999999988764 455556799999999999986 443 4
Q ss_pred EEEEeChHHHHHHHHHh-h--------------h--------cCCCchHHHHHHHHHHHHHH-----HHHHHHHHHHHHH
Q 009604 358 GSISGSGKLVTQIRNLH-H--------------V--------LGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALR 409 (531)
Q Consensus 358 G~iv~~~~li~~l~~~~-~--------------~--------~G~~~s~~~a~l~l~~L~tl-----~~r~~~~~~na~~ 409 (531)
|+++.++. .+.+.... . . ..++.+....+.+..+++.+ ....++..+..++
T Consensus 242 ~l~v~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~ 320 (406)
T TIGR01814 242 GAFVHEKH-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDY 320 (406)
T ss_pred EEEEehhh-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 44444433 22221100 0 0 00123333333333344443 2223334445555
Q ss_pred HHHHHHcCC----CceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccC
Q 009604 410 MAKILEAHP----KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 485 (531)
Q Consensus 410 La~~L~~~p----~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p 485 (531)
+.+.|++.+ ++. +.-|. .+ ...+++++|.++. ....+.+.|...++.+..
T Consensus 321 l~~~l~~~~~~~~~~~-i~~~~---~~---------~~r~~~v~~~~~~---~~~~~~~~L~~~gi~v~~---------- 374 (406)
T TIGR01814 321 LEELIKARCGGPPVLT-IITPR---DH---------AQRGCQLSLTHPV---PGKAVFQALIKRGVIGDK---------- 374 (406)
T ss_pred HHHHHHhhcCCCCceE-EeCCC---Ch---------hhcCCeEEEEecC---CHHHHHHHHHHCCEEEec----------
Confidence 666665532 232 22221 11 1136788998862 234455555444443311
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEe-cCCCHHHHHHHHHHHHHh
Q 009604 486 AIMSYWDLSQSERLKYGIMDNLVRFSF-GVEDFEDLKADVLQALHA 530 (531)
Q Consensus 486 ~~~s~~~~~~~~~~~~gi~~~lIRlSv-GlE~~edli~dL~~AL~~ 530 (531)
..++.||+|+ ++.++++.|+.+.++|++
T Consensus 375 -----------------~~~~~iRiS~~~~~nt~~did~l~~~l~~ 403 (406)
T TIGR01814 375 -----------------REPSVIRVAPVPLYNTFVDVYDAVNVLEE 403 (406)
T ss_pred -----------------cCCCeEEEechhccCCHHHHHHHHHHHHH
Confidence 0136899999 589999999999998875
No 173
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.84 E-value=1.1e-18 Score=189.22 Aligned_cols=271 Identities=15% Similarity=0.168 Sum_probs=169.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccC--
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN-- 284 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~-- 284 (531)
.++++++++++.+++.+++.++++|||.|+++.|.|......+. ...|+++..++. .|++++++++++
T Consensus 110 ~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~---~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~ 186 (468)
T PLN02450 110 DPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLK---WRTGVEIVPIHCSSSNGFQITESALEEAYQQAQ 186 (468)
T ss_pred ChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHh---hcCCcEEEEEecCCccCCcCCHHHHHHHHHHHH
Confidence 34555554444599999999999999999999999987543332 135777766653 156888887753
Q ss_pred ---CCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----cccc------------cCCcEE
Q 009604 285 ---NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS------------LGADLV 341 (531)
Q Consensus 285 ---~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l~------------~gaDiv 341 (531)
.++|+|++++|+||||.+++ +++|.++|+++|++||+||+|+..... ..+. ...-++
T Consensus 187 ~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~ 266 (468)
T PLN02450 187 KLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHI 266 (468)
T ss_pred hcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEE
Confidence 24899999999999999997 456778889999999999998742211 1111 123488
Q ss_pred EECCccccccCCCceEEEEEeChH-HHHHHHHHhhhcCCCchHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Q 009604 342 LHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKT-------LHLRVQQQNSTALRMAKI 413 (531)
Q Consensus 342 v~S~sK~lgg~g~v~gG~iv~~~~-li~~l~~~~~~~G~~~s~~~a~l~l~~L~t-------l~~r~~~~~~na~~La~~ 413 (531)
+.|+||.++..|.+ .|+++++++ +++.+.... .++. .+.....++...|+. +....++..+..+.+.+.
T Consensus 267 l~S~SK~~~l~GlR-iG~li~~~~~l~~~~~~~~-~~~~-~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~ 343 (468)
T PLN02450 267 VYSLSKDLGLPGFR-VGAIYSNDEMVVSAATKMS-SFGL-VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSG 343 (468)
T ss_pred EEeccccCCCCCcc-EEEEEECCHHHHHHHHHHh-hcCC-CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999866654 678888754 455554443 2222 333333333333322 333445555667777888
Q ss_pred HHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-----HHHHHHHHHHc-CCCCcccccCCcccccccCcc
Q 009604 414 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTATIKFIDAL-KIPYIAPSFGGCESIVDQPAI 487 (531)
Q Consensus 414 L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-----~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~ 487 (531)
|+++ ++. + ++. ..|..+++.++.. .+...++.+.| +..++.+..|..+..
T Consensus 344 L~~~-gi~-~-~~~---------------~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~------ 399 (468)
T PLN02450 344 LEAA-GIK-C-LKS---------------NAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHC------ 399 (468)
T ss_pred HHHc-CCc-c-cCC---------------CceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCC------
Confidence 8775 331 1 111 1344788887521 11223444444 445777777744310
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHH
Q 009604 488 MSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 529 (531)
Q Consensus 488 ~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~---edli~dL~~AL~ 529 (531)
..++++||+++..+. ++.++.|.+++.
T Consensus 400 ---------------~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~ 429 (468)
T PLN02450 400 ---------------TEPGWFRVCFANMSEETLDLAMKRLKSFVE 429 (468)
T ss_pred ---------------CCCCEEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 125799999996333 344555555554
No 174
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.84 E-value=1.6e-18 Score=182.95 Aligned_cols=292 Identities=13% Similarity=0.091 Sum_probs=193.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHHHHhccCCC
Q 009604 214 GAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGLEAALNNNN 286 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~al-l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~~~~ 286 (531)
|.+++++++||++|+.+++.++ +++||+|+++.++|.++...+ ...|+++.++|. .|++++++++++ +
T Consensus 45 g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~----~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~ 119 (375)
T PRK11706 45 GSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTMNIDETLIEAAITP-K 119 (375)
T ss_pred CCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcCCcCHHHHHHhcCC-C
Confidence 5678999999999999887766 799999999999999876443 445888888864 378999999987 4
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc--ccccccCCcEEEECCc--cccccCCCceEEEEEe
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKALSLGADLVLHSAT--KFIGGHNDVLAGSISG 362 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~--~~~l~~gaDivv~S~s--K~lgg~g~v~gG~iv~ 362 (531)
+|+|++. |++|...|+++|.++|+++|++||+|++++.+.. ..+.....|+.++|++ |.++... -|++++.
T Consensus 120 tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K~l~~g~--gG~~~~~ 194 (375)
T PRK11706 120 TRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNYTAGE--GGALLIN 194 (375)
T ss_pred CeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCccccccC--CeEEEEC
Confidence 9999964 5789999999999999999999999999876532 2333334688899977 9997532 1345555
Q ss_pred ChHHHHHHHHHhhh-------------------cC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCce
Q 009604 363 SGKLVTQIRNLHHV-------------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVK 421 (531)
Q Consensus 363 ~~~li~~l~~~~~~-------------------~G--~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~ 421 (531)
++++.++++..+.. .| ..++...+.+++..++.++...++..++++.+.+.|.+.+...
T Consensus 195 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~ 274 (375)
T PRK11706 195 DPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAG 274 (375)
T ss_pred CHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCC
Confidence 67787777655421 12 2235567777788889998888888899999999998765321
Q ss_pred EEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCcccc----ccCCCHHH
Q 009604 422 RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS----YWDLSQSE 497 (531)
Q Consensus 422 ~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s----~~~~~~~~ 497 (531)
.+..|..+.... ....++.+.++.. ....++++.|...++.++.+. ..+..+|.... +..++..+
T Consensus 275 ~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~r~~l~~~L~~~gI~~~~~~-~p~~~~~~~~~~~~~~~~~p~a~ 343 (375)
T PRK11706 275 RIELPSIPDDCK---------HNAHMFYIKLRDL-EDRSALINFLKEAGIMAVFHY-IPLHSSPAGERFGRFHGEDRYTT 343 (375)
T ss_pred eeecCCCCCCCc---------eeeEEEEEEECCc-CCHHHHHHHHHHCCCCccccC-CccCcchhhHhcCCCCCCChHHH
Confidence 222232211000 0123566666532 345678888877777766542 23322332111 11223222
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 498 RLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 498 ~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
. +....|-|-+...-+++.++.+.++|++
T Consensus 344 ~----~~~~~l~lP~~~~l~~~~~~~i~~~i~~ 372 (375)
T PRK11706 344 K----ESERLLRLPLFYNLTDVEQRTVIDTILE 372 (375)
T ss_pred H----HHhCcEeccCCCCCCHHHHHHHHHHHHH
Confidence 2 2345566655544445556666666553
No 175
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.84 E-value=1e-18 Score=186.07 Aligned_cols=272 Identities=14% Similarity=0.145 Sum_probs=179.5
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccC---CCc
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNN---NNV 287 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~---~~t 287 (531)
+.++++++|++++..++..++++||+|+++.+.|.+.. +...+++.|++++.++. .|+++|++++++ +++
T Consensus 61 ~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~ 138 (401)
T PLN02409 61 TPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKI 138 (401)
T ss_pred CEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCc
Confidence 35788888899999999999999999999998887643 33556777888887753 368999999975 258
Q ss_pred EEEEEeCCCCCCCcccCHHHHHHH--HHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeCh
Q 009604 288 SLFFTESPTNPFLRCVDVKLVSDL--CHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 364 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl~~I~~l--a~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~ 364 (531)
++|++.++.||||.+.|+++|.++ |+++|+++|+|++++.+. ..+..++|+|+++.|.+|+++++.+ .|+++.++
T Consensus 139 k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G--~G~l~~~~ 216 (401)
T PLN02409 139 KAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTG--LGIVCASP 216 (401)
T ss_pred cEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCC--cceeEECH
Confidence 999999999999999999999999 999999999999987543 3445567999999999999976443 68888998
Q ss_pred HHHHHHHHHhh--------------hcC----CCchHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCCce
Q 009604 365 KLVTQIRNLHH--------------VLG----GALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEAHPKVK 421 (531)
Q Consensus 365 ~li~~l~~~~~--------------~~G----~~~s~~~a~l~l~~L~tl-----~~r~~~~~~na~~La~~L~~~p~v~ 421 (531)
++++++..... ..| .+.+....+.+..+++.+ +.+.+++.+.++.+.+.|++. +++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~ 295 (401)
T PLN02409 217 KALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLK 295 (401)
T ss_pred HHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 88777653110 011 122222223333344432 233445556667777777654 332
Q ss_pred EEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHh
Q 009604 422 RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 500 (531)
Q Consensus 422 ~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~ 500 (531)
+..|. +.. ..+.+++|.++.+ .+..++.+.| +.+++-+..|.-.
T Consensus 296 -~~~~~----~~~--------~s~~v~~~~~p~~-~~~~~l~~~l~~~~~i~i~~G~~~--------------------- 340 (401)
T PLN02409 296 -LCTKK----PEW--------RSDTVTAVVVPEG-IDSAEIVKNAWKKYNLSLGLGLNK--------------------- 340 (401)
T ss_pred -eccCC----hhh--------cccceEEEeCCCC-CCHHHHHHHHHHhCCEEEEcCCCc---------------------
Confidence 22111 110 1346777887533 2233444444 3344444443110
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 501 YGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
..+..+||+.--+++++.+..+..+|+
T Consensus 341 --~~~~~~Rig~~g~~~~~~~~~~~~~~~ 367 (401)
T PLN02409 341 --VAGKVFRIGHLGNVNELQLLGALAGVE 367 (401)
T ss_pred --ccCCEEEEcCCCCCCHHHHHHHHHHHH
Confidence 125689999766665555555555554
No 176
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.84 E-value=9.6e-19 Score=181.36 Aligned_cols=190 Identities=19% Similarity=0.264 Sum_probs=129.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEe
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTE 293 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~le 293 (531)
+.+++++++++.++|.+++ .+.+||+|+++.|+|.... ..++..|+++..++. ++++++++ ++++++++
T Consensus 63 ~~~~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~----~~~~~~g~~~~~v~~---~~~~~~~~--~~~~v~l~ 131 (330)
T PRK05664 63 GAPQLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHA----HAWRRAGHQVRELDE---AEVEAALD--SLDVLVVV 131 (330)
T ss_pred CCCCEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHH----HHHHHcCCeEEEech---hhHhhhhc--CCCEEEEe
Confidence 3454444444448988875 3589999999999998755 345566888888874 45666664 37899999
Q ss_pred CCCCCCCcccCHH---HHHHHHHhcCCEEEEeCCCCCCccccc---cc-cCCcEEEECCccccccCCCceEEEEEeChHH
Q 009604 294 SPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQKA---LS-LGADLVLHSATKFIGGHNDVLAGSISGSGKL 366 (531)
Q Consensus 294 sP~NPtG~v~dl~---~I~~la~~~gi~lIvD~a~a~~~~~~~---l~-~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l 366 (531)
+|+||||.+++.+ +|+++|+++|++||+||+|.......+ +. ...-+++.|+||.+|.+|.+ .|++++++++
T Consensus 132 nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlR-iG~~v~~~~l 210 (330)
T PRK05664 132 NPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGAR-LGFVLAEPAL 210 (330)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcc-eEEEEeCHHH
Confidence 9999999999855 555567889999999999864422111 11 11238899999999866644 7888899999
Q ss_pred HHHHHHHhhhcCCCchHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHcC
Q 009604 367 VTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 367 i~~l~~~~~~~G~~~s~~~a~l~l~~L~t---l~~r~~~~~~na~~La~~L~~~ 417 (531)
++.+......++ .+....+++...|.. .....++..++++.+.+.|+++
T Consensus 211 ~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (330)
T PRK05664 211 LRALAELLGPWT--VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH 262 (330)
T ss_pred HHHHHHhcCCCC--CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 988876644332 233333333333332 2233444556677888888865
No 177
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.84 E-value=1.3e-19 Score=187.70 Aligned_cols=145 Identities=20% Similarity=0.229 Sum_probs=125.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-cCCC----EEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccC
Q 009604 215 AESTVIMASGMSASTVMLLALV-PAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNN 284 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all-~pGD----~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~ 284 (531)
..+++|+.++|++++++++.+. ..+| +||+...+|......+ ..++..|+++++++.. |.+.++++|++
T Consensus 102 ~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~-~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~ 180 (428)
T KOG1549|consen 102 PSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC-RALQEEGLEVTYLPVEDSGLVDISKLREAIRS 180 (428)
T ss_pred CCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHH-HHHHhcCeEEEEeccCccccccHHHHHHhcCC
Confidence 4466666677799999999874 4567 9999999999877666 4566778999998753 78999999999
Q ss_pred CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEEEEeC
Q 009604 285 NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS 363 (531)
Q Consensus 285 ~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~ 363 (531)
+|++|.+.+.+|..|.++|+++|.++|+++|+.+++|.+++.+ ...+..++++|++..|+||++|+++ .|+++.+
T Consensus 181 -~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~---iGaLYvr 256 (428)
T KOG1549|consen 181 -KTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPG---IGALYVR 256 (428)
T ss_pred -CceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccccCCCc---ceEEEEc
Confidence 4999999999999999999999999999999999999999876 4567778999999999999999998 6888887
Q ss_pred h
Q 009604 364 G 364 (531)
Q Consensus 364 ~ 364 (531)
+
T Consensus 257 ~ 257 (428)
T KOG1549|consen 257 R 257 (428)
T ss_pred c
Confidence 5
No 178
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.83 E-value=1.2e-18 Score=182.69 Aligned_cols=242 Identities=16% Similarity=0.154 Sum_probs=162.2
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCC-CcEE
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN-NVSL 289 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~-~tkl 289 (531)
+..++++||+.++..++.++..+||+|++..+.|.+.. +...++..|+++..++. .|+++++++++++ ++++
T Consensus 57 ~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~ 134 (368)
T PRK13479 57 TCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGAR--IAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITH 134 (368)
T ss_pred eEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHH--HHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcE
Confidence 34667889999999999999999999998877776643 23456667888877753 3689999988643 3678
Q ss_pred EEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChHHHH
Q 009604 290 FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT 368 (531)
Q Consensus 290 V~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~ 368 (531)
|++++|+||||.+.|+++|.++|+++|+++|+|+++..+. ..+...+++|+++.|++|++.|+.+ .|+++.++++++
T Consensus 135 v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~ 212 (368)
T PRK13479 135 VALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPG--FGFVIARRSELE 212 (368)
T ss_pred EEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccccccCCC--ceEEEECHHHHH
Confidence 9999999999999999999999999999999998765432 2344456899999999998755432 489999988877
Q ss_pred HHHHHhhh--------------cC---CCchHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 369 QIRNLHHV--------------LG---GALNPNAAYLIIRGMKT------LHLRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 369 ~l~~~~~~--------------~G---~~~s~~~a~l~l~~L~t------l~~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
.+...... .+ .+.+....+.+..+++. +..+.++..+.++.+.+.|+++ ++. +..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~ 290 (368)
T PRK13479 213 ACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFE-PLL 290 (368)
T ss_pred HhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCc-ccC
Confidence 76532110 01 12222222222222322 3445566667778888888776 221 111
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCCcccccC
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFG 476 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~-~~~~~fl~~L~~~~iavS~G 476 (531)
+. .+ ..+.++.|.++... .+..++.+.|...++.++.|
T Consensus 291 ~~-----~~--------~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g 329 (368)
T PRK13479 291 DA-----EI--------QSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPG 329 (368)
T ss_pred Cc-----hh--------cCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecC
Confidence 11 10 12346777765421 23457777776667666544
No 179
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.83 E-value=1.5e-18 Score=181.70 Aligned_cols=269 Identities=17% Similarity=0.134 Sum_probs=174.3
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCC-CcEEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN-NVSLF 290 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~-~tklV 290 (531)
.+++++||++++..++.+++.+||++++..+.+.+.. +...++..|++++.++. .|+++++++++++ ++++|
T Consensus 56 ~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v 133 (363)
T TIGR02326 56 SVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHI 133 (363)
T ss_pred EEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEE
Confidence 4778889999999999999989888766555444432 22445667888877654 3789999998753 36788
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHH
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ 369 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~ 369 (531)
++.++.||||.+.|+++|.++||++|+++++|++++.+. ..+...+++|+++.|++|+++|+.+ .|+++.+++.+++
T Consensus 134 ~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~ 211 (363)
T TIGR02326 134 ALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPG--FGFVIARQAELAA 211 (363)
T ss_pred EEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccccccCCc--ceEEEECHHHHHH
Confidence 999999999999999999999999999999999876543 3344567899999999999865532 4888888877765
Q ss_pred HHHHhh---------------hcC---CCchHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 370 IRNLHH---------------VLG---GALNPNAAYLIIRGMKT------LHLRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 370 l~~~~~---------------~~G---~~~s~~~a~l~l~~L~t------l~~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
+..... ..| .+.+....+.+..+++. +..+.++..+++..+.+.|+++ ++.. ..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~ 289 (363)
T TIGR02326 212 CKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEP-LL 289 (363)
T ss_pred hhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCee-cc
Confidence 431000 001 12223332322233332 3345566677788888888775 3321 11
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCC
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM 504 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~ 504 (531)
+. .. ..+.+++|.++.. ......+.+.|+..++.++.|... .
T Consensus 290 ~~-----~~--------~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~------------------------~ 332 (363)
T TIGR02326 290 DD-----EI--------QSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVS------------------------Q 332 (363)
T ss_pred Cc-----cc--------CCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCC------------------------C
Confidence 10 00 1234577887642 123456777776667666654210 1
Q ss_pred CCeEEEEe-cCCCHHHHHHHHHHHHH
Q 009604 505 DNLVRFSF-GVEDFEDLKADVLQALH 529 (531)
Q Consensus 505 ~~lIRlSv-GlE~~edli~dL~~AL~ 529 (531)
++.|||++ |. .+.+.++.+.++|+
T Consensus 333 ~~~iRi~~~~~-~~~edv~~~l~~l~ 357 (363)
T TIGR02326 333 VDCFRIGNIGE-VDAADITRLLTAIG 357 (363)
T ss_pred CCEEEEecCCC-CCHHHHHHHHHHHH
Confidence 36899996 64 34444445555544
No 180
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.83 E-value=3.7e-18 Score=182.63 Aligned_cols=266 Identities=16% Similarity=0.140 Sum_probs=191.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--------------cCCCEEEEcCCCccchHHHHHhhcccC-CcEEEEeCCCCHHHH
Q 009604 214 GAESTVIMASGMSASTVMLLALV--------------PAGGHIVTTTDCYRKTRIFIETVLPKM-GITATVIDPADMEGL 278 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all--------------~pGD~VIv~~~~y~~t~~~~~~~l~~~-Gi~v~~vd~~d~e~L 278 (531)
|.+++++++||..|+..++.++. ..+|.|+++...|.+.+..++ +.+.. +.++..++.+|+++|
T Consensus 161 g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~-ls~~~~~a~~~~f~HND~~~L 239 (476)
T PLN02955 161 KKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR-LAERQGNVEVFVYRHCDMYHL 239 (476)
T ss_pred CCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH-hccccCCceEEEeCCCCHHHH
Confidence 78999999999999999888772 456789999999988776653 23323 578888899999999
Q ss_pred HHhccCC--CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc-------c--cccCCcEEEECCcc
Q 009604 279 EAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------A--LSLGADLVLHSATK 347 (531)
Q Consensus 279 e~al~~~--~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-------~--l~~gaDivv~S~sK 347 (531)
+++++.. +.++|++|...++.|.+.|+++|.++|++||+.||+||+++.+.... . +....|+++.|++|
T Consensus 240 e~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK 319 (476)
T PLN02955 240 NSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK 319 (476)
T ss_pred HHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence 9988532 35799999999999999999999999999999999999987654311 1 11246899999999
Q ss_pred ccccCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCceE
Q 009604 348 FIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKR 422 (531)
Q Consensus 348 ~lgg~g~v~gG~iv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~L~tl---~~r~~~~~~na~~La~~L~~~p~v~~ 422 (531)
.+|.. ||++++++++++.++.... .+++.+++..+..++..++.+ ..+.++..+|.+++.+.+
T Consensus 320 A~G~~----GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~-------- 387 (476)
T PLN02955 320 AAGCH----GGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALS-------- 387 (476)
T ss_pred chhcc----CceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc--------
Confidence 99865 6899999988888875433 345555555544444455443 344455555555444311
Q ss_pred EeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcC
Q 009604 423 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 502 (531)
Q Consensus 423 V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~g 502 (531)
++.. ...++.+.+ ++...+..+.+.|...++.++ .+..|+..
T Consensus 388 ----G~~~-------------~sPI~pI~i-g~~~~a~~~~~~L~~~Gi~v~------~i~yPtVP-------------- 429 (476)
T PLN02955 388 ----GVDI-------------SSPIISLVV-GNQEKALKASRYLLKSGFHVM------AIRPPTVP-------------- 429 (476)
T ss_pred ----CCCC-------------CCCEEEEEe-CCHHHHHHHHHHHHHCCCEEE------EECCCCCC--------------
Confidence 1110 146888888 456677778888876565444 33445431
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 503 IMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 503 i~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.....|||++...++++.|+.|.++|..
T Consensus 430 ~g~~rLRi~lsA~Ht~edId~lv~~L~~ 457 (476)
T PLN02955 430 PNSCRLRVTLSAAHTTEDVKKLITALSS 457 (476)
T ss_pred CCCceEEEeeCCCCCHHHHHHHHHHHHH
Confidence 1245799999999999989998888864
No 181
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=1.3e-18 Score=181.99 Aligned_cols=260 Identities=15% Similarity=0.157 Sum_probs=170.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCCCc
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNNNV 287 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~~~t 287 (531)
++++++++++++++..++.++ .+ +.|+++.|+|+.... .++..|+++..++. .| +++.+.+.+ ++
T Consensus 71 ~~~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~-~~ 142 (354)
T PRK06358 71 LENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYER----ALKAFDAEIEYAELTEETNFAAN-EIVLEEIKE-EI 142 (354)
T ss_pred hhhEEECCCHHHHHHHHHHHh-CC-CcEEEecCChHHHHH----HHHHcCCeeEEEeCccccCCCcc-HHHHHhhcc-CC
Confidence 455555555559999998876 44 689999999986443 34455777666642 24 455556655 48
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----ccc---c-cCCcEEEECCccccccCCCce
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL---S-LGADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~l---~-~gaDivv~S~sK~lgg~g~v~ 356 (531)
++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .++ . ...-+++.|+||.++-+|.+
T Consensus 143 ~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~R- 221 (354)
T PRK06358 143 DLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLR- 221 (354)
T ss_pred CEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchh-
Confidence 99999999999999997 667888899999999999998654321 111 1 12348899999999866654
Q ss_pred EEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCc
Q 009604 357 AGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHP 432 (531)
Q Consensus 357 gG~iv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p 432 (531)
.|++++ ++.+++.+......+ ..+....+++...++ .+....+...++++.+.+.|++++++. +..|
T Consensus 222 iG~lv~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~------ 292 (354)
T PRK06358 222 LGYGLTSNKNLAEKLLQMREPW--SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIK-VYKP------ 292 (354)
T ss_pred heeeecCCHHHHHHHHHhCCCC--cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EcCC------
Confidence 677776 567778877665432 334444444444442 234444555677788888888765532 2222
Q ss_pred hhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe
Q 009604 433 EHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF 512 (531)
Q Consensus 433 ~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSv 512 (531)
.|+++++.++.. ..|.+.|...++.+..|..+. +..+++|||++
T Consensus 293 -----------~g~f~~~~~~~~----~~~~~~l~~~gI~v~~~~~f~---------------------~~~~~~iRls~ 336 (354)
T PRK06358 293 -----------SVNFIFFKLEKP----IDLRKELLKKGILIRSCSNYR---------------------GLDENYYRVAV 336 (354)
T ss_pred -----------cceEEEEEcCch----HHHHHHHHHCCeEEEECCCCC---------------------CCCCCEEEEEe
Confidence 256788888642 456666655566666654321 11357899999
Q ss_pred cC-CCHHHHHHHHHHHH
Q 009604 513 GV-EDFEDLKADVLQAL 528 (531)
Q Consensus 513 Gl-E~~edli~dL~~AL 528 (531)
|- ++.+.+++.|.+.+
T Consensus 337 ~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 337 KSREDNKKLLKALEVIL 353 (354)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 97 56677888777654
No 182
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=6.8e-19 Score=184.89 Aligned_cols=193 Identities=17% Similarity=0.154 Sum_probs=138.1
Q ss_pred EEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-----CCCHHHHHHhccCCCcEEEE
Q 009604 218 TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-----PADMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 218 ~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-----~~d~e~Le~al~~~~tklV~ 291 (531)
.|++++|+ +++.+++.+++++||.|+++.|+|..... .+...|+++..++ ..|+++++++++++++++|+
T Consensus 90 ~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~----~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~ 165 (368)
T PRK03317 90 NVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPI----IARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVF 165 (368)
T ss_pred hEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH----HHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEE
Confidence 45555555 99999999999999999999999987543 3344566665553 23789999998754589999
Q ss_pred EeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc---ccc---c-cCCcEEEECCccccccCCCceEEEEEeCh
Q 009604 292 TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KAL---S-LGADLVLHSATKFIGGHNDVLAGSISGSG 364 (531)
Q Consensus 292 lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~---~~l---~-~gaDivv~S~sK~lgg~g~v~gG~iv~~~ 364 (531)
+++|+||||.+.+.+++.++++.++++||+||+|...... ... . ....+++.|+||.+|.+|. ..|++++++
T Consensus 166 l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl-RiG~~~~~~ 244 (368)
T PRK03317 166 LTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGG-RLGYLAAAP 244 (368)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchh-hhhhhhCCH
Confidence 9999999999999999999999999999999998643211 111 1 1223788899999986653 468888999
Q ss_pred HHHHHHHHHhhhcCCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcC
Q 009604 365 KLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 365 ~li~~l~~~~~~~G~~~s~~~a~l~l~~L~---tl~~r~~~~~~na~~La~~L~~~ 417 (531)
++++.++.....+ ..++.....+...++ .+..++++..++.+.+.+.|+++
T Consensus 245 ~~~~~l~~~~~~~--~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 298 (368)
T PRK03317 245 AVVDALRLVRLPY--HLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL 298 (368)
T ss_pred HHHHHHHhcCCCC--CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9998887654322 344444444333443 33344455556666777778765
No 183
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.83 E-value=1.3e-18 Score=186.02 Aligned_cols=287 Identities=16% Similarity=0.134 Sum_probs=175.6
Q ss_pred CCCccCCC--CCCCCC--------------CCCcEEE-eCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhccc
Q 009604 200 ASFEYGRY--GNPTTV--------------GAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK 262 (531)
Q Consensus 200 ~~~~Y~R~--gnPt~~--------------g~e~~i~-~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~ 262 (531)
.++.|+|+ |+|+.. |.+++++ ++||+.|+.+++.++++|||+|+++...|++... ..++.
T Consensus 58 ~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~---~g~~~ 134 (416)
T PRK13034 58 EGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLT---HGAKV 134 (416)
T ss_pred CCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeee---cCCcc
Confidence 34566776 666654 7788865 5899999999999999999999999999987321 10110
Q ss_pred --CCcEE--EEeCC------CCHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc--
Q 009604 263 --MGITA--TVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-- 330 (531)
Q Consensus 263 --~Gi~v--~~vd~------~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-- 330 (531)
.+... ..++. .|++++++.++..++|+|+++.+. +|...|+++|.++|+++|++|++|++++.+..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~ 212 (416)
T PRK13034 135 SLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFARFREIADEVGALLMVDMAHIAGLVAA 212 (416)
T ss_pred eeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHHHHHHHHHcCCEEEEeCcccccCccc
Confidence 11111 22332 588999988854458999986654 57888999999999999999999999665432
Q ss_pred ---ccccccCCcEEEECCccccccCCCceEEEEEeChHH-HHHHHHHhhh--cCCCchHHHHHHHHHHHHHH----HHHH
Q 009604 331 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHV--LGGALNPNAAYLIIRGMKTL----HLRV 400 (531)
Q Consensus 331 ---~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l-i~~l~~~~~~--~G~~~s~~~a~l~l~~L~tl----~~r~ 400 (531)
..++. ++|++++|++|+++|+. ||+++++++. .++++..... .+....+..+.+....++.+ ..+.
T Consensus 213 g~~~~~~~-~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~ 288 (416)
T PRK13034 213 GEHPNPFP-HAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYA 288 (416)
T ss_pred CCCCCCCC-CceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHH
Confidence 22333 58999999999997765 6887776544 4444443211 11222333333332222222 2345
Q ss_pred HHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCccc
Q 009604 401 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCES 480 (531)
Q Consensus 401 ~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~S 480 (531)
++..+|++++++.|++. ++..+ .++ + -.+++.+.+.........+.+.|+..++-++.=..-.
T Consensus 289 ~~l~~~a~~l~~~L~~~-G~~~~-~~~--~-------------~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~ 351 (416)
T PRK13034 289 KQVIANAQALAEVLKER-GYDLV-SGG--T-------------DNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPG 351 (416)
T ss_pred HHHHHHHHHHHHHHHHc-CCEec-cCC--C-------------CCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCC
Confidence 77788999999999876 44221 111 1 1346677765322233444455554454443210000
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHH
Q 009604 481 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 529 (531)
Q Consensus 481 li~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl----E~~edli~dL~~AL~ 529 (531)
-+..|. + +..||+|+.. ...++.++.+.++|+
T Consensus 352 ~~~~p~----------------~-~~~lR~~~~~~t~~~~~~~di~~l~~~l~ 387 (416)
T PRK13034 352 DTESPF----------------V-TSGIRIGTPAGTTRGFGEAEFREIANWIL 387 (416)
T ss_pred CCcCCC----------------C-CCeeEeCcHHHHhCCCCHHHHHHHHHHHH
Confidence 001110 1 4579999876 444555666655554
No 184
>PRK03321 putative aminotransferase; Provisional
Probab=99.83 E-value=4.1e-19 Score=185.27 Aligned_cols=257 Identities=17% Similarity=0.197 Sum_probs=174.5
Q ss_pred cEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCCCcEEE
Q 009604 217 STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLF 290 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~tklV 290 (531)
+.|++++|+ +++..++..++++||+|+++.+.|.... ..++..|+++..++.+ |++++++++++ ++++|
T Consensus 75 ~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~-~~~~v 149 (352)
T PRK03321 75 EHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYP----ILVQVAGATPVQVPLTPDHTHDLDAMAAAITD-RTRLI 149 (352)
T ss_pred HHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHH----HHHHHcCCEEEEccCCCCCCCCHHHHHHhhcc-CCCEE
Confidence 355666776 7788888888999999999999886533 2344567877777643 68999999977 49999
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHh--cCCEEEEeCCCCCCccc----ccc---c-cCCcEEEECCccccccCCCceEEEE
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL---S-LGADLVLHSATKFIGGHNDVLAGSI 360 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~--~gi~lIvD~a~a~~~~~----~~l---~-~gaDivv~S~sK~lgg~g~v~gG~i 360 (531)
++++|+||||.++|.++|.++|+. +|+++|+|++|...... .++ . ..-.+++.|+||.++..| ...|++
T Consensus 150 ~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~ 228 (352)
T PRK03321 150 FVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAG-LRVGYA 228 (352)
T ss_pred EEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHH-Hhhhhh
Confidence 999999999999999999999987 59999999997643221 111 1 123478899999998555 347888
Q ss_pred EeChHHHHHHHHHhhhcCCCchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhh
Q 009604 361 SGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIA 437 (531)
Q Consensus 361 v~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~---L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~ 437 (531)
++++++++.+...... ...+......+... .+.+..++++..++...+.+.|++. ++. + .|
T Consensus 229 v~~~~~~~~~~~~~~~--~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~-~-~~----------- 292 (352)
T PRK03321 229 VGHPEVIAALRKVAVP--FSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWT-V-PP----------- 292 (352)
T ss_pred cCCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CC-----------
Confidence 8999999888765432 23344433322222 3444555555556666777777764 221 1 11
Q ss_pred hhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC-CC
Q 009604 438 TQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV-ED 516 (531)
Q Consensus 438 ~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl-E~ 516 (531)
..|+++++.++. ...+|.+.|+..++.+.. + .+..|||+++. ++
T Consensus 293 -----~~g~~i~i~l~~---~~~~~~~~l~~~gI~v~~--~-------------------------~~~~iRi~~~~~~~ 337 (352)
T PRK03321 293 -----SQANFVWLPLGE---RTADFAAAAAEAGVVVRP--F-------------------------AGEGVRVTIGAPEE 337 (352)
T ss_pred -----CCCCEEEEeCCC---CHHHHHHHHHHCCEEEEc--c-------------------------CCCcEEEeeCCHHH
Confidence 135678888743 245677777555544321 0 12359999986 45
Q ss_pred HHHHHHHHHHHHHh
Q 009604 517 FEDLKADVLQALHA 530 (531)
Q Consensus 517 ~edli~dL~~AL~~ 530 (531)
.+.+++.|+++++-
T Consensus 338 ~~~~~~al~~~~~~ 351 (352)
T PRK03321 338 NDAFLRAARAWRAG 351 (352)
T ss_pred HHHHHHHHHHHhcc
Confidence 67788888887653
No 185
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.83 E-value=2.5e-18 Score=182.64 Aligned_cols=268 Identities=17% Similarity=0.187 Sum_probs=179.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcc---------CC-CEEEEcCCCccchH-HHHH--------hhcccCCcEEEEeCCCC
Q 009604 214 GAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTR-IFIE--------TVLPKMGITATVIDPAD 274 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~---------pG-D~VIv~~~~y~~t~-~~~~--------~~l~~~Gi~v~~vd~~d 274 (531)
+.+.+++++||++|+..+++.+.. +| ++|++....|++.. ..+. ..+......+.+++..|
T Consensus 97 ~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 176 (401)
T PRK00854 97 GSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGD 176 (401)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCC
Confidence 456899999999999999987742 23 57777776666643 2221 00122234566778889
Q ss_pred HHHHHHhccCCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcccc-------ccccCCcEEEE
Q 009604 275 MEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQK-------ALSLGADLVLH 343 (531)
Q Consensus 275 ~e~Le~al~~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~~~-------~l~~gaDivv~ 343 (531)
+++|++++.+ ++++|++|+|+||+|.+.+ +++|.++|++||+++|+||++. ++... ......|+++.
T Consensus 177 ~~~le~~i~~-~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~ 254 (401)
T PRK00854 177 AEALEAAITP-NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLI 254 (401)
T ss_pred HHHHHHHhCC-CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEe
Confidence 9999999987 4999999999999999987 9999999999999999999985 22211 12234688875
Q ss_pred CCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCce
Q 009604 344 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVK 421 (531)
Q Consensus 344 S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~p~v~ 421 (531)
+|.+++.. ..+|++++++++++.+...........++..++.++..|+.+.. ..++..++.+.+.+.|++....
T Consensus 255 --~K~l~gg~-~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~~- 330 (401)
T PRK00854 255 --GKALSGGF-YPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRSN- 330 (401)
T ss_pred --cccccCCc-cCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhccC-
Confidence 59998654 34688889998887765322211122467777777777777654 3455556667777777654210
Q ss_pred EEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhc
Q 009604 422 RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKY 501 (531)
Q Consensus 422 ~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~ 501 (531)
.+ ...++.|.++.|.+.++......|.+.|...++.++.
T Consensus 331 ~~---------------~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~-------------------------- 369 (401)
T PRK00854 331 IV---------------REVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKD-------------------------- 369 (401)
T ss_pred ce---------------EEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEec--------------------------
Confidence 00 1113467888888754333556788887654443320
Q ss_pred CCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 502 GIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 502 gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
...+.|||+..+..+++.|+.+.++|+
T Consensus 370 -~~~~~lR~~p~~~~t~e~i~~~i~~l~ 396 (401)
T PRK00854 370 -THDHTIRLAPPLVITREQVDWALEQIA 396 (401)
T ss_pred -CCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 013689999887766666666666554
No 186
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=1.3e-18 Score=180.82 Aligned_cols=249 Identities=17% Similarity=0.180 Sum_probs=161.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCcEE
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNVSL 289 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tkl 289 (531)
.+++++++++++++..++..+ +||+|+++.|.|.... ...+..|+++..++. .|++++++.+ + ++++
T Consensus 72 ~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~-~~~~ 143 (337)
T PRK03967 72 AENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYS----FYAKLNGIPVIDVPLKEDFTIDGERIAEKA-K-NASA 143 (337)
T ss_pred cceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHH----HHHHHcCCeEEEeecCCCCCcCHHHHHHhc-c-CCCE
Confidence 444444444458888877665 7999999999997432 234556888777653 3678888765 3 3889
Q ss_pred EEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccc---cc-cCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 290 FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---LS-LGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 290 V~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~---l~-~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
|++++|+||||.+++.++|.++++ +++++|+|++|........ .. ..--+++.|+||.++.+|. ..|+++++++
T Consensus 144 v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~Gl-RiG~iv~~~~ 221 (337)
T PRK03967 144 VFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGI-RAGYAIANEE 221 (337)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhh-hheeeecCHH
Confidence 999999999999999999999995 6999999999864322111 11 1234888999999986664 4788889999
Q ss_pred HHHHHHHHhhhcCCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcC
Q 009604 366 LVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT 442 (531)
Q Consensus 366 li~~l~~~~~~~G~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~ 442 (531)
+++.++.....++ .+.....++...+ +.+..+++...+++..+.+.|.++ .+|.
T Consensus 222 ~i~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~--------------- 278 (337)
T PRK03967 222 IIDALYRIKPPFS--LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY------AYPS--------------- 278 (337)
T ss_pred HHHHHHhhcCCCC--CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC------cCCC---------------
Confidence 9888877654333 3343333333333 333344445556666677777643 1221
Q ss_pred CcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC-CCHHHHH
Q 009604 443 GFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV-EDFEDLK 521 (531)
Q Consensus 443 g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl-E~~edli 521 (531)
.+..+++.++ +.+.|...++.+..++ +..++.+||++|. ++.+.++
T Consensus 279 -~~~~~~~~~~--------~~~~l~~~gi~v~~~~------------------------~~~~~~~Ri~~~~~~~~~~l~ 325 (337)
T PRK03967 279 -DANFLLLKLD--------AYDYLLENGIVVRKLS------------------------GRLEGHIRVTVGKREENDEFI 325 (337)
T ss_pred -CCcEEEEhHH--------HHHHHHHCCEEEEeCC------------------------CCCCCeEEEecCCHHHHHHHH
Confidence 3556666552 2333333344443211 0125689999997 4567777
Q ss_pred HHHHHHHH
Q 009604 522 ADVLQALH 529 (531)
Q Consensus 522 ~dL~~AL~ 529 (531)
+.|.+.++
T Consensus 326 ~~l~~~~~ 333 (337)
T PRK03967 326 KALKEIKE 333 (337)
T ss_pred HHHHHHHH
Confidence 77777654
No 187
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.82 E-value=6.7e-18 Score=175.29 Aligned_cols=271 Identities=16% Similarity=0.143 Sum_probs=178.5
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCC-CcEEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN-NVSLF 290 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~-~tklV 290 (531)
.++++++|++++..++.+++++||++++..+.+.+.. +...++..|+++..++. .|+++++++++++ ++++|
T Consensus 52 ~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v 129 (355)
T TIGR03301 52 CVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHV 129 (355)
T ss_pred EEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEE
Confidence 4667889999999999999988888666555443321 22344556887776653 3789999998642 36788
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHH
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ 369 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~ 369 (531)
++.+++|++|.+.|+++|.++|+++|+++|+|++++.+. ..+...+++|+++.|++|+++|+.+ .|++++++++++.
T Consensus 130 ~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~ 207 (355)
T TIGR03301 130 ATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPG--FGFVIARRDLLEA 207 (355)
T ss_pred EEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcccccCCc--eeEEEECHHHHHH
Confidence 888999999999999999999999999999999865442 2334456899999999999865432 4899999988877
Q ss_pred HHHHh---------------h--hcCCCchHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 370 IRNLH---------------H--VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 370 l~~~~---------------~--~~G~~~s~~~a~l~l~~L~t------l~~r~~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
+.... . ....+.+....+.+...++. +..+.++..++++.+.+.|+++ +++ +..|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~-~~~~ 285 (355)
T TIGR03301 208 SAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQ-PLLP 285 (355)
T ss_pred hhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCe-eecC
Confidence 65200 0 00112333332332333332 3445566677788888888765 332 2222
Q ss_pred CCCCCchhhhhhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCC
Q 009604 427 GLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 505 (531)
Q Consensus 427 gl~s~p~~~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~ 505 (531)
. . ...+.+++|.++.. .....++.+.|+..++.++.|+.. ..
T Consensus 286 ~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~------------------------~~ 328 (355)
T TIGR03301 286 E--R-----------WQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLT------------------------LA 328 (355)
T ss_pred C--C-----------CCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccc------------------------cc
Confidence 1 0 01234678888642 123456777776556555544210 12
Q ss_pred CeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 506 NLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 506 ~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+.|||++...++++.++.+.++|++
T Consensus 329 ~~iRis~~~~~~~~~i~~~~~~l~~ 353 (355)
T TIGR03301 329 DTFRIGTIGEIDAADIERLLEAIKD 353 (355)
T ss_pred cEEEEecCCCCCHHHHHHHHHHHHh
Confidence 5799998666677777777777764
No 188
>PRK05839 hypothetical protein; Provisional
Probab=99.82 E-value=2.6e-18 Score=181.14 Aligned_cols=250 Identities=18% Similarity=0.119 Sum_probs=153.0
Q ss_pred cEEEeCCh-HHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCCCcE
Q 009604 217 STVIMASG-MSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVS 288 (531)
Q Consensus 217 ~~i~~sSG-~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~tk 288 (531)
+.|++++| .+++..++..++ ++||.|+++.|.|..... .+...|+++..++.+ +++..+..+ + ++|
T Consensus 84 ~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~~g~~v~~v~~~~~~~~~~d~~~~~~-~-~~k 157 (374)
T PRK05839 84 NELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEG----AAIASRAKVLLMPLTKENDFTPSLNEKEL-Q-EVD 157 (374)
T ss_pred ceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHH----HHHhcCCEEEEeecccccCCcCCcchhhh-c-ccc
Confidence 34455555 589988888764 579999999999987543 345568888777542 122222223 3 489
Q ss_pred EEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----ccc---------ccCCcEEEECCccccccC
Q 009604 289 LFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL---------SLGADLVLHSATKFIGGH 352 (531)
Q Consensus 289 lV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~l---------~~gaDivv~S~sK~lgg~ 352 (531)
+|++++|+||||.+++ +++|+++|+++|++||+||+|...... ... ..+.-+++.|+||.++.+
T Consensus 158 ~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 237 (374)
T PRK05839 158 LVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAP 237 (374)
T ss_pred EEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCc
Confidence 9999999999999997 556777789999999999998753211 111 112348899999998877
Q ss_pred CCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCC
Q 009604 353 NDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 429 (531)
Q Consensus 353 g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~ 429 (531)
|. ..|++++++++++.++......+...+......+...+ +.+....++..++.+.+.+.| ++ ..|
T Consensus 238 Gl-RiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----~~---~~p--- 306 (374)
T PRK05839 238 GL-RSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----GI---TIP--- 306 (374)
T ss_pred cc-eeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----CC---CCC---
Confidence 74 47888889888888877654433333333222222222 222222333334444444433 11 112
Q ss_pred CCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009604 430 SHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 508 (531)
Q Consensus 430 s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~-~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lI 508 (531)
..|..+++.++.. ..|.+.|. ..++.+..|..+.. .+..++++
T Consensus 307 -------------~gg~fi~~~~~~~----~~~~~~l~~~~gi~v~pg~~f~~-------------------~~~~~~~i 350 (374)
T PRK05839 307 -------------PATFYVWLPVDND----EEFTKKLYQNEGIKVLPGSFLGR-------------------NGIGKGYV 350 (374)
T ss_pred -------------CeeEEEEEeCCCh----HHHHHHHHHHCCEEEeCchhhCC-------------------CCCCCCeE
Confidence 1467888888632 34555552 35666666643210 01235899
Q ss_pred EEEecCCCHHHH
Q 009604 509 RFSFGVEDFEDL 520 (531)
Q Consensus 509 RlSvGlE~~edl 520 (531)
|||++. +.+++
T Consensus 351 Ris~~~-~~~~~ 361 (374)
T PRK05839 351 RIALVY-DTPKL 361 (374)
T ss_pred EEEecC-CHHHH
Confidence 999986 34443
No 189
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.82 E-value=4.6e-18 Score=185.41 Aligned_cols=270 Identities=13% Similarity=0.169 Sum_probs=164.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhcc---
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALN--- 283 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~--- 283 (531)
.++++++++++++|+.+++.++++|||.|+++.|.|.+....+. ...|+++..++. .|+++++++++
T Consensus 118 ~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~---~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~ 194 (496)
T PLN02376 118 DPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLR---WRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQ 194 (496)
T ss_pred ChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHH---hhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHH
Confidence 34566666555699999999999999999999999998653321 135777777654 25777765532
Q ss_pred --CCCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc----c-ccccc---------CCc--EEE
Q 009604 284 --NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----Q-KALSL---------GAD--LVL 342 (531)
Q Consensus 284 --~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~----~-~~l~~---------gaD--ivv 342 (531)
..++|+|++++|+||||.+++ +++|+++|+++|++||+||+|+.... . ....+ ..+ +++
T Consensus 195 ~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv 274 (496)
T PLN02376 195 ESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIV 274 (496)
T ss_pred hcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEE
Confidence 125899999999999999998 55677889999999999999875321 1 10001 112 457
Q ss_pred ECCccccccCCCceEEEEEeC-hHHHHHHHHHhhhcCCCchHHHHHHHHHHHHH---HHH----HHHHHHHHHHHHHHHH
Q 009604 343 HSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHL----RVQQQNSTALRMAKIL 414 (531)
Q Consensus 343 ~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~t---l~~----r~~~~~~na~~La~~L 414 (531)
.|+||.+|.+|.+ .|++++. +.+.+.++... .++. .+....+++...++. +.. ..++..+..+.+.+.|
T Consensus 275 ~S~SK~~glpGlR-vG~li~~~~~l~~~~~~~~-~~~~-vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L 351 (496)
T PLN02376 275 YSLSKDMGLPGFR-VGIVYSFNDSVVSCARKMS-SFGL-VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGI 351 (496)
T ss_pred EeccccCCCCcce-EEEEEECCHHHHHHHHHHh-hcCC-CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999877654 6788874 55555544333 2332 344444433333321 111 1233344555666777
Q ss_pred HcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCH------HHHHHHHHHc-CCCCcccccCCcccccccCcc
Q 009604 415 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL------TATIKFIDAL-KIPYIAPSFGGCESIVDQPAI 487 (531)
Q Consensus 415 ~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~------~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~ 487 (531)
+++ ++. + .+. ..|.++++.++... +...+|.+.| +..++.++.|..+..
T Consensus 352 ~~~-gi~-~-~~~---------------~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~------ 407 (496)
T PLN02376 352 KKA-DIA-C-LTS---------------NAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRC------ 407 (496)
T ss_pred HHC-CCc-c-cCC---------------CceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCC------
Confidence 654 221 1 111 14678888885311 1224455544 335777777754310
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH---HHHHHHHH
Q 009604 488 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL---KADVLQAL 528 (531)
Q Consensus 488 ~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edl---i~dL~~AL 528 (531)
-.++++||+++..+.+.+ ++.|.+++
T Consensus 408 ---------------~~~g~~Ri~fa~~~~~~l~~al~rl~~~l 436 (496)
T PLN02376 408 ---------------TEPGWFRICFANMDDDTLHVALGRIQDFV 436 (496)
T ss_pred ---------------CCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 025799999996443444 44444444
No 190
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.82 E-value=2.7e-18 Score=182.23 Aligned_cols=235 Identities=20% Similarity=0.178 Sum_probs=153.7
Q ss_pred EEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHH-hhcccCCcEEEEe--CC------CCHHHHHHhccCCCcE
Q 009604 218 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-TVLPKMGITATVI--DP------ADMEGLEAALNNNNVS 288 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~-~~l~~~Gi~v~~v--d~------~d~e~Le~al~~~~tk 288 (531)
.++++||++|+.+++.++++|||+|+++.+.|.+...... ..++..|.++..+ +. .|++++++++++.+++
T Consensus 84 ~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~ 163 (402)
T cd00378 84 NVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPK 163 (402)
T ss_pred eeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCC
Confidence 4666789999999999999999999999999976543211 1144456554433 22 2899999998643589
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-----ccccccCCcEEEECCccccccCCCceEEEEEeC
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGS 363 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~ 363 (531)
+|++++|+|| ...|+++|.++|+++|++||+|+++..+.. ..++. ++|+++.|+||+++|+. +|+++++
T Consensus 164 ~v~~~~~~~~--~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l~G~~---gg~i~~~ 237 (402)
T cd00378 164 LIVAGASAYP--RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTLRGPR---GGLILTR 237 (402)
T ss_pred EEEecCcccC--CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEeccccCCCCCC---ceEEEec
Confidence 9999888765 567999999999999999999999644321 22334 68999999999996553 6777777
Q ss_pred h-HHHHHHHHHhhh--cCCCchHHHHH--H-HHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhh
Q 009604 364 G-KLVTQIRNLHHV--LGGALNPNAAY--L-IIRGMK-TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHI 436 (531)
Q Consensus 364 ~-~li~~l~~~~~~--~G~~~s~~~a~--l-~l~~L~-tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l 436 (531)
+ ++++.++..... .+.......+. . +...++ ....++++..++++.+.+.|.++ ++..+..|.
T Consensus 238 ~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--------- 307 (402)
T cd00378 238 KGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGT--------- 307 (402)
T ss_pred cHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCC---------
Confidence 6 888887654321 22211111111 1 111222 34556677888899999999876 443221111
Q ss_pred hhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCccccc
Q 009604 437 ATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 475 (531)
Q Consensus 437 ~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~ 475 (531)
.++++++.++........+.+.|+..++.+..
T Consensus 308 -------~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~ 339 (402)
T cd00378 308 -------DNHLVLVDLRPKGITGKAAEDALEEAGITVNK 339 (402)
T ss_pred -------CCeEEEEeCCccCCCHHHHHHHHHHcCcEEcC
Confidence 25678888863111233445555555555543
No 191
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.82 E-value=5.5e-18 Score=182.69 Aligned_cols=271 Identities=14% Similarity=0.143 Sum_probs=170.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccC--
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN-- 284 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~-- 284 (531)
.++++++++++++|+.+++.+++.|||.|+++.|.|++....+. .+.|+++..++. .|++++++++++
T Consensus 119 ~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~---~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~ 195 (447)
T PLN02607 119 DPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAE 195 (447)
T ss_pred CHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH---hcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHH
Confidence 45566665555699999999999999999999999988654332 134666666542 367889888763
Q ss_pred ---CCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----ccc----cc------CCcEEEE
Q 009604 285 ---NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL----SL------GADLVLH 343 (531)
Q Consensus 285 ---~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l----~~------gaDivv~ 343 (531)
.++|+|++++|+||||.+++ +++|.++|+++|+.||+||+|+..... ..+ .. ..-+++.
T Consensus 196 ~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~ 275 (447)
T PLN02607 196 AANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVY 275 (447)
T ss_pred HhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEE
Confidence 25899999999999999997 668888899999999999998642211 111 01 1237889
Q ss_pred CCccccccCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
Q 009604 344 SATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-------TLHLRVQQQNSTALRMAKILE 415 (531)
Q Consensus 344 S~sK~lgg~g~v~gG~iv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~-------tl~~r~~~~~~na~~La~~L~ 415 (531)
|+||.||..|-+ .|++++ ++++++.++.... ++. .+.....++...|+ .+....++..++.+.+.+.|+
T Consensus 276 s~SK~fg~~GlR-vG~ivs~n~~l~~~~~~~~~-~~~-~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~ 352 (447)
T PLN02607 276 SLSKDLGLPGFR-VGTIYSYNDKVVTTARRMSS-FTL-VSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLR 352 (447)
T ss_pred cchhcCCCCcce-EEEEEEcCHHHHHHHHHHhh-cCC-CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999877754 678877 6667666655432 221 23322232222222 122223444556677778888
Q ss_pred cCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-----HHHHHHHHHHc-CCCCcccccCCcccccccCcccc
Q 009604 416 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMS 489 (531)
Q Consensus 416 ~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-----~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s 489 (531)
++ ++. + .+ ...|.++++.++.. .+...++.+.+ +..++.+..|..+. .
T Consensus 353 ~~-gi~-~-~~---------------~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~----~---- 406 (447)
T PLN02607 353 RA-GIE-C-LK---------------GNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCH----C---- 406 (447)
T ss_pred hC-CCC-c-cc---------------CCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccC----C----
Confidence 65 332 1 11 11466888888531 12223455444 44566677664321 0
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHH
Q 009604 490 YWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 529 (531)
Q Consensus 490 ~~~~~~~~~~~~gi~~~lIRlSvGlE~~---edli~dL~~AL~ 529 (531)
-.++++||+++..+. ++-+++|.++|+
T Consensus 407 -------------~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~ 436 (447)
T PLN02607 407 -------------SEPGWFRVCFANMSEDTLEVALKRIHRFMD 436 (447)
T ss_pred -------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 126899999996433 445555555554
No 192
>PRK10534 L-threonine aldolase; Provisional
Probab=99.82 E-value=5.2e-18 Score=175.57 Aligned_cols=233 Identities=14% Similarity=0.161 Sum_probs=155.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccC-CcEEEEeCC-----CCHHHHHHhccCC--
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM-GITATVIDP-----ADMEGLEAALNNN-- 285 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~-Gi~v~~vd~-----~d~e~Le~al~~~-- 285 (531)
|.+.++++++|++++.+++.+++.+||+|+++.+.|...+... ..... ++++..++. .|+++|+++++++
T Consensus 48 g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 125 (333)
T PRK10534 48 GKEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEAG--GAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDI 125 (333)
T ss_pred CCCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcCC--chHHhcCceEEeecCCCCCCCCHHHHHHhhcccCc
Confidence 7788899999999999988889999999998877774333110 01112 245444432 3789999998652
Q ss_pred ---CcEEEEEeCCCCCCCcccCHHH---HHHHHHhcCCEEEEeCCCCCCc------cccccccCCcEEEECCccccccCC
Q 009604 286 ---NVSLFFTESPTNPFLRCVDVKL---VSDLCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHN 353 (531)
Q Consensus 286 ---~tklV~lesP~NPtG~v~dl~~---I~~la~~~gi~lIvD~a~a~~~------~~~~l~~gaDivv~S~sK~lgg~g 353 (531)
++++|++++|+ +|.+.+.++ |.++|+++|++|++||+|.... .........|.++.|+||.++..
T Consensus 126 ~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~- 202 (333)
T PRK10534 126 HFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP- 202 (333)
T ss_pred CcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc-
Confidence 48999999876 499988665 4567889999999999854211 01111123576677999988753
Q ss_pred CceEEEEEeChHHHHHHHHHhhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCC
Q 009604 354 DVLAGSISGSGKLVTQIRNLHHVLGGALN--PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSH 431 (531)
Q Consensus 354 ~v~gG~iv~~~~li~~l~~~~~~~G~~~s--~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~ 431 (531)
+||++++++++++.++.....++..++ ...+..+...++....++++..++++++.+.|+++ ++. + +|.
T Consensus 203 --~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~~~---- 273 (333)
T PRK10534 203 --VGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQLREA-GAD-V-MRQ---- 273 (333)
T ss_pred --ccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC-CCc-c-CCC----
Confidence 466888999999999877765554332 23334444455554466666667788899999875 331 2 221
Q ss_pred chhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccc
Q 009604 432 PEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 474 (531)
Q Consensus 432 p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS 474 (531)
.++++.+.+++ .....+.+.|+..++.+.
T Consensus 274 ------------~~nfv~~~~~~--~~~~~~~~~l~~~gi~v~ 302 (333)
T PRK10534 274 ------------DTNMLFVRVGE--EQAAALGEYMRERNVLIN 302 (333)
T ss_pred ------------CceEEEEECCc--hhHHHHHHHHHHcCeeec
Confidence 25788888853 234566667766565554
No 193
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.82 E-value=5.9e-18 Score=179.17 Aligned_cols=269 Identities=17% Similarity=0.107 Sum_probs=174.0
Q ss_pred cEEEeCChH-HHHHHHHHHhccC--CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCCCcE
Q 009604 217 STVIMASGM-SASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVS 288 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~p--GD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~tk 288 (531)
+++++++|+ +++..++.+++.+ ||+|+++.+.|+.+...+....+..|+++..++.. |+++|+++++++ |+
T Consensus 83 ~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-t~ 161 (398)
T cd00613 83 NASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEE-VA 161 (398)
T ss_pred ceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCC-eE
Confidence 566777676 4444555555666 99999999999988766654445667888777643 679999999874 99
Q ss_pred EEEEeCCCCCCCcccCH-HHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccC--CCceEEEEEeCh
Q 009604 289 LFFTESPTNPFLRCVDV-KLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGH--NDVLAGSISGSG 364 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl-~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~--g~v~gG~iv~~~ 364 (531)
+|++++|+ ++|.+.|+ ++|.++|+++|+++|+|++++.+ ...++..+++|+++.|+||++.+. |...+|+++.++
T Consensus 162 ~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~ 240 (398)
T cd00613 162 ALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKK 240 (398)
T ss_pred EEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccccCCCCCCCCCceeEEEEhh
Confidence 99999985 89999985 99999999999999999987543 334455678999999999998432 123378888888
Q ss_pred HHHHHHHHH-------------------------hhhcCC--Cc--hH---HHHHHHHHH--HHHHHHHHHHHHHHHHHH
Q 009604 365 KLVTQIRNL-------------------------HHVLGG--AL--NP---NAAYLIIRG--MKTLHLRVQQQNSTALRM 410 (531)
Q Consensus 365 ~li~~l~~~-------------------------~~~~G~--~~--s~---~~a~l~l~~--L~tl~~r~~~~~~na~~L 410 (531)
++++.+... +...|. .. .+ ..++..+.. -+.+....++..++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l 320 (398)
T cd00613 241 ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYL 320 (398)
T ss_pred hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 777654110 000010 01 11 112221111 122333445666777778
Q ss_pred HHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCCcccccCCcccccccCcccc
Q 009604 411 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 489 (531)
Q Consensus 411 a~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s 489 (531)
.+.|++.+... .+. . ...+++.|.++.. .....++.+.|...++.+.. . .|
T Consensus 321 ~~~L~~~~~~~---~~~---~-----------~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~------~-~~---- 372 (398)
T cd00613 321 AKRLKEVGGVL---PFN---G-----------PFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPT------M-YL---- 372 (398)
T ss_pred HHHHHhcCCcc---cCC---C-----------CeeEEEEEEcCCcchHHHHHHHHhhhhcCccccc------c-cc----
Confidence 88887765421 111 0 1224567777641 23566777777544332110 0 00
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009604 490 YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 528 (531)
Q Consensus 490 ~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL 528 (531)
...+.||+|+.+.++++.|+.+.++|
T Consensus 373 -------------~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 373 -------------PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred -------------CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 02468999999999999999988764
No 194
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.82 E-value=4.2e-18 Score=178.45 Aligned_cols=262 Identities=15% Similarity=0.091 Sum_probs=169.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----------CHHHHHHhccC
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----------DMEGLEAALNN 284 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----------d~e~Le~al~~ 284 (531)
.++++++++++++|.+++.++. +||.|+++.|+|..... .++..|+++..++.+ +++++++.. +
T Consensus 74 ~~~I~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 147 (360)
T PRK07392 74 PEWILPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRR----ALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-T 147 (360)
T ss_pred hhhEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHH----HHHHcCCeEEEEecccccCCcccccCHHHHHHhc-c
Confidence 4455555555599999988764 68999999999987553 344567777665432 355555443 3
Q ss_pred CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc----cc---cc-cCCcEEEECCccccccCCCce
Q 009604 285 NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KA---LS-LGADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 285 ~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~----~~---l~-~gaDivv~S~sK~lgg~g~v~ 356 (531)
+++++++++|+||||.+++.++|.++++++++ +|+||+|...... .. +. ...-+++.|+||.++-+|.+
T Consensus 148 -~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlR- 224 (360)
T PRK07392 148 -PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLR- 224 (360)
T ss_pred -CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchh-
Confidence 47999999999999999999999999999985 6679998654211 11 11 12348899999999866644
Q ss_pred EEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCch
Q 009604 357 AGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 433 (531)
Q Consensus 357 gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~t---l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~ 433 (531)
.|++++++++++.+...... ...+....+++...++. .....+...++++.+.+.|++++++. + +|+
T Consensus 225 iG~~v~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~------ 294 (360)
T PRK07392 225 LGYAIAHPDRLQRWQQWRDP--WPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLT-P-LPS------ 294 (360)
T ss_pred eeeeeCCHHHHHHHHhhCCC--CCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCC------
Confidence 78888888888887655432 23444444444444432 11122334566777888887765542 1 221
Q ss_pred hhhhhhhcCCcccEEEEEEcCCHHHHHHHHHH-cCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe
Q 009604 434 HHIATQQMTGFGGVVSFEVDGDLTATIKFIDA-LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF 512 (531)
Q Consensus 434 ~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~-L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSv 512 (531)
.++++++.++. ...+|.+. ++..++.+..|..+. +..+++|||++
T Consensus 295 ----------~~~fl~~~~~~---~~~~l~~~ll~~~gv~v~pg~~f~---------------------~~~~~~iRi~~ 340 (360)
T PRK07392 295 ----------AANFLLVQSQG---SALQLQEKLLQQHRILIRDCLSFP---------------------ELGDRYFRVAV 340 (360)
T ss_pred ----------CCCEEEEEcCC---CHHHHHHHHHhhCCEEEEeCCCCC---------------------CCCCCEEEEEe
Confidence 35677777753 23455555 344566666663321 01257999999
Q ss_pred cCCC-HHHHHHHHHHHHH
Q 009604 513 GVED-FEDLKADVLQALH 529 (531)
Q Consensus 513 GlE~-~edli~dL~~AL~ 529 (531)
|..+ .+++++.|++.+.
T Consensus 341 ~~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 341 RTEAENQRLLEALAAILA 358 (360)
T ss_pred CCHHHHHHHHHHHHHHhh
Confidence 9854 5677777766543
No 195
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.82 E-value=8.7e-18 Score=176.21 Aligned_cols=262 Identities=14% Similarity=0.063 Sum_probs=174.1
Q ss_pred CcEEEeCChHHHHHHHHHHhc------cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccC
Q 009604 216 ESTVIMASGMSASTVMLLALV------PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNN 284 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all------~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~ 284 (531)
+..+++++|++++..++.++. ++||+|+++.+.|.+.. ..++..|+++..++. .|+++|++++++
T Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~----~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~ 152 (373)
T TIGR03812 77 AYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFE----KAAEMLGLELRYAPLDEDYTVDVKDVEDLIDD 152 (373)
T ss_pred CCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHH----HHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhh
Confidence 356788888888888776653 47799999999887633 345566888887764 379999999987
Q ss_pred CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-----------ccccccCCcEEEECCccccccCC
Q 009604 285 NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----------QKALSLGADLVLHSATKFIGGHN 353 (531)
Q Consensus 285 ~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-----------~~~l~~gaDivv~S~sK~lgg~g 353 (531)
+ +..|++.+|+||+|.+.|+++|.++|+++|+++|+|++|+.+.. .+....|+|.+..|.+|+..++.
T Consensus 153 ~-~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~ 231 (373)
T TIGR03812 153 N-TIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPI 231 (373)
T ss_pred C-cEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcC
Confidence 5 64444445899999999999999999999999999999864321 11112378999999999754332
Q ss_pred CceEEEEEeChHHHHHHHHHhhh-cC-------CCchHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHcCCCc
Q 009604 354 DVLAGSISGSGKLVTQIRNLHHV-LG-------GALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 354 ~v~gG~iv~~~~li~~l~~~~~~-~G-------~~~s~~~a~l~l~~L~-----tl~~r~~~~~~na~~La~~L~~~p~v 420 (531)
..||+++.++++++.++..... .+ ++.+......+...++ .+..+.++..++++++.+.|++.+.
T Consensus 232 -~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~- 309 (373)
T TIGR03812 232 -PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGF- 309 (373)
T ss_pred -CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCC-
Confidence 2356777788877766421111 11 1122222222222333 2344567777888888888887642
Q ss_pred eEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHh
Q 009604 421 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 500 (531)
Q Consensus 421 ~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~ 500 (531)
..+ ++. ..+++.|.+++. ..+.+.|...++.++.+.
T Consensus 310 ~~~-~~~----------------~~~~v~~~~~~~----~~v~~~L~~~gi~v~~~~----------------------- 345 (373)
T TIGR03812 310 EPV-IEP----------------VLNIVAFEVDDP----EEVRKKLRDRGWYVSVTR----------------------- 345 (373)
T ss_pred eEE-cCC----------------CceEEEEEeCCH----HHHHHHHHHCCceeccCC-----------------------
Confidence 112 211 246788888642 245555544444433210
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 501 YGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
.++.||+|++..++++.++.+.++|++|
T Consensus 346 ---~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 346 ---CPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred ---CCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 1468999999999999999999999875
No 196
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.81 E-value=9.5e-19 Score=179.35 Aligned_cols=210 Identities=20% Similarity=0.231 Sum_probs=150.0
Q ss_pred CccCC-CCCCCCC---------------CCCcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCC
Q 009604 202 FEYGR-YGNPTTV---------------GAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 264 (531)
Q Consensus 202 ~~Y~R-~gnPt~~---------------g~e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~G 264 (531)
..|+| +|.|..+ .+++-|++|+|. ++|..++++++.+||+||+..|.|...+... ...|
T Consensus 63 ~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~----~maG 138 (420)
T KOG0257|consen 63 NQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQV----VMAG 138 (420)
T ss_pred ccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHH----hhcC
Confidence 45666 6777766 345556666665 9999999999999999999999998765433 2335
Q ss_pred cEEEEeCC-------------CCHHHHHHhccCCCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCC
Q 009604 265 ITATVIDP-------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 328 (531)
Q Consensus 265 i~v~~vd~-------------~d~e~Le~al~~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~ 328 (531)
...++++. .|.++++.++++ +||+|++++||||||.+.+ |++|+++|++||+++|.||+|.-.
T Consensus 139 ~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~ 217 (420)
T KOG0257|consen 139 GTPVFVPLKPKEGNVSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWL 217 (420)
T ss_pred CcceeeccccccccccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHH
Confidence 54444432 389999999998 4999999999999999986 778999999999999999997432
Q ss_pred cc-----c----cccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCC-CchHH-HHHHHH--HHH--
Q 009604 329 LN-----Q----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG-ALNPN-AAYLII--RGM-- 393 (531)
Q Consensus 329 ~~-----~----~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~-~~s~~-~a~l~l--~~L-- 393 (531)
+. . .|-.+...+.+.|++|+++-.|.+ .||+++++.++..+...+..... +..+. .|.... .++
T Consensus 218 v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWr-lGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~ 296 (420)
T KOG0257|consen 218 VYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWR-LGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELAC 296 (420)
T ss_pred hhCCCcceeeecCCchhheEEEeccccceeeeeeee-eeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhc
Confidence 21 1 122223568999999999988876 57777787888877766554332 12222 111111 111
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHcC
Q 009604 394 ------KTLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 394 ------~tl~~r~~~~~~na~~La~~L~~~ 417 (531)
.......+...++++.|++.|.+.
T Consensus 297 ~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 297 LQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333445667778999999999876
No 197
>PRK06855 aminotransferase; Validated
Probab=99.81 E-value=3.3e-17 Score=176.09 Aligned_cols=200 Identities=13% Similarity=0.135 Sum_probs=126.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccC-C
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN-N 285 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~-~ 285 (531)
.++++++++++++++.+++. ++.+||.|+++.|+|.... .... ...|+++..++. .|+++|+++++. .
T Consensus 95 ~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~-~~~~--~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~ 170 (433)
T PRK06855 95 TPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHS-SAEA--AHAGYPPVTYRLDPENNWYPDLDDLENKVKYNP 170 (433)
T ss_pred CHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHH-HHHH--HhcCCeEEEEecccccCCCCCHHHHHHHHhcCC
Confidence 34566666666699988875 8899999999999998732 2211 123554443321 378999999863 2
Q ss_pred CcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----cc-ccc---CCcEEEECCccccccCCC
Q 009604 286 NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-LSL---GADLVLHSATKFIGGHND 354 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~-l~~---gaDivv~S~sK~lgg~g~ 354 (531)
+++++++++|+||||.+++ +++|+++|+++|++||+||+|...... .+ ..+ +..+++.|+||.++.+|.
T Consensus 171 ~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGl 250 (433)
T PRK06855 171 SIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGS 250 (433)
T ss_pred CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcc
Confidence 4799999999999999998 457778899999999999998654221 11 111 234899999999986765
Q ss_pred ceEEEEEeC-----hH---HHHHHHHHhhhcCCCchHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHcCCC
Q 009604 355 VLAGSISGS-----GK---LVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTALRMAKILEAHPK 419 (531)
Q Consensus 355 v~gG~iv~~-----~~---li~~l~~~~~~~G~~~s~~~a~l~l~~L~------tl~~r~~~~~~na~~La~~L~~~p~ 419 (531)
+ .|+++++ +. +++.+...... ....+.+..+.+...++ .+....+...++.+.+.+.|++.++
T Consensus 251 R-iG~ii~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~ 327 (433)
T PRK06855 251 R-CGWIEVYNADKDEVFKKYINSILNAKMI-EVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPG 327 (433)
T ss_pred e-EEEEEEeCCchhhHHHHHHHHHHHhhcc-ccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5 6777752 22 22333222221 11223333333333332 2333344455667777888876654
No 198
>PRK07908 hypothetical protein; Provisional
Probab=99.81 E-value=6.3e-18 Score=176.31 Aligned_cols=257 Identities=16% Similarity=0.159 Sum_probs=165.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCCCcE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~tk 288 (531)
.+++.++++++++++.+++. +++| .+++..|.|.... ..++..|+++..++.+ |++ .+++ +++
T Consensus 74 ~~~~I~it~Ga~~al~~~~~--l~~~-~viv~~P~y~~~~----~~~~~~G~~i~~v~~~~~~~~d~~----~l~~-~~~ 141 (349)
T PRK07908 74 TPDEVLLLAGAAEGFALLAR--LRPR-RAAVVHPSFTEPE----AALRAAGIPVHRVVLDPPFRLDPA----AVPD-DAD 141 (349)
T ss_pred ChhhEEECCCHHHHHHHHHh--cCCC-eEEEeCCCChHHH----HHHHHcCCEEEeeccCcccCcChh----Hhcc-CCC
Confidence 34555555555699998887 5675 4566778887643 3445568888776543 333 3444 489
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc--c---cccCCcEEEECCccccccCCCceEEEEEeC
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--A---LSLGADLVLHSATKFIGGHNDVLAGSISGS 363 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~--~---l~~gaDivv~S~sK~lgg~g~v~gG~iv~~ 363 (531)
+|++++|+||||.+++.++|.++|++ +.++|+||+|....... + ......+++.|+||.++.+|. ..|+++++
T Consensus 142 ~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~Gl-RiG~~~~~ 219 (349)
T PRK07908 142 LVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGL-RVGYALGA 219 (349)
T ss_pred EEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccc-eeeeeecC
Confidence 99999999999999999999999975 78899999986432111 1 122234788899999986654 47888899
Q ss_pred hHHHHHHHHHhhhcCCCchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhh
Q 009604 364 GKLVTQIRNLHHVLGGALNPNAAYLIIR-----GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIAT 438 (531)
Q Consensus 364 ~~li~~l~~~~~~~G~~~s~~~a~l~l~-----~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~ 438 (531)
+++++.+......+. .++.....+.. ..+.+....++..++++.+.+.|+++ ++. +..|.
T Consensus 220 ~~~~~~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~----------- 284 (349)
T PRK07908 220 PDVLARLTRGRAHWP--VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GAR-VVDPA----------- 284 (349)
T ss_pred HHHHHHHHhcCCCCC--ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcE-eccCC-----------
Confidence 999888876544332 22222221111 22334344455566777788888876 432 22222
Q ss_pred hhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC-CCH
Q 009604 439 QQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV-EDF 517 (531)
Q Consensus 439 ~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl-E~~ 517 (531)
.|+++++.+++ ...+.+.|+..++.+..|..+. +..++.||||++- ++.
T Consensus 285 -----~g~~~~~~~~~----~~~~~~~l~~~gI~v~~g~~f~---------------------~~~~~~vRis~~~~~~~ 334 (349)
T PRK07908 285 -----AAPFVLVRVPD----AELLRKRLRERGIAVRRGDTFP---------------------GLDPDYLRLAVRPRAEV 334 (349)
T ss_pred -----CceEEEEECCc----HHHHHHHHHhCCEEEEECCCCC---------------------CCCCCeEEEEeCCCccH
Confidence 36789998864 2355556655567776664321 1125789999986 467
Q ss_pred HHHHHHHHHHHH
Q 009604 518 EDLKADVLQALH 529 (531)
Q Consensus 518 edli~dL~~AL~ 529 (531)
+.+++.|.+.+.
T Consensus 335 ~~l~~al~~~~~ 346 (349)
T PRK07908 335 PVLVQALAEILK 346 (349)
T ss_pred HHHHHHHHHHHh
Confidence 777777777654
No 199
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.81 E-value=6.4e-18 Score=176.95 Aligned_cols=260 Identities=13% Similarity=0.077 Sum_probs=172.9
Q ss_pred cEEEeCChHHHHHHHHHHhcc----CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCc
Q 009604 217 STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNV 287 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~----pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~t 287 (531)
..+++++|++++..++.++.. +||+|+++.+.|.+.. ..++..|+++..++. .|+++|+++++++ +
T Consensus 78 ~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~ 152 (371)
T PRK13520 78 YGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD----KAADMLGVELRRAPLDDDYRVDVKAVEDLIDDN-T 152 (371)
T ss_pred CeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH----HHHHHcCceEEEecCCCCCcCCHHHHHHHHhhC-C
Confidence 467888889999888876643 5799999998887633 344566888887763 3899999999875 7
Q ss_pred EEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc---c-----cccccCCcEEEECCccccccCCCceEEE
Q 009604 288 SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---Q-----KALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~---~-----~~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
++|++.+++|++|.+.|+++|.++|+++|+++++|++|+.+.. . +....++|.+..|.+|+..++. ..|++
T Consensus 153 ~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~-~~G~~ 231 (371)
T PRK13520 153 IGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPI-PAGGI 231 (371)
T ss_pred EEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccC-CceEE
Confidence 8788888999999999999999999999999999999874321 1 1112478999999999865432 23556
Q ss_pred EEeChHHHHHHHHHhhhc--------CCCchHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 360 ISGSGKLVTQIRNLHHVL--------GGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 360 iv~~~~li~~l~~~~~~~--------G~~~s~~~a~l~l~~L~-----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
++.++++++.+....... +++.+...+..+...++ .+..+.++..++++++.+.|++. ++..+..|
T Consensus 232 ~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 310 (371)
T PRK13520 232 LFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEP 310 (371)
T ss_pred EEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCC
Confidence 656766766654211110 11112222222222332 23445667778888888888765 44322211
Q ss_pred CCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCC
Q 009604 427 GLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDN 506 (531)
Q Consensus 427 gl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~ 506 (531)
..+++.|.++. .+.+.+.|...++.++.++ .++
T Consensus 311 -----------------~~~~v~~~~~~----~~~v~~~L~~~gi~v~~~~--------------------------~~~ 343 (371)
T PRK13520 311 -----------------VLNIVAFDDPN----PDEVREKLRERGWRVSVTR--------------------------CPE 343 (371)
T ss_pred -----------------CceEEEEecCC----HHHHHHHHHHCCceeccCC--------------------------CCC
Confidence 24578888762 3345555544354444210 135
Q ss_pred eEEEEecCCCHHHHHHHHHHHHHh
Q 009604 507 LVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 507 lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.||+|++..++++.++.+.++|++
T Consensus 344 ~iRis~~~~~t~edi~~~~~~l~~ 367 (371)
T PRK13520 344 ALRIVCMPHVTREHIENFLEDLKE 367 (371)
T ss_pred EEEEEEECCCCHHHHHHHHHHHHH
Confidence 799999988888888888888764
No 200
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.81 E-value=7.2e-18 Score=180.03 Aligned_cols=279 Identities=14% Similarity=0.138 Sum_probs=165.3
Q ss_pred CCcEEEeCChH-HHHHHHHHHhcc-----CCCEEEE-cCCCccchHHHHHh--hcccCCcEEEEeC------CCCHHHHH
Q 009604 215 AESTVIMASGM-SASTVMLLALVP-----AGGHIVT-TTDCYRKTRIFIET--VLPKMGITATVID------PADMEGLE 279 (531)
Q Consensus 215 ~e~~i~~sSG~-~Ai~~al~all~-----pGD~VIv-~~~~y~~t~~~~~~--~l~~~Gi~v~~vd------~~d~e~Le 279 (531)
+++ |++++|+ +++.+++.++++ +||.|++ ..|+|......... .+...+..+..++ ..|+++|+
T Consensus 97 ~~~-I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 175 (416)
T PRK09440 97 PQN-IALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH 175 (416)
T ss_pred hhh-EEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc
Confidence 344 5555554 999999999885 6899999 69999875432210 1122222222222 23677776
Q ss_pred HhccCCCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----c--ccccCCcEEEECCccccc
Q 009604 280 AALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K--ALSLGADLVLHSATKFIG 350 (531)
Q Consensus 280 ~al~~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~--~l~~gaDivv~S~sK~lg 350 (531)
+.+ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|..+... . +...+.-+++.|+||+ +
T Consensus 176 --~~~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~ 251 (416)
T PRK09440 176 --IDE-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-G 251 (416)
T ss_pred --cCC-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-C
Confidence 344 4899999999999999998 567888899999999999999753221 1 1111234888999996 5
Q ss_pred cCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHH--HHHH-----HHHHHHHHHHHHHHHHcC-CCce-
Q 009604 351 GHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--LHLR-----VQQQNSTALRMAKILEAH-PKVK- 421 (531)
Q Consensus 351 g~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~t--l~~r-----~~~~~~na~~La~~L~~~-p~v~- 421 (531)
.+| ...|++++++++++.+...........+.+...++...++. +... .+...++...+.+.|.++ +.+.
T Consensus 252 ~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~ 330 (416)
T PRK09440 252 LPG-VRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPC 330 (416)
T ss_pred CCc-ceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCe
Confidence 555 45789999999998888766555444454444444444432 1111 112234445566666654 2221
Q ss_pred EEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhc
Q 009604 422 RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKY 501 (531)
Q Consensus 422 ~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~ 501 (531)
.+..|. .|.++++.++........|.+.+...++.+..|..+. +.. .. ..
T Consensus 331 ~~~~p~----------------gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~----~~~------~~----~~ 380 (416)
T PRK09440 331 LIHKPE----------------GAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFF----PGL------DE----DW 380 (416)
T ss_pred EEecCC----------------CceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhC----CCC------cc----cc
Confidence 122221 4678888886411233566666666677777664431 000 00 00
Q ss_pred CCCCCeEEEEecC--CCHHHHHHHHHHHHH
Q 009604 502 GIMDNLVRFSFGV--EDFEDLKADVLQALH 529 (531)
Q Consensus 502 gi~~~lIRlSvGl--E~~edli~dL~~AL~ 529 (531)
+...+.+||+++. ++.++.++.|.++++
T Consensus 381 ~~~~~~iRis~~~~~~~l~~~i~~l~~~~~ 410 (416)
T PRK09440 381 PHAHQCIRMNYVQDDEEIEKGIAILAEEVE 410 (416)
T ss_pred CCcCceEEEEecCCHHHHHHHHHHHHHHHH
Confidence 0013689999974 233444555555554
No 201
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.81 E-value=7e-18 Score=180.12 Aligned_cols=235 Identities=18% Similarity=0.152 Sum_probs=155.2
Q ss_pred EEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHh-hcccCCcEEEEeCC------CCHHHHHHhccCCCcEEEE
Q 009604 219 VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDP------ADMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 219 i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~-~l~~~Gi~v~~vd~------~d~e~Le~al~~~~tklV~ 291 (531)
++++||++|+..++.+++++||+|+++.++|.+....... .+...|+++..++. .|+++++++++++++++|+
T Consensus 91 i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~ 170 (416)
T PRK00011 91 VQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLII 170 (416)
T ss_pred eecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEE
Confidence 6678999999999999999999999999999764321111 12334566665542 4789999999753589999
Q ss_pred EeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-----ccccccCCcEEEECCccccccCCCceEEEEEeC-hH
Q 009604 292 TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GK 365 (531)
Q Consensus 292 lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~ 365 (531)
++.++ +|...|+++|.++|+++|+++|+|++++.+.. ..++. ++|+++.|+||+++|+. ||+++++ ++
T Consensus 171 ~~~~~--~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l~g~~---gg~i~~~~~~ 244 (416)
T PRK00011 171 AGASA--YSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTLRGPR---GGLILTNDEE 244 (416)
T ss_pred ECCCc--CCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCCCCCC---ceEEEeCCHH
Confidence 86554 45678999999999999999999999754322 22344 78999999999986543 7888885 68
Q ss_pred HHHHHHHHhhh--cCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhh
Q 009604 366 LVTQIRNLHHV--LGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQ 439 (531)
Q Consensus 366 li~~l~~~~~~--~G~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~ 439 (531)
+.+.++..... .+.......+.+....++ .+..+.+++.++++.+.+.|++. ++. +. +. .
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~---~-------- 310 (416)
T PRK00011 245 LAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFR-VV-SG---G-------- 310 (416)
T ss_pred HHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCe-ee-ec---C--------
Confidence 88887654432 121122222221111112 34667788889999999999875 332 21 11 0
Q ss_pred hcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccC
Q 009604 440 QMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 476 (531)
Q Consensus 440 ~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~G 476 (531)
..++++++.+++.......+.+.|+..++.++.+
T Consensus 311 ---~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~ 344 (416)
T PRK00011 311 ---TDNHLVLVDLRSKGLTGKEAEAALEEANITVNKN 344 (416)
T ss_pred ---CCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccC
Confidence 0236788887532113345666666556666543
No 202
>PRK08354 putative aminotransferase; Provisional
Probab=99.81 E-value=8e-18 Score=173.01 Aligned_cols=147 Identities=20% Similarity=0.200 Sum_probs=106.9
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCC
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 295 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP 295 (531)
+++++++++++++.+++. ++.+||+|+++.|+|..... .++..|+++..++ .|++.+++++++ ++++++++|
T Consensus 55 ~~I~vt~G~~~al~~~~~-~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~~~-~d~~~l~~~~~~--~~~vi~~~P 126 (311)
T PRK08354 55 EPIVITAGITEALYLIGI-LALRDRKVIIPRHTYGEYER----VARFFAARIIKGP-NDPEKLEELVER--NSVVFFCNP 126 (311)
T ss_pred CCEEECCCHHHHHHHHHH-hhCCCCeEEEeCCCcHHHHH----HHHHcCCEEeecC-CCHHHHHHhhcC--CCEEEEecC
Confidence 444444444589988774 44589999999999988653 4455688876654 578999988863 678999999
Q ss_pred CCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCCccc-cccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHH
Q 009604 296 TNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR 371 (531)
Q Consensus 296 ~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~~~~-~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~ 371 (531)
+||||.+.+. ++|.++|+++|+++|+||+|...... ........+++.|+||.++-+|.+ .|++++ +.+.++
T Consensus 127 ~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~GlR-iG~~v~---~~~~l~ 202 (311)
T PRK08354 127 NNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGIR-VGYVKG---FEEAFR 202 (311)
T ss_pred CCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCccce-eeeeee---hHHHHH
Confidence 9999999974 56667788899999999998664321 111223458999999999867654 577777 445555
Q ss_pred HHh
Q 009604 372 NLH 374 (531)
Q Consensus 372 ~~~ 374 (531)
...
T Consensus 203 ~~~ 205 (311)
T PRK08354 203 SVR 205 (311)
T ss_pred HcC
Confidence 444
No 203
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.80 E-value=2.6e-17 Score=176.86 Aligned_cols=241 Identities=16% Similarity=0.138 Sum_probs=170.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHh---------ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHH
Q 009604 214 GAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGL 278 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~al---------l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~L 278 (531)
|.+++++++||++|+.+++.++ ++|||+||++.++|.++...+ ...|.++.++|. .|++++
T Consensus 77 g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v----~~~G~~pv~vdvd~~~~~id~~~l 152 (438)
T PRK15407 77 GVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPI----IQNGLVPVFVDVELPTYNIDASLL 152 (438)
T ss_pred CCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcCCcCHHHH
Confidence 7788999999999999998875 489999999999998876444 335777777764 278999
Q ss_pred HHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccc--cccCCcEEEECCc--cccccCCC
Q 009604 279 EAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA--LSLGADLVLHSAT--KFIGGHND 354 (531)
Q Consensus 279 e~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~--l~~gaDivv~S~s--K~lgg~g~ 354 (531)
++++++ +|++|++++ ++|...|+++|.++|+++|++||+|++++.+...+. ...-.|+.++|++ |.+....
T Consensus 153 e~~i~~-~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~~~fSf~~~k~~~~ge- 227 (438)
T PRK15407 153 EAAVSP-KTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFGDIATLSFYPAHHITMGE- 227 (438)
T ss_pred HHHcCc-CCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccCceEEEeCCCCCCccccC-
Confidence 999987 499999865 468889999999999999999999999876643332 2222489999975 6565432
Q ss_pred ceEEEEEeCh-HHHHHHHHHhh---------------------------------------hcCCCchHHHHHHHHHHHH
Q 009604 355 VLAGSISGSG-KLVTQIRNLHH---------------------------------------VLGGALNPNAAYLIIRGMK 394 (531)
Q Consensus 355 v~gG~iv~~~-~li~~l~~~~~---------------------------------------~~G~~~s~~~a~l~l~~L~ 394 (531)
||+++.++ ++.++++..+. .+...++.+.|.+++..|+
T Consensus 228 --GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~ 305 (438)
T PRK15407 228 --GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLE 305 (438)
T ss_pred --ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHH
Confidence 78888865 44444443221 0113467788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCCccc
Q 009604 395 TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAP 473 (531)
Q Consensus 395 tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl~~L~~~~iav 473 (531)
.++.+++++.++++.+.+.|.+.+.+. ..|..+....+ .-.++.+.++.. ...-++|++.|+..+|.+
T Consensus 306 ~l~~~~~~R~~~a~~y~~~L~~~~~~~--~~~~~~~~~~~---------~~~~~~i~~~~~~~~~Rd~l~~~L~~~GI~~ 374 (438)
T PRK15407 306 KLPGFIEARKANFAYLKEGLASLEDFL--ILPEATPNSDP---------SWFGFPITVKEDAGFTRVELVKYLEENKIGT 374 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcc--ccCcCCCCCee---------EEEEEEEEECCcCCCCHHHHHHHHHHCCCCc
Confidence 999999999999999999998766431 22322111000 012344555421 123467788887667665
Q ss_pred ccC
Q 009604 474 SFG 476 (531)
Q Consensus 474 S~G 476 (531)
...
T Consensus 375 ~~~ 377 (438)
T PRK15407 375 RLL 377 (438)
T ss_pred ccc
Confidence 543
No 204
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.80 E-value=4.3e-18 Score=176.51 Aligned_cols=250 Identities=15% Similarity=0.106 Sum_probs=169.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcc------------CC--CEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHH
Q 009604 216 ESTVIMASGMSASTVMLLALVP------------AG--GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADME 276 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~------------pG--D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e 276 (531)
++.+++++|++|+.+++.++.. +| ++|+++.+.|.+..... ...|+++..++. .|++
T Consensus 58 ~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~----~~~g~~~~~v~~~~~~~~d~~ 133 (345)
T cd06450 58 ADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAA----AYLDVKVRLVPVDEDGRMDPE 133 (345)
T ss_pred CCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHH----HHHhcCeEEeeeCCCCCcCHH
Confidence 4688999999999999987742 33 47888888888754433 233666666652 4799
Q ss_pred HHHHhccCC-----CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc-c---c--cc-cCCcEEEEC
Q 009604 277 GLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K---A--LS-LGADLVLHS 344 (531)
Q Consensus 277 ~Le~al~~~-----~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~-~---~--l~-~gaDivv~S 344 (531)
+|++++++. ++++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.+... . . .. .++|.++.|
T Consensus 134 ~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s 213 (345)
T cd06450 134 ALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVD 213 (345)
T ss_pred HHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEc
Confidence 999998750 3789999999999999999999999999999999999998765421 1 1 01 268999999
Q ss_pred CccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHcCCCceE
Q 009604 345 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG--MKTLHLRVQQQNSTALRMAKILEAHPKVKR 422 (531)
Q Consensus 345 ~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~--L~tl~~r~~~~~~na~~La~~L~~~p~v~~ 422 (531)
+||+++++.+ .|+++.+ ....|.+++. ...+..++++..+.++++.+.|++.+.+..
T Consensus 214 ~~K~l~~p~g--~g~~~~~-------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 272 (345)
T cd06450 214 PHKYGLVPLG--CSAVLVR-------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFEL 272 (345)
T ss_pred hhHhhCCCcc--hHHHHHH-------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9998865532 3544332 1222222222 234556667777888999999988876632
Q ss_pred EeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHH
Q 009604 423 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 499 (531)
Q Consensus 423 V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~---~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~ 499 (531)
+ .+. .++++.|.+++. .....++.+.|...++.... +.. +
T Consensus 273 ~-~~~----------------~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~---------~~~--~--------- 315 (345)
T cd06450 273 L-GEP----------------NLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVP---------ATT--L--------- 315 (345)
T ss_pred e-cCC----------------ceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEE---------eeE--E---------
Confidence 2 211 246899998652 23445677777543211110 000 0
Q ss_pred hcCCCCCeEEEEecCC-CHHHHHHHHHHHHHh
Q 009604 500 KYGIMDNLVRFSFGVE-DFEDLKADVLQALHA 530 (531)
Q Consensus 500 ~~gi~~~lIRlSvGlE-~~edli~dL~~AL~~ 530 (531)
+ .++.+|+|++.. ++++.++.|.++|++
T Consensus 316 --~-~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 316 --G-GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred --C-CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 0 246899999986 488889999988875
No 205
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.80 E-value=1.8e-17 Score=174.57 Aligned_cols=262 Identities=17% Similarity=0.122 Sum_probs=166.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC-----CCcE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN-----NNVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~-----~~tk 288 (531)
+.+++++++||+.|+..++..+.++||.|+++...|.++...+.. +. +..+. +...|+++|++++++ .+++
T Consensus 70 ~~~~~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~-~~--~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~ 145 (370)
T PRK05937 70 GAPEAFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV-IS--GWHQS-FRHNDLDHLESLLESCRQRSFGRI 145 (370)
T ss_pred CCCeEEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH-cC--CceEE-ecCCCHHHHHHHHHhhhccCCCcE
Confidence 456689999999888776666677899999999999888766533 22 44443 466789999998863 2367
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-ccc----cccC---CcEEEECCccccccCCCceEEEE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKA----LSLG---ADLVLHSATKFIGGHNDVLAGSI 360 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~~----l~~g---aDivv~S~sK~lgg~g~v~gG~i 360 (531)
+|++++++|++|.+.|+++|.++|+++|+++++|++++.+.. .+. ..++ .++++.|++|.+|+.| +|+
T Consensus 146 ~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~v- 221 (370)
T PRK05937 146 FIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AAL- 221 (370)
T ss_pred EEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eEE-
Confidence 888999999999999999999999999999999999986532 111 1223 2367889999999875 444
Q ss_pred EeChHHHHHHHHHh--hhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhh
Q 009604 361 SGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIAT 438 (531)
Q Consensus 361 v~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~ 438 (531)
++.++..+.+.... ..+....++.....+..+++.+....+...+..+.+.++|.+.-.. ..
T Consensus 222 l~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~---~~------------- 285 (370)
T PRK05937 222 LSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS---AA------------- 285 (370)
T ss_pred EcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC---CC-------------
Confidence 45566555444211 1223334555444444455544321122222333344444321000 00
Q ss_pred hhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHH
Q 009604 439 QQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFE 518 (531)
Q Consensus 439 ~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~e 518 (531)
.+.+..|.+++. ....+.+.|...++.++. ++.| ..+.||+|++..+++
T Consensus 286 -----~~~~~~i~~~~~--~~~~~~~~L~~~gi~v~~------~~~~------------------~~~~iRis~~~~~t~ 334 (370)
T PRK05937 286 -----PGCVQPIFLPGI--SEQELYSKLVETGIRVGV------VCFP------------------TGPFLRVNLHAFNTE 334 (370)
T ss_pred -----CCCEEEEEeCCh--hHHHHHHHHHHCCeeEEe------eCCC------------------CCCEEEEEcCCCCCH
Confidence 112334566542 335666666555554431 1112 135799999999999
Q ss_pred HHHHHHHHHHHh
Q 009604 519 DLKADVLQALHA 530 (531)
Q Consensus 519 dli~dL~~AL~~ 530 (531)
+.++.+.++|++
T Consensus 335 edid~l~~~L~~ 346 (370)
T PRK05937 335 DEVDILVSVLAT 346 (370)
T ss_pred HHHHHHHHHHHH
Confidence 999988888864
No 206
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.80 E-value=1.8e-17 Score=176.34 Aligned_cols=262 Identities=15% Similarity=0.125 Sum_probs=152.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc-----------EEEEeCCCCHHHHHHhc-
Q 009604 215 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI-----------TATVIDPADMEGLEAAL- 282 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi-----------~v~~vd~~d~e~Le~al- 282 (531)
++++++++++++++..+ ..++.+||+|+++.|+|......+ +..|+ ++..++.+..+.+...+
T Consensus 95 ~d~I~it~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 169 (402)
T TIGR03542 95 PEEIFISDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVDSN----VMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLP 169 (402)
T ss_pred HHHEEECCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHH----HHcCCccccccccccceEEEeecchhhCCCCCcc
Confidence 34555444445888875 566789999999999998765433 34455 66666532111111111
Q ss_pred cCCCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----ccc-cc----CCcEEEECCccccc
Q 009604 283 NNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SL----GADLVLHSATKFIG 350 (531)
Q Consensus 283 ~~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~l-~~----gaDivv~S~sK~lg 350 (531)
...++++|++++|+||||.+++ +++|+++|+++|++||+||+|...... .++ .. ...+++.|+||.+|
T Consensus 170 ~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g 249 (402)
T TIGR03542 170 EEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAG 249 (402)
T ss_pred ccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccC
Confidence 1124899999999999999998 678888899999999999998753221 111 11 12477899999998
Q ss_pred cCCCceEEEEEeChHHH--------HHHHHHhhhcCCCchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcC
Q 009604 351 GHNDVLAGSISGSGKLV--------TQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 351 g~g~v~gG~iv~~~~li--------~~l~~~~~~~G~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~~ 417 (531)
.+|.+ .|+++++++++ ..+...........+.....++...+ +.+....+...++.+.+.+.|+++
T Consensus 250 ~pGlR-iG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 328 (402)
T TIGR03542 250 FTGVR-LGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA 328 (402)
T ss_pred CCCcc-eEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77754 68888888776 12111111111123333222222222 223233344456677788888765
Q ss_pred CCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCCcccccCCcccccccCccccccCCCHH
Q 009604 418 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQS 496 (531)
Q Consensus 418 p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~-~~~iavS~Gg~~Sli~~p~~~s~~~~~~~ 496 (531)
++. + +++ ..|+.++++++.. .....|.+.|. ..++.+..|..+..
T Consensus 329 -~~~-~-~~~---------------~~~~f~~v~l~~~-~~~~~l~~~l~~~~gv~v~pg~~f~~--------------- 374 (402)
T TIGR03542 329 -GFK-V-YGG---------------EHAPYLWVKTPEG-ISSWDFFDFLLYQYHVVGTPGSGFGP--------------- 374 (402)
T ss_pred -Cce-e-cCC---------------CceeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCchhhCC---------------
Confidence 221 1 111 1356889998752 22345555542 34555555533210
Q ss_pred HHHhcCCCCCeEEEEecCCCHHHHHHH
Q 009604 497 ERLKYGIMDNLVRFSFGVEDFEDLKAD 523 (531)
Q Consensus 497 ~~~~~gi~~~lIRlSvGlE~~edli~d 523 (531)
..++++||+++. +.+++.+.
T Consensus 375 ------~~~~~iRis~~~-~~~~l~~~ 394 (402)
T TIGR03542 375 ------SGEGFVRFSAFG-KRENIVEA 394 (402)
T ss_pred ------CCCCEEEEEecC-CHHHHHHH
Confidence 124789999865 44443333
No 207
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=6.7e-18 Score=165.61 Aligned_cols=302 Identities=18% Similarity=0.227 Sum_probs=215.8
Q ss_pred ccCCCcccCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeCChHHHHHHHHHHhc-cCCCEEEEcC
Q 009604 178 VNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMASGMSASTVMLLALV-PAGGHIVTTT 246 (531)
Q Consensus 178 ~~sst~~f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~sSG~~Ai~~al~all-~pGD~VIv~~ 246 (531)
++|.|+..++.++..++.+...++-.|+ ..||.+ |.|..+|++||+..+.++++..+ ++|.+||+.+
T Consensus 26 LRSDTvT~PTdeMr~am~eA~vgDdVyG--eD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd 103 (384)
T KOG1368|consen 26 LRSDTVTVPTDEMRRAMAEASVGDDVYG--EDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGD 103 (384)
T ss_pred cccccccCChHHHHHHHhhcccCccccc--CCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEecc
Confidence 5788999999888888888888888886 456665 99999999999999999888776 4899999998
Q ss_pred CCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCC-------CcEEEEEeCCCCCCC-cccCHH---HHHH
Q 009604 247 DCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN-------NVSLFFTESPTNPFL-RCVDVK---LVSD 310 (531)
Q Consensus 247 ~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~-------~tklV~lesP~NPtG-~v~dl~---~I~~ 310 (531)
..|--.+..- .+...-|+.+..+.. .+++++++++... .|++|.+|+-+|.+| .+.|++ +|.+
T Consensus 104 ~~HI~~~E~g-g~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~ 182 (384)
T KOG1368|consen 104 RAHIHRYEQG-GISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKA 182 (384)
T ss_pred chheeehhcc-ChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHH
Confidence 8775443211 111223565555532 3799999999732 489999999999887 888866 6677
Q ss_pred HHHhcCCEEEEeCC--C----CCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCch--
Q 009604 311 LCHKKGAIVCIDGT--F----ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN-- 382 (531)
Q Consensus 311 la~~~gi~lIvD~a--~----a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s-- 382 (531)
+|+++|+.|++|.+ | +.+++.+-.-..+|-|..-+||.+|.+ +|.+++|+++++++.+..+..+|+.+-
T Consensus 183 lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQs 259 (384)
T KOG1368|consen 183 LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQS 259 (384)
T ss_pred HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHH
Confidence 89999999999998 2 223333323334677777799999876 477889999999999998888887654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHH
Q 009604 383 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 462 (531)
Q Consensus 383 ~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~f 462 (531)
...|..++-+|....-.+++-.+.+..|+++++..+.+ ++..|..+ .+|+.+.+....-.++.+
T Consensus 260 GvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i-~v~v~a~e---------------tNiv~~~l~q~~~~~~~l 323 (384)
T KOG1368|consen 260 GVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEI-RVEVPAVE---------------TNIVNMVLCQARLTAEEL 323 (384)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccce-eeecchhh---------------cceeeeecccccCCHHHH
Confidence 34445555566555556677778899999999876655 45555432 467888776544566777
Q ss_pred HHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009604 463 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 528 (531)
Q Consensus 463 l~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL 528 (531)
.+.++..++..-.| ....+|+.+...=+++.++-+..+|
T Consensus 324 ~~~~~k~gi~lm~~---------------------------~s~r~Rivlh~Qvt~~~ve~~~~~~ 362 (384)
T KOG1368|consen 324 CKFLEKNGILLMGG---------------------------ASRRIRIVLHHQVTDEDVEYVKSVL 362 (384)
T ss_pred HHHHHHCCeEEeec---------------------------cccceEEEEEEecCHHHHHHHHHHH
Confidence 77776544322111 1234899888766666666666655
No 208
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.80 E-value=2.3e-17 Score=175.88 Aligned_cols=235 Identities=12% Similarity=0.103 Sum_probs=139.1
Q ss_pred EEEeCCh-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE-----------EEEeCCCCHHHHHHhccCC
Q 009604 218 TVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-----------ATVIDPADMEGLEAALNNN 285 (531)
Q Consensus 218 ~i~~sSG-~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~-----------v~~vd~~d~e~Le~al~~~ 285 (531)
.|++++| .+++.++ ..++.+||+|++++|+|......+ +..|.+ +..++.+.-+.+...+...
T Consensus 101 ~I~it~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~~~----~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~ 175 (409)
T PRK07590 101 EIFISDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVDTN----VMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPEE 175 (409)
T ss_pred hEEECCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHH----HHcCCcccccccccccceeEeecccccCCcccCccc
Confidence 4555555 4888875 456789999999999998865444 333443 5555432111122112223
Q ss_pred CcEEEEEeCCCCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCCccc----ccc-cc----CCcEEEECCccccccCC
Q 009604 286 NVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SL----GADLVLHSATKFIGGHN 353 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~~~~----~~l-~~----gaDivv~S~sK~lgg~g 353 (531)
++|+|++++|+||||.+++. ++|+++|+++|++||+||+|...... .++ .. ...+++.|+||.++.+|
T Consensus 176 ~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pG 255 (409)
T PRK07590 176 KVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTG 255 (409)
T ss_pred CceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcC
Confidence 58999999999999999974 56777889999999999998743211 111 11 12477899999998666
Q ss_pred CceEEEEEeChHHHHHH------------HHHhhhcCCCchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHc
Q 009604 354 DVLAGSISGSGKLVTQI------------RNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEA 416 (531)
Q Consensus 354 ~v~gG~iv~~~~li~~l------------~~~~~~~G~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~La~~L~~ 416 (531)
. ..|++++++++++.+ ...........+.....++...+ +.+....+...++.+.+.+.|++
T Consensus 256 l-RiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 334 (409)
T PRK07590 256 T-RCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLES 334 (409)
T ss_pred c-eeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4 478999988887622 11111111123333322222222 23333344555677778888887
Q ss_pred CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCC
Q 009604 417 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGG 477 (531)
Q Consensus 417 ~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg 477 (531)
+ ++. +.-|. .|..+++.++.. ....+|...+ +..++.+..|.
T Consensus 335 ~-~~~-~~~~~----------------g~~f~wi~~~~~-~~~~~~~~~l~~~~gv~v~pg~ 377 (409)
T PRK07590 335 A-GFE-VYGGV----------------NAPYIWVKTPDG-MSSWDFFDKLLQEANVVGTPGS 377 (409)
T ss_pred c-CCc-eecCC----------------cceEEEEECCCC-CCHHHHHHHHHHHCCEEEeChh
Confidence 6 221 11111 356889998743 2234455444 33455555553
No 209
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.79 E-value=1.4e-17 Score=173.49 Aligned_cols=248 Identities=18% Similarity=0.216 Sum_probs=158.5
Q ss_pred cEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCC
Q 009604 217 STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 295 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP 295 (531)
+.|++++|+ ++|.++. .++++|| |+++.|+|..... .++..|+++..++.++ + .+.+ .++++++++|
T Consensus 72 ~~I~i~~Gs~e~i~~l~-~~~~~g~-v~v~~P~y~~y~~----~~~~~g~~~~~v~~~~-~----~~~~-~~~~v~l~nP 139 (339)
T PRK06959 72 AHVLPVAGSQAAIRALP-ALLPRGR-VGIAPLAYSEYAP----AFARHGHRVVPLDEAA-D----TLPA-ALTHLIVVNP 139 (339)
T ss_pred ccEEECcCHHHHHHHHH-HhcCCCe-EEEcCCCcHHHHH----HHHHCCCEEEeecccc-h----hccc-cCCEEEEeCC
Confidence 355566665 8887654 4678887 8889999987543 3455688887776543 2 2333 3689999999
Q ss_pred CCCCCcccCHHHHHHH---HHhcCCEEEEeCCCCCCcccccc----ccCCcEEEECCccccccCCCceEEEEEeChHHHH
Q 009604 296 TNPFLRCVDVKLVSDL---CHKKGAIVCIDGTFATPLNQKAL----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT 368 (531)
Q Consensus 296 ~NPtG~v~dl~~I~~l---a~~~gi~lIvD~a~a~~~~~~~l----~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~ 368 (531)
|||||.+++.+++.++ |++++.++|+||+|........+ ....-+++.|+||.+|..|.+ .|++++++++++
T Consensus 140 nNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlR-iGy~v~~~~li~ 218 (339)
T PRK06959 140 NNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVR-AGFVLAAPALLA 218 (339)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchh-eEEEecCHHHHH
Confidence 9999999987776665 45679999999998764321111 112238899999999866644 788889999999
Q ss_pred HHHHHhhhcCCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcc
Q 009604 369 QIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFG 445 (531)
Q Consensus 369 ~l~~~~~~~G~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g 445 (531)
.++.....++ .+......+...+ +......++..++++.+.+.|+++ ++. + ++ .+
T Consensus 219 ~l~~~~~~~~--vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~~-----------------~~ 276 (339)
T PRK06959 219 ALRDALGAWT--VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFA-V-HA-----------------TP 276 (339)
T ss_pred HHHHhcCCCC--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCC-c-cC-----------------cc
Confidence 9887655443 2333333333333 223333455556777888888875 221 1 01 13
Q ss_pred cEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe-cC-CCHHHHHHH
Q 009604 446 GVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GV-EDFEDLKAD 523 (531)
Q Consensus 446 ~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSv-Gl-E~~edli~d 523 (531)
.++++.++ + ..++.+.|...++.+.. + + ..++||||+ |. |+.+.+++.
T Consensus 277 ~f~~~~~~-~---~~~l~~~l~~~GI~vr~--~-----------------------~-~~~~lRisi~~~~~e~~~l~~a 326 (339)
T PRK06959 277 LFSWTDDP-R---AAALHAALARRGIWTRY--F-----------------------A-PPPSVRFGLPADEAEWQRLEDA 326 (339)
T ss_pred eEEEEeCC-C---HHHHHHHHHhCCeEEEE--C-----------------------C-CCCeEEEECCCCHHHHHHHHHH
Confidence 56677664 2 34566666555555420 0 0 135899999 44 455777777
Q ss_pred HHHHHH
Q 009604 524 VLQALH 529 (531)
Q Consensus 524 L~~AL~ 529 (531)
|.+.++
T Consensus 327 l~~~~~ 332 (339)
T PRK06959 327 LAECVP 332 (339)
T ss_pred HHHHHH
Confidence 776654
No 210
>PLN02231 alanine transaminase
Probab=99.79 E-value=7.2e-17 Score=177.32 Aligned_cols=202 Identities=15% Similarity=0.189 Sum_probs=132.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc-CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-------CCCHHHHHHhccCC-
Q 009604 215 AESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-------PADMEGLEAALNNN- 285 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~-pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-------~~d~e~Le~al~~~- 285 (531)
.+++++++++++|+.+++..++. +||.|+++.|.|......+ ...|.++..++ ..|+++|++++++.
T Consensus 191 pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~----~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~ 266 (534)
T PLN02231 191 PNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASI----ALHGGTLVPYYLDEATGWGLEISELKKQLEDAR 266 (534)
T ss_pred cccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHH----HHcCCEEEEEecCcccCCCCCHHHHHHHHHHHh
Confidence 45566666666999999999984 8999999999998755333 34466655553 23789999888641
Q ss_pred ----CcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc--c---c-cc----cC------CcEEE
Q 009604 286 ----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--K---A-LS----LG------ADLVL 342 (531)
Q Consensus 286 ----~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~--~---~-l~----~g------aDivv 342 (531)
++|+|++.+|+||||.+++ +++|+++|+++|++||+||+|...... . . .. .| .-+++
T Consensus 267 ~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l 346 (534)
T PLN02231 267 SKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSF 346 (534)
T ss_pred hcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEE
Confidence 4899999999999999996 568888899999999999998653221 0 1 01 11 13678
Q ss_pred ECCcccc-ccCCCceEEEEEe---ChHHHHHHHHHhhhc-CCC-chHHHHHHHHH-------HHHH----HHHHHHHHHH
Q 009604 343 HSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVL-GGA-LNPNAAYLIIR-------GMKT----LHLRVQQQNS 405 (531)
Q Consensus 343 ~S~sK~l-gg~g~v~gG~iv~---~~~li~~l~~~~~~~-G~~-~s~~~a~l~l~-------~L~t----l~~r~~~~~~ 405 (531)
+|+||.+ +-.|. .+|+++. ++++++.+....... ... .....+..++. ..+. .....+...+
T Consensus 347 ~S~SK~~~g~pGl-RiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~ 425 (534)
T PLN02231 347 QSVSKGYYGECGK-RGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLAR 425 (534)
T ss_pred eccCcccccCCcc-ceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 8999976 43443 4777764 678888876654321 111 11222222221 1111 1112345567
Q ss_pred HHHHHHHHHHcCCCce
Q 009604 406 TALRMAKILEAHPKVK 421 (531)
Q Consensus 406 na~~La~~L~~~p~v~ 421 (531)
+++.+.+.|++++++.
T Consensus 426 r~~~l~~~L~~~~gi~ 441 (534)
T PLN02231 426 RAKTLEDALNSLEGVT 441 (534)
T ss_pred HHHHHHHHHhcCCCce
Confidence 7888889998776653
No 211
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=1.4e-17 Score=172.99 Aligned_cols=221 Identities=15% Similarity=0.180 Sum_probs=145.5
Q ss_pred cEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCC---HHHHHHhccCCCcEEEEE
Q 009604 217 STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD---MEGLEAALNNNNVSLFFT 292 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d---~e~Le~al~~~~tklV~l 292 (531)
+.|++++|+ ++|.+++.++ |+|+++.|+|.... ..++..|+++..++.++ .+.. .+. ++++|++
T Consensus 77 ~~i~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~--~~~--~~~~i~i 144 (335)
T PRK14808 77 NNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYR----IFAKAVGAKFLEVPLTKDLRIPEV--NVG--EGDVVFI 144 (335)
T ss_pred ceEEEcCCHHHHHHHHHHHh----CcEEECCCCHHHHH----HHHHHcCCeEEEecCCCcCCCChh--Hcc--CCCEEEE
Confidence 345555655 9999998877 78999999998754 34455688887776431 1111 232 3799999
Q ss_pred eCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc---cccc-cCCcEEEECCccccccCCCceEEEEEeChHHHH
Q 009604 293 ESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KALS-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVT 368 (531)
Q Consensus 293 esP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~---~~l~-~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~ 368 (531)
++|+||||.+++.+++.+++ +++++||+||+|...... .... ...-+++.|+||.++..|. ..|++++++++++
T Consensus 145 ~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~Gl-RvG~~v~~~~~~~ 222 (335)
T PRK14808 145 PNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQ-RIGYVVSSEKFID 222 (335)
T ss_pred eCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCccc-ceEEEEeCHHHHH
Confidence 99999999999999999998 579999999998653211 1111 1234888999999996664 4689999999998
Q ss_pred HHHHHhhhcCCCchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcc
Q 009604 369 QIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFG 445 (531)
Q Consensus 369 ~l~~~~~~~G~~~s~~~a~l~l~~---L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g 445 (531)
.+......++. +.....++... .+.+..+.+...++.+.+.+.|+++ ++. + +|. .|
T Consensus 223 ~l~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~~~----------------~g 281 (335)
T PRK14808 223 AYNRVRLPFNV--SYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYR-I-TDS----------------RG 281 (335)
T ss_pred HHHHhcCCCCC--CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-CCC----------------CC
Confidence 88766533332 33222222222 3334444555566677788888875 232 2 221 36
Q ss_pred cEEEEEEcCCHHHHHHHHHHcCCCCcccc
Q 009604 446 GVVSFEVDGDLTATIKFIDALKIPYIAPS 474 (531)
Q Consensus 446 ~ivsf~l~g~~~~~~~fl~~L~~~~iavS 474 (531)
+++++.+++. ....+.+.|...++.+.
T Consensus 282 ~f~~~~l~~~--~~~~~~~~l~~~Gi~V~ 308 (335)
T PRK14808 282 NFVFIFMEKE--EKERLLEHLRAKNIAVR 308 (335)
T ss_pred eEEEEeCCCc--cHHHHHHHHHHCCeEEE
Confidence 7889988642 23566677765555443
No 212
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.79 E-value=2.6e-17 Score=189.22 Aligned_cols=295 Identities=16% Similarity=0.074 Sum_probs=183.6
Q ss_pred EEEeCChHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-------------C--HHHHHHh
Q 009604 218 TVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------------D--MEGLEAA 281 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~al-l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-------------d--~e~Le~a 281 (531)
++|++++++|+++++.++ +++||+|+++...|.+...++ ..+++.|+++.+++.+ + .++|++.
T Consensus 100 VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~-~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~ 178 (805)
T PLN02724 100 CVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIR-EYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRR 178 (805)
T ss_pred EEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHH-HHHHHcCCeEEeccchhccccccccccccccchhhhhhh
Confidence 455556679999999887 789999999999998877544 5667779998887643 1 1446554
Q ss_pred cc---------CCCcEEEEEeCCCCCCCcccCHHHHHHHHHhc--------CCEEEEeCCCCCCc-cccccccCCcEEEE
Q 009604 282 LN---------NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--------GAIVCIDGTFATPL-NQKALSLGADLVLH 343 (531)
Q Consensus 282 l~---------~~~tklV~lesP~NPtG~v~dl~~I~~la~~~--------gi~lIvD~a~a~~~-~~~~l~~gaDivv~ 343 (531)
++ ..+|++|.+.+.+|.+|.++|++.|.++++.. ++++++|.+++.+. ..+..++++|++++
T Consensus 179 ~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~ 258 (805)
T PLN02724 179 NTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVV 258 (805)
T ss_pred hhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEE
Confidence 31 12478999999999999999999775555432 36899999987654 35555679999999
Q ss_pred CCccccccCCCceEEEEEeChHHHHHHHHHhhhc------------------------CCCchHHHHHHHHHHHHHHHH-
Q 009604 344 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL------------------------GGALNPNAAYLIIRGMKTLHL- 398 (531)
Q Consensus 344 S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~------------------------G~~~s~~~a~l~l~~L~tl~~- 398 (531)
|+||++|++.+ .|+++.++++.+.+....... .++.+......+..+++.+..
T Consensus 259 S~HK~~GgP~G--~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~i 336 (805)
T PLN02724 259 SFYKIFGYPTG--LGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRL 336 (805)
T ss_pred ecceeccCCCC--ceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHh
Confidence 99999994433 588888887776654321111 112222222223344444432
Q ss_pred ----HHHHHHHHHHHHHHHHHcCC------CceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC------HHHHHHH
Q 009604 399 ----RVQQQNSTALRMAKILEAHP------KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATIKF 462 (531)
Q Consensus 399 ----r~~~~~~na~~La~~L~~~p------~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~------~~~~~~f 462 (531)
..++..+.++++.+.|.+.+ .| .++-+.... .. ....+++++|.+.+. ...+..+
T Consensus 337 g~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v-~iyg~~~~~-~~-------~~~r~~ivsFnv~~~~~~~v~~~~v~~l 407 (805)
T PLN02724 337 TISAIAMHTWALTHYVANSLRNLKHGNGAPVC-VLYGNHTFK-LE-------FHIQGPIVTFNLKRADGSWVGHREVEKL 407 (805)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhccCCCCCeEE-EEcCCCCCC-CC-------cccccCEEEEEEEcCCCCEeCHHHHHHH
Confidence 11223345566666776654 23 233221000 00 012578999999752 1223333
Q ss_pred HHHcCCCCcccccCCcccccccCccccccCCCHHHHH--------------h-cCCCCCeEEEEecCCCHHHHHHHHHHH
Q 009604 463 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL--------------K-YGIMDNLVRFSFGVEDFEDLKADVLQA 527 (531)
Q Consensus 463 l~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~--------------~-~gi~~~lIRlSvGlE~~edli~dL~~A 527 (531)
. ...+|.+..|..|.- +.+..+..+..++.. . .+...+.||+|+|..++.+.|+.|.++
T Consensus 408 ~---~~~gI~vR~G~~Ca~---~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~ 481 (805)
T PLN02724 408 A---SLSGIQLRTGCFCNP---GACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDF 481 (805)
T ss_pred H---HhcCcEEeeccccCc---hHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHH
Confidence 2 346788998866541 111111111211111 0 122348999999999999999999999
Q ss_pred HHh
Q 009604 528 LHA 530 (531)
Q Consensus 528 L~~ 530 (531)
|++
T Consensus 482 l~~ 484 (805)
T PLN02724 482 IIS 484 (805)
T ss_pred HHH
Confidence 874
No 213
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.78 E-value=4.4e-17 Score=165.21 Aligned_cols=299 Identities=20% Similarity=0.206 Sum_probs=201.3
Q ss_pred ccCCCcccCCHHHHHHHHhhc-cCCCccCCCCCCCCC----------CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcC
Q 009604 178 VNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTV----------GAESTVIMASGMSASTVMLLALVPAGGHIVTTT 246 (531)
Q Consensus 178 ~~sst~~f~~~~~~~~~~~~~-~~~~~Y~R~gnPt~~----------g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~ 246 (531)
+.|.++.-++.+.+.+..... ...-.|+ ..|+.+ |.+.++|++|||+|+.++|.+.++||+.|++..
T Consensus 4 f~SDn~~g~~~~m~eam~~a~~~~~~~YG--~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~ 81 (342)
T COG2008 4 FRSDNVAGPTPEMREALAAANAVGDDVYG--EDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICHE 81 (342)
T ss_pred cccCccCCCCHHHHHHHHhccccCCCCCC--CCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEec
Confidence 566777777777766655544 3344564 335444 779999999999999999999999999999998
Q ss_pred CCccchHHHHHhhcccC--CcEEEEeCC----CCHHHHHHhccCC-----CcEEEEEeCCCCCCCcccCH---HHHHHHH
Q 009604 247 DCYRKTRIFIETVLPKM--GITATVIDP----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDV---KLVSDLC 312 (531)
Q Consensus 247 ~~y~~t~~~~~~~l~~~--Gi~v~~vd~----~d~e~Le~al~~~-----~tklV~lesP~NPtG~v~dl---~~I~~la 312 (531)
..|-.++.. ...+.+ +.++..++. .++++|++.+++. .+.++++++.+|..|+++++ ++|.++|
T Consensus 82 ~aHi~~~E~--Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~ 159 (342)
T COG2008 82 TAHIYTDEC--GAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVC 159 (342)
T ss_pred cccceeccc--CcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHH
Confidence 877554321 011112 244444442 3799999988642 36778888888888999985 5677789
Q ss_pred HhcCCEEEEeCCC------CCCccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchH--H
Q 009604 313 HKKGAIVCIDGTF------ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP--N 384 (531)
Q Consensus 313 ~~~gi~lIvD~a~------a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~--~ 384 (531)
|++|++|++|.+- +.+....-...++|.+.+.+||.++.+. +.+++++.+++++++.+++..|+.++. +
T Consensus 160 k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~ 236 (342)
T COG2008 160 KEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARF 236 (342)
T ss_pred HHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhH
Confidence 9999999999981 1122233345689999999999988664 556778999999999998888876653 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHH
Q 009604 385 AAYLIIRGMKTLHLRVQQQNST--ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 462 (531)
Q Consensus 385 ~a~l~l~~L~tl~~r~~~~~~n--a~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~f 462 (531)
.+...+..|++-..++....+| +++|++.|...|+++ +..|. ..|++.+.++....
T Consensus 237 laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~-~~~~~----------------~tN~vf~~l~~~~i----- 294 (342)
T COG2008 237 LAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVK-LAFPV----------------ETNMVFVRLPESAI----- 294 (342)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCce-eccCC----------------cccEEEEECChHHH-----
Confidence 3333334455544555556677 999999999887774 33331 25788888864211
Q ss_pred HHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCC--CeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 463 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD--NLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 463 l~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~--~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+.|+..+.-.-.| . .+.. ..+|+-..+..+++.+++|..+++.
T Consensus 295 -~~l~~~~~~~~~~-~-----------------------~~~~~~~~vRfvts~a~~~edv~~~~~~~~~ 339 (342)
T COG2008 295 -EALRLAGALFYRG-V-----------------------LIGAHGEIVRFVTSWATSEEDVDELVAAIKA 339 (342)
T ss_pred -HHHHhhchhheee-e-----------------------eccCCCceEEEEeeccCCHHHHHHHHHHHHH
Confidence 2332211100010 0 0111 3699999998888888888877764
No 214
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=3.1e-17 Score=177.27 Aligned_cols=267 Identities=18% Similarity=0.108 Sum_probs=164.6
Q ss_pred CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcc------cCCcEEEEeCC-----CCHHHHHHhccCCCcEEE
Q 009604 222 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP------KMGITATVIDP-----ADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 222 sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~------~~Gi~v~~vd~-----~d~e~Le~al~~~~tklV 290 (531)
+||++|+.+++.+++++||+|+++...|++.........+ ..++++..++. .|+++|++++++.++++|
T Consensus 107 ~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lv 186 (452)
T PTZ00094 107 YSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLI 186 (452)
T ss_pred CchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEE
Confidence 6899999999999999999999999999875432211100 11133333322 389999999965347787
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-----ccccccCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
++. ++.+|...|+++|.++||++|+++++|++++.+.. ..++. ++|+++.|+||+++|+. ||+++.+++
T Consensus 187 i~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-~~D~l~~S~hK~l~GP~---Gg~l~~~~~ 260 (452)
T PTZ00094 187 IAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-YADVVTTTTHKSLRGPR---SGLIFYRKK 260 (452)
T ss_pred EEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-CCcEEEcCCccCCCCCC---ceEEEEecc
Confidence 763 34599999999999999999999999999877643 22333 79999999999987664 577766665
Q ss_pred HHHHHHHHh-----hhcCCCchHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhh
Q 009604 366 LVTQIRNLH-----HVLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHH 435 (531)
Q Consensus 366 li~~l~~~~-----~~~G~~~s~~~a~l~l~~L~tl-----~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~ 435 (531)
+.+.+.... ..+.+..++...+.+..+++.+ ....++..++++++.+.|.+. ++ .+..++-.+ +
T Consensus 261 ~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~-~v~~~~~~~---~- 334 (452)
T PTZ00094 261 VKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GY-DLVTGGTDN---H- 334 (452)
T ss_pred cchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-Cc-EEecCCCCC---c-
Confidence 544332211 1111233333333334445444 234456667888888888764 43 233332111 1
Q ss_pred hhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009604 436 IATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 515 (531)
Q Consensus 436 l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE 515 (531)
-.++.|..++ .....+...|+..+|.++.-+.. +.+ ....++.||+|++..
T Consensus 335 ---------~~~v~~~~~~--~~~~~~~~~L~~~gI~vs~~~~p---~~~---------------~~~~~~~vRis~~~~ 385 (452)
T PTZ00094 335 ---------LVLVDLRPFG--ITGSKMEKLLDAVNISVNKNTIP---GDK---------------SALNPSGVRLGTPAL 385 (452)
T ss_pred ---------eEeecCCcCC--CCHHHHHHHHHHCCcEEecccCC---CCC---------------cCCCCCeEEECCHHH
Confidence 1345555543 22334455555456666522110 000 011257899999776
Q ss_pred CH----HHHHHHHHHHHH
Q 009604 516 DF----EDLKADVLQALH 529 (531)
Q Consensus 516 ~~----edli~dL~~AL~ 529 (531)
++ ++.++.|.++|.
T Consensus 386 tt~g~~~~di~~l~~~l~ 403 (452)
T PTZ00094 386 TTRGAKEKDFKFVADFLD 403 (452)
T ss_pred HhCCCCHHHHHHHHHHHH
Confidence 65 666777666665
No 215
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.78 E-value=7e-17 Score=174.14 Aligned_cols=268 Identities=19% Similarity=0.245 Sum_probs=177.2
Q ss_pred cEEEeCChHHHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----CHHHHHHhccCCCcEEEE
Q 009604 217 STVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----DMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all-~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----d~e~Le~al~~~~tklV~ 291 (531)
..+++++|++++..++.++. ++||+|+++.+.|+.....+...+...|++++.++.+ |+++|+++++++ |++|+
T Consensus 131 ~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~~~l~~~i~~~-t~~v~ 209 (447)
T PRK00451 131 NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDLEALEAAVDDD-TAAVV 209 (447)
T ss_pred eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCHHHHHHhcCCC-eEEEE
Confidence 45677777788888888874 7999999999999887766655556678998888754 789999999874 99999
Q ss_pred EeCCCCCCCcccCHHHHHHHHHhcCCEEEE--eCCCCCCccccccccCCcEEEECCccc-----cccCCCceEEEEEeCh
Q 009604 292 TESPTNPFLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLHSATKF-----IGGHNDVLAGSISGSG 364 (531)
Q Consensus 292 lesP~NPtG~v~dl~~I~~la~~~gi~lIv--D~a~a~~~~~~~l~~gaDivv~S~sK~-----lgg~g~v~gG~iv~~~ 364 (531)
+++| |+||.+.|+++|.++||++|+++++ |... .+....+..+|+|+++.|.+|+ ++|++ +|+++.++
T Consensus 210 l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~-~g~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg---~G~l~~~~ 284 (447)
T PRK00451 210 VQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVS-LGLLKPPGEYGADIVVGEGQPLGIPLSFGGPY---LGFFATRK 284 (447)
T ss_pred EECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHH-hccCCCcccCCCCEEEECCCcCCCCCCCCCCC---chHHHhhH
Confidence 9999 8999999999999999999999998 5442 2333344578999999987775 55554 68888888
Q ss_pred HHHHHHHH-------------------------HhhhcCC-Cc---hH---HHHHHHHH--HHHHHHHHHHHHHHHHHHH
Q 009604 365 KLVTQIRN-------------------------LHHVLGG-AL---NP---NAAYLIIR--GMKTLHLRVQQQNSTALRM 410 (531)
Q Consensus 365 ~li~~l~~-------------------------~~~~~G~-~~---s~---~~a~l~l~--~L~tl~~r~~~~~~na~~L 410 (531)
++++.+.. .+...+. .. .. ..++..++ +-+.+....++..++++.+
T Consensus 285 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l 364 (447)
T PRK00451 285 KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYL 364 (447)
T ss_pred HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Confidence 77766310 0011110 00 11 12221111 1123455566777888888
Q ss_pred HHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccc
Q 009604 411 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 490 (531)
Q Consensus 411 a~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~ 490 (531)
.+.|++.++++. . ++ + +-.++.+.++. ...+|.+.|...++...+-+ .+ |
T Consensus 365 ~~~L~~~~g~~~-~-~~----~-----------~~~~~~v~~~~---~~~~~~~~L~~~gi~~~~~~------~~----~ 414 (447)
T PRK00451 365 AERLAEIGGVEL-F-DG----P-----------FFNEFVVRLPK---PAEEVNEALLEKGILGGYDL------GR----Y 414 (447)
T ss_pred HHHHhhcCCEEe-c-CC----C-----------eEEEEEEecCC---CHHHHHHHHHhcCCCCCccc------cc----c
Confidence 999988766532 1 11 1 11233444432 23566777754443221110 00 0
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 491 WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 491 ~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
. + +. ++++|+|+...++++.++.|.++|++
T Consensus 415 ~--~-------~~-~~~~rvs~~~~~t~e~i~~l~~~L~~ 444 (447)
T PRK00451 415 Y--P-------EL-GNHLLVCVTEKRTKEDIDALVAALGE 444 (447)
T ss_pred c--C-------Cc-CCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 0 0 11 36899999988888889999888875
No 216
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.77 E-value=7e-17 Score=172.01 Aligned_cols=198 Identities=16% Similarity=0.155 Sum_probs=128.2
Q ss_pred CCcEEE--eCChHHHHHHHHH---HhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhc
Q 009604 215 AESTVI--MASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAAL 282 (531)
Q Consensus 215 ~e~~i~--~sSG~~Ai~~al~---all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al 282 (531)
++++++ +.+|+.|+.+++. ++++|||+|++++|+|..... .++..|+++..++. .|++.+++++
T Consensus 95 ~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~ 170 (404)
T PTZ00376 95 EKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN----IFKSAGLNVKEYRYYDPKTKGLDFDGMLEDL 170 (404)
T ss_pred cCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCceeeccccCcccCCcCHHHHHHHH
Confidence 345552 5555577776654 678999999999999988654 34455777666654 2688998888
Q ss_pred cC--CCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcccc------c----cccC-CcEEEECCc
Q 009604 283 NN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK------A----LSLG-ADLVLHSAT 346 (531)
Q Consensus 283 ~~--~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~------~----l~~g-aDivv~S~s 346 (531)
+. .+++++++++||||||.+++ +++|+++|++||++||+|++|....... + ...+ .-+++.|+|
T Consensus 171 ~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfS 250 (404)
T PTZ00376 171 RTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFS 250 (404)
T ss_pred HhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 52 23678888999999999987 5577788999999999999986543211 1 1111 248899999
Q ss_pred cccccCCCceEEEE---EeChHHHHHHH----HHhhhcCCCchHHHHHHHHHHHHH----------HHHHHHHHHHHHHH
Q 009604 347 KFIGGHNDVLAGSI---SGSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMKT----------LHLRVQQQNSTALR 409 (531)
Q Consensus 347 K~lgg~g~v~gG~i---v~~~~li~~l~----~~~~~~G~~~s~~~a~l~l~~L~t----------l~~r~~~~~~na~~ 409 (531)
|.++..|.+ .|++ ++++++++.+. ..........+.....++...++. +....++..++++.
T Consensus 251 K~~~~~GlR-vG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~ 329 (404)
T PTZ00376 251 KNMGLYGER-IGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQL 329 (404)
T ss_pred Ccccccccc-cceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999977765 5665 56777655443 222222223333333333333321 22223345566777
Q ss_pred HHHHHHcC
Q 009604 410 MAKILEAH 417 (531)
Q Consensus 410 La~~L~~~ 417 (531)
+.+.|+++
T Consensus 330 l~~~L~~~ 337 (404)
T PTZ00376 330 LYDELKAL 337 (404)
T ss_pred HHHHHHhc
Confidence 88888765
No 217
>PLN02368 alanine transaminase
Probab=99.77 E-value=8.2e-17 Score=171.57 Aligned_cols=201 Identities=13% Similarity=0.133 Sum_probs=136.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-------CCCHHHHHHhccC--
Q 009604 215 AESTVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-------PADMEGLEAALNN-- 284 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all-~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-------~~d~e~Le~al~~-- 284 (531)
.+++++++++++++.+++.+++ ++||+|+++.|+|...... +...|.++..++ ..|+++|++++++
T Consensus 130 ~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~----~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~ 205 (407)
T PLN02368 130 PELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSAT----ISLLGGTLVPYYLEESENWGLDVNNLRQSVAQAR 205 (407)
T ss_pred hhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHH----HHHcCCEEEEEecccccCCCCCHHHHHHHHHHHh
Confidence 3455555555589999999988 7999999999999986543 344566666553 2378999998863
Q ss_pred ---CCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc-----c-ccc----c-------cCCcEE
Q 009604 285 ---NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----Q-KAL----S-------LGADLV 341 (531)
Q Consensus 285 ---~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~-----~-~~l----~-------~gaDiv 341 (531)
.++|+|++++|+||||.+++ +++|+++|+++|++||+||+|..... . ... . .+.-++
T Consensus 206 ~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~ 285 (407)
T PLN02368 206 SKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVS 285 (407)
T ss_pred hcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEE
Confidence 14899999999999999997 55677789999999999999865431 1 101 1 113488
Q ss_pred EECCcccc-ccCCCceEEEEE---eChHHHHHHHHHhhhcCCCchHHHHHHHHHHHH--------------HHHHHHHHH
Q 009604 342 LHSATKFI-GGHNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK--------------TLHLRVQQQ 403 (531)
Q Consensus 342 v~S~sK~l-gg~g~v~gG~iv---~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~--------------tl~~r~~~~ 403 (531)
++|+||.+ +-.|.+ .|+++ +++++++.+...... ....+....+++...++ .+....+..
T Consensus 286 ~~SfSK~~~~~~GlR-iGy~i~~~~~~~li~~~~~~~~~-~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 363 (407)
T PLN02368 286 FHTVSKGYWGECGQR-GGYFEMTNIPPKTVEEIYKVASI-ALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESL 363 (407)
T ss_pred EecCCcccccCCccc-eEEEEEeCCCHHHHHHHHHHhcc-cCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHH
Confidence 89999998 556654 67776 477888888775422 22233333333333332 112234455
Q ss_pred HHHHHHHHHHHHcCCCce
Q 009604 404 NSTALRMAKILEAHPKVK 421 (531)
Q Consensus 404 ~~na~~La~~L~~~p~v~ 421 (531)
.+++..+.+.|++.|++.
T Consensus 364 ~~rr~~~~~~L~~~~g~~ 381 (407)
T PLN02368 364 RRRARMMTDGFNSCKNVV 381 (407)
T ss_pred HHHHHHHHHHHhCCCCeE
Confidence 667778889998877653
No 218
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=3.2e-16 Score=158.53 Aligned_cols=269 Identities=18% Similarity=0.193 Sum_probs=176.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-------CHHHHHHhccCCC
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------DMEGLEAALNNNN 286 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-------d~e~Le~al~~~~ 286 (531)
.+++++++++..+||.+++.+|.+||..|++++|.|+-. .......|++++++|.. |++.+|++++++
T Consensus 125 ~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y----~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DEN- 199 (447)
T KOG0259|consen 125 TADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLY----DTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADEN- 199 (447)
T ss_pred CcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchH----HHhhhhcCceeEeecccCcccceechHHHHHhhccC-
Confidence 678888888888999999999999999999999999642 24456679999999853 899999999985
Q ss_pred cEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc----cccc-cc---CCcEEEECCccccccCCCc
Q 009604 287 VSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL-SL---GADLVLHSATKFIGGHNDV 355 (531)
Q Consensus 287 tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~----~~~l-~~---gaDivv~S~sK~lgg~g~v 355 (531)
|.++++.||+||.|.+++ |++|+++|+++|+++|.||+|...+. +-|. .+ -.-+.+.+.+|-+--+|++
T Consensus 200 T~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWR 279 (447)
T KOG0259|consen 200 TVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWR 279 (447)
T ss_pred eeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCce
Confidence 999999999999999986 78999999999999999999764322 1111 11 1347888999999888888
Q ss_pred eEEEEEeCh-------HHHHHHHHHhhhcCCCchHHHHHH---HHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCceEEe
Q 009604 356 LAGSISGSG-------KLVTQIRNLHHVLGGALNPNAAYL---IIRGM-KTLHLRVQQQNSTALRMAKILEAHPKVKRVH 424 (531)
Q Consensus 356 ~gG~iv~~~-------~li~~l~~~~~~~G~~~s~~~a~l---~l~~L-~tl~~r~~~~~~na~~La~~L~~~p~v~~V~ 424 (531)
+|.+++-++ ..++.+............-..+++ +.+.- +.+..+..-...|++...++|++.|.+....
T Consensus 280 lGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~ 359 (447)
T KOG0259|consen 280 LGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPV 359 (447)
T ss_pred eeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCc
Confidence 655554332 223344433332221111111111 11111 2234555666788999999999988765333
Q ss_pred CCCCCCCchhhhhhhhcCCcccEEEEEEcC----CHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHh
Q 009604 425 YPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 500 (531)
Q Consensus 425 ~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g----~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~ 500 (531)
-|. ....+.+.+.- +.++-..|+..|-. -+|+++.|+..
T Consensus 360 kPe----------------g~mylmv~l~~s~~~~~~dD~dFc~kL~~---------Eesv~~LPG~a------------ 402 (447)
T KOG0259|consen 360 KPE----------------GCMYLMVKLNLSLFPDIEDDVDFCQKLAR---------EESVICLPGQA------------ 402 (447)
T ss_pred CCC----------------cceEEEeccchhhhccccccHHHHHHHhh---------hcceEEecccc------------
Confidence 332 11223333321 11222456666532 25666767542
Q ss_pred cCCCCCeEEEEecCCCH--HHHHHHHH
Q 009604 501 YGIMDNLVRFSFGVEDF--EDLKADVL 525 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE~~--edli~dL~ 525 (531)
.|. ++++|++++.|.. +|..++|+
T Consensus 403 f~~-~nw~Ri~i~~~~~~leea~~Rik 428 (447)
T KOG0259|consen 403 FGL-KNWLRIVITVEEEMLEEAFSRIK 428 (447)
T ss_pred ccC-CCeEEEEEccChHHHHHHHHHHH
Confidence 222 6899999998763 44444443
No 219
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.76 E-value=1.5e-16 Score=168.93 Aligned_cols=263 Identities=14% Similarity=0.118 Sum_probs=166.0
Q ss_pred CcEEEeCChHHHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhh---------cccCCcEEEEeCCCCHHHHHHhccCC
Q 009604 216 ESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETV---------LPKMGITATVIDPADMEGLEAALNNN 285 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pG-D~VIv~~~~y~~t~~~~~~~---------l~~~Gi~v~~vd~~d~e~Le~al~~~ 285 (531)
+++++++||++|+..+++.+..+| ++|+...+.|++........ +...+..+..++..|++++++++++
T Consensus 104 ~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~- 182 (398)
T PRK03244 104 GRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDD- 182 (398)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcC-
Confidence 578889999999999998766676 46666666777653221111 1112234555666789999999876
Q ss_pred CcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCc------cccccccCCcEEEECCccccccCCCc
Q 009604 286 NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDV 355 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~------~~~~l~~gaDivv~S~sK~lgg~g~v 355 (531)
++++|++|+++||+|.+.+ +++|.++|++||+++|+||++.... .........|++ +++|.+++ | .
T Consensus 183 ~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~--t~sK~l~~-G-~ 258 (398)
T PRK03244 183 DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVV--TLAKGLGG-G-L 258 (398)
T ss_pred CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEE--EEchhhhC-C-c
Confidence 4999999999999999987 8899999999999999999985311 111122346766 56899985 3 3
Q ss_pred eEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCch
Q 009604 356 LAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 433 (531)
Q Consensus 356 ~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~ 433 (531)
..|++++++++++.+...........++..+..+...|+.+. ...++..+..+++.+.|++.. +|..
T Consensus 259 ~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~------~~~~----- 327 (398)
T PRK03244 259 PIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALG------HPLV----- 327 (398)
T ss_pred ccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcC------CCce-----
Confidence 467777888887766542221222345555555555555442 233444455666777776531 1110
Q ss_pred hhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009604 434 HHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 513 (531)
Q Consensus 434 ~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG 513 (531)
...++.|.+++++++. ....++.+.+...++-++.. ..+.|||++.
T Consensus 328 -----~~v~g~g~~~~i~~~~--~~~~~~~~~l~~~Gv~~~~~---------------------------~~~~iR~~p~ 373 (398)
T PRK03244 328 -----DHVRGRGLLLGIVLTA--PVAKAVEAAAREAGFLVNAV---------------------------APDVIRLAPP 373 (398)
T ss_pred -----eeEeeccEEEEEEEec--cHHHHHHHHHHHCCeEEeec---------------------------CCCEEEEECC
Confidence 0113468899999963 24566777765544332210 1367999988
Q ss_pred CCCHHHHHHHHHHHH
Q 009604 514 VEDFEDLKADVLQAL 528 (531)
Q Consensus 514 lE~~edli~dL~~AL 528 (531)
+..+++.++.+.++|
T Consensus 374 ~~~t~~~i~~~~~~l 388 (398)
T PRK03244 374 LIITDAQVDAFVAAL 388 (398)
T ss_pred CcCCHHHHHHHHHHH
Confidence 744444444444444
No 220
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.76 E-value=9.7e-17 Score=174.83 Aligned_cols=145 Identities=17% Similarity=0.280 Sum_probs=107.2
Q ss_pred cEEEeCChHHHHHHHHHH-----hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccC
Q 009604 217 STVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN 284 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~a-----ll~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~ 284 (531)
+++++++|++|+..++.+ +++|||+|+++.|.|........ +...++.+..++. .|+++|++++++
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~--l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~ 240 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE--LPRYDLEVVHINADEENEWQYPDSELEKLRDP 240 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH--HcCCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence 555666666999988876 68999999999999987554331 2334555555532 367899998887
Q ss_pred CCcEEEEEeCCCCCCCcccC---HHHHHHHHHh--cCCEEEEeCCCCCCccc--ccccc--CCcEEEECCccccccCCCc
Q 009604 285 NNVSLFFTESPTNPFLRCVD---VKLVSDLCHK--KGAIVCIDGTFATPLNQ--KALSL--GADLVLHSATKFIGGHNDV 355 (531)
Q Consensus 285 ~~tklV~lesP~NPtG~v~d---l~~I~~la~~--~gi~lIvD~a~a~~~~~--~~l~~--gaDivv~S~sK~lgg~g~v 355 (531)
++|+|++++|+||||.+++ +++|+++|++ ++++||+||+|...... ..... ...+++.|+||+++..|.+
T Consensus 241 -~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~R 319 (527)
T PRK09275 241 -SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWR 319 (527)
T ss_pred -CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhH
Confidence 4999999999999999998 6677888854 59999999998764321 11111 2358999999999877765
Q ss_pred eEEEEEeChH
Q 009604 356 LAGSISGSGK 365 (531)
Q Consensus 356 ~gG~iv~~~~ 365 (531)
.|+++++++
T Consensus 320 -lG~i~~~~~ 328 (527)
T PRK09275 320 -LGVIALHED 328 (527)
T ss_pred -HhhhhcCch
Confidence 577777764
No 221
>PLN02672 methionine S-methyltransferase
Probab=99.76 E-value=1.9e-16 Score=182.66 Aligned_cols=196 Identities=16% Similarity=0.135 Sum_probs=133.8
Q ss_pred cEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-------CHHHHHHhccCCCcE
Q 009604 217 STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------DMEGLEAALNNNNVS 288 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-------d~e~Le~al~~~~tk 288 (531)
+.|++++|+ +++..++.++++|||+|+++.|+|+..... ++..|+++..++.. |+++|++++++.+.+
T Consensus 755 e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~----a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~ 830 (1082)
T PLN02672 755 TEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSA----AKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKP 830 (1082)
T ss_pred CEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHH----HHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCC
Confidence 456667776 788889999999999999999999875533 44557777766532 578899998753356
Q ss_pred EEEEeCCC-CCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcc-c--------cc-c-cc------CCcEEEECCcc
Q 009604 289 LFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-Q--------KA-L-SL------GADLVLHSATK 347 (531)
Q Consensus 289 lV~lesP~-NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~-~--------~~-l-~~------gaDivv~S~sK 347 (531)
+|++++|+ ||||.+++ +++|+++|++||++||+||+|..... . .+ . .. ..-+++.|+||
T Consensus 831 ~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSK 910 (1082)
T PLN02672 831 WVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLST 910 (1082)
T ss_pred EEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHH
Confidence 89999997 99999987 56777889999999999999863211 0 00 0 01 12378889999
Q ss_pred ccccCCCceEEEEEeC-hHHHHHHHHHhhhcCCC-chHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHcC
Q 009604 348 FIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA-LNPNAAYLIIRG--------MKTLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 348 ~lgg~g~v~gG~iv~~-~~li~~l~~~~~~~G~~-~s~~~a~l~l~~--------L~tl~~r~~~~~~na~~La~~L~~~ 417 (531)
.++..|.+ .|+++++ +++++.++......+.. .+...+..++.. .+.+....+...++++.+.+.|+++
T Consensus 911 kf~lpGLR-IGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 911 ELLSGGHE-FGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC 989 (1082)
T ss_pred hhccHHHH-heeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99888755 6777775 45888887654332221 222222222211 1223333445667788888999876
No 222
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.76 E-value=8.5e-17 Score=175.04 Aligned_cols=145 Identities=17% Similarity=0.249 Sum_probs=107.8
Q ss_pred cEEEeCChHHHHHHHHHH-----hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------------CCHHHHH
Q 009604 217 STVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------------ADMEGLE 279 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~a-----ll~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------------~d~e~Le 279 (531)
+++++.+|++|+..++.+ +++|||+|+++.|.|........ +...|+++..++. .|.++|+
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~--l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~ 234 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE--LPRYDFEVVRIKADEMTEDGTHTWQYPDKELE 234 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH--HhcCCcEEEEeecccccccccccCCCCHHHHH
Confidence 566666667999998876 78999999999999987554332 3334666655542 2568899
Q ss_pred HhccCCCcEEEEEeCCCCCCCcccC---HHHHHHHHHhc--CCEEEEeCCCCCCcc--cccccc--CCcEEEECCccccc
Q 009604 280 AALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK--GAIVCIDGTFATPLN--QKALSL--GADLVLHSATKFIG 350 (531)
Q Consensus 280 ~al~~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~--gi~lIvD~a~a~~~~--~~~l~~--gaDivv~S~sK~lg 350 (531)
+++++ ++|+|++++|+||||.+++ +++|+++|+++ +++||+||+|..... ...... ...+++.|+||+++
T Consensus 235 ~~~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 235 KLRDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFG 313 (521)
T ss_pred HhcCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhcc
Confidence 88876 5999999999999999998 66778889876 999999999875432 111111 23489999999998
Q ss_pred cCCCceEEEEEeChH
Q 009604 351 GHNDVLAGSISGSGK 365 (531)
Q Consensus 351 g~g~v~gG~iv~~~~ 365 (531)
..|.+ .|+++++++
T Consensus 314 ~~G~R-lG~i~~~~~ 327 (521)
T TIGR03801 314 ATGWR-LGTIALHKD 327 (521)
T ss_pred Cchhh-hhhhhcCch
Confidence 77766 577777643
No 223
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.75 E-value=3.1e-16 Score=166.72 Aligned_cols=271 Identities=18% Similarity=0.159 Sum_probs=175.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcc---------cCCcEEEEeCCC----------
Q 009604 215 AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP---------KMGITATVIDPA---------- 273 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l~---------~~Gi~v~~vd~~---------- 273 (531)
.+++++++||++|+..++..+. .++|+|++.++.|++.......... ....++..++.+
T Consensus 96 ~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (413)
T cd00610 96 LDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELA 175 (413)
T ss_pred CCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHH
Confidence 5789999999999999998763 5789999999988885433322111 112234555655
Q ss_pred -CHHHHHHhccC--CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc------ccccccCCcE
Q 009604 274 -DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLGADL 340 (531)
Q Consensus 274 -d~e~Le~al~~--~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~------~~~l~~gaDi 340 (531)
|+++|++.+++ +++++|+++..+|++|.+.+ +++|.++|+++|+++|+||++..... ........|+
T Consensus 176 ~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~ 255 (413)
T cd00610 176 DDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDI 255 (413)
T ss_pred HHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCe
Confidence 78899998876 24788998888888899887 99999999999999999999764211 1112223465
Q ss_pred EEECCccccccCCCceEEEEEeChHHHHHH--HHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHc
Q 009604 341 VLHSATKFIGGHNDVLAGSISGSGKLVTQI--RNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA 416 (531)
Q Consensus 341 vv~S~sK~lgg~g~v~gG~iv~~~~li~~l--~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~~ 416 (531)
+ |++|.+++ | ...|++++++++++.+ ...........++..+..+...++.+. ...++..++.+.+.+.|++
T Consensus 256 ~--t~sK~l~~-g-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~ 331 (413)
T cd00610 256 V--TLGKGLGG-G-LPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRE 331 (413)
T ss_pred E--EEcccccC-c-cccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 4 67799997 4 3467788888888876 222211122334544444444554443 3345555666677766664
Q ss_pred CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcCCCCcccccCCcccccccCcccc
Q 009604 417 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 489 (531)
Q Consensus 417 ~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-------~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s 489 (531)
.... ++. . ....+.|.++++.+... ......|.+.|...++.+..++
T Consensus 332 ~~~~----~~~-~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~------------ 385 (413)
T cd00610 332 LAEK----HPL-V---------GDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG------------ 385 (413)
T ss_pred HHhh----CCc-E---------EEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC------------
Confidence 3210 010 0 00123578999998642 1345667777755454433221
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 490 YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 490 ~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.+.+|+++....+++.++.+.++|++
T Consensus 386 ---------------~~~lR~~~~~~~t~~~i~~~~~~l~~ 411 (413)
T cd00610 386 ---------------GNVIRLLPPLIITEEEIDEGLDALDE 411 (413)
T ss_pred ---------------CCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 35799999998888888888877764
No 224
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.75 E-value=6e-16 Score=167.22 Aligned_cols=195 Identities=23% Similarity=0.214 Sum_probs=136.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---------------CCHHHH
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---------------ADMEGL 278 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---------------~d~e~L 278 (531)
+.++++++++|++|+.+++.++++||| |+++.+.|..+...+ ...|.++.+++. .|+++|
T Consensus 92 ~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i----~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~L 166 (460)
T PRK13238 92 GYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHI----ELNGATAVDLVIDEALDTGSRHPFKGNFDLEKL 166 (460)
T ss_pred CCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHH----HHcCCEEEEEeccccccccccccccCCcCHHHH
Confidence 778899999999999999999999999 888888777654333 234666665542 478999
Q ss_pred HHhccC---CCcEEEEEeCCCCCCC-cccC---HHHHHHHHHhcCCEEEEeCCCCC-----------Ccccccc------
Q 009604 279 EAALNN---NNVSLFFTESPTNPFL-RCVD---VKLVSDLCHKKGAIVCIDGTFAT-----------PLNQKAL------ 334 (531)
Q Consensus 279 e~al~~---~~tklV~lesP~NPtG-~v~d---l~~I~~la~~~gi~lIvD~a~a~-----------~~~~~~l------ 334 (531)
++++++ .+|++|++++|+||+| .+.+ +++|.++|++||++||+|+++.. ++....+
T Consensus 167 e~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~ 246 (460)
T PRK13238 167 EALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIARE 246 (460)
T ss_pred HHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhh
Confidence 999974 2499999999999997 7775 57899999999999999997521 1111111
Q ss_pred -ccCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHHHhh------hcCCCchHHHHHHHHHHHHHH--HHHHHHHH
Q 009604 335 -SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH------VLGGALNPNAAYLIIRGMKTL--HLRVQQQN 404 (531)
Q Consensus 335 -~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~------~~G~~~s~~~a~l~l~~L~tl--~~r~~~~~ 404 (531)
...+|+++.|.+|.+.++ +||+++++ +++.++++.... .+| .++......+..+++.. ....+...
T Consensus 247 ~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~-g~~~~~~~Ala~~l~e~~~~~~~~~~~ 322 (460)
T PRK13238 247 MFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYG-GLAGRDMEALAVGLYEGMDEDYLAYRI 322 (460)
T ss_pred hcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCccccc-CcHHHHHHHHHhhHHHhhChHHHHHHH
Confidence 124899999999986654 27899887 578888776531 122 22333223333344331 23344445
Q ss_pred HHHHHHHHHHHcC
Q 009604 405 STALRMAKILEAH 417 (531)
Q Consensus 405 ~na~~La~~L~~~ 417 (531)
++++.|.+.|.+.
T Consensus 323 ~~~~~l~~~L~~~ 335 (460)
T PRK13238 323 GQVEYLGEGLEEA 335 (460)
T ss_pred HHHHHHHHHHHHC
Confidence 5678899999774
No 225
>PRK08637 hypothetical protein; Provisional
Probab=99.75 E-value=8.5e-16 Score=162.78 Aligned_cols=153 Identities=13% Similarity=0.161 Sum_probs=104.5
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCHHHHHHhcc---CCC
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADMEGLEAALN---NNN 286 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~---~~~ 286 (531)
+++++++++++++.+++.++++|||+|++++|.|......+. ...|.++..++. .|+++++++++ +.+
T Consensus 70 ~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~---~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~ 146 (388)
T PRK08637 70 SLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFN---TRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKG 146 (388)
T ss_pred ceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH---HhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCC
Confidence 344444444599999999999999999999999987553322 234667666543 36899988876 223
Q ss_pred cEEEEEeCCCCCCCcccCH---HHHHHHHHh-----cCCEEEEeCCCCCCccc----cc-c----ccCCc---EEEECCc
Q 009604 287 VSLFFTESPTNPFLRCVDV---KLVSDLCHK-----KGAIVCIDGTFATPLNQ----KA-L----SLGAD---LVLHSAT 346 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl---~~I~~la~~-----~gi~lIvD~a~a~~~~~----~~-l----~~gaD---ivv~S~s 346 (531)
++++++++|+||||.+++. ++|+++|++ ++++||+||+|...... .+ . ...-. +.+.|+|
T Consensus 147 ~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~S 226 (388)
T PRK08637 147 KVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGAT 226 (388)
T ss_pred CEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEecccc
Confidence 6778889999999999874 566666664 89999999997643211 01 1 11112 2345999
Q ss_pred cccccCCCceEEEEEe------ChHHHHHHHH
Q 009604 347 KFIGGHNDVLAGSISG------SGKLVTQIRN 372 (531)
Q Consensus 347 K~lgg~g~v~gG~iv~------~~~li~~l~~ 372 (531)
|.++.+|.+ .|+++. ++++.+.+..
T Consensus 227 K~~~~pGlR-lG~~~~~~~~~~~~~l~~~~~~ 257 (388)
T PRK08637 227 KEEFVWGFR-VGFITFGTKAGSSQTVKEALEK 257 (388)
T ss_pred ccCCCcccc-eEEEEEccccCCcHHHHHHHHH
Confidence 998877765 566653 3567766653
No 226
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.75 E-value=3.1e-16 Score=166.55 Aligned_cols=266 Identities=16% Similarity=0.174 Sum_probs=168.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcc---------CC-CEEEEcCCCccchH-HHHHhhcc------cCC---cEEEEeCCC
Q 009604 214 GAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTR-IFIETVLP------KMG---ITATVIDPA 273 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~---------pG-D~VIv~~~~y~~t~-~~~~~~l~------~~G---i~v~~vd~~ 273 (531)
+.+.+++++||++|+..+++.... +| ++||..+..|++.. ..+ .+.. .++ ..+..++..
T Consensus 96 ~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (396)
T PRK04073 96 GKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAV-SLSSEEEYKRGFGPMLPGIKKIPYG 174 (396)
T ss_pred CCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHH-hhcCCcccccCCCCCCCCceEeCCC
Confidence 346899999999999999886531 34 67887777666533 222 1111 011 123456777
Q ss_pred CHHHHHHhccCCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc------ccccccCCcEEEE
Q 009604 274 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLGADLVLH 343 (531)
Q Consensus 274 d~e~Le~al~~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~------~~~l~~gaDivv~ 343 (531)
|++++++++++ ++++|++|+|+||+|.+.+ +++|.++|+++|+++|+||+|..... ........|+++
T Consensus 175 d~~~l~~~i~~-~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~- 252 (396)
T PRK04073 175 DLEALKAAITP-NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYI- 252 (396)
T ss_pred CHHHHHHhccc-CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEE-
Confidence 89999999987 4999999999999999886 88999999999999999999763211 112223467665
Q ss_pred CCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcCCCce
Q 009604 344 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVK 421 (531)
Q Consensus 344 S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~~~p~v~ 421 (531)
++|.+++.+.. .|++++++++++.+...........++..+..++..|+.+. ...++..+..+++.+.|++..
T Consensus 253 -~sK~lg~gg~~-ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~--- 327 (396)
T PRK04073 253 -LGKALGGGVFP-ISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEID--- 327 (396)
T ss_pred -ecccccCCCCc-ceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc---
Confidence 68999876543 67888898888877542221112235666555555665442 123444455666677776531
Q ss_pred EEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhc
Q 009604 422 RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKY 501 (531)
Q Consensus 422 ~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~ 501 (531)
++.+. ..++.|.++.++++. ....|.+.|...++.+. +
T Consensus 328 ---~~~i~----------~~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~~~----------~---------------- 365 (396)
T PRK04073 328 ---NPMIK----------EVRGRGLFIGVELNE---PARPYCEALKEEGLLCK----------E---------------- 365 (396)
T ss_pred ---CCccc----------ceecceEEEEEEecc---hHHHHHHHHHHCCeEEe----------c----------------
Confidence 12111 113457888998853 34566666654343221 1
Q ss_pred CCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 502 GIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 502 gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
..++.|||+..+-.+++.++.+.++|++
T Consensus 366 -~~~~~iRi~p~l~~t~e~i~~~~~~l~~ 393 (396)
T PRK04073 366 -THETVIRFAPPLVITKEELDWAFEKIKA 393 (396)
T ss_pred -CCCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 0146899997766666666666666653
No 227
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.74 E-value=4e-17 Score=166.60 Aligned_cols=144 Identities=21% Similarity=0.340 Sum_probs=113.6
Q ss_pred CCCcEEEeCCh-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----------CCHHHHHHh
Q 009604 214 GAESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----------ADMEGLEAA 281 (531)
Q Consensus 214 g~e~~i~~sSG-~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----------~d~e~Le~a 281 (531)
|+++++++++| ++++..++.+++++||+|++++++|.+.+..+. ..|+++.+++. .|+++++++
T Consensus 73 ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~----~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~ 148 (294)
T cd00615 73 GAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLV----LSGAVPVYLKPERNPYYGIAGGIPPETFKKA 148 (294)
T ss_pred CCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHH----HCCCEEEEecCccCcccCcCCCCCHHHHHHH
Confidence 66778875666 589999999999999999999999988765443 34777666632 378999999
Q ss_pred ccC-CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc------cccccccCCcEEEECCccccccCCC
Q 009604 282 LNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHND 354 (531)
Q Consensus 282 l~~-~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~------~~~~l~~gaDivv~S~sK~lgg~g~ 354 (531)
+++ .++++|++++| |++|.+.|+++|.++|+++|+++++|++|+..+ .......|+|+++.|+||+++|..
T Consensus 149 l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div~~S~hK~l~g~~- 226 (294)
T cd00615 149 LIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTHKTLPALT- 226 (294)
T ss_pred HHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCcEEEEchhcccchHh-
Confidence 864 24899999999 699999999999999999999999999987532 223345689999999999997653
Q ss_pred ceEEEEEeCh
Q 009604 355 VLAGSISGSG 364 (531)
Q Consensus 355 v~gG~iv~~~ 364 (531)
.+|++..++
T Consensus 227 -~~~~l~~~~ 235 (294)
T cd00615 227 -QGSMIHVKG 235 (294)
T ss_pred -HHHHHHhCC
Confidence 245555544
No 228
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.74 E-value=4.4e-16 Score=165.37 Aligned_cols=193 Identities=15% Similarity=0.146 Sum_probs=123.3
Q ss_pred EeCCh-HHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccC--CCc
Q 009604 220 IMASG-MSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN--NNV 287 (531)
Q Consensus 220 ~~sSG-~~Ai~~al~al--l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~--~~t 287 (531)
++++| ++|+.+++..+ ++|||+|++++|.|......+ +..|+++..++. .|+++++++++. .++
T Consensus 98 ~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~----~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~ 173 (396)
T PRK09257 98 VQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIF----EAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGD 173 (396)
T ss_pred EecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHH----HHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCC
Confidence 55555 59999998665 589999999999998866444 445666665542 378899888752 235
Q ss_pred EEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc-----cc---c-ccC-CcEEEECCccccccCCC
Q 009604 288 SLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KA---L-SLG-ADLVLHSATKFIGGHND 354 (531)
Q Consensus 288 klV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-----~~---l-~~g-aDivv~S~sK~lgg~g~ 354 (531)
+++++++|+||||.+++ +++|+++|++||+++|+|++|...... .+ + ..+ .-+++.|+||.++..|.
T Consensus 174 ~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl 253 (396)
T PRK09257 174 VVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGE 253 (396)
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccc
Confidence 67777999999999997 567888899999999999998654321 11 1 111 34889999999997776
Q ss_pred ceEEEEE--e-ChHHH----HHHHHHhhhcCCCchHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHcC
Q 009604 355 VLAGSIS--G-SGKLV----TQIRNLHHVLGGALNPNAAYLIIRGM----------KTLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 355 v~gG~iv--~-~~~li----~~l~~~~~~~G~~~s~~~a~l~l~~L----------~tl~~r~~~~~~na~~La~~L~~~ 417 (531)
+ .|+++ . +++.+ ..++..........+.....++...+ +.+....++..++++.+.+.|+++
T Consensus 254 R-iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 254 R-VGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred c-ceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5 56665 2 44433 33333222222222333322222222 122223344456677777888765
No 229
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.73 E-value=1.9e-15 Score=160.42 Aligned_cols=236 Identities=19% Similarity=0.161 Sum_probs=146.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc----------CCCEEEEcCCCccchHHHHHhhcc---------cCCcEEEEeCCCCH
Q 009604 215 AESTVIMASGMSASTVMLLALVP----------AGGHIVTTTDCYRKTRIFIETVLP---------KMGITATVIDPADM 275 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~----------pGD~VIv~~~~y~~t~~~~~~~l~---------~~Gi~v~~vd~~d~ 275 (531)
.+.+++++||++|+..++..... .+++|++.+..|++.......... ...-.+..++..|+
T Consensus 88 ~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 167 (400)
T PTZ00125 88 YDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDV 167 (400)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCH
Confidence 46799999999999999986531 346788887777664322111110 00112344566789
Q ss_pred HHHHHhccCCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCc-c-----ccccccCCcEEEECC
Q 009604 276 EGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL-N-----QKALSLGADLVLHSA 345 (531)
Q Consensus 276 e~Le~al~~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~-~-----~~~l~~gaDivv~S~ 345 (531)
++|+++++..++++|++|+++||+|.+.+ +++|.++|++||+++|+||++.... . ........|+++ +
T Consensus 168 ~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~--~ 245 (400)
T PTZ00125 168 EALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVL--L 245 (400)
T ss_pred HHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEE--E
Confidence 99999996335999999999999999987 9999999999999999999975311 1 111122357776 5
Q ss_pred ccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcC----CC
Q 009604 346 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAH----PK 419 (531)
Q Consensus 346 sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~----p~ 419 (531)
+|.+++... ..|++++++++++.+...........++..+..+...++.+.. ..++..+..+.+.+.|++. +.
T Consensus 246 sK~l~~g~~-~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 324 (400)
T PTZ00125 246 GKALSGGLY-PISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPW 324 (400)
T ss_pred cccccCCCc-CcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 699986432 3678888988888775432211122345555555555554431 1233334445555555442 21
Q ss_pred ceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC-CHHHHHHHHHHcCCCCc
Q 009604 420 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDALKIPYI 471 (531)
Q Consensus 420 v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g-~~~~~~~fl~~L~~~~i 471 (531)
+.. .++.|.+++++++. .......|.+.|...++
T Consensus 325 ~~~------------------~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv 359 (400)
T PTZ00125 325 VKE------------------IRGKGLLNAIVFDHSDGVNAWDLCLKLKENGL 359 (400)
T ss_pred eEE------------------EecccEEEEEEEccCcchHHHHHHHHHHHCCe
Confidence 111 12356788888863 22455667777754343
No 230
>PLN02397 aspartate transaminase
Probab=99.73 E-value=9.3e-16 Score=164.43 Aligned_cols=193 Identities=17% Similarity=0.184 Sum_probs=123.1
Q ss_pred EeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccC--CCcEEE
Q 009604 220 IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN--NNVSLF 290 (531)
Q Consensus 220 ~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~~--~~tklV 290 (531)
+.++|..++...+..++.|||+|++++|.|...... ++..|.++..++. .|++.+++.++. .+++++
T Consensus 123 ~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~----~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i 198 (423)
T PLN02397 123 LSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNI----FRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVL 198 (423)
T ss_pred ccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHH----HHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEE
Confidence 444555556666666677999999999999876533 3445766666532 367877777652 248999
Q ss_pred EEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCcccc------c---c-ccC-CcEEEECCccccccCCCce
Q 009604 291 FTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK------A---L-SLG-ADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 291 ~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~------~---l-~~g-aDivv~S~sK~lgg~g~v~ 356 (531)
++++|+||||.+++ +++|+++|+++|++||+||+|....... + . ..+ .-+++.|+||.++..|.+
T Consensus 199 ~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~R- 277 (423)
T PLN02397 199 LHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGER- 277 (423)
T ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCcccc-
Confidence 99999999999987 5567888999999999999986543211 1 1 112 247899999999977766
Q ss_pred EEEEE---eChHHHHHHH----HHhhhcCCCchHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHcC
Q 009604 357 AGSIS---GSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMKT----------LHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 357 gG~iv---~~~~li~~l~----~~~~~~G~~~s~~~a~l~l~~L~t----------l~~r~~~~~~na~~La~~L~~~ 417 (531)
.|+++ +++++++.+. ..........+...+.++...|+. +....++..++++.+.+.|+++
T Consensus 278 vG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 278 VGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred ceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45552 3555554433 322222222333333333322221 2233345556777788888875
No 231
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.72 E-value=1.6e-15 Score=159.47 Aligned_cols=267 Identities=14% Similarity=0.128 Sum_probs=168.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc---c----CCCEEEEcCCCccchHHHHHhh-c--------ccCCcEEEEeCCCCHHH
Q 009604 214 GAESTVIMASGMSASTVMLLALV---P----AGGHIVTTTDCYRKTRIFIETV-L--------PKMGITATVIDPADMEG 277 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all---~----pGD~VIv~~~~y~~t~~~~~~~-l--------~~~Gi~v~~vd~~d~e~ 277 (531)
|.+++++++||++|+.++++.+. . +||+|++.++.|++........ . .....++.+++..|+++
T Consensus 83 g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 162 (379)
T TIGR00707 83 GADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIES 162 (379)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHH
Confidence 45689999999999999887552 2 3799999999987643222111 0 01112334455568999
Q ss_pred HHHhccCCCcEEEEEeCCCCCCCcc-cC---HHHHHHHHHhcCCEEEEeCCCCCCcc-cc-----ccccCCcEEEECCcc
Q 009604 278 LEAALNNNNVSLFFTESPTNPFLRC-VD---VKLVSDLCHKKGAIVCIDGTFATPLN-QK-----ALSLGADLVLHSATK 347 (531)
Q Consensus 278 Le~al~~~~tklV~lesP~NPtG~v-~d---l~~I~~la~~~gi~lIvD~a~a~~~~-~~-----~l~~gaDivv~S~sK 347 (531)
+++.+++ ++++|++++++|++|.. .+ +++|.++|+++|+++|+||+|..... .. ......|++ +++|
T Consensus 163 l~~~~~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK 239 (379)
T TIGR00707 163 LKKAIDD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII--TLAK 239 (379)
T ss_pred HHHHhhh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE--EEcc
Confidence 9999987 49999998777777764 33 78999999999999999999863211 11 112234654 5899
Q ss_pred ccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 348 FIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 348 ~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
.++ .| ...|++++++++++.+...........++..+..+...|+.+. ...++..++.+.+.+.|++... ..
T Consensus 240 ~~~-~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~-- 313 (379)
T TIGR00707 240 GLG-GG-VPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGK--NY-- 313 (379)
T ss_pred ccc-CC-cccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--hC--
Confidence 999 44 3468888888888877653221222345555555554554332 2345555666777777764311 11
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCC
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 505 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~ 505 (531)
+.. ...+.|.+++++++.+ ...|.+.|...++.+..+ ..
T Consensus 314 -~~~----------~~~~~g~~~~~~~~~~---~~~~~~~l~~~Gv~v~~~---------------------------~~ 352 (379)
T TIGR00707 314 -PNK----------EVRGKGLMLGIELEAP---CKDIVKKALEKGLLVNCA---------------------------GP 352 (379)
T ss_pred -CCC----------ccccCceEEEEEecCc---HHHHHHHHHHCCcEEeeC---------------------------CC
Confidence 110 0112467889988643 356666676555444321 13
Q ss_pred CeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 506 NLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 506 ~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+.|||++.+..+++.++.+.++|++
T Consensus 353 ~~lRi~~~~~~t~~~i~~~~~~l~~ 377 (379)
T TIGR00707 353 KVLRFLPPLIITKEEIDEAVSALEE 377 (379)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHH
Confidence 6899998876666667777666654
No 232
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.71 E-value=2.6e-15 Score=159.06 Aligned_cols=268 Identities=16% Similarity=0.147 Sum_probs=164.2
Q ss_pred CCcEEEeCChHHHHHHHHHHh----ccCCC----EEEEcCCCccchHHHHHhhcc--c----C---CcEEEEeCCCCHHH
Q 009604 215 AESTVIMASGMSASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLP--K----M---GITATVIDPADMEG 277 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~al----l~pGD----~VIv~~~~y~~t~~~~~~~l~--~----~---Gi~v~~vd~~d~e~ 277 (531)
.+.+++++||++|+..+++.+ ..+|| +||+.++.|++........-. . + .-.+..++..|+++
T Consensus 88 ~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 167 (389)
T PRK01278 88 ADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEA 167 (389)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHH
Confidence 467999999999999998765 45676 899999988875433211100 0 0 01123345568999
Q ss_pred HHHhccCCCcEEEEEeCCCCCCCccc----CHHHHHHHHHhcCCEEEEeCCCCCCcc-cc-----ccccCCcEEEECCcc
Q 009604 278 LEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN-QK-----ALSLGADLVLHSATK 347 (531)
Q Consensus 278 Le~al~~~~tklV~lesP~NPtG~v~----dl~~I~~la~~~gi~lIvD~a~a~~~~-~~-----~l~~gaDivv~S~sK 347 (531)
+++++++ ++++|++|.++|++|... .+++|.++|++||+++|+||+|..... .. ......|+ .+++|
T Consensus 168 l~~~l~~-~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi--~t~sK 244 (389)
T PRK01278 168 LKAAITP-NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDI--MAVAK 244 (389)
T ss_pred HHHhhCC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCE--EEEeh
Confidence 9999987 599999999988888443 588999999999999999999763211 11 11223455 46899
Q ss_pred ccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 348 FIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 348 ~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
.+++ | ...|++++++++++.+...........++..+..++..++.+.. ..++..++.+.+.+.|++... .+
T Consensus 245 ~l~~-G-~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~----~~ 318 (389)
T PRK01278 245 GIGG-G-FPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVD----RF 318 (389)
T ss_pred hccC-C-cceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHh----hC
Confidence 9984 3 34678888888877665433222223456666666556665421 234444555556565553210 01
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCC
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 505 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~ 505 (531)
|.+ . ...++.|.++.+++.. ...+|.+.|...++.+..| .+
T Consensus 319 ~~~--------~-~~v~g~G~~~~i~~~~---~~~~~~~~l~~~GV~~~p~---------------------------~~ 359 (389)
T PRK01278 319 PDV--------I-EEVRGKGLLLGLKCVV---PNRDLVQALRDEGLLTVGA---------------------------GD 359 (389)
T ss_pred CCc--------e-eeEecccEEEEEEEec---CHHHHHHHHHHCCeEEeec---------------------------CC
Confidence 110 0 0113456788888743 3456666665434332211 14
Q ss_pred CeEEEEecCC----CHHHHHHHHHHHHHh
Q 009604 506 NLVRFSFGVE----DFEDLKADVLQALHA 530 (531)
Q Consensus 506 ~lIRlSvGlE----~~edli~dL~~AL~~ 530 (531)
+.|||++.+- +.++.++.|.++|++
T Consensus 360 ~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 360 NVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred CEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 6899997653 344455555555544
No 233
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.70 E-value=2.2e-15 Score=164.01 Aligned_cols=267 Identities=15% Similarity=0.162 Sum_probs=165.0
Q ss_pred EEEeCChHHHHHHH---HH-HhccCCC----EEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccC
Q 009604 218 TVIMASGMSASTVM---LL-ALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNN 284 (531)
Q Consensus 218 ~i~~sSG~~Ai~~a---l~-all~pGD----~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~ 284 (531)
.++.++|+.+.... ++ .++++|| +|+++.+.|+..... +...|++++.++. .|+++|++++++
T Consensus 132 ~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~----~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~ 207 (481)
T PRK04366 132 TLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPAS----AAMAGFKVVEIPSNEDGLVDLEALKAAVGE 207 (481)
T ss_pred EEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHH----HHHcCCEEEEeecCCCCCcCHHHHHhhccc
Confidence 55556776443332 22 3456776 999999999876643 3456888887754 378999999987
Q ss_pred CCcEEEEEeCCCCCCCcc-cCHHHHHHHHHhcCCEEEEeCCCCCCc--cccccccCCcEEEECCccccccCC---CceEE
Q 009604 285 NNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVLHSATKFIGGHN---DVLAG 358 (531)
Q Consensus 285 ~~tklV~lesP~NPtG~v-~dl~~I~~la~~~gi~lIvD~a~a~~~--~~~~l~~gaDivv~S~sK~lgg~g---~v~gG 358 (531)
+ |++|++++|+ |+|.+ .|+++|+++||++|+++++|+++...+ ..++.++|+|+++.|.||+++++- +.-+|
T Consensus 208 ~-t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G 285 (481)
T PRK04366 208 D-TAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSG 285 (481)
T ss_pred C-CeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCee
Confidence 4 9999999998 99987 589999999999999999999975331 135677899999999999987441 11257
Q ss_pred EEEeChHHHHHHHHHh-------------------hh---cCCCchHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009604 359 SISGSGKLVTQIRNLH-------------------HV---LGGALNPNAA--YLIIRGMKTLHLRVQQQNSTALRMAKIL 414 (531)
Q Consensus 359 ~iv~~~~li~~l~~~~-------------------~~---~G~~~s~~~a--~l~l~~L~tl~~r~~~~~~na~~La~~L 414 (531)
+++.++++.+.+.... +. .+..+....+ |+...|.+.+....++..++++++.+.|
T Consensus 286 ~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L 365 (481)
T PRK04366 286 PVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARL 365 (481)
T ss_pred eeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888777666542100 00 0000011122 2222333444444566677888888888
Q ss_pred HcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEE---EEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCcccccc
Q 009604 415 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVS---FEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW 491 (531)
Q Consensus 415 ~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivs---f~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~ 491 (531)
++...+ .+++ +.. ...++. |.+++ .....+.+.|...++.. +.. ..|.
T Consensus 366 ~~~~~~---~~~~----~~~---------~~~~~~~~~~~~~g--~~~~~v~~~L~~~Gi~~--~~~----~~p~----- 416 (481)
T PRK04366 366 KDIYDL---PYDR----PCM---------HEFVLSGKKLKETG--VRTLDIAKRLLDYGFHP--PTI----YFPL----- 416 (481)
T ss_pred HhhCcc---cCCC----Cee---------EEEEEECccccccC--CCHHHHHHHHHHCCccC--Ccc----cccc-----
Confidence 875222 2221 110 011222 22222 23455666665544322 110 0111
Q ss_pred CCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 492 DLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 492 ~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
..++.+|+|+...++++.|+.|.++|.+
T Consensus 417 -----------~~~~~l~is~~e~~t~edid~l~~~l~~ 444 (481)
T PRK04366 417 -----------IVPEALMIEPTETESKETLDAFIAAMKQ 444 (481)
T ss_pred -----------ccCCeEEEcccCCCCHHHHHHHHHHHHH
Confidence 1246899999998887778877777754
No 234
>PRK07505 hypothetical protein; Provisional
Probab=99.69 E-value=1.3e-14 Score=154.52 Aligned_cols=174 Identities=19% Similarity=0.194 Sum_probs=116.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc----cCCC-EEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcE
Q 009604 214 GAESTVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all----~pGD-~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tk 288 (531)
+. ++++++||++|+..++..+. .+|+ .||+.+..|+++........+ .+.++..++..|+++++++++++ ++
T Consensus 105 ~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~~~d~~~l~~~~~~~-~~ 181 (402)
T PRK07505 105 GA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETIDHNDLDALEDICKTN-KT 181 (402)
T ss_pred CC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeCCCCHHHHHHHHhcC-CC
Confidence 44 78999999999988775432 2233 255555555554322222222 35677888889999999998764 78
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC--------ccccccc---cCCcEEEECCccccccCCCceE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--------LNQKALS---LGADLVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~--------~~~~~l~---~gaDivv~S~sK~lgg~g~v~g 357 (531)
++++++|+||+|.+.++++|.++|+++|++||+||+++.. ....... ....+++.|++|.+++. |
T Consensus 182 ~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~----G 257 (402)
T PRK07505 182 VAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS----G 257 (402)
T ss_pred EEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc----C
Confidence 9999999999999999999999999999999999997421 1111111 12247788999999865 3
Q ss_pred EEEE-eChHHHHHHHHHhhh--cCCCchHHHHHHHHHHHH
Q 009604 358 GSIS-GSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMK 394 (531)
Q Consensus 358 G~iv-~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~L~ 394 (531)
|+++ .++++++.++..... +++.+++..+..+...++
T Consensus 258 g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 258 GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence 6665 477788877654332 333444444444444443
No 235
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.69 E-value=4.8e-15 Score=156.96 Aligned_cols=238 Identities=16% Similarity=0.216 Sum_probs=147.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCC-------CEEEEcCCCccchHHHHHhhcc---------cCCcEEEEeCCCCHHH
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAG-------GHIVTTTDCYRKTRIFIETVLP---------KMGITATVIDPADMEG 277 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pG-------D~VIv~~~~y~~t~~~~~~~l~---------~~Gi~v~~vd~~d~e~ 277 (531)
+.+++++++||++|+.++++.+...+ ++|++..+.|++........-. ...-.+..++..|+++
T Consensus 95 ~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 174 (396)
T PRK02627 95 GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEA 174 (396)
T ss_pred CCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHH
Confidence 45789999999999999998765443 6788888888764322211110 0011223455568999
Q ss_pred HHHhccCCCcEEEEEeCCCCCCCc-ccC---HHHHHHHHHhcCCEEEEeCCCCCCcc------ccccccCCcEEEECCcc
Q 009604 278 LEAALNNNNVSLFFTESPTNPFLR-CVD---VKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLGADLVLHSATK 347 (531)
Q Consensus 278 Le~al~~~~tklV~lesP~NPtG~-v~d---l~~I~~la~~~gi~lIvD~a~a~~~~------~~~l~~gaDivv~S~sK 347 (531)
+++++++ ++++|++++++||+|. +.+ +++|.++|+++|++||+||+|..... ........|++ +++|
T Consensus 175 l~~~i~~-~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~--t~sK 251 (396)
T PRK02627 175 LKAAITD-KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIM--TLAK 251 (396)
T ss_pred HHHhcCC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEE--EEcc
Confidence 9999976 4999999999999984 443 78999999999999999999763211 11112224554 5889
Q ss_pred ccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 348 FIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 348 ~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
.+++ | ...|++++++++++.+...........++..+..+...++.+.. .+++..++.+.+.+.|.+... .+
T Consensus 252 ~~~~-G-~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~ 325 (396)
T PRK02627 252 GLGG-G-VPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLE----KY 325 (396)
T ss_pred hhhC-C-cccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH----hC
Confidence 9994 4 45788888888877765422222223456666665556654432 233444455555555543210 01
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCccc
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 473 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iav 473 (531)
|.. ....+.|.+++++++. ...+|.+.|...++.+
T Consensus 326 ~~~----------~~~~~~g~~~~i~~~~---~~~~~~~~l~~~Gv~v 360 (396)
T PRK02627 326 PGI----------KEVRGLGLMIGIELDR---PAAEIVKKALEKGLLI 360 (396)
T ss_pred CCe----------eeeccCcEEEEEEecC---cHHHHHHHHHHCCeEE
Confidence 111 0113457889998832 3456776664434433
No 236
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.69 E-value=4.1e-15 Score=159.24 Aligned_cols=270 Identities=15% Similarity=0.018 Sum_probs=173.2
Q ss_pred cEEE--eCChHHHHHHHHHHhc--------cCC-----CEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------CCH
Q 009604 217 STVI--MASGMSASTVMLLALV--------PAG-----GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ADM 275 (531)
Q Consensus 217 ~~i~--~sSG~~Ai~~al~all--------~pG-----D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~d~ 275 (531)
+.++ +++|++|+.+++.+.. +.| -+|+++..+|.+..... +..|++++.++. .|+
T Consensus 101 ~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~----~~lg~~v~~i~~d~~~~~vd~ 176 (431)
T TIGR01788 101 EAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFA----RYFDVELREVPMDPGRYVIDP 176 (431)
T ss_pred CCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHH----HHcCceeEEEecCCCceeeCH
Confidence 4444 5788899999886542 112 37999999998866433 334666665542 278
Q ss_pred HHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhc------CCEEEEeCCCCCCc--------cccccccCCcEE
Q 009604 276 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATPL--------NQKALSLGADLV 341 (531)
Q Consensus 276 e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~------gi~lIvD~a~a~~~--------~~~~l~~gaDiv 341 (531)
++|+++|+++ |.+|.+...+|.+|.+.|+++|+++|+++ |+++++|.+|+.+. ..+....++|.+
T Consensus 177 ~~L~~~i~~~-t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSi 255 (431)
T TIGR01788 177 EQVVEAVDEN-TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSI 255 (431)
T ss_pred HHHHHHHhhC-CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEE
Confidence 9999999885 89999999999999999999999999999 99999999988321 111123478999
Q ss_pred EECCcccc-ccCCCceEEEEEeChH--HHHHHHHHhhhcC----------CCc--hHHHHHHHHHH--HHHHHHHHHHHH
Q 009604 342 LHSATKFI-GGHNDVLAGSISGSGK--LVTQIRNLHHVLG----------GAL--NPNAAYLIIRG--MKTLHLRVQQQN 404 (531)
Q Consensus 342 v~S~sK~l-gg~g~v~gG~iv~~~~--li~~l~~~~~~~G----------~~~--s~~~a~l~l~~--L~tl~~r~~~~~ 404 (531)
..|.||++ ++.| .|+++.+++ +.+.+.......+ ... .....|+.++. ...+...+++..
T Consensus 256 s~s~HK~~~~P~g---~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~ 332 (431)
T TIGR01788 256 NVSGHKYGLVYPG---VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSL 332 (431)
T ss_pred EECchhccCCCCC---cEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHH
Confidence 99999987 6555 577776543 2222211000111 111 12334554433 345566677788
Q ss_pred HHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCCCcccccCCcccc
Q 009604 405 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAPSFGGCESI 481 (531)
Q Consensus 405 ~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~---~~~~~~fl~~L~~~~iavS~Gg~~Sl 481 (531)
+.++++.+.|++.|.++-+ .|. | ..++++|.+++. ......+.+.|+..++.+..
T Consensus 333 ~la~~l~~~L~~~~~~el~-~~~----~-----------~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~------ 390 (431)
T TIGR01788 333 DVARYLAEEIAKLGPFEII-SDG----S-----------GIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPA------ 390 (431)
T ss_pred HHHHHHHHHHHhCCCEEEe-eCC----C-----------CceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccC------
Confidence 8899999999988876433 221 1 247999999752 12345566666544432210
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHHh
Q 009604 482 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 530 (531)
Q Consensus 482 i~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG----lE~~edli~dL~~AL~~ 530 (531)
...|... . ..-.+|+++- .+..+++++||..++..
T Consensus 391 ~~~p~~~------------~--~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (431)
T TIGR01788 391 YTLPKNA------------E--DIVVMRIVVREGFSRDLAELLIEDIEAALAY 429 (431)
T ss_pred CCCCCcc------------C--CeEEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 0011111 0 1246899884 34567888888887764
No 237
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.69 E-value=7.2e-15 Score=157.69 Aligned_cols=229 Identities=16% Similarity=0.127 Sum_probs=152.3
Q ss_pred eCChHHHHHHHHHHhccC-------------------------------CCEEEEcCCCccchHH------HHHhh--cc
Q 009604 221 MASGMSASTVMLLALVPA-------------------------------GGHIVTTTDCYRKTRI------FIETV--LP 261 (531)
Q Consensus 221 ~sSG~~Ai~~al~all~p-------------------------------GD~VIv~~~~y~~t~~------~~~~~--l~ 261 (531)
.-||+.|+..++.++++| ||+|+..+..+++... +.... ..
T Consensus 117 p~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~ 196 (493)
T PRK13580 117 PHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQR 196 (493)
T ss_pred CCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeE
Confidence 679999999999999987 8999988777665311 00000 11
Q ss_pred cCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc--------cc
Q 009604 262 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--------KA 333 (531)
Q Consensus 262 ~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~--------~~ 333 (531)
.+|+.-. -...|++++++.+++. +++|++...+|. +...|+++|.++|+++|+++++|++++.++.. .+
T Consensus 197 ~y~vd~~-~g~iD~d~l~~~~~~~-~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~ 273 (493)
T PRK13580 197 SYGVDPD-TGLLDYDEIAALAREF-KPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDP 273 (493)
T ss_pred ecccCcc-cCccCHHHHHHHHhhc-CCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCC
Confidence 1222200 0124889999999885 777777788887 55889999999999999999999998776432 23
Q ss_pred cccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh-hhcCCCchHHHHHHHHHHHHHH-----HHHHHHHHHHH
Q 009604 334 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTA 407 (531)
Q Consensus 334 l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~-~~~G~~~s~~~a~l~l~~L~tl-----~~r~~~~~~na 407 (531)
. .++|+++.|+||++.|+. ||++++++++++.+.... ..+|+.+.+..+..+.. ++.+ ..+.++..+|+
T Consensus 274 ~-~~~D~vtgT~hKaL~GP~---GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avA-l~e~~~~ef~~y~~~l~~Na 348 (493)
T PRK13580 274 V-PHADIVTTTTHKTLRGPR---GGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVA-LAEARTPEFQKYAQQVVDNA 348 (493)
T ss_pred C-CCCcEEEeCChhhccCCC---eEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHH-HHHHhCccHHHHHHHHHHHH
Confidence 2 369999999999996553 799999998888875332 34566666654444332 3222 34677888999
Q ss_pred HHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccc
Q 009604 408 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 474 (531)
Q Consensus 408 ~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS 474 (531)
+.|++.|.+.. .. +...+- -..++.+.+.+.......+-+.|...+|-++
T Consensus 349 ~~La~~L~~~G-~~-vv~ggT---------------dshIV~V~lg~~~~~g~~a~~~L~e~GI~vn 398 (493)
T PRK13580 349 RALAEGFLKRG-AR-LVTGGT---------------DNHLVLIDVTSFGLTGRQAESALLDAGIVTN 398 (493)
T ss_pred HHHHHHHHhcC-CC-ccCCCC---------------CCCEEEEEeCCHHHHHHHHHHHHHHCCeEEc
Confidence 99999998753 11 111111 1358899985422223344456655554443
No 238
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.69 E-value=4.7e-15 Score=158.60 Aligned_cols=196 Identities=17% Similarity=0.179 Sum_probs=136.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---------------CCHHHH
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---------------ADMEGL 278 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---------------~d~e~L 278 (531)
|.++++++++|++|+.+++.++++|||+| ++.+.|..+...+ ...|.++.+++. .|+++|
T Consensus 67 g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i----~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~L 141 (431)
T cd00617 67 GFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHI----EANGAVPVDLVIDEAHDAQELIPFKGNIDVAKL 141 (431)
T ss_pred CCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHH----HhCCCEeEEEecccccccccccCCCCCcCHHHH
Confidence 78899999999999999999999999987 5777776654333 233555554432 478999
Q ss_pred HHhccCC---CcEEEEEeCCCCCC-CcccC---HHHHHHHHHhcCCEEEEeCCCCC-----------Ccccccc------
Q 009604 279 EAALNNN---NVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT-----------PLNQKAL------ 334 (531)
Q Consensus 279 e~al~~~---~tklV~lesP~NPt-G~v~d---l~~I~~la~~~gi~lIvD~a~a~-----------~~~~~~l------ 334 (531)
+++|+++ ++++|++++|+||+ |.+++ +++|.++|++||++||.|++... ++.....
T Consensus 142 e~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e 221 (431)
T cd00617 142 EKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIARE 221 (431)
T ss_pred HHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHH
Confidence 9999853 38899999999998 88886 45789999999999999999431 1111111
Q ss_pred -ccCCcEEEECCccccccCCCceEEEEEeCh-HHHHHHHHHhhh-----cCCCchHHHHHHHHHHHHHH--HHHHHHHHH
Q 009604 335 -SLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----LGGALNPNAAYLIIRGMKTL--HLRVQQQNS 405 (531)
Q Consensus 335 -~~gaDivv~S~sK~lgg~g~v~gG~iv~~~-~li~~l~~~~~~-----~G~~~s~~~a~l~l~~L~tl--~~r~~~~~~ 405 (531)
....|.+..|++|-.+.+ +||++++++ +++++++..... ..+.++......+..+|+.. ...+++..+
T Consensus 222 ~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~ 298 (431)
T cd00617 222 MFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVE 298 (431)
T ss_pred hhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 124788999999977654 388999986 588887753311 11223333322323355332 344555566
Q ss_pred HHHHHHHHHHcC
Q 009604 406 TALRMAKILEAH 417 (531)
Q Consensus 406 na~~La~~L~~~ 417 (531)
+++.|.+.|++.
T Consensus 299 ~r~~l~~~L~~~ 310 (431)
T cd00617 299 QVRYLGDRLDEA 310 (431)
T ss_pred HHHHHHHHHHHC
Confidence 778899999876
No 239
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.68 E-value=9.3e-16 Score=141.16 Aligned_cols=144 Identities=22% Similarity=0.266 Sum_probs=116.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCC-----H--HHHHHhccCCC
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD-----M--EGLEAALNNNN 286 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d-----~--e~Le~al~~~~ 286 (531)
+.+.++++++|++|+.+++.++.++|++|+++.+.|.+... ..+...|.++..++..+ . +.+++.....+
T Consensus 16 ~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 92 (170)
T cd01494 16 GNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDAGYGGLDVAILEELKAKPN 92 (170)
T ss_pred CCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCCCccchhhhhhhhccccCc
Confidence 35678899999999999999999899999999999988763 23456688888776431 1 24544443335
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc----cccccCCcEEEECCccccccCCCceEEEEEe
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGADLVLHSATKFIGGHNDVLAGSISG 362 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~----~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~ 362 (531)
+++|++++++|++|...|+++|.++|+++|+++|+|+++..+... .....++|+++.|++|++++.+ +|+++.
T Consensus 93 ~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~---~G~l~~ 169 (170)
T cd01494 93 VALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKNLGGEG---GGVVIV 169 (170)
T ss_pred eEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcccccCCCc---eEEEEe
Confidence 899999999999999999999999999999999999998765443 3555689999999999999854 788875
Q ss_pred C
Q 009604 363 S 363 (531)
Q Consensus 363 ~ 363 (531)
+
T Consensus 170 ~ 170 (170)
T cd01494 170 K 170 (170)
T ss_pred C
Confidence 3
No 240
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=6.2e-15 Score=142.46 Aligned_cols=269 Identities=14% Similarity=0.154 Sum_probs=181.7
Q ss_pred CcEEEeCChH-HHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCC-Cc
Q 009604 216 ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN-NV 287 (531)
Q Consensus 216 e~~i~~sSG~-~Ai~~al~all~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~-~t 287 (531)
.+-|+++-|+ +.|.++++..+.|| ++|+.-.|+|.-.. --....+++|..++. .+.|++.+.+... .+
T Consensus 86 ~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~i 161 (375)
T KOG0633|consen 86 SDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKI 161 (375)
T ss_pred ccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE----EEeecCCceEEEecCCCCccccHHHHHHHHhccccc
Confidence 4678889998 89999999999999 88999888886421 124556788877763 2788888887643 58
Q ss_pred EEEEEeCCCCCCCcccCHHHHHHHHHhc-CCEEEEeCCCCCCcc-ccc----cccCCcEEEECCccccccCCCceEEEEE
Q 009604 288 SLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLN-QKA----LSLGADLVLHSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl~~I~~la~~~-gi~lIvD~a~a~~~~-~~~----l~~gaDivv~S~sK~lgg~g~v~gG~iv 361 (531)
|++|+++|+||||.....+.|.++.+.. +.+|++||+|-.+.. ... .++..-+++.++||.+|-.| +..|+-+
T Consensus 162 K~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAG-iRvG~~~ 240 (375)
T KOG0633|consen 162 KCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAG-IRVGYGA 240 (375)
T ss_pred eEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcce-eEeeccc
Confidence 9999999999999999998898888754 789999999765432 111 12223378899999998665 3466666
Q ss_pred eChHHHHHHHHHhhhcCCCchH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhh
Q 009604 362 GSGKLVTQIRNLHHVLGGALNP-NAAYLII--RGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIAT 438 (531)
Q Consensus 362 ~~~~li~~l~~~~~~~G~~~s~-~~a~l~l--~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~ 438 (531)
.+.++.+.+......+...... ..|..++ ..++.++.-...+.+...+|.+.|.+.|.+.. ||+-
T Consensus 241 ~~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~--~~gg---------- 308 (375)
T KOG0633|consen 241 FPLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLND--YPGG---------- 308 (375)
T ss_pred ccHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccC--CCCc----------
Confidence 7777877777665544433222 2222222 24566666666677788888888888776654 4441
Q ss_pred hhcCCcccEEEEEEcCCH-HHHHHHHHH-cCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-
Q 009604 439 QQMTGFGGVVSFEVDGDL-TATIKFIDA-LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE- 515 (531)
Q Consensus 439 ~~~~g~g~ivsf~l~g~~-~~~~~fl~~-L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE- 515 (531)
...+++-+++.|+. ..+.+++.. +...++-+.+-|.+- | -.|++|+++|.+
T Consensus 309 ----~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~---------------------~-c~G~lRitvGt~E 362 (375)
T KOG0633|consen 309 ----SDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEE---------------------G-CKGYLRITVGTPE 362 (375)
T ss_pred ----ccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCcc---------------------c-cceeEEEEcCCcc
Confidence 13578889987542 334444433 334444444433321 1 268999999975
Q ss_pred CHHHHHHHHHHH
Q 009604 516 DFEDLKADVLQA 527 (531)
Q Consensus 516 ~~edli~dL~~A 527 (531)
+..-|+.-|.+-
T Consensus 363 entvL~k~~K~~ 374 (375)
T KOG0633|consen 363 ENTVLMKCLKQF 374 (375)
T ss_pred cchHHHHHHHhh
Confidence 455666666553
No 241
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.67 E-value=2.9e-14 Score=148.43 Aligned_cols=197 Identities=17% Similarity=0.226 Sum_probs=150.4
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCC-CcEEE
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN-NVSLF 290 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~-~tklV 290 (531)
-.++.+||+.++..++..+++|||+|++......+-+ +.++++++|.++..++. .|+++++++|+++ +.++|
T Consensus 58 ~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R--~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V 135 (383)
T COG0075 58 VVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGER--FAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAV 135 (383)
T ss_pred EEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEE
Confidence 3667799999999999999999999999887766643 55778899999888764 4899999999843 47888
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCC-CccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHH
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ 369 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~-~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~ 369 (531)
.+.+--..||...|+++|+++|++||+++|||.+-+. ....+..++|+|+++.+..|.++++.+ .|++..+++.++.
T Consensus 136 ~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPG--la~v~~S~~a~e~ 213 (383)
T COG0075 136 AVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPG--LAFVAVSERALEA 213 (383)
T ss_pred EEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCc--cceeEECHHHHHH
Confidence 8877777889999999999999999999999999653 456677889999999999999997764 4777777766555
Q ss_pred HHH------------Hhhhc---C---CCchHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHcC
Q 009604 370 IRN------------LHHVL---G---GALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 370 l~~------------~~~~~---G---~~~s~~~a~l~l~~L~-----tl~~r~~~~~~na~~La~~L~~~ 417 (531)
+.. +...+ + .+.+....+.+..+|+ -++.|.++|.++++.+.+.+++.
T Consensus 214 ~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al 284 (383)
T COG0075 214 IEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL 284 (383)
T ss_pred HhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 431 11111 2 2233333333333332 25788899999999999999875
No 242
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.67 E-value=7.8e-15 Score=155.05 Aligned_cols=263 Identities=13% Similarity=0.034 Sum_probs=164.3
Q ss_pred CcEEEeC-ChHHHHHHHHHHhccC-CCEEEEcCCCccchHHHHHhhcccCCc-EEEEeCCC-----CHHHHHHhccCCCc
Q 009604 216 ESTVIMA-SGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGI-TATVIDPA-----DMEGLEAALNNNNV 287 (531)
Q Consensus 216 e~~i~~s-SG~~Ai~~al~all~p-GD~VIv~~~~y~~t~~~~~~~l~~~Gi-~v~~vd~~-----d~e~Le~al~~~~t 287 (531)
.++++++ ||+.++++++..++++ ++.|++ ...|+.. +.....++.|+ +++.+... |+++ ++. +
T Consensus 67 ~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~--~~~~~~~~~g~~~v~~~~~~~g~~~d~~~----i~~--~ 137 (378)
T PRK03080 67 YEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSK--WATDVVKQLKLEDPRVLEADYGSLPDLSA----VDF--D 137 (378)
T ss_pred ceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHH--HHHHHHhhcCCCCceEeccCCCCCCCHhh----cCC--C
Confidence 3577775 8999999999999875 455555 4566652 33223356677 77766532 3443 332 5
Q ss_pred EEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-ccccccCCcEEEECCcccccc-CCCceEEEEEeChH
Q 009604 288 SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGG-HNDVLAGSISGSGK 365 (531)
Q Consensus 288 klV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~~l~~gaDivv~S~sK~lgg-~g~v~gG~iv~~~~ 365 (531)
++|.+.+..|.||.+.|+++|++ |++|+++++|.+++.+.. .+..+ +|+++.|.+|++++ +| .|+++.+++
T Consensus 138 ~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K~l~~P~G---~g~l~v~~~ 210 (378)
T PRK03080 138 RDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYTFSWQKVLGGEGG---HGMAILSPR 210 (378)
T ss_pred CCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEEEehhhhCCCCCc---eEEEEECHH
Confidence 67899999999999999999999 889999999999876532 33332 79999999999977 55 689999988
Q ss_pred HHHHHHHHh------------------h-h-cCC---CchHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHc
Q 009604 366 LVTQIRNLH------------------H-V-LGG---ALNPNAAYLIIRGMKTL------HLRVQQQNSTALRMAKILEA 416 (531)
Q Consensus 366 li~~l~~~~------------------~-~-~G~---~~s~~~a~l~l~~L~tl------~~r~~~~~~na~~La~~L~~ 416 (531)
.++++.... . . -+. +.+....+.+..+++.+ +.+.+++.+.++.+.++|++
T Consensus 211 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~ 290 (378)
T PRK03080 211 AVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEK 290 (378)
T ss_pred HHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 877655311 0 0 011 12222222223344433 23344555666777777877
Q ss_pred CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCH
Q 009604 417 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 495 (531)
Q Consensus 417 ~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~ 495 (531)
.+.+. +..+ .+.+ ..+.+++|.+++. .....+++..|...++.+..|+...
T Consensus 291 ~~~~~-~~~~----~~~~--------~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~~--------------- 342 (378)
T PRK03080 291 TPWAT-PLVA----DPAT--------RSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPYRD--------------- 342 (378)
T ss_pred CCCcc-cccC----Cccc--------cCccEEEEEcCCchHHHHHHHHHHHHHcCCeeccccccC---------------
Confidence 65432 1111 1110 1346899988751 0111234444432244444443210
Q ss_pred HHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 496 SERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 496 ~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.++.+|+|++..++++.|+.|.++|++
T Consensus 343 --------~~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 343 --------APNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred --------CCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 146799999999988888888888764
No 243
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.66 E-value=2.6e-14 Score=150.56 Aligned_cols=261 Identities=18% Similarity=0.153 Sum_probs=165.4
Q ss_pred CcEEEeCChHHHHHHHHHHh-ccCC-CEEEEcCCCccch-HHHHHhhccc------C---CcEEEEeCCCCHHHHHHhcc
Q 009604 216 ESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKT-RIFIETVLPK------M---GITATVIDPADMEGLEAALN 283 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al-l~pG-D~VIv~~~~y~~t-~~~~~~~l~~------~---Gi~v~~vd~~d~e~Le~al~ 283 (531)
+.+++++||++|+..+++.. ..+| ++|++.+..|++. +..+. .... + ...+.+++..|++++++.++
T Consensus 87 ~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 165 (377)
T PRK02936 87 DLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMS-ATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN 165 (377)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhh-ccCCccccccCCCCCCCceEeCCCCHHHHHHhcc
Confidence 57899999999999999843 2244 5688887777653 32221 1100 0 11334566678999999998
Q ss_pred CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc-ccc-----cccCCcEEEECCccccccCC
Q 009604 284 NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-QKA-----LSLGADLVLHSATKFIGGHN 353 (531)
Q Consensus 284 ~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~-~~~-----l~~gaDivv~S~sK~lgg~g 353 (531)
++ +++|++|.+.++.|...+ +++|.++|++||+++|+||+|..... ..+ .....|++ +++|.+++ |
T Consensus 166 ~~-~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~-G 241 (377)
T PRK02936 166 EE-VAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIV--TVAKGLGN-G 241 (377)
T ss_pred CC-eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEE--EEcccccC-C
Confidence 74 999999999998887643 89999999999999999999753211 111 11224654 68999984 3
Q ss_pred CceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcC----CCceEEeCCC
Q 009604 354 DVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAH----PKVKRVHYPG 427 (531)
Q Consensus 354 ~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~~~----p~v~~V~~pg 427 (531)
..+|++++++++.+.+...........++..+..++..++.+. ..+++..++.+.+.+.|++. +.+..+
T Consensus 242 -~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v---- 316 (377)
T PRK02936 242 -IPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNI---- 316 (377)
T ss_pred -CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE----
Confidence 4578889998888777543222222345666666666666542 34555666677777777652 221111
Q ss_pred CCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009604 428 LKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 507 (531)
Q Consensus 428 l~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~l 507 (531)
++.|.++++++... ...+.+.|...++.+..+ ..+.
T Consensus 317 --------------~~~g~~~~i~~~~~---~~~~~~~l~~~gv~v~~~---------------------------g~~~ 352 (377)
T PRK02936 317 --------------RGKGLMIGIECTEE---VAPVIEQLREEGLLVLSA---------------------------GPNV 352 (377)
T ss_pred --------------eecceEEEEEecch---HHHHHHHHHHCCeEEecC---------------------------CCCE
Confidence 22467899998642 456666665444322111 1368
Q ss_pred EEEEecCCCHHHHHHHHHHHHHh
Q 009604 508 VRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 508 IRlSvGlE~~edli~dL~~AL~~ 530 (531)
|||+..+..+++.++.+.+.|++
T Consensus 353 lRi~p~~~~~~~~i~~~i~~l~~ 375 (377)
T PRK02936 353 IRLLPPLVVTKEELDQAVYLLKK 375 (377)
T ss_pred EEEECCcccCHHHHHHHHHHHHH
Confidence 99997655556666666665543
No 244
>PLN03032 serine decarboxylase; Provisional
Probab=99.65 E-value=4.3e-14 Score=148.65 Aligned_cols=193 Identities=17% Similarity=0.156 Sum_probs=139.3
Q ss_pred EEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe--CC---CCHHHHHHhccCC--CcE
Q 009604 218 TVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI--DP---ADMEGLEAALNNN--NVS 288 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~v--d~---~d~e~Le~al~~~--~tk 288 (531)
.+++++||+|+.+++.+.. .++++|+++...|.+.....+ .+|+++..+ +. .|+++|+++|+++ ++.
T Consensus 88 G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~----~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~ 163 (374)
T PLN03032 88 GYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR----MYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPA 163 (374)
T ss_pred EEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHH----HcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCE
Confidence 3888899999998887543 356799999999998765442 233333333 32 3899999999763 377
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcC-----CEEEEeCCCCCCcc-c---c---ccccCCcEEEECCccccc-cCCCc
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKG-----AIVCIDGTFATPLN-Q---K---ALSLGADLVLHSATKFIG-GHNDV 355 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~g-----i~lIvD~a~a~~~~-~---~---~l~~gaDivv~S~sK~lg-g~g~v 355 (531)
+|++...+|++|.+.|+++|+++|+++| +++++|.+++.+.. . . ....++|.++.|.||+++ +.+
T Consensus 164 lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g-- 241 (374)
T PLN03032 164 ILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMP-- 241 (374)
T ss_pred EEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcC--
Confidence 8888899999999999999999999997 58999999875422 1 0 112469999999999998 665
Q ss_pred eEEEEEeChHHHHHHHHHh--------hhcCCC--chHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcC
Q 009604 356 LAGSISGSGKLVTQIRNLH--------HVLGGA--LNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 356 ~gG~iv~~~~li~~l~~~~--------~~~G~~--~s~~~a~l~l~--~L~tl~~r~~~~~~na~~La~~L~~~ 417 (531)
.|+++.+++.++.+.... ...|+. ......|..++ |.+.+..++++..++++++.+.|++.
T Consensus 242 -~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 242 -CGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA 314 (374)
T ss_pred -eEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 688887776665443211 122332 22455565543 45677788899999999999999875
No 245
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.65 E-value=5.3e-14 Score=149.86 Aligned_cols=269 Identities=14% Similarity=0.172 Sum_probs=163.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--------cCCCEEEEcCCCccchHH-HHH--------hhcccCCcEEEEeCCCCHH
Q 009604 214 GAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRI-FIE--------TVLPKMGITATVIDPADME 276 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all--------~pGD~VIv~~~~y~~t~~-~~~--------~~l~~~Gi~v~~vd~~d~e 276 (531)
+.+.+++++||++|+..+++... ...+.|+..+..|++... .+. ..+......+..++..|++
T Consensus 96 ~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 175 (403)
T PRK05093 96 FAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLA 175 (403)
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHH
Confidence 34689999999999999987431 123467766666666432 111 1111122345667788999
Q ss_pred HHHHhccCCCcEEEEEeCCCCCCCccc--C---HHHHHHHHHhcCCEEEEeCCCCCCcc-ccc-----cccCCcEEEECC
Q 009604 277 GLEAALNNNNVSLFFTESPTNPFLRCV--D---VKLVSDLCHKKGAIVCIDGTFATPLN-QKA-----LSLGADLVLHSA 345 (531)
Q Consensus 277 ~Le~al~~~~tklV~lesP~NPtG~v~--d---l~~I~~la~~~gi~lIvD~a~a~~~~-~~~-----l~~gaDivv~S~ 345 (531)
++++.+.+ ++++|++| |.|++|.+. + +++|.++|++||+++|+||+|..... ... .....| +.|+
T Consensus 176 ~l~~~l~~-~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd--i~s~ 251 (403)
T PRK05093 176 AVKAVIDD-HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD--ILTS 251 (403)
T ss_pred HHHHHhcC-CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC--EEEe
Confidence 99999976 49999999 666776553 3 88999999999999999999763211 111 122345 4578
Q ss_pred ccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcCCCceEE
Q 009604 346 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRV 423 (531)
Q Consensus 346 sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~~~p~v~~V 423 (531)
+|.+++ | ...|++++++++++.+...........++..++.++..|+.+. ...++..++.+.+.+.|++...
T Consensus 252 sK~l~~-G-~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~---- 325 (403)
T PRK05093 252 AKALGG-G-FPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQ---- 325 (403)
T ss_pred cccccC-C-cceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----
Confidence 999984 4 4578888888888877542222222345555555555554442 2345555667777777765421
Q ss_pred eCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcC
Q 009604 424 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 502 (531)
Q Consensus 424 ~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~g 502 (531)
.++.. ....+.|.+++++++.+ .....+|.+.|...++.+..+
T Consensus 326 ~~~~~----------~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-------------------------- 369 (403)
T PRK05093 326 KYGVF----------SEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVA-------------------------- 369 (403)
T ss_pred hCCCe----------EeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecC--------------------------
Confidence 01000 01123577888988643 124567777775444332211
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 503 IMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 503 i~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
.++.|||++.+..+++.++.+.+.|+
T Consensus 370 -g~~~lRl~~~~~~~~~~i~~~~~~l~ 395 (403)
T PRK05093 370 -GPDVLRFAPSLVIEEADIDEGLARFE 395 (403)
T ss_pred -CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 13689998877644544554444443
No 246
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.64 E-value=1.6e-14 Score=151.47 Aligned_cols=261 Identities=11% Similarity=0.046 Sum_probs=162.4
Q ss_pred CcEEEeCC-hHHHHHHHHHHhcc---CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC------C-HHHHHHhccC
Q 009604 216 ESTVIMAS-GMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA------D-MEGLEAALNN 284 (531)
Q Consensus 216 e~~i~~sS-G~~Ai~~al~all~---pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~------d-~e~Le~al~~ 284 (531)
++++++++ ||+++++++..+++ +||+|++. .|. ..+ ...+++.|+++++++.. + ++..+..+++
T Consensus 63 ~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g--~~~--~~~-~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~ 137 (355)
T cd00611 63 YKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTG--AWS--AKA-AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAP 137 (355)
T ss_pred ceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECC--HHH--HHH-HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCC
Confidence 45777766 88999999999987 66666642 111 111 23557778888877642 3 3333345555
Q ss_pred CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeC
Q 009604 285 NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGS 363 (531)
Q Consensus 285 ~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~ 363 (531)
++++|.+.+..|.||...+ ++++.+|++++||.+++.+. ..+..+++ +++.|.+|.+|++| .|+++.+
T Consensus 138 -~~~lV~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~lGP~G---~g~l~~~ 206 (355)
T cd00611 138 -DAAYVHYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNLGPAG---VTVVIVR 206 (355)
T ss_pred -CCCEEEEeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHHhC--EEEeecccccCCCc---eEEEEEC
Confidence 5999999999999999743 45566999999999987653 34444444 56677999999887 6888888
Q ss_pred hHHHHHHHHH-------hh--hc---CCCchHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 364 GKLVTQIRNL-------HH--VL---GGALNPNAAYLIIRGMKTL------HLRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 364 ~~li~~l~~~-------~~--~~---G~~~s~~~a~l~l~~L~tl------~~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
+++++++... .. .. -.+.+....+.+..+++.+ +.+.++..+.++.+.++|++.|++ |
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl----~ 282 (355)
T cd00611 207 KDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF----Y 282 (355)
T ss_pred HHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc----c
Confidence 8877654421 00 00 1233333444444555544 333455567777888888877653 2
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCC
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 505 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~ 505 (531)
... ..+.. ..+.+++|.+++. ....++++.+...++....| |. ..
T Consensus 283 ~~~-~~~~~--------rs~~vvsf~~~~~-~l~~~~~~~~~r~G~~~~~~-------------~~------------~~ 327 (355)
T cd00611 283 RGP-VDKRA--------RSRMNVPFRLGKE-ELEKEFLKEAEAAGMIGLKG-------------HR------------SV 327 (355)
T ss_pred ccC-CCHHH--------cCceEEEEEcCCh-hhhHHHHHHHHHCCCcccCC-------------Cc------------cc
Confidence 111 11111 1345799998753 11234434333223211111 11 13
Q ss_pred CeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 506 NLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 506 ~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
+.||+|++.+++++.|+.|.++|+++
T Consensus 328 g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 328 GGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred CeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999763
No 247
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.64 E-value=7e-15 Score=149.24 Aligned_cols=237 Identities=22% Similarity=0.333 Sum_probs=150.5
Q ss_pred CCCcEEE---eCChHHHHHHHHHHhccCCCEEEEc-CCCccchHHHHH------hhcccCCcEEEEeCCC-----CHHHH
Q 009604 214 GAESTVI---MASGMSASTVMLLALVPAGGHIVTT-TDCYRKTRIFIE------TVLPKMGITATVIDPA-----DMEGL 278 (531)
Q Consensus 214 g~e~~i~---~sSG~~Ai~~al~all~pGD~VIv~-~~~y~~t~~~~~------~~l~~~Gi~v~~vd~~-----d~e~L 278 (531)
|+|++++ +.|||.||.++|.++++|||+++.. ..-|......+- ..|+.+|+.+..++.. |.+.+
T Consensus 68 gaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i 147 (403)
T PF06838_consen 68 GAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAI 147 (403)
T ss_dssp T-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHH
T ss_pred CchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHH
Confidence 7888887 7799999999999999999999864 445655444431 1256789999988743 79999
Q ss_pred HHhccCCCcEEEEEeCCC----CCCCcccCHHHHHHHHHhc--CCEEEEeCCCCCCcc-ccccccCCcEEEECCcccccc
Q 009604 279 EAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGG 351 (531)
Q Consensus 279 e~al~~~~tklV~lesP~----NPtG~v~dl~~I~~la~~~--gi~lIvD~a~a~~~~-~~~l~~gaDivv~S~sK~lgg 351 (531)
++++++ +||+|++.--. -|...+.+++++++++|+. +++++|||+|+.+.. ..|.+.|+|++..|+-|..||
T Consensus 148 ~~~~~~-~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~vGADl~aGSLIKNpGG 226 (403)
T PF06838_consen 148 KKALKP-NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPTEVGADLMAGSLIKNPGG 226 (403)
T ss_dssp HHHHHT-TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGGGT-SEEEEETTSGGGT
T ss_pred HHhhcc-CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCccccchhheeccceeCCCC
Confidence 999997 49999996543 3444555677777777764 799999999998865 678899999999999999998
Q ss_pred CCCceEEEEEeChHHHHHHHHHh------hhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeC
Q 009604 352 HNDVLAGSISGSGKLVTQIRNLH------HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 425 (531)
Q Consensus 352 ~g~v~gG~iv~~~~li~~l~~~~------~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~ 425 (531)
.-...||+|+++++++++..... ...|.++.. .-.+.+||---+.-+.+..+.+...+..+++.. .+ | .
T Consensus 227 giAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~--~R~~~QGlFlAP~vV~eAlKgaif~A~~fe~lG-~~-v-~ 301 (403)
T PF06838_consen 227 GIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGT--NRLMFQGLFLAPHVVGEALKGAIFAAALFEKLG-FE-V-S 301 (403)
T ss_dssp TT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--E-E-E
T ss_pred CccCcCCEEechHHHHHHHHhhhcCCccccccccCcch--HHHHHhHHhhchHHHHHHHHHHHHHHHHHHHcC-Cc-C-C
Confidence 87777999999999999875432 234444432 223345665555555566667777777777652 11 1 1
Q ss_pred CCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC
Q 009604 426 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI 468 (531)
Q Consensus 426 pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~ 468 (531)
|.. +.+-. --+-++++ ++.+...+|++.++.
T Consensus 302 P~~-~~~R~----------DiIQai~l-~~~e~l~~FC~~iQ~ 332 (403)
T PF06838_consen 302 PKP-DDPRS----------DIIQAIEL-GSPEKLIAFCQGIQA 332 (403)
T ss_dssp S-T-TS--S----------SS-EEEE--SSHHHHHHHHHHHHH
T ss_pred CCC-CCCCC----------ceEEEEEC-CCHHHHHHHHHHHHh
Confidence 221 11211 23677888 467889999998864
No 248
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.64 E-value=6.9e-14 Score=151.70 Aligned_cols=193 Identities=17% Similarity=0.093 Sum_probs=126.2
Q ss_pred eCChHHHHHHHHHHhccCCCEEEEcCCCccchH--HHHHhh--cccCCcEEE--EeCC------CCHHHHHHhccCCCcE
Q 009604 221 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTR--IFIETV--LPKMGITAT--VIDP------ADMEGLEAALNNNNVS 288 (531)
Q Consensus 221 ~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~--~~~~~~--l~~~Gi~v~--~vd~------~d~e~Le~al~~~~tk 288 (531)
..||+.|+..++.++++|||+|+..+...++.. ...... +...+..+. .+.. .|+++|++++++.+++
T Consensus 106 ~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pk 185 (475)
T PLN03226 106 PLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPK 185 (475)
T ss_pred cCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCe
Confidence 389999999999999999999998654333321 111111 111222211 1222 2899999988754578
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-----ccccccCCcEEEECCccccccCCCceEEEEEeC
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGS 363 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~ 363 (531)
+|++ ..++ ++...|+++|.++|+++|++|++|+++..++. ..++. ++|+++.|+||++.|+. ||+++++
T Consensus 186 lIv~-~~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~ 259 (475)
T PLN03226 186 LIIA-GASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE-YCDVVTTTTHKSLRGPR---GGMIFFR 259 (475)
T ss_pred EEEE-ecCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC-CCeEEEecCcccccCCC---ceEEEEc
Confidence 7766 2333 78889999999999999999999999876543 12333 69999999999996654 6888877
Q ss_pred hHHH-----------HH---HHHH-hhhcCCCchHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCCc
Q 009604 364 GKLV-----------TQ---IRNL-HHVLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 364 ~~li-----------~~---l~~~-~~~~G~~~s~~~a~l~l~~L~tl-----~~r~~~~~~na~~La~~L~~~p~v 420 (531)
++.+ +. +... ...+.+.+++...+.+..+++.+ ..+.++..+|++.|++.|.+. ++
T Consensus 260 ~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~ 335 (475)
T PLN03226 260 KGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GY 335 (475)
T ss_pred hhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 6543 21 1111 11223334444444444455543 335677789999999999873 44
No 249
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.63 E-value=1.5e-13 Score=146.25 Aligned_cols=270 Identities=19% Similarity=0.202 Sum_probs=169.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc---------cC-CCEEEEcCCCccch-HHHHHhhc-----ccCC---cEEEEeCCCC
Q 009604 214 GAESTVIMASGMSASTVMLLALV---------PA-GGHIVTTTDCYRKT-RIFIETVL-----PKMG---ITATVIDPAD 274 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all---------~p-GD~VIv~~~~y~~t-~~~~~~~l-----~~~G---i~v~~vd~~d 274 (531)
+.+.+++++||++|+..++..+. .+ .++|+.....|++. ...+...- ..++ ..+..++..|
T Consensus 93 ~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 172 (401)
T TIGR01885 93 GYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNN 172 (401)
T ss_pred CCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCC
Confidence 44679999999999999998642 13 35777777777753 33222100 0122 2244566778
Q ss_pred HHHHHHhccC--CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc-------ccccccCCcEE
Q 009604 275 MEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-------QKALSLGADLV 341 (531)
Q Consensus 275 ~e~Le~al~~--~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~-------~~~l~~gaDiv 341 (531)
+++|++++++ .++.+|++|.+.+++|.+.+ +++|.++|++||+++|+||++.. +. ........|++
T Consensus 173 ~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g-~g~~G~~~~~~~~~~~~di~ 251 (401)
T TIGR01885 173 LEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTG-LGRTGKLLCVDHENVKPDIV 251 (401)
T ss_pred HHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC-CCccchhhHHhhcCCCCCEE
Confidence 9999998852 24789999999999999887 99999999999999999999632 21 11123456877
Q ss_pred EECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCC
Q 009604 342 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPK 419 (531)
Q Consensus 342 v~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~p~ 419 (531)
+ ++|.+++.+. ..|++++++++++.++..........++..+..+...|+.+.. ..++..+....+.+.|++.+.
T Consensus 252 ~--~gK~l~~g~~-~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~~ 328 (401)
T TIGR01885 252 L--LGKALSGGVY-PVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLPK 328 (401)
T ss_pred E--eeccccCCCC-CcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhccC
Confidence 6 4599986433 3577778888887765422211112245555555556665542 223444555666666665421
Q ss_pred ceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCH--HHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHH
Q 009604 420 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 497 (531)
Q Consensus 420 v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~--~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~ 497 (531)
+-. ...+|.|.++.+.++.+. ....+|.+.|...++.+..+
T Consensus 329 ------~~~----------~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~--------------------- 371 (401)
T TIGR01885 329 ------PII----------TEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPT--------------------- 371 (401)
T ss_pred ------Cce----------eEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEec---------------------
Confidence 000 011246788888885431 25677788776544433211
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 498 RLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 498 ~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.++.|||+..+..+++.++.+.++|++
T Consensus 372 ------~~~~lRi~p~l~~t~~~i~~~l~~l~~ 398 (401)
T TIGR01885 372 ------HGNIIRLAPPLVITEEQLDEGLEIIKK 398 (401)
T ss_pred ------CCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 146899998776666666666666653
No 250
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.63 E-value=1.3e-13 Score=140.94 Aligned_cols=265 Identities=19% Similarity=0.209 Sum_probs=167.5
Q ss_pred CCCCCCCCCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHH
Q 009604 207 YGNPTTVGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLE 279 (531)
Q Consensus 207 ~gnPt~~g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le 279 (531)
.||+....++..+++++++.|+.++...|..|||..+++.|-|++.-.- +-=+-|+++..+.. .+.++||
T Consensus 138 r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrd---l~~rTgveivpv~c~Ss~~f~itv~alE 214 (471)
T KOG0256|consen 138 RGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVEIVPVHCSSSNGFQITVEALE 214 (471)
T ss_pred hCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCccccc---ceeccCceEEEEEeecCCCccccHHHHH
Confidence 3777766788888999999999999999999999999999999985321 11244788776642 2577787
Q ss_pred HhccC-----CCcEEEEEeCCCCCCCcccCHHH---HHHHHHhcCCEEEEeCCCCCCcccc-----cc--------ccCC
Q 009604 280 AALNN-----NNVSLFFTESPTNPFLRCVDVKL---VSDLCHKKGAIVCIDGTFATPLNQK-----AL--------SLGA 338 (531)
Q Consensus 280 ~al~~-----~~tklV~lesP~NPtG~v~dl~~---I~~la~~~gi~lIvD~a~a~~~~~~-----~l--------~~ga 338 (531)
+++.+ .++|.|++.||+||.|.+.+-++ +..++.++++.||+||+|+..+... .+ ....
T Consensus 215 ~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~r 294 (471)
T KOG0256|consen 215 AALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDR 294 (471)
T ss_pred HHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCc
Confidence 77642 26899999999999999998655 5556789999999999987533211 11 1112
Q ss_pred cEEEECCccccccCCCceEEEEEeChH-HHHHHHHHhhhcCCCchHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
Q 009604 339 DLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKT-------LHLRVQQQNSTALRM 410 (531)
Q Consensus 339 Divv~S~sK~lgg~g~v~gG~iv~~~~-li~~l~~~~~~~G~~~s~~~a~l~l~~L~t-------l~~r~~~~~~na~~L 410 (531)
.-++.|+||=+|-+|-+ .|+|+...+ +....+++. .+|. .+++..+++..-|.+ +.+.-++.....+++
T Consensus 295 vHivyslSKD~GlpGfR-vGviYS~ne~VvsaA~kms-sf~~-vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~ 371 (471)
T KOG0256|consen 295 VHIVYSLSKDFGLPGFR-VGVIYSNNEDVVSAATKMS-SFGL-VSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYI 371 (471)
T ss_pred EEEEEEeccccCCCceE-EEEEEecChHHHHHHHHHh-hccC-CcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 25789999999988754 788887554 444444433 3443 344444444333322 122222333334455
Q ss_pred HHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC-----C-HHHH---HHHHHHcCCCCcccccCCcccc
Q 009604 411 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-----D-LTAT---IKFIDALKIPYIAPSFGGCESI 481 (531)
Q Consensus 411 a~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g-----~-~~~~---~~fl~~L~~~~iavS~Gg~~Sl 481 (531)
.+.|++. ..|-+++ +.|-++++++.. + +.+. +++++++ ++-+|.|..+
T Consensus 372 ~~gLk~l------gI~cl~s------------~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~v---klnlSpG~s~-- 428 (471)
T KOG0256|consen 372 VEGLKAL------GIPCLKS------------NAGLFCWVDLRKLLTSLTFEGELELWERILDNV---KLNLSPGSSC-- 428 (471)
T ss_pred HhhHHhc------CCceeec------------CCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhh---ccccCCCCcc--
Confidence 5666543 2333332 245677777642 1 1122 3344444 4567777543
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009604 482 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 519 (531)
Q Consensus 482 i~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~ed 519 (531)
|.. .+|++|+.+.-...+.
T Consensus 429 --------~C~-----------EpGWFRvcFAn~~~~t 447 (471)
T KOG0256|consen 429 --------HCH-----------EPGWFRVCFANMSEET 447 (471)
T ss_pred --------eec-----------CCCeEEEEeccCCHHH
Confidence 111 2699999998654433
No 251
>PRK02769 histidine decarboxylase; Provisional
Probab=99.63 E-value=6.7e-14 Score=147.84 Aligned_cols=204 Identities=19% Similarity=0.187 Sum_probs=139.6
Q ss_pred EEEeCChHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC--CCCHHHHHHhccCC--CcEEEE
Q 009604 218 TVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--PADMEGLEAALNNN--NVSLFF 291 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~al--l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd--~~d~e~Le~al~~~--~tklV~ 291 (531)
.+++++|++++..++... ..++++|+++..+|.+....++ .+...+..+...+ ..|+++|+++|+++ +|.+|.
T Consensus 87 G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~-~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv 165 (380)
T PRK02769 87 GYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIAR-LLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIF 165 (380)
T ss_pred EEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHH-HcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEE
Confidence 467778889988776543 3578999999999999775552 3333233333222 24899999999763 389999
Q ss_pred EeCCCCCCCcccCHHHHHHHHHhcC---CEEEEeCCCCCCcc--------ccccccCCcEEEECCccccccCCCceEEEE
Q 009604 292 TESPTNPFLRCVDVKLVSDLCHKKG---AIVCIDGTFATPLN--------QKALSLGADLVLHSATKFIGGHNDVLAGSI 360 (531)
Q Consensus 292 lesP~NPtG~v~dl~~I~~la~~~g---i~lIvD~a~a~~~~--------~~~l~~gaDivv~S~sK~lgg~g~v~gG~i 360 (531)
+..++|++|.+.|+++|.++|+++| +++++|.+++.+.. .+... ++|.++.|.||+++++.+ .|++
T Consensus 166 ~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g--~G~l 242 (380)
T PRK02769 166 ANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMP--CGIV 242 (380)
T ss_pred EEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCC--cEEE
Confidence 9999999999999999999999998 69999999876433 22223 899999999999984433 5777
Q ss_pred EeChHHHHHHHHHh--------hhcCCC--chHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 361 SGSGKLVTQIRNLH--------HVLGGA--LNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 361 v~~~~li~~l~~~~--------~~~G~~--~s~~~a~l~l~~L--~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
+.+++..+.+.... ...|+. ......|..++.+ +.+..+.++..+.++++.+.|++. ++..+..|
T Consensus 243 ~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p 319 (380)
T PRK02769 243 LAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNP 319 (380)
T ss_pred EEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCC
Confidence 77776665542110 112222 1234445444332 345566677778888888888764 45444444
No 252
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.62 E-value=2.7e-14 Score=145.01 Aligned_cols=268 Identities=18% Similarity=0.223 Sum_probs=184.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCC---CcE
Q 009604 214 GAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNN---NVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~---~tk 288 (531)
+.+.+++|+|..-|+...|..|. -||.+|..+.-.|.+....+ +..+++-..+..+|++.|+++|+.. .+|
T Consensus 230 qK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GI----rns~v~K~IFrHND~~hL~~lL~~~~~svPK 305 (570)
T KOG1360|consen 230 QKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGI----RNSRVPKHIFRHNDLDHLEQLLQSSPKSVPK 305 (570)
T ss_pred cCcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHh----hhcCCcceeeccCCHHHHHHHHHhCCCCCCc
Confidence 78899999999988888887774 48999988877777755433 4445655556778999999888642 379
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc---------cccccCCcEEEECCccccccCCCceEEE
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~---------~~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+|-+|+.+++.|.++||++|++++|+||++.++||+++.++.. +-+-...||+..++-|.||. +||+
T Consensus 306 ivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc----VGGY 381 (570)
T KOG1360|consen 306 IVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC----VGGY 381 (570)
T ss_pred eEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc----ccce
Confidence 9999999999999999999999999999999999997765431 11223478999999999984 4799
Q ss_pred EEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCc
Q 009604 360 ISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLH-----LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHP 432 (531)
Q Consensus 360 iv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~L~tl~-----~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p 432 (531)
|.+...+++.+|.+.. ++...+.|....-++.+.+.+. ...+++++|.+++.+.|.+. ..|-++ .|
T Consensus 382 IAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~------GiPVi~-~p 454 (570)
T KOG1360|consen 382 IAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL------GIPVIP-NP 454 (570)
T ss_pred ehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc------CCcccC-CC
Confidence 9999999999987654 4556666654433333333331 12245668888888888764 223222 12
Q ss_pred hhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE
Q 009604 433 EHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS 511 (531)
Q Consensus 433 ~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L-~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlS 511 (531)
..++-+.+ |+...+....+.| ...+|.+ ..|..|... .....+||.
T Consensus 455 ------------SHIiPv~v-gda~l~~~~sd~Li~~h~iYv------QaINyPTV~--------------rG~E~LRia 501 (570)
T KOG1360|consen 455 ------------SHIIPVRV-GDAALAKQASDILISKHNIYV------QAINYPTVA--------------RGTERLRIA 501 (570)
T ss_pred ------------cceeeeec-cCHHHHHHHHHHHHHhcCeEE------EeccCCccc--------------ccceeeecC
Confidence 23777877 4433333333333 1112111 123334321 134679999
Q ss_pred ecCCCHHHHHHHHHHHHH
Q 009604 512 FGVEDFEDLKADVLQALH 529 (531)
Q Consensus 512 vGlE~~edli~dL~~AL~ 529 (531)
--..++.++.++|.++|.
T Consensus 502 PTP~HT~~mm~~lv~~l~ 519 (570)
T KOG1360|consen 502 PTPHHTPQMMNILVNALL 519 (570)
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 888888888887777764
No 253
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.62 E-value=5.8e-14 Score=146.88 Aligned_cols=260 Identities=11% Similarity=0.032 Sum_probs=170.6
Q ss_pred CcEEEe-CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC---------CCCHHHHHHhccCC
Q 009604 216 ESTVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID---------PADMEGLEAALNNN 285 (531)
Q Consensus 216 e~~i~~-sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd---------~~d~e~Le~al~~~ 285 (531)
.+++++ +||+.|+.+++..++++||++++....+.+.+ +.+.++++|+ +..+. ..++++++ +++
T Consensus 56 ~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r--~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~- 129 (349)
T TIGR01364 56 YEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKK--AAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISE- 129 (349)
T ss_pred ceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCC-
Confidence 346666 45999999999999999999887766665543 2356777787 44433 22445444 344
Q ss_pred CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeCh
Q 009604 286 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 364 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~ 364 (531)
++++|.+.+-.+.||...+ ++++.++++++||.+.+.+. ..+..+ .|++++|.+|.+|++| .|+++.++
T Consensus 130 ~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~~~--~d~~~~ssqK~lgP~G---lg~l~~s~ 199 (349)
T TIGR01364 130 DAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDVSK--FGLIYAGAQKNIGPAG---LTVVIVRK 199 (349)
T ss_pred CCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCCHHH--ccEEEEecccccCCCc---eEEEEECH
Confidence 4899999888899999876 67777899999999976543 344444 3599999999999887 78889998
Q ss_pred HHHHHHHHH-------h--h---hcCCCchHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 365 KLVTQIRNL-------H--H---VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 365 ~li~~l~~~-------~--~---~~G~~~s~~~a~l~l~~L~t------l~~r~~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
++++++... . . ..-.+.+....+.+..+|+. ++.+.+++.+.++.+.++|++.+++. .+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~---~~ 276 (349)
T TIGR01364 200 DLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFY---RN 276 (349)
T ss_pred HHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCee---cc
Confidence 887665321 1 0 01123333334444444443 44455666777888888888876531 11
Q ss_pred CCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCC
Q 009604 427 GLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDN 506 (531)
Q Consensus 427 gl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~ 506 (531)
.. .+.. ..+.+++|.+++. ....++++.+...++.+..|.. ..+
T Consensus 277 ~~--~~~~--------rs~~v~sf~~~~~-~~~~~~~~~~~~~Gi~~~~~~~-------------------------~~g 320 (349)
T TIGR01364 277 PV--DPRN--------RSRMNVVFTLGNE-ELEKRFLKEAEERGLVSLKGHR-------------------------SVG 320 (349)
T ss_pred CC--CHHH--------cCCeEEEEecCCh-hHhHHHHHHHHHCCCcccCCcc-------------------------ccC
Confidence 11 1111 1346799998753 1235565655444542222200 136
Q ss_pred eEEEEecCCCHHHHHHHHHHHHHh
Q 009604 507 LVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 507 lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.+|+|++.+++++.|+.|.++|++
T Consensus 321 ~vRvS~~~~nt~edid~l~~al~~ 344 (349)
T TIGR01364 321 GMRASIYNAMPLEGVQALVDFMKE 344 (349)
T ss_pred eeEEECcCCCCHHHHHHHHHHHHH
Confidence 899999999999999999999875
No 254
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.62 E-value=2.7e-13 Score=144.24 Aligned_cols=268 Identities=15% Similarity=0.152 Sum_probs=160.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--------cCCCEEEEcCCCccchHHHHHhhc---------ccCCcEEEEeCCCCHH
Q 009604 214 GAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVL---------PKMGITATVIDPADME 276 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all--------~pGD~VIv~~~~y~~t~~~~~~~l---------~~~Gi~v~~vd~~d~e 276 (531)
+.+.+++++||++|+..+++... ...++||..+..|++........- ......+..++..|++
T Consensus 91 ~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 170 (397)
T TIGR03246 91 FADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLA 170 (397)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHH
Confidence 45689999999999999998541 123567776666666432211110 0111234566778999
Q ss_pred HHHHhccCCCcEEEEEeCCCCCCCccc-C---HHHHHHHHHhcCCEEEEeCCCCCCcc-------ccccccCCcEEEECC
Q 009604 277 GLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATPLN-------QKALSLGADLVLHSA 345 (531)
Q Consensus 277 ~Le~al~~~~tklV~lesP~NPtG~v~-d---l~~I~~la~~~gi~lIvD~a~a~~~~-------~~~l~~gaDivv~S~ 345 (531)
++++++++ ++++|++|.++++.|.+. | +++|.++|++||+++|+||++. ++. ........|++ ++
T Consensus 171 ~l~~~l~~-~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~Gr~G~~~a~~~~gv~pDi~--t~ 246 (397)
T TIGR03246 171 AAKALISD-KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDIL--TS 246 (397)
T ss_pred HHHHHhcc-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-cCCccccchhhhhcCCCCCEE--Ee
Confidence 99999976 499999998777777553 3 8899999999999999999972 221 11122235665 68
Q ss_pred ccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcCCCceEE
Q 009604 346 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRV 423 (531)
Q Consensus 346 sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~~~p~v~~V 423 (531)
+|.+++ | ...|++++++++++.+...........+|..+..++..++.+. ...++..++.+++.+.|++...
T Consensus 247 ~K~lgg-G-~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~---- 320 (397)
T TIGR03246 247 AKALGG-G-FPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINA---- 320 (397)
T ss_pred ehhhhC-C-cceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----
Confidence 999974 3 4578888888887776532211111234555544444554432 2344455566666666654321
Q ss_pred eCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcC
Q 009604 424 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 502 (531)
Q Consensus 424 ~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~g 502 (531)
.++.. ...+|.|.++.+++... ......|.+.|...++-+..
T Consensus 321 ~~~~~----------~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~--------------------------- 363 (397)
T TIGR03246 321 RYNVF----------SEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALI--------------------------- 363 (397)
T ss_pred cCCCe----------EeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEee---------------------------
Confidence 11100 11235678888888532 23456777776544422211
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHH
Q 009604 503 IMDNLVRFSFGVEDFEDLKADVLQAL 528 (531)
Q Consensus 503 i~~~lIRlSvGlE~~edli~dL~~AL 528 (531)
..++.||++..+-.+++.++.+.++|
T Consensus 364 ~g~~~lR~~p~~~~t~~~i~~~~~~l 389 (397)
T TIGR03246 364 AGPNVVRFAPSLVISDDDIDEGLARF 389 (397)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHHH
Confidence 01368999877655555555444444
No 255
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.61 E-value=7.2e-14 Score=149.52 Aligned_cols=195 Identities=14% Similarity=0.153 Sum_probs=140.8
Q ss_pred cEEEeCChH-HHHHHHHHHhcc---CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhccC
Q 009604 217 STVIMASGM-SASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNN 284 (531)
Q Consensus 217 ~~i~~sSG~-~Ai~~al~all~---pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--------~d~e~Le~al~~ 284 (531)
.++++++|+ .++.+++.++-. +||+||++...|.++.. .+...|++++++|. .|+++|+++|++
T Consensus 125 ~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~k----Ai~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~ 200 (444)
T TIGR03531 125 SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIK----AISTAGFEPRVIETVLDGDELTTDVEDIERAIEE 200 (444)
T ss_pred EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHH----HHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHh
Confidence 699999999 688888877642 68999999998887764 34455788777773 279999999975
Q ss_pred C--CcEEEEEeCCC-CCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc------cccccC-CcEEEECCccccccCCC
Q 009604 285 N--NVSLFFTESPT-NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSLG-ADLVLHSATKFIGGHND 354 (531)
Q Consensus 285 ~--~tklV~lesP~-NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~------~~l~~g-aDivv~S~sK~lgg~g~ 354 (531)
. ++.++++.+|+ .+.|.+.|+++|.++|++||+++|+|++|+..... .....| +|++++|+||++..+++
T Consensus 201 ~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~ 280 (444)
T TIGR03531 201 IGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKVGRVDAVVSSTDKNFMVPVG 280 (444)
T ss_pred ccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccccccCCCeEEEeCccCCCCCCC
Confidence 2 35666666665 45568889999999999999999999999864321 223344 69999999999987654
Q ss_pred ceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 009604 355 VLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLI--IRGMKTLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 355 v~gG~iv~-~~~li~~l~~~~~~~G~~~s~~~a~l~--l~~L~tl~~r~~~~~~na~~La~~L~~~ 417 (531)
||+++. ++++.+.++..............+|+. ..+.+.+...+++..++++.+.+.|++.
T Consensus 281 --Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l 344 (444)
T TIGR03531 281 --GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKL 344 (444)
T ss_pred --EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766 667777776543211111123334433 3355777788888888898888888764
No 256
>PLN02271 serine hydroxymethyltransferase
Probab=99.60 E-value=2.4e-13 Score=146.84 Aligned_cols=192 Identities=19% Similarity=0.148 Sum_probs=133.4
Q ss_pred EEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHH-----hhcccCCcEEEEeC--C------CCHHHHHHhccCC
Q 009604 219 VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-----TVLPKMGITATVID--P------ADMEGLEAALNNN 285 (531)
Q Consensus 219 i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~-----~~l~~~Gi~v~~vd--~------~d~e~Le~al~~~ 285 (531)
+-.-||+.|+.+++.++++|||+|+..+..|++...... ......|+.+..++ . .|.++|++.+...
T Consensus 218 VQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~ 297 (586)
T PLN02271 218 VQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDF 297 (586)
T ss_pred eeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhc
Confidence 445599999999999999999999999999988543211 11233454443332 2 3889999844444
Q ss_pred CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-----ccccccCCcEEEECCccccccCCCceEEEE
Q 009604 286 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSI 360 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~i 360 (531)
++|+|++....+| ...|+++|.++|+++|++|++|.++..++. .+|+. ++|+++.|+||++.|+. ||++
T Consensus 298 rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~-~aDvvt~TTHKtLrGPr---GG~I 371 (586)
T PLN02271 298 RPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD-YCDIVTSTTHKSLRGPR---GGII 371 (586)
T ss_pred CCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc-CCcEEEeCCcccCCCCC---ceEE
Confidence 6999999877777 779999999999999999999999876543 34555 59999999999998885 6777
Q ss_pred EeChH--------------------HHHHHHHHh--hhcCCCchHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH
Q 009604 361 SGSGK--------------------LVTQIRNLH--HVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKI 413 (531)
Q Consensus 361 v~~~~--------------------li~~l~~~~--~~~G~~~s~~~a~l~l~~L~-----tl~~r~~~~~~na~~La~~ 413 (531)
+.+++ +.+++.... ...|+......+.++ .+++ .+....++..+|++.|++.
T Consensus 372 ~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalA-valkea~~~efk~Ya~QVv~NAkaLA~~ 450 (586)
T PLN02271 372 FYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALA-IALKQVATPEYKAYMQQVKKNAQALASA 450 (586)
T ss_pred EecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHH-HHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 76643 333333211 122332222222221 2232 3456678888999999999
Q ss_pred HHcC
Q 009604 414 LEAH 417 (531)
Q Consensus 414 L~~~ 417 (531)
|.++
T Consensus 451 L~~~ 454 (586)
T PLN02271 451 LLRR 454 (586)
T ss_pred HHHC
Confidence 9876
No 257
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.59 E-value=7.4e-14 Score=146.67 Aligned_cols=259 Identities=12% Similarity=0.014 Sum_probs=168.5
Q ss_pred cEEE-eCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC------CHHHHHH-hccCCCcE
Q 009604 217 STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA------DMEGLEA-ALNNNNVS 288 (531)
Q Consensus 217 ~~i~-~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~------d~e~Le~-al~~~~tk 288 (531)
++++ .+||+.|+.+++..++.+||++++......+-+ +.+.++++|.. ..+... +..++++ ++++ +++
T Consensus 68 ~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r--~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~-~~~ 143 (360)
T PRK05355 68 KVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKK--AIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSD-DAA 143 (360)
T ss_pred EEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCc-eEEecccccCCCCCCChhhccCCC-CCC
Confidence 3444 477889999999999999998877665555433 23566777765 333211 2334444 7776 489
Q ss_pred EEEEeCCCCCCCccc-CHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChHH
Q 009604 289 LFFTESPTNPFLRCV-DVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 366 (531)
Q Consensus 289 lV~lesP~NPtG~v~-dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l 366 (531)
+|++.+-.+.||... |+++| +|++++||.+++.+. ..+..++ |++++|.+|.+|++| .|+++.++++
T Consensus 144 ~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ssqK~lgP~G---lg~l~~s~~~ 212 (360)
T PRK05355 144 YVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQKNIGPAG---LTIVIVREDL 212 (360)
T ss_pred EEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEeccccccCCc---eEEEEECHHH
Confidence 999999889999998 77766 899999999976553 3343343 699999999999887 7899999888
Q ss_pred HHHHHHH-h---------h--hcCCCchHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCC
Q 009604 367 VTQIRNL-H---------H--VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 428 (531)
Q Consensus 367 i~~l~~~-~---------~--~~G~~~s~~~a~l~l~~L~t------l~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl 428 (531)
++++... . . ..-.+.+....+.+..+|+. ++.+.+++.+.++.+.++|++.+... + +
T Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~----~-~ 287 (360)
T PRK05355 213 LGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYR----N-P 287 (360)
T ss_pred HhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcc----c-C
Confidence 7665431 0 0 11123344444444444443 34555667777888888888775211 1 0
Q ss_pred CCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009604 429 KSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 508 (531)
Q Consensus 429 ~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lI 508 (531)
. .+.+ ..+.+++|.+++. ....++++.+...++.+..| |. ..+.+
T Consensus 288 ~-~~~~--------rs~~v~sf~~~~~-~~~~~~~~~~~~~Gi~~~~~-------------~~------------~~g~v 332 (360)
T PRK05355 288 V-APED--------RSRMNVPFTLADE-ELDKKFLAEAKAAGLVGLKG-------------HR------------SVGGM 332 (360)
T ss_pred C-Chhh--------cCCcEEEEEcCCh-HHHHHHHHHHHHCCCcccCC-------------CC------------ccCcE
Confidence 0 1111 1356899999764 23355656554433222111 00 14689
Q ss_pred EEEecCCCHHHHHHHHHHHHHh
Q 009604 509 RFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 509 RlSvGlE~~edli~dL~~AL~~ 530 (531)
|+|++.+++.+.|+.|.++|++
T Consensus 333 RiS~~~~nt~eei~~l~~~l~~ 354 (360)
T PRK05355 333 RASIYNAMPLEGVQALVDFMKE 354 (360)
T ss_pred EEECCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999875
No 258
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.59 E-value=6e-13 Score=141.98 Aligned_cols=268 Identities=13% Similarity=0.143 Sum_probs=161.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--------cCCCEEEEcCCCccchHHHHHhhccc------C---CcEEEEeCCCCHH
Q 009604 214 GAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVLPK------M---GITATVIDPADME 276 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all--------~pGD~VIv~~~~y~~t~~~~~~~l~~------~---Gi~v~~vd~~d~e 276 (531)
+.+.+++++||++|+..+++... ...++|+..+..|++........-.. + --.+..++..|++
T Consensus 95 ~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 174 (406)
T PRK12381 95 FADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLN 174 (406)
T ss_pred CCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHH
Confidence 34689999999999999987642 13467888888887754222111100 0 0123445667899
Q ss_pred HHHHhccCCCcEEEEEeCCCCCCCccc-----CHHHHHHHHHhcCCEEEEeCCCCCC-ccc-----cccccCCcEEEECC
Q 009604 277 GLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATP-LNQ-----KALSLGADLVLHSA 345 (531)
Q Consensus 277 ~Le~al~~~~tklV~lesP~NPtG~v~-----dl~~I~~la~~~gi~lIvD~a~a~~-~~~-----~~l~~gaDivv~S~ 345 (531)
++++.+++ ++++|++| |.|++|-+. .+++|.++|++||+++|+||++... ... .......|+ .++
T Consensus 175 ~l~~~l~~-~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi--~t~ 250 (406)
T PRK12381 175 SASALIDD-QTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDV--LTT 250 (406)
T ss_pred HHHHhccC-CeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCE--EEe
Confidence 99999976 48999997 778877543 3789999999999999999997321 111 111223565 478
Q ss_pred ccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcCCCceEE
Q 009604 346 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRV 423 (531)
Q Consensus 346 sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~~~p~v~~V 423 (531)
+|.+++ | ...|++++++++++.+...........++..+..+...++.+. ...++..++.+.+.+.|++...
T Consensus 251 sK~l~g-G-~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~---- 324 (406)
T PRK12381 251 AKALGG-G-FPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINA---- 324 (406)
T ss_pred hhhhhC-C-CceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----
Confidence 999984 3 4578888888888877543222212335665555555555443 2344445556666666654310
Q ss_pred eCCCCCCCchhhhhhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcC
Q 009604 424 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 502 (531)
Q Consensus 424 ~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~-~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~g 502 (531)
.++.. .+.++.|.++.+++.... .....+.+.+...++.+...
T Consensus 325 ~~~~~----------~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-------------------------- 368 (406)
T PRK12381 325 RYGLF----------SEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA-------------------------- 368 (406)
T ss_pred hCCCE----------EEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC--------------------------
Confidence 01100 111356788899986421 24566777775544333210
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHH
Q 009604 503 IMDNLVRFSFGVEDFEDLKADVLQAL 528 (531)
Q Consensus 503 i~~~lIRlSvGlE~~edli~dL~~AL 528 (531)
.++.|||++.+..+++.++.+.++|
T Consensus 369 -g~~~lRl~p~~~~t~~~i~~~~~~l 393 (406)
T PRK12381 369 -GPNVVRFAPALNISEEEITTGLDRF 393 (406)
T ss_pred -CCCEEEEeCCccCCHHHHHHHHHHH
Confidence 1357999988754444444444433
No 259
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.59 E-value=1.5e-14 Score=152.71 Aligned_cols=160 Identities=24% Similarity=0.425 Sum_probs=118.1
Q ss_pred CCCcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----------CH-----HH
Q 009604 214 GAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----------DM-----EG 277 (531)
Q Consensus 214 g~e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----------d~-----e~ 277 (531)
|++++++..+|+ .+|..++++++++||.|++++++|.+++..+ ...|+.++++++. ++ +.
T Consensus 80 GAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~al----il~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~ 155 (417)
T PF01276_consen 80 GADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNAL----ILSGAIPVYIPPEDNEYGIIGGISPDEFNEED 155 (417)
T ss_dssp TESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHH----HHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHH
T ss_pred CCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHH----HHcCCeEEEecCCccccCCccCCChhhhhHHH
Confidence 899999999998 8999999999999999999999999987544 3347777766531 34 88
Q ss_pred HHHhccCC-Cc---EEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc-----cccccCCc-------EE
Q 009604 278 LEAALNNN-NV---SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSLGAD-------LV 341 (531)
Q Consensus 278 Le~al~~~-~t---klV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l~~gaD-------iv 341 (531)
|+++|+++ .. ++|++.+|+ ..|.+.|+++|+++||++|++|+|||+|+..+.+ ....+|+| ++
T Consensus 156 i~~~l~~~p~~k~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~~gad~~~~~~~~v 234 (417)
T PF01276_consen 156 IEEALKEHPDAKAPRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALALGADRPNDPGIIV 234 (417)
T ss_dssp HHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSSTTSS-CTSBEEEE
T ss_pred HHHHHHhCccccCceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhhccCccccccceee
Confidence 99888743 23 449998987 6899999999999999999999999998765433 34567999 99
Q ss_pred EECCccccccCCCceEEEEEeChH---HHHHHHHHhhhcCCC
Q 009604 342 LHSATKFIGGHNDVLAGSISGSGK---LVTQIRNLHHVLGGA 380 (531)
Q Consensus 342 v~S~sK~lgg~g~v~gG~iv~~~~---li~~l~~~~~~~G~~ 380 (531)
++|+||.+++.. .+.++-.+.+ ..++++.....+.++
T Consensus 235 vqS~HKtL~alt--Qts~lh~~~~~~v~~~~~~~~l~~~~TT 274 (417)
T PF01276_consen 235 VQSTHKTLPALT--QTSMLHVKGDRIVDHERVNEALSMHQTT 274 (417)
T ss_dssp EEEHHHHSSS-T--T-EEEEEETCCCTTHHHHHHHHHHHS-S
T ss_pred eechhhcccccc--cceEEEecCCCcccHHHHHHHHHHHcCC
Confidence 999999999775 3566655443 246676665555543
No 260
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.58 E-value=2.8e-13 Score=156.24 Aligned_cols=276 Identities=17% Similarity=0.161 Sum_probs=178.6
Q ss_pred CCCcEEEeCChH----HHHHHHHHHhccC-CC----EEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHH
Q 009604 214 GAESTVIMASGM----SASTVMLLALVPA-GG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLE 279 (531)
Q Consensus 214 g~e~~i~~sSG~----~Ai~~al~all~p-GD----~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le 279 (531)
|.+++++..+.+ .|+.++++++.++ || +||++...|+.....+. ..|+++++++.+ |+++|+
T Consensus 582 g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~----~~G~~vv~v~~d~~G~vDle~L~ 657 (993)
T PLN02414 582 GFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA----MCGMKIVVVGTDAKGNINIEELR 657 (993)
T ss_pred CCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH----HCCCEEEEeccCCCCCcCHHHHH
Confidence 787788877777 7999999999877 88 89999999998775543 258888888653 899999
Q ss_pred HhccC--CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc--cccccccCCcEEEECCccccccC---
Q 009604 280 AALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVLHSATKFIGGH--- 352 (531)
Q Consensus 280 ~al~~--~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~--~~~~l~~gaDivv~S~sK~lgg~--- 352 (531)
+++++ .+|++|++.+|+|.+|...|+++|+++||++|+++++|.++..++ ...+.++|+|++++|.||+|+++
T Consensus 658 ~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~ 737 (993)
T PLN02414 658 KAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGG 737 (993)
T ss_pred HHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCccc
Confidence 99985 248999999999999999999999999999999999999986543 35667899999999999976632
Q ss_pred CCceEEEEEeChHHHHHHHHH------------h-hhcCCCc-hHH---------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 009604 353 NDVLAGSISGSGKLVTQIRNL------------H-HVLGGAL-NPN---------AAYLIIRGMKTLHLRVQQQNSTALR 409 (531)
Q Consensus 353 g~v~gG~iv~~~~li~~l~~~------------~-~~~G~~~-s~~---------~a~l~l~~L~tl~~r~~~~~~na~~ 409 (531)
|+--.|+++.++++...+-.. . ...|..- .+. .+|+..-|.+.+.+--++...|+.+
T Consensus 738 GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnY 817 (993)
T PLN02414 738 GGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANY 817 (993)
T ss_pred CCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHH
Confidence 112257888887665443211 0 0012211 111 1222222333343333445577888
Q ss_pred HHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEE-EcCC-HHHHHHHHHHcCCCCcccccCCcccccccCcc
Q 009604 410 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE-VDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAI 487 (531)
Q Consensus 410 La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~-l~g~-~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~ 487 (531)
+++.|++...+ .|++-...--|+ .++.+. ++.. ...+..+.++|...++-. .+
T Consensus 818 l~~rL~~~~~~---~~~~~~~~~~hE----------fv~~~~~l~~~~g~~~~di~krL~d~Giha------------pt 872 (993)
T PLN02414 818 MAKRLEGHYPV---LFRGKNGTCAHE----------FIIDLRPFKNTAGIEPEDVAKRLMDYGFHA------------PT 872 (993)
T ss_pred HHHHHHhhCCc---cccCCCCCeeee----------EEEeccccccccCCCHHHHHHHHHHcCcEE------------ee
Confidence 88888765432 333211000111 122222 2210 022344555554433211 11
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 488 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 488 ~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
++ + + .++.+|++.-..+..+.+|.|.++|.+
T Consensus 873 ~~-~--p---------v~~~lmiepTE~~skeelDrf~~al~~ 903 (993)
T PLN02414 873 MS-W--P---------VPGTLMIEPTESESKAELDRFCDALIS 903 (993)
T ss_pred ec-c--c---------cCCEEEEEeeeeCCHHHHHHHHHHHHH
Confidence 11 0 1 157899999998888888998888864
No 261
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.58 E-value=2.4e-15 Score=153.00 Aligned_cols=202 Identities=22% Similarity=0.276 Sum_probs=140.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccC----
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNN---- 284 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~---- 284 (531)
|.+.++++.+|+.|+.++++++++|++.||+..+.|...+..- ......|+++..++. .++++|++++..
T Consensus 43 g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~g-a~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h 121 (290)
T PF01212_consen 43 GKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETG-AIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAH 121 (290)
T ss_dssp TSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTT-HHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccc-hhhHhcCcEEEECCCcccCCCCHHHHHHHhhhcccc
Confidence 8999999999999999999999999999999887664322100 001224777666643 378999998865
Q ss_pred -CCcEEEEEeCCCCCC-CcccC---HHHHHHHHHhcCCEEEEeCCCC------CCccccccccCCcEEEECCccccccCC
Q 009604 285 -NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFA------TPLNQKALSLGADLVLHSATKFIGGHN 353 (531)
Q Consensus 285 -~~tklV~lesP~NPt-G~v~d---l~~I~~la~~~gi~lIvD~a~a------~~~~~~~l~~gaDivv~S~sK~lgg~g 353 (531)
.++++|++|+|+|.. |.+++ +++|.++||++|++|++|.+-. .......+..++|++..|++|.++..+
T Consensus 122 ~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~ 201 (290)
T PF01212_consen 122 HPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPG 201 (290)
T ss_dssp SGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSS
T ss_pred CCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEccccccc
Confidence 248999999999864 77775 6678888999999999999931 111222334689999999999988775
Q ss_pred CceEEEEEeChHHHHHHHHHhhhcCCCch---HHHH---H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 009604 354 DVLAGSISGSGKLVTQIRNLHHVLGGALN---PNAA---Y--LIIRGMKTLHLRVQQQNSTALRMAKILEAHPK 419 (531)
Q Consensus 354 ~v~gG~iv~~~~li~~l~~~~~~~G~~~s---~~~a---~--l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~ 419 (531)
|++++++++++++.+.+++.+|+.+. ...+ | ..+..++....++.+..+++++|++.|+..+.
T Consensus 202 ---Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~~~ 272 (290)
T PF01212_consen 202 ---GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEALGG 272 (290)
T ss_dssp ---EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEECE
T ss_pred ---ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHCCC
Confidence 88999999988776666666664432 1122 1 22223333345667777889999999987654
No 262
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.57 E-value=8.3e-13 Score=139.27 Aligned_cols=261 Identities=15% Similarity=0.108 Sum_probs=160.5
Q ss_pred cEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccc-hHHHHHhh-----cccCCc---EEEEeCCCCHHHHHHhccCC
Q 009604 217 STVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRK-TRIFIETV-----LPKMGI---TATVIDPADMEGLEAALNNN 285 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~-t~~~~~~~-----l~~~Gi---~v~~vd~~d~e~Le~al~~~ 285 (531)
.+++++||++|+..+++... ..+++|++.+..|++ +...+... -..++. .+.+.+..|++++++.+++
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~- 164 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNK- 164 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCC-
Confidence 36788999999998887652 446788887777765 33222110 011111 1233345689999999876
Q ss_pred CcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc-ccc-----cccCCcEEEECCccccccCCCc
Q 009604 286 NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-QKA-----LSLGADLVLHSATKFIGGHNDV 355 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~-~~~-----l~~gaDivv~S~sK~lgg~g~v 355 (531)
++++|++|+++|++|.+.+ +++|.++|+++|+++|+||++..... ..+ .....|++ |++|.+++. .
T Consensus 165 ~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G--~ 240 (375)
T PRK04260 165 NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIF--TLAKGLANG--V 240 (375)
T ss_pred CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEE--EecccccCC--c
Confidence 4899999999999998865 89999999999999999999743211 111 12335654 799999853 3
Q ss_pred eEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH----cCCCceEEeCCCCC
Q 009604 356 LAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILE----AHPKVKRVHYPGLK 429 (531)
Q Consensus 356 ~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~----~~p~v~~V~~pgl~ 429 (531)
..|++++++++.+.+...........++..+..+...++.+. ..+++..+..+.+.+.|. +++.+..+
T Consensus 241 ~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------ 314 (375)
T PRK04260 241 PVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTV------ 314 (375)
T ss_pred ceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE------
Confidence 478888888887766532211112224555555555554432 223333344444444443 33222111
Q ss_pred CCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEE
Q 009604 430 SHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 509 (531)
Q Consensus 430 s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIR 509 (531)
.+.|.+++++++. ...+|.+.+...++.+. |. ..+.||
T Consensus 315 ------------~~~g~~~~~~~~~---~~~~~~~~l~~~Gi~v~----------~~-----------------~~~~lR 352 (375)
T PRK04260 315 ------------RGLGYMIGIETTA---DLSQLVEAARDKGLIVL----------TA-----------------GTNVIR 352 (375)
T ss_pred ------------eccceEEEEEecC---cHHHHHHHHHhCCCEEe----------cC-----------------CCCEEE
Confidence 2357789999843 34567777655443321 10 136799
Q ss_pred EEecCCCHHHHHHHHHHHHHh
Q 009604 510 FSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 510 lSvGlE~~edli~dL~~AL~~ 530 (531)
|+..+..+++.++.+.+.|++
T Consensus 353 ~~~~~~~t~~~i~~~l~~l~~ 373 (375)
T PRK04260 353 LLPPLTLTKEEIEQGIAILSE 373 (375)
T ss_pred EcCCCccCHHHHHHHHHHHHH
Confidence 999777667777777777654
No 263
>PLN02624 ornithine-delta-aminotransferase
Probab=99.57 E-value=7.1e-13 Score=144.13 Aligned_cols=273 Identities=15% Similarity=0.179 Sum_probs=160.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcc---------CCC-EEEEcCCCccchHHHHHhhc------ccC---CcEEEEeCCCC
Q 009604 214 GAESTVIMASGMSASTVMLLALVP---------AGG-HIVTTTDCYRKTRIFIETVL------PKM---GITATVIDPAD 274 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~---------pGD-~VIv~~~~y~~t~~~~~~~l------~~~---Gi~v~~vd~~d 274 (531)
+.+.+++++||++|+..+++.... +++ .|+.....|++......... ..+ ...+.+++..|
T Consensus 131 ~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d 210 (474)
T PLN02624 131 GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGD 210 (474)
T ss_pred CCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCC
Confidence 446899999999999999863321 133 46666666766421111110 001 11234567778
Q ss_pred HHHHHHhccC--CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCc------cccccccCCcEEE
Q 009604 275 MEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL------NQKALSLGADLVL 342 (531)
Q Consensus 275 ~e~Le~al~~--~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~------~~~~l~~gaDivv 342 (531)
++.+++.++. .++++|++|.++|++|.+++ +++|.++|++||+++|+||++.... .........|+++
T Consensus 211 ~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~ 290 (474)
T PLN02624 211 LDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVI 290 (474)
T ss_pred HHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEE
Confidence 9999998853 25899999999999999987 9999999999999999999985211 1111223467777
Q ss_pred ECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCc
Q 009604 343 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 343 ~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~p~v 420 (531)
++|.+++.+. ..|++++++++++.+...........++..+..+...++.+.. ..++..+....+.+.|++...
T Consensus 291 --lsK~lggG~~-pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~- 366 (474)
T PLN02624 291 --LGKALGGGVI-PVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQK- 366 (474)
T ss_pred --ecccccCCCC-cceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH-
Confidence 5799986543 3577777877776654322111112355555555555655432 122223333444444443100
Q ss_pred eEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHH
Q 009604 421 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 497 (531)
Q Consensus 421 ~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~---~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~ 497 (531)
.+|.. -...+|.|.++.|+++.. ...+..+.+.|...++.+..+
T Consensus 367 ---~~~~~---------i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~--------------------- 413 (474)
T PLN02624 367 ---QFPKL---------IKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPT--------------------- 413 (474)
T ss_pred ---hCCCc---------eEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecC---------------------
Confidence 01100 011234677888888532 234567777775545433211
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 498 RLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 498 ~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
.++.|||+..+..+++.++.+.+.|+
T Consensus 414 ------~~~~lR~~p~l~~t~e~id~~l~~L~ 439 (474)
T PLN02624 414 ------HDTIIRLAPPLSISEDELQECSKALS 439 (474)
T ss_pred ------CCCEEEEECCccCCHHHHHHHHHHHH
Confidence 14679999766555555555554443
No 264
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.56 E-value=3e-13 Score=140.06 Aligned_cols=267 Identities=18% Similarity=0.212 Sum_probs=170.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc----C-CCEEEEcCCCccc-hHHH--------HHhhcccCCcEEEEeCCCCHHHHHH
Q 009604 215 AESTVIMASGMSASTVMLLALVP----A-GGHIVTTTDCYRK-TRIF--------IETVLPKMGITATVIDPADMEGLEA 280 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~----p-GD~VIv~~~~y~~-t~~~--------~~~~l~~~Gi~v~~vd~~d~e~Le~ 280 (531)
.+.+++++||++|+..++...-+ + .-+||.....|++ |... ++..+...--.+.+++.+|++++++
T Consensus 100 ~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ 179 (404)
T COG4992 100 ADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEA 179 (404)
T ss_pred ccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHH
Confidence 67899999999999999975422 2 2367777777665 2211 1111211112356778889999999
Q ss_pred hccCCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCC----Ccc--ccccccCCcEEEECCccccc
Q 009604 281 ALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIG 350 (531)
Q Consensus 281 al~~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~----~~~--~~~l~~gaDivv~S~sK~lg 350 (531)
++++ +|.+|++|...-..|.+++ ++++.++|++||+++|.||++.. +-. ......-.||++ +.|.+|
T Consensus 180 ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~t--laK~Lg 256 (404)
T COG4992 180 AIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILT--LAKALG 256 (404)
T ss_pred Hhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEE--eecccc
Confidence 9999 4999999999999998875 78999999999999999999743 111 222233467776 789999
Q ss_pred cCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 351 GHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 351 g~g~v~gG~iv~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
|. ...|+++.++++.+.+... .+|++ -+|..+......++.+.. -+++..+....+.+.|++.. ..||
T Consensus 257 GG--~PigA~la~~~~~~~~~~G--~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~----~~~~ 328 (404)
T COG4992 257 GG--FPIGAMLATEEIASAFTPG--DHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELK----RRYP 328 (404)
T ss_pred CC--ccceeeEEchhhhhcCCCC--cccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHh----hcCC
Confidence 76 4567777775544443322 22332 256777766666666532 23333344444555555431 1222
Q ss_pred CCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCC
Q 009604 427 GLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDN 506 (531)
Q Consensus 427 gl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~ 506 (531)
- -++.+|.|-|+.+++.... .+..++..+...++-+. ++ .++
T Consensus 329 ~----------v~~vRG~GLmiGiel~~~~-~a~~~~~~~~~~gvL~~----------~a-----------------~~~ 370 (404)
T COG4992 329 L----------VKEVRGRGLMIGIELKEPY-RARDIVRALREEGVLVL----------PA-----------------GPN 370 (404)
T ss_pred c----------eeeeecceeEEEEEecCcc-cHHHHHHHHHHCCeEEe----------cC-----------------CCC
Confidence 1 1334678899999997532 46677777765442111 11 245
Q ss_pred eEEEEecC----CCHHHHHHHHHHHHHh
Q 009604 507 LVRFSFGV----EDFEDLKADVLQALHA 530 (531)
Q Consensus 507 lIRlSvGl----E~~edli~dL~~AL~~ 530 (531)
.|||.--+ |+.++.++.|+++|+.
T Consensus 371 ViR~~PpL~i~~eei~~~~~~l~~~l~~ 398 (404)
T COG4992 371 VIRFLPPLVITEEEIDEALDALERALAA 398 (404)
T ss_pred eEEecCCccCCHHHHHHHHHHHHHHHHH
Confidence 78888655 6667777777777763
No 265
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.56 E-value=2e-13 Score=143.48 Aligned_cols=267 Identities=12% Similarity=0.056 Sum_probs=160.0
Q ss_pred cEEEe-CChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCC
Q 009604 217 STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 295 (531)
Q Consensus 217 ~~i~~-sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP 295 (531)
+++++ +||+.++++++..++.+ +.+++..-.|+....-........+ ++..++....+.++..+++ ++++|.+.+-
T Consensus 61 ~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~lV~~~h~ 137 (361)
T TIGR01366 61 EVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEPQADP-GVDVIAWAHN 137 (361)
T ss_pred eEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCCccCC-CCCEEEEccc
Confidence 46665 56899999999998743 3444444556544332223222233 4455543322344444555 4999999999
Q ss_pred CCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-ccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh
Q 009604 296 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH 374 (531)
Q Consensus 296 ~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~ 374 (531)
.|.||.+.|+++| +|++|++++||.++..+.. .+.. .+|++++|.+|+++++++ .++++.++++++++....
T Consensus 138 et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~--~~D~~~~s~~K~lg~~~G--l~~~~~s~~~~~~~~~~~ 210 (361)
T TIGR01366 138 ETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIA--ETDVYYFAPQKNFASDGG--LWLAIMSPAALERIEAIA 210 (361)
T ss_pred CCccceecccccc---cccCCCeEEEEcCccccCCCCCHH--HCCEEEEEchhhcCCCCc--eEEEEECHHHHhhhhccc
Confidence 9999999999888 5889999999999876543 2322 289999999999999863 455667887776654210
Q ss_pred ----------h-----------hcCCCchHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHcCCCceEEeCCC
Q 009604 375 ----------H-----------VLGGALNPNAAYLIIRGMKTL------HLRVQQQNSTALRMAKILEAHPKVKRVHYPG 427 (531)
Q Consensus 375 ----------~-----------~~G~~~s~~~a~l~l~~L~tl------~~r~~~~~~na~~La~~L~~~p~v~~V~~pg 427 (531)
. ....+.+....+.+..+++.+ +.+.+++.+.++.+.++|.+.+.++. ..+.
T Consensus 211 ~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~-~~~~ 289 (361)
T TIGR01366 211 ASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATP-FVTD 289 (361)
T ss_pred CCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCccc-CCCC
Confidence 0 001122222222333344433 33456667778888888888765421 1111
Q ss_pred CCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009604 428 LKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 507 (531)
Q Consensus 428 l~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~l 507 (531)
+... ...-.+++| .++ .....+.+.|+..++.+..|. . .+ .++.
T Consensus 290 ----~~~~------s~~v~~v~~-~~g--~~~~~v~~~L~~~gI~i~~~~-------------~--------~l--~~~~ 333 (361)
T TIGR01366 290 ----PGKR------SQVVGTIDF-VDD--IDAATVAKILRANGIVDTEPY-------------R--------KL--GRNQ 333 (361)
T ss_pred ----hhhc------ccceEEEEC-CCc--cCHHHHHHHHHHCCCeeccCc-------------c--------cc--CCCc
Confidence 1100 011234555 232 234455555654454442210 0 01 2457
Q ss_pred EEEEecCCCHHHHHHHHHHHHHh
Q 009604 508 VRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 508 IRlSvGlE~~edli~dL~~AL~~ 530 (531)
+|+|++.+++++.|+.|.++|+.
T Consensus 334 vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 334 LRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999998888864
No 266
>PLN00144 acetylornithine transaminase
Probab=99.56 E-value=9.7e-13 Score=139.33 Aligned_cols=263 Identities=14% Similarity=0.168 Sum_probs=157.1
Q ss_pred CcEEEeCChHHHHHHHHHHhc---c------C------CCEEEEcCCCccchHHHHHhhcc------cC---CcEEEEeC
Q 009604 216 ESTVIMASGMSASTVMLLALV---P------A------GGHIVTTTDCYRKTRIFIETVLP------KM---GITATVID 271 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all---~------p------GD~VIv~~~~y~~t~~~~~~~l~------~~---Gi~v~~vd 271 (531)
+.+++++||++|+..+++... . + ..+|+.-...|++........-. .+ --.+.+++
T Consensus 73 ~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~ 152 (382)
T PLN00144 73 DRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVE 152 (382)
T ss_pred CeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeC
Confidence 578999999999999987432 1 0 24688888777774322111100 01 11245667
Q ss_pred CCCHHHHHHhccCCCcEEEEEeCCCCCCCccc--C--HHHHHHHHHhcCCEEEEeCCCCCCcc------ccccccCCcEE
Q 009604 272 PADMEGLEAALNNNNVSLFFTESPTNPFLRCV--D--VKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLGADLV 341 (531)
Q Consensus 272 ~~d~e~Le~al~~~~tklV~lesP~NPtG~v~--d--l~~I~~la~~~gi~lIvD~a~a~~~~------~~~l~~gaDiv 341 (531)
..|++++++.+.++++++|++|...||.|... . +++|.++|++||+++|+||++..... ........|
T Consensus 153 ~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-- 230 (382)
T PLN00144 153 YGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-- 230 (382)
T ss_pred CCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC--
Confidence 77899999988655689999998899955543 2 78999999999999999999653211 112233456
Q ss_pred EECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH----HHH
Q 009604 342 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAK----ILE 415 (531)
Q Consensus 342 v~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~----~L~ 415 (531)
+.+++|.+++. ...|++++++++++.+...........+|..+..+...|+.+.. ..++..+..+.+.+ .+.
T Consensus 231 i~t~sK~l~~G--~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~ 308 (382)
T PLN00144 231 IMTLAKPLAGG--LPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLG 308 (382)
T ss_pred EEEecccccCC--cceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh
Confidence 55689999864 45788889988887765432222223456666555544544421 11222222233333 333
Q ss_pred cCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCH
Q 009604 416 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 495 (531)
Q Consensus 416 ~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~ 495 (531)
++|.+.. .+|.|.++++++.. ....|.+.+...++.+..+
T Consensus 309 ~~~~~~~------------------vrg~G~~~~l~l~~---~~~~~~~~~~~~Gv~i~~~------------------- 348 (382)
T PLN00144 309 GNPHVKE------------------VRGVGLLVGIQLDV---PAGPLVDACRDSGLLVLTA------------------- 348 (382)
T ss_pred hCCCcee------------------eecCceEEEEEecC---ccHHHHHHHHHCCeEEeec-------------------
Confidence 3332222 23467899999942 2345666665444333211
Q ss_pred HHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHH
Q 009604 496 SERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 529 (531)
Q Consensus 496 ~~~~~~gi~~~lIRlSvGlE----~~edli~dL~~AL~ 529 (531)
+ .++.|||+.++- +.+..++.|+++|.
T Consensus 349 ------~-~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~ 379 (382)
T PLN00144 349 ------G-KGDVVRLVPPLVISEAELEQAVEILADCLP 379 (382)
T ss_pred ------C-CCCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 0 136899999983 33444455555554
No 267
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.55 E-value=8e-13 Score=140.24 Aligned_cols=210 Identities=19% Similarity=0.217 Sum_probs=143.4
Q ss_pred CCCccCCCCCCCCC----------CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 009604 200 ASFEYGRYGNPTTV----------GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 269 (531)
Q Consensus 200 ~~~~Y~R~gnPt~~----------g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~ 269 (531)
+.-.|. |.|+.. |.++++.++||+.|+.++....++|||+| +.+.|..+.... ....|.....
T Consensus 63 GDe~ya--g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ah---Ie~~Gav~vD 135 (450)
T TIGR02618 63 GDEAYA--GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYH---QEKNGATFVD 135 (450)
T ss_pred cchhhc--CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHH---HHhCCeEEEe
Confidence 334565 788776 89999999999999888777778999977 566775554321 1223443222
Q ss_pred e--C-------------CCCHHHHHHhccCC---CcEEEEEeCCCCCC-Cccc---CHHHHHHHHHhcCCEEEEeCCCCC
Q 009604 270 I--D-------------PADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFAT 327 (531)
Q Consensus 270 v--d-------------~~d~e~Le~al~~~---~tklV~lesP~NPt-G~v~---dl~~I~~la~~~gi~lIvD~a~a~ 327 (531)
+ + ..|+++|+++|++. ++++|.+++++|.. |.++ ++++|.++|++||++||.|.+...
T Consensus 136 i~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~ 215 (450)
T TIGR02618 136 IIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCV 215 (450)
T ss_pred eecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 2 1 12799999999863 35689999999976 7884 578999999999999999999533
Q ss_pred --Cc---------ccccc-------ccCCcEEEECCccccccCCCceEEEEE-eChHHHHHHHHHhhhcCC-----CchH
Q 009604 328 --PL---------NQKAL-------SLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGG-----ALNP 383 (531)
Q Consensus 328 --~~---------~~~~l-------~~gaDivv~S~sK~lgg~g~v~gG~iv-~~~~li~~l~~~~~~~G~-----~~s~ 383 (531)
.+ ...+. -..+|.++.|+.|..+.+ +||+++ .+++++++++.+...+++ .++.
T Consensus 216 gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~ 292 (450)
T TIGR02618 216 ENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAG 292 (450)
T ss_pred hChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHHHHhhhcCCccccCchhh
Confidence 11 11122 236899999999998876 378888 577889998887655533 2222
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHcCCCc
Q 009604 384 NAAYLIIRGMKTLHLR--VQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 384 ~~a~l~l~~L~tl~~r--~~~~~~na~~La~~L~~~p~v 420 (531)
.....+..+|+..-.+ .++...++++|++.|.+. +|
T Consensus 293 r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~-Gv 330 (450)
T TIGR02618 293 RDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA-GV 330 (450)
T ss_pred hhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 2222223355543332 344446699999999876 44
No 268
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.54 E-value=4.3e-12 Score=130.86 Aligned_cols=272 Identities=18% Similarity=0.191 Sum_probs=165.7
Q ss_pred cEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----CHHHHHHhccCC-------
Q 009604 217 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----DMEGLEAALNNN------- 285 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----d~e~Le~al~~~------- 285 (531)
+.+++++-+.++..+++.+++.||+|++....|.+.. ...+..|+++..++.+ ++|.|++.+...
T Consensus 126 diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL----~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~ 201 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSAL----QSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKK 201 (472)
T ss_pred eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHH----HhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccC
Confidence 3444444459999999999999999999999998865 3456678887777643 788898887543
Q ss_pred -CcEEEEE-eCCCCCCCcccCH---HHHHHHHHhcCCEEEEeCCCCCC----cc--------------------cccccc
Q 009604 286 -NVSLFFT-ESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATP----LN--------------------QKALSL 336 (531)
Q Consensus 286 -~tklV~l-esP~NPtG~v~dl---~~I~~la~~~gi~lIvD~a~a~~----~~--------------------~~~l~~ 336 (531)
+.++.|. .+-+||||....+ ++|.+||++|++++|+|+.|... +. ...+.+
T Consensus 202 ~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflsl 281 (472)
T KOG0634|consen 202 PKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSL 281 (472)
T ss_pred CCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccc
Confidence 2445553 4556999999875 58999999999999999995421 00 001111
Q ss_pred ---CCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHH---------HHHHHHHHHHHHHHHHHHH
Q 009604 337 ---GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNA---------AYLIIRGMKTLHLRVQQQN 404 (531)
Q Consensus 337 ---gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~---------a~l~l~~L~tl~~r~~~~~ 404 (531)
|..|-..||||.++++ +..|++.+++.+++++...........+.+. .|....-++.+..-.....
T Consensus 282 DtdGrVIr~dSFSKiiaPG--lRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt 359 (472)
T KOG0634|consen 282 DTDGRVIRNDSFSKIIAPG--LRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYT 359 (472)
T ss_pred cccccEEeccchhhhhcCc--ceeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3447788999999875 3579999999888887654433222222221 1211111122221112222
Q ss_pred HHHHHHHHHHHcC-CCc-eEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc-------CCHHHHHHHHHHc-CCCCcccc
Q 009604 405 STALRMAKILEAH-PKV-KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD-------GDLTATIKFIDAL-KIPYIAPS 474 (531)
Q Consensus 405 ~na~~La~~L~~~-p~v-~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~-------g~~~~~~~fl~~L-~~~~iavS 474 (531)
..+..+...|.+. |.- ..+.-|. .|.+++|+++ .+..+++.++... ...++-+-
T Consensus 360 ~Rrn~~l~Al~kylp~~~~~~~~P~----------------aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v 423 (472)
T KOG0634|consen 360 ERRNALLSALDKYLPKSVCEYHPPK----------------AGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLV 423 (472)
T ss_pred HHHHHHHHHHHHhCCCCeeEEecCC----------------cceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEe
Confidence 3333344444432 433 3333332 5778999996 3334444444332 33455555
Q ss_pred cCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHH
Q 009604 475 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQ 526 (531)
Q Consensus 475 ~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~ 526 (531)
.|..+... |... -..-++|+|+.+-+.|++.+.+++
T Consensus 424 ~G~~F~v~--p~~s--------------~~kiffRls~a~a~~e~l~~g~~r 459 (472)
T KOG0634|consen 424 CGSWFMVD--PESS--------------WSKIFFRLSIAFAEPEKLDEGIER 459 (472)
T ss_pred cCceeEEc--CccC--------------CCcceEEEEeecCCHHHHHHHHHH
Confidence 56544321 2110 012489999999888877766654
No 269
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.53 E-value=1.7e-12 Score=139.22 Aligned_cols=177 Identities=18% Similarity=0.223 Sum_probs=116.5
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhh-------c---------ccCCcEEEEeCCCCHHH
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV-------L---------PKMGITATVIDPADMEG 277 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~-------l---------~~~Gi~v~~vd~~d~e~ 277 (531)
+.+++++||++|+..+++... ...++||...+.|++....+... . ...+..+..++..|+++
T Consensus 105 ~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 184 (423)
T TIGR00713 105 EMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEA 184 (423)
T ss_pred cEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHH
Confidence 578999999999999887532 34589999999888853222110 0 00011233445568999
Q ss_pred HHHhccC--CCcEEEEEe-CCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc-----ccccccCCcEEEECC
Q 009604 278 LEAALNN--NNVSLFFTE-SPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSA 345 (531)
Q Consensus 278 Le~al~~--~~tklV~le-sP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~-----~~~l~~gaDivv~S~ 345 (531)
|++++++ .++++|++| .|+| +|.+.+ +++|.++|++||+++|+||++..... ........|++ ++
T Consensus 185 l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~--t~ 261 (423)
T TIGR00713 185 LEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPDLT--TL 261 (423)
T ss_pred HHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcchh--hh
Confidence 9998862 248999998 6666 788776 78999999999999999999743211 11122235654 69
Q ss_pred ccccccCCCceEEEEEeChHHHHHHHHHhh-hcC--CCchHHHHHHHHHHHHHHH
Q 009604 346 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTLH 397 (531)
Q Consensus 346 sK~lgg~g~v~gG~iv~~~~li~~l~~~~~-~~G--~~~s~~~a~l~l~~L~tl~ 397 (531)
+|.+++ | ..+|++++++++++.+..... ..+ ...++..+..++..++.+.
T Consensus 262 sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~ 314 (423)
T TIGR00713 262 GKIIGG-G-LPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLD 314 (423)
T ss_pred hhhhcC-C-CceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHh
Confidence 999984 3 457889999988887753211 111 1345666665555565443
No 270
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.51 E-value=5e-13 Score=131.33 Aligned_cols=268 Identities=20% Similarity=0.263 Sum_probs=176.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHH-HHHHhccCCCcEEEEE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME-GLEAALNNNNVSLFFT 292 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e-~Le~al~~~~tklV~l 292 (531)
+.|++|++.+|..|+..++.+++.|.|.|+.+...|.+...-+ .++++++ .+|..|++ .+.++.+. +.|+|..
T Consensus 126 ~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGi-rLckry~----h~dv~~l~~~l~~a~k~-r~klv~T 199 (417)
T KOG1359|consen 126 GREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGI-RLCKRYR----HVDVFDLEHCLISACKM-RLKLVVT 199 (417)
T ss_pred CCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhh-HHHhhhc----cchhHHHHHHHHHhhhh-eEEEEEe
Confidence 7899999999999999999999999999999888888876655 3455433 33433433 23334443 5899999
Q ss_pred eCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccc-------c--ccCCcEEEECCccccccCCCceEEEEEeC
Q 009604 293 ESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-------L--SLGADLVLHSATKFIGGHNDVLAGSISGS 363 (531)
Q Consensus 293 esP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~-------l--~~gaDivv~S~sK~lgg~g~v~gG~iv~~ 363 (531)
....++.|.+.|+++|.+++++||.+|++||++++++...- + .-.+|++..++.|.+||.. ||+..++
T Consensus 200 Dg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~---GGyttgp 276 (417)
T KOG1359|consen 200 DGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGAS---GGYTTGP 276 (417)
T ss_pred cceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCC---CCCccCC
Confidence 99999999999999999999999999999999988754211 1 1237899999999999765 8999999
Q ss_pred hHHHHHHHHHhh--hcCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhh
Q 009604 364 GKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIAT 438 (531)
Q Consensus 364 ~~li~~l~~~~~--~~G~~~s~~~a~l~l~~L~tl---~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~ 438 (531)
++++..+++..+ .+...++|...-...+.++-+ ...+++.+.+.+++.++.+.. ++. ..+ .+||
T Consensus 277 ~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a-Gft---Isg-~~hP------ 345 (417)
T KOG1359|consen 277 KPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA-GFT---ISG-ASHP------ 345 (417)
T ss_pred hhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-Cce---ecC-CCCC------
Confidence 999988876433 345555543222222222211 222344456666666666542 211 111 1232
Q ss_pred hhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHH
Q 009604 439 QQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFE 518 (531)
Q Consensus 439 ~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~e 518 (531)
+..+.+ |+.+.+.++-+.|-..++-+- | +.+|.. |+ ....||+.+..-+++
T Consensus 346 --------I~pv~l-Gda~lA~~~ad~lLk~Gi~Vi-g-----fs~PvV------P~--------gkariRVqiSAaHt~ 396 (417)
T KOG1359|consen 346 --------ICPVML-GDARLASKMADELLKRGIYVI-G-----FSYPVV------PK--------GKARIRVQISAAHTE 396 (417)
T ss_pred --------ccceec-ccHHHHHHHHHHHHhcCceEE-e-----ecCCcC------CC--------CceEEEEEEehhcCH
Confidence 455556 555666666666633232111 1 112211 11 245689999888888
Q ss_pred HHHHHHHHHHHh
Q 009604 519 DLKADVLQALHA 530 (531)
Q Consensus 519 dli~dL~~AL~~ 530 (531)
+.|+.+.+|+..
T Consensus 397 edid~~i~Af~~ 408 (417)
T KOG1359|consen 397 EDIDRLIEAFSE 408 (417)
T ss_pred HHHHHHHHHHHH
Confidence 888888888753
No 271
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.50 E-value=1e-11 Score=133.71 Aligned_cols=273 Identities=15% Similarity=0.125 Sum_probs=167.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcc----CC-CEEEEcCCCccchHHHHHhh-----c-ccC---CcEEEEeCCCCHHHHHHh
Q 009604 216 ESTVIMASGMSASTVMLLALVP----AG-GHIVTTTDCYRKTRIFIETV-----L-PKM---GITATVIDPADMEGLEAA 281 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~----pG-D~VIv~~~~y~~t~~~~~~~-----l-~~~---Gi~v~~vd~~d~e~Le~a 281 (531)
+.+++++||++|+..+++.... .| .+||.....|++.....-.. . +.+ .-.+..++..|.+++++.
T Consensus 135 ~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~ 214 (442)
T TIGR03372 135 KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKA 214 (442)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHH
Confidence 4688899999999999874321 23 57888887777643221111 0 111 112455677788888777
Q ss_pred ccC-----CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----c--cccccccCCcEEEECCc
Q 009604 282 LNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----L--NQKALSLGADLVLHSAT 346 (531)
Q Consensus 282 l~~-----~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~----~--~~~~l~~gaDivv~S~s 346 (531)
++. .++.+|++|.....-|.+.+ +++|.++|++||+++|+||++... . .......-.|+++ +.
T Consensus 215 l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt--~g 292 (442)
T TIGR03372 215 LNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILC--LA 292 (442)
T ss_pred HHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeee--eh
Confidence 741 24899999999888888887 999999999999999999997321 1 1122233468876 89
Q ss_pred cccccCCCceEEEEEeChHHHHHHHHHhhhcCCCc--hHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHcCCCceE
Q 009604 347 KFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLR--VQQQNSTALRMAKILEAHPKVKR 422 (531)
Q Consensus 347 K~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~--s~~~a~l~l~~L~tl~~r--~~~~~~na~~La~~L~~~p~v~~ 422 (531)
|.+++. -...|++++++++.+.+......++.+. +|..+..++..|+.+... .++..+.-+++.+.|++..
T Consensus 293 K~lg~G-~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~---- 367 (442)
T TIGR03372 293 KALGGG-VMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLA---- 367 (442)
T ss_pred hhhcCC-cccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH----
Confidence 999853 1125666678888777632111234444 577776666667665421 2222333344444443320
Q ss_pred EeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcC
Q 009604 423 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 502 (531)
Q Consensus 423 V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~g 502 (531)
-.+|.. -...+|.|.|+.+++..+ +....+.+.|...++-++.. +
T Consensus 368 ~~~~~~---------i~~vRG~Gl~~giel~~~-~~~~~i~~~l~~~Gvl~~~~-------------------------~ 412 (442)
T TIGR03372 368 AEYPDL---------IIEARGKGLLMAIEFRDN-EIGYAFAKELFQQNILVAGT-------------------------L 412 (442)
T ss_pred HhCCCc---------eEEEecceEEEEEEeCCh-HHHHHHHHHHHHCCcEEeec-------------------------C
Confidence 011100 011246788999999643 44566777765544332210 0
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 503 IMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 503 i~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
...+.|||+.-+-.+++.++.+.++|++
T Consensus 413 ~~~~~lr~~Ppl~~t~~~id~~~~~l~~ 440 (442)
T TIGR03372 413 NNAKSIRIEPPLTITIEQCALVIKAAKD 440 (442)
T ss_pred CCCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 0136899999988888888888887764
No 272
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=4e-12 Score=130.22 Aligned_cols=197 Identities=21% Similarity=0.243 Sum_probs=136.9
Q ss_pred CCCcE-EEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCC--cEEEEe--C----CCCHHHHHHhccC
Q 009604 214 GAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVI--D----PADMEGLEAALNN 284 (531)
Q Consensus 214 g~e~~-i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~G--i~v~~v--d----~~d~e~Le~al~~ 284 (531)
|++.+ +=-.||+.|+.+++.++++|||+|+-.+..+++-..--.. ....| .++..+ | ..|.|++++.+.+
T Consensus 86 ga~~anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~-v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e 164 (413)
T COG0112 86 GAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSP-VNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKE 164 (413)
T ss_pred CCCccccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCC-CCccceeEEeEecccccccCccCHHHHHHHHHH
Confidence 44433 3367999999999999999999999998888773211000 00111 122222 2 2388999998887
Q ss_pred CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCC-----CCccccccccCCcEEEECCccccccCCCceEEE
Q 009604 285 NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA-----TPLNQKALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 285 ~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a-----~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
.++|+|++- .+-.-...|.+++.++|++.|++|++|-++- .+..++|+.+ +|+|..|.||.|.|+. ||+
T Consensus 165 ~kPK~ii~G--~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-AdvVTtTTHKTlrGPr---GG~ 238 (413)
T COG0112 165 VKPKLIIAG--GSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-ADVVTTTTHKTLRGPR---GGI 238 (413)
T ss_pred hCCCEEEEC--ccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-cceEeCCcccCCCCCC---ceE
Confidence 789999873 3345678899999999999999999999953 4566789988 9999999999999985 899
Q ss_pred EEeCh-HHHHHHHHHh--hhcCCCchHHHHHH---HHHHHH-HHHHHHHHHHHHHHHHHHHHHcC
Q 009604 360 ISGSG-KLVTQIRNLH--HVLGGALNPNAAYL---IIRGMK-TLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 360 iv~~~-~li~~l~~~~--~~~G~~~s~~~a~l---~l~~L~-tl~~r~~~~~~na~~La~~L~~~ 417 (531)
|..++ ++.+++.... ...|+-+.-..|.. +...++ .+....++..+|++.|++.|.++
T Consensus 239 Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~ 303 (413)
T COG0112 239 ILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER 303 (413)
T ss_pred EEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc
Confidence 99985 7777776532 12232211111111 112222 23455667779999999999875
No 273
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.48 E-value=1.2e-11 Score=131.63 Aligned_cols=262 Identities=13% Similarity=0.088 Sum_probs=156.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhc------cCC-CEEEEcCCCccch-HHHHHhhcccC---------CcEEEEeCCCCHHH
Q 009604 215 AESTVIMASGMSASTVMLLALV------PAG-GHIVTTTDCYRKT-RIFIETVLPKM---------GITATVIDPADMEG 277 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all------~pG-D~VIv~~~~y~~t-~~~~~~~l~~~---------Gi~v~~vd~~d~e~ 277 (531)
.+.+++++||++|+..+++... ++| ++||+.+..|++. ...+. ..... -..+..++..|+++
T Consensus 93 ~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~d~~~ 171 (395)
T PRK03715 93 FDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMS-ASGKPGWDTIFAPQVPGFPKAELNDIAS 171 (395)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHh-hcCCcccccCCCCCCCCceeeCCchHHH
Confidence 3679999999999999997664 123 5677777666653 32221 11100 01122334568999
Q ss_pred HHHhccCCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----c--cccccccCCcEEEECCcc
Q 009604 278 LEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----L--NQKALSLGADLVLHSATK 347 (531)
Q Consensus 278 Le~al~~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~----~--~~~~l~~gaDivv~S~sK 347 (531)
+++.+.+ ++++|++|...+..|.+.+ +++|.++|++||+++|+||++... . .........|+++ ++|
T Consensus 172 l~~~l~~-~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t--~gK 248 (395)
T PRK03715 172 VEKLITD-KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMT--LGK 248 (395)
T ss_pred HHHHcCC-CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceee--ehh
Confidence 9999976 4999999998888888877 999999999999999999997531 1 1122233468765 679
Q ss_pred ccccCCCceEEEEEeChHHHHHHHHHhhhcCC--CchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCceEE
Q 009604 348 FIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRV 423 (531)
Q Consensus 348 ~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~--~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~p~v~~V 423 (531)
.+++. ...|++++++++..... ...+. ..+|..+..++..|+.+.. .+++..+....+.+.|++...
T Consensus 249 ~lg~G--~p~~av~~~~~i~~~~~---~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~---- 319 (395)
T PRK03715 249 GIGGG--VPLAALLAKAEVAVFEA---GDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSE---- 319 (395)
T ss_pred hhhCC--cceEEEEEccccccccC---CCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh----
Confidence 99863 34667777777642111 11122 2346666666666666542 234444555555555553210
Q ss_pred eCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC---CcccccCCcccccccCccccccCCCHHHHHh
Q 009604 424 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP---YIAPSFGGCESIVDQPAIMSYWDLSQSERLK 500 (531)
Q Consensus 424 ~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~---~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~ 500 (531)
.++ + ...+|.|.|+.+++... ...++.+.++.. ++-+. +
T Consensus 320 ~~~-i----------~~vrG~Glm~~i~l~~~--~~~~~~~~~~~~~~~Gi~~~----------~--------------- 361 (395)
T PRK03715 320 ERG-L----------EGERGEGLLRALLLGKD--IGPQIVEKARDMQPDGLLLN----------A--------------- 361 (395)
T ss_pred cCC-c----------CeEEcceeEEEEEecCc--hHHHHHHHHHhccCCCEEEe----------e---------------
Confidence 011 1 11245788999999642 222333332211 21110 0
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 501 YGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 501 ~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
...+.|||+..+-.+++.|+.+.++|+
T Consensus 362 --~~~~~lR~~p~l~~t~~ei~~~~~~l~ 388 (395)
T PRK03715 362 --PRPNLLRFMPALNVTTEEIDQMIAMLR 388 (395)
T ss_pred --cCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 113579999998776666666665554
No 274
>PRK15029 arginine decarboxylase; Provisional
Probab=99.47 E-value=1.6e-12 Score=146.46 Aligned_cols=160 Identities=15% Similarity=0.174 Sum_probs=122.7
Q ss_pred CCCcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----------C-----HHH
Q 009604 214 GAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----------D-----MEG 277 (531)
Q Consensus 214 g~e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----------d-----~e~ 277 (531)
|++++.|..+|+ .+|.+++++++++||.|++++++|.+.+..+ ...|+...++.+. + ++.
T Consensus 219 gA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al----~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~ 294 (755)
T PRK15029 219 GADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGL----ILTGAKPVYMVPSRNRYGIIGPIYPQEMQPET 294 (755)
T ss_pred CCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHH----HHcCCeEEEecccccccCCccCCCccccCHHH
Confidence 899999999998 8899999999999999999999999987543 3457777777531 3 788
Q ss_pred HHHhccCC-CcE--------EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc------cc-ccc-----c-
Q 009604 278 LEAALNNN-NVS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQ-KAL-----S- 335 (531)
Q Consensus 278 Le~al~~~-~tk--------lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~------~~-~~l-----~- 335 (531)
++++|+++ .+| ++++.+|+ ..|.+.|+++|+++||++|++|+|||+|+..+ +. .++ .
T Consensus 295 i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~ 373 (755)
T PRK15029 295 LQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDH 373 (755)
T ss_pred HHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEEEECccccccccCcccccccccccccccc
Confidence 98888543 134 89998887 68999999999999999999999999987532 21 333 3
Q ss_pred cCCc-EEEECCccccccCCCceEEEEEeChH--H--HHHHHHHhhhcCCC
Q 009604 336 LGAD-LVLHSATKFIGGHNDVLAGSISGSGK--L--VTQIRNLHHVLGGA 380 (531)
Q Consensus 336 ~gaD-ivv~S~sK~lgg~g~v~gG~iv~~~~--l--i~~l~~~~~~~G~~ 380 (531)
.|+| ++++|+||.+++.. .+.++-.+.. . .++++.....+.++
T Consensus 374 ~Gad~~vvqStHKtL~alT--QaS~LHv~~~~~~id~~r~~~~l~~~qST 421 (755)
T PRK15029 374 NGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATT 421 (755)
T ss_pred CCCceEEEEchhhcccchh--hhhhheeCCCccccCHHHHHHHHHHHcCC
Confidence 6898 99999999998764 3445544332 2 25666666655544
No 275
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.47 E-value=1.2e-11 Score=132.08 Aligned_cols=238 Identities=18% Similarity=0.143 Sum_probs=141.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcc--------CC-CEEEEcCCCccchHHHHHhhc--c----cC---CcEEEEeCCCCHHH
Q 009604 216 ESTVIMASGMSASTVMLLALVP--------AG-GHIVTTTDCYRKTRIFIETVL--P----KM---GITATVIDPADMEG 277 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~--------pG-D~VIv~~~~y~~t~~~~~~~l--~----~~---Gi~v~~vd~~d~e~ 277 (531)
+.+++++||++|+..+++.... ++ .+|+.....|++......... . .+ .-.+.+++..|++.
T Consensus 99 ~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 178 (408)
T PRK04612 99 EKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEA 178 (408)
T ss_pred CEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHH
Confidence 5789999999999999864321 12 368888877777432211110 0 01 11234566778999
Q ss_pred HHHhccCCCcEEEEEeCCCCCCCcccC-----HHHHHHHHHhcCCEEEEeCCCCCCcc----ccccccCCcEEEECCccc
Q 009604 278 LEAALNNNNVSLFFTESPTNPFLRCVD-----VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSLGADLVLHSATKF 348 (531)
Q Consensus 278 Le~al~~~~tklV~lesP~NPtG~v~d-----l~~I~~la~~~gi~lIvD~a~a~~~~----~~~l~~gaDivv~S~sK~ 348 (531)
+++++.++++.+|++| |.+++|.+.+ +++|.++|+++|+++|+||++..... ......+.+..+.+++|.
T Consensus 179 l~~~~~~~~~aavi~e-P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~ 257 (408)
T PRK04612 179 LEAAMAGGDVAAVMLE-PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKA 257 (408)
T ss_pred HHHhhCCCCEEEEEEC-CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcch
Confidence 9999975456677765 4555654433 78999999999999999999753211 111123445556678999
Q ss_pred cccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 349 IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 349 lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
+++ | ...|++++++++.+.+...........+|..+..+...|+.+.. ..++..+..+++.+.|++... .++
T Consensus 258 l~~-G-~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~----~~~ 331 (408)
T PRK04612 258 LGG-G-FPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNA----EFG 331 (408)
T ss_pred hcC-C-CceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----hCC
Confidence 985 3 34667777777777665432222223456666666666665532 233344444455555543210 011
Q ss_pred CCCCCchhhhhhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCC
Q 009604 427 GLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPY 470 (531)
Q Consensus 427 gl~s~p~~~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl~~L~~~~ 470 (531)
.. ...+|.|.|+.+++... ...+..+.+.+...+
T Consensus 332 ~i----------~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~G 366 (408)
T PRK04612 332 VF----------AQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHG 366 (408)
T ss_pred Ce----------eeeeccceEEEEEecCchhhHHHHHHHHHHHCC
Confidence 10 12256788999998532 234566777765544
No 276
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.46 E-value=1.8e-11 Score=134.15 Aligned_cols=203 Identities=16% Similarity=0.138 Sum_probs=132.1
Q ss_pred CcEEEeCChHHHHHHHHHHh----cc----------------------CCCEEEEcCCCccchHHHHHhhcccCCc---E
Q 009604 216 ESTVIMASGMSASTVMLLAL----VP----------------------AGGHIVTTTDCYRKTRIFIETVLPKMGI---T 266 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al----l~----------------------pGD~VIv~~~~y~~t~~~~~~~l~~~Gi---~ 266 (531)
...+++++|++|+.+++.+. ++ ++.+|+++...|.+..... ...|+ +
T Consensus 160 ~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa----~~lglg~~~ 235 (522)
T TIGR03799 160 SLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAA----DVLGIGRDN 235 (522)
T ss_pred CCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHH----HHcCCCccc
Confidence 34678889999888877542 11 2357899999998865433 33344 4
Q ss_pred EEEeCC-----CCHHHHHHhccC---CCcEEEEEe--CCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccc---
Q 009604 267 ATVIDP-----ADMEGLEAALNN---NNVSLFFTE--SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA--- 333 (531)
Q Consensus 267 v~~vd~-----~d~e~Le~al~~---~~tklV~le--sP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~--- 333 (531)
++.++. .|+++|+++|++ .+++.+++. ..++.+|.+.|+++|+++|+++|++++||.+|+......+
T Consensus 236 v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r 315 (522)
T TIGR03799 236 LIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYR 315 (522)
T ss_pred EEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHH
Confidence 444442 388999988852 135555444 5567899999999999999999999999999986533221
Q ss_pred ---cc-cCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHH---Hhh-----------hcCCCch-HHHHHHHHHHH
Q 009604 334 ---LS-LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRN---LHH-----------VLGGALN-PNAAYLIIRGM 393 (531)
Q Consensus 334 ---l~-~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~---~~~-----------~~G~~~s-~~~a~l~l~~L 393 (531)
.. .++|.++.|.||++.++-+ .|+++.+ +++.+.+.. +.. .-|+... ....|..++.+
T Consensus 316 ~~l~gle~aDSit~d~HK~l~~P~g--~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~l 393 (522)
T TIGR03799 316 HLLKGIERADSVTIDAHKQLYVPMG--AGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHII 393 (522)
T ss_pred HHhcCchhCCEEEEChhhcCCcCcc--cEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHH
Confidence 12 2689999999997766643 4666654 455444332 110 0111111 22344444433
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHcCCCceEEe
Q 009604 394 --KTLHLRVQQQNSTALRMAKILEAHPKVKRVH 424 (531)
Q Consensus 394 --~tl~~r~~~~~~na~~La~~L~~~p~v~~V~ 424 (531)
+.+...+++..+.++++.+.|++.|.++.+.
T Consensus 394 G~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~ 426 (522)
T TIGR03799 394 GRKGYELLIDQSIEKAKYFADLIQQQPDFELVT 426 (522)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEec
Confidence 4456667777888999999999988876554
No 277
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.46 E-value=2.4e-11 Score=120.62 Aligned_cols=196 Identities=19% Similarity=0.238 Sum_probs=147.8
Q ss_pred EEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCCCcEEEEE
Q 009604 218 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFT 292 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~tklV~l 292 (531)
-++-++|+.+...++..++.|||.|++-...-.+-+ +...++++|++|..++.+ .++++++++.++++++|++
T Consensus 71 f~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~r--a~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv 148 (385)
T KOG2862|consen 71 FVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQR--AADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFV 148 (385)
T ss_pred EEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHH--HHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEE
Confidence 566788999999999999999999988655433322 225678999999988643 6899999999888999999
Q ss_pred eCCCCCCCcccC-HHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHH
Q 009604 293 ESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI 370 (531)
Q Consensus 293 esP~NPtG~v~d-l~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l 370 (531)
++-..-||...| ++.+.++||+|+++++||.+..-+ ..+...++|+|+......|.++++.+. +.+..++...+++
T Consensus 149 ~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GL--siisfS~ka~~~~ 226 (385)
T KOG2862|consen 149 THGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGL--SIISFSDKALEAI 226 (385)
T ss_pred EecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCc--ceeecCHHHHHHH
Confidence 999999999999 667778999999999999985432 345566899999999999999988653 5677777766666
Q ss_pred HHHh--------------hhcCC---------CchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 009604 371 RNLH--------------HVLGG---------ALNP-----NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 371 ~~~~--------------~~~G~---------~~s~-----~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~ 417 (531)
+.-. +.+|. +.+. ..+.+.+-.-+-|+.++++|.++++.+...|+++
T Consensus 227 ~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~ 301 (385)
T KOG2862|consen 227 RDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL 301 (385)
T ss_pred hhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5321 11221 1221 2233333444567788899999999999888876
No 278
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.46 E-value=2.7e-12 Score=135.04 Aligned_cols=226 Identities=20% Similarity=0.228 Sum_probs=134.1
Q ss_pred EEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHh-hccc-----CCcEEEE--eCC----CCHHHHHHhccCCC
Q 009604 219 VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPK-----MGITATV--IDP----ADMEGLEAALNNNN 286 (531)
Q Consensus 219 i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~-~l~~-----~Gi~v~~--vd~----~d~e~Le~al~~~~ 286 (531)
+=.-||+.|+..++.+|++|||+|+..+..+++-...-.. ..++ ...++.. +|. .|.+++++.+++.+
T Consensus 90 vqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~k 169 (399)
T PF00464_consen 90 VQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHK 169 (399)
T ss_dssp ---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH-
T ss_pred eecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcC
Confidence 3477999999999999999999999988877653210000 0000 0122222 231 38899999887667
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCC-----CCccccccccCCcEEEECCccccccCCCceEEEEE
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA-----TPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a-----~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv 361 (531)
+|+|++-.-+ .-...|++++.++|++.|++|++|.++- .+...+|++. +|++..|+||.|.|+. +|+|.
T Consensus 170 PklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt~sThKtl~GPr---ggiI~ 243 (399)
T PF00464_consen 170 PKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVTGSTHKTLRGPR---GGIIL 243 (399)
T ss_dssp -SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEEEESSGGG-SSS----EEEE
T ss_pred CCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEEEeeccccccccC---ceEEE
Confidence 8999985444 4567899999999999999999999964 3456789987 9999999999999986 89999
Q ss_pred eC--------------hHHHHHHHHHhh--hcCCC-chHHHHHH-HH-HHH-HHHHHHHHHHHHHHHHHHHHHHcCCCce
Q 009604 362 GS--------------GKLVTQIRNLHH--VLGGA-LNPNAAYL-II-RGM-KTLHLRVQQQNSTALRMAKILEAHPKVK 421 (531)
Q Consensus 362 ~~--------------~~li~~l~~~~~--~~G~~-~s~~~a~l-~l-~~L-~tl~~r~~~~~~na~~La~~L~~~p~v~ 421 (531)
.+ +++.+++..... ..|+. +....+.. ++ ..+ .......++..+|++.|++.|.+.. .
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G-~- 321 (399)
T PF00464_consen 244 TNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERG-F- 321 (399)
T ss_dssp ES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred EcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCC-c-
Confidence 98 677787775432 22222 22222211 11 111 1245667788899999999999863 2
Q ss_pred EEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC---CHHHHHHHHHHcC
Q 009604 422 RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTATIKFIDALK 467 (531)
Q Consensus 422 ~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g---~~~~~~~fl~~L~ 467 (531)
.|..-+- -..++.+++.. +-..++++++...
T Consensus 322 ~v~~ggT---------------d~H~vlvd~~~~~~~g~~a~~~Le~~g 355 (399)
T PF00464_consen 322 KVVTGGT---------------DNHQVLVDLRSFGIDGKEAEKALEEAG 355 (399)
T ss_dssp EEGGGS----------------SSSEEEEEGGGGTS-HHHHHHHHHHTT
T ss_pred EEEECCC---------------CCCeEEEEecccccchHHHHHHHHhcC
Confidence 2322221 13477888753 2245556666553
No 279
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.46 E-value=2.3e-11 Score=130.57 Aligned_cols=269 Identities=13% Similarity=0.143 Sum_probs=161.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHHHHhhccc------C-C--cEEEEeC--CCC-
Q 009604 215 AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLPK------M-G--ITATVID--PAD- 274 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~-------pG-D~VIv~~~~y~~t~~~~~~~l~~------~-G--i~v~~vd--~~d- 274 (531)
.+.+++++||++|+..+++.... +| .+||.....|++........... + + ..+.+++ ..|
T Consensus 102 ~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 181 (423)
T PRK05964 102 LDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGY 181 (423)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchh
Confidence 35789999999999999874321 23 57888888887743222111110 0 0 0122333 234
Q ss_pred ----HHHHHHhccC--CCcEEEEEeC-CCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCc------cccccccC
Q 009604 275 ----MEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL------NQKALSLG 337 (531)
Q Consensus 275 ----~e~Le~al~~--~~tklV~les-P~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~------~~~~l~~g 337 (531)
++++++.+++ +++.+|++|. +.+..|...+ +++|.++|++||+++|+||++.... ........
T Consensus 182 ~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~ 261 (423)
T PRK05964 182 EQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVS 261 (423)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCC
Confidence 7788888852 2478999988 5777776664 8899999999999999999974211 11222234
Q ss_pred CcEEEECCccccccCCCceEEEEEeChHHHHHHHHH----hhhcCCC--chHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q 009604 338 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLGGA--LNPNAAYLIIRGMKTLH--LRVQQQNSTALR 409 (531)
Q Consensus 338 aDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~----~~~~G~~--~s~~~a~l~l~~L~tl~--~r~~~~~~na~~ 409 (531)
.|+++ ++|.+++.. ...|++++++++.+.+... ....+.+ .++..+..++..++.+. ..+++..+..++
T Consensus 262 pDi~~--~~K~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~ 338 (423)
T PRK05964 262 PDIMC--LSKGLTGGY-LPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAG 338 (423)
T ss_pred CCeee--eehhhhcCc-ccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 67764 679997643 2356788898888877531 1122332 35666655555665443 234455555666
Q ss_pred HHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCH--HHHHHHHHHcCCCCcccccCCcccccccCcc
Q 009604 410 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDALKIPYIAPSFGGCESIVDQPAI 487 (531)
Q Consensus 410 La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~--~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~ 487 (531)
+.+.|++... +|.+ ...++.|.++.|++.+.. .....+.+.|...++-++ +
T Consensus 339 l~~~l~~l~~-----~~~i----------~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~----------~-- 391 (423)
T PRK05964 339 LAEGLEPFRD-----LPGV----------ADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLR----------P-- 391 (423)
T ss_pred HHHHHHhhcc-----CCCe----------EEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEE----------e--
Confidence 6666654311 2221 112456889999996532 135567776654442221 1
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 488 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 488 ~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
..+.|||+..+..+++.|+.+.++|+
T Consensus 392 ----------------~~~~lR~~p~l~~t~edId~~v~~l~ 417 (423)
T PRK05964 392 ----------------LGNTIYLMPPYIITAEELDRITDAIV 417 (423)
T ss_pred ----------------cCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 02479999887777666666666554
No 280
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.44 E-value=3e-12 Score=124.73 Aligned_cols=199 Identities=17% Similarity=0.246 Sum_probs=146.9
Q ss_pred EEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-------CHHHHHHhc----cC-
Q 009604 218 TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------DMEGLEAAL----NN- 284 (531)
Q Consensus 218 ~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-------d~e~Le~al----~~- 284 (531)
++=++.|. ++-+.++.+++++||.|+++...|..++. ..++.|..+..++.. +++...+.| ++
T Consensus 78 ~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyv----AAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~ 153 (382)
T COG1103 78 EVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYV----AAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEG 153 (382)
T ss_pred eeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHH----HHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhcc
Confidence 44456666 99999999999999999999999988873 345668888877643 455544444 22
Q ss_pred -CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEEEEe
Q 009604 285 -NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISG 362 (531)
Q Consensus 285 -~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~ 362 (531)
..+.+.++.+|....|.+.|.++++++|+++|+++++..+|..+ ++.+..+.|+|+++.|.||.++..+ ..|++..
T Consensus 154 g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~--PiGvl~~ 231 (382)
T COG1103 154 GDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASA--PIGVLAM 231 (382)
T ss_pred CCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEecCccchhccC--CeeEEee
Confidence 13789999999999999999999999999999999999999876 4566778899999999999998765 3699999
Q ss_pred ChHHHHHHHHHh---------hhcCCCchHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHcCCCceE
Q 009604 363 SGKLVTQIRNLH---------HVLGGALNPNAAYLIIRGMKTLHLRVQQQ---NSTALRMAKILEAHPKVKR 422 (531)
Q Consensus 363 ~~~li~~l~~~~---------~~~G~~~s~~~a~l~l~~L~tl~~r~~~~---~~na~~La~~L~~~p~v~~ 422 (531)
+.++.+.+.+.. ..+|.+.-......+...+....+|+++. .++++++.+.|++..++.+
T Consensus 232 ~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~q 303 (382)
T COG1103 232 SEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQ 303 (382)
T ss_pred hhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 998887664322 13454432222223334455555555543 4678888888887765543
No 281
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.44 E-value=2.5e-11 Score=131.44 Aligned_cols=272 Identities=14% Similarity=0.151 Sum_probs=160.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhc----cCC-CEEEEcCCCccchHHHHHhhcc---------cCCcEEEEeCCCCHHHHHH
Q 009604 215 AESTVIMASGMSASTVMLLALV----PAG-GHIVTTTDCYRKTRIFIETVLP---------KMGITATVIDPADMEGLEA 280 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all----~pG-D~VIv~~~~y~~t~~~~~~~l~---------~~Gi~v~~vd~~d~e~Le~ 280 (531)
.+.+++++||++|+..+++... +.| ..||.....|++.....-..-. ...-.+..++..|.+++++
T Consensus 141 ~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 220 (459)
T PRK11522 141 LKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRT 220 (459)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHH
Confidence 3578899999999999987432 122 3677777777774322111100 0011233456668888888
Q ss_pred hccC-----CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC------ccccccccCCcEEEECC
Q 009604 281 ALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSA 345 (531)
Q Consensus 281 al~~-----~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~------~~~~~l~~gaDivv~S~ 345 (531)
.++. .++.+|++|......|.+.+ ++++.++|++||+++|+||++... +.......-.|++ ++
T Consensus 221 ~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv--t~ 298 (459)
T PRK11522 221 ALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDIL--CL 298 (459)
T ss_pred HHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEE--Ee
Confidence 7752 24789999999988898887 999999999999999999997321 0112222346877 47
Q ss_pred ccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCc--hHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCce
Q 009604 346 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVK 421 (531)
Q Consensus 346 sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~--s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~p~v~ 421 (531)
.|.+++.- ...|++++++++.+.+......++.+. +|..+..++..|+.+.. .+++..+..+++.+.|++...
T Consensus 299 gK~lggG~-~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~-- 375 (459)
T PRK11522 299 AKALGGGV-MPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAR-- 375 (459)
T ss_pred chhhhCCC-ccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH--
Confidence 89998631 124666677777765532111234444 67766666666666532 233444444555555543210
Q ss_pred EEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhc
Q 009604 422 RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKY 501 (531)
Q Consensus 422 ~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~ 501 (531)
.+|.+ -...+|.|.++.+++... +....+.+.|...++-+...
T Consensus 376 --~~~~~---------i~~VrG~Gl~~giel~~~-~~~~~i~~~l~~~Gvl~~~~------------------------- 418 (459)
T PRK11522 376 --EYPDL---------VQEARGKGMLMAIEFVDN-EIGYNFASEMFRQRVLVAGT------------------------- 418 (459)
T ss_pred --hCCCc---------eeeEEeceeEEEEEecCc-hHHHHHHHHHHHCCeEEEec-------------------------
Confidence 12210 012246788999999643 34556666665444333211
Q ss_pred CCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009604 502 GIMDNLVRFSFGVEDFEDLKADVLQAL 528 (531)
Q Consensus 502 gi~~~lIRlSvGlE~~edli~dL~~AL 528 (531)
+...+.|||..-+-.+++.++.+.++|
T Consensus 419 ~~~~~~lr~~Ppl~~t~~~id~~l~~l 445 (459)
T PRK11522 419 LNNAKTIRIEPPLTLTIEQCEQVLKAA 445 (459)
T ss_pred CCCCCEEEEECCccCCHHHHHHHHHHH
Confidence 012467998887755555554444444
No 282
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.44 E-value=2.6e-11 Score=140.53 Aligned_cols=145 Identities=22% Similarity=0.303 Sum_probs=115.9
Q ss_pred CcEEEeCChHHHHHHHHHHh-ccC--CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEE
Q 009604 216 ESTVIMASGMSASTVMLLAL-VPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFT 292 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al-l~p--GD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~l 292 (531)
.++-++.+++++...+++++ .++ +|+|++++.+|+.+...++..++..|++++.++..+ ++. .+ ++.++++
T Consensus 139 anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d~~---~~-~~~~vlv 212 (954)
T PRK05367 139 ANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--ALD---HD-DVFGVLL 212 (954)
T ss_pred hhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--CCC---cc-cEEEEEE
Confidence 35677888888777777765 445 489999999999998888777888999999888643 111 23 4777877
Q ss_pred eCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCC-CCCccccccccCCcEEEECCccc-----cccCCCceEEEEEeChHH
Q 009604 293 ESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKF-----IGGHNDVLAGSISGSGKL 366 (531)
Q Consensus 293 esP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~-a~~~~~~~l~~gaDivv~S~sK~-----lgg~g~v~gG~iv~~~~l 366 (531)
..| |.+|.+.|+++|+++||++|+++++|... +..+...|-++|+|+++.|.+|| +||++ +|+++.++++
T Consensus 213 q~p-~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~---aGflavr~~~ 288 (954)
T PRK05367 213 QYP-GTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPH---AAYFAVRDAY 288 (954)
T ss_pred ecC-CCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCC---EEEEEECHHH
Confidence 777 47999999999999999999999999876 33445577889999999999999 77776 8999998877
Q ss_pred HHHH
Q 009604 367 VTQI 370 (531)
Q Consensus 367 i~~l 370 (531)
.+.+
T Consensus 289 ~r~l 292 (954)
T PRK05367 289 KRSM 292 (954)
T ss_pred HhhC
Confidence 6655
No 283
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.43 E-value=1.1e-11 Score=143.54 Aligned_cols=276 Identities=15% Similarity=0.149 Sum_probs=169.2
Q ss_pred CCCcEEEeCChH-HHHHHHHHHh----ccCCC----EEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHH
Q 009604 214 GAESTVIMASGM-SASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLE 279 (531)
Q Consensus 214 g~e~~i~~sSG~-~Ai~~al~al----l~pGD----~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le 279 (531)
|.+.+-+..+|+ .+..+.++++ .++|| +|++++..|++.... +...|++++.++.+ |+++|+
T Consensus 556 G~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s----a~~~G~~vv~v~~d~~G~iD~~~L~ 631 (954)
T PRK05367 556 GYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS----AVMAGMKVVVVACDENGNIDLDDLR 631 (954)
T ss_pred CCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH----HHHCCCEEEEECCCCCCCcCHHHHH
Confidence 666666666555 5554444333 35666 599999999886543 34568888887642 789999
Q ss_pred HhccCC--CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC--ccccccccCCcEEEECCccccccCC--
Q 009604 280 AALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVLHSATKFIGGHN-- 353 (531)
Q Consensus 280 ~al~~~--~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~--~~~~~l~~gaDivv~S~sK~lgg~g-- 353 (531)
++++++ ++.+|++.+|++..+...|+++|+++||++|+++++|.++... ....+..+|+|+++.|+||+|+.+-
T Consensus 632 ~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~ 711 (954)
T PRK05367 632 AKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGG 711 (954)
T ss_pred HHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCC
Confidence 999653 4788889898876333478999999999999999999998533 2235668899999999999975221
Q ss_pred -CceEEEEEeChHHHHHHHHHh----h---hcCCCc-hHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009604 354 -DVLAGSISGSGKLVTQIRNLH----H---VLGGAL-NPN---------AAYLIIRGMKTLHLRVQQQNSTALRMAKILE 415 (531)
Q Consensus 354 -~v~gG~iv~~~~li~~l~~~~----~---~~G~~~-s~~---------~a~l~l~~L~tl~~r~~~~~~na~~La~~L~ 415 (531)
+--.|++..++.+...+.... . ..|... +++ ..|+..-|.+.+....++...++.++++.|+
T Consensus 712 GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~ 791 (954)
T PRK05367 712 GGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLK 791 (954)
T ss_pred CCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111567776655443332111 0 011111 111 1223333455566666666788889999887
Q ss_pred cCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEE-EEcCC-HHHHHHHHHHcCCCCcccccCCcccccccCccccccCC
Q 009604 416 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF-EVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 493 (531)
Q Consensus 416 ~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf-~l~g~-~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~ 493 (531)
++.. +.|++-...-- ...++.+ .++.. ...++.+.++|...++-.. +++
T Consensus 792 ~~~~---~~~~~~~~~~~----------~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~------------t~~---- 842 (954)
T PRK05367 792 DHYP---VLYTGANGRVA----------HECILDLRPLKESTGITVDDIAKRLIDYGFHAP------------TMS---- 842 (954)
T ss_pred hhcC---ccccCCCCCcc----------cceEEEeecccccCCCCHHHHHHHHHHCCCeEe------------ecC----
Confidence 7532 23332110001 1245555 23311 1234566777754442111 111
Q ss_pred CHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 494 SQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 494 ~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
..+ ++.+||++...++.+.+++|.++|.+
T Consensus 843 -------~pv-~~~l~i~ptE~~s~~elDr~~~al~~ 871 (954)
T PRK05367 843 -------FPV-AGTLMVEPTESESKAELDRFCDAMIA 871 (954)
T ss_pred -------Ccc-CCEEEEEeeecCCHHHHHHHHHHHHH
Confidence 001 57899999988888888888888864
No 284
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.43 E-value=8.3e-12 Score=123.15 Aligned_cols=251 Identities=21% Similarity=0.304 Sum_probs=167.5
Q ss_pred CCCccCCCCCCCCC-------CCCcEEE---eCChHHHHHHHHHHhccCCCEEEEcCC-CccchHHHH------Hhhccc
Q 009604 200 ASFEYGRYGNPTTV-------GAESTVI---MASGMSASTVMLLALVPAGGHIVTTTD-CYRKTRIFI------ETVLPK 262 (531)
Q Consensus 200 ~~~~Y~R~gnPt~~-------g~e~~i~---~sSG~~Ai~~al~all~pGD~VIv~~~-~y~~t~~~~------~~~l~~ 262 (531)
.+|.|...|.-|.+ |+|.+++ +-||+.||..+|..+++|||+++.-.- -|......+ ...|+.
T Consensus 58 tGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~d 137 (416)
T COG4100 58 TGYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKD 137 (416)
T ss_pred CCCCccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHH
Confidence 46777777777766 7777764 779999999999999999999876432 233322221 122556
Q ss_pred CCcEEEEeCCC-----CHHHHHHhccCCCcEEEEEeCCC----CCCCcccCHHHHHHHHHhc--CCEEEEeCCCCCCcc-
Q 009604 263 MGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN- 330 (531)
Q Consensus 263 ~Gi~v~~vd~~-----d~e~Le~al~~~~tklV~lesP~----NPtG~v~dl~~I~~la~~~--gi~lIvD~a~a~~~~- 330 (531)
+|+.++.++.. |.+.++++++++ ||+|.+.-.. -|...+.+++++.++.++. ++++.|||+|+.++.
T Consensus 138 fgi~Y~~v~Lt~~gkiD~~~v~~~i~~~-tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~ 216 (416)
T COG4100 138 FGIKYKAVPLTADGKIDIQAVKTAISDR-TKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEE 216 (416)
T ss_pred hCcceeecccccCCcccHHHHHHhcCcc-ceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhc
Confidence 78888877743 889999999985 9999996443 4666677888888888874 699999999998865
Q ss_pred ccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh------hhcCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 009604 331 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH------HVLGGALNPNAAYLIIRGMKTLHLRVQQQN 404 (531)
Q Consensus 331 ~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~------~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~ 404 (531)
..|...|+|++..|+-|..||.-...||++.++.++++...... +..|.++.. ...+.+++--.+.-+.+..
T Consensus 217 ~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~e~Gat~~~--l~~myqGlFlAPhvv~qa~ 294 (416)
T COG4100 217 KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGREGGATLYS--LREMYQGLFLAPHVVSQAV 294 (416)
T ss_pred cCccccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCccccccccHHH--HHHHHhhhccchHHHHHHh
Confidence 56788999999999999998876667899999999988753211 122222221 1122233332333334444
Q ss_pred HHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC
Q 009604 405 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI 468 (531)
Q Consensus 405 ~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~ 468 (531)
+-+.-.+.+|++. .+|. .|.+.--+ .--+-++.+. +.++...|+++++.
T Consensus 295 Kga~fta~~le~l------g~~~---~P~~~~kR-----tDlIQavkf~-~~eKmIaFcqaiQ~ 343 (416)
T COG4100 295 KGAHFTARFLEKL------GFPV---NPKYDAKR-----TDLIQAVKFG-SKEKMIAFCQAIQA 343 (416)
T ss_pred hhhHHHHHHHHHc------CCCC---CCcccccc-----cchhhheecC-CHHHHHHHHHHHhh
Confidence 5556666677653 2332 22221111 1124466674 55788889888864
No 285
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.43 E-value=4e-11 Score=128.80 Aligned_cols=234 Identities=15% Similarity=0.198 Sum_probs=135.3
Q ss_pred CcEEEeCChHHHHHHHHHHh---ccCCCEEEEcCCCccchHHHHHhhcc-----cCC-------cEEEEeC--CC-----
Q 009604 216 ESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLP-----KMG-------ITATVID--PA----- 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al---l~pGD~VIv~~~~y~~t~~~~~~~l~-----~~G-------i~v~~vd--~~----- 273 (531)
+.+++++||++|+..+++.. .++ ..||...+.|++........-. ..| +....++ ..
T Consensus 103 ~~~~f~~sGsea~e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 181 (425)
T PRK08088 103 KKTLLVTTGSEAVENAVKIARAATKR-SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSED 181 (425)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhCC-CeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHH
Confidence 57899999999888887643 334 4566667888775433322110 001 1111111 11
Q ss_pred -CHHHHHHhcc----CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC-ccccc--c-ccCCcE
Q 009604 274 -DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LNQKA--L-SLGADL 340 (531)
Q Consensus 274 -d~e~Le~al~----~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~-~~~~~--l-~~gaDi 340 (531)
++++|+++++ .+++++|++|...+.-|.+.+ +++|.++|+++|+++|+||++... ..... . ..+.+.
T Consensus 182 ~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~p 261 (425)
T PRK08088 182 DAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAA 261 (425)
T ss_pred HHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCC
Confidence 1556888775 235889999988766566554 889999999999999999997642 11111 1 224444
Q ss_pred EEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH---
Q 009604 341 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILE--- 415 (531)
Q Consensus 341 vv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~--- 415 (531)
-+.|++|.+++ | ...|++++++++++.+...........++..+..+...++... ..+++..+..+++.+.|.
T Consensus 262 di~s~sK~l~~-G-~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~ 339 (425)
T PRK08088 262 DLTTFAKSIAG-G-FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIA 339 (425)
T ss_pred CEEEEeccccC-C-CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 46789999985 3 4578899999988877654333233345666555555555432 112222222333333332
Q ss_pred -cCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC-------CHHHHHHHHHHcCCCC
Q 009604 416 -AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DLTATIKFIDALKIPY 470 (531)
Q Consensus 416 -~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g-------~~~~~~~fl~~L~~~~ 470 (531)
++|.+..+ +|.|.++++++.. ......+|...+...+
T Consensus 340 ~~~~~~~~v------------------~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~G 384 (425)
T PRK08088 340 EKHPEIGDV------------------RGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKG 384 (425)
T ss_pred HhCCCeEEE------------------eccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCC
Confidence 23332222 2457889999832 1234566777665444
No 286
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.41 E-value=5.3e-11 Score=127.72 Aligned_cols=271 Identities=13% Similarity=0.145 Sum_probs=153.0
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc-----ccCCc-----EEEEeCC----------C
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PKMGI-----TATVIDP----------A 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l-----~~~Gi-----~v~~vd~----------~ 273 (531)
+.+++++||++|+..+++... ....+|+.....|++.....-..- .+.+. .+..++. .
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~ 181 (421)
T PRK09792 102 AKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQD 181 (421)
T ss_pred ceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHH
Confidence 568999999999999987442 123568887777777432111110 01110 1222222 1
Q ss_pred CHHHHHHhcc----CCCcEEEEEeCCCCCCCccc-C---HHHHHHHHHhcCCEEEEeCCCCCC-cc-----ccccccCCc
Q 009604 274 DMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP-LN-----QKALSLGAD 339 (531)
Q Consensus 274 d~e~Le~al~----~~~tklV~lesP~NPtG~v~-d---l~~I~~la~~~gi~lIvD~a~a~~-~~-----~~~l~~gaD 339 (531)
+++.+++.++ .+++++|++|...+++|... + +++|.++|++||+++|+||++... .. ........|
T Consensus 182 ~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD 261 (421)
T PRK09792 182 SLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD 261 (421)
T ss_pred HHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc
Confidence 3477888775 23589999999999999765 6 889999999999999999996532 11 111222367
Q ss_pred EEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcC
Q 009604 340 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 340 ivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~ 417 (531)
+ .+++|.+++. ...|++++++++++.+...........++..+..++..++.+.. .+++..+..+++.+.|++.
T Consensus 262 i--~t~gK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l 337 (421)
T PRK09792 262 L--MTMAKSLAGG--MPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDA 337 (421)
T ss_pred E--EEeehhhcCC--CceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 5 5689999854 35678888888887664322211122345555544444444422 1222223333333333321
Q ss_pred CCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCH------HHHHHHHHHcCCCCcccccCCcccccccCcccccc
Q 009604 418 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW 491 (531)
Q Consensus 418 p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~------~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~ 491 (531)
. -.+|.. .+.+|.|.++++++.++. ....++...+...++.+. +
T Consensus 338 ~----~~~p~v----------~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~----------~------ 387 (421)
T PRK09792 338 K----ESVPAI----------AAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLL----------T------ 387 (421)
T ss_pred H----HhCCCc----------ceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEe----------e------
Confidence 0 011210 123567899999996431 234556665544343221 0
Q ss_pred CCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 492 DLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 492 ~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
.|...+.|||...+.-+++.++.+.++|+
T Consensus 388 ---------~g~~~~~irl~P~l~i~~~ei~~~~~~l~ 416 (421)
T PRK09792 388 ---------CGAYGNVIRFLYPLTIPDAQFDAAMKILQ 416 (421)
T ss_pred ---------cCCCCCEEEEeCCCcCCHHHHHHHHHHHH
Confidence 01124789999887555555554444443
No 287
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.40 E-value=5.8e-13 Score=136.79 Aligned_cols=155 Identities=23% Similarity=0.353 Sum_probs=47.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCC---CccchHHHHHhhcccCCcEEEEeCC---CCHHHHHHhccCCCc
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTD---CYRKTRIFIETVLPKMGITATVIDP---ADMEGLEAALNNNNV 287 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~---~y~~t~~~~~~~l~~~Gi~v~~vd~---~d~e~Le~al~~~~t 287 (531)
|+|+++++++..+|+.+++.++. +|.+||++.- ++++.++.- .+++.-|..++.+-. ..+++++++|+++ |
T Consensus 61 gAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip-~vm~~sGa~lvEVGttN~t~~~Dye~AI~e~-T 137 (367)
T PF03841_consen 61 GAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIP-DVMRQSGARLVEVGTTNRTHLSDYEKAITEN-T 137 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccc-cccccccccccccccccccccc-ccccccccccccccccccccccccccccccc-c
Confidence 99999999999999999998876 4778888764 456655433 456667777766643 3578999999985 9
Q ss_pred EEEEEeCCCCCCCc----ccCHHHHHHHHHhcCCEEEEeCCCCC------------CccccccccCCcEEEECCcccccc
Q 009604 288 SLFFTESPTNPFLR----CVDVKLVSDLCHKKGAIVCIDGTFAT------------PLNQKALSLGADLVLHSATKFIGG 351 (531)
Q Consensus 288 klV~lesP~NPtG~----v~dl~~I~~la~~~gi~lIvD~a~a~------------~~~~~~l~~gaDivv~S~sK~lgg 351 (531)
.+|+--+++|.... .++++++++++|+||+++++|..-+. +-....+..|+|+|++|..|.+||
T Consensus 138 a~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGG 217 (367)
T PF03841_consen 138 AALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGG 217 (367)
T ss_dssp -----------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS
T ss_pred cccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCC
Confidence 99888888887432 45899999999999999999987421 222445678999999999999999
Q ss_pred CCCceEEEEEeChHHHHHHHHHh
Q 009604 352 HNDVLAGSISGSGKLVTQIRNLH 374 (531)
Q Consensus 352 ~g~v~gG~iv~~~~li~~l~~~~ 374 (531)
+. +|+++|+++++++++...
T Consensus 218 PQ---aGiI~Gkk~lI~~lk~~p 237 (367)
T PF03841_consen 218 PQ---AGIIVGKKELIEKLKKHP 237 (367)
T ss_dssp -S----EEEEEEHHHHHHHHHHH
T ss_pred CC---eEEEEeCHHHHHHHhhCC
Confidence 86 899999999999998643
No 288
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.40 E-value=3.4e-11 Score=129.38 Aligned_cols=236 Identities=17% Similarity=0.209 Sum_probs=146.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhh-------cc--c-CCc------EEEEeCCCCHH
Q 009604 215 AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV-------LP--K-MGI------TATVIDPADME 276 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~--pGD~VIv~~~~y~~t~~~~~~~-------l~--~-~Gi------~v~~vd~~d~e 276 (531)
.+.+++++||++|+..+++.... .+++||..++.|++........ .. . -+. ....++..|++
T Consensus 106 ~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 185 (426)
T PRK00062 106 IEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLE 185 (426)
T ss_pred CCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHH
Confidence 45789999999999999986533 3678999888888854222111 00 0 011 12234456889
Q ss_pred HHHHhccC--CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCc---c--ccccccCCcEEEECC
Q 009604 277 GLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL---N--QKALSLGADLVLHSA 345 (531)
Q Consensus 277 ~Le~al~~--~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~---~--~~~l~~gaDivv~S~ 345 (531)
++++.+.+ .++++|++|......|.+.+ +++|.++|++||+++|+||++...- . ........|+ .++
T Consensus 186 ~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi--~~~ 263 (426)
T PRK00062 186 AVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDL--TTL 263 (426)
T ss_pred HHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcch--Hhh
Confidence 99888852 25889999977777898888 8999999999999999999975221 1 1112222464 468
Q ss_pred ccccccCCCceEEEEEeChHHHHHHHHHhh-hc--CCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHc----
Q 009604 346 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VL--GGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA---- 416 (531)
Q Consensus 346 sK~lgg~g~v~gG~iv~~~~li~~l~~~~~-~~--G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~---- 416 (531)
+|.+++. ..+|++++++++++.+..... .. ....++..+..++..|+.+.. ..++..+...++.+.|++
T Consensus 264 gK~l~~G--~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 341 (426)
T PRK00062 264 GKIIGGG--LPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKK 341 (426)
T ss_pred hhHhhCC--CcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999843 235677888888887752211 11 123456666666666665543 344444555555555543
Q ss_pred CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC------------HHHHHHHHHHcCCCCcc
Q 009604 417 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFIDALKIPYIA 472 (531)
Q Consensus 417 ~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~------------~~~~~~fl~~L~~~~ia 472 (531)
++.+.. .++.|.|+.+++... ...+..+.+.|...++-
T Consensus 342 ~~~~~~------------------vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~ 391 (426)
T PRK00062 342 AGIPLT------------------VNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVY 391 (426)
T ss_pred cCCceE------------------EEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeE
Confidence 222211 134678999888531 12345677766554433
No 289
>PLN02880 tyrosine decarboxylase
Probab=99.40 E-value=4.4e-11 Score=130.46 Aligned_cols=215 Identities=14% Similarity=0.134 Sum_probs=140.8
Q ss_pred cEEEeCChHHHHHHHHHHhcc-----C-----CC-EEEEcCCCccchHHHHHhhcccCCc-----EEEEeCC-----CCH
Q 009604 217 STVIMASGMSASTVMLLALVP-----A-----GG-HIVTTTDCYRKTRIFIETVLPKMGI-----TATVIDP-----ADM 275 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~-----p-----GD-~VIv~~~~y~~t~~~~~~~l~~~Gi-----~v~~vd~-----~d~ 275 (531)
..+++++|++|+.+++.+... . .. .|++++..|.+.... +...|+ ....+|. .|+
T Consensus 148 gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Ka----a~~lGlg~~~v~~Vp~d~~~~~~md~ 223 (490)
T PLN02880 148 GGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKA----CQIAGIHPENCRLLKTDSSTNYALAP 223 (490)
T ss_pred ceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHH----HHHcCCCHHHEEEeecCCCcCCcCCH
Confidence 467888889998887754321 1 12 455677778775543 333444 2233331 488
Q ss_pred HHHHHhccCC-----CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc-----ccc--cCCcEEEE
Q 009604 276 EGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-----ALS--LGADLVLH 343 (531)
Q Consensus 276 e~Le~al~~~-----~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-----~l~--~gaDivv~ 343 (531)
++|+++|++. .+-+|+....+-.+|.+-|+++|+++|+++|++++||.+|+.+.... .+. .++|.++.
T Consensus 224 ~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~ 303 (490)
T PLN02880 224 ELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNM 303 (490)
T ss_pred HHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEE
Confidence 9999888532 24567777777889999999999999999999999999998753322 111 25899999
Q ss_pred CCccccccCCCceEEEEEeCh-H-HHHHHHH---Hhhh-----------------cCCCchHHHHHHHH--HHHHHHHHH
Q 009604 344 SATKFIGGHNDVLAGSISGSG-K-LVTQIRN---LHHV-----------------LGGALNPNAAYLII--RGMKTLHLR 399 (531)
Q Consensus 344 S~sK~lgg~g~v~gG~iv~~~-~-li~~l~~---~~~~-----------------~G~~~s~~~a~l~l--~~L~tl~~r 399 (531)
++||++..+-+ .|+++.++ . +.+.+.. +... .|........|+.+ .|.+.+..+
T Consensus 304 d~HKwl~~P~~--~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~ 381 (490)
T PLN02880 304 NAHKWFLTNFD--CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSY 381 (490)
T ss_pred CchhhcCCCcc--EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHH
Confidence 99999987754 56666553 2 2222211 0000 11122234455443 356778888
Q ss_pred HHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC
Q 009604 400 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 454 (531)
Q Consensus 400 ~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g 454 (531)
+++..+.++++++.|+++++++.+.-|. .+++.|.+++
T Consensus 382 i~~~~~lA~~~~~~l~~~~~~el~~~~~-----------------~~iv~Fr~~~ 419 (490)
T PLN02880 382 IRNHIKLAKEFEQLVAQDSRFEVVTPRI-----------------FSLVCFRLVP 419 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEecCCc-----------------eEEEEEEEeC
Confidence 8888899999999999888765443222 3688999864
No 290
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.40 E-value=1.8e-10 Score=124.38 Aligned_cols=265 Identities=15% Similarity=0.165 Sum_probs=152.8
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchH-HHHHh-hcc-----cCC--cEEEEeCC------------
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIET-VLP-----KMG--ITATVIDP------------ 272 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~-~~~~~-~l~-----~~G--i~v~~vd~------------ 272 (531)
+.+++++||++|+..+++... ....+|+.-...|++.. ..+.. ... .++ -.+.+++.
T Consensus 102 ~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (443)
T PRK08360 102 PKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEP 181 (443)
T ss_pred CEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCch
Confidence 468899999999999987432 22356777666676642 21110 000 011 01222221
Q ss_pred -----CCHHHHHHhcc----CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC-ccc-----cc
Q 009604 273 -----ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LNQ-----KA 333 (531)
Q Consensus 273 -----~d~e~Le~al~----~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~-~~~-----~~ 333 (531)
.+++.+++.+. ..++++|++|...||+|.+.+ +++|.++|++||+++|+||++... ... ..
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~ 261 (443)
T PRK08360 182 GSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEH 261 (443)
T ss_pred hhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhh
Confidence 12344556553 235999999987799998775 889999999999999999997532 111 11
Q ss_pred cccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Q 009604 334 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMA 411 (531)
Q Consensus 334 l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La 411 (531)
.....|++ +++|.+++ | ...|++++++++++.+...........++..+..++..++.+.. .+++..+..+++.
T Consensus 262 ~~~~pDii--tlsK~l~~-G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~ 337 (443)
T PRK08360 262 FGVEPDII--TLGKPLGG-G-LPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTK 337 (443)
T ss_pred cCCCCCEE--EecccccC-C-ceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 22335766 57999994 3 45788889988888775432222233455555555555655432 2333334444455
Q ss_pred HHHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcCCCCcccccCCccc
Q 009604 412 KILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPYIAPSFGGCES 480 (531)
Q Consensus 412 ~~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-------~~~~~~fl~~L~~~~iavS~Gg~~S 480 (531)
+.|++ ++.+. ..+|.|.|+.+++..+ ...+..+...+...++-+..
T Consensus 338 ~~L~~l~~~~~~v~------------------~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~----- 394 (443)
T PRK08360 338 KRLEEMKKKHELIG------------------DVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTF----- 394 (443)
T ss_pred HHHHHHHHhCCCee------------------eeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEee-----
Confidence 54543 22221 2245788999998432 12345566665443322210
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 481 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 481 li~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
...+.|||+..+-.+++.++.+.++|+
T Consensus 395 ----------------------~~~~~lr~~P~l~~t~~~id~~~~~l~ 421 (443)
T PRK08360 395 ----------------------FSGNVLRIQPPLTIEKEVLDEGLDILE 421 (443)
T ss_pred ----------------------cCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 013679998776655555555544443
No 291
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.40 E-value=2.7e-11 Score=129.05 Aligned_cols=208 Identities=19% Similarity=0.204 Sum_probs=137.9
Q ss_pred CCCccCCCCCCCCC----------CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 009604 200 ASFEYGRYGNPTTV----------GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 269 (531)
Q Consensus 200 ~~~~Y~R~gnPt~~----------g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~ 269 (531)
++-.|+ |.|+.. |.++++.++||+.|+.+++...++|||+| +...|..+... .....|.....
T Consensus 70 GDd~Ya--gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~a---hI~~~Ga~fvD 142 (460)
T PRK13237 70 GDEAYA--GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRY---HQELNGGIFVD 142 (460)
T ss_pred cchhhc--CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHH---HHHhCCcEEEe
Confidence 344565 778766 88999999999999998766678999965 55555544322 11222432221
Q ss_pred eC---------------CCCHHHHHHhccCC---CcEEEEEeCCCCCC-Cccc---CHHHHHHHHHhcCCEEEEeCCCCC
Q 009604 270 ID---------------PADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFAT 327 (531)
Q Consensus 270 vd---------------~~d~e~Le~al~~~---~tklV~lesP~NPt-G~v~---dl~~I~~la~~~gi~lIvD~a~a~ 327 (531)
++ ..|+++|+++|++. ++++|.++.++|.. |.++ ++++|.++|++||++||+|.+...
T Consensus 143 i~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~ 222 (460)
T PRK13237 143 IIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCV 222 (460)
T ss_pred eecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchh
Confidence 21 13899999999753 35678888899988 5665 689999999999999999999543
Q ss_pred C-----------cccccc-------ccCCcEEEECCccccccCCCceEEEEEeC-hHHHHHHHHHhhhc-C----CCchH
Q 009604 328 P-----------LNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL-G----GALNP 383 (531)
Q Consensus 328 ~-----------~~~~~l-------~~gaDivv~S~sK~lgg~g~v~gG~iv~~-~~li~~l~~~~~~~-G----~~~s~ 383 (531)
. +..+.+ ...+|++++|++|.++... ||+++.+ +++.++++.+...+ | +.++.
T Consensus 223 gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~---GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~g 299 (460)
T PRK13237 223 ENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI---GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAG 299 (460)
T ss_pred cChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC---ceEEEECCHHHHHHHHHhccccCCCcCCCChhh
Confidence 2 222222 1248999999999988753 7888775 57788887764332 2 12322
Q ss_pred HHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHcC
Q 009604 384 NAAYLIIRGMKT-LH-LRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 384 ~~a~l~l~~L~t-l~-~r~~~~~~na~~La~~L~~~ 417 (531)
-+...+..+|+. +. ..+++..+++++|++.|.+.
T Consensus 300 rd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 300 RDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred hHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 122222223332 22 44555667889999999875
No 292
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.39 E-value=8.5e-12 Score=139.40 Aligned_cols=160 Identities=18% Similarity=0.169 Sum_probs=119.5
Q ss_pred CCCcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----------C-----HHH
Q 009604 214 GAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----------D-----MEG 277 (531)
Q Consensus 214 g~e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----------d-----~e~ 277 (531)
|++++.++.+|+ .+|.+++++++++||.|++++++|.+.+.. .+-..|+..+++.+. + .+.
T Consensus 188 gAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hg---aLiLsGa~PVYl~P~~n~~Gi~g~I~~~~~~~~~ 264 (720)
T PRK13578 188 NADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG---ALIQAGATPVYLETARNPFGFIGGIDAHCFDEEY 264 (720)
T ss_pred CCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHH---HHHHcCCeEEEeeccccccCCcCCCChHHccHHH
Confidence 899999999998 889999999999999999999999997742 123346776666421 3 455
Q ss_pred HHHhccCC---------CcEEEEEeCCCCCCCcccCHHHHHHH-HHhcCCEEEEeCCCCCCccc---------cccccCC
Q 009604 278 LEAALNNN---------NVSLFFTESPTNPFLRCVDVKLVSDL-CHKKGAIVCIDGTFATPLNQ---------KALSLGA 338 (531)
Q Consensus 278 Le~al~~~---------~tklV~lesP~NPtG~v~dl~~I~~l-a~~~gi~lIvD~a~a~~~~~---------~~l~~ga 338 (531)
|+++|+++ +.+++++.+|+ ..|.+.|+++|+++ +|.++ +|++||+|+....+ ..+..|+
T Consensus 265 i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~Ga 342 (720)
T PRK13578 265 LREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNE 342 (720)
T ss_pred HHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCC
Confidence 88887653 15899998887 68999999999998 68888 99999998764322 2256799
Q ss_pred c----EEEECCccccccCCCceEEEEEeChHH---------HHHHHHHhhhcCCC
Q 009604 339 D----LVLHSATKFIGGHNDVLAGSISGSGKL---------VTQIRNLHHVLGGA 380 (531)
Q Consensus 339 D----ivv~S~sK~lgg~g~v~gG~iv~~~~l---------i~~l~~~~~~~G~~ 380 (531)
| +++.|.||.+++.. .+.++-.+... .++++.....+.++
T Consensus 343 D~p~i~v~QStHKtL~alT--QaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qST 395 (720)
T PRK13578 343 NDPGIFVTQSVHKQQAGFS--QTSQIHKKDNHIKGQARYCPHKRLNNAFMLHAST 395 (720)
T ss_pred CCCCeEEEEChhhcchhhh--hHhhhhcCCcccccccccCCHHHHHHHHHHHcCC
Confidence 9 99999999998765 34455443322 24566655555544
No 293
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.39 E-value=9.5e-11 Score=126.17 Aligned_cols=237 Identities=16% Similarity=0.124 Sum_probs=135.3
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchH-HHHHhhc-----c-cCC---cEEEEeCC-----------
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETVL-----P-KMG---ITATVIDP----------- 272 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~-~~~~~~l-----~-~~G---i~v~~vd~----------- 272 (531)
+.+++++||++|+..+++... ....+|+.....|++.. ..+.... . .++ -.+.+++.
T Consensus 104 ~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (433)
T PRK08117 104 DCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGED 183 (433)
T ss_pred CEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCc
Confidence 456777999999999987421 12356777776666633 2211000 0 000 01122221
Q ss_pred ------CCHHHHHHhcc----CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc-ccc---c
Q 009604 273 ------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-QKA---L 334 (531)
Q Consensus 273 ------~d~e~Le~al~----~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~-~~~---l 334 (531)
.+++++++.++ .+++.+|++|......|.+.+ +++|.++|++||+++|+||++..... ... .
T Consensus 184 ~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~ 263 (433)
T PRK08117 184 PEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQ 263 (433)
T ss_pred hhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHh
Confidence 14456666653 235899999999988899888 99999999999999999999763211 111 1
Q ss_pred ccC--CcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q 009604 335 SLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRM 410 (531)
Q Consensus 335 ~~g--aDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~L 410 (531)
..| .|+ .+++|.+++ | ...|++++++++++.+...........+|..+..++..|+.+.. .+++..+..+.+
T Consensus 264 ~~gv~pDi--~t~sK~lg~-G-~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l 339 (433)
T PRK08117 264 TFGVVPDI--MTIAKGIAS-G-LPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYA 339 (433)
T ss_pred hcCCCCCE--eehhhhccC-C-CcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 123 454 579999985 3 45678888888877664322111123356666666666665532 223333444445
Q ss_pred HHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-----HHHHHHHHHHcCCCC
Q 009604 411 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTATIKFIDALKIPY 470 (531)
Q Consensus 411 a~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-----~~~~~~fl~~L~~~~ 470 (531)
.+.|++... .+|.. ...+|.|.++.+++..+ ......+.+.+...+
T Consensus 340 ~~~L~~l~~----~~~~~----------~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~G 390 (433)
T PRK08117 340 LERLEVLKE----KHPVI----------GDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKG 390 (433)
T ss_pred HHHHHHHHh----cCCce----------eeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCC
Confidence 444443210 11110 12345778889988431 123455555554333
No 294
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.38 E-value=1.4e-10 Score=124.01 Aligned_cols=265 Identities=14% Similarity=0.090 Sum_probs=153.7
Q ss_pred cEEEe-CChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc------ccCCc---EEEEeCC--------CCHH
Q 009604 217 STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL------PKMGI---TATVIDP--------ADME 276 (531)
Q Consensus 217 ~~i~~-sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l------~~~Gi---~v~~vd~--------~d~e 276 (531)
.+.++ +||++|+..+++... ....+||.-...|++......... ..++. .+.+++. ++++
T Consensus 100 ~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 179 (412)
T TIGR02407 100 KVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIA 179 (412)
T ss_pred eEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHH
Confidence 35565 799999999987542 223578887777777542221110 11121 2233333 2467
Q ss_pred HHHHhccC-----CCcEEEEEeCCCCCCCccc-C---HHHHHHHHHhcCCEEEEeCCCCCC------ccccccccCCcEE
Q 009604 277 GLEAALNN-----NNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLGADLV 341 (531)
Q Consensus 277 ~Le~al~~-----~~tklV~lesP~NPtG~v~-d---l~~I~~la~~~gi~lIvD~a~a~~------~~~~~l~~gaDiv 341 (531)
.+++.+.+ .++.+|++|...++.|.+. + +++|.++|++||+++|+||++... +.........|++
T Consensus 180 ~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~ 259 (412)
T TIGR02407 180 YFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIV 259 (412)
T ss_pred HHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEE
Confidence 78887752 2478999999999988854 3 789999999999999999997521 1122234457877
Q ss_pred EECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHc
Q 009604 342 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKT-LHL--RVQQQNSTALRMAKILEA 416 (531)
Q Consensus 342 v~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~L~t-l~~--r~~~~~~na~~La~~L~~ 416 (531)
+ ++|.+++.| ...|++++++++ +.+... ..+.+ .++..+..++..++. +.. ..++..+..+++.+.|+.
T Consensus 260 ~--~~K~lg~~G-~pigav~~~~~~-~~~~~~--~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~ 333 (412)
T TIGR02407 260 C--LSKSISGYG-LPLALTLIKPEL-DVWKPG--EHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDR 333 (412)
T ss_pred E--echhccCCc-cceeEEEEchhh-hccCCC--ccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 6 669998745 456778887765 433211 12222 234444443444443 211 122222333444444432
Q ss_pred ----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccC
Q 009604 417 ----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 492 (531)
Q Consensus 417 ----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~ 492 (531)
++.+. . ..+|.|.+++++++.. .....+...+...++.+...
T Consensus 334 l~~~~~~~~-~----------------~vrg~Gl~~~l~l~~~-~~~~~~~~~~~~~Gv~v~~~---------------- 379 (412)
T TIGR02407 334 IVAEYPELI-K----------------QVRGRGLMQGIECGDG-DLAGKIAKAAFENGLIIETS---------------- 379 (412)
T ss_pred HHhhCCCce-E----------------eeecceeEEEEEecCh-HHHHHHHHHHHHCCCEEecc----------------
Confidence 22110 0 1245688999999643 44567777775545433211
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 493 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 493 ~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
+..++.|||+..+-.+++.++.+.++|++
T Consensus 380 ---------~~~~~~lr~~p~l~~t~~~i~~~~~~l~~ 408 (412)
T TIGR02407 380 ---------GPNDEVIKLLPPLTIDEETLQQGLDILEQ 408 (412)
T ss_pred ---------CCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 11246799999987777767666666653
No 295
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.38 E-value=1.9e-10 Score=124.23 Aligned_cols=265 Identities=14% Similarity=0.159 Sum_probs=154.1
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc-------ccCC---cEEEEeCCCC---------
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-------PKMG---ITATVIDPAD--------- 274 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l-------~~~G---i~v~~vd~~d--------- 274 (531)
+.+.+++||++|+..+++... ....+||.....|++.......+- ..++ ..+.+++..+
T Consensus 104 ~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (445)
T PRK08593 104 KRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEP 183 (445)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCC
Confidence 467888999999999987421 123467777777766432111110 0011 1122232111
Q ss_pred --------HHHHHHhcc----CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC-cc-----cc
Q 009604 275 --------MEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LN-----QK 332 (531)
Q Consensus 275 --------~e~Le~al~----~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~-~~-----~~ 332 (531)
++++++.+. .+++.+|++|.+.+..|.+.+ +++|.++|++||+++|+||++... -. ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~ 263 (445)
T PRK08593 184 DANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSIS 263 (445)
T ss_pred cHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHH
Confidence 134544442 235899999999988888766 899999999999999999997421 11 11
Q ss_pred ccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q 009604 333 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRM 410 (531)
Q Consensus 333 ~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~L 410 (531)
......|++ +++|.+++. ..+|++++++++++.+......+....+|..+..++..++.+.. .+++..+..+++
T Consensus 264 ~~gv~pDi~--t~gK~l~~G--~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l 339 (445)
T PRK08593 264 HFNITPDLM--SFGKSLAGG--MPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYA 339 (445)
T ss_pred hcCCCCCEe--eecccccCC--cccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 122336766 478999853 35788899998888775322223334556666665566655532 233444444555
Q ss_pred HHHHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcCCCCcccccCCcc
Q 009604 411 AKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPYIAPSFGGCE 479 (531)
Q Consensus 411 a~~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-------~~~~~~fl~~L~~~~iavS~Gg~~ 479 (531)
.+.|++ +|.|.. .+|.|.++.+++..+ ......+...+...++-+.
T Consensus 340 ~~~L~~l~~~~~~v~~------------------vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~----- 396 (445)
T PRK08593 340 RKRFDQWVSKYNFVGD------------------VRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVII----- 396 (445)
T ss_pred HHHHHHHHhcCCcEEE------------------EeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEe-----
Confidence 555543 332222 246778888888421 2234556666544332111
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 480 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 480 Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
+ ...+.|||+.-+-.+++.++.+.++|+
T Consensus 397 -----~-----------------~~~~~lr~~p~l~~t~~~id~~~~~l~ 424 (445)
T PRK08593 397 -----A-----------------VAGNVLRFQPPLVITYEQLDTALNTIE 424 (445)
T ss_pred -----c-----------------cCCCEEEEECCCccCHHHHHHHHHHHH
Confidence 0 013578998887666666665555554
No 296
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.38 E-value=3.2e-10 Score=121.67 Aligned_cols=236 Identities=14% Similarity=0.134 Sum_probs=136.1
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc-----ccCCc-----EEEEeCCC----------
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PKMGI-----TATVIDPA---------- 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l-----~~~Gi-----~v~~vd~~---------- 273 (531)
+.+++++||++|+..+++... ....+|+.-...|++........- ...+. .+..++..
T Consensus 95 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
T TIGR00700 95 KKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDK 174 (420)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccccc
Confidence 568999999999999987432 223567777777776432221110 01111 11222210
Q ss_pred ------CHHHHHHhcc----CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc------ccc
Q 009604 274 ------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN------QKA 333 (531)
Q Consensus 274 ------d~e~Le~al~----~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~------~~~ 333 (531)
+++.+++.+. .+++.+|++|.....+|.+.+ +++|.++|++||+++|+||++..... ...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~ 254 (420)
T TIGR00700 175 QLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEH 254 (420)
T ss_pred chhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhh
Confidence 2456666652 235899999999888888765 88999999999999999999753211 111
Q ss_pred cccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Q 009604 334 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMA 411 (531)
Q Consensus 334 l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La 411 (531)
...-.|+++ ++|.+++ | ...|++++++++++.+...........++..+..++..++.+.. ..++..+..+++.
T Consensus 255 ~~~~pDi~~--lsK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~ 330 (420)
T TIGR00700 255 EGPEPDLIT--TAKSLAD-G-LPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVT 330 (420)
T ss_pred cCCCCCEEE--eeccccC-C-cceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 223467655 8999984 4 45788889988887765322212223346665555545544321 1222223333344
Q ss_pred HHHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC------CHHHHHHHHHHcCCCCccc
Q 009604 412 KILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------DLTATIKFIDALKIPYIAP 473 (531)
Q Consensus 412 ~~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g------~~~~~~~fl~~L~~~~iav 473 (531)
+.|++ +|.+..+ ++.|.++.+++.. +.....++++.+...++.+
T Consensus 331 ~~L~~l~~~~~~~~~v------------------rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i 384 (420)
T TIGR00700 331 DRLTTLKAVDPRIGDV------------------RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLL 384 (420)
T ss_pred HHHHHHHhhCCCEEEe------------------eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEE
Confidence 44432 3322222 3457888898832 1233566766665545444
No 297
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.38 E-value=5.9e-11 Score=137.29 Aligned_cols=146 Identities=20% Similarity=0.277 Sum_probs=110.6
Q ss_pred CCcEEEeCChHHHHHHHHHHh-ccCC--CEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEE
Q 009604 215 AESTVIMASGMSASTVMLLAL-VPAG--GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~al-l~pG--D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~ 291 (531)
.+++-++.+++++..++++++ +++| |+|++++.+|+.+...++..++..|++++.++..+.+ ...+ .+..++
T Consensus 165 ~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~----~~~~-~v~~vl 239 (993)
T PLN02414 165 MSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD----YSSG-DVCGVL 239 (993)
T ss_pred hhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc----cccC-ceEEEE
Confidence 356788888888888777766 4544 7899999999999888888888899999988754322 2233 255666
Q ss_pred EeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC--ccccccccCCcEEEECCcccc-----ccCCCceEEEEEeCh
Q 009604 292 TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVLHSATKFI-----GGHNDVLAGSISGSG 364 (531)
Q Consensus 292 lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~--~~~~~l~~gaDivv~S~sK~l-----gg~g~v~gG~iv~~~ 364 (531)
+..|+ .+|.+.|+++|+++||++|+++++ .+.... ....+-++|+|+++.+.+||. ||+. .|+++.++
T Consensus 240 vq~P~-~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~---aGflavr~ 314 (993)
T PLN02414 240 VQYPA-TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPH---AAFLATSQ 314 (993)
T ss_pred EecCC-CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCC---eeEEEECH
Confidence 66665 589999999999999999999999 443322 122477899999999999998 4443 68999888
Q ss_pred HHHHHH
Q 009604 365 KLVTQI 370 (531)
Q Consensus 365 ~li~~l 370 (531)
++.+.+
T Consensus 315 ~~~r~~ 320 (993)
T PLN02414 315 EYKRLM 320 (993)
T ss_pred HHHhhC
Confidence 775533
No 298
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=1.8e-12 Score=134.06 Aligned_cols=196 Identities=21% Similarity=0.255 Sum_probs=155.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCC--------
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNN-------- 285 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~-------- 285 (531)
|.+++++|+.|.+++.+.+.+++.||.-|+.....|.+.. ..++.-|..++....+|+.+||+.|++.
T Consensus 196 g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~T 271 (519)
T KOG1357|consen 196 GVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLI----TGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKT 271 (519)
T ss_pred CCcceEEEeccccccccCcceeecCCcceeeccccchhee----ccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCc
Confidence 8899999999999999999999999999999988887743 4456678888888999999988887531
Q ss_pred ----CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc----------cccccCCcEEEECCcccccc
Q 009604 286 ----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----------KALSLGADLVLHSATKFIGG 351 (531)
Q Consensus 286 ----~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~----------~~l~~gaDivv~S~sK~lgg 351 (531)
+.-+|++|....+-|.+.++.++.++++++...|+.||++..+... .+....+||.+.+++|.++.
T Consensus 272 hrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga 351 (519)
T KOG1357|consen 272 HRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGA 351 (519)
T ss_pred CCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccc
Confidence 2347788999999999999999999999999999999997654321 11223478999999999987
Q ss_pred CCCceEEEEEeChHHHHHHHHHh--hhcCCCchHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHcC
Q 009604 352 HNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---------HLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 352 ~g~v~gG~iv~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~L~tl---------~~r~~~~~~na~~La~~L~~~ 417 (531)
. ||++.+++++++.++... ..++..++|..+...+.+++.+ .+++++..+|...+...|.+.
T Consensus 352 ~----GGyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 352 A----GGYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM 424 (519)
T ss_pred c----cceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC
Confidence 6 699999999999887532 3456777887777777777664 356677777777776666543
No 299
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.38 E-value=2.5e-10 Score=122.45 Aligned_cols=242 Identities=12% Similarity=0.119 Sum_probs=139.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcc-----c--CC---cEEEEeCCC---------
Q 009604 215 AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP-----K--MG---ITATVIDPA--------- 273 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l~-----~--~G---i~v~~vd~~--------- 273 (531)
.+.+++++||++|+..+++... ....+|+.....|++.....-.+-. + ++ -.+..++..
T Consensus 101 ~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 180 (421)
T PRK06777 101 PAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVE 180 (421)
T ss_pred CceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHH
Confidence 3578999999999999987432 2234688777777775422211100 0 00 011122211
Q ss_pred -CHHHHHHhcc----CCCcEEEEEeCCCCCCCcc-cC---HHHHHHHHHhcCCEEEEeCCCCCCc-c-----ccccccCC
Q 009604 274 -DMEGLEAALN----NNNVSLFFTESPTNPFLRC-VD---VKLVSDLCHKKGAIVCIDGTFATPL-N-----QKALSLGA 338 (531)
Q Consensus 274 -d~e~Le~al~----~~~tklV~lesP~NPtG~v-~d---l~~I~~la~~~gi~lIvD~a~a~~~-~-----~~~l~~ga 338 (531)
+++.+++.++ ..++.+|++|...+..|.. .+ +++|.++|++||+++|+||++.... . ......-.
T Consensus 181 ~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~p 260 (421)
T PRK06777 181 EALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKP 260 (421)
T ss_pred HHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCC
Confidence 2566777764 2348999999998888853 45 8899999999999999999975321 1 11112236
Q ss_pred cEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHc
Q 009604 339 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA 416 (531)
Q Consensus 339 Divv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~~ 416 (531)
|++ +++|.+++ | ...|++++++++++.+...........++..+..++..|+.+. ..+++..+..+.+.+.|++
T Consensus 261 Div--~~sK~l~~-G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~ 336 (421)
T PRK06777 261 DLI--TMAKSLGG-G-MPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEK 336 (421)
T ss_pred CEE--eeehhhcC-C-CceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 766 58999984 3 4578888888888776543221222335666666666665443 2234444555555565554
Q ss_pred CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC------HHHHHHHHHHcCCCCcccc
Q 009604 417 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATIKFIDALKIPYIAPS 474 (531)
Q Consensus 417 ~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~------~~~~~~fl~~L~~~~iavS 474 (531)
... .+|.. ...+|.|.++.+++... .+....+...+...++.+.
T Consensus 337 l~~----~~~~i----------~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~ 386 (421)
T PRK06777 337 AKA----SCPAI----------VDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLL 386 (421)
T ss_pred HHH----hCCCe----------EEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEe
Confidence 210 11111 11245788888877431 1234455555444444433
No 300
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.37 E-value=6e-11 Score=124.74 Aligned_cols=256 Identities=16% Similarity=0.109 Sum_probs=154.6
Q ss_pred CCcEEEeCChHHHHHHHHHHh-ccCC-CEEEEcCCCccchHHHHHhh---------cccCCcEEEEeCCCCHHHHHHhcc
Q 009604 215 AESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKTRIFIETV---------LPKMGITATVIDPADMEGLEAALN 283 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~al-l~pG-D~VIv~~~~y~~t~~~~~~~---------l~~~Gi~v~~vd~~d~e~Le~al~ 283 (531)
.+.+++++||++|+.++++.. ..+| ++||+....|++.....-.. +...-..+..++..|++++++.+.
T Consensus 81 ~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~ 160 (364)
T PRK04013 81 YEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAIT 160 (364)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHhc
Confidence 357899999999999999754 2345 88999888887753221110 111112344566678999999997
Q ss_pred CCCcEEEEEeCCCCCCCccc-C---HHHHHHHHHhcCCEEEEeCCCCCC-----ccccccccCCcEEEECCccccccCCC
Q 009604 284 NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHSATKFIGGHND 354 (531)
Q Consensus 284 ~~~tklV~lesP~NPtG~v~-d---l~~I~~la~~~gi~lIvD~a~a~~-----~~~~~l~~gaDivv~S~sK~lgg~g~ 354 (531)
+ ++++|++|......|... | +++|.++|++||+++|+||++... +.........|+++ +.|.+++.
T Consensus 161 ~-~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~--~gK~lggG-- 235 (364)
T PRK04013 161 K-ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVT--MGKGIGNG-- 235 (364)
T ss_pred C-CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEE--ecccccCC--
Confidence 6 499999998887666544 5 899999999999999999996522 11222334578877 58999874
Q ss_pred ceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchh
Q 009604 355 VLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEH 434 (531)
Q Consensus 355 v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~ 434 (531)
...++++.+.++.. .........+|..+..++..|+.+.. +...++++.+.+.|. .+.|
T Consensus 236 ~P~~a~~~~~~~~~----~~~~~T~~gnp~~~aaa~a~l~~i~~--~~l~~~~~~~l~~l~-~~~v-------------- 294 (364)
T PRK04013 236 VPVSLTLTNFDVER----GKHGSTFGGNPLACKAVAVTLRILRR--ERLVEKAGEKFIEIK-GERV-------------- 294 (364)
T ss_pred ceeEEEEecccccC----CCcCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHhc-cCcc--------------
Confidence 44566666655411 11111122356666666666666543 122333333311111 1111
Q ss_pred hhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009604 435 HIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 514 (531)
Q Consensus 435 ~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl 514 (531)
...+|.|.|+.+++... ..++.+.+...++-+... ..+.|||.--+
T Consensus 295 ----~~vRG~Gl~~gve~~~~---~~~i~~~~~~~Gll~~~~---------------------------g~~vlr~~Ppl 340 (364)
T PRK04013 295 ----VTTRGRGLMIGIVLKKP---VGKYVEELQNRGYLVHTA---------------------------GQRVIRLLPPL 340 (364)
T ss_pred ----eeeeeCcEEEEEEeCCc---HHHHHHHHHhCCcEEeeC---------------------------CCCEEEEeCCc
Confidence 23367889999999642 344555554333222110 12457776543
Q ss_pred ----CCHHHHHHHHHHHHHh
Q 009604 515 ----EDFEDLKADVLQALHA 530 (531)
Q Consensus 515 ----E~~edli~dL~~AL~~ 530 (531)
++.++.++.|+++|++
T Consensus 341 ~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 341 IISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred ccCHHHHHHHHHHHHHHHHH
Confidence 5566677777777654
No 301
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.37 E-value=6.4e-11 Score=124.03 Aligned_cols=199 Identities=21% Similarity=0.277 Sum_probs=135.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhc----------ccCCc------EEEEeCCCCH
Q 009604 214 GAESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL----------PKMGI------TATVIDPADM 275 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~al--l~pGD~VIv~~~~y~~t~~~~~~~l----------~~~Gi------~v~~vd~~d~ 275 (531)
..|.+-+++||++|...+++.. ....|+|+...-+|++....+---. ...|+ .+..++.+|+
T Consensus 108 ~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~ 187 (432)
T COG0001 108 SIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDL 187 (432)
T ss_pred cccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCH
Confidence 3488999999999999888632 1235889999999988765432111 11122 2344567899
Q ss_pred HHHHHhccCC--CcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC-----ccccccccCCcEEEEC
Q 009604 276 EGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHS 344 (531)
Q Consensus 276 e~Le~al~~~--~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~-----~~~~~l~~gaDivv~S 344 (531)
+++++++++. ++.+|++|..-.-.|.+.| +++|.++|+++|++||.||+...+ -.+.....-.|+.+
T Consensus 188 ~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDltt-- 265 (432)
T COG0001 188 EALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTT-- 265 (432)
T ss_pred HHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhh--
Confidence 9999999764 5899999988766677766 789999999999999999995321 12344444567766
Q ss_pred CccccccCCCceEEEEEeChHHHHHHHHHhhhc-CCCc--hHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHc
Q 009604 345 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL-GGAL--NPNAAYLIIRGMKTLHL---RVQQQNSTALRMAKILEA 416 (531)
Q Consensus 345 ~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~-G~~~--s~~~a~l~l~~L~tl~~---r~~~~~~na~~La~~L~~ 416 (531)
+-|.+||. ...|++.++.++++.+......+ ++++ +|.........++.+.. -.++..+...+|.+.|++
T Consensus 266 lGKiIGGG--lP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~ 341 (432)
T COG0001 266 LGKIIGGG--LPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRA 341 (432)
T ss_pred hhhhhcCC--cceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 88999965 45789999999999776543322 2333 34444443444444443 356666777777777765
No 302
>PLN02590 probable tyrosine decarboxylase
Probab=99.35 E-value=2.9e-10 Score=124.74 Aligned_cols=216 Identities=16% Similarity=0.158 Sum_probs=142.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcc-----------CCCEEEEcCCCccchHHHHHhhcccCCc---EEEE--eC-----CCC
Q 009604 216 ESTVIMASGMSASTVMLLALVP-----------AGGHIVTTTDCYRKTRIFIETVLPKMGI---TATV--ID-----PAD 274 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~-----------pGD~VIv~~~~y~~t~~~~~~~l~~~Gi---~v~~--vd-----~~d 274 (531)
...+++++|++|+.+++.+.-. +.-.|++++..|.+.... +...|+ .++. +| ..|
T Consensus 195 ~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KA----a~ilGlg~~~vr~Vp~d~~~~~~md 270 (539)
T PLN02590 195 GGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKA----CLIGGIHEENIRLLKTDSSTNYGMP 270 (539)
T ss_pred CceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHH----HHHcCCCcccEEEEeCCCCCCCcCC
Confidence 3578889999988887754311 111455567677765433 333343 2333 34 248
Q ss_pred HHHHHHhccCC-----CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccc----ccc---CCcEEE
Q 009604 275 MEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----LSL---GADLVL 342 (531)
Q Consensus 275 ~e~Le~al~~~-----~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~----l~~---gaDivv 342 (531)
+++|+++|.+. .+-+|+....+-.+|.+-|+++|.++|++||++++||.+|+......+ +.. .+|-+.
T Consensus 271 ~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit 350 (539)
T PLN02590 271 PESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFN 350 (539)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEE
Confidence 99999998542 245677777777899999999999999999999999999987543211 112 379999
Q ss_pred ECCccccccCCCceEEEEEeCh--HHHHHHHH---Hhh-----------------hcCCCchHHHHHHHHH--HHHHHHH
Q 009604 343 HSATKFIGGHNDVLAGSISGSG--KLVTQIRN---LHH-----------------VLGGALNPNAAYLIIR--GMKTLHL 398 (531)
Q Consensus 343 ~S~sK~lgg~g~v~gG~iv~~~--~li~~l~~---~~~-----------------~~G~~~s~~~a~l~l~--~L~tl~~ 398 (531)
.++||++.-+-+ .|++..++ .+.+.+.. +.. ..+-....+..|+.++ |.+.+..
T Consensus 351 ~D~HK~l~~p~~--cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~ 428 (539)
T PLN02590 351 MNAHKWLFANQT--CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRN 428 (539)
T ss_pred ECchhhcCcCcC--EEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999987654 46666553 22222211 110 1112223455666554 4577888
Q ss_pred HHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC
Q 009604 399 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 454 (531)
Q Consensus 399 r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g 454 (531)
++++..+.++++.+.|+++|.++-+.-|. -+++.|.+.+
T Consensus 429 ~i~~~~~lA~~~~~~l~~~~~fel~~~~~-----------------l~iVcFr~~~ 467 (539)
T PLN02590 429 FIRDHVNLAKHFEDYVAQDPSFEVVTTRY-----------------FSLVCFRLAP 467 (539)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecCCc-----------------eEEEEEEecC
Confidence 89999999999999999998876554333 2688898864
No 303
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.34 E-value=6.8e-11 Score=135.32 Aligned_cols=200 Identities=16% Similarity=0.145 Sum_probs=133.3
Q ss_pred CCC-cEEEeCChHHHHHHHHHHhcc--------CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHH
Q 009604 214 GAE-STVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLE 279 (531)
Q Consensus 214 g~e-~~i~~sSG~~Ai~~al~all~--------pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le 279 (531)
|-+ ..+..++|+.+..+.++++-. ..++|+++...|+..... +...|++++.++. .|+++|+
T Consensus 544 Gmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPas----a~~~G~~Vv~V~~d~~G~iDle~L~ 619 (939)
T TIGR00461 544 GFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPAS----AAMAGMQVVPVNCDQDGNIDLVDLK 619 (939)
T ss_pred CCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHH----HHHCCCEEEEeccCCCCCcCHHHHH
Confidence 544 445556666666555444321 235799999999776533 4455888888765 3899999
Q ss_pred HhccC--CCcEEEEEeCCCCCCCcccC-HHHHHHHHHhcCCEEEEeCCCCC-C-ccccccccCCcEEEECCcccccc-C-
Q 009604 280 AALNN--NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT-P-LNQKALSLGADLVLHSATKFIGG-H- 352 (531)
Q Consensus 280 ~al~~--~~tklV~lesP~NPtG~v~d-l~~I~~la~~~gi~lIvD~a~a~-~-~~~~~l~~gaDivv~S~sK~lgg-~- 352 (531)
+++++ .+|++|++.+|+| +|.+.| +++|+++||++|..+++|.++.. . ...+|.++|+|++++|.||+|++ +
T Consensus 620 ~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G 698 (939)
T TIGR00461 620 NKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHG 698 (939)
T ss_pred HHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCC
Confidence 99974 2599999999999 788877 99999999999999999999754 2 33566788999999999997662 2
Q ss_pred -CCceEEEEEeChHHHHHHHH--Hhh---------hcCCCc----h----HHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Q 009604 353 -NDVLAGSISGSGKLVTQIRN--LHH---------VLGGAL----N----PNAAY--LIIRGMKTLHLRVQQQNSTALRM 410 (531)
Q Consensus 353 -g~v~gG~iv~~~~li~~l~~--~~~---------~~G~~~----s----~~~a~--l~l~~L~tl~~r~~~~~~na~~L 410 (531)
|+--.|++..++++...+.. ... ..|... . ...+| +.+-|-+.+.+..+....|+.++
T Consensus 699 ~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl 778 (939)
T TIGR00461 699 GGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYM 778 (939)
T ss_pred CCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Confidence 11125888887665443321 000 011111 1 12233 33334445555556667889999
Q ss_pred HHHHHcCC
Q 009604 411 AKILEAHP 418 (531)
Q Consensus 411 a~~L~~~p 418 (531)
++.|+++.
T Consensus 779 ~~rL~~~~ 786 (939)
T TIGR00461 779 ATRLKDHY 786 (939)
T ss_pred HHHhhccC
Confidence 99998754
No 304
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=5.8e-10 Score=120.46 Aligned_cols=268 Identities=15% Similarity=0.128 Sum_probs=152.0
Q ss_pred CcEEEeCChHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhcc-----cCCc-----EEEEeC----CCC-----
Q 009604 216 ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP-----KMGI-----TATVID----PAD----- 274 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al--l~pGD~VIv~~~~y~~t~~~~~~~l~-----~~Gi-----~v~~vd----~~d----- 274 (531)
+.+++++||++|+..+++.. ....++||.....|++.....-.+-. ..+. .+..++ ..+
T Consensus 118 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (443)
T PRK06058 118 KRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLA 197 (443)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccc
Confidence 46899999999999998732 12347888888888775422211100 0010 111111 011
Q ss_pred ----------HHHHHHhccCCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc------cccc
Q 009604 275 ----------MEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN------QKAL 334 (531)
Q Consensus 275 ----------~e~Le~al~~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~------~~~l 334 (531)
.+.+++.+..+++.+|++|......|.+.+ +++|.++|++||+++|.||++..... ....
T Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~ 277 (443)
T PRK06058 198 TDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHE 277 (443)
T ss_pred cchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhc
Confidence 233444444335899999877655566554 89999999999999999999753211 1112
Q ss_pred ccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Q 009604 335 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAK 412 (531)
Q Consensus 335 ~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~ 412 (531)
..-.|+++. .|.+++. ...|++++++++++.+...........++..+..++..|+.+.. -.++..+....+.+
T Consensus 278 gv~PDiv~~--gK~l~~G--~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~ 353 (443)
T PRK06058 278 GIVPDLITT--AKGIAGG--LPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTD 353 (443)
T ss_pred CCCCCEEEE--cccccCC--CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 234688875 6999853 45778888888877765332211223456666666666665532 12233333444555
Q ss_pred HHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC------HHHHHHHHHHcCCCCcccccCCccccc
Q 009604 413 ILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATIKFIDALKIPYIAPSFGGCESIV 482 (531)
Q Consensus 413 ~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~------~~~~~~fl~~L~~~~iavS~Gg~~Sli 482 (531)
.|++ ++.+. +.+|.|.++.+++..+ .+...++++.+...++.+..++.
T Consensus 354 ~L~~l~~~~~~i~------------------~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~---- 411 (443)
T PRK06058 354 RLRALAAEDDRIG------------------DVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGT---- 411 (443)
T ss_pred HHHHHHhhCCcEE------------------eeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCC----
Confidence 5543 22221 2246788999988432 22355666666544443322111
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHHh
Q 009604 483 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALHA 530 (531)
Q Consensus 483 ~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE----~~edli~dL~~AL~~ 530 (531)
..+.|||..-+- +.++.++.|+++|++
T Consensus 412 ---------------------~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 412 ---------------------YGNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred ---------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 135788875554 445555566666554
No 305
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.32 E-value=5e-10 Score=120.98 Aligned_cols=238 Identities=11% Similarity=0.103 Sum_probs=136.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHH-H--------HhhcccCCcEEEEeCCC----
Q 009604 215 AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIF-I--------ETVLPKMGITATVIDPA---- 273 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~-------p-GD~VIv~~~~y~~t~~~-~--------~~~l~~~Gi~v~~vd~~---- 273 (531)
.+.+.+++||++|+..+++.... + ..+||.....|++.... + +..+......+..++..
T Consensus 109 ~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (445)
T PRK09221 109 LDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLP 188 (445)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCcccc
Confidence 35789999999999999874321 1 25788888888764211 1 01011011112222211
Q ss_pred --------------CHHHHHHhccC---CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----
Q 009604 274 --------------DMEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP---- 328 (531)
Q Consensus 274 --------------d~e~Le~al~~---~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~---- 328 (531)
..+++++.++. +++.+|++|......|.+.+ +++|.++|+++|+++|+||++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG 268 (445)
T PRK09221 189 ENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLG 268 (445)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCc
Confidence 13566776641 35889999999988899888 999999999999999999996421
Q ss_pred --ccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHH-------hhhcCCCchHHHHHHHHHHHHHHHH-
Q 009604 329 --LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGGALNPNAAYLIIRGMKTLHL- 398 (531)
Q Consensus 329 --~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~-------~~~~G~~~s~~~a~l~l~~L~tl~~- 398 (531)
+.......-.|+++ ++|.+++.. ...|++++++++++.+... ........+|..+..++..|+.+..
T Consensus 269 ~~~~~~~~gv~PDi~~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~ 345 (445)
T PRK09221 269 AAFAAERFGVTPDIIT--FAKGLTNGA-IPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE 345 (445)
T ss_pred hhhHHHhcCCCCCEEE--eccccccCc-ccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc
Confidence 11122222358765 789997542 2256677888887766421 1111122356666666666665532
Q ss_pred -HHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC----HHHHHHHHHHcCCCC
Q 009604 399 -RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDALKIPY 470 (531)
Q Consensus 399 -r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~----~~~~~~fl~~L~~~~ 470 (531)
.+++..+..+.+.+.|++..+ +|.+ ...+|.|.++.+++... ...+.++.+.+...+
T Consensus 346 ~l~~~~~~~g~~l~~~l~~l~~-----~~~v----------~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~G 407 (445)
T PRK09221 346 DLFERAAELAPYFEDAVHSLKG-----LPHV----------IDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKG 407 (445)
T ss_pred cHHHHHHHHHHHHHHHHHhhcc-----CCCE----------EEEecCceEEEEEEecccccccchHHHHHHHHHHCC
Confidence 234444555555555554311 1211 12356778888888531 122345555554333
No 306
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.32 E-value=2.8e-10 Score=122.18 Aligned_cols=274 Identities=12% Similarity=0.086 Sum_probs=152.8
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc-----cc--CC---cEEEEeCCC----------
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PK--MG---ITATVIDPA---------- 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l-----~~--~G---i~v~~vd~~---------- 273 (531)
+.+++++||++|+..+++... ....+|+.....|++.......+. .+ ++ ..+.+++..
T Consensus 102 ~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 181 (425)
T PRK07495 102 KKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQ 181 (425)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHH
Confidence 578999999999999987432 223578877777776432111110 00 11 122333322
Q ss_pred CHHHHHHhcc----CCCcEEEEEeCCCCCCCccc-C---HHHHHHHHHhcCCEEEEeCCCCCCcc-cc---ccccCCcEE
Q 009604 274 DMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATPLN-QK---ALSLGADLV 341 (531)
Q Consensus 274 d~e~Le~al~----~~~tklV~lesP~NPtG~v~-d---l~~I~~la~~~gi~lIvD~a~a~~~~-~~---~l~~gaDiv 341 (531)
+++++++.++ .+++++|++|.....+|... + +++|.++|++||+++|+||++..... .. ....|...-
T Consensus 182 ~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pD 261 (425)
T PRK07495 182 SLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAAD 261 (425)
T ss_pred HHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCC
Confidence 1455676653 23589999998876677543 3 78999999999999999999653211 11 111233223
Q ss_pred EECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCC
Q 009604 342 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPK 419 (531)
Q Consensus 342 v~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~~p~ 419 (531)
+.+++|.+++. ...|++++++++.+.+...........++..+..++..++.+.. ..++..+..+++.+.|++...
T Consensus 262 i~tlsK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~ 339 (425)
T PRK07495 262 LTTMAKGLAGG--FPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRE 339 (425)
T ss_pred EEeehhhhcCC--ccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh
Confidence 45689999853 45788888888877665322222223456666655555555532 223333444445554443210
Q ss_pred ceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC------HHHHHHHHHHcCCCCcccccCCcccccccCccccccCC
Q 009604 420 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 493 (531)
Q Consensus 420 v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~------~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~ 493 (531)
.+|.. ...+|.|.++++++... ......+.+.+...++-+...
T Consensus 340 ----~~~~i----------~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------------- 388 (425)
T PRK07495 340 ----TVPEI----------ADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC----------------- 388 (425)
T ss_pred ----hCCCe----------eeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec-----------------
Confidence 11211 11245678999998532 122345555554333222110
Q ss_pred CHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHHHHh
Q 009604 494 SQSERLKYGIMDNLVRFSF----GVEDFEDLKADVLQALHA 530 (531)
Q Consensus 494 ~~~~~~~~gi~~~lIRlSv----GlE~~edli~dL~~AL~~ 530 (531)
|...+.|||.- .-++.++.++.|+++|++
T Consensus 389 --------g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 389 --------GVHGNVIRFLAPITIQDDVFAEALDILEASILE 421 (425)
T ss_pred --------CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 11136788874 445667777777777764
No 307
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.32 E-value=1.3e-10 Score=125.38 Aligned_cols=214 Identities=19% Similarity=0.194 Sum_probs=144.6
Q ss_pred cEEEeCChHHHHHHHHHHhcc-----C---CC------EEEEcCCCccchHHHHHhhcccCCcEEEEeC--C----CCHH
Q 009604 217 STVIMASGMSASTVMLLALVP-----A---GG------HIVTTTDCYRKTRIFIETVLPKMGITATVID--P----ADME 276 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~all~-----p---GD------~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd--~----~d~e 276 (531)
...++++|++|+.+++++... . +. +|+++...|.+... .+..+|++.+.++ . .|++
T Consensus 121 ~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~K----aa~~lG~~~~~v~~~~~~~~id~~ 196 (460)
T COG0076 121 SGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEK----AARYLGLGLRRVPTVPTDYRIDVD 196 (460)
T ss_pred ceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHH----HHHHhCCCceeEEeccCccccCHH
Confidence 467888889999987765311 1 11 69999888887554 3444455544443 2 3899
Q ss_pred HHHHhccCCCcEE--EEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc--ccc-----cc-cCCcEEEECCc
Q 009604 277 GLEAALNNNNVSL--FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKA-----LS-LGADLVLHSAT 346 (531)
Q Consensus 277 ~Le~al~~~~tkl--V~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~--~~~-----l~-~gaDivv~S~s 346 (531)
+|+++|+++ +.. |+....+-++|.+-|+++|.++|++++++++||.+++..+. .++ .. -++|-++.++|
T Consensus 197 ~l~~~i~~~-t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~H 275 (460)
T COG0076 197 ALEEAIDEN-TIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGH 275 (460)
T ss_pred HHHHHHHhh-ccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcc
Confidence 999999986 555 77788889999999999999999999999999999886543 111 11 26899999999
Q ss_pred cccccCCCceEEEEEeC-hH-HHHHHHHHhhhcC-----------CCc--hHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Q 009604 347 KFIGGHNDVLAGSISGS-GK-LVTQIRNLHHVLG-----------GAL--NPNAAYLIIRGM--KTLHLRVQQQNSTALR 409 (531)
Q Consensus 347 K~lgg~g~v~gG~iv~~-~~-li~~l~~~~~~~G-----------~~~--s~~~a~l~l~~L--~tl~~r~~~~~~na~~ 409 (531)
|++..+-+ +|+++.+ ++ +.+.+.......+ ... ....+|..++.+ +-+...+++..+++++
T Consensus 276 K~g~aP~~--~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~ 353 (460)
T COG0076 276 KYGLAPIG--CGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARY 353 (460)
T ss_pred cccCCCCC--ceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHH
Confidence 99775543 4555554 43 3333331111111 111 223455544443 5566667778899999
Q ss_pred HHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC
Q 009604 410 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 454 (531)
Q Consensus 410 La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g 454 (531)
+++.|++.+..+-+.-|. .++++|..+.
T Consensus 354 la~~l~~~~~~e~~~~p~-----------------l~~V~fr~~~ 381 (460)
T COG0076 354 LAEELEKLGDFELVNEPE-----------------LPIVAFRLKD 381 (460)
T ss_pred HHHHHHhCCCcEeecCCc-----------------cceEEEEcCC
Confidence 999999886555555453 3689999854
No 308
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.32 E-value=4.2e-10 Score=120.92 Aligned_cols=234 Identities=15% Similarity=0.121 Sum_probs=131.5
Q ss_pred cEEEe-CChHHHHHHHHHHhc--cCCCEEEEcCCCccchHH-HHHh-----hcccCCc---EEEEeCC--------CCHH
Q 009604 217 STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRI-FIET-----VLPKMGI---TATVIDP--------ADME 276 (531)
Q Consensus 217 ~~i~~-sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~-~~~~-----~l~~~Gi---~v~~vd~--------~d~e 276 (531)
.+.++ +||++|+..+++... ....+||.....|++... .+.. .-..++. .+.+++. .|++
T Consensus 104 ~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 183 (425)
T PRK09264 104 KVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLA 183 (425)
T ss_pred eEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHH
Confidence 35554 699999999987432 223578877777776432 1211 0011111 2334443 3677
Q ss_pred HHHHhccC-----CCcEEEEEeCCCCCCCccc----CHHHHHHHHHhcCCEEEEeCCCCCC------ccccccccCCcEE
Q 009604 277 GLEAALNN-----NNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLGADLV 341 (531)
Q Consensus 277 ~Le~al~~-----~~tklV~lesP~NPtG~v~----dl~~I~~la~~~gi~lIvD~a~a~~------~~~~~l~~gaDiv 341 (531)
++++.+++ +++.+|++|......|.+. .+++|.++|++||+++|+||++... +.........|++
T Consensus 184 ~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~ 263 (425)
T PRK09264 184 YLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIV 263 (425)
T ss_pred HHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEE
Confidence 88888852 1478999999988777654 3899999999999999999997521 1122223456876
Q ss_pred EECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHHHHHHHHHHHHH-H--HHHHHHHHHHHHHHHHHHc
Q 009604 342 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTL-H--LRVQQQNSTALRMAKILEA 416 (531)
Q Consensus 342 v~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~L~tl-~--~r~~~~~~na~~La~~L~~ 416 (531)
+ ++|.+++.| ...|++++++++ ..+... ..+.+ .++..+..++..++.+ . ...++..++.+++.+.|++
T Consensus 264 t--~~K~l~~~G-~pigav~~~~~i-~~~~~~--~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~ 337 (425)
T PRK09264 264 T--LSKSISGYG-LPMALVLIKPEL-DVWKPG--EHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEE 337 (425)
T ss_pred E--eccccCCCc-cceEEEEEchhh-hccCCC--ccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 5 579998755 346777777765 332211 11212 2344443333444221 1 1233334445555555543
Q ss_pred CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCC
Q 009604 417 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 470 (531)
Q Consensus 417 ~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~ 470 (531)
... .+|.+ ....+|.|.+++++++. .+....|...+...+
T Consensus 338 l~~----~~~~~---------~~~vrg~Gl~~~i~l~~-~~~~~~l~~~~~~~G 377 (425)
T PRK09264 338 IAA----KYPGL---------GAEVRGRGMMQGIDFGD-GELAGKIAAEAFENG 377 (425)
T ss_pred HHH----hCCCc---------eecceecccEEEEEecC-hHHHHHHHHHHHHCC
Confidence 210 11111 01124567889999964 345566777665444
No 309
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.32 E-value=1e-09 Score=118.52 Aligned_cols=199 Identities=11% Similarity=0.121 Sum_probs=118.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHH-HH--------HhhcccCCcEEEEeCCC----
Q 009604 215 AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRI-FI--------ETVLPKMGITATVIDPA---- 273 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~-------p-GD~VIv~~~~y~~t~~-~~--------~~~l~~~Gi~v~~vd~~---- 273 (531)
.+.+.+++||++|+..+++.... + ..+||.....|++... .+ +.........+.+++..
T Consensus 106 ~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~ 185 (442)
T PRK13360 106 LNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLA 185 (442)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhh
Confidence 35789999999999999874321 2 2578888888777421 11 00001000112222211
Q ss_pred --------------CHHHHHHhcc---CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCC-CCc--
Q 009604 274 --------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA-TPL-- 329 (531)
Q Consensus 274 --------------d~e~Le~al~---~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a-~~~-- 329 (531)
.+++|++++. ..++.+|++|......|.+.+ +++|.++|++||+++|+||++. .+-
T Consensus 186 ~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG 265 (442)
T PRK13360 186 RNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLG 265 (442)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc
Confidence 1357777774 224889999999988899888 9999999999999999999973 211
Q ss_pred ---cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHH-------hhhcCCCchHHHHHHHHHHHHHHHH-
Q 009604 330 ---NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGGALNPNAAYLIIRGMKTLHL- 398 (531)
Q Consensus 330 ---~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~-------~~~~G~~~s~~~a~l~l~~L~tl~~- 398 (531)
.........|++ +++|.+++.. ...|.+++++++.+.+... ........+|..+..++..|+.+..
T Consensus 266 ~~~a~~~~gv~PDiv--t~gK~l~gG~-~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~ 342 (442)
T PRK13360 266 APFAAQYFGVTPDLL--TCAKGLTNGA-IPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE 342 (442)
T ss_pred cchhhhhcCCCCcee--eeeeccccCc-cceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 112223346776 4789998632 2245677788887765421 1111122356666666666665532
Q ss_pred -HHHHHHHHHHHHHHHHHc
Q 009604 399 -RVQQQNSTALRMAKILEA 416 (531)
Q Consensus 399 -r~~~~~~na~~La~~L~~ 416 (531)
.+++..+..+++.+.|++
T Consensus 343 ~l~~~~~~~g~~l~~~l~~ 361 (442)
T PRK13360 343 GLLTRAARLAPYWEDALHS 361 (442)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 223333444455555543
No 310
>PLN02263 serine decarboxylase
Probab=99.31 E-value=7.3e-10 Score=118.99 Aligned_cols=194 Identities=15% Similarity=0.141 Sum_probs=138.3
Q ss_pred EEEeCChHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC--cE
Q 009604 218 TVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN--VS 288 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~all~--pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~--tk 288 (531)
.+++++|++++..++.+.-. +...|+++...|.+.. +.+..+|++++.++. .|+++|+++|.+++ +-
T Consensus 155 G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~----KAa~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~ 230 (470)
T PLN02263 155 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDTLVSGEIDCADFKAKLLANKDKPA 230 (470)
T ss_pred EEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHH----HHHHhcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcE
Confidence 68889999999998876432 3447888888888755 444556777666653 38999999887542 45
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhcCC-----EEEEeCCCCCCcc---cc--cc--ccCCcEEEECCccccccCCCce
Q 009604 289 LFFTESPTNPFLRCVDVKLVSDLCHKKGA-----IVCIDGTFATPLN---QK--AL--SLGADLVLHSATKFIGGHNDVL 356 (531)
Q Consensus 289 lV~lesP~NPtG~v~dl~~I~~la~~~gi-----~lIvD~a~a~~~~---~~--~l--~~gaDivv~S~sK~lgg~g~v~ 356 (531)
+|+....+-++|.+-|+++|.++|+++|+ +++||.+|+..+. .. .+ ..++|-+..+.||+++.+-+
T Consensus 231 iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~-- 308 (470)
T PLN02263 231 IINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMP-- 308 (470)
T ss_pred EEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCccccCCCcC--
Confidence 67677888899999999999999999997 9999999875432 11 11 12489999999999987654
Q ss_pred EEEEEeChHHHHHHHH---Hh-----hhcCCCc--hHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcC
Q 009604 357 AGSISGSGKLVTQIRN---LH-----HVLGGAL--NPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 357 gG~iv~~~~li~~l~~---~~-----~~~G~~~--s~~~a~l~l~--~L~tl~~r~~~~~~na~~La~~L~~~ 417 (531)
.|+++.+++..+.+.. +. ...|+.. .+...|..++ |.+.+..++++..++++++.+.|++.
T Consensus 309 cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~ 381 (470)
T PLN02263 309 CGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA 381 (470)
T ss_pred EEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5777777655433321 11 1223322 2455666554 45678888899999999999999887
No 311
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.29 E-value=2e-10 Score=128.39 Aligned_cols=158 Identities=13% Similarity=0.202 Sum_probs=115.7
Q ss_pred CCCcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----------C-----HHH
Q 009604 214 GAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----------D-----MEG 277 (531)
Q Consensus 214 g~e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----------d-----~e~ 277 (531)
|++++.++.+|+ .+|.+++++++++||.|++++++|.+.+.. +...|+..+++.+. + .+.
T Consensus 209 gAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~ha----Lilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~ 284 (714)
T PRK15400 209 NADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHL----MMMSDVTPIYFRPTRNAYGILGGIPQSEFQHAT 284 (714)
T ss_pred CCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHH----HHHcCCeEEEecccccccCCccCCCccccCHHH
Confidence 899999999998 889999999999999999999999997753 34457777776432 3 788
Q ss_pred HHHhccCC-CcE---EEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc-------ccccccCC---c--EE
Q 009604 278 LEAALNNN-NVS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------QKALSLGA---D--LV 341 (531)
Q Consensus 278 Le~al~~~-~tk---lV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~-------~~~l~~ga---D--iv 341 (531)
++++|+++ +.+ .+++.+|+ ..|.+.|++.|+++|+.++ |++||+|+.... ..++..|+ | ++
T Consensus 285 i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~v 361 (714)
T PRK15400 285 IAKRVKETPNATWPVHAVITNST-YDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYE 361 (714)
T ss_pred HHHHHHhCccccCccEEEEECCC-CccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcCCCCCCceEE
Confidence 99888653 123 78888885 7899999999999999887 689999875432 23344566 5 99
Q ss_pred EECCccccccCCCceEEEEEeChHH-HHHHHHHhhhcCCC
Q 009604 342 LHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGGA 380 (531)
Q Consensus 342 v~S~sK~lgg~g~v~gG~iv~~~~l-i~~l~~~~~~~G~~ 380 (531)
++|.||.+++.. .+.++-.+..+ .++++.....+.++
T Consensus 362 tQStHKtL~alT--QaS~LHvkg~vd~~~~n~a~~m~~ST 399 (714)
T PRK15400 362 TQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTTT 399 (714)
T ss_pred EEchhhcccchh--HHhHHHHcCCCCHHHHHHHHHHHcCC
Confidence 999999998764 23333222221 24555554555443
No 312
>PRK06541 hypothetical protein; Provisional
Probab=99.29 E-value=1.1e-09 Score=118.88 Aligned_cols=220 Identities=13% Similarity=0.124 Sum_probs=133.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcc--------CCCEEEEcCCCccchHHHHHhhc------ccCC---cEEEEeCC------
Q 009604 216 ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVL------PKMG---ITATVIDP------ 272 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~--------pGD~VIv~~~~y~~t~~~~~~~l------~~~G---i~v~~vd~------ 272 (531)
+.+++++||++|+..+++.... ...+||.-...|++......... ..++ ..+..++.
T Consensus 113 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 192 (460)
T PRK06541 113 NRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRA 192 (460)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccc
Confidence 5789999999999998874321 13678887777776432111110 0000 01112211
Q ss_pred ----CC--------HHHHHHhcc---CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCC-CCcc--
Q 009604 273 ----AD--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA-TPLN-- 330 (531)
Q Consensus 273 ----~d--------~e~Le~al~---~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a-~~~~-- 330 (531)
++ ++.+++.++ +.++.+|++|...++.|.+.+ +++|.++|+++|+++|+||++. .+-.
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~ 272 (460)
T PRK06541 193 PELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGE 272 (460)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch
Confidence 11 256777774 234789999988999999888 9999999999999999999973 2111
Q ss_pred ---ccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhh--hcC--CCchHHHHHHHHHHHHHHHH--HHH
Q 009604 331 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLG--GALNPNAAYLIIRGMKTLHL--RVQ 401 (531)
Q Consensus 331 ---~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~--~~G--~~~s~~~a~l~l~~L~tl~~--r~~ 401 (531)
......-.|+++ ++|.+++. -...|++++++++++.+..... ..+ ...+|..+..++..++.+.. ..+
T Consensus 273 ~~a~~~~gv~PDivt--~gK~l~~G-~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~ 349 (460)
T PRK06541 273 MFGCERFGYVPDIIT--CAKGITSG-YSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLD 349 (460)
T ss_pred hhhhhhcCCCCCEEE--ecccccCC-ccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 111223468775 89999843 2235777788888776643211 112 23356666666666666532 234
Q ss_pred HHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 402 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 402 ~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
+..+..+++.+.|++... +|.. .+.+|.|.++.+++.
T Consensus 350 ~~~~~g~~l~~~L~~l~~-----~~~v----------~~vrg~Gl~~~ie~~ 386 (460)
T PRK06541 350 HVRDNEPAFRATLEKLLD-----LPIV----------GDVRGDGYFYGIELV 386 (460)
T ss_pred HHHHHHHHHHHHHHHhhc-----CCCe----------EEEEecceEEEEEEe
Confidence 455556666666654311 1110 123467889999984
No 313
>PRK05965 hypothetical protein; Provisional
Probab=99.28 E-value=9e-10 Score=119.45 Aligned_cols=221 Identities=17% Similarity=0.165 Sum_probs=130.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhh------cccCCc---EEEEeCC-----
Q 009604 215 AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETV------LPKMGI---TATVIDP----- 272 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~-------p-GD~VIv~~~~y~~t~~~~~~~------l~~~Gi---~v~~vd~----- 272 (531)
.+.+++++||++|+..+++.... + ..+||.....|++........ -..++. .+..++.
T Consensus 107 ~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (459)
T PRK05965 107 LNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYR 186 (459)
T ss_pred cCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccc
Confidence 35688889999999999874321 2 256888888887753211011 001111 0112211
Q ss_pred ----CC--------HHHHHHhccC---CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC-----
Q 009604 273 ----AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----- 328 (531)
Q Consensus 273 ----~d--------~e~Le~al~~---~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~----- 328 (531)
.| ++++++.+.. +++.+|++|......|.+.+ +++|.++|++||+++|.||++...
T Consensus 187 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~ 266 (459)
T PRK05965 187 NPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP 266 (459)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCch
Confidence 22 2567777742 25899999998877777654 789999999999999999996422
Q ss_pred -ccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh-----hhcCC--CchHHHHHHHHHHHHHHHHH-
Q 009604 329 -LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGG--ALNPNAAYLIIRGMKTLHLR- 399 (531)
Q Consensus 329 -~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~-----~~~G~--~~s~~~a~l~l~~L~tl~~r- 399 (531)
+.......-.||++ +.|.++|. -...|++++++++.+.+.... ...+. .-+|..+..++..|+.+...
T Consensus 267 ~~a~~~~gv~PDiv~--~gKgl~gG-~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~ 343 (459)
T PRK05965 267 LFACEAEGVVPDLMT--VAKGLTSG-YVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGG 343 (459)
T ss_pred hhhHhhcCCCCCeEE--echhhccC-CcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 11222334478888 67999864 224677778888887664210 11222 23566666666666655321
Q ss_pred -HHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 400 -VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 400 -~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
+++..+...++.+.|++. . .+|.. ...+|.|.++.|++.
T Consensus 344 l~~~~~~~g~~l~~~l~~l---~--~~~~v----------~~vrG~Gl~~gie~~ 383 (459)
T PRK05965 344 LLANGQKAGPRFAAGLDAL---R--AHPLV----------GDVRGRGLLGALELV 383 (459)
T ss_pred HHHHHHHHHHHHHHHHHhh---c--cCCCE----------EEEeecceEEEEEEe
Confidence 222333333444444331 0 12211 223678899999985
No 314
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.28 E-value=1.3e-09 Score=117.12 Aligned_cols=198 Identities=21% Similarity=0.288 Sum_probs=126.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc--c--------cCCc------EEEEeCCCCHH
Q 009604 215 AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL--P--------KMGI------TATVIDPADME 276 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l--~--------~~Gi------~v~~vd~~d~e 276 (531)
.+.+.+++||++|+..+++... ....+||.-...|++........- . ..++ .+..++..|++
T Consensus 109 ~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 188 (428)
T PRK12389 109 LEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIE 188 (428)
T ss_pred CcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHH
Confidence 3568999999999999987432 223578877777777432211110 0 0111 23445666899
Q ss_pred HHHHhccC--CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC---cc--ccccccCCcEEEECC
Q 009604 277 GLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP---LN--QKALSLGADLVLHSA 345 (531)
Q Consensus 277 ~Le~al~~--~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~---~~--~~~l~~gaDivv~S~ 345 (531)
++++.+++ +++.+|++|...+..|.+.+ +++|.++|+++|+++|+||++... .. ......-.|+++ +
T Consensus 189 ~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt--~ 266 (428)
T PRK12389 189 ALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLTA--L 266 (428)
T ss_pred HHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCeee--e
Confidence 99888852 24889999999888898887 999999999999999999996532 11 112233468764 7
Q ss_pred ccccccCCCceEEEEEeChHHHHHHHHHh-hhcCC--CchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHc
Q 009604 346 TKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGG--ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA 416 (531)
Q Consensus 346 sK~lgg~g~v~gG~iv~~~~li~~l~~~~-~~~G~--~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~ 416 (531)
.|.+++. ...|++++++++++.+.... ...+. ..+|..+..++..|+.+.. .+++..+..+++.+.|++
T Consensus 267 gK~lggG--~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~ 340 (428)
T PRK12389 267 GKIIGGG--LPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILE 340 (428)
T ss_pred chhhcCC--CceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 8999864 34566788888888764211 11222 3456666666666666532 234444455555555543
No 315
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.28 E-value=9.5e-11 Score=121.48 Aligned_cols=177 Identities=23% Similarity=0.323 Sum_probs=126.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCC-Cc-cchHHHHHhhcccCCcEEEEeCC---CCHHHHHHhccCCCcE
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTD-CY-RKTRIFIETVLPKMGITATVIDP---ADMEGLEAALNNNNVS 288 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~-~y-~~t~~~~~~~l~~~Gi~v~~vd~---~d~e~Le~al~~~~tk 288 (531)
+++++.++++-++|+.+++.++.. +.+||++.- .- ++... +...++..|.++..+.. ....+++.+|.++ |+
T Consensus 82 ~aea~~ivnnn~aAVll~~~al~~-~~EvVis~g~lV~gg~~~-v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~-ta 158 (395)
T COG1921 82 GAEAAAIVNNNAAAVLLTLNALAE-GKEVVVSRGELVEGGAFR-VPDIIRLAGAKLVEVGTTNRTHLKDYELAINEN-TA 158 (395)
T ss_pred chhheeeECCcHHHHHHHHhhhcc-CCeEEEEccccccCCCCC-hhHHHHHcCCEEEEecccCcCCHHHHHHHhccC-Ce
Confidence 678999999999999999988877 455555432 11 11111 23455666888877753 3688999999986 77
Q ss_pred EEEEeCCCCC-CCcccCHHHHHHHHHhcCCEEEEeCCCCCC-----ccccccccCCcEEEECCccccccCCCceEEEEEe
Q 009604 289 LFFTESPTNP-FLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISG 362 (531)
Q Consensus 289 lV~lesP~NP-tG~v~dl~~I~~la~~~gi~lIvD~a~a~~-----~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~ 362 (531)
+++=-+-+|. .-...++++++++||++|+++++|.+-+.. -.+..+..|+|+|++|..|.++|+. +|+++|
T Consensus 159 ~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq---aGii~G 235 (395)
T COG1921 159 LLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ---AGIIVG 235 (395)
T ss_pred eEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCc---cceEec
Confidence 6665444443 223457889999999999999999997553 2345577899999999999999986 899999
Q ss_pred ChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHH
Q 009604 363 SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL 396 (531)
Q Consensus 363 ~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl 396 (531)
+++++++++......+...+......+.+.|+.+
T Consensus 236 kKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~y 269 (395)
T COG1921 236 KKELIEKLQSHPLKRALRVDKETLAALEAALELY 269 (395)
T ss_pred hHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHHH
Confidence 9999999887554455555544444444455443
No 316
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.27 E-value=1.6e-09 Score=115.43 Aligned_cols=270 Identities=16% Similarity=0.139 Sum_probs=158.0
Q ss_pred CCcEEEeCChHHHHHHHHHHh-c-cCCCEEEEcCCCccc-hHHHHHhh---cc------cCCcEEEEeCCC---------
Q 009604 215 AESTVIMASGMSASTVMLLAL-V-PAGGHIVTTTDCYRK-TRIFIETV---LP------KMGITATVIDPA--------- 273 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~al-l-~pGD~VIv~~~~y~~-t~~~~~~~---l~------~~Gi~v~~vd~~--------- 273 (531)
.+.+++++||++|+..+++.. . ..+..||.....|++ |...+... .. .+.-.+..++..
T Consensus 117 ~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~ 196 (447)
T COG0160 117 LKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGI 196 (447)
T ss_pred CCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccC
Confidence 456999999999999998743 1 223456666666655 43333211 11 111123333311
Q ss_pred --------CHHHHHHhccC-----CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCC----Ccc--
Q 009604 274 --------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PLN-- 330 (531)
Q Consensus 274 --------d~e~Le~al~~-----~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~----~~~-- 330 (531)
..+.++..+.. .++.+|++|......|.+.+ ++++.++|++||+++|+||++.. +-.
T Consensus 197 ~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa 276 (447)
T COG0160 197 GGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFA 276 (447)
T ss_pred chhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchh
Confidence 12335554421 24889999999999998876 78999999999999999999753 211
Q ss_pred ccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 009604 331 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALR- 409 (531)
Q Consensus 331 ~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~- 409 (531)
......-.||++ ++|.+++ | ...|.+++++++.+ ...........-+|..+..++..|+.++.. ...+++..
T Consensus 277 ~E~~gv~PDivt--~aK~ig~-G-~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e--~L~~~a~~~ 349 (447)
T COG0160 277 FEHFGVEPDIVT--LAKSLGG-G-LPLSAVVGRAEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEEE--NLLERAAEL 349 (447)
T ss_pred hhhcCCCCCEEE--ecccccC-C-CceeEEeccHHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHHc--cHHHHHHHH
Confidence 222233478887 7899997 3 45788888888876 322111111223566666655566654431 33344443
Q ss_pred ---HHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC-------CHHHHHHHHHHcCCCCcccccCCcc
Q 009604 410 ---MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DLTATIKFIDALKIPYIAPSFGGCE 479 (531)
Q Consensus 410 ---La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g-------~~~~~~~fl~~L~~~~iavS~Gg~~ 479 (531)
|.+.|.+.. -.||.. .+.+|.|-|+.+++.. +.+.+.++++.+...++-+..
T Consensus 350 G~~l~~~L~~l~----~~~~~I----------gdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~---- 411 (447)
T COG0160 350 GEYLRDRLEELQ----EKHPLI----------GDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLT---- 411 (447)
T ss_pred HHHHHHHHHHHH----hhcCce----------ecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEec----
Confidence 333343211 012211 1236788899999862 235667777777554421111
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHh
Q 009604 480 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 530 (531)
Q Consensus 480 Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl----E~~edli~dL~~AL~~ 530 (531)
.|...+.|||..=+ |+.+..++.|+++|+.
T Consensus 412 ---------------------~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 412 ---------------------CGPHGNVLRILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred ---------------------cCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 13346788887554 5666777777777764
No 317
>PRK12403 putative aminotransferase; Provisional
Probab=99.27 E-value=1e-09 Score=119.01 Aligned_cols=217 Identities=18% Similarity=0.229 Sum_probs=128.1
Q ss_pred CcEEEeCChHHHHHHHHHHhc-------cCCCEE-EEcCCCccch-HHHHHhh-c---ccCC---cEEEEeCCC------
Q 009604 216 ESTVIMASGMSASTVMLLALV-------PAGGHI-VTTTDCYRKT-RIFIETV-L---PKMG---ITATVIDPA------ 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all-------~pGD~V-Iv~~~~y~~t-~~~~~~~-l---~~~G---i~v~~vd~~------ 273 (531)
+.+++++||++|+..+++... ++++.+ +.-...|++. ...+... . ...+ -.+..++..
T Consensus 116 ~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~ 195 (460)
T PRK12403 116 SHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANG 195 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccc
Confidence 679999999999999997653 233444 4445555553 3222100 0 0000 012222210
Q ss_pred -C----------HHHHHHhcc---CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC------c
Q 009604 274 -D----------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------L 329 (531)
Q Consensus 274 -d----------~e~Le~al~---~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~------~ 329 (531)
+ .+++++.+. .+++.+|++|......|.+.+ +++|.++|++||+++|+||++... +
T Consensus 196 ~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~ 275 (460)
T PRK12403 196 GELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF 275 (460)
T ss_pred cCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh
Confidence 1 245655552 124889999999888888877 999999999999999999997421 1
Q ss_pred cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhh--hcCCC--chHHHHHHHHHHHHHHHHH--HHHH
Q 009604 330 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGA--LNPNAAYLIIRGMKTLHLR--VQQQ 403 (531)
Q Consensus 330 ~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~--~~G~~--~s~~~a~l~l~~L~tl~~r--~~~~ 403 (531)
.......-.|+++ +.|.+++.- ...|++++++++.+.+..... .++.+ .+|..+..++..|+.+... +++.
T Consensus 276 a~e~~gv~PDiv~--~gK~lggG~-~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~ 352 (460)
T PRK12403 276 AHEHFGFEPDTLS--IAKGLTSGY-VPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRV 352 (460)
T ss_pred hhhhcCCCCCeEE--Ecccccccc-cceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHH
Confidence 1122233468887 789998642 124555678887776642111 12333 5677777766677666431 3333
Q ss_pred H-HHHHHHHHHHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 404 N-STALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 404 ~-~na~~La~~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
. +..+++.+.|++ ++.+. +.+|.|.++.+++.
T Consensus 353 ~~~~g~~l~~~L~~l~~~~~~i~------------------~vrG~Gl~~gie~~ 389 (460)
T PRK12403 353 KDDTGPYLQRCLREVFGDHPLVG------------------EVQGAGLVAALQFA 389 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEE------------------eEeecceEEEEEEc
Confidence 2 444555555543 22222 23567889999985
No 318
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.27 E-value=1.9e-09 Score=118.13 Aligned_cols=221 Identities=14% Similarity=0.151 Sum_probs=131.2
Q ss_pred CcEEEeCChHHHHHHHHHHhc-------cCC-CEEEEcCCCccchH-HHHHhh-c----ccCCcE---EEEeCCC-----
Q 009604 216 ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTR-IFIETV-L----PKMGIT---ATVIDPA----- 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all-------~pG-D~VIv~~~~y~~t~-~~~~~~-l----~~~Gi~---v~~vd~~----- 273 (531)
+.+++++||++|+..+++... ++| ++||..+..|++.. ..+... . ..++.. +..++..
T Consensus 152 ~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~ 231 (504)
T PLN02760 152 GKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRF 231 (504)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCccccc
Confidence 458899999999999998652 123 56777777776642 111100 0 111111 2222210
Q ss_pred -----C--------HHHHHHhcc---CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCC-CCc---
Q 009604 274 -----D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA-TPL--- 329 (531)
Q Consensus 274 -----d--------~e~Le~al~---~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a-~~~--- 329 (531)
+ .++|++++. ++++.+|++|......|.+.+ +++|.++|++||+++|+||++. .+-
T Consensus 232 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~ 311 (504)
T PLN02760 232 HLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT 311 (504)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch
Confidence 1 134666663 224889999999888888887 9999999999999999999973 211
Q ss_pred --cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh-----hhcCC--CchHHHHHHHHHHHHHHHH--
Q 009604 330 --NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGG--ALNPNAAYLIIRGMKTLHL-- 398 (531)
Q Consensus 330 --~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~-----~~~G~--~~s~~~a~l~l~~L~tl~~-- 398 (531)
.......-.|+++ +.|.+++.. ...|++++++++.+.+.... ...+. ..+|..+..++..|+.+..
T Consensus 312 ~~a~e~~gv~PDivt--lgK~lggG~-~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~ 388 (504)
T PLN02760 312 MFGCDKYNIKPDLVS--LAKALSSAY-MPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERN 388 (504)
T ss_pred hhHHHhcCCCCcEEE--ecccccCCc-cccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 1122233478766 789998642 22566778888888765310 01222 2357777776666766543
Q ss_pred HHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC
Q 009604 399 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 454 (531)
Q Consensus 399 r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g 454 (531)
.+++..+..++|.+.|++.. .+|.. ...+|.|.|+.+++..
T Consensus 389 l~~~~~~~g~~l~~~L~~l~-----~~~~v----------~~vrG~Gl~~gie~~~ 429 (504)
T PLN02760 389 IPEHVNKIAPRFQDGIKAFS-----GSPII----------GEIRGTGLILGTEFVD 429 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHh-----cCCCe----------eeEEeCceEEEEEEec
Confidence 23444444555555554320 11111 1235778899999853
No 319
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.27 E-value=2.2e-09 Score=116.31 Aligned_cols=271 Identities=14% Similarity=0.141 Sum_probs=146.6
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcc-----c--CC---cEEEEeCCCC---------
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP-----K--MG---ITATVIDPAD--------- 274 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l~-----~--~G---i~v~~vd~~d--------- 274 (531)
+.+++++||++|+..+++... ....+||.-...|++.......... + ++ ..+..++..+
T Consensus 116 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T PRK06918 116 KKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLT 195 (451)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCc
Confidence 478999999999999987432 2235677777777775422211100 0 01 1122221110
Q ss_pred --------HHHHHHhc----cCCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc----cccc
Q 009604 275 --------MEGLEAAL----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL 334 (531)
Q Consensus 275 --------~e~Le~al----~~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~----~~~l 334 (531)
++.+++.+ ..+++.+|++|......|.+++ +++|.++|++||+++|+||++..... ....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~ 275 (451)
T PRK06918 196 EEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIE 275 (451)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhH
Confidence 12344333 2335889999877665566543 78999999999999999999753211 1111
Q ss_pred ccC--CcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q 009604 335 SLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRM 410 (531)
Q Consensus 335 ~~g--aDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~L 410 (531)
.++ .|++ +++|.+++ | ...|++++++++++.+...........++..+..++..++.+.. ..++..+..+.+
T Consensus 276 ~~~v~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l 351 (451)
T PRK06918 276 HFDVVPDLI--TVSKSLGA-G-VPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVV 351 (451)
T ss_pred hcCCCCCEE--eeehhhcC-C-CccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 223 6754 68999985 4 45788888888887765332211223455555554445544421 112222333444
Q ss_pred HHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC-------CHHHHHHHHHHcCCCCcccccCCcccccc
Q 009604 411 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DLTATIKFIDALKIPYIAPSFGGCESIVD 483 (531)
Q Consensus 411 a~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g-------~~~~~~~fl~~L~~~~iavS~Gg~~Sli~ 483 (531)
.+.|++... .+|.. ...+|.|.++.+++.. +.....++.+.+...++.+..++.
T Consensus 352 ~~~l~~l~~----~~~~~----------~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~----- 412 (451)
T PRK06918 352 MNRFEEMKN----KYNCI----------GDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGT----- 412 (451)
T ss_pred HHHHHHHHh----hCCCc----------eeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCC-----
Confidence 444443210 01110 1123467888887731 223456677666554543332211
Q ss_pred cCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHH
Q 009604 484 QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 529 (531)
Q Consensus 484 ~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE----~~edli~dL~~AL~ 529 (531)
..+.|||++.+- +.++.++.|.++|+
T Consensus 413 --------------------~~~~lrl~p~l~~t~~~id~~l~~l~~~l~ 442 (451)
T PRK06918 413 --------------------YGNVIRVLMPLVITDEQLEEGLTIIEESLQ 442 (451)
T ss_pred --------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHH
Confidence 136799998763 33444555555554
No 320
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.26 E-value=8.4e-10 Score=125.89 Aligned_cols=135 Identities=16% Similarity=0.236 Sum_probs=101.2
Q ss_pred CCCcEEEeC-ChHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHH
Q 009604 214 GAESTVIMA-SGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLE 279 (531)
Q Consensus 214 g~e~~i~~s-SG~~Ai~~al~all~-------p-GD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le 279 (531)
|.+.+-+.. +|+.+..+.++++-. + .++|+++...|+..... +...|++++.++.+ |+++|+
T Consensus 557 Gmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas----a~~~GieVv~Vp~D~~G~iDle~L~ 632 (954)
T PRK12566 557 GFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS----AQMAGMRVVIVECDPDGNVDLDDLK 632 (954)
T ss_pred CCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH----HHHCCCEEEEeccCCCCCcCHHHHH
Confidence 666665555 777666565555421 2 35788998888765432 34458888888653 899999
Q ss_pred HhccC--CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-c-cccccccCCcEEEECCccccccC
Q 009604 280 AALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-L-NQKALSLGADLVLHSATKFIGGH 352 (531)
Q Consensus 280 ~al~~--~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-~-~~~~l~~gaDivv~S~sK~lgg~ 352 (531)
+++++ .++++|.+.+|++-.+...|+++|++++|++|+++++|.++... . ...|.++|+|+++.++||+|+++
T Consensus 633 a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P 709 (954)
T PRK12566 633 AKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIP 709 (954)
T ss_pred HHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcC
Confidence 99872 24889999999877666667999999999999999999997532 2 24467899999999999998743
No 321
>PRK07046 aminotransferase; Validated
Probab=99.26 E-value=2.5e-09 Score=115.75 Aligned_cols=197 Identities=19% Similarity=0.208 Sum_probs=126.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHH-HHhhc-----c---cCCc------EEEEeCCCCHHH
Q 009604 215 AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IETVL-----P---KMGI------TATVIDPADMEG 277 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~-~~~~l-----~---~~Gi------~v~~vd~~d~e~ 277 (531)
.+.+.+++||++|+..+++... ...++|+.-...|++.... +.... . ..|+ .+..++.+|+++
T Consensus 130 ~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~ 209 (453)
T PRK07046 130 LPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAA 209 (453)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHH
Confidence 4678999999999999987432 2346788878788875321 11100 0 0121 233456679999
Q ss_pred HHHhccCCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCC----CCccccccccCCcEEEECCcccc
Q 009604 278 LEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA----TPLNQKALSLGADLVLHSATKFI 349 (531)
Q Consensus 278 Le~al~~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a----~~~~~~~l~~gaDivv~S~sK~l 349 (531)
+++.+...++.+|++|......|.+.+ +++|.++|+++|+++|+||++. .+-.+.....-.|+++ +.|.+
T Consensus 210 l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~PDi~t--~gK~l 287 (453)
T PRK07046 210 LEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGLEPDFLV--VGKPI 287 (453)
T ss_pred HHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCCCcccee--ehhhh
Confidence 999996446899999988877777665 7899999999999999999974 2212222233478886 78999
Q ss_pred ccCCCceEEEEEeChHHHHHHHHHh-------hhcCCC--chHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Q 009604 350 GGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGA--LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE 415 (531)
Q Consensus 350 gg~g~v~gG~iv~~~~li~~l~~~~-------~~~G~~--~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~ 415 (531)
+|. ...|++++++++++.+.... ..++++ .+|..+..++..|+.+.. ..++..+..++|.+.|+
T Consensus 288 ggG--~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~ 362 (453)
T PRK07046 288 AGG--VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLR 362 (453)
T ss_pred cCC--CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 964 45788889999888775311 012222 356666665556655422 13333344445555554
No 322
>PRK07678 aminotransferase; Validated
Probab=99.25 E-value=3.7e-09 Score=114.50 Aligned_cols=235 Identities=14% Similarity=0.154 Sum_probs=137.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHHHHhhc---------ccCCcEEEEeCCC-----
Q 009604 216 ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL---------PKMGITATVIDPA----- 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~-------pG-D~VIv~~~~y~~t~~~~~~~l---------~~~Gi~v~~vd~~----- 273 (531)
+.+++++||++|+..+++.... +| .+||.-...|++.....-... ....-.+..++..
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (451)
T PRK07678 106 YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRM 185 (451)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccc
Confidence 4688889999999999874321 23 578887777777432211110 0000011122211
Q ss_pred ---------C---HHHHHHhcc---CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC-c---c
Q 009604 274 ---------D---MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L---N 330 (531)
Q Consensus 274 ---------d---~e~Le~al~---~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~-~---~ 330 (531)
+ ++.+++.++ ..++.+|++|......|.+.+ ++++.++|++||+++|+||++... - .
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 265 (451)
T PRK07678 186 PGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKA 265 (451)
T ss_pred cccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchh
Confidence 1 223565563 235899999998877777765 889999999999999999996321 1 1
Q ss_pred --ccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh----hhcCC--CchHHHHHHHHHHHHHHHH--HH
Q 009604 331 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGG--ALNPNAAYLIIRGMKTLHL--RV 400 (531)
Q Consensus 331 --~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~----~~~G~--~~s~~~a~l~l~~L~tl~~--r~ 400 (531)
......-.|+++ +.|.+++.. ...|++++++++.+.+.... ...+. ..+|..+..++..|+.+.. .+
T Consensus 266 ~~~~~~gv~PDivt--~gK~lggG~-~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~ 342 (451)
T PRK07678 266 FGFMNYGVKPDIIT--MAKGITSAY-LPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLI 342 (451)
T ss_pred HHHHhcCCCCCEEE--eecccccCC-cceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHH
Confidence 122333478886 689998753 34678888888887765311 01222 3456666666666666643 22
Q ss_pred HHHHHHHHHHHHHHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC--------CHHHHHHHHHHcCC
Q 009604 401 QQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--------DLTATIKFIDALKI 468 (531)
Q Consensus 401 ~~~~~na~~La~~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g--------~~~~~~~fl~~L~~ 468 (531)
++..+..++|.+.|++ ++.+.. .+|.|.|+.+++.. +...+.++...+..
T Consensus 343 ~~~~~~g~~l~~~l~~~~~~~~~v~~------------------vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~ 404 (451)
T PRK07678 343 ERSAQLGELLLEQLKEELGEHPLVGD------------------IRGKGLLVGIELVNDKETKEPADNDKVASVVAACKE 404 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEE------------------EEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHH
Confidence 3333444455444432 232222 24578899999842 12335566666655
Q ss_pred CCc
Q 009604 469 PYI 471 (531)
Q Consensus 469 ~~i 471 (531)
.++
T Consensus 405 ~Gv 407 (451)
T PRK07678 405 KGL 407 (451)
T ss_pred CCc
Confidence 443
No 323
>PRK06062 hypothetical protein; Provisional
Probab=99.25 E-value=2.9e-09 Score=115.30 Aligned_cols=180 Identities=13% Similarity=0.127 Sum_probs=112.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcc----------cCCcEEEEeC---------CC
Q 009604 215 AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP----------KMGITATVID---------PA 273 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l~----------~~Gi~v~~vd---------~~ 273 (531)
.+.+.+++||++|+..+++... ....+||.....|++.....-..-. ..|+.....+ ..
T Consensus 112 ~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 191 (451)
T PRK06062 112 LSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATT 191 (451)
T ss_pred CCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCC
Confidence 4678999999999999987432 2235788777777764322111100 0122111001 01
Q ss_pred C-------HHHHHHhccC---CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----cc--ccc
Q 009604 274 D-------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----LN--QKA 333 (531)
Q Consensus 274 d-------~e~Le~al~~---~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~----~~--~~~ 333 (531)
| ++.+++.++. +++.+|++|......|.+.+ +++|.++|+++|+++|+||++... .. ...
T Consensus 192 ~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~ 271 (451)
T PRK06062 192 EEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEH 271 (451)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHh
Confidence 2 5677777742 34899999999888888887 999999999999999999996532 11 122
Q ss_pred cccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCC--CchHHHHHHHHHHHHHHH
Q 009604 334 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAAYLIIRGMKTLH 397 (531)
Q Consensus 334 l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~--~~s~~~a~l~l~~L~tl~ 397 (531)
...-.|+++ +.|.+++. -...|++++++++.+.+.......+. .-+|..+..++..|+.+.
T Consensus 272 ~gv~PDi~t--~gK~lggG-~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~ 334 (451)
T PRK06062 272 FGVVPDLIT--FAKGVNSG-YVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAME 334 (451)
T ss_pred cCCCCCeee--echhhhcC-CcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 233468775 78999863 12256677777887776432111222 234666666666666653
No 324
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.24 E-value=3.6e-09 Score=114.30 Aligned_cols=214 Identities=13% Similarity=0.083 Sum_probs=121.0
Q ss_pred cEEEe-CChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcc----c--CC---cEEEEeCCCC----------
Q 009604 217 STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP----K--MG---ITATVIDPAD---------- 274 (531)
Q Consensus 217 ~~i~~-sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l~----~--~G---i~v~~vd~~d---------- 274 (531)
..+++ +||++|+..+++... ....+|+.....|++.......... + ++ ..+.+++..+
T Consensus 103 ~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (442)
T TIGR00709 103 KLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGG 182 (442)
T ss_pred cEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCc
Confidence 34554 899999999987432 2235788888888775433222111 0 00 1122222111
Q ss_pred ---H----HHHHHhcc-----CCCcEEEEEeCCCCCCCccc-C---HHHHHHHHHhcCCEEEEeCCCCCCc----c--cc
Q 009604 275 ---M----EGLEAALN-----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATPL----N--QK 332 (531)
Q Consensus 275 ---~----e~Le~al~-----~~~tklV~lesP~NPtG~v~-d---l~~I~~la~~~gi~lIvD~a~a~~~----~--~~ 332 (531)
. +.+++.+. ..++.+|++|.+.+..|.+. + +++|.++|++||+++|.||++.... . ..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~ 262 (442)
T TIGR00709 183 EAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFE 262 (442)
T ss_pred hhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHH
Confidence 1 12333332 12488999998887777664 3 7899999999999999999964321 1 11
Q ss_pred ccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q 009604 333 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRM 410 (531)
Q Consensus 333 ~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~L 410 (531)
....-.|+++ ++|.+++ | ...|+++++++ ++.+...........+|..+..++..|+.+.. -.++..+....+
T Consensus 263 ~~gv~PDiv~--~gK~l~~-G-~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l 337 (442)
T TIGR00709 263 HAGIEPDFVV--MSKAVGG-G-LPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERI 337 (442)
T ss_pred HcCCCCcEEE--EcccccC-C-cccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 1233468888 7899987 4 44667777766 34332111111112356666666666665532 123333344444
Q ss_pred HHHHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 411 AKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 411 a~~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
.+.|++ +|.|. +.+|.|.|+.+++.
T Consensus 338 ~~~L~~l~~~~~~v~------------------~vrG~Gl~~~ie~~ 366 (442)
T TIGR00709 338 TSFLDDMIKEHPCIG------------------NVRGRGLMQGIMIV 366 (442)
T ss_pred HHHHHHHHHhCCCee------------------eeeccceEEEEEEc
Confidence 454443 22222 23567889999984
No 325
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.23 E-value=5.6e-09 Score=113.13 Aligned_cols=266 Identities=15% Similarity=0.120 Sum_probs=151.2
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc-----ccCCc-----EEEEeCCC----------
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PKMGI-----TATVIDPA---------- 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l-----~~~Gi-----~v~~vd~~---------- 273 (531)
+.+.+++||++|+..+++... ....+||.....|++......... .+.+. .+.+++..
T Consensus 114 ~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 193 (457)
T PRK05639 114 PKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGIN 193 (457)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcccccccccc
Confidence 568999999999999987432 233568777777777432211110 00111 12233221
Q ss_pred ---CH--------HHHHHhc-----cCCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----c
Q 009604 274 ---DM--------EGLEAAL-----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----L 329 (531)
Q Consensus 274 ---d~--------e~Le~al-----~~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~----~ 329 (531)
+. +.+++.+ ..+++.+|++|......|.+.+ +++|.++|++||+++|+||++... .
T Consensus 194 ~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~ 273 (457)
T PRK05639 194 GYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGK 273 (457)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCch
Confidence 12 2355543 1235899999988877777654 789999999999999999996521 1
Q ss_pred --cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHH
Q 009604 330 --NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNS 405 (531)
Q Consensus 330 --~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~ 405 (531)
.......-.|+++ +.|.+++. ...|++++++++.+.... ........+|..+..++..|+.+.. .+++..+
T Consensus 274 ~~a~~~~gv~PDiv~--~gK~l~gG--~pi~av~~~~~i~~~~~~-~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~ 348 (457)
T PRK05639 274 WFASEWFEVKPDLII--FGKGVASG--MGLSGVIGRKELMDLTSG-SALLTPAANPVISAAAEATLEIIEEENLLKNALK 348 (457)
T ss_pred HHHHHhcCCCCCEEE--echhhcCC--CcceeEEehHHHHhhcCC-CcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 1122233478888 78999864 235778888888772211 1111223456666665556665532 1233333
Q ss_pred HHHHHHHHHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-----HHHHHHHHHHcCCCCcccccC
Q 009604 406 TALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTATIKFIDALKIPYIAPSFG 476 (531)
Q Consensus 406 na~~La~~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-----~~~~~~fl~~L~~~~iavS~G 476 (531)
..++|.+.|++ ++.+. +.+|.|.|+.+++..+ .+....+.+.+...++-+...
T Consensus 349 ~g~~l~~~L~~l~~~~~~~~------------------~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~ 410 (457)
T PRK05639 349 VGEFIKKRLLEMKESFEVIG------------------DVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSY 410 (457)
T ss_pred HHHHHHHHHHHHHHhCCCEE------------------eeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeec
Confidence 44445555543 22221 2356788999988421 223455666654434322211
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 477 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 477 g~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
|..++.|||+.-+-.+++.++.+.++|+
T Consensus 411 -------------------------g~~~~~lr~~Ppl~it~~~id~~~~~l~ 438 (457)
T PRK05639 411 -------------------------GMFGNVIRITPPLVITKEIAEKGLEIME 438 (457)
T ss_pred -------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHH
Confidence 1124679998877555555554444443
No 326
>PRK06105 aminotransferase; Provisional
Probab=99.22 E-value=4.7e-09 Score=113.91 Aligned_cols=220 Identities=14% Similarity=0.145 Sum_probs=131.9
Q ss_pred CcEEEeCChHHHHHHHHHHhc------c-CC-CEEEEcCCCccchHHHHHhh------cccCCc---EEEEeCCC-----
Q 009604 216 ESTVIMASGMSASTVMLLALV------P-AG-GHIVTTTDCYRKTRIFIETV------LPKMGI---TATVIDPA----- 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all------~-pG-D~VIv~~~~y~~t~~~~~~~------l~~~Gi---~v~~vd~~----- 273 (531)
+.+++++||++|+.++++... . +| .+||.....|++.......+ -+.++. .+..++..
T Consensus 110 ~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~ 189 (460)
T PRK06105 110 SKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRF 189 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCccccc
Confidence 568899999999999988532 1 22 46777777776643111000 001111 12222211
Q ss_pred -------------CHHHHHHhcc---CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCC-Cc---
Q 009604 274 -------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT-PL--- 329 (531)
Q Consensus 274 -------------d~e~Le~al~---~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~-~~--- 329 (531)
..+++++.+. .+++.+|++|......|.+.+ +++|.++|++||+++|+||++.. +-
T Consensus 190 ~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~ 269 (460)
T PRK06105 190 GLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN 269 (460)
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch
Confidence 1355677663 235899999998887788776 89999999999999999999632 11
Q ss_pred --cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhh-----hcC--CCchHHHHHHHHHHHHHHHH--
Q 009604 330 --NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-----VLG--GALNPNAAYLIIRGMKTLHL-- 398 (531)
Q Consensus 330 --~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~-----~~G--~~~s~~~a~l~l~~L~tl~~-- 398 (531)
.......-.|+++ ++|.+++.. ...|++++++++.+.+..... .++ ...+|..+..++..|+.+..
T Consensus 270 ~f~~~~~~v~PDi~~--~gK~lggG~-~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~ 346 (460)
T PRK06105 270 MFGCETFGIKPDILV--MSKQLSSSY-QPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERD 346 (460)
T ss_pred hhhHHhcCCCCCeee--eecccccCc-ccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 1222233468776 789998642 346788888888877653211 012 23456777666666766643
Q ss_pred HHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 399 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 399 r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
.+++..+..+.|.+.|++.. .+|.. .+.+|.|.++.|++.
T Consensus 347 l~~~v~~~g~~l~~~L~~l~-----~~~~v----------~~vrG~Gl~~gie~~ 386 (460)
T PRK06105 347 LVGNAAERGARLQARLRALA-----DHPLV----------GEVRGVGLIAAVELV 386 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhh-----cCCCe----------EEEEecceEEEEEEe
Confidence 23444444455555554320 11211 123567889999984
No 327
>PRK07482 hypothetical protein; Provisional
Probab=99.22 E-value=5.7e-09 Score=113.30 Aligned_cols=218 Identities=12% Similarity=0.073 Sum_probs=128.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------cC-CCEEEEcCCCccchHHH-H--------HhhcccCCcEEEEeCCC----
Q 009604 215 AESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIF-I--------ETVLPKMGITATVIDPA---- 273 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all-------~p-GD~VIv~~~~y~~t~~~-~--------~~~l~~~Gi~v~~vd~~---- 273 (531)
.+.+++++||++|+..+++... .+ ..+||.-...|++.... + ...+...--.+..++..
T Consensus 111 ~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 190 (461)
T PRK07482 111 MSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYR 190 (461)
T ss_pred cCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCcccc
Confidence 3578899999999999987542 12 25688877778774211 1 00010000011111100
Q ss_pred --------------CHHHHHHhcc---CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----
Q 009604 274 --------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP---- 328 (531)
Q Consensus 274 --------------d~e~Le~al~---~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~---- 328 (531)
+++++++.+. .+++.+|++|......|.+.+ +++|.++|++||+++|+||++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG 270 (461)
T PRK07482 191 RADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLG 270 (461)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc
Confidence 3567777773 134899999988876676653 789999999999999999995422
Q ss_pred --ccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHH-----hhhcCC--CchHHHHHHHHHHHHHHHHH
Q 009604 329 --LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGG--ALNPNAAYLIIRGMKTLHLR 399 (531)
Q Consensus 329 --~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~-----~~~~G~--~~s~~~a~l~l~~L~tl~~r 399 (531)
+.......-.|+++ +.|.++|.- ...|++++++++.+.+... ....+. .-+|..+..++..|+.+...
T Consensus 271 ~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~ 347 (461)
T PRK07482 271 SMFGSDHYGIEPDLIT--VAKGLTSAY-APLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERE 347 (461)
T ss_pred chhhHHhcCCCCCEEE--EccccccCc-cccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 11222334478988 689998642 1246667777777766421 011222 23566666666666655321
Q ss_pred --HHHHHHHHHHHHHHHH----cCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 400 --VQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 400 --~~~~~~na~~La~~L~----~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
.++..+..+.+.+.|+ ++|.|. ..+|.|.|+.+++.
T Consensus 348 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~------------------~vrG~Glm~giel~ 389 (461)
T PRK07482 348 NLVGNAAEVGAYFRARLRAAFGDHPLVG------------------EVRGVGMLAAVEFV 389 (461)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCEE------------------EEeeceeEEEEEec
Confidence 2333333344444443 233222 23567889999995
No 328
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.22 E-value=5.5e-09 Score=113.13 Aligned_cols=235 Identities=14% Similarity=0.146 Sum_probs=135.6
Q ss_pred CcEEEeCChHHHHHHHHHHhc-------cC-CCEEEEcCCCccchHHHHHhhcc------cCC---cEEEEeCC------
Q 009604 216 ESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIFIETVLP------KMG---ITATVIDP------ 272 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all-------~p-GD~VIv~~~~y~~t~~~~~~~l~------~~G---i~v~~vd~------ 272 (531)
+.+++++||++|+..+++... .+ ..+||.....|++.......... .++ ..+..++.
T Consensus 115 ~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 194 (453)
T PRK06943 115 GHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGA 194 (453)
T ss_pred CEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcccc
Confidence 468899999999999987541 12 35788888888774311100000 000 01111211
Q ss_pred -----------CCHHHHHHhccC--CCcEEEEEeC-CCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----c-
Q 009604 273 -----------ADMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----L- 329 (531)
Q Consensus 273 -----------~d~e~Le~al~~--~~tklV~les-P~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~----~- 329 (531)
.+++++++.++. .++.+|++|. +....|.+.+ +++|.++|++||+++|.||++... .
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~ 274 (453)
T PRK06943 195 RPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTF 274 (453)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcch
Confidence 124677777742 2589999998 4666676543 789999999999999999996421 1
Q ss_pred -cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh----hhcCCC--chHHHHHHHHHHHHHHHH--HH
Q 009604 330 -NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGGA--LNPNAAYLIIRGMKTLHL--RV 400 (531)
Q Consensus 330 -~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~----~~~G~~--~s~~~a~l~l~~L~tl~~--r~ 400 (531)
.......-.|+++ +.|.++|. -...|++++++++.+.+.... ...+.+ -+|..+..++..|+.+.. -+
T Consensus 275 fa~~~~gv~PDivt--~gKgl~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~ 351 (453)
T PRK06943 275 FACEQAGVWPDFLC--LSKGISGG-YLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVL 351 (453)
T ss_pred hHHHhCCCCCCeEe--eehhhccC-cccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 1222334478888 58998863 224677778888877664210 112222 356666666666666543 12
Q ss_pred HHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCH----HHHHHHHHHcCC
Q 009604 401 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL----TATIKFIDALKI 468 (531)
Q Consensus 401 ~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~----~~~~~fl~~L~~ 468 (531)
++..+.-+++.+.|++.. .+|.+ .+.+|.|.++.+++..+. ....++...+..
T Consensus 352 ~~~~~~G~~l~~~L~~l~-----~~~~v----------~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~ 408 (453)
T PRK06943 352 ARNARKSARLRAALAPLA-----AHPQV----------RHLRQRGTIFAFDVALDGDAARTFSRRFFEAALE 408 (453)
T ss_pred HHHHHHHHHHHHHHHHHh-----cCCCE----------EeEeccccEEEEEEccCCCcchHHHHHHHHHHHH
Confidence 333344444555554320 12221 123578889999995221 123455555543
No 329
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.22 E-value=7.8e-09 Score=111.64 Aligned_cols=266 Identities=14% Similarity=0.086 Sum_probs=149.1
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc-----c--cC---CcEEEEeCC----------C
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----P--KM---GITATVIDP----------A 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l-----~--~~---Gi~v~~vd~----------~ 273 (531)
+.+++++||++|+..+++... ...++|+.....|++.....-..- . .+ .-.+..++. .
T Consensus 116 ~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (441)
T PRK05769 116 KKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIE 195 (441)
T ss_pred CEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCC
Confidence 568899999999999987432 223578877777776432211110 0 00 011222221 1
Q ss_pred C--------HHHHHH-hcc----CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc------
Q 009604 274 D--------MEGLEA-ALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN------ 330 (531)
Q Consensus 274 d--------~e~Le~-al~----~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~------ 330 (531)
+ ++.+++ .++ ..++.+|++|......|.+.+ +++|.++|++||+++|+||++.....
T Consensus 196 ~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a 275 (441)
T PRK05769 196 NPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFA 275 (441)
T ss_pred chHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceeh
Confidence 1 233555 222 235899999999888898888 99999999999999999999753111
Q ss_pred ccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 009604 331 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTLHL-RVQQQNSTA 407 (531)
Q Consensus 331 ~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~L~tl~~-r~~~~~~na 407 (531)
........|+++ ++|.+++. ..+|++++++++.+.+.. ..+.+ .++..+..++..|+.+.. .+++..+..
T Consensus 276 ~~~~gv~pDivt--~~K~l~~G--~p~gav~~~~~i~~~~~~---~~~~T~~g~p~~~aaa~a~L~~l~~~~~~~~~~~g 348 (441)
T PRK05769 276 IEHFGVEPDIIT--LAKAIAGG--LPLGAVIGRAELMFLPPG---SHANTFGGNPVAAAAALATLEELEEGLLENAQKLG 348 (441)
T ss_pred hhccCCCCCEEE--EcccccCC--cccEEEEEehhhhhcCCC---CCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222358875 67999853 446778888877643221 12222 246666655556665543 233333444
Q ss_pred HHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-----HHHHHHHHHHcCCCCcccccCCccccc
Q 009604 408 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTATIKFIDALKIPYIAPSFGGCESIV 482 (531)
Q Consensus 408 ~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-----~~~~~~fl~~L~~~~iavS~Gg~~Sli 482 (531)
+++.+.|++... .+|.. ...+|.|.++.+++..+ .+....+.+.+...++-+.
T Consensus 349 ~~l~~~L~~l~~----~~~~~----------~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~-------- 406 (441)
T PRK05769 349 EYLRKELKELKE----KYEFI----------GDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLL-------- 406 (441)
T ss_pred HHHHHHHHHHHH----hCCCe----------eeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEe--------
Confidence 555555543200 01110 12246788999998432 1234455555543332211
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 483 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 483 ~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
| ...+.|||+.-+..+++.|+.+.++|+
T Consensus 407 --~-----------------~~~~~lr~~p~l~~t~~~id~~~~~l~ 434 (441)
T PRK05769 407 --G-----------------AGKSAIRIIPPLIITEEEADIGLEILE 434 (441)
T ss_pred --c-----------------CCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 1 013578998877555555554444443
No 330
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.22 E-value=3.4e-09 Score=113.87 Aligned_cols=236 Identities=14% Similarity=0.124 Sum_probs=137.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc-------CCCEEEEcCCCccchHHHHHhhcc-------cCC---cEEEEeC------
Q 009604 215 AESTVIMASGMSASTVMLLALVP-------AGGHIVTTTDCYRKTRIFIETVLP-------KMG---ITATVID------ 271 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~-------pGD~VIv~~~~y~~t~~~~~~~l~-------~~G---i~v~~vd------ 271 (531)
.+.+++++||++|+..+++.... ...+||.-...|++.....-.... .++ -.+.+++
T Consensus 103 ~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 182 (428)
T PRK07986 103 LECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRF 182 (428)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCccc
Confidence 35788999999999999874321 235788888888763211101000 000 0111221
Q ss_pred -----CCCHHHHHHhccC--CCcEEEEEeCC-CCCCCccc-C---HHHHHHHHHhcCCEEEEeCCCCCCcc-------cc
Q 009604 272 -----PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATPLN-------QK 332 (531)
Q Consensus 272 -----~~d~e~Le~al~~--~~tklV~lesP-~NPtG~v~-d---l~~I~~la~~~gi~lIvD~a~a~~~~-------~~ 332 (531)
..|++++++.++. .++.+|++|.. ..-.|.+. + +++|.++|++||+++|+||++ +++. ..
T Consensus 183 ~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~ 261 (428)
T PRK07986 183 DGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACE 261 (428)
T ss_pred chhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeec
Confidence 1356778877752 24789999985 54445433 2 889999999999999999996 3221 12
Q ss_pred ccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh---hhcCC--CchHHHHHHHHHHHHHHHH--HHHHHHH
Q 009604 333 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGG--ALNPNAAYLIIRGMKTLHL--RVQQQNS 405 (531)
Q Consensus 333 ~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~---~~~G~--~~s~~~a~l~l~~L~tl~~--r~~~~~~ 405 (531)
......|+++ +.|.++|. -+..|++++++++.+.+.... ...+. ..+|..+..++..|+.+.. .+++..+
T Consensus 262 ~~gv~PDi~t--~gK~l~gG-~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~ 338 (428)
T PRK07986 262 HAGIAPDILC--LGKALTGG-TMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAA 338 (428)
T ss_pred ccCCCCCEEE--echhhhCC-cccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 2223467875 79999743 234567778888888775411 01222 2356666666666666542 2344444
Q ss_pred HHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCC
Q 009604 406 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 470 (531)
Q Consensus 406 na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~ 470 (531)
..+++.+.|++.. .+|.+ .+.+|.|.++.+++... .....+.+.+...+
T Consensus 339 ~g~~l~~~l~~l~-----~~~~i----------~~vRg~Gl~~~ve~~~~-~~~~~~~~~l~~~G 387 (428)
T PRK07986 339 IEAQLREELAPLR-----DAPMV----------ADVRVLGAIGVVETTRP-VNMAALQRFFVEQG 387 (428)
T ss_pred HHHHHHHHHHHHh-----cCCCE----------EeEeccceEEEEEeCCc-ccHHHHHHHHHHCC
Confidence 5555555555321 12211 23356788999999643 23456666665444
No 331
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.21 E-value=5.6e-10 Score=124.89 Aligned_cols=157 Identities=13% Similarity=0.162 Sum_probs=115.7
Q ss_pred CCCcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----------C-----HHH
Q 009604 214 GAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----------D-----MEG 277 (531)
Q Consensus 214 g~e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----------d-----~e~ 277 (531)
|++++.++.+|+ .++.+++++++++||.|++++++|.+.+.. +-..|+..+++.+. + .+.
T Consensus 209 gAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~a----Lilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~ 284 (713)
T PRK15399 209 GAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHL----LMMSDVVPIWLKPTRNALGILGGIPRREFTRDS 284 (713)
T ss_pred CCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHH----HHHcCCeeEEecccccccCCcCCCChhhccHHH
Confidence 899999999998 889999999999999999999999997753 34457777776532 2 388
Q ss_pred HHHhccCC----CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEE-EEeCCCCCCccc-------ccccc--CCcEE--
Q 009604 278 LEAALNNN----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV-CIDGTFATPLNQ-------KALSL--GADLV-- 341 (531)
Q Consensus 278 Le~al~~~----~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~l-IvD~a~a~~~~~-------~~l~~--gaDiv-- 341 (531)
++++|+++ +++++++.+|+ ..|.+.|+++|+++| |+.+ ++||+|+....+ .++.. |+|.+
T Consensus 285 I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~ 360 (713)
T PRK15399 285 IEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIF 360 (713)
T ss_pred HHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeee
Confidence 88888643 23689998885 789999999999998 6766 699998753322 22323 57877
Q ss_pred -EECCccccccCCCceEEEEEeChHH-HHHHHHHhhhcCCC
Q 009604 342 -LHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGGA 380 (531)
Q Consensus 342 -v~S~sK~lgg~g~v~gG~iv~~~~l-i~~l~~~~~~~G~~ 380 (531)
++|.||.+++.. .+.++-.+..+ .++++.....+.++
T Consensus 361 ~tQStHKtL~alT--QaS~iHvk~~vd~~~~n~a~~m~~ST 399 (713)
T PRK15399 361 ETQSTHKMLAAFS--QASLIHIKGEYDEETFNEAFMMHTST 399 (713)
T ss_pred eeeehhccccccc--hheeeeecCCCCHHHHHHHHHHHcCC
Confidence 999999999875 35555444332 24555555555543
No 332
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.20 E-value=4.7e-09 Score=112.70 Aligned_cols=236 Identities=14% Similarity=0.117 Sum_probs=133.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHHHHhhcc-------cCC---cEEEEeCC----
Q 009604 215 AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP-------KMG---ITATVIDP---- 272 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~-------pG-D~VIv~~~~y~~t~~~~~~~l~-------~~G---i~v~~vd~---- 272 (531)
.+.+.+++||++|+..+++.... +| .+|+.....|++.......... .++ -.+.+++.
T Consensus 100 ~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 179 (422)
T PRK05630 100 LDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVR 179 (422)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCccc
Confidence 35789999999999999874321 23 5788888887773221111100 000 01122211
Q ss_pred ----CC----HHHHHHhccCCCcEEEEEeCC-CCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC-c---c--ccc
Q 009604 273 ----AD----MEGLEAALNNNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L---N--QKA 333 (531)
Q Consensus 273 ----~d----~e~Le~al~~~~tklV~lesP-~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~-~---~--~~~ 333 (531)
.+ .+.+++.+.+ ++.+|++|.. ....|.+.+ +++|.++|++||+++|+||++... - . ...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~ 258 (422)
T PRK05630 180 GSSPQEISEYLRSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLA 258 (422)
T ss_pred CCChHHHHHHHHHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHh
Confidence 11 2455665655 4999999984 666666543 789999999999999999996321 0 1 111
Q ss_pred cccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh----hhcCC--CchHHHHHHHHHHHHHHHH--HHHHHHH
Q 009604 334 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGG--ALNPNAAYLIIRGMKTLHL--RVQQQNS 405 (531)
Q Consensus 334 l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~----~~~G~--~~s~~~a~l~l~~L~tl~~--r~~~~~~ 405 (531)
...-.|++ ++.|.++|. -..+|++++++++.+.+.... ..++. ..+|..+..++..++.+.. ..++..+
T Consensus 259 ~gv~PDi~--t~gK~l~gG-~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~ 335 (422)
T PRK05630 259 AGVTPDIM--CVGKALTGG-FMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKR 335 (422)
T ss_pred cCCCCCee--eeechhhcC-ccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 22336777 478999652 123678888888877764210 01222 2456666666666666542 2233334
Q ss_pred HHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCC
Q 009604 406 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 470 (531)
Q Consensus 406 na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~ 470 (531)
....+.+.|++. . .+|.+ .+.+|.|.++.+++... .....+.+.+...+
T Consensus 336 ~g~~l~~~L~~l---~--~~~~v----------~~vRg~Gl~~~ie~~~~-~~~~~~~~~~~~~G 384 (422)
T PRK05630 336 IEAELIAGLSPL---A--HLPGV----------ADVRVLGAIGVVEMEQP-VDMEEATQAAVDHG 384 (422)
T ss_pred HHHHHHHHHHHh---h--cCCCe----------eeeeccccEEEEEECCc-ccHHHHHHHHHHCC
Confidence 444444444421 0 12221 22356789999999642 22445555554433
No 333
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.20 E-value=2.9e-09 Score=114.60 Aligned_cols=268 Identities=13% Similarity=0.146 Sum_probs=151.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcc--------C------CCEEEEcCCCccchHHHHHhhcc------cCC-------cEEE
Q 009604 216 ESTVIMASGMSASTVMLLALVP--------A------GGHIVTTTDCYRKTRIFIETVLP------KMG-------ITAT 268 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~--------p------GD~VIv~~~~y~~t~~~~~~~l~------~~G-------i~v~ 268 (531)
+.+++++||++|+..+++...+ . +.+||.....|++.......... .+. +...
T Consensus 104 ~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p 183 (431)
T TIGR03251 104 PHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNP 183 (431)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCC
Confidence 5689999999999999874421 1 36788888888774322211100 000 0000
Q ss_pred Ee--C--------C-----CCHHHHHHhcc--CCCcEEEEEeCCCCCCCccc----CHHHHHHHHHhcCCEEEEeCCCCC
Q 009604 269 VI--D--------P-----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFAT 327 (531)
Q Consensus 269 ~v--d--------~-----~d~e~Le~al~--~~~tklV~lesP~NPtG~v~----dl~~I~~la~~~gi~lIvD~a~a~ 327 (531)
+. + . .+++++++.+. .+++.+|++|......|.+. -+++|.++|++||+++|+||++..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG 263 (431)
T TIGR03251 184 KLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTG 263 (431)
T ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhc
Confidence 00 0 0 12445555663 23589999999887778765 288999999999999999999752
Q ss_pred C-cc-----ccccccCCcEEEECCccccccCCCceEEEEEeCh--HHHHHHHHHhhhcCCC--chHHHHHHHHHHHHHHH
Q 009604 328 P-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTLH 397 (531)
Q Consensus 328 ~-~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~--~li~~l~~~~~~~G~~--~s~~~a~l~l~~L~tl~ 397 (531)
. .. ........|+++ +.|.+. ++|++.+++ ++...........+.+ .++..+..++..|+.+.
T Consensus 264 ~GrtG~~~a~~~~gv~PDi~~--~gK~~~-----~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 336 (431)
T TIGR03251 264 VGLTGTAWAYQQLGVQPDIVA--FGKKTQ-----VCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIE 336 (431)
T ss_pred cCccchHHHHHhcCCCCCEEE--ecccCc-----cceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 1 11 122334578887 567752 256666543 2221111101111222 34555555555555543
Q ss_pred H--HHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCccccc
Q 009604 398 L--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 475 (531)
Q Consensus 398 ~--r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~ 475 (531)
. .+++..+..+++.+.|++... .+|.+. ...+|.|.|+.++++. ......+...|...++-+.
T Consensus 337 ~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~i---------~~vrg~G~~~~i~~~~-~~~~~~~~~~l~~~Gvl~~- 401 (431)
T TIGR03251 337 EERLVDNARVQGAHLLARLHELAA----EFPHLV---------SNPRGRGLMCAFDLPS-TADRDEVIRQLYREGVLLL- 401 (431)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHH----hCccce---------ecccccceeEEEEeCC-HHHHHHHHHHHHhCCeEEe-
Confidence 2 123334444455554543100 112110 0114568899999964 2345567776654443221
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhC
Q 009604 476 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 531 (531)
Q Consensus 476 Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~i 531 (531)
|. ..+.|||+..+..+++.++.+.++|+++
T Consensus 402 ---------~~-----------------g~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 402 ---------GC-----------------GERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred ---------cC-----------------CCCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 10 1256999999999999999999998763
No 334
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.19 E-value=5.6e-09 Score=112.32 Aligned_cols=268 Identities=13% Similarity=0.128 Sum_probs=156.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc-------CC-CEEEEcCCCccch-HHHHH---------hhcccCCcEEEEeCC----
Q 009604 215 AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKT-RIFIE---------TVLPKMGITATVIDP---- 272 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~-------pG-D~VIv~~~~y~~t-~~~~~---------~~l~~~Gi~v~~vd~---- 272 (531)
.+.+++++||++|+..+++.... +| .+|+.-...|++. ...+. ..+...--.+.+++.
T Consensus 104 ~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 183 (429)
T PRK06173 104 LNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIK 183 (429)
T ss_pred cCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcc
Confidence 35789999999999999874321 33 5688888877773 21110 000000001122221
Q ss_pred -------CCHHHHHHhccC--CCcEEEEEeCC-CCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc-------c
Q 009604 273 -------ADMEGLEAALNN--NNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-------Q 331 (531)
Q Consensus 273 -------~d~e~Le~al~~--~~tklV~lesP-~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~-------~ 331 (531)
.++++|++.+.. +++.+|++|.. ....|.+.+ +++|.++|++||+++|+||++ +++. .
T Consensus 184 ~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~ 262 (429)
T PRK06173 184 FGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFAL 262 (429)
T ss_pred cchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHH
Confidence 135667777742 25899999985 666666543 789999999999999999997 3321 1
Q ss_pred cccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh---hhcCC--CchHHHHHHHHHHHHHHHH--HHHHHH
Q 009604 332 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGG--ALNPNAAYLIIRGMKTLHL--RVQQQN 404 (531)
Q Consensus 332 ~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~---~~~G~--~~s~~~a~l~l~~L~tl~~--r~~~~~ 404 (531)
.......|+++ +.|.++|. -...+.+++++++.+.+.... ..++. ..+|..+..++..|+.+.. ..++..
T Consensus 263 ~~~gv~PDiv~--~gK~l~gG-~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~ 339 (429)
T PRK06173 263 EHAGVVPDIMC--IGKALTGG-YLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQ 339 (429)
T ss_pred HhcCCCCCEEE--eehhhhCC-ccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 12233468887 79999643 233577778888877764210 11222 2457777766666666542 234444
Q ss_pred HHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCccccccc
Q 009604 405 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQ 484 (531)
Q Consensus 405 ~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~ 484 (531)
+..+.+.+.|++.. .+|.+ ...+|.|.|+.+++... .....+.+.|...++-+...
T Consensus 340 ~~g~~l~~~L~~~~-----~~~~v----------~~vRg~Gl~~~iel~~~-~~~~~i~~~l~e~Gi~v~~~-------- 395 (429)
T PRK06173 340 RIEAQLKQELAPAA-----EFDSV----------AEVRVLGAIGVVEMKEP-VNMATLQPRFVEHGIWVRPF-------- 395 (429)
T ss_pred HHHHHHHHHHHHhh-----cCCCe----------eeeeccceEEEEEeCCc-ccHHHHHHHHHHCCeEEEec--------
Confidence 55555666665321 12211 11245788999999642 33456666665444333211
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHh
Q 009604 485 PAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 530 (531)
Q Consensus 485 p~~~s~~~~~~~~~~~~gi~~~lIRlSvGl----E~~edli~dL~~AL~~ 530 (531)
.+.|||.--+ ++.+.+++.|+++|.+
T Consensus 396 --------------------g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 396 --------------------GKLVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred --------------------CCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 1356665433 5666777777777754
No 335
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.19 E-value=2.6e-09 Score=105.75 Aligned_cols=280 Identities=17% Similarity=0.176 Sum_probs=149.6
Q ss_pred CCcEEEeCChH-HHHHHHHHHhcc---CCC--EEEEc-CCCccchHHH-H-Hhhcc--cCCcEEEEe----CCCCHHHHH
Q 009604 215 AESTVIMASGM-SASTVMLLALVP---AGG--HIVTT-TDCYRKTRIF-I-ETVLP--KMGITATVI----DPADMEGLE 279 (531)
Q Consensus 215 ~e~~i~~sSG~-~Ai~~al~all~---pGD--~VIv~-~~~y~~t~~~-~-~~~l~--~~Gi~v~~v----d~~d~e~Le 279 (531)
.++.|..++|+ .+.+.++.-+.. .|+ .|+.+ .|+|-+.-.. + ...+- +-.++.... -..|.++|.
T Consensus 96 t~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~ 175 (417)
T COG3977 96 TAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH 175 (417)
T ss_pred ccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccceeeccCHHHcc
Confidence 46788888898 677766655532 243 45554 4566542110 0 00000 001111000 012555554
Q ss_pred HhccCCCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc----cc-cccC-CcEEEECCccccc
Q 009604 280 AALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-LSLG-ADLVLHSATKFIG 350 (531)
Q Consensus 280 ~al~~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~~-l~~g-aDivv~S~sK~lg 350 (531)
+.+ .+.+|++.-|+||||.+.- +.+|.++|++||++|++|++|+.|++. +. .-++ .-+.+.|+||.-
T Consensus 176 --i~e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~G- 251 (417)
T COG3977 176 --IGE-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKLG- 251 (417)
T ss_pred --ccc-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhcC-
Confidence 334 4899999999999999974 556777899999999999999987652 11 1233 337889999973
Q ss_pred cCCCceEEEEEeChHHHHHHHHHhhhcC---CCchHHHHH-HHHHH-HHHHHHHH-HHHHH-HHHHHHHHHHc-CCCceE
Q 009604 351 GHNDVLAGSISGSGKLVTQIRNLHHVLG---GALNPNAAY-LIIRG-MKTLHLRV-QQQNS-TALRMAKILEA-HPKVKR 422 (531)
Q Consensus 351 g~g~v~gG~iv~~~~li~~l~~~~~~~G---~~~s~~~a~-l~l~~-L~tl~~r~-~~~~~-na~~La~~L~~-~p~v~~ 422 (531)
-+| ...|+++++++++..+........ +.+.+..+. ++.++ |..+.+.+ +-..+ .++.....|+. .|....
T Consensus 252 LPG-~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~ 330 (417)
T COG3977 252 LPG-SRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRC 330 (417)
T ss_pred CCC-cceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccce
Confidence 333 458999999999888776543322 233333222 22111 12222111 11111 12222333332 232211
Q ss_pred EeCCCCCCCchhhhhhhhcCCcccE-EEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhc
Q 009604 423 VHYPGLKSHPEHHIATQQMTGFGGV-VSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKY 501 (531)
Q Consensus 423 V~~pgl~s~p~~~l~~~~~~g~g~i-vsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~ 501 (531)
..+ ++-|.+ +|+-+++-+...+.+++.||..+.-+-.|..+-... +. ++
T Consensus 331 ~iH----------------kpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl-~~-------------ew 380 (417)
T COG3977 331 LIH----------------KPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGL-DK-------------EW 380 (417)
T ss_pred eee----------------cCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCC-CC-------------CC
Confidence 111 112333 344454434567788999988777777775542111 00 01
Q ss_pred CCCCCeEEEEecCCC--HHHHHHHHHHHHH
Q 009604 502 GIMDNLVRFSFGVED--FEDLKADVLQALH 529 (531)
Q Consensus 502 gi~~~lIRlSvGlE~--~edli~dL~~AL~ 529 (531)
.=...++|+|.--++ .+.-+..|.++++
T Consensus 381 pH~hqC~Rmn~~~~~~~ie~Gva~lae~ve 410 (417)
T COG3977 381 PHTHQCMRMNYVPEPEKIEKGVAILAEEVE 410 (417)
T ss_pred CCccceEEEecCCCHHHHHHHHHHHHHHHH
Confidence 113578999987654 3444555554443
No 336
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.19 E-value=2.6e-09 Score=116.00 Aligned_cols=197 Identities=16% Similarity=0.203 Sum_probs=124.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhh----------cccCCc------EEEEeCCCCHH
Q 009604 215 AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV----------LPKMGI------TATVIDPADME 276 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~----------l~~~Gi------~v~~vd~~d~e 276 (531)
.+.+.+++||++|+..+++... ...++||.....|++....+... ....|+ .+..++.+|++
T Consensus 155 ~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~ 234 (474)
T PLN02482 155 VEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLE 234 (474)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChH
Confidence 4678999999999999987432 22367888778888854221110 001122 23345566899
Q ss_pred HHHHhccC--CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc------ccccccCCcEEEEC
Q 009604 277 GLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLGADLVLHS 344 (531)
Q Consensus 277 ~Le~al~~--~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~------~~~l~~gaDivv~S 344 (531)
++++.+.. +++.+|++|......|.+.+ +++|.++|++||+++|+||++. ++. +.......|+++
T Consensus 235 ~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR~g~~ga~~~~gv~PDi~t-- 311 (474)
T PLN02482 235 AVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFRIAYGGAQEYFGITPDLTT-- 311 (474)
T ss_pred HHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CeecCcchHhHHhCCCCCEEE--
Confidence 99988853 24889999999888887776 6689999999999999999973 221 111223467764
Q ss_pred CccccccCCCceEEEEEeChHHHHHHHHHh-hhcCCC--chHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHc
Q 009604 345 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGA--LNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA 416 (531)
Q Consensus 345 ~sK~lgg~g~v~gG~iv~~~~li~~l~~~~-~~~G~~--~s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~~ 416 (531)
+.|.+++. ...|++++++++++.+.... ...+.+ .+|..+..++..|+.+. ...++..+..+++.+.|++
T Consensus 312 ~gK~lggG--~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~ 386 (474)
T PLN02482 312 LGKVIGGG--LPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILE 386 (474)
T ss_pred ecchhhCC--CceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 68999864 33566688998888775311 112233 34555555555555553 2344444555556555553
No 337
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.17 E-value=3.7e-09 Score=113.76 Aligned_cols=195 Identities=13% Similarity=0.170 Sum_probs=122.3
Q ss_pred CcEEEeCChHHHHHHHHHHhc-cCC-CEEEEcCCCccchHHH-HHh-hc---------ccCC-----cEEEEeCCCCHHH
Q 009604 216 ESTVIMASGMSASTVMLLALV-PAG-GHIVTTTDCYRKTRIF-IET-VL---------PKMG-----ITATVIDPADMEG 277 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all-~pG-D~VIv~~~~y~~t~~~-~~~-~l---------~~~G-----i~v~~vd~~d~e~ 277 (531)
+.+.+++||++|+..+++... -.| .+|+.-...|++.... +.. .+ ..++ -....++.+|+++
T Consensus 111 ~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (433)
T PRK00615 111 HKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQI 190 (433)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHH
Confidence 578999999999999987432 123 5677777777773211 100 00 0000 0112234567888
Q ss_pred HHHhccC--CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCcc------ccccccCCcEEEECC
Q 009604 278 LEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLGADLVLHSA 345 (531)
Q Consensus 278 Le~al~~--~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~~------~~~l~~gaDivv~S~ 345 (531)
+++.+.. +++.+|++|......|.+.+ +++|.++|++||+++|+||++. ++. ........|+++ +
T Consensus 191 l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~R~G~~ga~~~~gv~PDi~~--~ 267 (433)
T PRK00615 191 FQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GFRVAQGGAAAIYHVKPDITV--Y 267 (433)
T ss_pred HHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cccccHhHHHHhcCCCCCeEE--E
Confidence 8888742 24789999999888888776 5699999999999999999973 221 111223468876 7
Q ss_pred ccccccCCCceEEEEEeChHHHHHHHHHhh-hcCCC--chHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Q 009604 346 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGA--LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE 415 (531)
Q Consensus 346 sK~lgg~g~v~gG~iv~~~~li~~l~~~~~-~~G~~--~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~ 415 (531)
.|.+++. ..+|++++++++++.+..... ..+.+ .+|..+..++..|+.+.. .+++..++.+++.+.|+
T Consensus 268 gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~ 340 (433)
T PRK00615 268 GKILGGG--LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIE 340 (433)
T ss_pred cccccCC--cceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999853 347888999998887753211 12222 356666666666665532 23344444455544444
No 338
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.17 E-value=1.4e-08 Score=110.24 Aligned_cols=221 Identities=17% Similarity=0.185 Sum_probs=126.5
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchH-HHHHhh-cc--c--CC---cEEEEeC--------CCC--
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETV-LP--K--MG---ITATVID--------PAD-- 274 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~-~~~~~~-l~--~--~G---i~v~~vd--------~~d-- 274 (531)
+.+++++||++|+..+++... ....+|+.-...|++.. ..+... .. + ++ -.+..++ ..+
T Consensus 131 ~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (459)
T PRK06082 131 NRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDAD 210 (459)
T ss_pred CEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChh
Confidence 578899999999999886432 22367777777776643 222100 00 0 00 0112222 111
Q ss_pred ------HHHHHHhccC-CCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCC----c--cccccccCC
Q 009604 275 ------MEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP----L--NQKALSLGA 338 (531)
Q Consensus 275 ------~e~Le~al~~-~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~----~--~~~~l~~ga 338 (531)
++.+++.++. .++.+|++|...+..+.+.| +++|.++|++||+++|+||++... . .......-.
T Consensus 211 ~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~P 290 (459)
T PRK06082 211 GSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEP 290 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCC
Confidence 3457777752 24889999998876444556 899999999999999999996431 1 112223347
Q ss_pred cEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHc
Q 009604 339 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA 416 (531)
Q Consensus 339 Divv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~ 416 (531)
|+++ +.|.+++.. ...|++++++++.+.............+|..+..++..|+.+.. .+++..+..++|.+.|++
T Consensus 291 Div~--~gKgl~gG~-~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~ 367 (459)
T PRK06082 291 DILC--IGKGLGGGL-VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLE 367 (459)
T ss_pred CEEE--ecccccCCC-CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 8887 789998642 23566677776654322110111223456666666666666532 233444444555555543
Q ss_pred CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 417 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 417 ~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
... .+|. -.+.+|.|.++.+++.
T Consensus 368 l~~----~~~~----------i~~vrG~Gl~~~ve~~ 390 (459)
T PRK06082 368 MKA----KYPL----------IGDVRGIGLLWGVELV 390 (459)
T ss_pred HHh----hCCC----------eeeeeeccceeEEEEc
Confidence 210 0111 0123567889999995
No 339
>PRK07481 hypothetical protein; Provisional
Probab=99.16 E-value=1.5e-08 Score=109.66 Aligned_cols=220 Identities=13% Similarity=0.137 Sum_probs=127.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHHHHhhc---------c--cCCcEEEEeC----
Q 009604 215 AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL---------P--KMGITATVID---- 271 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~-------pG-D~VIv~~~~y~~t~~~~~~~l---------~--~~Gi~v~~vd---- 271 (531)
.+.+.+++||++|+..+++.... +| .+||.-...|++........- . ..|+. .++
T Consensus 104 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~--~~~~~~~ 181 (449)
T PRK07481 104 MRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCF--HVETPWL 181 (449)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCE--EeCCCcc
Confidence 35688999999999999874321 23 578888888877432110100 0 01221 121
Q ss_pred ----C--CCHHH--------HHHhcc---CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC--
Q 009604 272 ----P--ADMEG--------LEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-- 328 (531)
Q Consensus 272 ----~--~d~e~--------Le~al~---~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~-- 328 (531)
. .|+++ +++.|. .+++.+|++|......|.+.+ +++|.++|+++|+++|.||++...
T Consensus 182 ~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGR 261 (449)
T PRK07481 182 YRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGR 261 (449)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCc
Confidence 1 13333 344442 235899999998877777654 889999999999999999995421
Q ss_pred --c--cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh-----hhcCCC--chHHHHHHHHHHHHHHH
Q 009604 329 --L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGA--LNPNAAYLIIRGMKTLH 397 (531)
Q Consensus 329 --~--~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~-----~~~G~~--~s~~~a~l~l~~L~tl~ 397 (531)
. .......-.|+++ +.|.+++.- ...|++++++++.+.+.... ...+.+ -+|..+..++..|+.+.
T Consensus 262 tG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~ 338 (449)
T PRK07481 262 TGSWFGSRGWGVKPDIMC--LAKGITSGY-VPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVV 338 (449)
T ss_pred CchhhHhhhcCCCCCEEE--EeecccCCC-cCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 1 1222333478887 589988631 23577788888877765311 112322 34666666555665553
Q ss_pred H--HHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 398 L--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 398 ~--r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
. .+++..+.-++|.+.|++... .+|. -.+.+|.|.|+.+++.
T Consensus 339 ~~~l~~~~~~~g~~l~~~L~~l~~----~~~~----------i~~vrG~Glm~gi~l~ 382 (449)
T PRK07481 339 REDLPANAAKRGAYLLEGLQPLKE----RFEL----------VGDVRGKGLMLALDLV 382 (449)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhh----cCCC----------eEEEeecceEEEEEec
Confidence 2 123333444444444443210 0111 1123567889999984
No 340
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.15 E-value=1.3e-09 Score=115.11 Aligned_cols=205 Identities=18% Similarity=0.209 Sum_probs=132.6
Q ss_pred CcEEEeCChHHHHHHHHHHhc--------cCC-----C-EEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHH
Q 009604 216 ESTVIMASGMSASTVMLLALV--------PAG-----G-HIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADME 276 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--------~pG-----D-~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e 276 (531)
...+++++|++++..++.+.. ..| + .|+++...|.+.. +.+..+|+.++.++. .|++
T Consensus 104 ~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~----Kaa~~lGlg~~~I~~~~~~~md~~ 179 (373)
T PF00282_consen 104 AGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIE----KAARILGLGVRKIPTDEDGRMDIE 179 (373)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHH----HHHHHTTSEEEEE-BBTTSSB-HH
T ss_pred CceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHH----HhcceeeeEEEEecCCcchhhhHH
Confidence 468889999999888775431 112 2 5777777887754 445556777776653 3778
Q ss_pred HHHHhccC----CC-cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc----cccc---cCCcEEEEC
Q 009604 277 GLEAALNN----NN-VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS---LGADLVLHS 344 (531)
Q Consensus 277 ~Le~al~~----~~-tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~----~~l~---~gaDivv~S 344 (531)
+|+++|.+ .. +-+|+....+..+|.+-|+++|.++|++++++++||.+|+..... +... ..+|-+..+
T Consensus 180 ~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d 259 (373)
T PF00282_consen 180 ALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITID 259 (373)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEE
T ss_pred HhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccccccccccccccccccccccccc
Confidence 88887743 11 236667777888999999999999999999999999999873321 1121 247999999
Q ss_pred CccccccCCCceEEEEEeCh-HHHHHHH----HHhh-------------h---cCCC-chHHHHHHHHH--HHHHHHHHH
Q 009604 345 ATKFIGGHNDVLAGSISGSG-KLVTQIR----NLHH-------------V---LGGA-LNPNAAYLIIR--GMKTLHLRV 400 (531)
Q Consensus 345 ~sK~lgg~g~v~gG~iv~~~-~li~~l~----~~~~-------------~---~G~~-~s~~~a~l~l~--~L~tl~~r~ 400 (531)
+||+++.+-+ .|++..++ ....... .+.. . .++. ......|+.++ |.+.+..++
T Consensus 260 ~HK~l~~P~~--~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i 337 (373)
T PF00282_consen 260 PHKWLGVPYG--CGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERI 337 (373)
T ss_dssp TTTTTS-SSS---EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCcc--ceeEEeecccchHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHH
Confidence 9999997764 46665554 3332211 0000 0 0111 12345565544 667788999
Q ss_pred HHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 401 QQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 401 ~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
++..+.++++++.|++++.++.+.-|
T Consensus 338 ~~~~~~a~~l~~~l~~~~~~el~~~~ 363 (373)
T PF00282_consen 338 RRCIELARYLADRLRKDPRFELVNEP 363 (373)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEESSTT
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 99999999999999999886544433
No 341
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.15 E-value=1.1e-08 Score=110.09 Aligned_cols=236 Identities=13% Similarity=0.097 Sum_probs=137.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHHHHhhcc-------cCC--c-EEEEeC------
Q 009604 216 ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP-------KMG--I-TATVID------ 271 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~-------pG-D~VIv~~~~y~~t~~~~~~~l~-------~~G--i-~v~~vd------ 271 (531)
+.+++++||++|+..+++.... +| .+||.....|++.......... .++ . .+..++
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 185 (427)
T TIGR00508 106 DCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRF 185 (427)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccc
Confidence 5789999999999998874321 22 5788888888774322211101 000 0 001111
Q ss_pred -----CCCHHHHHHhccC--CCcEEEEEeCC-CCCCCccc----CHHHHHHHHHhcCCEEEEeCCCCCC-c-----cccc
Q 009604 272 -----PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATP-L-----NQKA 333 (531)
Q Consensus 272 -----~~d~e~Le~al~~--~~tklV~lesP-~NPtG~v~----dl~~I~~la~~~gi~lIvD~a~a~~-~-----~~~~ 333 (531)
..|++++++.+.. .++.+|++|.. .+-.|... .+++|.++|+++|+++|+||++... - ....
T Consensus 186 ~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~ 265 (427)
T TIGR00508 186 DEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEH 265 (427)
T ss_pred cchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhh
Confidence 1145677777742 24889999985 54444432 4889999999999999999996321 1 1112
Q ss_pred cccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh---hhcCC--CchHHHHHHHHHHHHHHHH--HHHHHHHH
Q 009604 334 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGG--ALNPNAAYLIIRGMKTLHL--RVQQQNST 406 (531)
Q Consensus 334 l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~---~~~G~--~~s~~~a~l~l~~L~tl~~--r~~~~~~n 406 (531)
.....|+++ ++|.++| |-...+.+++++++.+.+.... ...+. ..+|..+..++..++.+.. ..++..+.
T Consensus 266 ~~v~pDi~~--~gK~l~g-G~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~ 342 (427)
T TIGR00508 266 AGVVPDILC--VGKALTG-GYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAI 342 (427)
T ss_pred cCCCCCEEE--echhhhc-CcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 234578776 7999964 3234677888888887775321 01111 2356666666666665432 23455556
Q ss_pred HHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCC
Q 009604 407 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 470 (531)
Q Consensus 407 a~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~ 470 (531)
..+|.+.|++... +|.+ ...+|.|.++.|++... .....+.+.|...+
T Consensus 343 ~~~l~~~L~~l~~-----~~~i----------~~vrg~G~~~~i~~~~~-~~~~~~~~~l~~~G 390 (427)
T TIGR00508 343 ENQLKRELSPLRK-----NPVV----------KDVRVLGAIGVVEMYKP-VNVEELQKKFVEQG 390 (427)
T ss_pred HHHHHHHHHHhhc-----CCCE----------EeEeccccEEEEEECCc-cCHHHHHHHHHHCC
Confidence 6666666664311 1211 12256788999999532 33456666664433
No 342
>PRK06149 hypothetical protein; Provisional
Probab=99.14 E-value=2.9e-08 Score=116.92 Aligned_cols=270 Identities=13% Similarity=0.095 Sum_probs=154.0
Q ss_pred CCcEEEeCChHHHHHHHHH---HhccCCCEEEEcCCCccchH-HHHHh--hc-------cc--CCcEEEEe--------C
Q 009604 215 AESTVIMASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTR-IFIET--VL-------PK--MGITATVI--------D 271 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~---all~pGD~VIv~~~~y~~t~-~~~~~--~l-------~~--~Gi~v~~v--------d 271 (531)
.+.+++++||++|+..+++ ++.. ...||.....|++.. ....- .. .. .++..... .
T Consensus 641 ~~~v~f~~SGsEA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~ 719 (972)
T PRK06149 641 LDTVFLVNSGSEANDLAIRLAWAASG-RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFR 719 (972)
T ss_pred cCEEEEeCCchHHHHHHHHHHHHhcC-CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCC
Confidence 4689999999999999987 3332 346776666666532 11100 00 00 01111100 0
Q ss_pred CCC-----HHHHHHhcc-----CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCC-CCccc-----
Q 009604 272 PAD-----MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQ----- 331 (531)
Q Consensus 272 ~~d-----~e~Le~al~-----~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a-~~~~~----- 331 (531)
..+ .+++++.++ ..++.+|++|......|.+.+ +++|.++|++||+++|+||++. .+-..
T Consensus 720 ~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a 799 (972)
T PRK06149 720 GADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWG 799 (972)
T ss_pred CcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchh
Confidence 011 233333332 225889999998888888887 9999999999999999999973 21111
Q ss_pred -cccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 009604 332 -KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL-GGALNPNAAYLIIRGMKTLHLRVQQQNSTAL- 408 (531)
Q Consensus 332 -~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~-G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~- 408 (531)
.......||++ +.|.+++. ...|++++++++.+.+......+ +...+|..+..++..|+.+.. +...++++
T Consensus 800 ~e~~gv~PDivt--~gK~lg~G--~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~--e~l~~~~~~ 873 (972)
T PRK06149 800 FEQQGVVPDIIT--MAKGMGNG--HPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE--EKLQENARR 873 (972)
T ss_pred hhhcCCCCCEEE--ecccccCC--eeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHH
Confidence 11223478874 78999864 45788889988887765311111 123467777776666766542 23344443
Q ss_pred ---HHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC-------CHHHHHHHHHHcCCCCcccccCCc
Q 009604 409 ---RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DLTATIKFIDALKIPYIAPSFGGC 478 (531)
Q Consensus 409 ---~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g-------~~~~~~~fl~~L~~~~iavS~Gg~ 478 (531)
+|.+.|++... .+|.. ...+|.|.|+.+++.. ..+....+.+.+...++-+...
T Consensus 874 ~G~~l~~~L~~l~~----~~~~i----------~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~-- 937 (972)
T PRK06149 874 VGDHLKARLEALAD----RHPLI----------GAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT-- 937 (972)
T ss_pred HHHHHHHHHHHHHH----hCCCe----------EEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec--
Confidence 44444432100 11110 1235778899999842 1234556777665544333211
Q ss_pred ccccccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHHh
Q 009604 479 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 530 (531)
Q Consensus 479 ~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG----lE~~edli~dL~~AL~~ 530 (531)
|...+.|||.-- -++.+.+++.|+++|..
T Consensus 938 -----------------------g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 938 -----------------------GDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred -----------------------CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 111356776544 35566666677776653
No 343
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.13 E-value=6.9e-09 Score=109.40 Aligned_cols=261 Identities=14% Similarity=0.125 Sum_probs=157.2
Q ss_pred EEEeCChHHHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCCc-EEEEeCC-----CCHHHHHHhccCCCcEEE
Q 009604 218 TVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGI-TATVIDP-----ADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~all-~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi-~v~~vd~-----~d~e~Le~al~~~~tklV 290 (531)
.++.+||+.++.+++..++ ++||+|++.. .| +. ++..++++.+|+ ++..++. .++++++. ++ . |
T Consensus 61 ~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~F-G~-r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~~---~-v 131 (374)
T TIGR01365 61 GIVPASDTGAVEMALWSMLGCRGVDVLAWE-SF-GK-GWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--KN---D-V 131 (374)
T ss_pred EEECCchHHHHHHHHHHcCCCCCCeEEEEC-HH-HH-HHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--CC---C-E
Confidence 5568899999999999999 5899888764 33 32 233356677788 4665542 36777762 22 1 3
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHH
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ 369 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~ 369 (531)
++++--..||...|+++|.+.. +++++|||.+-+.+. ..+.. ++|+++.|..|.++++++ .++++.+++.+++
T Consensus 132 ~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--~iDv~~tgsQK~L~~ppG--ls~v~vs~~Al~~ 205 (374)
T TIGR01365 132 VFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--KLDVVTFSWQKVLGGEGA--HGMLILSPRAVAR 205 (374)
T ss_pred EEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh--HCcEEEEechhccCCCCc--eEEEEECHHHHHH
Confidence 4434444579999987666322 589999999954332 22222 499999999999998874 4677778877665
Q ss_pred HHHH---------hh----------hc-CC---CchHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHcCCCc
Q 009604 370 IRNL---------HH----------VL-GG---ALNPNAAYLIIRGMK------TLHLRVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 370 l~~~---------~~----------~~-G~---~~s~~~a~l~l~~L~------tl~~r~~~~~~na~~La~~L~~~p~v 420 (531)
.... .. .. +. +.+....+.++..++ .++.+.+++.++++.+.+++++....
T Consensus 206 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l 285 (374)
T TIGR01365 206 LESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWI 285 (374)
T ss_pred HhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 4421 00 01 21 222233333334442 27788899999999999999987532
Q ss_pred eEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHH-----H-----HHHHHHHcCCCCcccccCCcccccccCccccc
Q 009604 421 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT-----A-----TIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 490 (531)
Q Consensus 421 ~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~-----~-----~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~ 490 (531)
. .++ .++.+ ....++.|.++.+.. + ..+|.+.|+..++.+..|...
T Consensus 286 ~--~~~---~~~~~--------rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~----------- 341 (374)
T TIGR01365 286 H--FLA---ETPEI--------RSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYR----------- 341 (374)
T ss_pred c--cCC---CChhh--------cCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccc-----------
Confidence 1 111 11111 123466677743211 2 567788887656544433211
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 491 WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 491 ~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
..+..+||.-.-+-..+.++.|..+|+
T Consensus 342 ------------~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 342 ------------DAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred ------------cCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 113579998554444555566666654
No 344
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.13 E-value=2e-08 Score=109.06 Aligned_cols=212 Identities=13% Similarity=0.102 Sum_probs=122.0
Q ss_pred cEEEe-CChHHHHHHHHHHhc-cC-CCEEEEcCCCccchHHHHHhhcc------cCC---cEEEEeCCC-----------
Q 009604 217 STVIM-ASGMSASTVMLLALV-PA-GGHIVTTTDCYRKTRIFIETVLP------KMG---ITATVIDPA----------- 273 (531)
Q Consensus 217 ~~i~~-sSG~~Ai~~al~all-~p-GD~VIv~~~~y~~t~~~~~~~l~------~~G---i~v~~vd~~----------- 273 (531)
..+++ +||++|+..+++... -. ..+||.....|++........-. .++ -.+.+++..
T Consensus 128 ~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 207 (464)
T PRK06938 128 KIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGG 207 (464)
T ss_pred eEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCch
Confidence 45566 699999999987432 23 35787777777774322111100 000 012233211
Q ss_pred ------CHHHHHHhccC-----CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----c--ccc
Q 009604 274 ------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----L--NQK 332 (531)
Q Consensus 274 ------d~e~Le~al~~-----~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~----~--~~~ 332 (531)
+++.+++.+.+ .++.+|++|......|.+.+ ++++.++|+++|+++|.||++... . ...
T Consensus 208 ~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e 287 (464)
T PRK06938 208 EAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFE 287 (464)
T ss_pred hhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHH
Confidence 25667777753 14899999988766676654 789999999999999999995422 1 122
Q ss_pred ccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHHHHHHHHHHHHHHHH--HHHHHHHHH
Q 009604 333 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTLHLR--VQQQNSTAL 408 (531)
Q Consensus 333 ~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~L~tl~~r--~~~~~~na~ 408 (531)
....-.|+++ +.|.++|. ...|++++++++ +.+... .++.+ -+|..+..++..|+.+... +++..+..+
T Consensus 288 ~~gv~PDiv~--~gKglggG--~PlsAv~~~~~~-~~~~~~--~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~ 360 (464)
T PRK06938 288 HAGIIPDVVV--LSKAIGGS--LPLAVVVYREWL-DTWQPG--AHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGE 360 (464)
T ss_pred hcCCCCCEEE--eeccccCC--CceEEEeehhHh-hccCCC--CCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 2334478888 58999863 446677777663 433211 12222 3466666666666655321 122223333
Q ss_pred HHHHHHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 409 RMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 409 ~La~~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
+|.+.|++ +|.+. ..+|.|.|+.+++.
T Consensus 361 ~l~~~L~~l~~~~~~i~------------------~VrG~Glm~gie~~ 391 (464)
T PRK06938 361 RLREHLRQLQRDYPQLG------------------DVRGRGLMLGVEIV 391 (464)
T ss_pred HHHHHHHHHHHhCCCee------------------eeeccceEEEEEec
Confidence 33333332 22222 23567889999984
No 345
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.13 E-value=1.4e-08 Score=110.30 Aligned_cols=220 Identities=14% Similarity=0.158 Sum_probs=127.2
Q ss_pred CcEEEeCChHHHHHHHHHHhc-------cC-CCEEEEcCCCccchHHHHHhhcc------cCC---cEEEEeCCC-----
Q 009604 216 ESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIFIETVLP------KMG---ITATVIDPA----- 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all-------~p-GD~VIv~~~~y~~t~~~~~~~l~------~~G---i~v~~vd~~----- 273 (531)
+.+++++||++|+..+++... ++ ..+||.-...|++.......+-. .++ -.+..++..
T Consensus 108 ~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~ 187 (466)
T PRK07030 108 SRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLR 187 (466)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCcccc
Confidence 568999999999999987542 12 35688888777774321111100 000 011122211
Q ss_pred ------------CHHHHHHhccC--CCcEEEEEeC-CCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCC----Cc-
Q 009604 274 ------------DMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PL- 329 (531)
Q Consensus 274 ------------d~e~Le~al~~--~~tklV~les-P~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~----~~- 329 (531)
+++++++.+.. +++.+|++|. .....|.+.+ +++|.++|+++|+++|+||++.. +.
T Consensus 188 ~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~ 267 (466)
T PRK07030 188 PEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTM 267 (466)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccc
Confidence 24566777742 2589999998 4555566543 78999999999999999999532 11
Q ss_pred -cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHH-----hhhcCCC--chHHHHHHHHHHHHHHHHH--
Q 009604 330 -NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGA--LNPNAAYLIIRGMKTLHLR-- 399 (531)
Q Consensus 330 -~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~-----~~~~G~~--~s~~~a~l~l~~L~tl~~r-- 399 (531)
.......-.|+++ +.|.++|. -...|++++++++.+.+... ....+.+ -+|..+..++..|+.+.+.
T Consensus 268 ~a~~~~gv~PDiv~--~gKgl~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l 344 (466)
T PRK07030 268 FACEQAGIRPDFLC--LSKALTGG-YLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNV 344 (466)
T ss_pred hHHHhcCCCCCEEe--eehhccCC-cccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCH
Confidence 1222334478888 58998863 22467788888888766421 0112322 3566666666666665431
Q ss_pred HHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 400 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 400 ~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
+++..+.-+++.+.|++.. .+|.+ .+.+|.|.++.+++.
T Consensus 345 ~~~~~~~G~~l~~~L~~l~-----~~~~v----------~~vrG~Gl~~gie~~ 383 (466)
T PRK07030 345 IENNRALARRMAEATAHLA-----DHPHV----------AEVRQTGMILAIEMV 383 (466)
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCE----------EEeEeceeEEEEEec
Confidence 2222233334444443320 12211 123567889999984
No 346
>PRK07036 hypothetical protein; Provisional
Probab=99.13 E-value=3.1e-08 Score=107.69 Aligned_cols=221 Identities=13% Similarity=0.157 Sum_probs=129.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhc------c-C-CCEEEEcCCCccchHHHHHhhccc------CC---cEEEEeCCCC---
Q 009604 215 AESTVIMASGMSASTVMLLALV------P-A-GGHIVTTTDCYRKTRIFIETVLPK------MG---ITATVIDPAD--- 274 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all------~-p-GD~VIv~~~~y~~t~~~~~~~l~~------~G---i~v~~vd~~d--- 274 (531)
.+.+.+++||++|+..+++... . + ..+|+.-...|++........-.. ++ ..+.+++..+
T Consensus 112 ~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 191 (466)
T PRK07036 112 LNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYR 191 (466)
T ss_pred cCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccc
Confidence 3568899999999999987431 1 2 257887777777743221111000 00 0122222111
Q ss_pred --------------HHHHHHhcc---CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC-----
Q 009604 275 --------------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----- 328 (531)
Q Consensus 275 --------------~e~Le~al~---~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~----- 328 (531)
++.+++.+. .+++.+|++|......|.+.+ +++|.++|++||+++|+||++...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~ 271 (466)
T PRK07036 192 RPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGH 271 (466)
T ss_pred cccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCch
Confidence 234555553 235899999999877788776 899999999999999999996321
Q ss_pred cc-cc-ccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHH-----hhhcCC--CchHHHHHHHHHHHHHHHH-
Q 009604 329 LN-QK-ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGG--ALNPNAAYLIIRGMKTLHL- 398 (531)
Q Consensus 329 ~~-~~-~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~-----~~~~G~--~~s~~~a~l~l~~L~tl~~- 398 (531)
+. .. ....-.|+++ +.|.+++. -...|++++++++.+.+... ....+. .-+|..+..++..|+.+..
T Consensus 272 ~~~~~~~~gv~PDivt--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~ 348 (466)
T PRK07036 272 FFASEAVFGIQPDIIT--FAKGLTSG-YQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMERE 348 (466)
T ss_pred hhhhhhhcCCCCCEEE--EccccccC-ccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 11 11 2233478876 68999763 12357777888888776531 011222 2356667666666666642
Q ss_pred -HHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 399 -RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 399 -r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
.+++..+..++|.+.|++. . .+|.. ...+|.|.++.+++.
T Consensus 349 ~l~~~~~~~g~~l~~~L~~l---~--~~~~v----------~~vrG~Gl~~~ve~~ 389 (466)
T PRK07036 349 GLCEHVREVGPYFEERLASL---R--ELPLV----------GDVRGDHLMACVECV 389 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHh---c--cCCCE----------EEEEeeceEEEEEEc
Confidence 2333334444455555421 1 12211 123578899999994
No 347
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.12 E-value=7.8e-09 Score=118.70 Aligned_cols=255 Identities=17% Similarity=0.218 Sum_probs=162.6
Q ss_pred EEEeCChHHHHHHHHHHh-c--cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeC
Q 009604 218 TVIMASGMSASTVMLLAL-V--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTES 294 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~al-l--~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~les 294 (531)
+-+...++++..+++++. . +++++|++++..|+.+...++..++..|++++.+| +++|++.+ + +.+|++.+
T Consensus 129 aSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~---~~~l~~~~--~-~~~v~~q~ 202 (939)
T TIGR00461 129 ASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD---CSDIKKAV--D-VFGCLLQY 202 (939)
T ss_pred hhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---HHHHhhcC--C-EEEEEEEC
Confidence 345556665555555553 2 33489999999999999888888888999998875 56677666 2 78999989
Q ss_pred CCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCC-CccccccccCCcEEEECCcccc-----ccCCCceEEEEEeChHHHH
Q 009604 295 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFI-----GGHNDVLAGSISGSGKLVT 368 (531)
Q Consensus 295 P~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~-~~~~~~l~~gaDivv~S~sK~l-----gg~g~v~gG~iv~~~~li~ 368 (531)
|+ -+|.+.|+++|.+++|++|.+++++.-... .+...|-++|+||++.+..++- ||++ +|++..++++..
T Consensus 203 Pn-~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~---aG~~a~~~~l~r 278 (939)
T TIGR00461 203 PA-TDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGPH---AAFFAVKDEYNR 278 (939)
T ss_pred CC-CCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCCc---eeeeeecHhhHh
Confidence 86 589999999999999999999999665433 3557788899999988776653 3443 788888877665
Q ss_pred HHHH-------------------------HhhhcCC---CchH-H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009604 369 QIRN-------------------------LHHVLGG---ALNP-N-----AAYLIIRGMKTLHLRVQQQNSTALRMAKIL 414 (531)
Q Consensus 369 ~l~~-------------------------~~~~~G~---~~s~-~-----~a~l~l~~L~tl~~r~~~~~~na~~La~~L 414 (531)
.+-. +++.-+. +... . ..|+...|-+-|...-++....+.++++.|
T Consensus 279 ~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L 358 (939)
T TIGR00461 279 KMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGL 358 (939)
T ss_pred hCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5421 0000000 0000 0 112232232333333344556777888888
Q ss_pred HcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCC
Q 009604 415 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 494 (531)
Q Consensus 415 ~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~ 494 (531)
++ .+++.+. + + +-..+.+.++. ..++++.+.+...++-.+.
T Consensus 359 ~~-~G~~~~~-~-----~-----------fF~~~~v~~~~--~~~~~i~~~~~~~gi~l~~------------------- 399 (939)
T TIGR00461 359 EN-DPHELIN-K-----T-----------WFDTLTVKVGN--GISSELLKAAEEFNINLRA------------------- 399 (939)
T ss_pred Hh-CCCcccC-C-----C-----------ccceEEEEeCC--CCHHHHHHHHHHCCCeeee-------------------
Confidence 76 4443221 1 1 12355666642 1244555555443322110
Q ss_pred HHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009604 495 QSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 495 ~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~ 529 (531)
..++.|++|+.--++++.|+.|.+++.
T Consensus 400 --------~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 400 --------VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred --------cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 124689999999888888999888873
No 348
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.12 E-value=1.9e-08 Score=109.43 Aligned_cols=221 Identities=13% Similarity=0.121 Sum_probs=125.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhhcc------cCC---cEEEEeCCC-----
Q 009604 216 ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLP------KMG---ITATVIDPA----- 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~-------p-GD~VIv~~~~y~~t~~~~~~~l~------~~G---i~v~~vd~~----- 273 (531)
+.+++++||++|+..+++.... + ..+||.....|++........-. .++ ..+.+++..
T Consensus 130 ~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~ 209 (472)
T PRK08742 130 SKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLA 209 (472)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCcccc
Confidence 4789999999999999875421 2 25788888888774321111100 000 011222211
Q ss_pred ------------CHHHHHHhcc--CCCcEEEEEeC-CCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCC----Ccc
Q 009604 274 ------------DMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PLN 330 (531)
Q Consensus 274 ------------d~e~Le~al~--~~~tklV~les-P~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~----~~~ 330 (531)
+++.+++.+. .+++.+|++|. ..+..|.+.+ ++++.++|+++|+++|.||++.. +..
T Consensus 210 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~ 289 (472)
T PRK08742 210 EPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTL 289 (472)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc
Confidence 2456666664 22589999998 4666676543 78999999999999999999542 111
Q ss_pred --ccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHH----hhhcCCC--chHHHHHHHHHHHHHHHHHHHH
Q 009604 331 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLGGA--LNPNAAYLIIRGMKTLHLRVQQ 402 (531)
Q Consensus 331 --~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~----~~~~G~~--~s~~~a~l~l~~L~tl~~r~~~ 402 (531)
......-.|+++ +.|.++|.- ...|++++++++.+.+... ....+.+ -+|..+..++..|+.+.+ +.
T Consensus 290 ~a~e~~gv~PDiv~--~gKgl~gG~-~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~--~~ 364 (472)
T PRK08742 290 FACEQAGVMPDLLC--LSKGLTGGF-LPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFAD--DD 364 (472)
T ss_pred hHHHhcCCCCCEEE--EcccccCCC-CCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHH--CC
Confidence 222334478888 589998641 2356777888887765421 0112333 356666665555655432 12
Q ss_pred HHHHHHHHHHHHHcCCC-ceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 403 QNSTALRMAKILEAHPK-VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 403 ~~~na~~La~~L~~~p~-v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
..++++++.++|++.-. +. .+|.+ ...+|.|.++.|++.
T Consensus 365 l~~~~~~~g~~l~~~~~~~~--~~~~i----------~dvRG~Gl~~giel~ 404 (472)
T PRK08742 365 VIARNQPTAARMTQLAAQIG--EHPHV----------ADVRQAGMVVAFELT 404 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHh--cCCCe----------eeEeccceEEEEEec
Confidence 23344444443332100 00 01111 123567889999995
No 349
>PRK07480 putative aminotransferase; Validated
Probab=99.12 E-value=2.3e-08 Score=108.43 Aligned_cols=221 Identities=16% Similarity=0.180 Sum_probs=126.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHHHHhh------cccCCc---EEEEeCCC----
Q 009604 215 AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV------LPKMGI---TATVIDPA---- 273 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all~-------pG-D~VIv~~~~y~~t~~~~~~~------l~~~Gi---~v~~vd~~---- 273 (531)
.+.+++++||++|+..+++.... +| .+||.....|++........ -..++. .+..++..
T Consensus 111 ~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~ 190 (456)
T PRK07480 111 FNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFG 190 (456)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccc
Confidence 35789999999999999874321 33 46777777777643111000 000111 11122210
Q ss_pred -----C--------HHHHHHhcc---CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCC----Cc
Q 009604 274 -----D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PL 329 (531)
Q Consensus 274 -----d--------~e~Le~al~---~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~----~~ 329 (531)
+ +++|++.+. .+++.+|++|......|.+.+ +++|.++|++||+++|+||++.. +.
T Consensus 191 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~ 270 (456)
T PRK07480 191 EGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGE 270 (456)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc
Confidence 1 255655442 125899999998877787765 89999999999999999999632 11
Q ss_pred --cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHH-Hh-hhcCC--CchHHHHHHHHHHHHHHHH--HHH
Q 009604 330 --NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LH-HVLGG--ALNPNAAYLIIRGMKTLHL--RVQ 401 (531)
Q Consensus 330 --~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~-~~-~~~G~--~~s~~~a~l~l~~L~tl~~--r~~ 401 (531)
.......-.|+++ +.|.++|. -...|++++++++.+.+.. .. ...+. ..+|..+..++..|+.+.. .++
T Consensus 271 ~~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~ 347 (456)
T PRK07480 271 WFGSQHFGIKPDLMT--IAKGLTSG-YIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVE 347 (456)
T ss_pred hhhhhhcCCCCCeee--eehhhccC-CccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence 1222233468776 68999863 1225667778888776631 11 11222 2356677666666666542 122
Q ss_pred HH-HHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 402 QQ-NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 402 ~~-~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
+. .+..+.|.+.|++.. .+|.. .+.+|.|.|+.+++.
T Consensus 348 ~~~~~~g~~l~~~l~~l~-----~~~~i----------~~vrG~Glm~gie~~ 385 (456)
T PRK07480 348 RVRDDTGPYLQKRLRELA-----DHPLV----------GEVRGVGLVGAIELV 385 (456)
T ss_pred HHHHHHHHHHHHHHHHhh-----cCCCe----------eeEEeecceEEEEEe
Confidence 22 233444555554310 12211 123567889999994
No 350
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.10 E-value=2.4e-08 Score=108.38 Aligned_cols=220 Identities=15% Similarity=0.128 Sum_probs=128.7
Q ss_pred CcEEEeCChHHHHHHHHHHhc-------cCC-CEEEEcCCCccchHHHHHhhcc------cCC---cEEEEeCC------
Q 009604 216 ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTRIFIETVLP------KMG---ITATVIDP------ 272 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all-------~pG-D~VIv~~~~y~~t~~~~~~~l~------~~G---i~v~~vd~------ 272 (531)
+.+++++||++|+..+++... .+| .+||.-...|++.....-.+-. .++ ..+..++.
T Consensus 117 ~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~ 196 (460)
T PRK06916 117 KKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRS 196 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCccccc
Confidence 568999999999999987432 133 5788888888774322111100 000 01111211
Q ss_pred -----------CCHHHHHHhccC--CCcEEEEEeC-CCCCCCccc-C---HHHHHHHHHhcCCEEEEeCCCCCC----c-
Q 009604 273 -----------ADMEGLEAALNN--NNVSLFFTES-PTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP----L- 329 (531)
Q Consensus 273 -----------~d~e~Le~al~~--~~tklV~les-P~NPtG~v~-d---l~~I~~la~~~gi~lIvD~a~a~~----~- 329 (531)
.+++++++.++. +++.+|++|. +....|.+. | +++|.++|+++|+++|+||++... .
T Consensus 197 ~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~ 276 (460)
T PRK06916 197 PYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKM 276 (460)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchh
Confidence 124566777742 2589999998 566667654 3 789999999999999999996321 1
Q ss_pred -cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHH-----hhhcCCC--chHHHHHHHHHHHHHHHH--H
Q 009604 330 -NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGA--LNPNAAYLIIRGMKTLHL--R 399 (531)
Q Consensus 330 -~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~-----~~~~G~~--~s~~~a~l~l~~L~tl~~--r 399 (531)
.......-.|+++ +.|.++|. -...|++++++++.+.+... ....+.+ .+|..+..++..|+.+.. .
T Consensus 277 ~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l 353 (460)
T PRK06916 277 FACEHENVTPDIMT--AGKGLTGG-YLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNL 353 (460)
T ss_pred hHHHhcCCCCCeee--eehhhhcC-ccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 1122233478886 68998853 22367778888887765421 0112222 256666666666665532 2
Q ss_pred HHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 400 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 400 ~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
+++..+..+++.+.|++.. . +|.+ ...+|.|.|+.+++.
T Consensus 354 ~~~~~~~g~~l~~~l~~l~---~--~~~v----------~~vrG~Glm~giel~ 392 (460)
T PRK06916 354 IEQVARKTEYVATQLEDLF---A--LKHV----------GDIRQLGLMVGIELV 392 (460)
T ss_pred HHHHHHHHHHHHHHHHHhh---c--CCCe----------EEeecCCceeeEEee
Confidence 3344444455555555321 0 1211 123577889999985
No 351
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.09 E-value=4.5e-08 Score=101.59 Aligned_cols=145 Identities=26% Similarity=0.391 Sum_probs=110.1
Q ss_pred EeCChHHHHHHHHHHh---ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCC
Q 009604 220 IMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 296 (531)
Q Consensus 220 ~~sSG~~Ai~~al~al---l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~ 296 (531)
++-.|+++-.+++++. -++.++++++..+|+.+...++...+.+|+++..++.+|.++++++ ++..+.+|+++.|+
T Consensus 142 m~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~-~~~~~~gv~vQyP~ 220 (450)
T COG0403 142 MLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESA-DDGDVFGVLVQYPN 220 (450)
T ss_pred hhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhc-cccCeEEEEEecCC
Confidence 3444554444444443 2335899999999999999999999999999999999999999998 54358999999998
Q ss_pred CCCC-cccCHHHHHHHHHhcCCEEEEeCC-CCCCccccccccCCcEEEECCccc-----cccCCCceEEEEEeChHHHHH
Q 009604 297 NPFL-RCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATKF-----IGGHNDVLAGSISGSGKLVTQ 369 (531)
Q Consensus 297 NPtG-~v~dl~~I~~la~~~gi~lIvD~a-~a~~~~~~~l~~gaDivv~S~sK~-----lgg~g~v~gG~iv~~~~li~~ 369 (531)
-.| ...|+.+|.+.+|++|.++++=.= .+-.+...|-++|+||++.+..-+ |||+. +|+...++++..+
T Consensus 221 -~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPh---ag~fA~~~~~~R~ 296 (450)
T COG0403 221 -TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPH---AGYFAVKDEFKRQ 296 (450)
T ss_pred -CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCcc---eeeeeEhHhHhhc
Confidence 567 677899999999999988776322 223455678889999999998764 45443 7888777666443
No 352
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.09 E-value=4.3e-09 Score=109.79 Aligned_cols=217 Identities=15% Similarity=0.190 Sum_probs=131.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------c-CCCEEEEcCCCccchHH-HH--------HhhcccCCcEEEEeCCCCHHH
Q 009604 215 AESTVIMASGMSASTVMLLALV-------P-AGGHIVTTTDCYRKTRI-FI--------ETVLPKMGITATVIDPADMEG 277 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all-------~-pGD~VIv~~~~y~~t~~-~~--------~~~l~~~Gi~v~~vd~~d~e~ 277 (531)
.+.+++++||++|+..+++... . ...+|+.....|++... .+ +.........+..++..++..
T Consensus 76 ~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 155 (339)
T PF00202_consen 76 LDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA 155 (339)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH
T ss_pred cceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch
Confidence 4568999999999999987544 2 33688888888876321 11 111122222345566666544
Q ss_pred ----------HHHh---ccCCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC------cccccc
Q 009604 278 ----------LEAA---LNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQKAL 334 (531)
Q Consensus 278 ----------Le~a---l~~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~------~~~~~l 334 (531)
+++. ...+++.+|++|......|...+ +++|.++|+++|+++|+||++... +.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~ 235 (339)
T PF00202_consen 156 DEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHY 235 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHH
T ss_pred hhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecc
Confidence 2222 22335899999998876665543 789999999999999999996432 222334
Q ss_pred ccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Q 009604 335 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAK 412 (531)
Q Consensus 335 ~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r--~~~~~~na~~La~ 412 (531)
....|+++. .|.+++. ...|++++++++.+.+..........-+|..+..++..|+.+... .++..+...++.+
T Consensus 236 gv~PDiv~~--gK~l~gG--~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~ 311 (339)
T PF00202_consen 236 GVDPDIVTF--GKGLGGG--LPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLRE 311 (339)
T ss_dssp TSSSSEEEE--EGGGGTT--SSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccCccccc--ccchhhh--hhcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHH
Confidence 456899985 5999875 457788888887766533221111223466666666666655432 3333344444444
Q ss_pred HHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 413 ILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 413 ~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
.|++ ++.+.. .+|.|.++.|++.
T Consensus 312 ~L~~l~~~~~~i~~------------------vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 312 GLRELAARYPLIGE------------------VRGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHHHTTTEEE------------------EEEETTEEEEEES
T ss_pred HHHHHHHhCCCeEE------------------EeeeCeEEEEEEE
Confidence 4432 233333 2467889999884
No 353
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.07 E-value=1.5e-08 Score=109.61 Aligned_cols=143 Identities=24% Similarity=0.372 Sum_probs=111.0
Q ss_pred CCCcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----------CCHHHHHHh
Q 009604 214 GAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----------ADMEGLEAA 281 (531)
Q Consensus 214 g~e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----------~d~e~Le~a 281 (531)
|+++..|+.+|+ .|+..++++++++||.|++++++|.+....+ -..|+...++.+ .+.+.++++
T Consensus 84 gAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~gl----ilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~~ 159 (557)
T COG1982 84 GADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGL----ILAGATPVYLEPSRNPLYGIIGGIPLETFKEA 159 (557)
T ss_pred CCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHH----HHcCCceEEecCCCCccccccCCCCHHHHHHH
Confidence 889999999998 8999999999999999999999999876443 233666555542 267888877
Q ss_pred ccCCC-c-EEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcc------ccccccCCcEEEECCccccccCC
Q 009604 282 LNNNN-V-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHN 353 (531)
Q Consensus 282 l~~~~-t-klV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~------~~~l~~gaDivv~S~sK~lgg~g 353 (531)
+.+++ . |++++.+|+ ..|.+.++++|.+.+++.++++.+|+++..... ....+.|+|+++.|.||.+++.+
T Consensus 160 l~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tqS~HK~l~alS 238 (557)
T COG1982 160 LLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQSTHKLLAALS 238 (557)
T ss_pred HHhChhhheeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEEEechhhhhhhhh
Confidence 65432 4 788887776 579999999999999999999999999654322 22344689999999999998765
Q ss_pred CceEEEEEeC
Q 009604 354 DVLAGSISGS 363 (531)
Q Consensus 354 ~v~gG~iv~~ 363 (531)
.+-.+-.+
T Consensus 239 --QaS~iHv~ 246 (557)
T COG1982 239 --QASMIHVK 246 (557)
T ss_pred --hhHHHhhC
Confidence 34444443
No 354
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.06 E-value=7.4e-08 Score=104.55 Aligned_cols=211 Identities=13% Similarity=0.099 Sum_probs=119.5
Q ss_pred EEEe-CChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcc------cC---CcEEEEeCCC------------
Q 009604 218 TVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP------KM---GITATVIDPA------------ 273 (531)
Q Consensus 218 ~i~~-sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l~------~~---Gi~v~~vd~~------------ 273 (531)
.+++ +||++|+..+++... ...++||.....|++.....-..-. .+ ...+.+++..
T Consensus 123 ~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (459)
T PRK06931 123 LQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGE 202 (459)
T ss_pred EEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCch
Confidence 4455 799999999987432 2345788888888775432211100 01 1112233321
Q ss_pred -CHHHH----HHhcc-----CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----c--cccc
Q 009604 274 -DMEGL----EAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----L--NQKA 333 (531)
Q Consensus 274 -d~e~L----e~al~-----~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~----~--~~~~ 333 (531)
+.+.+ ++.+. ..++.+|++|......|.+.+ +++|.++|++||+++|.||++... . ....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~ 282 (459)
T PRK06931 203 AGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEH 282 (459)
T ss_pred hHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhh
Confidence 12222 33332 124899999988877776654 789999999999999999995422 1 1222
Q ss_pred cccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Q 009604 334 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTLHL--RVQQQNSTALR 409 (531)
Q Consensus 334 l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~L~tl~~--r~~~~~~na~~ 409 (531)
...-.|+++ +.|.+++. ...|++++++++ +.+... .++.+ -+|..+..++..|+.+.. .+++..+.-++
T Consensus 283 ~gv~PDivt--~gK~l~gG--~Pi~av~~~~~~-~~~~~~--~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~ 355 (459)
T PRK06931 283 AGIEPDIIV--MSKAVGGG--LPLAVLGIKKEF-DAWQPG--GHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEW 355 (459)
T ss_pred cCCCCCEEE--ecccccCC--cceeeeeeHHHH-hhccCC--CCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 334478887 68999864 345666666553 443211 12222 356666666666665532 12222233334
Q ss_pred HHHHHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 410 MAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 410 La~~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
|.+.|++ +|.+. ..+|.|.|+.+++.
T Consensus 356 l~~~L~~l~~~~~~i~------------------~vrG~Glm~giel~ 385 (459)
T PRK06931 356 LKAQLAELQKRYPCIG------------------NVRGRGLMIGIEIV 385 (459)
T ss_pred HHHHHHHHHHhCCCeE------------------eEecCceEEEEEEc
Confidence 4444432 33222 23567889999984
No 355
>PLN02452 phosphoserine transaminase
Probab=99.05 E-value=2.3e-08 Score=105.33 Aligned_cols=224 Identities=11% Similarity=0.006 Sum_probs=141.2
Q ss_pred EEE-eCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe---C-----CCCHHHHHHhccCCCcE
Q 009604 218 TVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI---D-----PADMEGLEAALNNNNVS 288 (531)
Q Consensus 218 ~i~-~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~v---d-----~~d~e~Le~al~~~~tk 288 (531)
+++ .++|+.++.+++..++.+||++++-...+.+-+ +. +.++++|...... + ..++++++ .++ +.+
T Consensus 73 v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r-~~-~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~ 147 (365)
T PLN02452 73 VLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKK-AA-KEAKKYCKTNVIASGKDEKYTKIPSVSEWE--LTP-DAK 147 (365)
T ss_pred EEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHH-HH-HHHHHhCCCcEEEecCCCCCCCCCChHHcC--CCC-CCc
Confidence 554 478889999999999999998887766655533 23 4455666543332 1 12444442 123 377
Q ss_pred EEEEeCCCCCCCcc-cCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEEEEeChHH
Q 009604 289 LFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 366 (531)
Q Consensus 289 lV~lesP~NPtG~v-~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~l 366 (531)
.|++++-...+|.. .|++++. ++++++|.+...+ ...+..++|+|+ .|.+|.+|++| .|+++.++++
T Consensus 148 ~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~saqK~lGP~G---l~~v~vr~~~ 216 (365)
T PLN02452 148 FVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--AGAQKNVGPSG---VTIVIIRKDL 216 (365)
T ss_pred EEEECCCCCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcCEEE--EecccccCCCC---eEEEEEcHHH
Confidence 88876555567884 6776664 3899999997654 334555666655 69999999877 5788888888
Q ss_pred HHHHHHH-------hh--hcC---CCchHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCC
Q 009604 367 VTQIRNL-------HH--VLG---GALNPNAAYLIIRGMKTL------HLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 428 (531)
Q Consensus 367 i~~l~~~-------~~--~~G---~~~s~~~a~l~l~~L~tl------~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl 428 (531)
++++... .. ..+ .+.+....+.+...++.+ ..+.+++.+.++.+.++|++.+++ +.+..
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~---y~~~~ 293 (365)
T PLN02452 217 IGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGF---YVCPV 293 (365)
T ss_pred HhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc---ccCCC
Confidence 7664321 10 001 234444455544555543 345566778888888999876654 11111
Q ss_pred CCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCc
Q 009604 429 KSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 471 (531)
Q Consensus 429 ~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~i 471 (531)
.+.+ ....+++|.+++. +..++|++.++..++
T Consensus 294 --~~~~--------rs~~~vsF~~~~~-~~~~~f~~~~~~~g~ 325 (365)
T PLN02452 294 --EKSV--------RSLMNVPFTLGGS-ELEAEFVKEAAKAGM 325 (365)
T ss_pred --ChHH--------hCCeEEEEEcCCc-hhHHHHHHHHHHCCC
Confidence 1111 1345899999764 477889999987664
No 356
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.05 E-value=1.4e-08 Score=101.77 Aligned_cols=149 Identities=17% Similarity=0.249 Sum_probs=108.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCC-ccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEE
Q 009604 214 GAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDC-YRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~-y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV 290 (531)
++.+++++.+-+.-++-+|.+.+ .+|+.||++.-. |+.-+...+..+...++.....-.+.++++++++++. +.+|
T Consensus 92 ~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~~~~~~~dd-~AvV 170 (407)
T COG3844 92 RAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRALEEAITDD-VAVV 170 (407)
T ss_pred CCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChHHHHHhhccc-eEEE
Confidence 34566666666655666666654 348888877654 4433333333444444433222234678999999985 9999
Q ss_pred EEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEEEEeC
Q 009604 291 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS 363 (531)
Q Consensus 291 ~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~ 363 (531)
++.+.+--||...|+.+|.+++|++|++++-|=++..+ ++.+....|+|+.+.+..||++|..+..+|+.+.+
T Consensus 171 ~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~ 244 (407)
T COG3844 171 LLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAP 244 (407)
T ss_pred EeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEecc
Confidence 99999999999999999999999999999999998776 34555567999999999999997766667766543
No 357
>PRK06917 hypothetical protein; Provisional
Probab=99.05 E-value=1.5e-07 Score=101.97 Aligned_cols=221 Identities=14% Similarity=0.148 Sum_probs=126.6
Q ss_pred CcEEEeCChHHHHHHHHHHhc-------cCC-CEEEEcCCCccchHHHHHhhcc------cC-----CcEEEEeCC----
Q 009604 216 ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTRIFIETVLP------KM-----GITATVIDP---- 272 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all-------~pG-D~VIv~~~~y~~t~~~~~~~l~------~~-----Gi~v~~vd~---- 272 (531)
+.+++++||++|+..+++... .+| .+|+.-...|++.......... .+ ++.....+.
T Consensus 92 ~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 171 (447)
T PRK06917 92 NWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRC 171 (447)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCccccc
Confidence 468889999999999987541 133 5788877777774322211110 00 111000000
Q ss_pred -----------CCHHHHHHhccC---CCcEEEEEeCCCCC-CCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----c
Q 009604 273 -----------ADMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----L 329 (531)
Q Consensus 273 -----------~d~e~Le~al~~---~~tklV~lesP~NP-tG~v~d----l~~I~~la~~~gi~lIvD~a~a~~----~ 329 (531)
.+++.+++.++. +++.+|++|..... -|.+.+ +++|.++|+++|+++|+||++... .
T Consensus 172 ~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~ 251 (447)
T PRK06917 172 PVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGA 251 (447)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccc
Confidence 123566777652 24899999987643 344443 789999999999999999996421 1
Q ss_pred --cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhh--hcCCC--chHHHHHHHHHHHHHHHH--HHH
Q 009604 330 --NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGA--LNPNAAYLIIRGMKTLHL--RVQ 401 (531)
Q Consensus 330 --~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~--~~G~~--~s~~~a~l~l~~L~tl~~--r~~ 401 (531)
.......-.|+++ +.|.+++. -...|++++++++.+.+..... ..+.+ .+|..+..++..|+.+.. .++
T Consensus 252 ~~a~~~~gv~PDi~~--~gK~l~~G-~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~ 328 (447)
T PRK06917 252 MFAMEHWGVEPDIMT--LGKGLGAG-YTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPE 328 (447)
T ss_pred hhhHHhcCCCCCEEE--eeehhccC-CcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHH
Confidence 1122233468876 68999863 1236777788888877653211 12222 356666666666666532 233
Q ss_pred HHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 402 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 402 ~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
+..+.-+++.+.|++... .+|.. .+.+|.|.|+.+++.
T Consensus 329 ~~~~~g~~l~~~L~~l~~----~~~~i----------~~vrG~Gl~~~ie~~ 366 (447)
T PRK06917 329 KAAEKGEYLIKGLQKVQQ----QSTII----------GDVRGKGLLIGVEFV 366 (447)
T ss_pred HHHHHHHHHHHHHHHHHh----cCCCE----------EEEeecceEEEEEEe
Confidence 344444455555543210 11110 123567889999984
No 358
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=7.2e-09 Score=105.99 Aligned_cols=167 Identities=17% Similarity=0.145 Sum_probs=123.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCC-------
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNN------- 286 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~------- 286 (531)
|.+++|+.+.|.+++..++.++.+.||.|++......+... .++...-.+.+...+|+++++..+.+..
T Consensus 153 G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~----GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~~ 228 (467)
T KOG1358|consen 153 GTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQK----GLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKNP 228 (467)
T ss_pred CCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHHH----HHhhhhheeEEecCCCHHHHHHhccCcchhhhhcc
Confidence 89999999999999999999999999999998777666443 3333334566778889999988774421
Q ss_pred -----cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc---c-------cccCCcEEEECCcccccc
Q 009604 287 -----VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---A-------LSLGADLVLHSATKFIGG 351 (531)
Q Consensus 287 -----tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~---~-------l~~gaDivv~S~sK~lgg 351 (531)
-+.|++|...-++|.++|+.+|.++..+|...||+|+++..+...+ . ..-.+|+++.|+.-.++.
T Consensus 229 k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas 308 (467)
T KOG1358|consen 229 KKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS 308 (467)
T ss_pred ccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccc
Confidence 3578889999999999999999999999999999999976654321 0 012378999999888886
Q ss_pred CCCceEEEEEeChHH--HHHHHHHhhhcCCCchHHHHHH
Q 009604 352 HNDVLAGSISGSGKL--VTQIRNLHHVLGGALNPNAAYL 388 (531)
Q Consensus 352 ~g~v~gG~iv~~~~l--i~~l~~~~~~~G~~~s~~~a~l 388 (531)
. ||+.+|+.-. .+++......+...+.|..+-.
T Consensus 309 ~----GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~a 343 (467)
T KOG1358|consen 309 G----GGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGA 343 (467)
T ss_pred c----CceeecceeeEeeeeccccceeeeccCchhhhhh
Confidence 5 5788875432 2344433444555555554433
No 359
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.03 E-value=2.6e-08 Score=107.89 Aligned_cols=259 Identities=12% Similarity=0.058 Sum_probs=148.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcc--------------------------CC---CEEEEcCCCccchHHHHHhhc-----c
Q 009604 216 ESTVIMASGMSASTVMLLALVP--------------------------AG---GHIVTTTDCYRKTRIFIETVL-----P 261 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~--------------------------pG---D~VIv~~~~y~~t~~~~~~~l-----~ 261 (531)
+.+++++||++|+..+++.... +| .+||.....|++......... .
T Consensus 123 ~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~ 202 (464)
T TIGR00699 123 DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIH 202 (464)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 5689999999999999874411 11 268888888877532211110 0
Q ss_pred cCCc---EEEEeCC-------------------CCHHHHHHhccC--CCcEEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009604 262 KMGI---TATVIDP-------------------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCH 313 (531)
Q Consensus 262 ~~Gi---~v~~vd~-------------------~d~e~Le~al~~--~~tklV~lesP~NPtG~v~d----l~~I~~la~ 313 (531)
..+. .+.+++. .+++++++++.+ .++.+|++|......|.+.+ +++|.++|+
T Consensus 203 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~ 282 (464)
T TIGR00699 203 KLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITK 282 (464)
T ss_pred ccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 1011 0111110 135567777742 24899999999888888887 999999999
Q ss_pred hcCCEEEEeCCCCCC-c-----cccccccC--CcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCC--chH
Q 009604 314 KKGAIVCIDGTFATP-L-----NQKALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNP 383 (531)
Q Consensus 314 ~~gi~lIvD~a~a~~-~-----~~~~l~~g--aDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~--~s~ 383 (531)
+||+++|+||++... - ........ .|+++ +.|.+++. |++++++ .+..... ...+.+ .+|
T Consensus 283 ~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~g-----G~~~~~~-~~~~~~~--~~~~~T~~gnp 352 (464)
T TIGR00699 283 KHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQTA-----GYFFHDP-AFRPNKP--YRQFNTWMGDP 352 (464)
T ss_pred HcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhccC-----Cccccch-hccCCCC--cccccCCCCCH
Confidence 999999999996321 1 11112222 78866 68999643 3333332 1111001 112222 345
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHc----CC-CceEEeCCCCCCCchhhhhhhhcC--CcccEEEEEEcC
Q 009604 384 NAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HP-KVKRVHYPGLKSHPEHHIATQQMT--GFGGVVSFEVDG 454 (531)
Q Consensus 384 ~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~~----~p-~v~~V~~pgl~s~p~~~l~~~~~~--g~g~ivsf~l~g 454 (531)
..+..++..|+.+.. ..++..+.-+++.+.|++ +| .|.. .+ |.|.|+.++++.
T Consensus 353 ~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~------------------vRg~G~Glm~gie~~~ 414 (464)
T TIGR00699 353 SRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQN------------------LRGKGRGTFIAWDTPD 414 (464)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceee------------------ecccCeEEEEEEecCC
Confidence 555555555555532 112222223444444443 23 1221 23 578899999963
Q ss_pred CHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 455 DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 455 ~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.....++++.+...++-+.. ...+.|||..-+-.+++.|+.+.++|++
T Consensus 415 -~~~~~~i~~~~~~~Gvl~~~---------------------------~g~~~ir~~Ppl~it~~eid~~~~~l~~ 462 (464)
T TIGR00699 415 -EAKRDKLLKKARNNGVNIGG---------------------------CGVKAIRLRPMLVFQKHHADIFLEIISK 462 (464)
T ss_pred -HHHHHHHHHHHHHCCcEEec---------------------------CCCCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 34456777776544432211 0136799999988888888888888764
No 360
>PRK07483 hypothetical protein; Provisional
Probab=99.02 E-value=1.2e-07 Score=102.52 Aligned_cols=217 Identities=17% Similarity=0.234 Sum_probs=124.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHHHHhhc------ccCC---cEEEEeCC----CC
Q 009604 216 ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL------PKMG---ITATVIDP----AD 274 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~-------pG-D~VIv~~~~y~~t~~~~~~~l------~~~G---i~v~~vd~----~d 274 (531)
+.+.+++||++|+..+++.... +| .+||.....|++.....-..- ..++ ..+..++. .+
T Consensus 91 ~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~ 170 (443)
T PRK07483 91 EHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYRE 170 (443)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccc
Confidence 5789999999999999874321 33 468887777776432111100 0011 11122221 11
Q ss_pred --------------HHHHHHhcc---CCCcEEEEEeCCCC-CCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----
Q 009604 275 --------------MEGLEAALN---NNNVSLFFTESPTN-PFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP---- 328 (531)
Q Consensus 275 --------------~e~Le~al~---~~~tklV~lesP~N-PtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~---- 328 (531)
++++++++. .+++.+|++|.... ..|.+.+ +++|.++|++||+++|+||++...
T Consensus 171 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG 250 (443)
T PRK07483 171 QRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG 250 (443)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc
Confidence 256666553 12589999998874 2355543 889999999999999999996422
Q ss_pred --ccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh--hhcCCC--chHHHHHHHHHHHHHHHH--HH
Q 009604 329 --LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA--LNPNAAYLIIRGMKTLHL--RV 400 (531)
Q Consensus 329 --~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~--~~~G~~--~s~~~a~l~l~~L~tl~~--r~ 400 (531)
+.......-.|+++ +.|.+++. -...|++++++++.+.+.... ...+.+ -+|..+..++..|+.+.. .+
T Consensus 251 ~~~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~ 327 (443)
T PRK07483 251 TLFACEEDGVAPDLVT--IAKGLGAG-YQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLL 327 (443)
T ss_pred HHHHHhhcCCCCCeee--ehhhhccC-ccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 11122233478887 58999864 223677778888877664311 112222 346666665556655532 12
Q ss_pred HHHHHHHHHHHHHHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEc
Q 009604 401 QQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 453 (531)
Q Consensus 401 ~~~~~na~~La~~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~ 453 (531)
++..+..+.|.+.|++ +|.+. +.+|.|.|+.+++.
T Consensus 328 ~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vRG~Glm~gie~~ 366 (443)
T PRK07483 328 ANVRARGEQLRARLRERLGQHPHVG------------------DIRGRGLFVGVELV 366 (443)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCee------------------eEeecccEEEEEEe
Confidence 3333333444444432 22221 23567889999984
No 361
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.01 E-value=3.5e-08 Score=104.73 Aligned_cols=271 Identities=16% Similarity=0.155 Sum_probs=155.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------cCC-CEEEEcCCCccchH----------HHHHhhcccCCcEEEEeCC----
Q 009604 215 AESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTR----------IFIETVLPKMGITATVIDP---- 272 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all-------~pG-D~VIv~~~~y~~t~----------~~~~~~l~~~Gi~v~~vd~---- 272 (531)
-+.+++..||++|+.++++-.. +|. .++|.-...|++.. ..........-..+.+++.
T Consensus 105 l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y 184 (449)
T COG0161 105 LDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAY 184 (449)
T ss_pred ccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCccc
Confidence 3578899999999999986432 333 34777778887631 1110111100011111211
Q ss_pred -------------CCHHHHHHhccC---CCcEEEEEeCCCCC-CCcccC----HHHHHHHHHhcCCEEEEeCCCCC----
Q 009604 273 -------------ADMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VKLVSDLCHKKGAIVCIDGTFAT---- 327 (531)
Q Consensus 273 -------------~d~e~Le~al~~---~~tklV~lesP~NP-tG~v~d----l~~I~~la~~~gi~lIvD~a~a~---- 327 (531)
...++|++.|.. +++.++++|....- .|.+++ ++++.++|++|||++|.||+...
T Consensus 185 ~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRT 264 (449)
T COG0161 185 RRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRT 264 (449)
T ss_pred ccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcC
Confidence 114567777654 35889999988876 566554 88999999999999999999422
Q ss_pred Cc--cccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHH-hh--hcC--CCchHHHHHHHHHHHHHHHH--
Q 009604 328 PL--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-HH--VLG--GALNPNAAYLIIRGMKTLHL-- 398 (531)
Q Consensus 328 ~~--~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~-~~--~~G--~~~s~~~a~l~l~~L~tl~~-- 398 (531)
+- ...-...-.||++ +.|-+.+.--. .|+++.++++.+.+..- .. ..| .+-+|..|..++..|+.+..
T Consensus 265 G~~FA~e~~gi~PDi~~--~aKGLT~GY~P-l~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~ 341 (449)
T COG0161 265 GKMFACEHAGIVPDILC--LAKGLTGGYLP-LSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEED 341 (449)
T ss_pred chhhhhhhcCCCCCeee--ecccccccchh-hHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcC
Confidence 11 1222223468887 67988865433 44455566777766543 11 122 34468888887777776642
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHH--------HHHHHHHHc
Q 009604 399 RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT--------ATIKFIDAL 466 (531)
Q Consensus 399 r~~~~~~na~~La~~L~~----~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~--------~~~~fl~~L 466 (531)
.+++..+...++.+.|++ +|.|.. .++.|-|..+++..+.. ...++.+..
T Consensus 342 l~~~~~~~~~~l~~~L~~~l~~~p~Vgd------------------VR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~ 403 (449)
T COG0161 342 LLERVAEIGAYLQAGLQAALADHPLVGD------------------VRGLGLIGAIELVADKATKTPFEARVGARVRAAA 403 (449)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCcEEE------------------eeccceEEEEEEecccccccchhhhHHHHHHHHH
Confidence 233333444555555543 233332 24567788888864311 244555555
Q ss_pred CCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 467 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 467 ~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
...|+-+...|.--.+.+|.+ +.-|+.+++++.+.++|+.
T Consensus 404 ~e~Gl~iRp~g~~i~~~PPli------------------------it~~eid~l~~~l~~al~~ 443 (449)
T COG0161 404 LERGLLIRPLGDVIYLMPPLI------------------------ITREEIDELVDALREALDE 443 (449)
T ss_pred HHCCeEEeecCCEEEEcCCcc------------------------CCHHHHHHHHHHHHHHHHH
Confidence 444544443332112223322 2235677888888888763
No 362
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.01 E-value=3.8e-08 Score=104.42 Aligned_cols=185 Identities=20% Similarity=0.236 Sum_probs=114.3
Q ss_pred HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccCH
Q 009604 226 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV 305 (531)
Q Consensus 226 ~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl 305 (531)
+|+.++.+.--+.+++|+++...|+.+...++..+...|+++..++..+..... ++ ++.+|++++|+ -.|.+.|+
T Consensus 141 Ea~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d---~~-~~a~v~vq~Pn-~~G~~ed~ 215 (429)
T PF02347_consen 141 EAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD---DD-DTAAVMVQNPN-TFGVFEDI 215 (429)
T ss_dssp HHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB----ST-TEEEEEEESS--TTSB--TH
T ss_pred HHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc---cc-CeEEEEeecCC-CCceEeeH
Confidence 455555444334456999999999999888888888899999888754211111 44 59999999998 58999999
Q ss_pred HHHHHHHHhcCCEEEEeCC--CCCCccccccccCCcEEEECCccccccC---CCceEEEEEeChHHHHHHHH--------
Q 009604 306 KLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSATKFIGGH---NDVLAGSISGSGKLVTQIRN-------- 372 (531)
Q Consensus 306 ~~I~~la~~~gi~lIvD~a--~a~~~~~~~l~~gaDivv~S~sK~lgg~---g~v~gG~iv~~~~li~~l~~-------- 372 (531)
++|.+++|++|.++++ .+ -+-.....|-++|+||++.+ +|.||.+ |+--.|++..+++++..+-.
T Consensus 216 ~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D 293 (429)
T PF02347_consen 216 KEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKD 293 (429)
T ss_dssp HHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEB
T ss_pred HHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceeccccc
Confidence 9999999999999987 55 22344577889999999887 7776521 22236888887776654421
Q ss_pred -----------------Hhh---h--cCCC--ch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 009604 373 -----------------LHH---V--LGGA--LN--PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 373 -----------------~~~---~--~G~~--~s--~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~ 417 (531)
+++ . .++. +. ....|+.+.|-+-|.+--++...++.++++.|++.
T Consensus 294 ~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 294 ADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp CCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred ccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 001 0 0000 11 12345555555666666667778999999999875
No 363
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.00 E-value=1.3e-07 Score=102.29 Aligned_cols=234 Identities=14% Similarity=0.158 Sum_probs=128.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--------cC------CCEEEEcCCCccchHHHHHhhcc-----c--CC------cEE
Q 009604 215 AESTVIMASGMSASTVMLLALV--------PA------GGHIVTTTDCYRKTRIFIETVLP-----K--MG------ITA 267 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all--------~p------GD~VIv~~~~y~~t~~~~~~~l~-----~--~G------i~v 267 (531)
.+.+.+++||++|+..+++... .. ..+||.....|++.....-..-. . +. ++.
T Consensus 110 ~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08297 110 LPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 189 (443)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCC
Confidence 3578999999999999987542 01 25788888888774322111100 0 00 100
Q ss_pred EEe--C--C-----------CCHHHHHHhccC--CCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCC
Q 009604 268 TVI--D--P-----------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA 326 (531)
Q Consensus 268 ~~v--d--~-----------~d~e~Le~al~~--~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a 326 (531)
..+ + . .+++++++.+.. +++.+|++|......|.+.+ +++|.++|++||+++|+||++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t 269 (443)
T PRK08297 190 PKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT 269 (443)
T ss_pred CCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 011 0 0 123455666642 35899999988877776642 8899999999999999999974
Q ss_pred CC-cc-----ccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHH-H--hhhcCCC--chHHHHHHHHHHHHH
Q 009604 327 TP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-L--HHVLGGA--LNPNAAYLIIRGMKT 395 (531)
Q Consensus 327 ~~-~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~-~--~~~~G~~--~s~~~a~l~l~~L~t 395 (531)
.. -. ......-.|+++ +.|.+. ++|++.++ ++.+.+.. . ....+.+ .+|..+..++..|+.
T Consensus 270 GfGRtG~~~a~~~~gv~PDiv~--~gK~l~-----~~a~l~~~-~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~ 341 (443)
T PRK08297 270 GVGLTGTAWAYQQLGVRPDIVA--FGKKTQ-----VCGIMAGR-RVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEV 341 (443)
T ss_pred ccCccchHHHHHhcCCCCCEEE--eccccc-----ccceecch-HHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHH
Confidence 32 11 112233478887 689874 25666554 32222111 1 0112222 356666655555655
Q ss_pred HHH--HHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCC
Q 009604 396 LHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 470 (531)
Q Consensus 396 l~~--r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~ 470 (531)
+.. .+++..+..+.+.+.|++... .+|.. ....+|.|.|+.|++.. .+....|...+...+
T Consensus 342 l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~---------~~~vrg~G~~~~i~~~~-~~~~~~~~~~l~~~G 404 (443)
T PRK08297 342 IEEDGLVENAARQGEYLLARLEELAA----EFPAV---------VSNVRGRGLMCAFDLPT-TADRDEVIRRLWEEG 404 (443)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHH----HCCCc---------ceeeeccceEEEEEecC-HHHHHHHHHHHHHCC
Confidence 432 233444444455555543210 11111 01224578899999963 344556776665434
No 364
>PRK06148 hypothetical protein; Provisional
Probab=98.98 E-value=1.3e-07 Score=111.66 Aligned_cols=237 Identities=14% Similarity=0.110 Sum_probs=134.5
Q ss_pred CcEEEeCChHHHHHHHHHHhc--cCCCEEEEcCCCccchHHH-HH----hhcccCC----cEEEEe--------CCC--C
Q 009604 216 ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IE----TVLPKMG----ITATVI--------DPA--D 274 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all--~pGD~VIv~~~~y~~t~~~-~~----~~l~~~G----i~v~~v--------d~~--d 274 (531)
+.+.+++||++|+.++++... ....+||+....|++.... +. ..-...+ -.+..+ +.. +
T Consensus 681 ~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 760 (1013)
T PRK06148 681 TVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPD 760 (1013)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCCh
Confidence 678899999999999987432 2235677777777764311 10 0000011 011111 111 1
Q ss_pred -------HHHHHHhcc-----CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCC----C---ccc
Q 009604 275 -------MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----P---LNQ 331 (531)
Q Consensus 275 -------~e~Le~al~-----~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~----~---~~~ 331 (531)
.+.+++.++ .+++.+|++|......|.+.+ +++|.++|+++|+++|.||++.. + +.+
T Consensus 761 ~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~ 840 (1013)
T PRK06148 761 AEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAF 840 (1013)
T ss_pred hhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhh
Confidence 134555443 124899999998877777765 89999999999999999999642 1 112
Q ss_pred cccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHHHHHHHHHHHHHHHH--HHHHHHHH
Q 009604 332 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTLHLR--VQQQNSTA 407 (531)
Q Consensus 332 ~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~L~tl~~r--~~~~~~na 407 (531)
.....-.||++ +.|.+++. ...|++++++++.+.+.... .++.+ -+|..+..++..|+.+... +++..+.-
T Consensus 841 e~~gv~PDivt--~gK~lggG--~Plgav~~~~ei~~~~~~g~-~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G 915 (1013)
T PRK06148 841 ETQGVVPDIVT--MGKPIGNG--HPMGAVVTTREIADSFDNGM-EYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIG 915 (1013)
T ss_pred hhcCCCcceee--ecccccCC--cceEEEEEcHHHHhhccCCC-ccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 22233478877 68999864 34677888888887664311 12222 3566666666666655321 22222333
Q ss_pred HHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcCCCCc
Q 009604 408 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPYI 471 (531)
Q Consensus 408 ~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-------~~~~~~fl~~L~~~~i 471 (531)
.+|.+.|++... .+|. -...+|.|.++.+++..+ .+....+++.+...++
T Consensus 916 ~~l~~~L~~l~~----~~~~----------i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gv 972 (1013)
T PRK06148 916 NYLLAGLRELQD----RFDI----------IGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGI 972 (1013)
T ss_pred HHHHHHHHHHHH----hCCC----------ceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCe
Confidence 334444432100 1111 012356788999998532 1234566666654443
No 365
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.93 E-value=2e-07 Score=93.66 Aligned_cols=237 Identities=19% Similarity=0.206 Sum_probs=145.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc------c--CCC--EEEEcCCCccc-hHH---------HHHhhcccCCcEEEEeCCC
Q 009604 214 GAESTVIMASGMSASTVMLLALV------P--AGG--HIVTTTDCYRK-TRI---------FIETVLPKMGITATVIDPA 273 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all------~--pGD--~VIv~~~~y~~-t~~---------~~~~~l~~~Gi~v~~vd~~ 273 (531)
|.+.++-+++|.+|...++.-.- + |.| .|+.....|++ |.. .++.+-+...-.+..++-.
T Consensus 115 ~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~ 194 (427)
T KOG1402|consen 115 GYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG 194 (427)
T ss_pred CcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC
Confidence 56778889999999999886321 2 323 34444444443 211 1111111111225566778
Q ss_pred CHHHHHHhccCCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC------ccccccccCCcEEEE
Q 009604 274 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLGADLVLH 343 (531)
Q Consensus 274 d~e~Le~al~~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~------~~~~~l~~gaDivv~ 343 (531)
|.++|+.++++.+.+.+++|.....-|.++| ++++.++|.+|++++|.||++..- +..+....-.|+++
T Consensus 195 d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivi- 273 (427)
T KOG1402|consen 195 DAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVI- 273 (427)
T ss_pred CHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEE-
Confidence 9999999998877999999999999999876 889999999999999999997431 12233334578888
Q ss_pred CCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cC
Q 009604 344 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE----AH 417 (531)
Q Consensus 344 S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~----~~ 417 (531)
+-|.++|.---..+ +..+++++-.++... .|++ -+|..+..+...|+.+.+ ++..+++..|-+.|. +.
T Consensus 274 -lgKalSGG~~Pvsa-vl~~~~im~~~~pge--HgsTyggNpLg~~vaiAalevi~e--ekL~era~~lG~~l~~~L~~l 347 (427)
T KOG1402|consen 274 -LGKALSGGVYPVSA-VLADDDIMLNIKPGE--HGSTYGGNPLGCAVAIAALEVIVE--EKLVERAAKLGEILRDQLNKL 347 (427)
T ss_pred -EeccccCCeeeeEE-EEecHHHHhccCCCc--cccccCCChHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhc
Confidence 67999865433333 445666665554332 2322 246666666666666543 455566666655443 33
Q ss_pred CCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCCC
Q 009604 418 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPY 470 (531)
Q Consensus 418 p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~---~~~~~~fl~~L~~~~ 470 (531)
+. ..|. .-+..+|.|-+..+++... ..++...+-.|+..+
T Consensus 348 ~~----~~p~---------~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g 390 (427)
T KOG1402|consen 348 QK----KFPH---------VVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENG 390 (427)
T ss_pred cc----cccc---------hhheeeccceEEEEEeccccccchhHHHHHHcccccc
Confidence 21 1121 1233467777888888632 245555555565533
No 366
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.93 E-value=5e-08 Score=103.35 Aligned_cols=227 Identities=19% Similarity=0.137 Sum_probs=140.1
Q ss_pred ccCCCcc-cCCHHHHHHHHhhccCCCccCCCCCCCCC----------CCCcEEEeCChHHHHHHHHHHhcc-CCCEEEEc
Q 009604 178 VNTSAYF-FKKTAELIDFKEKRRASFEYGRYGNPTTV----------GAESTVIMASGMSASTVMLLALVP-AGGHIVTT 245 (531)
Q Consensus 178 ~~sst~~-f~~~~~~~~~~~~~~~~~~Y~R~gnPt~~----------g~e~~i~~sSG~~Ai~~al~all~-pGD~VIv~ 245 (531)
.+|.|.+ -++.++..+... ++..|+ |.||.. |.+.++.+.+|..+..+++..+++ |||++++.
T Consensus 46 LrSDTgT~apS~~m~aAM~~---GDD~Y~--gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~ 120 (467)
T TIGR02617 46 LLTDSGTGAVTQSMQAAMMR---GDEAYS--GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLD 120 (467)
T ss_pred CccCCCCCCCCHHHHHHHHc---CCcccc--cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhccccccccccc
Confidence 4667776 377777666554 344565 888876 899999999999999999998888 78877754
Q ss_pred CC-------Cccc-hHHHHHhhcccCCcEEEEe--------------C-CCCHHHHHHhccC---CCcEEEEEeCCCCC-
Q 009604 246 TD-------CYRK-TRIFIETVLPKMGITATVI--------------D-PADMEGLEAALNN---NNVSLFFTESPTNP- 298 (531)
Q Consensus 246 ~~-------~y~~-t~~~~~~~l~~~Gi~v~~v--------------d-~~d~e~Le~al~~---~~tklV~lesP~NP- 298 (531)
.. .|.. +.. .....|+.+..+ + ..|+++|+++|++ .+.-.+.++-.+|-
T Consensus 121 ~~~~~v~hn~~fett~g----~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~ 196 (467)
T TIGR02617 121 RSKMVAFSNYFFDTTQG----HSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSA 196 (467)
T ss_pred ccccccceEEEEecchH----HHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecC
Confidence 42 2222 111 112224433321 1 2389999999974 22334444333454
Q ss_pred CCcccC---HHHHHHHHHhcCCEEEEeCC--C--CC----------Ccccccc----ccCCcEEEECCccccccCCCceE
Q 009604 299 FLRCVD---VKLVSDLCHKKGAIVCIDGT--F--AT----------PLNQKAL----SLGADLVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 299 tG~v~d---l~~I~~la~~~gi~lIvD~a--~--a~----------~~~~~~l----~~gaDivv~S~sK~lgg~g~v~g 357 (531)
-|.+++ ++++.++|++||+++++|.+ + +. ......+ ...+|.+..|++|-++.+ +|
T Consensus 197 GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgAp---vG 273 (467)
T TIGR02617 197 GGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVP---MG 273 (467)
T ss_pred CCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCc---cc
Confidence 366666 56888899999999999997 2 11 1111111 145899999999998866 48
Q ss_pred EEEEeChH----HHHHHHHHh------hhcCCCchHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHcC
Q 009604 358 GSISGSGK----LVTQIRNLH------HVLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 358 G~iv~~~~----li~~l~~~~------~~~G~~~s~~~a~l~l~~L~tl--~~r~~~~~~na~~La~~L~~~ 417 (531)
|+++++++ +.++++... ..+| .++.-+...+..||+.. ...++......++|.+.|.+.
T Consensus 274 g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYG-Glagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~ 344 (467)
T TIGR02617 274 GLLCFKDDSFFDVYTECRTLCVVQEGFPTYG-GLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEI 344 (467)
T ss_pred ceEEecchhHHHHHHHHHhhcccccCCcCcC-chhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhC
Confidence 89998764 334444322 1233 34444433334455432 233444556678888888765
No 367
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.89 E-value=3.9e-07 Score=104.58 Aligned_cols=158 Identities=16% Similarity=0.224 Sum_probs=97.6
Q ss_pred HHHHHhcc-------CCCcEEEEEeCC-CCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCCc------cccccccC
Q 009604 276 EGLEAALN-------NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL------NQKALSLG 337 (531)
Q Consensus 276 e~Le~al~-------~~~tklV~lesP-~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~~------~~~~l~~g 337 (531)
+.+++.|. .+++.+|++|.. ..-.|.+.+ +++|.++|++||+++|.||++.... .......-
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~ 646 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCK 646 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCC
Confidence 44666654 235899999985 565666653 7899999999999999999965321 12223334
Q ss_pred CcEEEECCccccccCCCceEEEEEeChHHHHHHHHH----hhhcCC--CchHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 009604 338 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLGG--ALNPNAAYLIIRGMKTLHLR--VQQQNSTALR 409 (531)
Q Consensus 338 aDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~----~~~~G~--~~s~~~a~l~l~~L~tl~~r--~~~~~~na~~ 409 (531)
.||++ +.|.++|.- +..|++++++++.+.+..- ....|. +.+|..+..++..|+.+... .+...++.+.
T Consensus 647 PDIi~--~gKgLtgG~-~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~ 723 (817)
T PLN02974 647 PDIAC--YAKLLTGGL-VPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSR 723 (817)
T ss_pred CCEEe--ecccccCCC-CccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 78888 679998642 3467777888888776421 011232 34577777776677665431 1222233333
Q ss_pred HHH--------HHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC
Q 009604 410 MAK--------ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 454 (531)
Q Consensus 410 La~--------~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g 454 (531)
+.+ .|.++|.|..| +|.|.|+.+++..
T Consensus 724 l~~~l~~~l~~~l~~~p~V~~V------------------Rg~Gl~~~iel~~ 758 (817)
T PLN02974 724 LRELWDEELVRAISSLPNVERV------------------VSLGTVLALELDA 758 (817)
T ss_pred HHHHHHHHHHHHHhhCCCeeEE------------------EeeeeEEEEEEec
Confidence 322 23344544433 4568899999963
No 368
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.89 E-value=1.3e-07 Score=101.88 Aligned_cols=195 Identities=16% Similarity=0.195 Sum_probs=112.4
Q ss_pred CcEEEeCChHHHHHHHHHHhc-cCCC-EEEEc-CCCccchHHHHHhh-cccCCc------EEEEeCCCCHHHHHHhccC-
Q 009604 216 ESTVIMASGMSASTVMLLALV-PAGG-HIVTT-TDCYRKTRIFIETV-LPKMGI------TATVIDPADMEGLEAALNN- 284 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all-~pGD-~VIv~-~~~y~~t~~~~~~~-l~~~Gi------~v~~vd~~d~e~Le~al~~- 284 (531)
+.+.+++||++|+..+++... -.|. +|+.. ...|.+....+... ....+. .+..++..|+++|+++++.
T Consensus 105 ~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 184 (431)
T PRK06209 105 DMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYNDIASLEALFEDH 184 (431)
T ss_pred ceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCCCCHHHHHHHHHhC
Confidence 568899999999999987432 1343 45543 23333211111000 000111 1223456689999988852
Q ss_pred -CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccc------cccccCCcEEEECCccccccCCCceE
Q 009604 285 -NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSLGADLVLHSATKFIGGHNDVLA 357 (531)
Q Consensus 285 -~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~------~~l~~gaDivv~S~sK~lgg~g~v~g 357 (531)
+++.+|++|......+..-.+++|.++|++||+++|+||++ +++.. .......|+++ +.|.+++. ..+
T Consensus 185 ~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t--~gK~lggG--~p~ 259 (431)
T PRK06209 185 PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSC--FGKALGNG--FAV 259 (431)
T ss_pred CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceee--ehhhhcCC--ccc
Confidence 24789999887644222334899999999999999999986 33211 11223357644 78999863 347
Q ss_pred EEEEeChHHHHH--HHHH--hh--hcCCCc--hHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Q 009604 358 GSISGSGKLVTQ--IRNL--HH--VLGGAL--NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE 415 (531)
Q Consensus 358 G~iv~~~~li~~--l~~~--~~--~~G~~~--s~~~a~l~l~~L~tl~~--r~~~~~~na~~La~~L~ 415 (531)
|++++++++++. +... .. .++.+. +|..+..++..|+.+.. .+++..+..+++.+.|+
T Consensus 260 ~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~ 327 (431)
T PRK06209 260 SALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVN 327 (431)
T ss_pred EEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 888888887765 2111 11 134343 34556655566665532 23444444555555554
No 369
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.87 E-value=3.2e-07 Score=94.84 Aligned_cols=198 Identities=18% Similarity=0.212 Sum_probs=129.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccC------CC--EEEEcCCCccc-hHHHHHh-hcccCCc-------EEEEeCCCCHH
Q 009604 214 GAESTVIMASGMSASTVMLLALVPA------GG--HIVTTTDCYRK-TRIFIET-VLPKMGI-------TATVIDPADME 276 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~p------GD--~VIv~~~~y~~-t~~~~~~-~l~~~Gi-------~v~~vd~~d~e 276 (531)
..+.+.++.||++|+..+|....+- -+ .+|.-..+|++ +...+.. .-..++. .+.+...+|..
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t 194 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDST 194 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHH
Confidence 4678999999999999998754321 12 37777777765 4433321 1122232 23344456899
Q ss_pred HHHHhccCCC--cEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC------ccccccccCCcEEEEC
Q 009604 277 GLEAALNNNN--VSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLGADLVLHS 344 (531)
Q Consensus 277 ~Le~al~~~~--tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~------~~~~~l~~gaDivv~S 344 (531)
++++.+..++ +.+|++|.....-|.++. +..|.++|+++|+++|.||++... +.+..+..-.||.+
T Consensus 195 ~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t-- 272 (433)
T KOG1401|consen 195 ALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITT-- 272 (433)
T ss_pred HHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCccee--
Confidence 9999987653 789999999877676643 678999999999999999997532 12333334467765
Q ss_pred CccccccCCCceEEEEEeChHHHHHHHHHhh-hcCCCc--hHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Q 009604 345 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGAL--NPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILE 415 (531)
Q Consensus 345 ~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~-~~G~~~--s~~~a~l~l~~L~tl~--~r~~~~~~na~~La~~L~ 415 (531)
+.|.++|. +..|+..+++++.+.+..-.. ..|.+. +|+.+......|+++. ..+++..+.-+.|.+.|.
T Consensus 273 ~aK~L~gG--lPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~ 346 (433)
T KOG1401|consen 273 VAKPLGGG--LPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLD 346 (433)
T ss_pred ehhhccCC--ceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 78999875 568888889888888764222 234333 4666666666666652 334444444455555444
No 370
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.85 E-value=7.4e-07 Score=91.95 Aligned_cols=271 Identities=14% Similarity=0.115 Sum_probs=137.2
Q ss_pred CCCcEEEeCChH-HHHHHHH-HH----hcc---C-----CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----CCH
Q 009604 214 GAESTVIMASGM-SASTVML-LA----LVP---A-----GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADM 275 (531)
Q Consensus 214 g~e~~i~~sSG~-~Ai~~al-~a----ll~---p-----GD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~d~ 275 (531)
..+++|+.+|-+ .-+.-++ .+ +.. | .-+.+++.|.|..-+ .+++.+|++...|+. .|+
T Consensus 85 ~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHF----ai~E~~Giemi~VpM~~dGPDm 160 (425)
T PF12897_consen 85 PPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHF----AITEHFGIEMIPVPMTEDGPDM 160 (425)
T ss_dssp -GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHH----HHHHHCT-EEEEEEEETTEE-H
T ss_pred CHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHH----HHHHhhCcEEEecCCCCCCCCH
Confidence 467788877776 3333222 12 211 1 126899999997755 345678999888864 389
Q ss_pred HHHHHhccC-CCcEEEEE-eCCCCCCCcccCHHHHHHHHH----hcCCEEEEeCCCCCCccc---------ccc----cc
Q 009604 276 EGLEAALNN-NNVSLFFT-ESPTNPFLRCVDVKLVSDLCH----KKGAIVCIDGTFATPLNQ---------KAL----SL 336 (531)
Q Consensus 276 e~Le~al~~-~~tklV~l-esP~NPtG~v~dl~~I~~la~----~~gi~lIvD~a~a~~~~~---------~~l----~~ 336 (531)
|.+++++.+ ..+|.||+ ..-+||+|.++.-+-+.+++. ..+..++-||+|+..... +.+ +.
T Consensus 161 D~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~A 240 (425)
T PF12897_consen 161 DMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKA 240 (425)
T ss_dssp HHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHT
T ss_pred HHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHc
Confidence 999999843 34888886 233699999998777777763 568999999998754331 111 11
Q ss_pred C---CcEEEECCccccccCCCceEEEEEeChHHHHHHHHHhhhcCCCch---HHHHHHHHHHHH-HHHHHHHHHHHH---
Q 009604 337 G---ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN---PNAAYLIIRGMK-TLHLRVQQQNST--- 406 (531)
Q Consensus 337 g---aDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~~~~G~~~s---~~~a~l~l~~L~-tl~~r~~~~~~n--- 406 (531)
| .-++..|+||.--+.++ .+++.++++-++.+++.......... .+.-...++..+ .+...|++|.+.
T Consensus 241 Gnpdrv~~F~STSKITf~GaG--va~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~P 318 (425)
T PF12897_consen 241 GNPDRVYVFASTSKITFPGAG--VAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRP 318 (425)
T ss_dssp T-TTSEEEEEESTTTS-TTSS---EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccccccCCcc--eeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhh
Confidence 2 23788899997544443 57888888777776654443332222 222222223333 444555555432
Q ss_pred -HHHHHHHHHcC----CCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCcccc
Q 009604 407 -ALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 481 (531)
Q Consensus 407 -a~~La~~L~~~----p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~~Sl 481 (531)
.+.+.+.|+++ .++..+..|. .|.+|+|++..+ .+.+.++..+..|+.....|.
T Consensus 319 KF~~V~~~L~~~L~~~~~ia~Wt~P~----------------GGYFIsld~~~G--~AkrvV~lakeAGV~LT~AGA--- 377 (425)
T PF12897_consen 319 KFEAVLEILEEELGDGLGIASWTKPK----------------GGYFISLDVLDG--TAKRVVELAKEAGVALTPAGA--- 377 (425)
T ss_dssp HHHHHHHHHHHHHGTGGTSEEE---S----------------BSS-EEEEESTT---HHHHHHHHHHTTEE---TTT---
T ss_pred hHHHHHHHHHHhcCCCCCeeEecCCC----------------CceEEEEecCCC--hHHHHHHHHHHhCceeCCCCC---
Confidence 23333444332 2455555554 578999998754 456666666666655443222
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009604 482 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 525 (531)
Q Consensus 482 i~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvGlE~~edli~dL~ 525 (531)
.+|... .-.+.-|||.-.+...+++-..++
T Consensus 378 -tfPyg~-------------DP~D~nIRiAPS~P~leel~~Am~ 407 (425)
T PF12897_consen 378 -TFPYGK-------------DPRDSNIRIAPSYPSLEELETAMD 407 (425)
T ss_dssp -TSGGG---------------TTS-EEEE--SSS-HHHHHHHHH
T ss_pred -CCCCCC-------------CCCCCcEEecCCCCCHHHHHHHHH
Confidence 122111 112678999999998877766554
No 371
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.83 E-value=3e-07 Score=93.58 Aligned_cols=191 Identities=19% Similarity=0.175 Sum_probs=120.6
Q ss_pred EeCChHHHHHHHHHHhccCCCEEEEcCCCccch--HHHHHhhcccCCcEEEEe-------CC----CCHHHHHHhccCCC
Q 009604 220 IMASGMSASTVMLLALVPAGGHIVTTTDCYRKT--RIFIETVLPKMGITATVI-------DP----ADMEGLEAALNNNN 286 (531)
Q Consensus 220 ~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t--~~~~~~~l~~~Gi~v~~v-------d~----~d~e~Le~al~~~~ 286 (531)
-.=||+-|+..+..++++|+|+|.--+.-+++- +.+... -++....-.++ |+ .|.|.||+....-+
T Consensus 111 Qp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~-~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~fr 189 (477)
T KOG2467|consen 111 QPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTP-TKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFR 189 (477)
T ss_pred ccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccC-CceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcC
Confidence 345899999999999999999987655544442 111101 11111111222 21 37888887766556
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-----ccccccccCCcEEEECCccccccCCCceEEEEE
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-----~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv 361 (531)
+|+|+.-. +-.-+.+|.+++.++|.+.|+.|+.|-++-++ ...+|.++ +|||..+.||.+-|+. ||+|.
T Consensus 190 Pk~iiaG~--SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTTTTHKsLRGPR---g~mIF 263 (477)
T KOG2467|consen 190 PKLIIAGT--SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-CDIVTTTTHKSLRGPR---GAMIF 263 (477)
T ss_pred CcEEEecc--ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-cceeeccccccccCCc---ceeEE
Confidence 78887633 33567889999999999999999999996543 44677777 9999999999999885 67776
Q ss_pred eCh---------------HHHHHHHHH--hhhcCCCch-HHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcC
Q 009604 362 GSG---------------KLVTQIRNL--HHVLGGALN-PNAA-YLIIRGM--KTLHLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 362 ~~~---------------~li~~l~~~--~~~~G~~~s-~~~a-~l~l~~L--~tl~~r~~~~~~na~~La~~L~~~ 417 (531)
-++ ++-+++... -...|+--+ ...+ +.+++.. ..+.+..++..+|++.|++.|.++
T Consensus 264 yRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~ 340 (477)
T KOG2467|consen 264 YRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR 340 (477)
T ss_pred EeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 432 122233221 112222111 1111 1122222 234555677789999999999875
No 372
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.77 E-value=6.3e-07 Score=92.11 Aligned_cols=244 Identities=18% Similarity=0.196 Sum_probs=141.3
Q ss_pred CcEEEeCChHHHHHHHHHHh-ccCC-CEEEEcCCCccchHHHHHhh--cc--cC---Cc--EEEEe-CCC--------C-
Q 009604 216 ESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKTRIFIETV--LP--KM---GI--TATVI-DPA--------D- 274 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al-l~pG-D~VIv~~~~y~~t~~~~~~~--l~--~~---Gi--~v~~v-d~~--------d- 274 (531)
..++|++||++|+.++++.. +-.| -+||.-+..|++.....-.+ +. ++ +. -+... .++ +
T Consensus 110 ~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~ 189 (442)
T KOG1404|consen 110 KVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSN 189 (442)
T ss_pred eEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCc
Confidence 45888999999999988643 2222 26777777777643211000 11 11 01 00011 110 1
Q ss_pred --------HHHHHHhcc---CCCcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----ccccccc
Q 009604 275 --------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----LNQKALS 335 (531)
Q Consensus 275 --------~e~Le~al~---~~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~----~~~~~l~ 335 (531)
.+++++.+. +.++.+.+.|+....-|.+.. +++..++|+++|.++|.||++... .......
T Consensus 190 ~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~ 269 (442)
T KOG1404|consen 190 EEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFES 269 (442)
T ss_pred hhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccc
Confidence 244454442 334788889999987787764 889999999999999999996432 1111122
Q ss_pred cC--CcEEEECCccccccCCCceEEEEEeChHHHHHHHHHh---hhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009604 336 LG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 410 (531)
Q Consensus 336 ~g--aDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~~---~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~L 410 (531)
+| .||+ ++.|.+|.. ...|+++..+|+.+.+.+.. +.+| -+|..+...+.-|+-+.+ +++++|+..+
T Consensus 270 h~v~PDIv--TmAKgiGnG--~Pl~AVvtt~EIa~v~~~~~~~fnTyg--gnP~a~avg~aVL~Vike--e~LqE~aa~v 341 (442)
T KOG1404|consen 270 HGVVPDIV--TMAKGIGNG--FPLGAVVTTPEIADVLNQKSSHFNTYG--GNPVACAVGLAVLKVIKE--ENLQENAAEV 341 (442)
T ss_pred cCCCccHH--HHHhhccCC--CcceeeecCHHHHHHHHhccccccccC--CCchhHHHHHHHHHHHHH--HhHHHHHHHH
Confidence 23 4554 589999865 34677778888887776533 2233 346666666656665543 5566777777
Q ss_pred HHHHHcCC-CceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCH--------HHHHHHHHHcCCCCcccccCCc
Q 009604 411 AKILEAHP-KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--------TATIKFIDALKIPYIAPSFGGC 478 (531)
Q Consensus 411 a~~L~~~p-~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~--------~~~~~fl~~L~~~~iavS~Gg~ 478 (531)
..+|.+.- .+ +-.+|-. .+.+|.|-|+.+|+-.+. .....+.+.++..++-+.-|+.
T Consensus 342 G~yl~~~l~~l-~d~h~iI----------GdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i 407 (442)
T KOG1404|consen 342 GSYLLEKLAAL-KDKHPII----------GDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGI 407 (442)
T ss_pred HHHHHHHHHHH-hhcCCce----------eecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccc
Confidence 76665320 00 0011111 122567889999985321 2344566667666666655543
No 373
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.75 E-value=9.3e-06 Score=90.50 Aligned_cols=170 Identities=12% Similarity=0.032 Sum_probs=109.7
Q ss_pred EEEEcCCCccchHHHHHhhcccCCc---EEEEeCC-----CCHHHHHHhccC----C-CcEEEEEeCCCCCCCcccCHHH
Q 009604 241 HIVTTTDCYRKTRIFIETVLPKMGI---TATVIDP-----ADMEGLEAALNN----N-NVSLFFTESPTNPFLRCVDVKL 307 (531)
Q Consensus 241 ~VIv~~~~y~~t~~~~~~~l~~~Gi---~v~~vd~-----~d~e~Le~al~~----~-~tklV~lesP~NPtG~v~dl~~ 307 (531)
.|+++...|.+.... +...|+ .++.++. .|+++|++.|++ . .+-+|+....+-.+|.+=|+++
T Consensus 224 ~vl~s~~aHyS~~KA----a~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~e 299 (608)
T TIGR03811 224 KWLVPQTKHYSWLKA----ADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDK 299 (608)
T ss_pred EEEECCCccHHHHHH----HHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHH
Confidence 477777777775533 333444 2444442 388899888752 1 2445666777788999999999
Q ss_pred HHHHH---HhcCC--EEEEeCCCCCCc---ccc-------------------------------------ccccCCcEEE
Q 009604 308 VSDLC---HKKGA--IVCIDGTFATPL---NQK-------------------------------------ALSLGADLVL 342 (531)
Q Consensus 308 I~~la---~~~gi--~lIvD~a~a~~~---~~~-------------------------------------~l~~gaDivv 342 (531)
|+++| +++|+ +++||.+|+... ..+ .+ ..+|-+.
T Consensus 300 I~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gl-e~ADSIt 378 (608)
T TIGR03811 300 IVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAI-SEAESVT 378 (608)
T ss_pred HHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcC-cCceEEE
Confidence 99998 66887 699999988632 111 01 2589999
Q ss_pred ECCccccccCCCceEEEEEe-ChHHHHHHHH---Hhh--------------hcCCCch--HHHHHHHHHHH----HHHHH
Q 009604 343 HSATKFIGGHNDVLAGSISG-SGKLVTQIRN---LHH--------------VLGGALN--PNAAYLIIRGM----KTLHL 398 (531)
Q Consensus 343 ~S~sK~lgg~g~v~gG~iv~-~~~li~~l~~---~~~--------------~~G~~~s--~~~a~l~l~~L----~tl~~ 398 (531)
..+||++.-+-+ .|+++. ++.+.+.+.. +.. ..|...+ ....|+.++.+ +.+..
T Consensus 379 vDpHK~g~~Py~--~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~ 456 (608)
T TIGR03811 379 IDPHKMGYIPYS--AGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGK 456 (608)
T ss_pred eCcccccccCCC--eEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999876543 455544 4444333321 110 1122222 45567666544 46677
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 009604 399 RVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 399 r~~~~~~na~~La~~L~~~ 417 (531)
.+++..++++++++.|+++
T Consensus 457 ~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 457 LIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 8888889999999999874
No 374
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.73 E-value=3.6e-06 Score=88.36 Aligned_cols=224 Identities=12% Similarity=0.028 Sum_probs=132.6
Q ss_pred EEEe-CChHHHHHHHHHHhccCCCEEE-EcCCCccchHHHHHhhcccCCcEEEEeC---------CCCHHHHHHhccCCC
Q 009604 218 TVIM-ASGMSASTVMLLALVPAGGHIV-TTTDCYRKTRIFIETVLPKMGITATVID---------PADMEGLEAALNNNN 286 (531)
Q Consensus 218 ~i~~-sSG~~Ai~~al~all~pGD~VI-v~~~~y~~t~~~~~~~l~~~Gi~v~~vd---------~~d~e~Le~al~~~~ 286 (531)
++++ ++|+.++.++...++.+||+++ +....+.+.+ +. ..++++| ++..+. ..+++++ .+.+ +
T Consensus 70 Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r-~~-~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~-d 143 (364)
T PRK12462 70 VVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRK-AI-GEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDA-R 143 (364)
T ss_pred EEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHH-HH-HHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCC-C
Confidence 5444 4577999999999999999654 4434444433 23 3445555 333332 1134444 2333 3
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEEEEeChH
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 365 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~ 365 (531)
.+.|++++-.-.+|...+ ++.+.+++++|+|.+-..+ .+.+..++ |+++.+..|.+|++| .++++.+++
T Consensus 144 ~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~--dvi~agsQKnlgP~G---ltvvivs~~ 213 (364)
T PRK12462 144 APFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY--GMVYAHAQKNLGPAG---VTVAIIRRA 213 (364)
T ss_pred CcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHHc--cEEEeeccccCCCCc---eEEEEECHH
Confidence 677877555556788775 3333468999999984332 12233333 999999999999776 567888887
Q ss_pred HHHHHHHH-------h---h--hcCCCchHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHcCCCceEEeCC
Q 009604 366 LVTQIRNL-------H---H--VLGGALNPNAAYLIIRGMKTL-------HLRVQQQNSTALRMAKILEAHPKVKRVHYP 426 (531)
Q Consensus 366 li~~l~~~-------~---~--~~G~~~s~~~a~l~l~~L~tl-------~~r~~~~~~na~~La~~L~~~p~v~~V~~p 426 (531)
.+++.... . . ..-.+++.+..|.+...++.+ ..+.+++.+.++.+.+++++.++. |+
T Consensus 214 al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~----~~ 289 (364)
T PRK12462 214 LLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEV----ID 289 (364)
T ss_pred HHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCc----cc
Confidence 77654321 0 0 111244455555554444443 345567778888899999887542 22
Q ss_pred CCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCc
Q 009604 427 GLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 471 (531)
Q Consensus 427 gl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~i 471 (531)
.. ..+.+ + .--.+.|.+. +.+...+|++..+..++
T Consensus 290 ~~-~~~~~---R-----S~mnv~f~~~-~~~l~~~f~~~a~~~gl 324 (364)
T PRK12462 290 CH-AHRAA---R-----STMNVAFRFR-QPRLDTLFKEQSTEAGF 324 (364)
T ss_pred CC-CChhh---c-----CcceEEEEcC-CHHHHHHHHHHHHHCCC
Confidence 21 11111 1 1235777775 44567889988876553
No 375
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.71 E-value=2.7e-06 Score=97.72 Aligned_cols=133 Identities=17% Similarity=0.224 Sum_probs=97.3
Q ss_pred HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccCH
Q 009604 226 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV 305 (531)
Q Consensus 226 ~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl 305 (531)
+|+.++.+.--+...+|+++...|+.+...++..+...|+++.. +++++.+++ ++..|++.+|+ -.|.+.|+
T Consensus 155 EA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~~~~~~~~-~~~~v~vq~P~-~~G~i~d~ 226 (954)
T PRK12566 155 EAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DAVDNLAAH-AVFGALLQYPD-THGEIRDL 226 (954)
T ss_pred HHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cchhhcCCC-CEEEEEEECCC-CceEEccH
Confidence 44444443221224689999999999999998889999999875 345556655 48999999997 68999999
Q ss_pred HHHHHHHHhcCCEEEEeCC--CCCCccccccccCCcEEEECCcc-----ccccCCCceEEEEEeChHHHHHH
Q 009604 306 KLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSATK-----FIGGHNDVLAGSISGSGKLVTQI 370 (531)
Q Consensus 306 ~~I~~la~~~gi~lIvD~a--~a~~~~~~~l~~gaDivv~S~sK-----~lgg~g~v~gG~iv~~~~li~~l 370 (531)
++|.+++|++|+++++ .+ .+-.+...|-++|+||++.+..- .|||+. +|++..++++..++
T Consensus 227 ~~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~---ag~~a~~~~~~R~~ 294 (954)
T PRK12566 227 RPLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGPH---AAYFACRDDYKRAM 294 (954)
T ss_pred HHHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCCC---eeeeeehHHHHhhC
Confidence 9999999999998663 33 22335567889999999886542 345554 78888877665543
No 376
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.60 E-value=1.2e-06 Score=89.26 Aligned_cols=279 Identities=13% Similarity=0.128 Sum_probs=132.2
Q ss_pred CCCCCCCCCCcEEEeCChH-HHHHHHHHHhccC--C----CEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHH
Q 009604 207 YGNPTTVGAESTVIMASGM-SASTVMLLALVPA--G----GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 279 (531)
Q Consensus 207 ~gnPt~~g~e~~i~~sSG~-~Ai~~al~all~p--G----D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le 279 (531)
.||.. -...-|++++|+ +.+++++.+|... . -.|+...|.|.... .....++....+.. -|... +.
T Consensus 59 VGNAv--t~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~-~qt~~f~s~~y~w~-Gda~~---~~ 131 (363)
T PF04864_consen 59 VGNAV--TDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYP-EQTDFFDSRLYKWA-GDASN---FK 131 (363)
T ss_dssp H-SB----TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHH-HHCCCT-BTTEEEE-EECCC---GT
T ss_pred hcccc--ccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchH-HHHHhccccCcccc-ccHHh---hc
Confidence 35543 235678888887 8888888887543 1 26888888886533 22233433222211 12111 11
Q ss_pred HhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccc-ccccCCcEEEECCccccccCCCceEE
Q 009604 280 AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-ALSLGADLVLHSATKFIGGHNDVLAG 358 (531)
Q Consensus 280 ~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-~l~~gaDivv~S~sK~lgg~g~v~gG 358 (531)
..-+. .+-+=++++||||.|.+- +. +++.-+..+|.|-+|.-|.... +....-||.++++||.-|-.|.++|.
T Consensus 132 ~~~~~-~~~IElVTSPNNPDG~lr--~~---V~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT~SK~TGHAGSR~GW 205 (363)
T PF04864_consen 132 NSDNP-SPYIELVTSPNNPDGQLR--EA---VLNGSSGKVIHDLAYYWPHYTPITAPADHDIMLFTLSKLTGHAGSRFGW 205 (363)
T ss_dssp T-S-C-CGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SEEEEEHHHHCS-GGG-EEE
T ss_pred cCCCC-CCeEEEEeCCCCCccccc--ch---hcCCCCcceeeeeeeecccccccCCCCCCceEEEEEecccCccccccce
Confidence 11111 255667899999999863 12 2355567889999977653311 12234689999999986644555555
Q ss_pred EEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHcCCCceEEe
Q 009604 359 SISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--------------RVQQQNSTALRMAKILEAHPKVKRVH 424 (531)
Q Consensus 359 ~iv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~--------------r~~~~~~na~~La~~L~~~p~v~~V~ 424 (531)
+++-++++.++|..+........+-.....+++-|+.+-. -.+...+.-++|.+.+.... +..
T Consensus 206 AlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~---rFS 282 (363)
T PF04864_consen 206 ALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASK---RFS 282 (363)
T ss_dssp EEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSS---SEE
T ss_pred eeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcC---cee
Confidence 5666667778887655443333333322222222222111 01122233345555554432 223
Q ss_pred CCCCCCCchh-hhhhhhcCCcccEEEEEEcC-CHHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcC
Q 009604 425 YPGLKSHPEH-HIATQQMTGFGGVVSFEVDG-DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 502 (531)
Q Consensus 425 ~pgl~s~p~~-~l~~~~~~g~g~ivsf~l~g-~~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~g 502 (531)
+|.++ |+| ...++...-.+...++..+. ..+++..++.+.++++ .-|. ..|
T Consensus 283 Lq~~~--~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~t---r~G~----------------------~fg 335 (363)
T PF04864_consen 283 LQKFS--PQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIIT---RSGV----------------------LFG 335 (363)
T ss_dssp E---S--CEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEE---EEGG----------------------GGT
T ss_pred cCcCC--chhccccccccCCCCCeEEEecCCcccccHHHHHHhCCccc---CCCC----------------------ccC
Confidence 33332 222 12222223457788888863 2357888888665543 2221 145
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 503 IMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 503 i~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
.+..++|||+- +.+|..+.|.+-|.+
T Consensus 336 a~~ryVRlSml--~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 336 ADSRYVRLSML--KRDDDFDQLLERLSK 361 (363)
T ss_dssp S-TTEEEEESS--S-HHHHHHHHHHHHC
T ss_pred CCCCeEEEecc--CCHHHHHHHHHHHHh
Confidence 56789999974 455555555555543
No 377
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.53 E-value=1.4e-05 Score=82.59 Aligned_cols=231 Identities=15% Similarity=0.134 Sum_probs=136.2
Q ss_pred cEEEeCChHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC---C----CCHHHHHHhccCC-C
Q 009604 217 STVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID---P----ADMEGLEAALNNN-N 286 (531)
Q Consensus 217 ~~i~~sSG~~Ai~~al~al--l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd---~----~d~e~Le~al~~~-~ 286 (531)
..+-+.+|+.|+..+..-+ ..+...|.+++|+++....++ ...|.++..++ . .|.+.+.+.|+.- +
T Consensus 96 ~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If----~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~ 171 (396)
T COG1448 96 ATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIF----EAAGLEVETYPYYDAETKGLDFDGMLADLKTAPE 171 (396)
T ss_pred hheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHH----HhcCCceeeeeccccccccccHHHHHHHHHhCCC
Confidence 4567889999988876544 456677999999998765444 44577765543 2 2666666666432 1
Q ss_pred cEEEEE-eCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCC---CCCcccccc------ccCC-cEEEECCccccccC
Q 009604 287 VSLFFT-ESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTF---ATPLNQKAL------SLGA-DLVLHSATKFIGGH 352 (531)
Q Consensus 287 tklV~l-esP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~---a~~~~~~~l------~~ga-Divv~S~sK~lgg~ 352 (531)
..+|++ ...|||||.-+. .++|.++.++.|.+.++|-+| +.++..+.. ..+. -+|+.|+||.||--
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLY 251 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLY 251 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhh
Confidence 234444 556899998876 457888889999999999995 344433221 1122 37899999999999
Q ss_pred CCceEEEEEe--ChHHHHHH----HHHhhhcCCCchHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHc
Q 009604 353 NDVLAGSISG--SGKLVTQI----RNLHHVLGGALNPNAAYLII----------RGMKTLHLRVQQQNSTALRMAKILEA 416 (531)
Q Consensus 353 g~v~gG~iv~--~~~li~~l----~~~~~~~G~~~s~~~a~l~l----------~~L~tl~~r~~~~~~na~~La~~L~~ 416 (531)
|.++|++.+. +.+...++ +...+..-+.++...+.+.. .-.+.+..-.+++.+.+..+.+.|++
T Consensus 252 gERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~ 331 (396)
T COG1448 252 GERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKA 331 (396)
T ss_pred hhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9888776554 33444333 33333222222222222211 11233444445566777788888876
Q ss_pred CCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcC
Q 009604 417 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK 467 (531)
Q Consensus 417 ~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~ 467 (531)
+..-. ++..... .-||+++. .-..+++.++.+...
T Consensus 332 ~~~~~-----------~f~~i~~----Q~GMFsy~-Gls~~QV~rLree~~ 366 (396)
T COG1448 332 LGAPR-----------NFDFIIS----QRGMFSYT-GLSPEQVDRLREEFG 366 (396)
T ss_pred hCCCc-----------ccchHhh----cCceeecC-CCCHHHHHHHHHhcc
Confidence 31100 1111111 24677775 124566766666554
No 378
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.52 E-value=1e-06 Score=92.48 Aligned_cols=264 Identities=16% Similarity=0.130 Sum_probs=155.7
Q ss_pred EeCChHHHHHHHHHHh---ccC--C---CEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC------CHHHHHHhccCC
Q 009604 220 IMASGMSASTVMLLAL---VPA--G---GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA------DMEGLEAALNNN 285 (531)
Q Consensus 220 ~~sSG~~Ai~~al~al---l~p--G---D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~------d~e~Le~al~~~ 285 (531)
.+++|++++.++-... .+. | ..|+++... ...++.....++++++.++.+ |+..+.+.++++
T Consensus 143 ~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v----~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eN 218 (491)
T KOG1383|consen 143 GTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNV----HAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDEN 218 (491)
T ss_pred cccccchHHHHHHHHHHHHHHhccCCCCccccchHHH----HHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccc
Confidence 4556667755544332 111 2 235554333 334556667778888777643 899999999985
Q ss_pred CcEEEEEeCCCCCCCcccCHHHHHHHHHh-cCCEEEEeCCCCCCccc----c--cccc---CCcEEEECCccccccCCCc
Q 009604 286 NVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQ----K--ALSL---GADLVLHSATKFIGGHNDV 355 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~dl~~I~~la~~-~gi~lIvD~a~a~~~~~----~--~l~~---gaDivv~S~sK~lgg~g~v 355 (531)
|.+|+.+.|+-|+|.+-|+++|.++.-+ +++++++|.+-+.++.. . +.++ |+.-+..+.|||--.+.+
T Consensus 219 -ti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G- 296 (491)
T KOG1383|consen 219 -TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAG- 296 (491)
T ss_pred -eEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCceeEeeccceeeeeecC-
Confidence 9999999999999999999999999988 99999999996654431 1 1222 233455578998432222
Q ss_pred eEEEEEeChHHH-HHHHHHhhhcC----------CCch--HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 009604 356 LAGSISGSGKLV-TQIRNLHHVLG----------GALN--PNAAYLII--RGMKTLHLRVQQQNSTALRMAKILEAHPKV 420 (531)
Q Consensus 356 ~gG~iv~~~~li-~~l~~~~~~~G----------~~~s--~~~a~l~l--~~L~tl~~r~~~~~~na~~La~~L~~~p~v 420 (531)
++.++..++++. +++.......| ...+ ...+|..+ -|-+-....+++..++++.|.+.+++.+++
T Consensus 297 ~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i 376 (491)
T KOG1383|consen 297 SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGI 376 (491)
T ss_pred cEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 233444444443 22211111112 1111 23445433 345566777888889999999999986655
Q ss_pred eEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHH
Q 009604 421 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 499 (531)
Q Consensus 421 ~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~-~~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~ 499 (531)
.-+.- ..++|.+.++ ..+..++-+.|+.+| ..+- ....|+ ..|
T Consensus 377 ~i~gk--------------------p~vs~~~~~s~~~~i~elsd~l~~~G--W~ln----alq~P~-a~H--------- 420 (491)
T KOG1383|consen 377 KIVGK--------------------PLVSFILFGSNDVNIFELSDLLRKKG--WILN----ALQFPA-AIH--------- 420 (491)
T ss_pred eecCC--------------------CcEEEEEccCCccchhhhhHHHHhcC--cCcc----ccCCCC-ceE---------
Confidence 33221 2456665543 233444555554333 1111 112232 111
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 009604 500 KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 530 (531)
Q Consensus 500 ~~gi~~~lIRlSvGlE~~edli~dL~~AL~~ 530 (531)
-...|+.+--+=.++++.||++++++
T Consensus 421 -----i~vt~~~~~~~~A~~~v~Di~~~~~e 446 (491)
T KOG1383|consen 421 -----ICVTRVHAREDVADRFVADIRKVVEE 446 (491)
T ss_pred -----EEEEeeeccHHHHHHHHHHHHHHHHH
Confidence 13456655444478999999998875
No 379
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.28 E-value=4.4e-05 Score=80.26 Aligned_cols=233 Identities=17% Similarity=0.264 Sum_probs=139.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHh-------ccCC-----------CE-EEEcCCCccchHHHHHhhcccCCcEEEEeCCC-
Q 009604 214 GAESTVIMASGMSASTVMLLAL-------VPAG-----------GH-IVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 273 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~al-------l~pG-----------D~-VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~- 273 (531)
|....++.++.+++...++.+. ++.+ +- +.+++..|.+. +..+-..+++++.++.+
T Consensus 138 g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssv----eka~~i~~VklR~l~td~ 213 (511)
T KOG0628|consen 138 GDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSV----EKACLIAGVKLRALPTDE 213 (511)
T ss_pred CCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchH----HHhHhhcceeEEEeeccc
Confidence 3456788899988777766542 2222 12 33344555543 34444446777766543
Q ss_pred ----CHHHHHHhccCC----CcEEEEEeCCCCCCCcc--cCHHHHHHHHHhcCCEEEEeCCCCCCcc-c---cccccC--
Q 009604 274 ----DMEGLEAALNNN----NVSLFFTESPTNPFLRC--VDVKLVSDLCHKKGAIVCIDGTFATPLN-Q---KALSLG-- 337 (531)
Q Consensus 274 ----d~e~Le~al~~~----~tklV~lesP~NPtG~v--~dl~~I~~la~~~gi~lIvD~a~a~~~~-~---~~l~~g-- 337 (531)
+.+.|+++|.++ -+-.+++.+.. -|+.+ -++.+|..+|+++|++|+||.+|+.... + +.+--|
T Consensus 214 n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-TT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie 292 (511)
T KOG0628|consen 214 NFGMRGDTLRKAIEEDIARGLIPFFVCATLG-TTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIE 292 (511)
T ss_pred CcCCCHHHHHHHHHHHHhCCCccEEEEEeec-CccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcch
Confidence 567787777543 13344443333 34444 3699999999999999999999985432 1 222223
Q ss_pred -CcEEEECCccccccCCCceEEEEE----------eChHHHHH--------HHHHhhhcCCCchHHHHHHHHH--HHHHH
Q 009604 338 -ADLVLHSATKFIGGHNDVLAGSIS----------GSGKLVTQ--------IRNLHHVLGGALNPNAAYLIIR--GMKTL 396 (531)
Q Consensus 338 -aDivv~S~sK~lgg~g~v~gG~iv----------~~~~li~~--------l~~~~~~~G~~~s~~~a~l~l~--~L~tl 396 (531)
+|-+-+-.||++--+-|+-.=|+- .++..++. ++.+.-.+|-..-..-.|..+| |.+.+
T Consensus 293 ~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~l 372 (511)
T KOG0628|consen 293 YADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENL 372 (511)
T ss_pred hhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHH
Confidence 566777788988766655332221 11211110 1112223344444556676655 56788
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC
Q 009604 397 HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI 468 (531)
Q Consensus 397 ~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~ 468 (531)
..+++++.+.++.+.+.+.+.+..+-+.-. .=+++.|.+++..+..+++++++..
T Consensus 373 q~~iR~h~~La~~fe~lv~~d~~FE~~~~~-----------------~lgLvcFRlk~~N~~ne~Ll~~in~ 427 (511)
T KOG0628|consen 373 QNYIREHVRLAKEFETLVRADPRFEIVNKR-----------------ILGLVCFRLKGDNEINEALLNRLNS 427 (511)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCcceeeccc-----------------ccceeEEeecCCcHHHHHHHHHHHh
Confidence 888888888887777777665543322111 1268999999887888999999864
No 380
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.27 E-value=6.6e-06 Score=85.81 Aligned_cols=154 Identities=16% Similarity=0.206 Sum_probs=96.2
Q ss_pred CCcEEEeCChH-HHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhcc
Q 009604 215 AESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALN 283 (531)
Q Consensus 215 ~e~~i~~sSG~-~Ai~~al~all--~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--------~d~e~Le~al~ 283 (531)
...+++++-.+ .++.+.+.++- ..++.|+.+...+.+.+..+ ...|.++..++. .|++.+++.++
T Consensus 74 ~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai----~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~ 149 (389)
T PF05889_consen 74 VKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAI----ERAGLEPVVVENVLEGDELITDLEAIEAKIE 149 (389)
T ss_dssp HCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHH----HHTT-EEEEE-EEEETTEEEEHHHHHHHHHH
T ss_pred ccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHH----HhcCCeEEEeeccCCCCeeeccHHHHHHHHH
Confidence 45677776555 46667777664 45789999887777655333 334666666652 25777777775
Q ss_pred CC--CcEEEEEeCCCCCCCcccC-HHHHHHHHHhcCCEEEEeCCCCCCcc------ccccccC-CcEEEECCccccccCC
Q 009604 284 NN--NVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-ADLVLHSATKFIGGHN 353 (531)
Q Consensus 284 ~~--~tklV~lesP~NPtG~v~d-l~~I~~la~~~gi~lIvD~a~a~~~~------~~~l~~g-aDivv~S~sK~lgg~g 353 (531)
+. +..+.++.+++-..++..| +++|+++|+++|++.++.++|+.... +.....| .|+++.|.-|-|--+.
T Consensus 150 ~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPv 229 (389)
T PF05889_consen 150 ELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPV 229 (389)
T ss_dssp HHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEES
T ss_pred HhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecC
Confidence 31 2578888889888899999 99999999999999999999986321 2333344 7899999988765332
Q ss_pred CceEEEEEe-ChHHHHHHHHHh
Q 009604 354 DVLAGSISG-SGKLVTQIRNLH 374 (531)
Q Consensus 354 ~v~gG~iv~-~~~li~~l~~~~ 374 (531)
+ ++.+++ ++..+..+....
T Consensus 230 G--gai~As~~~~~i~~vs~~Y 249 (389)
T PF05889_consen 230 G--GAIMASFDPSGILAVSKEY 249 (389)
T ss_dssp S--HEEEEESSHHHHHHHHHTS
T ss_pred C--CcEEEecCHHHHHHHHHHh
Confidence 1 334444 345666665433
No 381
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.23 E-value=4.9e-06 Score=85.54 Aligned_cols=143 Identities=17% Similarity=0.240 Sum_probs=92.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCCc-EEEE-eCC-----CCHHHHHHhccC--
Q 009604 215 AESTVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGI-TATV-IDP-----ADMEGLEAALNN-- 284 (531)
Q Consensus 215 ~e~~i~~sSG~~Ai~~al~all-~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi-~v~~-vd~-----~d~e~Le~al~~-- 284 (531)
++++.++++.+.|+..+|..++ .+.+-|+++-|-|+-.-..+ ..+|. .|.+ +|. .|.++|++.+++
T Consensus 136 p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti----~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~ 211 (475)
T KOG0258|consen 136 PEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATI----SLLGGTQVPYYLDEESNWSLDVAELERSVDEAR 211 (475)
T ss_pred HHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHH----HHhCCcccceeeccccCCCCCHHHHHHHHHHHh
Confidence 3445555555588888887664 56788999998886432222 22222 2222 232 367777665542
Q ss_pred --CCcEEEEEeCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccc---------cc-cccC---Cc----EEE
Q 009604 285 --NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---------KA-LSLG---AD----LVL 342 (531)
Q Consensus 285 --~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~---------~~-l~~g---aD----ivv 342 (531)
-+++++++-||.||||.+.. +++|.++|+++|+.|+-||+|-..+.. +. .++| .| +..
T Consensus 212 k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~Sf 291 (475)
T KOG0258|consen 212 KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASF 291 (475)
T ss_pred ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEee
Confidence 24778888899999999984 788899999999999999995432111 00 1111 21 567
Q ss_pred ECCccccccCCCceEEEEE
Q 009604 343 HSATKFIGGHNDVLAGSIS 361 (531)
Q Consensus 343 ~S~sK~lgg~g~v~gG~iv 361 (531)
+|.||-+.|--+-.||++=
T Consensus 292 hSvSKGy~gECG~RGGYmE 310 (475)
T KOG0258|consen 292 HSVSKGYMGECGQRGGYME 310 (475)
T ss_pred ecccccceeeecccCCeee
Confidence 8899988877666678763
No 382
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.17 E-value=1.6e-05 Score=83.02 Aligned_cols=106 Identities=16% Similarity=0.242 Sum_probs=83.7
Q ss_pred CEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHh
Q 009604 240 GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 314 (531)
Q Consensus 240 D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~ 314 (531)
+.+|+++..|+.... .....|.+|+.++.+ |+++|++++.+ ++.++.+++|+.---.-.++.+|+++.|+
T Consensus 158 ~~~LIP~SAHGTNPA----SAam~G~~VV~V~~~~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~ 232 (496)
T COG1003 158 NICLIPDSAHGTNPA----SAAMAGFKVVVVKCDENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHE 232 (496)
T ss_pred cEEEeeccccCCChh----hHhhcCceEEEEecCCCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHH
Confidence 579999999987652 234457888777643 89999999987 49999999998322233479999999999
Q ss_pred cCCEEEEeCCCCCCc--cccccccCCcEEEECCccccc
Q 009604 315 KGAIVCIDGTFATPL--NQKALSLGADLVLHSATKFIG 350 (531)
Q Consensus 315 ~gi~lIvD~a~a~~~--~~~~l~~gaDivv~S~sK~lg 350 (531)
+|..|..|.+-...+ ..+|-++|.|++=.-+||.|+
T Consensus 233 ~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLHKTF~ 270 (496)
T COG1003 233 AGGQVYYDGANLNAIVGLARPGDMGFDVVHLNLHKTFC 270 (496)
T ss_pred cCCEEEecCcchhhhhccccccccccceEEeecccccc
Confidence 999999999943322 357888999999999999997
No 383
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.64 E-value=0.00062 Score=71.17 Aligned_cols=202 Identities=12% Similarity=0.124 Sum_probs=121.1
Q ss_pred CcEEEeCChHHHHHHHHHHh---ccC-----C-----CEE-EEcCCCccchHHHHHhhcccCC---cEEEEeCC-----C
Q 009604 216 ESTVIMASGMSASTVMLLAL---VPA-----G-----GHI-VTTTDCYRKTRIFIETVLPKMG---ITATVIDP-----A 273 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~al---l~p-----G-----D~V-Iv~~~~y~~t~~~~~~~l~~~G---i~v~~vd~-----~ 273 (531)
.+.|+.++|+-++..++..- .-| | +-| .+++.+|.+.... ...+| -.+..++. .
T Consensus 160 ~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~ka----Aa~lg~gtd~c~~v~t~e~Gkm 235 (510)
T KOG0629|consen 160 GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKA----AAFLGLGTDHCIKVKTDERGKM 235 (510)
T ss_pred CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHH----HHHhccCCceeEEecccccCcc
Confidence 57888888885554444321 111 1 333 4455566665432 22233 23444443 3
Q ss_pred CHHHHHHhccCCC-----cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccc----ccc---CCcEE
Q 009604 274 DMEGLEAALNNNN-----VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----LSL---GADLV 341 (531)
Q Consensus 274 d~e~Le~al~~~~-----tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~----l~~---gaDiv 341 (531)
++++||+.|...+ +-+|-...-+...|..-||+.|+++|++|+.+++||.+|+.++.... .-. .+|-|
T Consensus 236 ~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~Sv 315 (510)
T KOG0629|consen 236 IPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSV 315 (510)
T ss_pred chHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCce
Confidence 6889988875322 23444444445668888999999999999999999999988654321 111 36789
Q ss_pred EECCccccccCCCceEEEEEeCh-HHHHHHHHHh--------------h-------hcCCCchHHHHHHHHH--HHHHHH
Q 009604 342 LHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLH--------------H-------VLGGALNPNAAYLIIR--GMKTLH 397 (531)
Q Consensus 342 v~S~sK~lgg~g~v~gG~iv~~~-~li~~l~~~~--------------~-------~~G~~~s~~~a~l~l~--~L~tl~ 397 (531)
..+.||++|.+-. .++...+. .++++..... . ..|-....+--|+..+ |.+.++
T Consensus 316 twnpHK~~gaplq--Csa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe 393 (510)
T KOG0629|consen 316 TWNPHKLMGAPLQ--CSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFE 393 (510)
T ss_pred eecHHHhhcCcch--hhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHH
Confidence 9999999986532 23333332 2232221110 0 1233445566777654 455667
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCceEE
Q 009604 398 LRVQQQNSTALRMAKILEAHPKVKRV 423 (531)
Q Consensus 398 ~r~~~~~~na~~La~~L~~~p~v~~V 423 (531)
..+++..++|+++.+.|++.+.-..+
T Consensus 394 ~~v~k~~~lA~yl~~~lrer~~~~~l 419 (510)
T KOG0629|consen 394 AQVDKCLRLAEYLYDRLREREGFEML 419 (510)
T ss_pred HHHHHHHHHHHHHHHHHHhcccceeh
Confidence 77888888999999999887654444
No 384
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.62 E-value=0.0011 Score=67.72 Aligned_cols=178 Identities=16% Similarity=0.261 Sum_probs=99.2
Q ss_pred HHHHHHhccC-----CCcEEEEEeCCCCCCCccc---C-HHHHHHHHHhcCCEEEEeCCCCCC-cc-----c--cccccC
Q 009604 275 MEGLEAALNN-----NNVSLFFTESPTNPFLRCV---D-VKLVSDLCHKKGAIVCIDGTFATP-LN-----Q--KALSLG 337 (531)
Q Consensus 275 ~e~Le~al~~-----~~tklV~lesP~NPtG~v~---d-l~~I~~la~~~gi~lIvD~a~a~~-~~-----~--~~l~~g 337 (531)
++++|+.|.+ .++.+|++|.....-|.-. + +..+.+++++||+.+||||++..+ .. . --+..-
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 5677777742 2478999999998887653 2 689999999999999999996421 11 1 112334
Q ss_pred CcEEEECCccccccCCCceEEEEEeChHHHH--HHHHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009604 338 ADLVLHSATKFIGGHNDVLAGSISGSGKLVT--QIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE 415 (531)
Q Consensus 338 aDivv~S~sK~lgg~g~v~gG~iv~~~~li~--~l~~~~~~~G~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~ 415 (531)
.|+|. |||-+- .||+.. +++++. ..+.+...+| .|.-..++...++.+. -+....|...+-+.|.
T Consensus 335 pD~vT--FSKK~q-----~gGffh-~~~frpn~pYrifNTWmG---dP~k~lll~~vv~~I~--~~~Ll~n~~~vG~~l~ 401 (484)
T KOG1405|consen 335 PDVVT--FSKKFQ-----TGGFFH-DEEFRPNEPYRIFNTWMG---DPSKNLLLEEVVQEIK--REDLLNNVAHVGKALL 401 (484)
T ss_pred cccee--hhhhhh-----cCcccc-CcccCCCchHHHhhhhcC---ChHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHH
Confidence 78877 556654 256443 334332 1111111112 2333333222222221 1233445544444332
Q ss_pred cC-CCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCCcccccCCc
Q 009604 416 AH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 478 (531)
Q Consensus 416 ~~-p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~~~~~~fl~~L~~~~iavS~Gg~ 478 (531)
.. ..+ .-.||+.- ..++|.|-+++++++.+ ..-++|+..+++ .|+..||+
T Consensus 402 ~gL~~L-q~~~p~~~---------~~~RGrGTF~a~d~ps~-~~Rdk~i~~~~~--nGv~~GGC 452 (484)
T KOG1405|consen 402 KGLLEL-QAKYPGKI---------NNLRGRGTFIAWDCPSG-SIRDKLILIARL--NGVNLGGC 452 (484)
T ss_pred HHHHHH-HHhCchhh---------hcccccceEEEEeCCCh-HHHHHHHHHHHH--cCceeccc
Confidence 21 000 12344421 23467899999999754 456788888876 46777876
No 385
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.37 E-value=0.0017 Score=65.31 Aligned_cols=149 Identities=15% Similarity=0.201 Sum_probs=109.9
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCC---EEEEcCCCccchHHHHHhhcccCCcEEE----EeCCC------CHHHHHHhc
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPKMGITAT----VIDPA------DMEGLEAAL 282 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD---~VIv~~~~y~~t~~~~~~~l~~~Gi~v~----~vd~~------d~e~Le~al 282 (531)
+++-+++|=+.-+..++..+-+|-. +|+...-.|++.+-.+...++..|+.+. .+.+. ..+++.+.|
T Consensus 129 ~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~I 208 (465)
T KOG3846|consen 129 NEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTI 208 (465)
T ss_pred hhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHH
Confidence 3455566666667777778888764 6888888888877777677777777532 22221 345565556
Q ss_pred cCC--CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEECCccccccCCCceEEE
Q 009604 283 NNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 283 ~~~--~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
..+ ...+|++...+-.||...|+.+|...-+..|++|=.|-+++.+ ++.....+|+|+.+.-..||++...+-+||.
T Consensus 209 EkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGl 288 (465)
T KOG3846|consen 209 EKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGL 288 (465)
T ss_pred HhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCcccee
Confidence 432 3789999999999999999999997777789999999998764 4445567899999999999998665567888
Q ss_pred EEeCh
Q 009604 360 ISGSG 364 (531)
Q Consensus 360 iv~~~ 364 (531)
.+-.+
T Consensus 289 FvHek 293 (465)
T KOG3846|consen 289 FVHEK 293 (465)
T ss_pred eeehh
Confidence 77543
No 386
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.37 E-value=0.0014 Score=65.78 Aligned_cols=272 Identities=16% Similarity=0.212 Sum_probs=149.0
Q ss_pred CCCcEEEeCChHHHHHHHHHH---hccCCCEEEEcCCCccchHHHHHhhcc-c----CCc-EEEE--e-CC---------
Q 009604 214 GAESTVIMASGMSASTVMLLA---LVPAGGHIVTTTDCYRKTRIFIETVLP-K----MGI-TATV--I-DP--------- 272 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~a---ll~pGD~VIv~~~~y~~t~~~~~~~l~-~----~Gi-~v~~--v-d~--------- 272 (531)
+-.-|+|++||++|+.++|+. +.+..|.|.+ +..|++-....-++-+ + .++ +..+ + +.
T Consensus 101 eLsvc~F~NSGSEANDLALRLAR~ftkhqDvItl-dHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r 179 (452)
T KOG1403|consen 101 ELSVCFFVNSGSEANDLALRLARNFTKHQDVITL-DHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFR 179 (452)
T ss_pred CceEEEEecCCchhhHHHHHHHHhhcccCceEEE-echhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccc
Confidence 445689999999999999864 3455565555 4455553211101100 0 011 1111 1 10
Q ss_pred ------CC-----HHHHHHhcc----CC-CcEEEEEeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCCCC----
Q 009604 273 ------AD-----MEGLEAALN----NN-NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP---- 328 (531)
Q Consensus 273 ------~d-----~e~Le~al~----~~-~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a~~---- 328 (531)
.| .+.+++.+. +. .+.+.+-|+-.+=-|.++| .+++++..+.+|-..|.||++..+
T Consensus 180 ~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG 259 (452)
T KOG1403|consen 180 DKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVG 259 (452)
T ss_pred cccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccc
Confidence 01 133444332 11 3556666777776788776 568888889999999999995432
Q ss_pred ---ccccccccCCcEEEECCccccccCCCceEEEEEeChHHHHHHHH----HhhhcCCCchHHHHHHHHHHHHHHHHHHH
Q 009604 329 ---LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN----LHHVLGGALNPNAAYLIIRGMKTLHLRVQ 401 (531)
Q Consensus 329 ---~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~----~~~~~G~~~s~~~a~l~l~~L~tl~~r~~ 401 (531)
+.......-.|||. +-|-+|..- ..++++..+++.+.+.. +.+.+|+ +|..+...+.-|+.+.. +
T Consensus 260 ~hyWafq~y~fiPDIVt--mgKpmGNGh--PVa~VattkeIA~Af~atgv~YFNTyGG--nPVsCAv~laVm~v~e~--E 331 (452)
T KOG1403|consen 260 SHYWAFQTYNFIPDIVT--MGKPMGNGH--PVAAVATTKEIAQAFHATGVEYFNTYGG--NPVSCAVGLAVMRVCED--E 331 (452)
T ss_pred hhhhhhhhhccccchhe--ecccCCCCC--eeeEEeccHHHHHHhccccceehhccCC--CchhHHHHHHHHHHHhh--h
Confidence 11222223367776 778887332 36788888888777653 3344554 46666665555554432 4
Q ss_pred HHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcC-------CHHHHHHHHHHcCCCC-ccc
Q 009604 402 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DLTATIKFIDALKIPY-IAP 473 (531)
Q Consensus 402 ~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g-------~~~~~~~fl~~L~~~~-iav 473 (531)
..+++++.+-++|+..-+-.+..++-+ ...+|.|-++.+++-. +...+...+.+|+... +-.
T Consensus 332 ~Lq~ha~~vG~~L~~lL~~~k~kh~~I----------GDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLl 401 (452)
T KOG1403|consen 332 NLQEHAQQVGEKLEVLLRRLKQKHECI----------GDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLL 401 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhccce----------eccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEE
Confidence 455666666665543210001111111 1235678888888742 1245666777776432 333
Q ss_pred ccCCcccccccCccccccCCCHHHHHhcCCCCCeEE----EEecCCCHHHHHHHHHHHHH
Q 009604 474 SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR----FSFGVEDFEDLKADVLQALH 529 (531)
Q Consensus 474 S~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIR----lSvGlE~~edli~dL~~AL~ 529 (531)
|.-|.. .+.|. +++..||.++.+..|++.|.
T Consensus 402 saDGPh-------------------------~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 402 SADGPH-------------------------RNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred ecCCCC-------------------------CceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 322221 12222 35667888888888877764
No 387
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.37 E-value=0.0023 Score=69.88 Aligned_cols=244 Identities=22% Similarity=0.214 Sum_probs=137.9
Q ss_pred EEeCChHHH---HHHHHHHhc-cCCC----EEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCC
Q 009604 219 VIMASGMSA---STVMLLALV-PAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN 285 (531)
Q Consensus 219 i~~sSG~~A---i~~al~all-~pGD----~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~ 285 (531)
+--+||.++ =..++++.+ ..|+ .-+++...|+..... ....|.+|..++. .|..+|++...++
T Consensus 602 ~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPAS----A~MagmkvvpV~~~~~G~id~~dLk~kaekh 677 (1001)
T KOG2040|consen 602 LQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPAS----AAMAGMKVVPVGCDANGNIDMVDLKAKAEKH 677 (1001)
T ss_pred ecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhh----HHhcCCEEEEeeccCCCCccHHHHHHHHHHh
Confidence 334566532 233455543 3443 346666677664422 2334666666653 2777887766543
Q ss_pred --CcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC--ccccccccCCcEEEECCccccc-cCCC--ceEE
Q 009604 286 --NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVLHSATKFIG-GHND--VLAG 358 (531)
Q Consensus 286 --~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~--~~~~~l~~gaDivv~S~sK~lg-g~g~--v~gG 358 (531)
+..++.+..|+..--.-.++++++++.|+||--|..|.+-... -..+|-+.|+|+.=--+||.|+ +||+ --+|
T Consensus 678 ~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~g 757 (1001)
T KOG2040|consen 678 KDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMG 757 (1001)
T ss_pred hhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccceeecccceeeecCCCCCCCCC
Confidence 4788999899843333357999999999999999999994322 2467888999999889999986 2221 1123
Q ss_pred EEEeChHHHHHHHHH--h--------h--------hcCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 009604 359 SISGSGKLVTQIRNL--H--------H--------VLGGA--LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHP 418 (531)
Q Consensus 359 ~iv~~~~li~~l~~~--~--------~--------~~G~~--~s~~~a~l~l~~L~tl~~r~~~~~~na~~La~~L~~~p 418 (531)
=|..++.+...+-.. . . .+|.. +..-.+|+-+-|..-|..--+...-|+.++++.|+.|=
T Consensus 758 PIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~hY 837 (1001)
T KOG2040|consen 758 PIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESHY 837 (1001)
T ss_pred ccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhcc
Confidence 333333333222110 0 0 11211 11223454444444444444555578899999999885
Q ss_pred CceEEeCCCCC---------------CCchhhhhhhhc-CCc---------ccEEEEEEcC--CHHHHHHHHHHc
Q 009604 419 KVKRVHYPGLK---------------SHPEHHIATQQM-TGF---------GGVVSFEVDG--DLTATIKFIDAL 466 (531)
Q Consensus 419 ~v~~V~~pgl~---------------s~p~~~l~~~~~-~g~---------g~ivsf~l~g--~~~~~~~fl~~L 466 (531)
++....-.++- ...-.+++||.| .|| .+.+.++-.. +..+.++|+++|
T Consensus 838 kil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAl 912 (1001)
T KOG2040|consen 838 KILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDAL 912 (1001)
T ss_pred ceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHH
Confidence 43222211211 122346777776 232 2344444322 346788898887
No 388
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.33 E-value=0.00079 Score=73.39 Aligned_cols=125 Identities=21% Similarity=0.350 Sum_probs=88.4
Q ss_pred EEEeCChHHHHHHHHHH-hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCC
Q 009604 218 TVIMASGMSASTVMLLA-LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 296 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~a-ll~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~ 296 (531)
+-+.--|++|-.++.++ -..++.++++...+|+.+...++...+.+|+++...| +++...-. + .+..|++.-|.
T Consensus 183 ASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~---~~~~~~s~-~-~v~gvlvQYP~ 257 (1001)
T KOG2040|consen 183 ASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD---IKEADYSS-K-DVSGVLVQYPD 257 (1001)
T ss_pred hhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecC---HHHhhccc-c-ceeEEEEEcCC
Confidence 33455566444433332 2455677999999999999999888888899865543 44333322 3 38899998887
Q ss_pred CCCCcccCHHHHHHHHHhcCCEEEEeCCC-CCCccccccccCCcEEEECCccc
Q 009604 297 NPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKF 348 (531)
Q Consensus 297 NPtG~v~dl~~I~~la~~~gi~lIvD~a~-a~~~~~~~l~~gaDivv~S~sK~ 348 (531)
-.|.+.|.+++++.+++.|.++++-.-. +--+...|-++|+||++.|...+
T Consensus 258 -t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 258 -TEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred -CCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 4699999999999999999887663322 22234567789999999997664
No 389
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.18 E-value=0.11 Score=52.74 Aligned_cols=149 Identities=17% Similarity=0.177 Sum_probs=90.6
Q ss_pred EEEeCChHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhcccCCc----EEEEeCC----CCHHHHHHhccCCCc
Q 009604 218 TVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGI----TATVIDP----ADMEGLEAALNNNNV 287 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~al--l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi----~v~~vd~----~d~e~Le~al~~~~t 287 (531)
.+-.-||+.|+..+..-+ .-+...|.++.|++..-...+ +..|. .+.+.|. .|++.+...|...+.
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if----~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe 177 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIF----EKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPE 177 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHH----HHcCCceeeeeeeecCCCceecHHHHHHHHhhCCC
Confidence 445667887777664322 223567899999987765444 33452 3344443 367777777754323
Q ss_pred E-EEEEeC-CCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccccc----------cccCC-cEEEECCcccccc
Q 009604 288 S-LFFTES-PTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGA-DLVLHSATKFIGG 351 (531)
Q Consensus 288 k-lV~les-P~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~~----------l~~ga-Divv~S~sK~lgg 351 (531)
+ ++++.. .+||||.-.. ...|++..++.+...+.|-+|-.....++ .+.|. -+|+.||+|-+|-
T Consensus 178 ~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGl 257 (410)
T KOG1412|consen 178 GSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGL 257 (410)
T ss_pred CcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhccc
Confidence 3 444433 3799997665 44677777888999999999643322211 12233 2788999999998
Q ss_pred CCCceEEE--EEeChHHHHHH
Q 009604 352 HNDVLAGS--ISGSGKLVTQI 370 (531)
Q Consensus 352 ~g~v~gG~--iv~~~~li~~l 370 (531)
.+.++|-+ ++-++..+..+
T Consensus 258 YneRvGnltvv~~n~a~i~~v 278 (410)
T KOG1412|consen 258 YNERVGNLTVVVNNPAVIAGV 278 (410)
T ss_pred ccccccceEEEecChhHHHHH
Confidence 88776543 22344444443
No 390
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.08 E-value=0.037 Score=57.40 Aligned_cols=168 Identities=15% Similarity=0.058 Sum_probs=98.8
Q ss_pred CEEEEeCCCCCCcccccccc-CCcEEEECCccccccCCCceEEEEEeChHHHHHHHHH-h---------hhcC---CCch
Q 009604 317 AIVCIDGTFATPLNQKALSL-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-H---------HVLG---GALN 382 (531)
Q Consensus 317 i~lIvD~a~a~~~~~~~l~~-gaDivv~S~sK~lgg~g~v~gG~iv~~~~li~~l~~~-~---------~~~G---~~~s 382 (531)
.++|+|.+-... -++++. .-|++..+.-|.+|+.| .++++.++++++++... . ...| .+++
T Consensus 171 ~~~v~D~SS~il--sr~iDvsk~dviyagaQKnlGpaG---ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPp 245 (365)
T COG1932 171 GLLVADASSAIL--SRPIDVSKYDVIYAGAQKNLGPAG---LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPP 245 (365)
T ss_pred ceEEEecccHHh--cCCCChhHcceEEEehhhccCccc---eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcH
Confidence 789999884322 122221 35799999999999988 58888899888877543 1 0112 3444
Q ss_pred HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCCCCchhhhhhhhcCCcccEEEEEEcCCH
Q 009604 383 PNAAYLIIRGMKTL------HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL 456 (531)
Q Consensus 383 ~~~a~l~l~~L~tl------~~r~~~~~~na~~La~~L~~~p~v~~V~~pgl~s~p~~~l~~~~~~g~g~ivsf~l~g~~ 456 (531)
.+.-|+....++.+ ..-.++..++++.|.+++.+.+.......|.. + .--.+.|.+. +.
T Consensus 246 tfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~---------R-----S~mnV~f~~~-~~ 310 (365)
T COG1932 246 TFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKAN---------R-----SRMNVTFTLV-DA 310 (365)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhh---------c-----cceeEEEEcC-cH
Confidence 55555544444443 23345556789999999998754322111111 1 1234677775 33
Q ss_pred HHHHHHHHHcCCCCcccccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHH
Q 009604 457 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALH 529 (531)
Q Consensus 457 ~~~~~fl~~L~~~~iavS~Gg~~Sli~~p~~~s~~~~~~~~~~~~gi~~~lIRlSvG----lE~~edli~dL~~AL~ 529 (531)
+-...|+..+...+...=.| |. . .+-+|+|++ +|+.+.|++-++...+
T Consensus 311 ~ld~~fv~eae~~gl~~lkG-------------hr-----------~-vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 311 ELDKGFVAEAEAAGLIYLKG-------------HR-----------S-VGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred HHHHHHHHHHHHcCCceecc-------------cc-----------C-CCceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 45577887776544221111 11 1 233999987 5677777776665543
No 391
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=96.08 E-value=0.07 Score=55.19 Aligned_cols=196 Identities=21% Similarity=0.194 Sum_probs=108.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccC-----CCEEEEcCCCccchHHHHHhhcccCCcEEEEe--C-------------CC
Q 009604 214 GAESTVIMASGMSASTVMLLALVPA-----GGHIVTTTDCYRKTRIFIETVLPKMGITATVI--D-------------PA 273 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~p-----GD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~v--d-------------~~ 273 (531)
|-+..+-+.-|-.|=+..+..++++ |.+.++..+.|..|.+.- .+..|..+.-+ | ..
T Consensus 93 Gfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h---~~~ng~~~~n~~~~ea~d~~~~~pFKGd~ 169 (471)
T COG3033 93 GFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGH---IQINGATPRNVYVDEAFDTEVKYPFKGNF 169 (471)
T ss_pred CceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHH---HHhcCCccccccccccccccccCCCCCcc
Confidence 4455666666665555555555554 555666667776654322 12223222111 1 12
Q ss_pred CHHHHHHhccCC---CcEEEEEeCCCCC-CCccc---CHHHHHHHHHhcCCEEEEeCC-CCCC-cc--cc----------
Q 009604 274 DMEGLEAALNNN---NVSLFFTESPTNP-FLRCV---DVKLVSDLCHKKGAIVCIDGT-FATP-LN--QK---------- 332 (531)
Q Consensus 274 d~e~Le~al~~~---~tklV~lesP~NP-tG~v~---dl~~I~~la~~~gi~lIvD~a-~a~~-~~--~~---------- 332 (531)
|++.|++.|++- ++-.|++.--+|- .|..+ +++++.++|++|+++++.|.+ |+.. +. ++
T Consensus 170 D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~ 249 (471)
T COG3033 170 DLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIE 249 (471)
T ss_pred CHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHH
Confidence 788999988642 3556666544443 45554 477999999999999999998 3321 11 11
Q ss_pred -----ccccCCcEEEECCccccccCCCceEEEEEeChH----HHHHHHHHh------hhcCCCchHHHHHHHHHHHHHH-
Q 009604 333 -----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGK----LVTQIRNLH------HVLGGALNPNAAYLIIRGMKTL- 396 (531)
Q Consensus 333 -----~l~~gaDivv~S~sK~lgg~g~v~gG~iv~~~~----li~~l~~~~------~~~G~~~s~~~a~l~l~~L~tl- 396 (531)
... -+|-.+-|+-|=- +- -+||+++.+++ +.+.++... ..+|+... -+...+..||..-
T Consensus 250 ~IarEm~s-YaD~~~mS~KKD~--lv-nmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~G-rdmealAvGL~e~~ 324 (471)
T COG3033 250 EIAREMYS-YADGCTMSAKKDG--LV-NMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAG-RDMEALAVGLREGV 324 (471)
T ss_pred HHHHHHHh-hhhhheeeccccc--ee-ccccEEEecCccHHHHHHHHHhheEeeccccccCcccc-hhHHHHHHHHHHhc
Confidence 011 3677788887742 22 25899998765 444444322 12343222 2222223354431
Q ss_pred -HHHHHHHHHHHHHHHHHHHcC
Q 009604 397 -HLRVQQQNSTALRMAKILEAH 417 (531)
Q Consensus 397 -~~r~~~~~~na~~La~~L~~~ 417 (531)
...++......++|++.|++.
T Consensus 325 ~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 325 NFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred CcHHHHHHHHHHHHHHHHHHhc
Confidence 122344445678899999875
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=95.96 E-value=0.15 Score=52.52 Aligned_cols=148 Identities=18% Similarity=0.213 Sum_probs=89.1
Q ss_pred EEeCChHHHHH--HHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE---eCC----CCHHHHHHhccCCC-cE
Q 009604 219 VIMASGMSAST--VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV---IDP----ADMEGLEAALNNNN-VS 288 (531)
Q Consensus 219 i~~sSG~~Ai~--~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~---vd~----~d~e~Le~al~~~~-tk 288 (531)
+-+-||+.|+. ..+.+..-++..|.+++|+++..... ....|+++.+ .+. .|.+.+.+.+.+.. -.
T Consensus 124 vQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~i----f~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs 199 (427)
T KOG1411|consen 124 VQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNI----FKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGS 199 (427)
T ss_pred EEeccCcchhhHHHHHHHhhccccceeecCCcccccCcc----ccccCcceeeeeeccccccccchHHHHHHHhcCCCCc
Confidence 33446665544 44455556789999999999875533 3444665543 343 25554444443221 12
Q ss_pred EEEE-eCCCCCCCcccC---HHHHHHHHHhcCCEEEEeCCCCCCccccc----------cccCCc-EEEECCccccccCC
Q 009604 289 LFFT-ESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGAD-LVLHSATKFIGGHN 353 (531)
Q Consensus 289 lV~l-esP~NPtG~v~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~~----------l~~gaD-ivv~S~sK~lgg~g 353 (531)
.|++ ...+||||.-.- .++|.++.++.+..-+.|-+|..+...+. ++.|.+ +++.|+.|.+|--|
T Consensus 200 ~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYg 279 (427)
T KOG1411|consen 200 IILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYG 279 (427)
T ss_pred EEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhh
Confidence 3333 456799997654 56788888999999999999654332111 123444 67899999999887
Q ss_pred CceEEE--EEeChHHHHHH
Q 009604 354 DVLAGS--ISGSGKLVTQI 370 (531)
Q Consensus 354 ~v~gG~--iv~~~~li~~l 370 (531)
.+.|.+ ++.+.+...++
T Consensus 280 ERvGa~svvc~~ad~A~rV 298 (427)
T KOG1411|consen 280 ERVGALSVVCKDADEAKRV 298 (427)
T ss_pred hccceeEEEecCHHHHHHH
Confidence 765443 22344444443
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=94.14 E-value=0.063 Score=49.67 Aligned_cols=38 Identities=18% Similarity=0.399 Sum_probs=32.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccc
Q 009604 214 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRK 251 (531)
Q Consensus 214 g~e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~ 251 (531)
..+++++++++++|+.+++.+++.|||.|+++.|.|.+
T Consensus 116 ~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 116 DADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred chhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 45666677666799999999999999999999999964
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=93.85 E-value=0.25 Score=49.22 Aligned_cols=98 Identities=16% Similarity=0.262 Sum_probs=61.9
Q ss_pred CHHHHHHhccCCCcEEEEE-eCCCC-CCCccc-CHHHHHHHHHhcCCEEEEeCCCCCCcc------ccccccC-CcEEEE
Q 009604 274 DMEGLEAALNNNNVSLFFT-ESPTN-PFLRCV-DVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-ADLVLH 343 (531)
Q Consensus 274 d~e~Le~al~~~~tklV~l-esP~N-PtG~v~-dl~~I~~la~~~gi~lIvD~a~a~~~~------~~~l~~g-aDivv~ 343 (531)
|++++++.+.+.....|++ .+-++ ..-+.. .+++|+.+|..|+++-+|.++|+..-. ....+.| +|.++.
T Consensus 142 dleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vq 221 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQ 221 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHH
Confidence 7788888776533343333 22211 112333 389999999999999999999975321 1112233 688999
Q ss_pred CCccccccCCCceEEEEEe--ChHHHHHHHHHh
Q 009604 344 SATKFIGGHNDVLAGSISG--SGKLVTQIRNLH 374 (531)
Q Consensus 344 S~sK~lgg~g~v~gG~iv~--~~~li~~l~~~~ 374 (531)
|+.|.|--+ +||+++. ++.+++.+.+..
T Consensus 222 sldknf~vp---vggaiia~fk~n~iq~iak~y 251 (432)
T KOG3843|consen 222 SLDKNFMVP---VGGAIIAAFKDNFIQEIAKMY 251 (432)
T ss_pred Hhhhcceee---cchhHhhHhHHHHHHHHHHhC
Confidence 999998754 3677664 445666655443
No 395
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=85.61 E-value=2.3 Score=36.88 Aligned_cols=88 Identities=18% Similarity=0.249 Sum_probs=59.1
Q ss_pred HHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhc--CCEEEEeCCCCCCcc
Q 009604 254 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN 330 (531)
Q Consensus 254 ~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~--gi~lIvD~a~a~~~~ 330 (531)
..+...+++.|.++.++|.. +.+++.+.+.+.++++|.+.... +.......++++..++. ++++++=..+.+..+
T Consensus 18 ~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~~~ 95 (121)
T PF02310_consen 18 LYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHATADP 95 (121)
T ss_dssp HHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSSGHHH
T ss_pred HHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCchhcCh
Confidence 34556678889999998765 46788777755457888885543 33444567777777776 789998777665544
Q ss_pred ccccc--cCCcEEEE
Q 009604 331 QKALS--LGADLVLH 343 (531)
Q Consensus 331 ~~~l~--~gaDivv~ 343 (531)
...+. .++|.++.
T Consensus 96 ~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 96 EEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHTSEEEEE
T ss_pred HHHhccCcCcceecC
Confidence 44443 57887664
No 396
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=80.34 E-value=8.5 Score=33.40 Aligned_cols=90 Identities=13% Similarity=0.066 Sum_probs=55.6
Q ss_pred HHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhc---CCEEEEeCCCCCCc
Q 009604 254 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATPL 329 (531)
Q Consensus 254 ~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~---gi~lIvD~a~a~~~ 329 (531)
.++..+++..|.++.+.... .++++.+.+.+.++.+|.++.-. +-...++.++.+.+++. ++.+++=.......
T Consensus 17 ~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~ 94 (119)
T cd02067 17 NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRD 94 (119)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECCCCChh
Confidence 44556788889999876543 56777776665567888884432 22345667777777765 46666644433322
Q ss_pred cccccccCCcEEEECC
Q 009604 330 NQKALSLGADLVLHSA 345 (531)
Q Consensus 330 ~~~~l~~gaDivv~S~ 345 (531)
.......|+|.++...
T Consensus 95 ~~~~~~~G~D~~~~~~ 110 (119)
T cd02067 95 FKFLKEIGVDAYFGPA 110 (119)
T ss_pred HHHHHHcCCeEEECCH
Confidence 2234456888777543
No 397
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=71.68 E-value=28 Score=36.65 Aligned_cols=56 Identities=14% Similarity=0.116 Sum_probs=38.7
Q ss_pred CHHHHHHhc----cCCCcEEEEEeC-----CCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc
Q 009604 274 DMEGLEAAL----NNNNVSLFFTES-----PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 329 (531)
Q Consensus 274 d~e~Le~al----~~~~tklV~les-----P~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~ 329 (531)
+++++..++ ...+..+++++. -+..+-...|+..|..+-+..++++|+|-+++.+.
T Consensus 220 t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 220 TIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 555554443 233457888766 22333467899999998777799999999998764
No 398
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=68.77 E-value=29 Score=33.56 Aligned_cols=92 Identities=23% Similarity=0.222 Sum_probs=52.5
Q ss_pred ChHHHHHHHHHHhccCCCEEEE-cCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 223 SGMSASTVMLLALVPAGGHIVT-TTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv-~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
+|..+- .++.+|++++-+|.+ .++. ..... ..++..|+++...|..|.+.|.++++. ...|++..+.+....
T Consensus 7 tG~~G~-~v~~~L~~~~~~V~~l~R~~---~~~~~-~~l~~~g~~vv~~d~~~~~~l~~al~g--~d~v~~~~~~~~~~~ 79 (233)
T PF05368_consen 7 TGNQGR-SVVRALLSAGFSVRALVRDP---SSDRA-QQLQALGAEVVEADYDDPESLVAALKG--VDAVFSVTPPSHPSE 79 (233)
T ss_dssp TSHHHH-HHHHHHHHTTGCEEEEESSS---HHHHH-HHHHHTTTEEEES-TT-HHHHHHHHTT--CSEEEEESSCSCCCH
T ss_pred ccHHHH-HHHHHHHhCCCCcEEEEecc---chhhh-hhhhcccceEeecccCCHHHHHHHHcC--CceEEeecCcchhhh
Confidence 465332 233444445554433 3333 11122 234556999988899999999999975 566676666543233
Q ss_pred ccCHHHHHHHHHhcCCEEEE
Q 009604 302 CVDVKLVSDLCHKKGAIVCI 321 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIv 321 (531)
..-...|++.|++.|+..++
T Consensus 80 ~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 80 LEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhhHHHhhhccccceEE
Confidence 33356788888888765444
No 399
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=66.70 E-value=24 Score=37.36 Aligned_cols=83 Identities=18% Similarity=0.113 Sum_probs=57.4
Q ss_pred HHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCccc-----CHHHHHHHHHhcCCEEEEeCCCCCCcc
Q 009604 256 IETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATPLN 330 (531)
Q Consensus 256 ~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~-----dl~~I~~la~~~gi~lIvD~a~a~~~~ 330 (531)
++.+-+..+.++..-+..+.++.+.+++-. .+.|++. |--|+-. +++.+.++.+..++.||+|.-.-.+..
T Consensus 228 i~~ir~~~~~pviiKgV~~~eda~~a~~~G-~d~I~VS---nhGGrqld~~~~~~~~L~ei~~~~~~~vi~dGGIr~g~D 303 (361)
T cd04736 228 LRWLRDLWPHKLLVKGIVTAEDAKRCIELG-ADGVILS---NHGGRQLDDAIAPIEALAEIVAATYKPVLIDSGIRRGSD 303 (361)
T ss_pred HHHHHHhCCCCEEEecCCCHHHHHHHHHCC-cCEEEEC---CCCcCCCcCCccHHHHHHHHHHHhCCeEEEeCCCCCHHH
Confidence 333334445555545667888888888774 8899874 4445444 488888888888999999987655432
Q ss_pred -ccccccCCcEEE
Q 009604 331 -QKALSLGADLVL 342 (531)
Q Consensus 331 -~~~l~~gaDivv 342 (531)
.+.+.+|+|.|.
T Consensus 304 v~KALaLGA~aV~ 316 (361)
T cd04736 304 IVKALALGANAVL 316 (361)
T ss_pred HHHHHHcCCCEEE
Confidence 466778888765
No 400
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=66.59 E-value=41 Score=28.96 Aligned_cols=87 Identities=13% Similarity=0.065 Sum_probs=54.3
Q ss_pred HHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC---CHHHHHHhccC-CCcEEEEEeCCC--CCCCc
Q 009604 228 STVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---DMEGLEAALNN-NNVSLFFTESPT--NPFLR 301 (531)
Q Consensus 228 i~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~---d~e~Le~al~~-~~tklV~lesP~--NPtG~ 301 (531)
+...+..+..-|=+|+.+ .+|..++ +..|+++..+... .-.++.+.|.+ ++..+|+. .|+ +....
T Consensus 14 ~~~~a~~l~~~G~~i~AT----~gTa~~L----~~~Gi~~~~v~~~~~~g~~~i~~~i~~~g~idlVIn-~~~~~~~~~~ 84 (112)
T cd00532 14 LVDLAPKLSSDGFPLFAT----GGTSRVL----ADAGIPVRAVSKRHEDGEPTVDAAIAEKGKFDVVIN-LRDPRRDRCT 84 (112)
T ss_pred HHHHHHHHHHCCCEEEEC----cHHHHHH----HHcCCceEEEEecCCCCCcHHHHHHhCCCCEEEEEE-cCCCCccccc
Confidence 334445555667778766 3555444 4468877665321 12456667776 66777764 343 21123
Q ss_pred ccCHHHHHHHHHhcCCEEEEeC
Q 009604 302 CVDVKLVSDLCHKKGAIVCIDG 323 (531)
Q Consensus 302 v~dl~~I~~la~~~gi~lIvD~ 323 (531)
..|-..|.+.|-+++++++.+-
T Consensus 85 ~~dg~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 85 DEDGTALLRLARLYKIPVTTPN 106 (112)
T ss_pred CCChHHHHHHHHHcCCCEEECH
Confidence 5568899999999999998763
No 401
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=62.35 E-value=47 Score=35.14 Aligned_cols=85 Identities=21% Similarity=0.219 Sum_probs=52.1
Q ss_pred HHHHhhcccCCcEEEEeCC--CCHHHHHHhcc----CCCcEEEEEe-CCCC-C--CCcccCHHHHHHHHHhcCCEEEEeC
Q 009604 254 IFIETVLPKMGITATVIDP--ADMEGLEAALN----NNNVSLFFTE-SPTN-P--FLRCVDVKLVSDLCHKKGAIVCIDG 323 (531)
Q Consensus 254 ~~~~~~l~~~Gi~v~~vd~--~d~e~Le~al~----~~~tklV~le-sP~N-P--tG~v~dl~~I~~la~~~gi~lIvD~ 323 (531)
.+++. +...|.+|..-.. .++++++.++. .++.++++++ ..++ | +-...|+..|..+-+.++++|++|-
T Consensus 216 ~LL~~-~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~ 294 (360)
T PRK12595 216 ELLKA-AGRVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDV 294 (360)
T ss_pred HHHHH-HHccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeC
Confidence 44433 3445666554333 36666665542 2335677776 2222 2 2334699999998888999999999
Q ss_pred CCCCC---cc----ccccccCCc
Q 009604 324 TFATP---LN----QKALSLGAD 339 (531)
Q Consensus 324 a~a~~---~~----~~~l~~gaD 339 (531)
.+..+ +. .....+|+|
T Consensus 295 ~Hs~G~r~~~~~~a~aAva~GAd 317 (360)
T PRK12595 295 THSTGRRDLLLPTAKAALAIGAD 317 (360)
T ss_pred CCCCcchhhHHHHHHHHHHcCCC
Confidence 98766 21 224567887
No 402
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=59.37 E-value=74 Score=31.91 Aligned_cols=44 Identities=14% Similarity=0.116 Sum_probs=31.7
Q ss_pred CcEEEEEe-C---CCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc
Q 009604 286 NVSLFFTE-S---PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 329 (531)
Q Consensus 286 ~tklV~le-s---P~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~ 329 (531)
+.++++++ . -.+++-...|+..|..+-+..+.+|++|-++..+.
T Consensus 150 n~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 150 KSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 35677776 1 12344447899999888887899999999987653
No 403
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=58.31 E-value=41 Score=29.41 Aligned_cols=82 Identities=15% Similarity=0.151 Sum_probs=49.3
Q ss_pred hhcccCCcEEEEeCCCCHHHHHHhccC-CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcC--CEEEEeCCCCCCcccc-c
Q 009604 258 TVLPKMGITATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQK-A 333 (531)
Q Consensus 258 ~~l~~~Gi~v~~vd~~d~e~Le~al~~-~~tklV~lesP~NPtG~v~dl~~I~~la~~~g--i~lIvD~a~a~~~~~~-~ 333 (531)
..++..|.++...+....+...+.+.. .+.++|.+.. .+.......++++..|+.+ +++++=..+.+..+.. .
T Consensus 10 a~l~~~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~---~~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t~~p~~~~ 86 (127)
T cd02068 10 AVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISL---MTSAIYEALELAKIAKEVLPNVIVVVGGPHATFFPEEIL 86 (127)
T ss_pred HHHHHCCCeeeecCCCCHHHHHHHHHHhcCCCEEEEee---ccccHHHHHHHHHHHHHHCCCCEEEECCcchhhCHHHHh
Confidence 456666888777776666655555543 3478888743 2333335677888888764 8888866665543332 1
Q ss_pred cccCCcEEE
Q 009604 334 LSLGADLVL 342 (531)
Q Consensus 334 l~~gaDivv 342 (531)
...++|+++
T Consensus 87 ~~~~~D~vv 95 (127)
T cd02068 87 EEPGVDFVV 95 (127)
T ss_pred cCCCCCEEE
Confidence 223455554
No 404
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=55.43 E-value=27 Score=38.47 Aligned_cols=83 Identities=17% Similarity=0.168 Sum_probs=54.3
Q ss_pred hhcccCC-cEEEEeCCC----CHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhc--CCEEEEeCCCCCCcc
Q 009604 258 TVLPKMG-ITATVIDPA----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN 330 (531)
Q Consensus 258 ~~l~~~G-i~v~~vd~~----d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~--gi~lIvD~a~a~~~~ 330 (531)
..++..| .+|.++|.. +.+++.+.+.+.++.+|.+... |.......++++.+++. ++++|+=..+.+...
T Consensus 30 a~L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~~~ 106 (497)
T TIGR02026 30 GALLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPTFMF 106 (497)
T ss_pred HHHHhcCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCcCH
Confidence 3455667 577777642 5677777776545788888432 33444566788888876 899999888776655
Q ss_pred ccccc--cCCcEEEE
Q 009604 331 QKALS--LGADLVLH 343 (531)
Q Consensus 331 ~~~l~--~gaDivv~ 343 (531)
...+. -++|+++.
T Consensus 107 ~~~l~~~p~vD~Vv~ 121 (497)
T TIGR02026 107 HQVLTEAPWIDFIVR 121 (497)
T ss_pred HHHHhcCCCccEEEe
Confidence 44442 25787765
No 405
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=55.31 E-value=2.1e+02 Score=28.18 Aligned_cols=109 Identities=18% Similarity=0.300 Sum_probs=57.9
Q ss_pred HHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEE--EeCCCCHHHHHHhccCCCcEEEEEeCCCCC--CCccc-
Q 009604 230 VMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITAT--VIDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCV- 303 (531)
Q Consensus 230 ~al~all~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~--~vd~~d~e~Le~al~~~~tklV~lesP~NP--tG~v~- 303 (531)
-.+..+.+.| |.|.+..-...-..+.+ +..+..|++.- +-+...++.++..+.. ..+|.+.+.+ | .|.-.
T Consensus 75 ~~i~~fa~agad~It~H~E~~~~~~r~i-~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~--vD~VllMsVn-PGfgGQ~Fi 150 (220)
T COG0036 75 RYIEAFAKAGADIITFHAEATEHIHRTI-QLIKELGVKAGLVLNPATPLEALEPVLDD--VDLVLLMSVN-PGFGGQKFI 150 (220)
T ss_pred HHHHHHHHhCCCEEEEEeccCcCHHHHH-HHHHHcCCeEEEEECCCCCHHHHHHHHhh--CCEEEEEeEC-CCCcccccC
Confidence 3445666677 44444322222233344 33455566543 3355678888888865 6777776654 4 23332
Q ss_pred C--HHHHHH---HHHhc-CCEEEEeCCCCCCccccccccCCcEEE
Q 009604 304 D--VKLVSD---LCHKK-GAIVCIDGTFATPLNQKALSLGADLVL 342 (531)
Q Consensus 304 d--l~~I~~---la~~~-gi~lIvD~a~a~~~~~~~l~~gaDivv 342 (531)
| +++|.+ +..+. ++.+-+|.-..........+.|+|+++
T Consensus 151 ~~~l~Ki~~lr~~~~~~~~~~IeVDGGI~~~t~~~~~~AGad~~V 195 (220)
T COG0036 151 PEVLEKIRELRAMIDERLDILIEVDGGINLETIKQLAAAGADVFV 195 (220)
T ss_pred HHHHHHHHHHHHHhcccCCeEEEEeCCcCHHHHHHHHHcCCCEEE
Confidence 1 444444 34332 567778865432222233457999877
No 406
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=54.01 E-value=56 Score=34.11 Aligned_cols=131 Identities=18% Similarity=0.228 Sum_probs=80.9
Q ss_pred HHHHHHHHHhccCCCEEEE-cCCCccc-hHHHHHhhcccCCcEEEEe-CCCCH-----HHHHHhccCCCcEEEEEeCCC-
Q 009604 226 SASTVMLLALVPAGGHIVT-TTDCYRK-TRIFIETVLPKMGITATVI-DPADM-----EGLEAALNNNNVSLFFTESPT- 296 (531)
Q Consensus 226 ~Ai~~al~all~pGD~VIv-~~~~y~~-t~~~~~~~l~~~Gi~v~~v-d~~d~-----e~Le~al~~~~tklV~lesP~- 296 (531)
..|.-+..-+.+.|-.|++ ..++|.. ....++.+.++.|+++..- ...|+ ++++.+..++ ..+|++.+..
T Consensus 154 TTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~-~DvvliDTAGR 232 (340)
T COG0552 154 TTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARG-IDVVLIDTAGR 232 (340)
T ss_pred hHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcC-CCEEEEeCccc
Confidence 4555555556677876655 4455543 3445556677889887653 23454 5677777664 8999997763
Q ss_pred --CCCCcccCHHHHHHHHHhcC------CEEEEeCCCCCCccccc----cccCCcEEEECCccccccCCCceEEEEEe
Q 009604 297 --NPFLRCVDVKLVSDLCHKKG------AIVCIDGTFATPLNQKA----LSLGADLVLHSATKFIGGHNDVLAGSISG 362 (531)
Q Consensus 297 --NPtG~v~dl~~I~~la~~~g------i~lIvD~a~a~~~~~~~----l~~gaDivv~S~sK~lgg~g~v~gG~iv~ 362 (531)
|-..-+-.|++|.+++++.. +++++|.+.+.-..... -..+.|-++ +||.=|. ..||+++.
T Consensus 233 Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiI--lTKlDgt---AKGG~il~ 305 (340)
T COG0552 233 LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGII--LTKLDGT---AKGGIILS 305 (340)
T ss_pred ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEE--EEecccC---CCcceeee
Confidence 44444556888888888754 77888999764322111 123456555 6786543 34787764
No 407
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=53.70 E-value=53 Score=28.75 Aligned_cols=92 Identities=14% Similarity=0.073 Sum_probs=53.3
Q ss_pred HHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhc---CCEEEEeCCCCCC
Q 009604 253 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATP 328 (531)
Q Consensus 253 ~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~---gi~lIvD~a~a~~ 328 (531)
..++..+++..|.++.+.... .++++.+++.+.+..+|.++.... -....++++.+..++. ++.+++=......
T Consensus 16 ~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~--~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~ 93 (122)
T cd02071 16 AKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSG--GHMTLFPEVIELLRELGAGDILVVGGGIIPPE 93 (122)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccch--hhHHHHHHHHHHHHhcCCCCCEEEEECCCCHH
Confidence 345556688889999887654 566776665554578888855542 2333467777777765 4566654332111
Q ss_pred ccccccccCCcEEEECCc
Q 009604 329 LNQKALSLGADLVLHSAT 346 (531)
Q Consensus 329 ~~~~~l~~gaDivv~S~s 346 (531)
........|.|-+++..+
T Consensus 94 ~~~~~~~~G~d~~~~~~~ 111 (122)
T cd02071 94 DYELLKEMGVAEIFGPGT 111 (122)
T ss_pred HHHHHHHCCCCEEECCCC
Confidence 111223457776665433
No 408
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=53.30 E-value=1.1e+02 Score=26.17 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=30.7
Q ss_pred cccCCcEEEEeCCCC-HHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEE
Q 009604 260 LPKMGITATVIDPAD-MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 320 (531)
Q Consensus 260 l~~~Gi~v~~vd~~d-~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lI 320 (531)
+...|..+..++..+ .......++++ ..+|++ +..|...++-++++.++++|+.++
T Consensus 35 l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i----S~~g~~~~~~~~~~~a~~~g~~iv 91 (139)
T cd05013 35 LLRLGKPVVLLSDPHLQLMSAANLTPG-DVVIAI----SFSGETKETVEAAEIAKERGAKVI 91 (139)
T ss_pred HHHcCCceEEecCHHHHHHHHHcCCCC-CEEEEE----eCCCCCHHHHHHHHHHHHcCCeEE
Confidence 444565555543221 11122234443 455554 345666777788899999987654
No 409
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=53.29 E-value=1.6e+02 Score=29.18 Aligned_cols=107 Identities=18% Similarity=0.185 Sum_probs=54.8
Q ss_pred HHHhccCC-CEEEEcCCCccchHHHHHhhcccCCc--EEE--EeCCCCHHHHHHhccCCCcEEEEEeCCCCC--CCcccC
Q 009604 232 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGI--TAT--VIDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCVD 304 (531)
Q Consensus 232 l~all~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi--~v~--~vd~~d~e~Le~al~~~~tklV~lesP~NP--tG~v~d 304 (531)
+..+.+.| |.|.+.--.-......+ ..++..|. +.- .-+...++.++..+.. ...|.+.+. || .|.-+-
T Consensus 84 i~~~~~aGad~It~H~Ea~~~~~~~l-~~Ik~~g~~~kaGlalnP~Tp~~~i~~~l~~--vD~VLiMtV-~PGfgGQ~f~ 159 (228)
T PRK08091 84 AKACVAAGADIVTLQVEQTHDLALTI-EWLAKQKTTVLIGLCLCPETPISLLEPYLDQ--IDLIQILTL-DPRTGTKAPS 159 (228)
T ss_pred HHHHHHhCCCEEEEcccCcccHHHHH-HHHHHCCCCceEEEEECCCCCHHHHHHHHhh--cCEEEEEEE-CCCCCCcccc
Confidence 34455556 55554332111122333 23455555 432 2244678888888864 455555444 23 243332
Q ss_pred ---HHH---HHHHHHhcC--CEEEEeCCCCCCccccccccCCcEEE
Q 009604 305 ---VKL---VSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVL 342 (531)
Q Consensus 305 ---l~~---I~~la~~~g--i~lIvD~a~a~~~~~~~l~~gaDivv 342 (531)
+++ +.++.+++| ..+-+|.--...-.....+.|+|+++
T Consensus 160 ~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGaD~~V 205 (228)
T PRK08091 160 DLILDRVIQVENRLGNRRVEKLISIDGSMTLELASYLKQHQIDWVV 205 (228)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCCEEE
Confidence 334 444445554 67889976433222334567999776
No 410
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=51.19 E-value=1e+02 Score=31.10 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=34.4
Q ss_pred CEEEEcCCCccchHHHHHhhcccCCcEEEE-eCCC-CHHHHHHhccCCCcEEEEEeCCCCCCCccc----CHHHHHHHHH
Q 009604 240 GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCH 313 (531)
Q Consensus 240 D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~-vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~v~----dl~~I~~la~ 313 (531)
|-|++++.-+.-...++ ..++..|+...+ +.+. ..+.++...+.. ...||+-+-...||.-. +++++.+..+
T Consensus 121 dgviipDLP~ee~~~~~-~~~~~~gi~~I~lv~PtT~~eri~~i~~~a-~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir 198 (263)
T CHL00200 121 KGLIIPDLPYEESDYLI-SVCNLYNIELILLIAPTSSKSRIQKIARAA-PGCIYLVSTTGVTGLKTELDKKLKKLIETIK 198 (263)
T ss_pred eEEEecCCCHHHHHHHH-HHHHHcCCCEEEEECCCCCHHHHHHHHHhC-CCcEEEEcCCCCCCCCccccHHHHHHHHHHH
Confidence 45555554433222222 334555554433 2222 234444443321 23555544444555532 2344444444
Q ss_pred hc-CCEEEEe
Q 009604 314 KK-GAIVCID 322 (531)
Q Consensus 314 ~~-gi~lIvD 322 (531)
++ +.++++|
T Consensus 199 ~~t~~Pi~vG 208 (263)
T CHL00200 199 KMTNKPIILG 208 (263)
T ss_pred HhcCCCEEEE
Confidence 33 5555553
No 411
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=51.14 E-value=1.4e+02 Score=31.33 Aligned_cols=124 Identities=19% Similarity=0.163 Sum_probs=68.1
Q ss_pred EEeCChH-HHHHHHHHHhccCC---CEEEEcCCCccchHHHHHh--hcc-cC-CcEEEEeCCCCHHHHHHhccCCCcEEE
Q 009604 219 VIMASGM-SASTVMLLALVPAG---GHIVTTTDCYRKTRIFIET--VLP-KM-GITATVIDPADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 219 i~~sSG~-~Ai~~al~all~pG---D~VIv~~~~y~~t~~~~~~--~l~-~~-Gi~v~~vd~~d~e~Le~al~~~~tklV 290 (531)
+..+.|+ ..-.--+..|++.| |.|++ +..|+-....++. .++ .+ +..+.-=+..+++..+++++.. ...|
T Consensus 98 ~~vsvG~~~~d~er~~~L~~a~~~~d~ivi-D~AhGhs~~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li~aG-AD~i 175 (343)
T TIGR01305 98 VAVSSGSSDNDLEKMTSILEAVPQLKFICL-DVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSG-ADIV 175 (343)
T ss_pred EEEEeccCHHHHHHHHHHHhcCCCCCEEEE-ECCCCcHHHHHHHHHHHHhhCCCCeEEEecccCHHHHHHHHHcC-CCEE
Confidence 4446665 33333445565554 54444 4566544333321 122 22 3444333456788888888764 6666
Q ss_pred EEe-CCC-CCCCc-----c-cCH---HHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEEEC
Q 009604 291 FTE-SPT-NPFLR-----C-VDV---KLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 344 (531)
Q Consensus 291 ~le-sP~-NPtG~-----v-~dl---~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv~S 344 (531)
.+. .|. |-+++ . ..+ .++++.++++++++|.|.-.-.+ -..+.+.+|+|.|+-.
T Consensus 176 kVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGIr~~gDI~KALA~GAd~VMlG 241 (343)
T TIGR01305 176 KVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLG 241 (343)
T ss_pred EEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCcCchhHHHHHHHcCCCEEEEC
Confidence 653 121 22333 2 224 45555566778999999875433 3356788999988743
No 412
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=50.72 E-value=1.5e+02 Score=27.76 Aligned_cols=105 Identities=13% Similarity=0.189 Sum_probs=55.3
Q ss_pred CcEEEeC-ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeC
Q 009604 216 ESTVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTES 294 (531)
Q Consensus 216 e~~i~~s-SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~les 294 (531)
..+++++ +|..+-.. ...+.+.|.+|++..........+...+-...+.++...+..+.+++.+.+.+ ..+|+..+
T Consensus 29 ~~vlVlGgtG~iG~~~-a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~diVi~at 105 (194)
T cd01078 29 KTAVVLGGTGPVGQRA-AVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG--ADVVFAAG 105 (194)
T ss_pred CEEEEECCCCHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc--CCEEEECC
Confidence 4567776 47654332 33455667666654333222222222222234666666777788888888864 56777755
Q ss_pred CCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc
Q 009604 295 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 329 (531)
Q Consensus 295 P~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~ 329 (531)
|. |...+ .+.+... ....+++|-.+....
T Consensus 106 ~~---g~~~~--~~~~~~~-~~~~vv~D~~~~~~~ 134 (194)
T cd01078 106 AA---GVELL--EKLAWAP-KPLAVAADVNAVPPV 134 (194)
T ss_pred CC---Cceec--hhhhccc-CceeEEEEccCCCCC
Confidence 54 33211 1111111 125689998876543
No 413
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=50.34 E-value=1.3e+02 Score=27.46 Aligned_cols=88 Identities=13% Similarity=0.070 Sum_probs=53.2
Q ss_pred HHHHHHHhccC--CCEEEEcCCCccchHHHHHhhcccC-CcEEEEeCCC---CHHHHHHhccCCCcEEEEEeCC--CCCC
Q 009604 228 STVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKM-GITATVIDPA---DMEGLEAALNNNNVSLFFTESP--TNPF 299 (531)
Q Consensus 228 i~~al~all~p--GD~VIv~~~~y~~t~~~~~~~l~~~-Gi~v~~vd~~---d~e~Le~al~~~~tklV~lesP--~NPt 299 (531)
+...+..+.+- |=+|+.+ .+|-.+ ++.. |+++..+-.. .-.++.+.|.+++..+|+. .| ..+.
T Consensus 19 l~~~a~~l~~ll~Gf~l~AT----~gTa~~----L~~~~Gi~v~~vi~~~~gg~~~i~~~I~~g~i~lVIn-t~dp~~~~ 89 (142)
T PRK05234 19 LVAWVKAHKDLLEQHELYAT----GTTGGL----IQEATGLDVTRLLSGPLGGDQQIGALIAEGKIDMLIF-FRDPLTAQ 89 (142)
T ss_pred HHHHHHHHHHHhcCCEEEEe----ChHHHH----HHhccCCeeEEEEcCCCCCchhHHHHHHcCceeEEEE-ecCCCCCC
Confidence 33344444444 6667655 345433 3445 7776655111 1255777777766777654 34 4444
Q ss_pred CcccCHHHHHHHHHhcCCEEEEeCC
Q 009604 300 LRCVDVKLVSDLCHKKGAIVCIDGT 324 (531)
Q Consensus 300 G~v~dl~~I~~la~~~gi~lIvD~a 324 (531)
+...|...|.+.|-++|++++..-.
T Consensus 90 ~~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 90 PHDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred cccchHHHHHHHHHHcCCCEEcCHH
Confidence 4356888999999999999986543
No 414
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=50.08 E-value=72 Score=28.59 Aligned_cols=72 Identities=15% Similarity=0.048 Sum_probs=45.4
Q ss_pred CccchHHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcC---CEEEE
Q 009604 248 CYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCI 321 (531)
Q Consensus 248 ~y~~t~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~g---i~lIv 321 (531)
.|.--..++...++..|.+|.....+ +++++.++..+.+..+|.+++-. +.....++++.+..++.| +++++
T Consensus 14 ~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~~L~~~g~~~i~viv 89 (132)
T TIGR00640 14 GHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKLGRPDILVVV 89 (132)
T ss_pred ccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 45444566667788889999876643 56665444433358888885544 333444778888777753 45555
No 415
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=49.59 E-value=87 Score=34.75 Aligned_cols=109 Identities=20% Similarity=0.186 Sum_probs=66.5
Q ss_pred HHhccCCCEEEEcCCCccchHH---HHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCcEEEEEeC-CC----CC--C--
Q 009604 233 LALVPAGGHIVTTTDCYRKTRI---FIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTES-PT----NP--F-- 299 (531)
Q Consensus 233 ~all~pGD~VIv~~~~y~~t~~---~~~~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~les-P~----NP--t-- 299 (531)
.+|++.|-.||+-+..++-... .++.+-+.+ +..+..-+..+.++-+.+++.. ..+|.+.. +. ++ +
T Consensus 254 ~~l~~ag~d~i~iD~~~g~~~~~~~~i~~ik~~~p~~~vi~g~v~t~e~a~~a~~aG-aD~i~vg~g~G~~~~t~~~~~~ 332 (505)
T PLN02274 254 EHLVKAGVDVVVLDSSQGDSIYQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQAG-VDGLRVGMGSGSICTTQEVCAV 332 (505)
T ss_pred HHHHHcCCCEEEEeCCCCCcHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHcC-cCEEEECCCCCccccCcccccc
Confidence 4566667555555556654333 333222223 4555444667888888888764 67776521 11 11 1
Q ss_pred Cc--ccCHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEE
Q 009604 300 LR--CVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 342 (531)
Q Consensus 300 G~--v~dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv 342 (531)
|. ..++..+.+++++.+++||.|.-...+ -..+.+.+|+|.|+
T Consensus 333 g~~~~~~i~~~~~~~~~~~vpVIadGGI~~~~di~kAla~GA~~V~ 378 (505)
T PLN02274 333 GRGQATAVYKVASIAAQHGVPVIADGGISNSGHIVKALTLGASTVM 378 (505)
T ss_pred CCCcccHHHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 22 235777888999999999999876554 33567788999765
No 416
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=48.35 E-value=83 Score=24.86 Aligned_cols=53 Identities=13% Similarity=0.131 Sum_probs=30.4
Q ss_pred CcEEEEeCCCCHHHHH--HhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEE
Q 009604 264 GITATVIDPADMEGLE--AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 321 (531)
Q Consensus 264 Gi~v~~vd~~d~e~Le--~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIv 321 (531)
|.++..++.......+ ..++++ .-+|++ +..|...++.++++.++++|+.+|.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~-d~~i~i----S~sg~t~~~~~~~~~a~~~g~~ii~ 79 (87)
T cd04795 25 GIEVVALIATELEHASLLSLLRKG-DVVIAL----SYSGRTEELLAALEIAKELGIPVIA 79 (87)
T ss_pred CCceEEeCCcHHHHHHHHhcCCCC-CEEEEE----ECCCCCHHHHHHHHHHHHcCCeEEE
Confidence 6666555433322222 334443 344444 3446667788889999999877653
No 417
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=47.81 E-value=83 Score=28.80 Aligned_cols=88 Identities=17% Similarity=0.244 Sum_probs=51.2
Q ss_pred EEeC-ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCC
Q 009604 219 VIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 297 (531)
Q Consensus 219 i~~s-SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~N 297 (531)
++++ +|.-+-. ++..|++.|-+|....-.-... +. ..++++...|..|++.+.+++.. ...|+...+.+
T Consensus 2 ~V~GatG~vG~~-l~~~L~~~~~~V~~~~R~~~~~----~~---~~~~~~~~~d~~d~~~~~~al~~--~d~vi~~~~~~ 71 (183)
T PF13460_consen 2 LVFGATGFVGRA-LAKQLLRRGHEVTALVRSPSKA----ED---SPGVEIIQGDLFDPDSVKAALKG--ADAVIHAAGPP 71 (183)
T ss_dssp EEETTTSHHHHH-HHHHHHHTTSEEEEEESSGGGH----HH---CTTEEEEESCTTCHHHHHHHHTT--SSEEEECCHST
T ss_pred EEECCCChHHHH-HHHHHHHCCCEEEEEecCchhc----cc---ccccccceeeehhhhhhhhhhhh--cchhhhhhhhh
Confidence 3444 4554443 3455666665555432221111 11 56888888899999999999985 45565544332
Q ss_pred CCCcccCHHHHHHHHHhcCC
Q 009604 298 PFLRCVDVKLVSDLCHKKGA 317 (531)
Q Consensus 298 PtG~v~dl~~I~~la~~~gi 317 (531)
+. .....+.+.+.|++.|+
T Consensus 72 ~~-~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 72 PK-DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp TT-HHHHHHHHHHHHHHTTS
T ss_pred cc-ccccccccccccccccc
Confidence 22 23335677777777664
No 418
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=46.85 E-value=57 Score=32.70 Aligned_cols=93 Identities=16% Similarity=0.217 Sum_probs=53.6
Q ss_pred EEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCC
Q 009604 219 VIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 297 (531)
Q Consensus 219 i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~N 297 (531)
|++=+|| ++..++=.-...+++.++.+...|+... +...+- .+.....+.+.|.+.|+++++++++= .++
T Consensus 5 ilvlGGT~Dar~la~~L~~~~~~~~~ss~t~~g~~l------~~~~~~-~~~~G~l~~e~l~~~l~e~~i~llID--ATH 75 (257)
T COG2099 5 ILLLGGTSDARALAKKLAAAPVDIILSSLTGYGAKL------AEQIGP-VRVGGFLGAEGLAAFLREEGIDLLID--ATH 75 (257)
T ss_pred EEEEeccHHHHHHHHHhhccCccEEEEEcccccccc------hhccCC-eeecCcCCHHHHHHHHHHcCCCEEEE--CCC
Confidence 4444555 6665543333345688888888887732 233232 33344567788888887766666652 445
Q ss_pred CCCcccCHHHHHHHHHhcCCEEEE
Q 009604 298 PFLRCVDVKLVSDLCHKKGAIVCI 321 (531)
Q Consensus 298 PtG~v~dl~~I~~la~~~gi~lIv 321 (531)
|+-..+.- -..++|++.|++.+-
T Consensus 76 PyAa~iS~-Na~~aake~gipy~r 98 (257)
T COG2099 76 PYAARISQ-NAARAAKETGIPYLR 98 (257)
T ss_pred hHHHHHHH-HHHHHHHHhCCcEEE
Confidence 54433322 345677877777654
No 419
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=46.77 E-value=1.9e+02 Score=30.46 Aligned_cols=139 Identities=15% Similarity=0.116 Sum_probs=74.1
Q ss_pred EEeCChH-HHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHh--hcc-cC-CcEEEEeCCCCHHHHHHhccCCCcEEEE
Q 009604 219 VIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFIET--VLP-KM-GITATVIDPADMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 219 i~~sSG~-~Ai~~al~all~--pGD~VIv~~~~y~~t~~~~~~--~l~-~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~ 291 (531)
+..+.|+ +.-.--+..|++ +|-.+|+-+..|+-....++. .++ .+ .+.+.-=+..+.+..+++++.. ...|-
T Consensus 99 ~~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~T~e~a~~Li~aG-AD~vK 177 (346)
T PRK05096 99 VMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILSG-ADIVK 177 (346)
T ss_pred EEEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHcC-CCEEE
Confidence 3446665 332233344544 464444545566554433321 122 22 2444433455788888887653 44442
Q ss_pred -------EeCCCCCCCcccC----HHHHHHHHHhcCCEEEEeCCCC-CCccccccccCCcEEEECCccccccCCCceEEE
Q 009604 292 -------TESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFIGGHNDVLAGS 359 (531)
Q Consensus 292 -------lesP~NPtG~v~d----l~~I~~la~~~gi~lIvD~a~a-~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~ 359 (531)
+|+---.+|.-.| +.+.++.++++|+++|-|.-.- .+-..+.+..|+|.|+ +-..|+|+-...|-+
T Consensus 178 VGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~~sGDI~KAlaaGAd~VM--lGsllAGt~EsPGe~ 255 (346)
T PRK05096 178 VGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVM--LGGMLAGHEESGGEI 255 (346)
T ss_pred EcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcccccHHHHHHHcCCCEEE--eChhhcCcccCCCcE
Confidence 1222233444333 4566677888999999998643 3344567788999887 334455554333333
Q ss_pred E
Q 009604 360 I 360 (531)
Q Consensus 360 i 360 (531)
+
T Consensus 256 ~ 256 (346)
T PRK05096 256 V 256 (346)
T ss_pred E
Confidence 3
No 420
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=46.15 E-value=2.1e+02 Score=28.14 Aligned_cols=107 Identities=17% Similarity=0.157 Sum_probs=54.9
Q ss_pred HHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEE--eCCCCHHHHHHhccCCCcEEEEEeCCCCC--CCccc---
Q 009604 232 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCV--- 303 (531)
Q Consensus 232 l~all~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~--vd~~d~e~Le~al~~~~tklV~lesP~NP--tG~v~--- 303 (531)
+..+.+.| |.|.+.--........+ ..++..|++.-. -+...++.++..+.. ...|.+.+.+ | .|.-+
T Consensus 78 i~~~~~~gad~I~~H~Ea~~~~~~~l-~~Ir~~g~k~GlalnP~T~~~~i~~~l~~--vD~VlvMtV~-PGf~GQ~fi~~ 153 (223)
T PRK08745 78 VPDFADAGATTISFHPEASRHVHRTI-QLIKSHGCQAGLVLNPATPVDILDWVLPE--LDLVLVMSVN-PGFGGQAFIPS 153 (223)
T ss_pred HHHHHHhCCCEEEEcccCcccHHHHH-HHHHHCCCceeEEeCCCCCHHHHHHHHhh--cCEEEEEEEC-CCCCCccccHH
Confidence 34455555 55555432111123333 234555655432 244578888888864 5555554442 3 24333
Q ss_pred CHH---HHHHHHHhc--CCEEEEeCCCCCCccccccccCCcEEE
Q 009604 304 DVK---LVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADLVL 342 (531)
Q Consensus 304 dl~---~I~~la~~~--gi~lIvD~a~a~~~~~~~l~~gaDivv 342 (531)
.++ ++.++.+++ ++.+-+|.--...-.....+.|+|+++
T Consensus 154 ~l~KI~~l~~~~~~~~~~~~IeVDGGI~~eti~~l~~aGaDi~V 197 (223)
T PRK08745 154 ALDKLRAIRKKIDALGKPIRLEIDGGVKADNIGAIAAAGADTFV 197 (223)
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEECCCCHHHHHHHHHcCCCEEE
Confidence 234 444444444 477888875432222334567899877
No 421
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=45.93 E-value=65 Score=27.61 Aligned_cols=66 Identities=21% Similarity=0.270 Sum_probs=46.2
Q ss_pred HHHHHhhcccCCcE-EEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCC
Q 009604 253 RIFIETVLPKMGIT-ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 324 (531)
Q Consensus 253 ~~~~~~~l~~~Gi~-v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a 324 (531)
...++.+.+++|+. +.++.+.--|+-...|+.- +-.|++-.+.+| |++-|..||++.|+++.++.-
T Consensus 22 ~~~v~~i~~~~gI~diN~IKPGIgEaTRvLLRRv-P~~vLVr~~~~p-----d~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 22 WAEVERIAERYGISDINLIKPGIGEATRVLLRRV-PWKVLVRDPDDP-----DLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred HHHHHHHHHHhCCCCcccccCChhHHHHHHHhcC-CCEEEECCCCCc-----cHHHHHHHHHHcCCcEEEeCC
Confidence 34455666777874 4445444456666667664 667777777764 899999999999999987653
No 422
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=45.32 E-value=2.1e+02 Score=24.89 Aligned_cols=75 Identities=16% Similarity=0.212 Sum_probs=46.9
Q ss_pred CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---CCHHHHHHhccCCCcEEEEEeCCC--CCCCcccCHHHHHHHHH
Q 009604 239 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---ADMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCH 313 (531)
Q Consensus 239 GD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---~d~e~Le~al~~~~tklV~lesP~--NPtG~v~dl~~I~~la~ 313 (531)
|=+|..+ .+|..+++. ..|+++..+.. ..-+++.+.+.+++..+|+. +|+ .......|-..|.+.|-
T Consensus 27 Gf~i~AT----~gTa~~L~~---~~Gi~v~~vk~~~~~g~~~i~~~i~~g~i~~VIn-t~~~~~~~~~~~dg~~iRr~a~ 98 (115)
T cd01422 27 RHRLVAT----GTTGLLIQE---ATGLTVNRMKSGPLGGDQQIGALIAEGEIDAVIF-FRDPLTAQPHEPDVKALLRLCD 98 (115)
T ss_pred CCEEEEe----chHHHHHHH---hhCCcEEEEecCCCCchhHHHHHHHcCceeEEEE-cCCCCCCCcccccHHHHHHHHH
Confidence 7777765 355544433 15777665521 22255777777766776653 443 22332568889999999
Q ss_pred hcCCEEEE
Q 009604 314 KKGAIVCI 321 (531)
Q Consensus 314 ~~gi~lIv 321 (531)
+++++++.
T Consensus 99 ~~~Ip~~T 106 (115)
T cd01422 99 VYNIPLAT 106 (115)
T ss_pred HcCCCEEE
Confidence 99998874
No 423
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=44.94 E-value=96 Score=34.33 Aligned_cols=121 Identities=16% Similarity=0.137 Sum_probs=68.9
Q ss_pred EeCChHHHHHHHHHHhccCCCEEEEcCCCccchH---HHHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCcEEEEEe-C
Q 009604 220 IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-S 294 (531)
Q Consensus 220 ~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~---~~~~~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~le-s 294 (531)
..+..-..+ ..+.++++.|-.+|.-+..++.+. ..++.+-+.+ ++.+..-+..+.++.+.+++-. ...|.+. .
T Consensus 235 avg~~~~~~-~~~~~l~~ag~d~i~id~a~G~s~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~aG-ad~I~vg~g 312 (495)
T PTZ00314 235 AISTRPEDI-ERAAALIEAGVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAG-ADGLRIGMG 312 (495)
T ss_pred EECCCHHHH-HHHHHHHHCCCCEEEEecCCCCchHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHcC-CCEEEECCc
Confidence 333333333 334567777755555555555333 2333332232 3444333556788888888764 6777652 2
Q ss_pred CCC------CC--Ccc--cCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEE
Q 009604 295 PTN------PF--LRC--VDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 342 (531)
Q Consensus 295 P~N------Pt--G~v--~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv 342 (531)
|.. .+ |.. ..+.++.++|+++|+++|.|.-..++. ..+.+.+|+|.|+
T Consensus 313 ~Gs~~~t~~~~~~g~p~~~ai~~~~~~~~~~~v~vIadGGi~~~~di~kAla~GA~~Vm 371 (495)
T PTZ00314 313 SGSICITQEVCAVGRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVM 371 (495)
T ss_pred CCcccccchhccCCCChHHHHHHHHHHHhhcCCeEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 221 01 111 124567778889999999998765543 3567788999776
No 424
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=44.55 E-value=57 Score=32.76 Aligned_cols=100 Identities=24% Similarity=0.293 Sum_probs=56.5
Q ss_pred CcEEEeCChHHHHHHHHHHhccCCCEEEEcCCCccc----hHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEE
Q 009604 216 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRK----TRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 291 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~----t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~ 291 (531)
.-+|.|++|...-.++..+.-.-||+|+.-...-+- ...-.....+..|++-.+++.+-++ ++ +
T Consensus 19 kv~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~~~-------~~-----~ 86 (269)
T COG1606 19 KVVVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNRMD-------PE-----F 86 (269)
T ss_pred eEEEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhhcc-------hh-----h
Confidence 347789999855444444443446766543322221 2222334456678877776643211 11 2
Q ss_pred EeCCCCCCCccc--CHHHHHHHHHhcCCEEEEeCCCCC
Q 009604 292 TESPTNPFLRCV--DVKLVSDLCHKKGAIVCIDGTFAT 327 (531)
Q Consensus 292 lesP~NPtG~v~--dl~~I~~la~~~gi~lIvD~a~a~ 327 (531)
..+|-|+.-.+- =.+.|.+.++++|.-+|+|.|-++
T Consensus 87 ~~n~~~rCY~CK~~v~~~l~~~a~~~Gyd~V~dGtNas 124 (269)
T COG1606 87 KENPENRCYLCKRAVYSTLVEEAEKRGYDVVADGTNAS 124 (269)
T ss_pred ccCCCCcchHHHHHHHHHHHHHHHHcCCCEEEeCCcHH
Confidence 234444433222 156788999999999999999544
No 425
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=44.48 E-value=19 Score=40.70 Aligned_cols=38 Identities=24% Similarity=0.286 Sum_probs=33.5
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCC
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 326 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a 326 (531)
+...| .|++..|..-|++++++.||++||-||+|-+++
T Consensus 200 ~~g~y--Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 200 GTGYY--APTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred cceec--cccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 33444 699999999999999999999999999999965
No 426
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=43.65 E-value=1.8e+02 Score=28.49 Aligned_cols=106 Identities=18% Similarity=0.247 Sum_probs=53.2
Q ss_pred HHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEE-e-CCCCHHHHHHhccCCCcEEEEEeCCCCCC--Cccc---C
Q 009604 233 LALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-I-DPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV---D 304 (531)
Q Consensus 233 ~all~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~-v-d~~d~e~Le~al~~~~tklV~lesP~NPt--G~v~---d 304 (531)
..+.+.| |.|.+.--.-....+.+ ...+..|++.-. + +...++.++..+.. ..+|.+.+.+ |. |.-. .
T Consensus 75 ~~~~~~gad~i~~H~Ea~~~~~~~l-~~ik~~g~k~GlalnP~Tp~~~i~~~l~~--~D~vlvMtV~-PGfgGq~fi~~~ 150 (220)
T PRK08883 75 PDFAKAGASMITFHVEASEHVDRTL-QLIKEHGCQAGVVLNPATPLHHLEYIMDK--VDLILLMSVN-PGFGGQSFIPHT 150 (220)
T ss_pred HHHHHhCCCEEEEcccCcccHHHHH-HHHHHcCCcEEEEeCCCCCHHHHHHHHHh--CCeEEEEEec-CCCCCceecHhH
Confidence 4455555 55554332111222333 234555665432 2 34577888888764 5555554443 42 3221 2
Q ss_pred HHHHHH---HHHhcC--CEEEEeCCCCCCccccccccCCcEEE
Q 009604 305 VKLVSD---LCHKKG--AIVCIDGTFATPLNQKALSLGADLVL 342 (531)
Q Consensus 305 l~~I~~---la~~~g--i~lIvD~a~a~~~~~~~l~~gaDivv 342 (531)
+++|.+ +.+++| +++.+|.--...-.....+.|+|+++
T Consensus 151 lekI~~l~~~~~~~~~~~~I~vdGGI~~eni~~l~~aGAd~vV 193 (220)
T PRK08883 151 LDKLRAVRKMIDESGRDIRLEIDGGVKVDNIREIAEAGADMFV 193 (220)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEECCCCHHHHHHHHHcCCCEEE
Confidence 444444 444443 77888875432212234567899765
No 427
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=42.51 E-value=1.7e+02 Score=29.40 Aligned_cols=60 Identities=13% Similarity=0.173 Sum_probs=25.4
Q ss_pred CEEEEcCCCccchHHHHHhhcccCCcEEE-EeCC-CCHHHHHHhccCCCcEEEEEeCCCCCCCc
Q 009604 240 GHIVTTTDCYRKTRIFIETVLPKMGITAT-VIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLR 301 (531)
Q Consensus 240 D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~-~vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~ 301 (531)
|-|++++..+.-...++ ..++..|+... .+.+ .+.+.++..++.. ...||+-+.+..||.
T Consensus 117 dgviipDlp~ee~~~~~-~~~~~~gl~~i~lv~P~T~~eri~~i~~~~-~gfiy~vs~~G~TG~ 178 (256)
T TIGR00262 117 DGVLVADLPLEESGDLV-EAAKKHGVKPIFLVAPNADDERLKQIAEKS-QGFVYLVSRAGVTGA 178 (256)
T ss_pred CEEEECCCChHHHHHHH-HHHHHCCCcEEEEECCCCCHHHHHHHHHhC-CCCEEEEECCCCCCC
Confidence 45555554332222222 33455565533 2332 2344554444331 225555444445554
No 428
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed
Probab=42.05 E-value=96 Score=34.14 Aligned_cols=110 Identities=20% Similarity=0.183 Sum_probs=62.1
Q ss_pred HHHhccCCCEEEEcCCCccchH---HHHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCcEEEEE-eCCC-CCCCc----
Q 009604 232 LLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFT-ESPT-NPFLR---- 301 (531)
Q Consensus 232 l~all~pGD~VIv~~~~y~~t~---~~~~~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~l-esP~-NPtG~---- 301 (531)
+..++..|-.+++.+..|+... ..++.+-+.+ ++.+..-+..+.++.+.+++-. ...|-+ -.|. +-+++
T Consensus 233 a~~L~~agvdvivvD~a~g~~~~vl~~i~~i~~~~p~~~vi~g~v~t~e~a~~l~~aG-ad~i~vg~g~gs~~~~r~~~~ 311 (486)
T PRK05567 233 AEALVEAGVDVLVVDTAHGHSEGVLDRVREIKAKYPDVQIIAGNVATAEAARALIEAG-ADAVKVGIGPGSICTTRIVAG 311 (486)
T ss_pred HHHHHHhCCCEEEEECCCCcchhHHHHHHHHHhhCCCCCEEEeccCCHHHHHHHHHcC-CCEEEECCCCCccccceeecC
Confidence 3445555644555444444322 2233333333 5565555667888888887654 666644 1232 22222
Q ss_pred --ccCHHHH---HHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEE
Q 009604 302 --CVDVKLV---SDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 342 (531)
Q Consensus 302 --v~dl~~I---~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv 342 (531)
+.++..| ++.++++++++|.|.=...+. ..+.+.+|+|.++
T Consensus 312 ~g~p~~~~~~~~~~~~~~~~~~viadGGi~~~~di~kAla~GA~~v~ 358 (486)
T PRK05567 312 VGVPQITAIADAAEAAKKYGIPVIADGGIRYSGDIAKALAAGASAVM 358 (486)
T ss_pred CCcCHHHHHHHHHHHhccCCCeEEEcCCCCCHHHHHHHHHhCCCEEE
Confidence 2335555 455566799999998765543 3567788999876
No 429
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=39.42 E-value=1.4e+02 Score=30.92 Aligned_cols=97 Identities=18% Similarity=0.201 Sum_probs=56.4
Q ss_pred EEEeCChHH-HHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEE----
Q 009604 218 TVIMASGMS-ASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFT---- 292 (531)
Q Consensus 218 ~i~~sSG~~-Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~l---- 292 (531)
.|++++|.. -=......|++.|-.|++-++...+....+.. .-++....|..|-+.|.+.+.++++.+|+=
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----LQFKFYEGDLLDRALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----ccCceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence 356666652 22234456778887777776666665543322 114555667788888888887765555442
Q ss_pred ----eCCCCCCCc----ccCHHHHHHHHHhcCCE
Q 009604 293 ----ESPTNPFLR----CVDVKLVSDLCHKKGAI 318 (531)
Q Consensus 293 ----esP~NPtG~----v~dl~~I~~la~~~gi~ 318 (531)
|+..+|.-. +.---.|.+.++++|+.
T Consensus 78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~ 111 (329)
T COG1087 78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK 111 (329)
T ss_pred cccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC
Confidence 444444211 11233677788888864
No 430
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=39.41 E-value=94 Score=35.09 Aligned_cols=102 Identities=20% Similarity=0.276 Sum_probs=59.7
Q ss_pred CCCcEEEeCChH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHh---hcccCCcEEEEeCCC-C---HHHHHHhccCC
Q 009604 214 GAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIET---VLPKMGITATVIDPA-D---MEGLEAALNNN 285 (531)
Q Consensus 214 g~e~~i~~sSG~-~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~---~l~~~Gi~v~~vd~~-d---~e~Le~al~~~ 285 (531)
|.+-.+++++|. =.+-.-+.+++.+|=.+|+++ ...+++. .++..|+...+++.. + ...+...+...
T Consensus 32 g~d~lvvmPTGgGKSlCyQiPAll~~G~TLVVSP-----LiSLM~DQV~~l~~~Gi~A~~lnS~l~~~e~~~v~~~l~~g 106 (590)
T COG0514 32 GKDTLVVMPTGGGKSLCYQIPALLLEGLTLVVSP-----LISLMKDQVDQLEAAGIRAAYLNSTLSREERQQVLNQLKSG 106 (590)
T ss_pred CCcEEEEccCCCCcchHhhhHHHhcCCCEEEECc-----hHHHHHHHHHHHHHcCceeehhhcccCHHHHHHHHHHHhcC
Confidence 444444555554 455566778888998888763 3344432 366779888777643 3 34455555554
Q ss_pred CcEEEEEeCCCCCCCcccCHHHHHHHH-HhcCCEEEEeCCCC
Q 009604 286 NVSLFFTESPTNPFLRCVDVKLVSDLC-HKKGAIVCIDGTFA 326 (531)
Q Consensus 286 ~tklV~lesP~NPtG~v~dl~~I~~la-~~~gi~lIvD~a~a 326 (531)
..+++|+ +| -....+ .+.+.. +-.-.++++||++.
T Consensus 107 ~~klLyi-sP---Erl~~~--~f~~~L~~~~i~l~vIDEAHC 142 (590)
T COG0514 107 QLKLLYI-SP---ERLMSP--RFLELLKRLPISLVAIDEAHC 142 (590)
T ss_pred ceeEEEE-Cc---hhhcCh--HHHHHHHhCCCceEEechHHH
Confidence 5899998 22 222211 233322 33356899999953
No 431
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=38.42 E-value=95 Score=25.92 Aligned_cols=61 Identities=15% Similarity=0.081 Sum_probs=39.7
Q ss_pred HHHhhcccCCcEEEEe---CCCCHH--HHHHhccCCCcEEEEEeCCCCCCCccc--CHHHHHHHHHhcCCEEEEe
Q 009604 255 FIETVLPKMGITATVI---DPADME--GLEAALNNNNVSLFFTESPTNPFLRCV--DVKLVSDLCHKKGAIVCID 322 (531)
Q Consensus 255 ~~~~~l~~~Gi~v~~v---d~~d~e--~Le~al~~~~tklV~lesP~NPtG~v~--dl~~I~~la~~~gi~lIvD 322 (531)
-++..++.+|.+..+. +..... .|++.+.+ +.+|++- + +.+- -...+.+.|+++|++++.=
T Consensus 14 ~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~--aD~VIv~--t---~~vsH~~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 14 RYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKK--ADLVIVF--T---DYVSHNAMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred HHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCC--CCEEEEE--e---CCcChHHHHHHHHHHHHcCCcEEEE
Confidence 3456677889998887 222333 48888864 5677662 2 2221 2568888999999988753
No 432
>smart00642 Aamy Alpha-amylase domain.
Probab=38.28 E-value=29 Score=32.32 Aligned_cols=29 Identities=28% Similarity=0.322 Sum_probs=25.6
Q ss_pred CCCcccCHHHHHHHHHhcCCEEEEeCCCC
Q 009604 298 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 326 (531)
Q Consensus 298 PtG~v~dl~~I~~la~~~gi~lIvD~a~a 326 (531)
..|...+++++++.||++|+.||+|-++.
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 46778889999999999999999999853
No 433
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=38.24 E-value=1.5e+02 Score=22.89 Aligned_cols=65 Identities=15% Similarity=0.209 Sum_probs=36.3
Q ss_pred chHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEe
Q 009604 251 KTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 322 (531)
Q Consensus 251 ~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD 322 (531)
+++.+. .+++..|+++..+... .++++. . +..+|++ .|.-..-...++++|.++.++=|-++|+|
T Consensus 6 G~~a~~-~~L~~~g~~v~~~~~~-~~~l~~---~-~~tll~i-~~~~~~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 6 GTYALY-QLLEEQGVKVERWRKP-YEALEA---D-DGTLLVI-GPDLRLSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHH-HHHHHCCCeeEEeccc-HHHhCC---C-CCEEEEE-eCCCCCCchHHHHHHHHHHHcCCEEEEeC
Confidence 344443 5667779998766542 444432 2 2445555 33311111245788888888666666654
No 434
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=37.35 E-value=30 Score=28.88 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=45.1
Q ss_pred HHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe----CCC-CHH---HHHHhccCCCcEEEEEeCCCCCCCccc-
Q 009604 233 LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI----DPA-DME---GLEAALNNNNVSLFFTESPTNPFLRCV- 303 (531)
Q Consensus 233 ~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~v----d~~-d~e---~Le~al~~~~tklV~lesP~NPtG~v~- 303 (531)
..|.+-|=+|+.+ .+|..++ +..|+++..+ ... .++ ++.+.+++++..+|+. +|..-.....
T Consensus 7 ~~l~~lG~~i~AT----~gTa~~L----~~~Gi~~~~v~~~~~~~~~~~g~~~i~~~i~~~~IdlVIn-~~~~~~~~~~~ 77 (95)
T PF02142_consen 7 KRLAELGFEIYAT----EGTAKFL----KEHGIEVTEVVNKIGEGESPDGRVQIMDLIKNGKIDLVIN-TPYPFSDQEHT 77 (95)
T ss_dssp HHHHHTTSEEEEE----HHHHHHH----HHTT--EEECCEEHSTG-GGTHCHHHHHHHHTTSEEEEEE-E--THHHHHTH
T ss_pred HHHHHCCCEEEEC----hHHHHHH----HHcCCCceeeeeecccCccCCchhHHHHHHHcCCeEEEEE-eCCCCcccccC
Confidence 4455567677766 4666444 4568874333 222 122 3777777766776664 4443222333
Q ss_pred CHHHHHHHHHhcCCEEE
Q 009604 304 DVKLVSDLCHKKGAIVC 320 (531)
Q Consensus 304 dl~~I~~la~~~gi~lI 320 (531)
|-..|.+.|-+++++++
T Consensus 78 dg~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 78 DGYKIRRAAVEYNIPLF 94 (95)
T ss_dssp HHHHHHHHHHHTTSHEE
T ss_pred CcHHHHHHHHHcCCCCc
Confidence 67789999999999875
No 435
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=36.29 E-value=93 Score=30.05 Aligned_cols=106 Identities=19% Similarity=0.233 Sum_probs=55.6
Q ss_pred HhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEE--eCCCCHHHHHHhccCCCcEEEEEeCCCCC--CCcccC----
Q 009604 234 ALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCVD---- 304 (531)
Q Consensus 234 all~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~--vd~~d~e~Le~al~~~~tklV~lesP~NP--tG~v~d---- 304 (531)
.+.+.| |.|.+.--........+ ...+..|+++-. -+...++.++..+.. ...|.+.+.. | .|....
T Consensus 75 ~~~~~g~~~i~~H~E~~~~~~~~i-~~ik~~g~k~GialnP~T~~~~~~~~l~~--vD~VlvMsV~-PG~~Gq~f~~~~~ 150 (201)
T PF00834_consen 75 EFAEAGADYITFHAEATEDPKETI-KYIKEAGIKAGIALNPETPVEELEPYLDQ--VDMVLVMSVE-PGFGGQKFIPEVL 150 (201)
T ss_dssp HHHHHT-SEEEEEGGGTTTHHHHH-HHHHHTTSEEEEEE-TTS-GGGGTTTGCC--SSEEEEESS--TTTSSB--HGGHH
T ss_pred HHHhcCCCEEEEcccchhCHHHHH-HHHHHhCCCEEEEEECCCCchHHHHHhhh--cCEEEEEEec-CCCCcccccHHHH
Confidence 344445 55555433222233334 334555665432 244567788877764 6777776663 5 444432
Q ss_pred --HHHHHHHHHh--cCCEEEEeCCCCCCccccccccCCcEEEE
Q 009604 305 --VKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLH 343 (531)
Q Consensus 305 --l~~I~~la~~--~gi~lIvD~a~a~~~~~~~l~~gaDivv~ 343 (531)
++++.++..+ +++.+.+|.--...-.....+.|+|+++.
T Consensus 151 ~KI~~l~~~~~~~~~~~~I~vDGGI~~~~~~~~~~aGad~~V~ 193 (201)
T PF00834_consen 151 EKIRELRKLIPENGLDFEIEVDGGINEENIKQLVEAGADIFVA 193 (201)
T ss_dssp HHHHHHHHHHHHHTCGSEEEEESSESTTTHHHHHHHT--EEEE
T ss_pred HHHHHHHHHHHhcCCceEEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 3445555555 46999999875544344455679997664
No 436
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=36.11 E-value=1.1e+02 Score=30.84 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=33.0
Q ss_pred cCCCcEEEEEeCC----CCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC
Q 009604 283 NNNNVSLFFTESP----TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 328 (531)
Q Consensus 283 ~~~~tklV~lesP----~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~ 328 (531)
...+..+|++|.- .+.|=...|+..|..+-+.-..++|+|-+++++
T Consensus 177 s~GN~~vILCERGIRtfe~~TRntLDi~aV~~~kq~THLPVivDpSH~~G 226 (286)
T COG2876 177 SHGNGNVILCERGIRTFEKATRNTLDISAVPILKQETHLPVIVDPSHATG 226 (286)
T ss_pred hCCCCcEEEEecccccccccccceechHHHHHHHhhcCCCEEECCCCccc
Confidence 3334667777643 234455679999888877788999999998875
No 437
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=36.10 E-value=1.8e+02 Score=30.56 Aligned_cols=93 Identities=18% Similarity=0.224 Sum_probs=49.5
Q ss_pred EEeCChHHHHHHHHHHhccCCC--EEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCC
Q 009604 219 VIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 296 (531)
Q Consensus 219 i~~sSG~~Ai~~al~all~pGD--~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~ 296 (531)
++++.|.-+-.. +..|.+.++ +|++.+-.-.....+... +....++...+|..|.++|++.+++ .++|+-+.|.
T Consensus 2 lvlG~G~vG~~~-~~~L~~~~~~~~v~va~r~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~--~dvVin~~gp 77 (386)
T PF03435_consen 2 LVLGAGRVGSAI-ARLLARRGPFEEVTVADRNPEKAERLAEK-LLGDRVEAVQVDVNDPESLAELLRG--CDVVINCAGP 77 (386)
T ss_dssp EEE--SHHHHHH-HHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTT--SSEEEE-SSG
T ss_pred EEEcCcHHHHHH-HHHHhcCCCCCcEEEEECCHHHHHHHHhh-ccccceeEEEEecCCHHHHHHHHhc--CCEEEECCcc
Confidence 556666633222 233444443 566553332222222111 1334677888899999999999976 4677754433
Q ss_pred CCCCcccCHHHHHHHHHhcCCEEEEe
Q 009604 297 NPFLRCVDVKLVSDLCHKKGAIVCID 322 (531)
Q Consensus 297 NPtG~v~dl~~I~~la~~~gi~lIvD 322 (531)
. .-..|++.|.++|+. .+|
T Consensus 78 ~------~~~~v~~~~i~~g~~-yvD 96 (386)
T PF03435_consen 78 F------FGEPVARACIEAGVH-YVD 96 (386)
T ss_dssp G------GHHHHHHHHHHHT-E-EEE
T ss_pred c------hhHHHHHHHHHhCCC-eec
Confidence 2 345788888888887 456
No 438
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=35.69 E-value=2.9e+02 Score=27.76 Aligned_cols=80 Identities=19% Similarity=0.155 Sum_probs=46.9
Q ss_pred ccCCcEEEEeCC-C-CHHHHHHhcc----CCCcEEEEEeC-CCC--CC-CcccCHHHHHHHHHhcCCEEEEeCCCCCCc-
Q 009604 261 PKMGITATVIDP-A-DMEGLEAALN----NNNVSLFFTES-PTN--PF-LRCVDVKLVSDLCHKKGAIVCIDGTFATPL- 329 (531)
Q Consensus 261 ~~~Gi~v~~vd~-~-d~e~Le~al~----~~~tklV~les-P~N--Pt-G~v~dl~~I~~la~~~gi~lIvD~a~a~~~- 329 (531)
...|.++..-.. . ++++++.++. ..+..+++++. .+. |+ -...|+..|..+.+.++++|+.|..+..+.
T Consensus 129 a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G~r 208 (260)
T TIGR01361 129 GKQGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAGRR 208 (260)
T ss_pred hcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCCcc
Confidence 344555443322 2 4555554442 22345777664 221 32 345789999998888899999999986552
Q ss_pred ------cccccccCCcE
Q 009604 330 ------NQKALSLGADL 340 (531)
Q Consensus 330 ------~~~~l~~gaDi 340 (531)
......+|+|.
T Consensus 209 ~~~~~~~~aAva~Ga~g 225 (260)
T TIGR01361 209 DLVIPLAKAAIAAGADG 225 (260)
T ss_pred chHHHHHHHHHHcCCCE
Confidence 12334568883
No 439
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=35.09 E-value=1.4e+02 Score=30.07 Aligned_cols=92 Identities=18% Similarity=0.325 Sum_probs=50.9
Q ss_pred EEeCChH-HHHHHHHHHhccCCCEEEEc-CCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCC
Q 009604 219 VIMASGM-SASTVMLLALVPAGGHIVTT-TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 296 (531)
Q Consensus 219 i~~sSG~-~Ai~~al~all~pGD~VIv~-~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~ 296 (531)
|++.+|| ++-.++ ..|.+.|..|+++ ...|+. ..+...|......+..|.+++.+.+.++++++|+= -+
T Consensus 3 ILvlGGT~egr~la-~~L~~~g~~v~~s~~t~~~~------~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VID--At 73 (256)
T TIGR00715 3 VLLMGGTVDSRAIA-KGLIAQGIEILVTVTTSEGK------HLYPIHQALTVHTGALDPQELREFLKRHSIDILVD--AT 73 (256)
T ss_pred EEEEechHHHHHHH-HHHHhCCCeEEEEEccCCcc------ccccccCCceEEECCCCHHHHHHHHHhcCCCEEEE--cC
Confidence 4555665 544433 3556677665554 344443 23333443334456677788888887655666652 34
Q ss_pred CCCCcccCHHHHHHHHHhcCCEEE
Q 009604 297 NPFLRCVDVKLVSDLCHKKGAIVC 320 (531)
Q Consensus 297 NPtG~v~dl~~I~~la~~~gi~lI 320 (531)
+|.-..+ -+.+.+.|++.|++.+
T Consensus 74 HPfA~~i-s~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 74 HPFAAQI-TTNATAVCKELGIPYV 96 (256)
T ss_pred CHHHHHH-HHHHHHHHHHhCCcEE
Confidence 4433222 1345677888887765
No 440
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=34.99 E-value=2.5e+02 Score=30.09 Aligned_cols=109 Identities=18% Similarity=0.237 Sum_probs=64.2
Q ss_pred CcEEEeCChHHHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeC
Q 009604 216 ESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTES 294 (531)
Q Consensus 216 e~~i~~sSG~~Ai~~al~all~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~les 294 (531)
..+++.+.|.-+-..+ .-+.+.| ..|.+.+-.-....+.... ....++...+|..|.+++.++|++ ..+|+-.-
T Consensus 2 ~~ilviGaG~Vg~~va-~~la~~~d~~V~iAdRs~~~~~~i~~~--~~~~v~~~~vD~~d~~al~~li~~--~d~VIn~~ 76 (389)
T COG1748 2 MKILVIGAGGVGSVVA-HKLAQNGDGEVTIADRSKEKCARIAEL--IGGKVEALQVDAADVDALVALIKD--FDLVINAA 76 (389)
T ss_pred CcEEEECCchhHHHHH-HHHHhCCCceEEEEeCCHHHHHHHHhh--ccccceeEEecccChHHHHHHHhc--CCEEEEeC
Confidence 3578888887444333 3344445 3455443332222222111 112577888899999999999987 47777766
Q ss_pred CCCCCCccc------------------CHHHHHHHHHhcCCEEEEeCCCCCCc
Q 009604 295 PTNPFLRCV------------------DVKLVSDLCHKKGAIVCIDGTFATPL 329 (531)
Q Consensus 295 P~NPtG~v~------------------dl~~I~~la~~~gi~lIvD~a~a~~~ 329 (531)
|..-+..+. +..++.+.|++.|+..|.+.=+..++
T Consensus 77 p~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi 129 (389)
T COG1748 77 PPFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGI 129 (389)
T ss_pred CchhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcch
Confidence 654432221 12456677778888888777665543
No 441
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=34.76 E-value=2.3e+02 Score=23.09 Aligned_cols=79 Identities=15% Similarity=0.160 Sum_probs=46.8
Q ss_pred HHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEE-EeCC--CCHHHHHHhccCCCcEEEEEeCCCCCCCc--ccCHH
Q 009604 232 LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT-VIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLR--CVDVK 306 (531)
Q Consensus 232 l~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~-~vd~--~d~e~Le~al~~~~tklV~lesP~NPtG~--v~dl~ 306 (531)
+..+.+-|=+|+.+. +|..++ +..|+++. .+.. .+...+.+.++..+..+|+. +|. +.+. .-|-.
T Consensus 6 ~~~l~~lG~~i~AT~----gTa~~L----~~~Gi~~~~~~~ki~~~~~~i~~~i~~g~id~VIn-~~~-~~~~~~~~d~~ 75 (90)
T smart00851 6 AKRLAELGFELVATG----GTAKFL----REAGLPVKTLHPKVHGGILAILDLIKNGEIDLVIN-TLY-PLGAQPHEDGK 75 (90)
T ss_pred HHHHHHCCCEEEEcc----HHHHHH----HHCCCcceeccCCCCCCCHHHHHHhcCCCeEEEEE-CCC-cCcceeccCcH
Confidence 344555577777663 455444 44677764 2321 23345667777766777764 443 2222 33567
Q ss_pred HHHHHHHhcCCEEE
Q 009604 307 LVSDLCHKKGAIVC 320 (531)
Q Consensus 307 ~I~~la~~~gi~lI 320 (531)
.|.+.|-++|++++
T Consensus 76 ~iRr~A~~~~Ip~~ 89 (90)
T smart00851 76 ALRRAAENIDIPGA 89 (90)
T ss_pred HHHHHHHHcCCCee
Confidence 89999999998875
No 442
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=34.69 E-value=1.3e+02 Score=27.10 Aligned_cols=61 Identities=11% Similarity=0.172 Sum_probs=41.3
Q ss_pred HHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhc
Q 009604 253 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 315 (531)
Q Consensus 253 ~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~ 315 (531)
..++..+++..|.++.++-.+ .++++.+++.+.++.+|.+..... .....++++.+.+++.
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhc
Confidence 344555678889999887654 568887777665688998854442 3344567777777765
No 443
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.
Probab=34.41 E-value=1.6e+02 Score=31.57 Aligned_cols=80 Identities=20% Similarity=0.161 Sum_probs=51.9
Q ss_pred hcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCccc-----CHHHHHHHHHhc--CCEEEEeCCCCCCcc-
Q 009604 259 VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKK--GAIVCIDGTFATPLN- 330 (531)
Q Consensus 259 ~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~-----dl~~I~~la~~~--gi~lIvD~a~a~~~~- 330 (531)
+....++++..-...+.++.+.+++.. .+.|++. |.-|... .++.|.++.+.. ++.|++|.-...+..
T Consensus 248 lr~~~~~pvivKgV~~~~dA~~a~~~G-~d~I~vs---nhGGr~~d~~~~t~~~L~ei~~~~~~~~~vi~dGGIr~G~Dv 323 (383)
T cd03332 248 LREWTDLPIVLKGILHPDDARRAVEAG-VDGVVVS---NHGGRQVDGSIAALDALPEIVEAVGDRLTVLFDSGVRTGADI 323 (383)
T ss_pred HHHhcCCCEEEecCCCHHHHHHHHHCC-CCEEEEc---CCCCcCCCCCcCHHHHHHHHHHHhcCCCeEEEeCCcCcHHHH
Confidence 333445555544456888888888774 8899884 4445443 466677766544 499999987655433
Q ss_pred ccccccCCcEEE
Q 009604 331 QKALSLGADLVL 342 (531)
Q Consensus 331 ~~~l~~gaDivv 342 (531)
.+.+.+|+|.+.
T Consensus 324 ~KALaLGA~~v~ 335 (383)
T cd03332 324 MKALALGAKAVL 335 (383)
T ss_pred HHHHHcCCCEEE
Confidence 456677887665
No 444
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=34.38 E-value=2.6e+02 Score=26.20 Aligned_cols=106 Identities=16% Similarity=0.101 Sum_probs=57.5
Q ss_pred HhccCC-CEEEEcCCCccc-hHHHHHhhcccCCcEEEE--eCCCCHHHHHHhccCCCcEEEEEeCCCCCCC---cccCHH
Q 009604 234 ALVPAG-GHIVTTTDCYRK-TRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPFL---RCVDVK 306 (531)
Q Consensus 234 all~pG-D~VIv~~~~y~~-t~~~~~~~l~~~Gi~v~~--vd~~d~e~Le~al~~~~tklV~lesP~NPtG---~v~dl~ 306 (531)
.+.+.| |.|+++...... ...++ ..++..|+++.. ....+++++.+++... ...|.+ .|....+ .....+
T Consensus 72 ~~~~aGad~i~~h~~~~~~~~~~~i-~~~~~~g~~~~v~~~~~~t~~e~~~~~~~~-~d~v~~-~~~~~~~~~~~~~~~~ 148 (202)
T cd04726 72 MAFKAGADIVTVLGAAPLSTIKKAV-KAAKKYGKEVQVDLIGVEDPEKRAKLLKLG-VDIVIL-HRGIDAQAAGGWWPED 148 (202)
T ss_pred HHHhcCCCEEEEEeeCCHHHHHHHH-HHHHHcCCeEEEEEeCCCCHHHHHHHHHCC-CCEEEE-cCcccccccCCCCCHH
Confidence 333444 666665433221 12233 345566877654 4666777776666543 555555 3332222 234577
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEE
Q 009604 307 LVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVL 342 (531)
Q Consensus 307 ~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv 342 (531)
.+.++.+..++++++|.=....-.....+.|+|.++
T Consensus 149 ~i~~~~~~~~~~i~~~GGI~~~~i~~~~~~Gad~vv 184 (202)
T cd04726 149 DLKKVKKLLGVKVAVAGGITPDTLPEFKKAGADIVI 184 (202)
T ss_pred HHHHHHhhcCCCEEEECCcCHHHHHHHHhcCCCEEE
Confidence 887777667888988864431112234556888655
No 445
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=33.86 E-value=2e+02 Score=30.98 Aligned_cols=111 Identities=15% Similarity=0.141 Sum_probs=62.7
Q ss_pred HHHHhccCCCEEEEcCCCccchH---HHHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCcEEEEEe-CCCC------CC
Q 009604 231 MLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PF 299 (531)
Q Consensus 231 al~all~pGD~VIv~~~~y~~t~---~~~~~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~le-sP~N------Pt 299 (531)
-+..+++.|-.||+-+..++... .+++.+=+.+ ++.+..-+..+.++.+.+++-. ..+|.+- .|.. .+
T Consensus 157 ~v~~lv~aGvDvI~iD~a~g~~~~~~~~v~~ik~~~p~~~vi~g~V~T~e~a~~l~~aG-aD~I~vG~g~Gs~c~tr~~~ 235 (404)
T PRK06843 157 RVEELVKAHVDILVIDSAHGHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVG-ADCLKVGIGPGSICTTRIVA 235 (404)
T ss_pred HHHHHHhcCCCEEEEECCCCCChhHHHHHHHHHhhCCCCcEEEEecCCHHHHHHHHHcC-CCEEEECCCCCcCCcceeec
Confidence 34556677755555444444222 2332222222 3444444666788888877654 6666542 2211 12
Q ss_pred Cc-ccCH---HHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEE
Q 009604 300 LR-CVDV---KLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 342 (531)
Q Consensus 300 G~-v~dl---~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv 342 (531)
|. ..++ ..+.+++++.+++||.|.=...+ -..+.+.+|+|.|+
T Consensus 236 g~g~p~ltai~~v~~~~~~~~vpVIAdGGI~~~~Di~KALalGA~aVm 283 (404)
T PRK06843 236 GVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 (404)
T ss_pred CCCCChHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 22 1234 45577777889999999875544 33567888999776
No 446
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=33.67 E-value=2.3e+02 Score=28.62 Aligned_cols=43 Identities=16% Similarity=0.102 Sum_probs=30.1
Q ss_pred CcEEEEEeC----CCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCC
Q 009604 286 NVSLFFTES----PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 328 (531)
Q Consensus 286 ~tklV~les----P~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~ 328 (531)
+..+++++. .+|..-...|+..|..+-+..+.+|++|..++.+
T Consensus 162 n~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 162 NENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 346666653 3344445567888887777779999999998765
No 447
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=33.64 E-value=1.7e+02 Score=32.19 Aligned_cols=112 Identities=18% Similarity=0.136 Sum_probs=64.8
Q ss_pred HHHHHhccCCCEEEEcCCCccchHHHH---HhhcccC-CcEEEEeCCCCHHHHHHhccCCCcEEEE-------EeCCCCC
Q 009604 230 VMLLALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFF-------TESPTNP 298 (531)
Q Consensus 230 ~al~all~pGD~VIv~~~~y~~t~~~~---~~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~-------lesP~NP 298 (531)
..+..+++.|-.+|+-+..|+.....+ +.+-+.+ ++.+.--+..+.+..+++++.. ..+|- +|+-...
T Consensus 230 ~~a~~Lv~aGvd~i~~D~a~~~~~~~~~~i~~ik~~~p~~~v~agnv~t~~~a~~l~~aG-ad~v~vgig~gsictt~~~ 308 (479)
T PRK07807 230 AKARALLEAGVDVLVVDTAHGHQEKMLEALRAVRALDPGVPIVAGNVVTAEGTRDLVEAG-ADIVKVGVGPGAMCTTRMM 308 (479)
T ss_pred HHHHHHHHhCCCEEEEeccCCccHHHHHHHHHHHHHCCCCeEEeeccCCHHHHHHHHHcC-CCEEEECccCCcccccccc
Confidence 444566677766666666666443333 2222222 3444433666788888877653 44443 1222334
Q ss_pred CCcc-cCHHHHHHHHH---hcCCEEEEeCCCCCC-ccccccccCCcEEE
Q 009604 299 FLRC-VDVKLVSDLCH---KKGAIVCIDGTFATP-LNQKALSLGADLVL 342 (531)
Q Consensus 299 tG~v-~dl~~I~~la~---~~gi~lIvD~a~a~~-~~~~~l~~gaDivv 342 (531)
+|.- .++..|.++++ ++++++|.|.-...+ -..+.+..|+|.++
T Consensus 309 ~~~~~p~~~av~~~~~~~~~~~~~via~ggi~~~~~~~~al~~ga~~v~ 357 (479)
T PRK07807 309 TGVGRPQFSAVLECAAAARELGAHVWADGGVRHPRDVALALAAGASNVM 357 (479)
T ss_pred cCCchhHHHHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHHHcCCCeee
Confidence 4433 35666665554 789999999875543 33566778998766
No 448
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models.
Probab=33.62 E-value=1.4e+02 Score=32.50 Aligned_cols=108 Identities=21% Similarity=0.191 Sum_probs=63.0
Q ss_pred HhccCCCEEEEcCCCccchHHHH---HhhcccC-CcEEEEeCCCCHHHHHHhccCCCcEEEEEe-CCCC--CC----Ccc
Q 009604 234 ALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN--PF----LRC 302 (531)
Q Consensus 234 all~pGD~VIv~~~~y~~t~~~~---~~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~le-sP~N--Pt----G~v 302 (531)
.+++.|-.+|.-+..|+.....+ +.+-+.+ .+.+..-+..+.++.+.+++.. ...|-+. .|.. .| |.-
T Consensus 231 ~L~~aG~d~I~vd~a~g~~~~~~~~i~~i~~~~~~~~vi~G~v~t~~~a~~l~~aG-ad~i~vg~g~G~~~~t~~~~~~g 309 (450)
T TIGR01302 231 ALVKAGVDVIVIDSSHGHSIYVIDSIKEIKKTYPDLDIIAGNVATAEQAKALIDAG-ADGLRVGIGPGSICTTRIVAGVG 309 (450)
T ss_pred HHHHhCCCEEEEECCCCcHhHHHHHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHhC-CCEEEECCCCCcCCccceecCCC
Confidence 55666655555555555433333 2222222 3444433566888888888764 6777553 2321 11 111
Q ss_pred ----cCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEE
Q 009604 303 ----VDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 342 (531)
Q Consensus 303 ----~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv 342 (531)
..+.++.+.++++++++|.|.=...+. ..+.+.+|+|.++
T Consensus 310 ~p~~~~i~~~~~~~~~~~vpviadGGi~~~~di~kAla~GA~~V~ 354 (450)
T TIGR01302 310 VPQITAVYDVAEYAAQSGIPVIADGGIRYSGDIVKALAAGADAVM 354 (450)
T ss_pred ccHHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 124566777888999999998755543 3577888999776
No 449
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=33.28 E-value=2.5e+02 Score=23.81 Aligned_cols=83 Identities=14% Similarity=0.139 Sum_probs=50.5
Q ss_pred HHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhc--CCEEEEeCCCCCCccc
Q 009604 255 FIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ 331 (531)
Q Consensus 255 ~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~--gi~lIvD~a~a~~~~~ 331 (531)
.+...++..|.++.+.... ..+++.+.+...++++|.+..-. +.....++.+.++.+++ ++++++=..+.+....
T Consensus 18 ~~~~~l~~~G~~v~~l~~~~~~~~~~~~i~~~~pdiV~iS~~~--~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t~~~~ 95 (125)
T cd02065 18 IVAIALRDNGFEVIDLGVDVPPEEIVEAAKEEDADVVGLSALS--TTHMEAMKLVIEALKELGIDIPVVVGGAHPTADPE 95 (125)
T ss_pred HHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEEecch--HhHHHHHHHHHHHHHhcCCCCeEEEeCCcCCcccc
Confidence 3445577889998887644 45666666655458888884433 12224566666776766 5888886665554333
Q ss_pred cccccCCcEEE
Q 009604 332 KALSLGADLVL 342 (531)
Q Consensus 332 ~~l~~gaDivv 342 (531)
. ...|+++
T Consensus 96 ~---~~~d~~~ 103 (125)
T cd02065 96 E---PKVDAVV 103 (125)
T ss_pred c---cccceee
Confidence 2 2356655
No 450
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional
Probab=33.26 E-value=3.7e+02 Score=28.83 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=41.6
Q ss_pred hhcccCCcEEEE--eCCCCH-HHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHH-hcCCEEEEeCCCCCCccccc
Q 009604 258 TVLPKMGITATV--IDPADM-EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH-KKGAIVCIDGTFATPLNQKA 333 (531)
Q Consensus 258 ~~l~~~Gi~v~~--vd~~d~-e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~-~~gi~lIvD~a~a~~~~~~~ 333 (531)
..++..|+.+.. +.+.++ +.++.. .. ....|.+.+-.+|.+.-...+.|.++.+ ..++++.+|.--...-....
T Consensus 270 ~~akk~GikvgVD~lnp~tp~e~i~~l-~~-~vD~Vllht~vdp~~~~~~~~kI~~ikk~~~~~~I~VdGGI~~eti~~l 347 (391)
T PRK13307 270 HEAQKTGIYSILDMLNVEDPVKLLESL-KV-KPDVVELHRGIDEEGTEHAWGNIKEIKKAGGKILVAVAGGVRVENVEEA 347 (391)
T ss_pred HHHHHcCCEEEEEEcCCCCHHHHHHHh-hC-CCCEEEEccccCCCcccchHHHHHHHHHhCCCCcEEEECCcCHHHHHHH
Confidence 345666776542 223333 344443 33 2566766544455444333455554443 24677888864332212234
Q ss_pred cccCCcEEE
Q 009604 334 LSLGADLVL 342 (531)
Q Consensus 334 l~~gaDivv 342 (531)
...|+|+++
T Consensus 348 ~~aGADivV 356 (391)
T PRK13307 348 LKAGADILV 356 (391)
T ss_pred HHcCCCEEE
Confidence 456888665
No 451
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=32.49 E-value=3.1e+02 Score=28.81 Aligned_cols=80 Identities=21% Similarity=0.164 Sum_probs=48.2
Q ss_pred cccCCcEEEEeCC--CCHHHHHHhc----cCCCcEEEEEeC-C-C--CCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCc
Q 009604 260 LPKMGITATVIDP--ADMEGLEAAL----NNNNVSLFFTES-P-T--NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 329 (531)
Q Consensus 260 l~~~Gi~v~~vd~--~d~e~Le~al----~~~~tklV~les-P-~--NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~ 329 (531)
+...|.++..-.. .+++++..+. ...+..+++++. . + +.+-...|+..|..+-+..+.+||+|..++.+.
T Consensus 196 va~~~kPViLk~G~~~ti~E~l~A~e~i~~~GN~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~ 275 (335)
T PRK08673 196 VGKTNKPVLLKRGMSATIEEWLMAAEYILAEGNPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGK 275 (335)
T ss_pred HHcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCcc
Confidence 3344555543332 2455554443 233356777763 2 1 334556788898888777899999999987664
Q ss_pred c-------ccccccCCc
Q 009604 330 N-------QKALSLGAD 339 (531)
Q Consensus 330 ~-------~~~l~~gaD 339 (531)
. ......|+|
T Consensus 276 ~~~v~~~a~AAvA~GAd 292 (335)
T PRK08673 276 RDLVEPLALAAVAAGAD 292 (335)
T ss_pred ccchHHHHHHHHHhCCC
Confidence 1 223456887
No 452
>PRK04296 thymidine kinase; Provisional
Probab=32.42 E-value=1.5e+02 Score=28.05 Aligned_cols=94 Identities=9% Similarity=0.077 Sum_probs=45.7
Q ss_pred HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhcc--CCCcEEEEEeCCCCCCCccc
Q 009604 226 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN--NNNVSLFFTESPTNPFLRCV 303 (531)
Q Consensus 226 ~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~--~~~tklV~lesP~NPtG~v~ 303 (531)
.++..+. .+...|..|++..+.+...+ .....+.+.|+++........+++.+.+. +++..+|++.-.... ..-
T Consensus 18 ~~l~~~~-~~~~~g~~v~i~k~~~d~~~-~~~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~dvviIDEaq~l--~~~ 93 (190)
T PRK04296 18 ELLQRAY-NYEERGMKVLVFKPAIDDRY-GEGKVVSRIGLSREAIPVSSDTDIFELIEEEGEKIDCVLIDEAQFL--DKE 93 (190)
T ss_pred HHHHHHH-HHHHcCCeEEEEeccccccc-cCCcEecCCCCcccceEeCChHHHHHHHHhhCCCCCEEEEEccccC--CHH
Confidence 4444443 34456888776654322211 12234555666543322233344433332 223678888766421 011
Q ss_pred CHHHHHHHHHhcCCEEEEeC
Q 009604 304 DVKLVSDLCHKKGAIVCIDG 323 (531)
Q Consensus 304 dl~~I~~la~~~gi~lIvD~ 323 (531)
.+.++.+.++..|+.+|+=.
T Consensus 94 ~v~~l~~~l~~~g~~vi~tg 113 (190)
T PRK04296 94 QVVQLAEVLDDLGIPVICYG 113 (190)
T ss_pred HHHHHHHHHHHcCCeEEEEe
Confidence 14456666667887777643
No 453
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=32.41 E-value=3.6e+02 Score=27.24 Aligned_cols=78 Identities=18% Similarity=0.128 Sum_probs=46.6
Q ss_pred hhcccCCcEEEEeCCCCHH-HHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccccccc
Q 009604 258 TVLPKMGITATVIDPADME-GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSL 336 (531)
Q Consensus 258 ~~l~~~Gi~v~~vd~~d~e-~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~ 336 (531)
..+.+.|..+..++..... .....++++ --+|.+ +..|...++-++++.++++|+.+|. -+.....|+..
T Consensus 150 ~~l~~ig~~~~~~~d~~~~~~~~~~~~~~-Dv~i~i----S~sG~t~e~i~~a~~ak~~ga~vIa----iT~~~~spla~ 220 (281)
T COG1737 150 YKLMRIGLNVVALSDTHGQLMQLALLTPG-DVVIAI----SFSGYTREIVEAAELAKERGAKVIA----ITDSADSPLAK 220 (281)
T ss_pred HHHHHcCCceeEecchHHHHHHHHhCCCC-CEEEEE----eCCCCcHHHHHHHHHHHHCCCcEEE----EcCCCCCchhh
Confidence 3456667777666533222 233345554 334443 4568888999999999999988764 12222344544
Q ss_pred CCcEEEEC
Q 009604 337 GADLVLHS 344 (531)
Q Consensus 337 gaDivv~S 344 (531)
-+|+++..
T Consensus 221 ~Ad~~L~~ 228 (281)
T COG1737 221 LADIVLLV 228 (281)
T ss_pred hhceEEec
Confidence 57777644
No 454
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=32.37 E-value=3.5e+02 Score=26.22 Aligned_cols=101 Identities=15% Similarity=0.083 Sum_probs=55.9
Q ss_pred HHHHHHhccCCCE-EEEcCCCccchHHHHHhhcccCC-cEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccCHH
Q 009604 229 TVMLLALVPAGGH-IVTTTDCYRKTRIFIETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK 306 (531)
Q Consensus 229 ~~al~all~pGD~-VIv~~~~y~~t~~~~~~~l~~~G-i~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~ 306 (531)
.-+..++.+.|=+ |-++-.. ......++.+.+.++ +.+---...+.++++++++.. .+.|+ +|+- -+
T Consensus 23 ~~~~~al~~~Gi~~iEit~~t-~~a~~~i~~l~~~~~~~~vGAGTVl~~~~a~~a~~aG-A~Fiv--sP~~-------~~ 91 (204)
T TIGR01182 23 LPLAKALIEGGLRVLEVTLRT-PVALDAIRLLRKEVPDALIGAGTVLNPEQLRQAVDAG-AQFIV--SPGL-------TP 91 (204)
T ss_pred HHHHHHHHHcCCCEEEEeCCC-ccHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHcC-CCEEE--CCCC-------CH
Confidence 3445666666643 3333222 333444444333332 333222356899999998764 55554 5652 34
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCccccccccCCcEE
Q 009604 307 LVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLV 341 (531)
Q Consensus 307 ~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDiv 341 (531)
++.+.|+++|++++-- ++...-.....++|+|++
T Consensus 92 ~v~~~~~~~~i~~iPG-~~TptEi~~A~~~Ga~~v 125 (204)
T TIGR01182 92 ELAKHAQDHGIPIIPG-VATPSEIMLALELGITAL 125 (204)
T ss_pred HHHHHHHHcCCcEECC-CCCHHHHHHHHHCCCCEE
Confidence 8899999999988762 221111234567788865
No 455
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=32.34 E-value=1.2e+02 Score=29.36 Aligned_cols=108 Identities=16% Similarity=0.142 Sum_probs=58.1
Q ss_pred CCCcEEEeCChH--HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEeCCCCHHHHHHhccCC---C
Q 009604 214 GAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADMEGLEAALNNN---N 286 (531)
Q Consensus 214 g~e~~i~~sSG~--~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi--~v~~vd~~d~e~Le~al~~~---~ 286 (531)
++..++=+++++ +++.++- .+.++.+|++-...- ......+..+++.|. .+.++..+-.+.|.+...+. +
T Consensus 45 ~~k~vLEIGt~~GySal~la~--~l~~~g~i~tiE~~~-~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~~~~~ 121 (205)
T PF01596_consen 45 RPKRVLEIGTFTGYSALWLAE--ALPEDGKITTIEIDP-ERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDGEEGQ 121 (205)
T ss_dssp T-SEEEEESTTTSHHHHHHHH--TSTTTSEEEEEESSH-HHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTTTTTS
T ss_pred CCceEEEeccccccHHHHHHH--hhcccceEEEecCcH-HHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhccCCCc
Confidence 455666666554 6665552 345556776654432 223344445555554 34444444345555554432 3
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCC
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 327 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~ 327 (531)
-.+||+...- ......++.+.++.+ .|..+|+||+...
T Consensus 122 fD~VFiDa~K--~~y~~y~~~~~~ll~-~ggvii~DN~l~~ 159 (205)
T PF01596_consen 122 FDFVFIDADK--RNYLEYFEKALPLLR-PGGVIIADNVLWR 159 (205)
T ss_dssp EEEEEEESTG--GGHHHHHHHHHHHEE-EEEEEEEETTTGG
T ss_pred eeEEEEcccc--cchhhHHHHHhhhcc-CCeEEEEcccccc
Confidence 7999997642 223333555555554 4778999999643
No 456
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=31.89 E-value=56 Score=34.47 Aligned_cols=119 Identities=19% Similarity=0.229 Sum_probs=64.7
Q ss_pred HHhccCCCEEEEcCCCccchHHHH---HhhcccCC-cEEEEeCCCCHHHHHHhccCCCcEEEEEe-CCCCC------CCc
Q 009604 233 LALVPAGGHIVTTTDCYRKTRIFI---ETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTE-SPTNP------FLR 301 (531)
Q Consensus 233 ~all~pGD~VIv~~~~y~~t~~~~---~~~l~~~G-i~v~~vd~~d~e~Le~al~~~~tklV~le-sP~NP------tG~ 301 (531)
..|++.|-.+|+-+..|+.....+ +.+-+.++ +.+.-=+..+.+..+.+++.. ...|-+- .|... +|.
T Consensus 114 ~~L~~agvD~ivID~a~g~s~~~~~~ik~ik~~~~~~~viaGNV~T~e~a~~L~~aG-ad~vkVGiGpGsiCtTr~v~Gv 192 (352)
T PF00478_consen 114 EALVEAGVDVIVIDSAHGHSEHVIDMIKKIKKKFPDVPVIAGNVVTYEGAKDLIDAG-ADAVKVGIGPGSICTTREVTGV 192 (352)
T ss_dssp HHHHHTT-SEEEEE-SSTTSHHHHHHHHHHHHHSTTSEEEEEEE-SHHHHHHHHHTT--SEEEESSSSSTTBHHHHHHSB
T ss_pred HHHHHcCCCEEEccccCccHHHHHHHHHHHHHhCCCceEEecccCCHHHHHHHHHcC-CCEEEEeccCCccccccccccc
Confidence 345556644444444554433332 22223344 555444455788888888764 6666651 22221 222
Q ss_pred ccC----HHHHHHHHHhcCCEEEEeCCCC-CCccccccccCCcEEEECCccccccCCC
Q 009604 302 CVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFIGGHND 354 (531)
Q Consensus 302 v~d----l~~I~~la~~~gi~lIvD~a~a-~~~~~~~l~~gaDivv~S~sK~lgg~g~ 354 (531)
-.| +.+.++.++++++++|-|.=.. .+-..+.+..|+|.|+ +-.+|+|.-.
T Consensus 193 G~PQ~tAv~~~a~~a~~~~v~iIADGGi~~sGDi~KAla~GAd~VM--lG~llAgt~E 248 (352)
T PF00478_consen 193 GVPQLTAVYECAEAARDYGVPIIADGGIRTSGDIVKALAAGADAVM--LGSLLAGTDE 248 (352)
T ss_dssp SCTHHHHHHHHHHHHHCTTSEEEEESS-SSHHHHHHHHHTT-SEEE--ESTTTTTBTT
T ss_pred CCcHHHHHHHHHHHhhhccCceeecCCcCcccceeeeeeeccccee--echhhccCcC
Confidence 223 4566777888999999998533 3344677889999887 3445665543
No 457
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=31.89 E-value=4.8e+02 Score=25.94 Aligned_cols=73 Identities=29% Similarity=0.239 Sum_probs=40.3
Q ss_pred cccCCcEEEEeCCCCHHHHH---HhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCcccccccc
Q 009604 260 LPKMGITATVIDPADMEGLE---AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSL 336 (531)
Q Consensus 260 l~~~Gi~v~~vd~~d~e~Le---~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~ 336 (531)
+.+.|..+... .|...+. ..++++ --+|++ +..|...++.++++.|+++|+.+|. -+.....++..
T Consensus 150 l~~~g~~~~~~--~d~~~~~~~~~~~~~~-Dv~I~i----S~sg~~~~~~~~~~~ak~~ga~iI~----IT~~~~s~la~ 218 (278)
T PRK11557 150 LMKIGINAVAE--RDMHALLATVQALSPD-DLLLAI----SYSGERRELNLAADEALRVGAKVLA----ITGFTPNALQQ 218 (278)
T ss_pred HhhCCCeEEEc--CChHHHHHHHHhCCCC-CEEEEE----cCCCCCHHHHHHHHHHHHcCCCEEE----EcCCCCCchHH
Confidence 45566665443 3333222 234443 334444 4467878888999999999876553 11122233444
Q ss_pred CCcEEEE
Q 009604 337 GADLVLH 343 (531)
Q Consensus 337 gaDivv~ 343 (531)
.+|+++.
T Consensus 219 ~ad~~l~ 225 (278)
T PRK11557 219 RASHCLY 225 (278)
T ss_pred hCCEEEE
Confidence 4777664
No 458
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=31.82 E-value=31 Score=34.34 Aligned_cols=31 Identities=29% Similarity=0.263 Sum_probs=26.9
Q ss_pred CCCCCCcccCHHHHHHHHHhcCCEEEEeCCC
Q 009604 295 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 325 (531)
Q Consensus 295 P~NPtG~v~dl~~I~~la~~~gi~lIvD~a~ 325 (531)
+..-.|...+++++++.||++|+.||+|-+.
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cccccchhhhhhhhhhccccccceEEEeeec
Confidence 3445788889999999999999999999984
No 459
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=31.44 E-value=2.2e+02 Score=28.71 Aligned_cols=80 Identities=10% Similarity=0.086 Sum_probs=34.2
Q ss_pred CEEEEcCCCccchHHHHHhhcccCCcEEEE-eCC-CCHHHHHHhccCCCcEEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009604 240 GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 313 (531)
Q Consensus 240 D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~-vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~v~d----l~~I~~la~ 313 (531)
|-||+++.-+.-... +...+...|+...+ +.+ ...+.+++..+.. ...||+-+-...||.-.+ +++..+..+
T Consensus 117 dGlIipDLP~ee~~~-~~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~a-~gFiY~vs~~GvTG~~~~~~~~l~~~i~~ik 194 (259)
T PF00290_consen 117 DGLIIPDLPPEESEE-LREAAKKHGLDLIPLVAPTTPEERIKKIAKQA-SGFIYLVSRMGVTGSRTELPDELKEFIKRIK 194 (259)
T ss_dssp EEEEETTSBGGGHHH-HHHHHHHTT-EEEEEEETTS-HHHHHHHHHH--SSEEEEESSSSSSSTTSSCHHHHHHHHHHHH
T ss_pred CEEEEcCCChHHHHH-HHHHHHHcCCeEEEEECCCCCHHHHHHHHHhC-CcEEEeeccCCCCCCcccchHHHHHHHHHHH
Confidence 455665544433222 22344555555433 223 3344444443322 456666555555665432 334444444
Q ss_pred hc-CCEEEE
Q 009604 314 KK-GAIVCI 321 (531)
Q Consensus 314 ~~-gi~lIv 321 (531)
++ +.++++
T Consensus 195 ~~~~~Pv~v 203 (259)
T PF00290_consen 195 KHTDLPVAV 203 (259)
T ss_dssp HTTSS-EEE
T ss_pred hhcCcceEE
Confidence 43 355544
No 460
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial. A deep split separates two families of GMP reductase. The other (TIGR01305) is found in eukaryotic and some proteobacterial lineages, including E. coli, while this family is found in a variety of bacterial lineages.
Probab=31.15 E-value=5.5e+02 Score=26.73 Aligned_cols=123 Identities=11% Similarity=0.080 Sum_probs=68.1
Q ss_pred EEeCChH-HHHHHHHHHhccCC---CEEEEcCCCccchHHHH---HhhcccCCcEEEEe-CCCCHHHHHHhccCCCcEEE
Q 009604 219 VIMASGM-SASTVMLLALVPAG---GHIVTTTDCYRKTRIFI---ETVLPKMGITATVI-DPADMEGLEAALNNNNVSLF 290 (531)
Q Consensus 219 i~~sSG~-~Ai~~al~all~pG---D~VIv~~~~y~~t~~~~---~~~l~~~Gi~v~~v-d~~d~e~Le~al~~~~tklV 290 (531)
+..+.|. ..=.--+..++++| |.|+ -+..|+-....+ +.+-+.+....... +..+.+..+.+++.. .+.|
T Consensus 85 v~~SvG~t~e~~~r~~~lv~a~~~~d~i~-~D~ahg~s~~~~~~i~~i~~~~p~~~vi~GnV~t~e~a~~l~~aG-ad~I 162 (321)
T TIGR01306 85 ASISVGVKACEYEFVTQLAEEALTPEYIT-IDIAHGHSNSVINMIKHIKTHLPDSFVIAGNVGTPEAVRELENAG-ADAT 162 (321)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCCCCEEE-EeCccCchHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHcC-cCEE
Confidence 4455555 22223344567777 5544 455665544333 22223333332222 245677777777654 6777
Q ss_pred EEe-CCCCC------C--Ccc-cCHHHHHHHHHhcCCEEEEeCCCCCCc-cccccccCCcEEEE
Q 009604 291 FTE-SPTNP------F--LRC-VDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLH 343 (531)
Q Consensus 291 ~le-sP~NP------t--G~v-~dl~~I~~la~~~gi~lIvD~a~a~~~-~~~~l~~gaDivv~ 343 (531)
.+. .|... + |.. ..+..|.++++..+++||.|.-...+. ..+.+.+|+|.|+.
T Consensus 163 ~V~~G~G~~~~tr~~~g~g~~~~~l~ai~ev~~a~~~pVIadGGIr~~~Di~KALa~GAd~Vmi 226 (321)
T TIGR01306 163 KVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGASMVMI 226 (321)
T ss_pred EECCCCCccccceeeeccCCCchHHHHHHHHHHhcCCeEEEECCcCcHHHHHHHHHcCCCEEee
Confidence 653 22211 1 111 136788888888899999998754432 34667889998774
No 461
>PRK06222 ferredoxin-NADP(+) reductase subunit alpha; Reviewed
Probab=30.91 E-value=3e+02 Score=27.69 Aligned_cols=107 Identities=20% Similarity=0.273 Sum_probs=52.1
Q ss_pred CCCCCCCCC-CCCcEEEeCChH--HHHHHHHHHhccCCCEEEEcCCCccc---hHHHHHhhcccCCcEEEE-eCCC----
Q 009604 205 GRYGNPTTV-GAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRK---TRIFIETVLPKMGITATV-IDPA---- 273 (531)
Q Consensus 205 ~R~gnPt~~-g~e~~i~~sSG~--~Ai~~al~all~pGD~VIv~~~~y~~---t~~~~~~~l~~~Gi~v~~-vd~~---- 273 (531)
+-+|++... .....+++++|+ +.+..++..+.+.+..|.+ .|+. ...++...+..+..++.. .+..
T Consensus 87 GP~G~~~~~~~~~~~llIaGGiGiaPl~~l~~~l~~~~~~v~l---~~g~r~~~d~~~~~el~~~~~~~~v~~~d~~~g~ 163 (281)
T PRK06222 87 GPLGKPSEIEKFGTVVCVGGGVGIAPVYPIAKALKEAGNKVIT---IIGARNKDLLILEDEMKAVSDELYVTTDDGSYGR 163 (281)
T ss_pred cCCCCCcccCCCCeEEEEeCcCcHHHHHHHHHHHHHCCCeEEE---EEecCCHHHhhcHHHHHhhCCeEEEEcCCCCcCc
Confidence 334554322 234677887776 6677777777665544432 1111 111122222233222211 1110
Q ss_pred --C-HHHHHHhccCCC-cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEE
Q 009604 274 --D-MEGLEAALNNNN-VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 320 (531)
Q Consensus 274 --d-~e~Le~al~~~~-tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lI 320 (531)
. .+.|++.+.+.. ...||+|.|... ++.+.++++++|+.+.
T Consensus 164 ~G~v~~~l~~~~~~~~~~~~vy~CGP~~M------~~~v~~~l~~~gv~~~ 208 (281)
T PRK06222 164 KGFVTDVLKELLESGKKVDRVVAIGPVIM------MKFVAELTKPYGIKTI 208 (281)
T ss_pred ccchHHHHHHHhhcCCCCcEEEEECCHHH------HHHHHHHHHhcCCCEE
Confidence 1 134444443211 346888877632 6778888888887643
No 462
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=30.62 E-value=1.5e+02 Score=26.62 Aligned_cols=67 Identities=13% Similarity=0.194 Sum_probs=43.7
Q ss_pred CccchHHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcC
Q 009604 248 CYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 316 (531)
Q Consensus 248 ~y~~t~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~g 316 (531)
.|.--.+++...++..|.++.....+ .++++.++..+++..+|.+.+-. +.....++++.+.+++.|
T Consensus 11 ~HdiGkniv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~g 78 (128)
T cd02072 11 CHAVGNKILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAG 78 (128)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCC
Confidence 34333455666788889999876544 56776665554458888884443 344456788888888765
No 463
>PRK14057 epimerase; Provisional
Probab=30.48 E-value=3.8e+02 Score=26.96 Aligned_cols=71 Identities=17% Similarity=0.189 Sum_probs=41.6
Q ss_pred eCCCCHHHHHHhccCCCcEEEEEeCCCCC--CCcccC---HHH---HHHHHHhcC--CEEEEeCCCCCCccccccccCCc
Q 009604 270 IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCVD---VKL---VSDLCHKKG--AIVCIDGTFATPLNQKALSLGAD 339 (531)
Q Consensus 270 vd~~d~e~Le~al~~~~tklV~lesP~NP--tG~v~d---l~~---I~~la~~~g--i~lIvD~a~a~~~~~~~l~~gaD 339 (531)
-+...++.++..+.. +.+|.+.+.+ | .|.-+- +++ +.++.+++| +.+-+|.-....-.....+.|+|
T Consensus 140 nP~Tp~e~i~~~l~~--vD~VLvMtV~-PGfgGQ~Fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGad 216 (254)
T PRK14057 140 CPATPLDVIIPILSD--VEVIQLLAVN-PGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGID 216 (254)
T ss_pred CCCCCHHHHHHHHHh--CCEEEEEEEC-CCCCchhccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCC
Confidence 345678899988864 5555554443 3 244331 334 444445554 77899986543323344567999
Q ss_pred EEEE
Q 009604 340 LVLH 343 (531)
Q Consensus 340 ivv~ 343 (531)
+++.
T Consensus 217 ~~V~ 220 (254)
T PRK14057 217 RVVS 220 (254)
T ss_pred EEEE
Confidence 7763
No 464
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=30.40 E-value=43 Score=36.74 Aligned_cols=31 Identities=16% Similarity=0.116 Sum_probs=27.3
Q ss_pred CCCCCCcccCHHHHHHHHHhcCCEEEEeCCC
Q 009604 295 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 325 (531)
Q Consensus 295 P~NPtG~v~dl~~I~~la~~~gi~lIvD~a~ 325 (531)
+....|+..|++++++.||++|+.||+|-++
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3445789999999999999999999999993
No 465
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=29.71 E-value=93 Score=26.38 Aligned_cols=10 Identities=20% Similarity=0.414 Sum_probs=6.1
Q ss_pred cEEEEEeCCC
Q 009604 287 VSLFFTESPT 296 (531)
Q Consensus 287 tklV~lesP~ 296 (531)
+.+|++.+|+
T Consensus 63 ~D~V~I~tp~ 72 (120)
T PF01408_consen 63 VDAVIIATPP 72 (120)
T ss_dssp ESEEEEESSG
T ss_pred CCEEEEecCC
Confidence 5566666665
No 466
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=29.59 E-value=3.2e+02 Score=26.51 Aligned_cols=44 Identities=25% Similarity=0.248 Sum_probs=30.7
Q ss_pred CCCCHH---HHHHhccCCCcEEEEEeCCCCCCCcc-cCHHHHHHHHHh
Q 009604 271 DPADME---GLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHK 314 (531)
Q Consensus 271 d~~d~e---~Le~al~~~~tklV~lesP~NPtG~v-~dl~~I~~la~~ 314 (531)
|..|++ .|.+++...++.+|+-.-..|+||.- .|-..+.++|.+
T Consensus 118 dvtdp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~s 165 (232)
T KOG4589|consen 118 DVTDPETYRKIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCDS 165 (232)
T ss_pred ccCCHHHHHHHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHHH
Confidence 344655 34455544457788877777999964 588899999975
No 467
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=29.58 E-value=96 Score=26.65 Aligned_cols=23 Identities=22% Similarity=0.120 Sum_probs=19.0
Q ss_pred CCCcccCHHHHHHHHHhcCCEEE
Q 009604 298 PFLRCVDVKLVSDLCHKKGAIVC 320 (531)
Q Consensus 298 PtG~v~dl~~I~~la~~~gi~lI 320 (531)
..|...++-++++.++++|+.+|
T Consensus 55 ~sG~t~e~~~~~~~a~~~g~~vi 77 (126)
T cd05008 55 QSGETADTLAALRLAKEKGAKTV 77 (126)
T ss_pred CCcCCHHHHHHHHHHHHcCCeEE
Confidence 46788888899999999987665
No 468
>cd00150 PlantTI Plant trypsin inhibitors such as squash trypsin inhibitor. Plant proteinase inhibitors play important roles in natural plant defense. Proteinase inhibitors from squash seeds form an uniform family of small proteins cross-linked with three disulfide bridges.
Probab=29.36 E-value=25 Score=22.52 Aligned_cols=15 Identities=40% Similarity=0.815 Sum_probs=12.4
Q ss_pred ccccccccCCCCcccccCCCCCC
Q 009604 8 SQKILSFSSSCSSFECRSDPDFS 30 (531)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~ 30 (531)
|||++ .+|..|.|-.
T Consensus 1 CPrIl--------m~Ck~DsDCl 15 (27)
T cd00150 1 CPRIL--------MECKRDSDCL 15 (27)
T ss_pred Ccchh--------eecccccccc
Confidence 78998 8999998853
No 469
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=29.34 E-value=83 Score=33.74 Aligned_cols=44 Identities=18% Similarity=0.187 Sum_probs=32.6
Q ss_pred HHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCC
Q 009604 277 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 324 (531)
Q Consensus 277 ~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a 324 (531)
.++++|.+ .++|++.-- --|.+.+.+.+.++|++.|+++++|--
T Consensus 136 ~~~~~l~~--~~~vVLSDY--~KG~L~~~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 136 KIKNALKS--FDALVLSDY--AKGVLTNVQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred HHHHHhhc--CCEEEEecc--ccccchhHHHHHHHHHHcCCcEEECCC
Confidence 34444443 577777322 257888899999999999999999974
No 470
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=29.30 E-value=1.5e+02 Score=26.67 Aligned_cols=67 Identities=13% Similarity=0.176 Sum_probs=44.9
Q ss_pred CccchHHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcC
Q 009604 248 CYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 316 (531)
Q Consensus 248 ~y~~t~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~g 316 (531)
.|.--...+...++..|.++.....+ .++++.++..+++..+|.+.+-. +.....++++.+.+++.|
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~--~~~~~~~~~~~~~l~~~g 80 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY--GHGEIDCKGLRQKCDEAG 80 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--ccCHHHHHHHHHHHHHCC
Confidence 34333455666788889999877654 56777666655458888884444 334446888888888875
No 471
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=28.97 E-value=2.3e+02 Score=29.02 Aligned_cols=52 Identities=8% Similarity=0.073 Sum_probs=33.9
Q ss_pred eCCCCHHHHHHhccCCCcEEEEEeCCC-CCCCcccC-----------HHHHHHHHHhcCCEEEE
Q 009604 270 IDPADMEGLEAALNNNNVSLFFTESPT-NPFLRCVD-----------VKLVSDLCHKKGAIVCI 321 (531)
Q Consensus 270 vd~~d~e~Le~al~~~~tklV~lesP~-NPtG~v~d-----------l~~I~~la~~~gi~lIv 321 (531)
+|..|.+.+.+.+++.++.+|+-+... +...--.+ -..|+++|++.|+++|-
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 566788888888876557777754332 22222222 24688999999988763
No 472
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=28.90 E-value=1.6e+02 Score=29.44 Aligned_cols=97 Identities=18% Similarity=0.244 Sum_probs=47.4
Q ss_pred HHHHHHHHHhcc-----CCCEEEEcCCCc-cchHHHHHhhcccCCcE-------EEEeCCCCHHHHHHhc-------cCC
Q 009604 226 SASTVMLLALVP-----AGGHIVTTTDCY-RKTRIFIETVLPKMGIT-------ATVIDPADMEGLEAAL-------NNN 285 (531)
Q Consensus 226 ~Ai~~al~all~-----pGD~VIv~~~~y-~~t~~~~~~~l~~~Gi~-------v~~vd~~d~e~Le~al-------~~~ 285 (531)
-++.+++...+. .+..++.-+.+. .+..++. +++++++.+ +.+....+.+++.+.+ .+.
T Consensus 54 l~l~l~~~~~l~~~~~g~~~~vvyidTe~~f~~~Rl~-~i~~~~~~~~~~~l~~I~v~~~~~~~~l~~~L~~l~~~l~~~ 132 (256)
T PF08423_consen 54 LCLQLAVNVQLPEEIGGLGGKVVYIDTEGTFSPERLQ-QIAERFGLDPEEILDNIFVIRVFDLEELLELLEQLPKLLSES 132 (256)
T ss_dssp HHHHHHHHTTSGGCTTSSSSEEEEEESSSSS-HHHHH-HHHHHTTS-HHHHHHTEEEEE-SSHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhhcccccccCCCceEEEeCCCCCCHHHHH-HHhhccccccchhhhceeeeecCCHHHHHHHHHHHHhhcccc
Confidence 356666665543 234454443333 3443333 344443321 2223334544443333 233
Q ss_pred CcEEEEEeCCCCCCC-------ccc----CH----HHHHHHHHhcCCEEEEeC
Q 009604 286 NVSLFFTESPTNPFL-------RCV----DV----KLVSDLCHKKGAIVCIDG 323 (531)
Q Consensus 286 ~tklV~lesP~NPtG-------~v~----dl----~~I~~la~~~gi~lIvD~ 323 (531)
++++|++.+...+.- ... .+ ..|..+|+++++.|++=|
T Consensus 133 ~ikLIVIDSIaalfr~e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVvvTN 185 (256)
T PF08423_consen 133 KIKLIVIDSIAALFRSEFSGRGDLAERQRMLARLARILKRLARKYNIAVVVTN 185 (256)
T ss_dssp CEEEEEEETSSHHHHHHSGSTTTHHHHHHHHHHHHHHHHHHHHHTT-EEEEEE
T ss_pred ceEEEEecchHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHhCCceEEeec
Confidence 599999999886531 111 11 246677889998776544
No 473
>PLN02591 tryptophan synthase
Probab=28.85 E-value=4e+02 Score=26.64 Aligned_cols=85 Identities=16% Similarity=0.145 Sum_probs=48.9
Q ss_pred hccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEe-CCC-CHHHHHHhccCCCcEEEEEeCCCCCCCcc----cCHHH
Q 009604 235 LVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPA-DMEGLEAALNNNNVSLFFTESPTNPFLRC----VDVKL 307 (531)
Q Consensus 235 ll~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~v-d~~-d~e~Le~al~~~~tklV~lesP~NPtG~v----~dl~~ 307 (531)
+.+.| |-||+++.-+.-...+ ...++..|+...++ .+. +.+.+++.... ....||+-+-...||.- .++++
T Consensus 102 ~~~aGv~GviipDLP~ee~~~~-~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~-~~gFIY~Vs~~GvTG~~~~~~~~~~~ 179 (250)
T PLN02591 102 IKEAGVHGLVVPDLPLEETEAL-RAEAAKNGIELVLLTTPTTPTERMKAIAEA-SEGFVYLVSSTGVTGARASVSGRVES 179 (250)
T ss_pred HHHcCCCEEEeCCCCHHHHHHH-HHHHHHcCCeEEEEeCCCCCHHHHHHHHHh-CCCcEEEeeCCCCcCCCcCCchhHHH
Confidence 33444 6788887666443333 34567778876544 233 44556655544 25677775656667753 33666
Q ss_pred HHHHHHhc-CCEEEE
Q 009604 308 VSDLCHKK-GAIVCI 321 (531)
Q Consensus 308 I~~la~~~-gi~lIv 321 (531)
+.+.++++ ++++++
T Consensus 180 ~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 180 LLQELKEVTDKPVAV 194 (250)
T ss_pred HHHHHHhcCCCceEE
Confidence 55555554 677776
No 474
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=28.83 E-value=1.3e+02 Score=31.43 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=57.2
Q ss_pred EEEeCChH--HHHHHHHHHhccCCCEEEEcCCCccchHHHHH---hh-cccCCcEEEEeCCCCHHHHHHhccCCCc-EEE
Q 009604 218 TVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIE---TV-LPKMGITATVIDPADMEGLEAALNNNNV-SLF 290 (531)
Q Consensus 218 ~i~~sSG~--~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~---~~-l~~~Gi~v~~vd~~d~e~Le~al~~~~t-klV 290 (531)
.+++++|. -.-.+++ .|++.|+.|++-++........+. .. .+..++.+...|..|.+.|++..+..+. .++
T Consensus 4 ~VLVtGgaGyiGsht~l-~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~ 82 (343)
T KOG1371|consen 4 HVLVTGGAGYIGSHTVL-ALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM 82 (343)
T ss_pred EEEEecCCcceehHHHH-HHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence 34455554 3333343 577889988887765444333232 22 2345688888899999999998876433 334
Q ss_pred EE-------eCCCCCCCccc----CHHHHHHHHHhcCCEEEE
Q 009604 291 FT-------ESPTNPFLRCV----DVKLVSDLCHKKGAIVCI 321 (531)
Q Consensus 291 ~l-------esP~NPtG~v~----dl~~I~~la~~~gi~lIv 321 (531)
.+ ++.-||+-..- ---.+.+.++++|..-+|
T Consensus 83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V 124 (343)
T KOG1371|consen 83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALV 124 (343)
T ss_pred eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEE
Confidence 33 22223311111 112466777888755444
No 475
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=28.60 E-value=2.5e+02 Score=27.85 Aligned_cols=54 Identities=15% Similarity=0.172 Sum_probs=35.2
Q ss_pred CcEEEEeCCCCHHHHHHhccC----CC-cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCE
Q 009604 264 GITATVIDPADMEGLEAALNN----NN-VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAI 318 (531)
Q Consensus 264 Gi~v~~vd~~d~e~Le~al~~----~~-tklV~lesP~NPtG~v~dl~~I~~la~~~gi~ 318 (531)
++++...|..|++.|.++++. .. ...|++..|..+ ........+.+.|++.|+.
T Consensus 40 ~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-~~~~~~~~~i~aa~~~gv~ 98 (285)
T TIGR03649 40 NEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP-DLAPPMIKFIDFARSKGVR 98 (285)
T ss_pred CCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC-ChhHHHHHHHHHHHHcCCC
Confidence 566666788899999988841 12 567776665432 2233456778888888873
No 476
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=28.48 E-value=3.1e+02 Score=29.47 Aligned_cols=96 Identities=20% Similarity=0.204 Sum_probs=49.9
Q ss_pred EEEeCChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCC
Q 009604 218 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 297 (531)
Q Consensus 218 ~i~~sSG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~N 297 (531)
+++++.|-+++.. ...+.+.|-.|...+.............+...|+++..-...+++.++..+.+ ..+|++ +|.-
T Consensus 3 v~viG~G~sG~s~-a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~--~d~vv~-s~gi 78 (459)
T PRK02705 3 AHVIGLGRSGIAA-ARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQ--PDLVVV-SPGI 78 (459)
T ss_pred EEEEccCHHHHHH-HHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhc--CCEEEE-CCCC
Confidence 5677777777765 45566778887777644332222211234556887754233344544455543 456665 4443
Q ss_pred CCCcccCHHHHHHHHHhcCCEEEEe
Q 009604 298 PFLRCVDVKLVSDLCHKKGAIVCID 322 (531)
Q Consensus 298 PtG~v~dl~~I~~la~~~gi~lIvD 322 (531)
| .|-. +.+.|++.|+.++-+
T Consensus 79 ~----~~~~-~~~~a~~~~i~v~~~ 98 (459)
T PRK02705 79 P----WDHP-TLVELRERGIEVIGE 98 (459)
T ss_pred C----CCCH-HHHHHHHcCCcEEEh
Confidence 3 2222 233345555555543
No 477
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=28.25 E-value=2.6e+02 Score=30.43 Aligned_cols=99 Identities=12% Similarity=0.173 Sum_probs=56.0
Q ss_pred HHHHHHHHhccCCCEE-EEcCCCccch-HHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccC
Q 009604 227 ASTVMLLALVPAGGHI-VTTTDCYRKT-RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 304 (531)
Q Consensus 227 Ai~~al~all~pGD~V-Iv~~~~y~~t-~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~d 304 (531)
+..++.......|..| +++.+.|... ...+.......|+++.. ..++..+.+.+.......|++.++..+.-....
T Consensus 240 aaKLA~~~~~~~G~~V~Lit~Dt~R~aA~eQLk~yAe~lgvp~~~--~~~~~~l~~~l~~~~~D~VLIDTaGr~~rd~~~ 317 (432)
T PRK12724 240 IAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFYP--VKDIKKFKETLARDGSELILIDTAGYSHRNLEQ 317 (432)
T ss_pred HHHHHHHHHHhcCCeEEEecccchhhhHHHHHHHHHHhcCCCeee--hHHHHHHHHHHHhCCCCEEEEeCCCCCccCHHH
Confidence 3333333334566655 4555556542 23334445566765432 234555555554334688999987755444455
Q ss_pred HHHHHHHHHh------cCCEEEEeCCCCC
Q 009604 305 VKLVSDLCHK------KGAIVCIDGTFAT 327 (531)
Q Consensus 305 l~~I~~la~~------~gi~lIvD~a~a~ 327 (531)
++++.++.+. ...+|++|.+...
T Consensus 318 l~eL~~~~~~~~~~~~~e~~LVLsAt~~~ 346 (432)
T PRK12724 318 LERMQSFYSCFGEKDSVENLLVLSSTSSY 346 (432)
T ss_pred HHHHHHHHHhhcCCCCCeEEEEEeCCCCH
Confidence 6677766653 2578999988654
No 478
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=27.76 E-value=1.6e+02 Score=24.81 Aligned_cols=45 Identities=13% Similarity=0.003 Sum_probs=29.3
Q ss_pred eCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEE
Q 009604 270 IDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 321 (531)
Q Consensus 270 vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIv 321 (531)
+..+..|.+..++... .++|+++ |...+-+.+.++|++.+++++.
T Consensus 46 t~gdR~di~~~a~~~~-i~~iIlt------g~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 46 TPGDREDIQLAAIEAG-IACIILT------GGLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp EETT-HHHHHHHCCTT-ECEEEEE------TT----HHHHHHHHHHT-EEEE
T ss_pred EeCCcHHHHHHHHHhC-CCEEEEe------CCCCCCHHHHHHHHHCCCEEEE
Confidence 3455667777777764 7888874 4445567899999999988875
No 479
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=27.58 E-value=4.1e+02 Score=26.21 Aligned_cols=91 Identities=10% Similarity=0.085 Sum_probs=45.7
Q ss_pred HHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEE-eCC-CCHHHHHHhccCCCcEEEEEeCCCCCCCccc----CH
Q 009604 233 LALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DV 305 (531)
Q Consensus 233 ~all~pG-D~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~-vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~v~----dl 305 (531)
..+.+.| |-|++++..+.-... +...++..|++... +.+ ...+.++..++.. ...|++.+.+..||.-. ++
T Consensus 98 ~~~~~aG~~giiipDl~~ee~~~-~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~~-~~~vy~~s~~g~tG~~~~~~~~~ 175 (242)
T cd04724 98 RDAKEAGVDGLIIPDLPPEEAEE-FREAAKEYGLDLIFLVAPTTPDERIKKIAELA-SGFIYYVSRTGVTGARTELPDDL 175 (242)
T ss_pred HHHHHCCCcEEEECCCCHHHHHH-HHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhC-CCCEEEEeCCCCCCCccCCChhH
Confidence 3334444 557766543322222 22456677776544 443 3456676666522 45666655554455322 23
Q ss_pred -HHHHHHHHhcCCEEEEeCCC
Q 009604 306 -KLVSDLCHKKGAIVCIDGTF 325 (531)
Q Consensus 306 -~~I~~la~~~gi~lIvD~a~ 325 (531)
+.|.++.+..++++++|.-.
T Consensus 176 ~~~i~~lr~~~~~pI~vggGI 196 (242)
T cd04724 176 KELIKRIRKYTDLPIAVGFGI 196 (242)
T ss_pred HHHHHHHHhcCCCcEEEEccC
Confidence 33344443346777776543
No 480
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=27.53 E-value=5.7e+02 Score=27.79 Aligned_cols=86 Identities=15% Similarity=0.185 Sum_probs=53.1
Q ss_pred HHhccCCCEEEEcCCCccchHHHHHhhcccCCcE---EEEeCCCCHHHHHHhccCCCcEEEEEeCCC---CCC-----Cc
Q 009604 233 LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVIDPADMEGLEAALNNNNVSLFFTESPT---NPF-----LR 301 (531)
Q Consensus 233 ~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~---v~~vd~~d~e~Le~al~~~~tklV~lesP~---NPt-----G~ 301 (531)
..+.+.+ .|++-.-+-... .++....++|+. +......+++++.+.+.+.+++++++.+.. ++. |.
T Consensus 115 ~~lA~~~-~vLYVsGEES~~--QiklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGs 191 (456)
T COG1066 115 ARLAKRG-KVLYVSGEESLQ--QIKLRADRLGLPTNNLYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGS 191 (456)
T ss_pred HHHHhcC-cEEEEeCCcCHH--HHHHHHHHhCCCccceEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCc
Confidence 3455566 565544443332 233345566643 222344689999998887678999988775 232 54
Q ss_pred ccCH----HHHHHHHHhcCCEEEE
Q 009604 302 CVDV----KLVSDLCHKKGAIVCI 321 (531)
Q Consensus 302 v~dl----~~I~~la~~~gi~lIv 321 (531)
+..+ .++.++|++.|+.+++
T Consensus 192 VsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 192 VSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEE
Confidence 4433 4788899999987665
No 481
>PRK05802 hypothetical protein; Provisional
Probab=27.25 E-value=2.1e+02 Score=29.55 Aligned_cols=97 Identities=13% Similarity=0.266 Sum_probs=51.6
Q ss_pred CcEEEeCChH--HHHHHHHHHhccCCCEEEE--cCCCccchHHHHHhhcccCCcEEE---EeCCC-----CHHHHHHhcc
Q 009604 216 ESTVIMASGM--SASTVMLLALVPAGGHIVT--TTDCYRKTRIFIETVLPKMGITAT---VIDPA-----DMEGLEAALN 283 (531)
Q Consensus 216 e~~i~~sSG~--~Ai~~al~all~pGD~VIv--~~~~y~~t~~~~~~~l~~~Gi~v~---~vd~~-----d~e~Le~al~ 283 (531)
...+++++|+ +-+..++..+++.+.+|.+ ...... ..++...++.+..++. +++.. ..+.+.+.++
T Consensus 173 ~~~llIaGGiGIaPl~~l~~~l~~~~~~v~li~g~r~~~--~~~~~~el~~~~~~~~~~~~~ddG~~~~~~~g~v~~~l~ 250 (320)
T PRK05802 173 GKSLVIARGIGQAPGVPVIKKLYSNGNKIIVIIDKGPFK--NNFIKEYLELYNIEIIELNLLDDGELSEEGKDILKEIIK 250 (320)
T ss_pred CeEEEEEeEEeHHHHHHHHHHHHHcCCcEEEEEeCCCHH--HHHHHHHHHHhhCceEEEEecccCCCCccccchHHHHhc
Confidence 4677777775 6677777777665544332 111111 1123333433332221 12211 1234555554
Q ss_pred CCCcEEEEEeCCCCCCCcccCHHHHHHHHHh--cCCEEE
Q 009604 284 NNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVC 320 (531)
Q Consensus 284 ~~~tklV~lesP~NPtG~v~dl~~I~~la~~--~gi~lI 320 (531)
+.....||++.|..+ ++++.+++++ +|+.+.
T Consensus 251 ~~~~~~vy~CGP~~M------~k~v~~~l~~~~~~i~~~ 283 (320)
T PRK05802 251 KEDINLIHCGGSDIL------HYKIIEYLDKLNEKIKLS 283 (320)
T ss_pred CCCCCEEEEECCHHH------HHHHHHHHhhhcCCceEE
Confidence 433578999888743 6788888887 677654
No 482
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=27.16 E-value=51 Score=36.90 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=29.0
Q ss_pred CCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCC
Q 009604 294 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 326 (531)
Q Consensus 294 sP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a 326 (531)
.|....|...+++++++.||++|+.||+|-++.
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~N 183 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGLGLGVILDVVYN 183 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 466678888899999999999999999999864
No 483
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=27.06 E-value=1.1e+02 Score=27.98 Aligned_cols=49 Identities=18% Similarity=0.243 Sum_probs=38.8
Q ss_pred HHHHHhccCCCc-EEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCC
Q 009604 276 EGLEAALNNNNV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 324 (531)
Q Consensus 276 e~Le~al~~~~t-klV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a 324 (531)
.++-+.+.+++. .+||+.-|-++-..-.|+++|.++|.-|++++-..-+
T Consensus 63 qQIga~Ia~g~id~vIFf~DPl~~~phepDi~aLlRlc~v~nIP~AtN~a 112 (143)
T TIGR00160 63 QQIGALIAEGKIDAVIFFWDPLNAQPHEPDVKALLRLCTVWNIPLATNVA 112 (143)
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCCCcCHHHHHHHHHhhCcccccCHH
Confidence 466666655444 4778888988888889999999999999999866554
No 484
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=26.85 E-value=2.6e+02 Score=29.92 Aligned_cols=76 Identities=16% Similarity=0.159 Sum_probs=43.0
Q ss_pred cCCCEEEEcCCCccchH-----HHHHhhcccCCcEEEE-eC---CCCHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHH
Q 009604 237 PAGGHIVTTTDCYRKTR-----IFIETVLPKMGITATV-ID---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKL 307 (531)
Q Consensus 237 ~pGD~VIv~~~~y~~t~-----~~~~~~l~~~Gi~v~~-vd---~~d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~ 307 (531)
++||.|+.+.+.-.+.. .++...+.+.|+++.. +. ..+.++|+..++--+++.++ |. .|....+.+
T Consensus 317 ~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~i---pv--Hge~~~~~~ 391 (422)
T TIGR00649 317 RKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYII---PV--HGEYRMLIN 391 (422)
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEE---ec--CCcHHHHHH
Confidence 47898888876666544 2222145566776533 11 23455555554321245454 22 266666778
Q ss_pred HHHHHHhcCC
Q 009604 308 VSDLCHKKGA 317 (531)
Q Consensus 308 I~~la~~~gi 317 (531)
.++++++.|+
T Consensus 392 ~~~~a~~~g~ 401 (422)
T TIGR00649 392 HTKLAEEEGY 401 (422)
T ss_pred HHHHHHHcCC
Confidence 8888887775
No 485
>PLN00191 enolase
Probab=26.82 E-value=3.9e+02 Score=29.34 Aligned_cols=98 Identities=8% Similarity=-0.006 Sum_probs=64.6
Q ss_pred ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--CCHHHHHHhccCCCcEEEEEeCCCCCCC
Q 009604 223 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFL 300 (531)
Q Consensus 223 SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--~d~e~Le~al~~~~tklV~lesP~NPtG 300 (531)
+..+++... ..++.+-+.+.+.+|.....+..+..+-+...+.+.--+. .+++.+++.++.+-..+|.+ =.|-.|
T Consensus 296 s~~e~i~~~-~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~i--Kl~qiG 372 (457)
T PLN00191 296 SGDELIDLY-KEFVSDYPIVSIEDPFDQDDWEHWAKLTSLEDVQIVGDDLLVTNPKRVAKAIQEKACNALLL--KVNQIG 372 (457)
T ss_pred CHHHHHHHH-HHHhhcCCcEEEECCCCcccHHHHHHHHccCCCcEEccCcccCCHHHHHHHHHhCCCCEEEe--cccccC
Confidence 344555443 4455545567888888766666665554444455432232 46888998887653455554 235678
Q ss_pred cccCHHHHHHHHHhcCCEEEEeC
Q 009604 301 RCVDVKLVSDLCHKKGAIVCIDG 323 (531)
Q Consensus 301 ~v~dl~~I~~la~~~gi~lIvD~ 323 (531)
.+.+..+++++|+++|+.+++-.
T Consensus 373 GITea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 373 TVTESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred CHHHHHHHHHHHHHCCCEEEeCC
Confidence 99999999999999999998743
No 486
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=26.63 E-value=4.1e+02 Score=26.20 Aligned_cols=107 Identities=15% Similarity=0.210 Sum_probs=56.5
Q ss_pred HHhccCC-CEEEEcCC-CccchHHHHHhhcccCCcEEEE--eCCCCHHHHHHhccCCCcEEEEEeCCCCC--CCcccC--
Q 009604 233 LALVPAG-GHIVTTTD-CYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCVD-- 304 (531)
Q Consensus 233 ~all~pG-D~VIv~~~-~y~~t~~~~~~~l~~~Gi~v~~--vd~~d~e~Le~al~~~~tklV~lesP~NP--tG~v~d-- 304 (531)
..+.+.| |.|.+.-- +.......+ ..++..|++.-. -+...++.++..|.. ..+|.+.+.+ | .|..+-
T Consensus 76 ~~~~~aGad~it~H~Ea~~~~~~~~i-~~Ik~~G~kaGlalnP~T~~~~l~~~l~~--vD~VLvMsV~-PGf~GQ~fi~~ 151 (229)
T PRK09722 76 DQLADAGADFITLHPETINGQAFRLI-DEIRRAGMKVGLVLNPETPVESIKYYIHL--LDKITVMTVD-PGFAGQPFIPE 151 (229)
T ss_pred HHHHHcCCCEEEECccCCcchHHHHH-HHHHHcCCCEEEEeCCCCCHHHHHHHHHh--cCEEEEEEEc-CCCcchhccHH
Confidence 4455555 55555433 111122333 334555655432 244678888888864 5555554443 4 244332
Q ss_pred ----HHHHHHHHHhcC--CEEEEeCCCCCCccccccccCCcEEEE
Q 009604 305 ----VKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLH 343 (531)
Q Consensus 305 ----l~~I~~la~~~g--i~lIvD~a~a~~~~~~~l~~gaDivv~ 343 (531)
++++.++.+++| +.+-+|.-....-.....+.|+|+++-
T Consensus 152 ~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~~i~~~~~aGad~~V~ 196 (229)
T PRK09722 152 MLDKIAELKALRERNGLEYLIEVDGSCNQKTYEKLMEAGADVFIV 196 (229)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 334444444554 778899864432223445679998773
No 487
>PLN02535 glycolate oxidase
Probab=26.47 E-value=2.3e+02 Score=30.08 Aligned_cols=79 Identities=20% Similarity=0.210 Sum_probs=51.7
Q ss_pred ccCCcEEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCCCcccC-----HHHHHHHHHhc--CCEEEEeCCCCCCcc-cc
Q 009604 261 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-----VKLVSDLCHKK--GAIVCIDGTFATPLN-QK 332 (531)
Q Consensus 261 ~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~v~d-----l~~I~~la~~~--gi~lIvD~a~a~~~~-~~ 332 (531)
+..+.++..-...+.++.+.+++.. ...|.+.+ .-|...| ++.|.++.+.. +++||.|.-...+.. .+
T Consensus 220 ~~~~~PvivKgV~~~~dA~~a~~~G-vD~I~vsn---~GGr~~d~~~~t~~~L~ev~~av~~~ipVi~dGGIr~g~Dv~K 295 (364)
T PLN02535 220 SITNLPILIKGVLTREDAIKAVEVG-VAGIIVSN---HGARQLDYSPATISVLEEVVQAVGGRVPVLLDGGVRRGTDVFK 295 (364)
T ss_pred hccCCCEEEecCCCHHHHHHHHhcC-CCEEEEeC---CCcCCCCCChHHHHHHHHHHHHHhcCCCEEeeCCCCCHHHHHH
Confidence 3345555443456788888777764 88888743 3354444 67777776654 699999987665543 46
Q ss_pred ccccCCcEEEE
Q 009604 333 ALSLGADLVLH 343 (531)
Q Consensus 333 ~l~~gaDivv~ 343 (531)
.+.+|+|.|..
T Consensus 296 ALalGA~aV~v 306 (364)
T PLN02535 296 ALALGAQAVLV 306 (364)
T ss_pred HHHcCCCEEEE
Confidence 67888887653
No 488
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=26.37 E-value=3.4e+02 Score=28.22 Aligned_cols=77 Identities=21% Similarity=0.150 Sum_probs=45.3
Q ss_pred cEEEEeCCCCHHHHHHhccCCCcEEEEEe-CCCC------CCCc-ccC---HHHHHHHHHhcCCEEEEeCCCCCC-cccc
Q 009604 265 ITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PFLR-CVD---VKLVSDLCHKKGAIVCIDGTFATP-LNQK 332 (531)
Q Consensus 265 i~v~~vd~~d~e~Le~al~~~~tklV~le-sP~N------PtG~-v~d---l~~I~~la~~~gi~lIvD~a~a~~-~~~~ 332 (531)
+.+..-+..+.+..+++++.. ...|.+. .|.. .+|. ..+ +.++.+.++++++++|.|.=..++ -..+
T Consensus 136 v~Vi~G~v~t~~~A~~l~~aG-aD~I~vg~g~G~~~~t~~~~g~g~p~~~~i~~v~~~~~~~~vpVIA~GGI~~~~di~k 214 (325)
T cd00381 136 VDVIAGNVVTAEAARDLIDAG-ADGVKVGIGPGSICTTRIVTGVGVPQATAVADVAAAARDYGVPVIADGGIRTSGDIVK 214 (325)
T ss_pred ceEEECCCCCHHHHHHHHhcC-CCEEEECCCCCcCcccceeCCCCCCHHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHH
Confidence 554433556778777777654 6777652 1210 1111 123 345566677779999988765543 2345
Q ss_pred ccccCCcEEE
Q 009604 333 ALSLGADLVL 342 (531)
Q Consensus 333 ~l~~gaDivv 342 (531)
.+.+|+|.|+
T Consensus 215 Ala~GA~~Vm 224 (325)
T cd00381 215 ALAAGADAVM 224 (325)
T ss_pred HHHcCCCEEE
Confidence 6778998765
No 489
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=26.37 E-value=5.4e+02 Score=25.81 Aligned_cols=44 Identities=27% Similarity=0.215 Sum_probs=27.4
Q ss_pred CCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEEC
Q 009604 297 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 344 (531)
Q Consensus 297 NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S 344 (531)
...|...++.++++.|+++|+.+|. -+.....++..-+|+++..
T Consensus 195 S~sG~t~~~~~~~~~ak~~g~~ii~----IT~~~~s~la~~ad~~l~~ 238 (292)
T PRK11337 195 SHSGRTSDVIEAVELAKKNGAKIIC----ITNSYHSPIAKLADYVICS 238 (292)
T ss_pred eCCCCCHHHHHHHHHHHHCCCeEEE----EeCCCCChhHHhCCEEEEc
Confidence 3457777788999999999976653 1111223344347777653
No 490
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=26.18 E-value=4.5e+02 Score=28.96 Aligned_cols=112 Identities=19% Similarity=0.130 Sum_probs=64.3
Q ss_pred HHHHHhccCCCEEEEcCCCccchHHHHH--hhccc-C-CcEEEEeCCCCHHHHHHhccCCCcEEEEE-------eCCCCC
Q 009604 230 VMLLALVPAGGHIVTTTDCYRKTRIFIE--TVLPK-M-GITATVIDPADMEGLEAALNNNNVSLFFT-------ESPTNP 298 (531)
Q Consensus 230 ~al~all~pGD~VIv~~~~y~~t~~~~~--~~l~~-~-Gi~v~~vd~~d~e~Le~al~~~~tklV~l-------esP~NP 298 (531)
..+..|+..|-.+|+-+..|+-.....+ ..++. + ++++..=...+.+..+++++.. ...|-+ |+-...
T Consensus 228 ~ra~~Lv~aGVd~i~~D~a~g~~~~~~~~i~~i~~~~~~~~vi~g~~~t~~~~~~l~~~G-~d~i~vg~g~Gs~~ttr~~ 306 (475)
T TIGR01303 228 GKAKALLDAGVDVLVIDTAHGHQVKMISAIKAVRALDLGVPIVAGNVVSAEGVRDLLEAG-ANIIKVGVGPGAMCTTRMM 306 (475)
T ss_pred HHHHHHHHhCCCEEEEeCCCCCcHHHHHHHHHHHHHCCCCeEEEeccCCHHHHHHHHHhC-CCEEEECCcCCccccCccc
Confidence 3445667778666666666654332222 11222 2 4555432356788888877654 555541 122233
Q ss_pred CCccc----CHHHHHHHHHhcCCEEEEeCCCCCC-ccccccccCCcEEE
Q 009604 299 FLRCV----DVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 342 (531)
Q Consensus 299 tG~v~----dl~~I~~la~~~gi~lIvD~a~a~~-~~~~~l~~gaDivv 342 (531)
+|.-. .+-++++.++++++++|.|.-.-.+ -..+.+..|+|.|+
T Consensus 307 ~~~g~~~~~a~~~~~~~~~~~~~~viadGgi~~~~di~kala~GA~~vm 355 (475)
T TIGR01303 307 TGVGRPQFSAVLECAAEARKLGGHVWADGGVRHPRDVALALAAGASNVM 355 (475)
T ss_pred cCCCCchHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCCEEe
Confidence 33222 2345555668889999999876544 33567888999877
No 491
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=25.99 E-value=1.9e+02 Score=29.97 Aligned_cols=37 Identities=19% Similarity=0.099 Sum_probs=27.7
Q ss_pred EEEEEeCCCCCCCcccC-HHHHHHHHHhcCCEEEEeCCC
Q 009604 288 SLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTF 325 (531)
Q Consensus 288 klV~lesP~NPtG~v~d-l~~I~~la~~~gi~lIvD~a~ 325 (531)
.+|++ +-+=|-|...| +.+|.++|++.|+.+++|..-
T Consensus 131 d~Vvl-sGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 131 DIVVL-SGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CEEEE-eCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 45555 33346666655 789999999999999999873
No 492
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=25.95 E-value=1.1e+02 Score=27.59 Aligned_cols=56 Identities=20% Similarity=0.224 Sum_probs=39.9
Q ss_pred CCHHHHHHhccCCCcEEEEEeCCCCCCCcccC----HHHHHH-HHHhc-CCEE-EEeCCCCCC
Q 009604 273 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSD-LCHKK-GAIV-CIDGTFATP 328 (531)
Q Consensus 273 ~d~e~Le~al~~~~tklV~lesP~NPtG~v~d----l~~I~~-la~~~-gi~l-IvD~a~a~~ 328 (531)
.+.+.|.+.++++++..|++-.|.|..|..-+ +.+.++ +.++. +++| .+||-+.+-
T Consensus 38 ~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT~ 100 (135)
T PF03652_consen 38 KDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTTK 100 (135)
T ss_dssp CCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSHH
T ss_pred hHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhHH
Confidence 47889999998777889999999999888765 233333 33444 7764 589987654
No 493
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=25.70 E-value=2.3e+02 Score=26.63 Aligned_cols=59 Identities=22% Similarity=0.153 Sum_probs=32.5
Q ss_pred cccCCcEEEEeCCCC----------HHHHHHhcc----CCCc-EEEEEeCCCCCCCcccC--HHHHHHHHHhcCCEEEE
Q 009604 260 LPKMGITATVIDPAD----------MEGLEAALN----NNNV-SLFFTESPTNPFLRCVD--VKLVSDLCHKKGAIVCI 321 (531)
Q Consensus 260 l~~~Gi~v~~vd~~d----------~e~Le~al~----~~~t-klV~lesP~NPtG~v~d--l~~I~~la~~~gi~lIv 321 (531)
++..|++...+|.++ .+++++.++ .... +++++ +|-.|...| -++...+.+..|++++.
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~Iv---SNsaGs~~d~~~~~a~~~~~~lgIpvl~ 111 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIV---SNSAGSSDDPDGERAEALEKALGIPVLR 111 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEE---ECCCCcccCccHHHHHHHHHhhCCcEEE
Confidence 677888888777542 122322222 1111 34444 555566654 45666667777777654
No 494
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=25.41 E-value=4.8e+02 Score=27.69 Aligned_cols=85 Identities=13% Similarity=0.217 Sum_probs=47.9
Q ss_pred hccCCCEEEEcCCCccchHHHHHhhcccCCcE---EEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCC--------Cccc
Q 009604 235 LVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVIDPADMEGLEAALNNNNVSLFFTESPTNPF--------LRCV 303 (531)
Q Consensus 235 ll~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi~---v~~vd~~d~e~Le~al~~~~tklV~lesP~NPt--------G~v~ 303 (531)
+.+.|..|++-..+... ..+...+.++|+. +..+...+++.+.+.+...++++|++.+.++.. |.+.
T Consensus 106 ~a~~g~~VlYvs~EEs~--~qi~~Ra~rlg~~~~~l~l~~e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~ 183 (372)
T cd01121 106 LAKRGGKVLYVSGEESP--EQIKLRADRLGISTENLYLLAETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVS 183 (372)
T ss_pred HHhcCCeEEEEECCcCH--HHHHHHHHHcCCCcccEEEEccCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHH
Confidence 44555666554333221 1222223344432 333445678888888876568999998876432 1122
Q ss_pred C----HHHHHHHHHhcCCEEEE
Q 009604 304 D----VKLVSDLCHKKGAIVCI 321 (531)
Q Consensus 304 d----l~~I~~la~~~gi~lIv 321 (531)
. +..|.++++++|+.+++
T Consensus 184 qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 184 QVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred HHHHHHHHHHHHHHHcCCeEEE
Confidence 1 24577889999987654
No 495
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=25.39 E-value=3.9e+02 Score=26.35 Aligned_cols=99 Identities=10% Similarity=0.072 Sum_probs=46.7
Q ss_pred CEEEEcCCCcc---chHHHHHhhcccCCcEEEE-eCC-CCHHHHHHhccCCCcEEEEEeCCCCCCCcccC--HHHHHHHH
Q 009604 240 GHIVTTTDCYR---KTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD--VKLVSDLC 312 (531)
Q Consensus 240 D~VIv~~~~y~---~t~~~~~~~l~~~Gi~v~~-vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~v~d--l~~I~~la 312 (531)
|.|++++..+. -...++ ..++..|+++.. +.+ .+.+.++..++.. ..++++ +.++-+|...+ +....+.+
T Consensus 103 dgvii~dlp~e~~~~~~~~~-~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~-~~~l~m-sv~~~~g~~~~~~~~~~i~~l 179 (244)
T PRK13125 103 DGVLFPDLLIDYPDDLEKYV-EIIKNKGLKPVFFTSPKFPDLLIHRLSKLS-PLFIYY-GLRPATGVPLPVSVERNIKRV 179 (244)
T ss_pred CEEEECCCCCCcHHHHHHHH-HHHHHcCCCEEEEECCCCCHHHHHHHHHhC-CCEEEE-EeCCCCCCCchHHHHHHHHHH
Confidence 66776643221 112222 445667776543 333 4577777777653 345555 55555665432 22222223
Q ss_pred Hhc--CCEEEEeCCCCCCccccc-cccCCcEE
Q 009604 313 HKK--GAIVCIDGTFATPLNQKA-LSLGADLV 341 (531)
Q Consensus 313 ~~~--gi~lIvD~a~a~~~~~~~-l~~gaDiv 341 (531)
++. +..+++|.--.++-.... ...|+|.+
T Consensus 180 r~~~~~~~i~v~gGI~~~e~i~~~~~~gaD~v 211 (244)
T PRK13125 180 RNLVGNKYLVVGFGLDSPEDARDALSAGADGV 211 (244)
T ss_pred HHhcCCCCEEEeCCcCCHHHHHHHHHcCCCEE
Confidence 332 355666654322212222 34556643
No 496
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.23 E-value=3.4e+02 Score=26.99 Aligned_cols=105 Identities=19% Similarity=0.256 Sum_probs=58.9
Q ss_pred CCCcEEEeC--ChHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEeCCCCHHHHHHhccC---CC
Q 009604 214 GAESTVIMA--SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADMEGLEAALNN---NN 286 (531)
Q Consensus 214 g~e~~i~~s--SG~~Ai~~al~all~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi--~v~~vd~~d~e~Le~al~~---~~ 286 (531)
+++.++-++ +|.+|+..++ .+.++.+|+.-+..... +.+...+.+..|+ ++.++.....+.|.+.+.+ ..
T Consensus 73 ~ak~~lelGvfTGySaL~~Al--alp~dGrv~a~eid~~~-~~~~~~~~k~agv~~KI~~i~g~a~esLd~l~~~~~~~t 149 (237)
T KOG1663|consen 73 NAKRTLELGVFTGYSALAVAL--ALPEDGRVVAIEIDADA-YEIGLELVKLAGVDHKITFIEGPALESLDELLADGESGT 149 (237)
T ss_pred CCceEEEEecccCHHHHHHHH--hcCCCceEEEEecChHH-HHHhHHHHHhccccceeeeeecchhhhHHHHHhcCCCCc
Confidence 677777544 4666666654 24556676665433322 2222233333344 4556655556666666644 23
Q ss_pred cEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCC
Q 009604 287 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 324 (531)
Q Consensus 287 tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a 324 (531)
-.++|+..== .-.....++..++.+ .|-++++||+
T Consensus 150 fDfaFvDadK--~nY~~y~e~~l~Llr-~GGvi~~DNv 184 (237)
T KOG1663|consen 150 FDFAFVDADK--DNYSNYYERLLRLLR-VGGVIVVDNV 184 (237)
T ss_pred eeEEEEccch--HHHHHHHHHHHhhcc-cccEEEEecc
Confidence 5788874321 112234677777776 4888999998
No 497
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=25.20 E-value=37 Score=32.14 Aligned_cols=82 Identities=21% Similarity=0.270 Sum_probs=48.1
Q ss_pred CHHHHHHhccCCCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEEEEeCCCCCCccccccccCCcEEEECCccccccCC
Q 009604 274 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHN 353 (531)
Q Consensus 274 d~e~Le~al~~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~gaDivv~S~sK~lgg~g 353 (531)
+.++|+.+++.. ...||+ -+|.+..++.+.+.+|++|-.+++.-=.-.++..+. .|. +|+...+
T Consensus 8 ~~~~l~~al~s~-~~~vfL-----l~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~~D~--~~i--------~~L~~~~ 71 (175)
T PF04309_consen 8 DEEDLEKALESD-VEVVFL-----LTGDIGNLKDIVKRLKAAGKKVFVHIDLIEGLSRDE--AGI--------EYLKEYG 71 (175)
T ss_dssp CCCCCCCCCCSS-SSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGEETB-SSH--HHH--------HHHHHTT
T ss_pred CHHHHHHHHcCC-CCEEEE-----EcCcHHHHHHHHHHHHHcCCEEEEEehhcCCCCCCH--HHH--------HHHHHcC
Confidence 445667777763 777887 248889999999999999865554322222222221 111 2222211
Q ss_pred CceEEEEEeChHHHHHHHH
Q 009604 354 DVLAGSISGSGKLVTQIRN 372 (531)
Q Consensus 354 ~v~gG~iv~~~~li~~l~~ 372 (531)
. .-|++.++..++...+.
T Consensus 72 ~-~dGIISTk~~~i~~Ak~ 89 (175)
T PF04309_consen 72 K-PDGIISTKSNLIKRAKK 89 (175)
T ss_dssp ---SEEEESSHHHHHHHHH
T ss_pred C-CcEEEeCCHHHHHHHHH
Confidence 1 13888888888877665
No 498
>PRK11823 DNA repair protein RadA; Provisional
Probab=25.10 E-value=4e+02 Score=29.00 Aligned_cols=84 Identities=14% Similarity=0.261 Sum_probs=47.7
Q ss_pred ccCCCEEEEcCCCccchHHHHHhhcccCCc---EEEEeCCCCHHHHHHhccCCCcEEEEEeCCCCCC--------CcccC
Q 009604 236 VPAGGHIVTTTDCYRKTRIFIETVLPKMGI---TATVIDPADMEGLEAALNNNNVSLFFTESPTNPF--------LRCVD 304 (531)
Q Consensus 236 l~pGD~VIv~~~~y~~t~~~~~~~l~~~Gi---~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPt--------G~v~d 304 (531)
.+.|..+++-..+-. ...+...+.++|+ ++......+++++.+.+++.++++|++.+.+... |....
T Consensus 105 a~~g~~vlYvs~Ees--~~qi~~ra~rlg~~~~~l~~~~e~~l~~i~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~q 182 (446)
T PRK11823 105 AAAGGKVLYVSGEES--ASQIKLRAERLGLPSDNLYLLAETNLEAILATIEEEKPDLVVIDSIQTMYSPELESAPGSVSQ 182 (446)
T ss_pred HhcCCeEEEEEcccc--HHHHHHHHHHcCCChhcEEEeCCCCHHHHHHHHHhhCCCEEEEechhhhccccccCCCCCHHH
Confidence 345666655433321 1222222344443 2333445678888888876568999999887532 12212
Q ss_pred ----HHHHHHHHHhcCCEEEE
Q 009604 305 ----VKLVSDLCHKKGAIVCI 321 (531)
Q Consensus 305 ----l~~I~~la~~~gi~lIv 321 (531)
+..|.++++++|+.+++
T Consensus 183 vr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 183 VRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred HHHHHHHHHHHHHHcCCEEEE
Confidence 23577889999986554
No 499
>cd06219 DHOD_e_trans_like1 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group, as in flavoenzymes, or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD,
Probab=25.02 E-value=4.8e+02 Score=25.53 Aligned_cols=96 Identities=19% Similarity=0.247 Sum_probs=46.2
Q ss_pred CCcEEEeCChH--HHHHHHHHHhccCCCEEEEcCCCccc---hHHHHHhhcccCCcEEEEe-CC-------CCHHHHHHh
Q 009604 215 AESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRK---TRIFIETVLPKMGITATVI-DP-------ADMEGLEAA 281 (531)
Q Consensus 215 ~e~~i~~sSG~--~Ai~~al~all~pGD~VIv~~~~y~~---t~~~~~~~l~~~Gi~v~~v-d~-------~d~e~Le~a 281 (531)
....+++++|+ +.+..++..+.+.+..|.+- |+. ...++...+..+..++... +. .-.+.+.+.
T Consensus 97 ~~~~lliagG~GiaP~~~~l~~~~~~~~~v~l~---~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~~~~g~v~~~l~~~ 173 (248)
T cd06219 97 YGTVVFVGGGVGIAPIYPIAKALKEAGNRVITI---IGARTKDLVILEDEFRAVSDELIITTDDGSYGEKGFVTDPLKEL 173 (248)
T ss_pred CCeEEEEeCcccHHHHHHHHHHHHHcCCeEEEE---EEcCCHHHhhhHHHHHhhcCeEEEEeCCCCCCccccchHHHHHH
Confidence 34577777776 67777777776655443321 111 0011112222222122111 11 112455555
Q ss_pred ccC-CCcEEEEEeCCCCCCCcccCHHHHHHHHHhcCCEE
Q 009604 282 LNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV 319 (531)
Q Consensus 282 l~~-~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~l 319 (531)
+.+ .....||++.|... ++.+.+.+++.|+..
T Consensus 174 ~~~~~~~~~vyiCGP~~m------~~~~~~~l~~~Gv~~ 206 (248)
T cd06219 174 IESGEKVDLVIAIGPPIM------MKAVSELTRPYGIPT 206 (248)
T ss_pred HhccCCccEEEEECCHHH------HHHHHHHHHHcCCCE
Confidence 522 12357888877732 556667777777653
No 500
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=25.02 E-value=5.4e+02 Score=24.40 Aligned_cols=55 Identities=18% Similarity=0.146 Sum_probs=31.2
Q ss_pred EEEeCCCCHHHHHHhcc-------CCCcEEEEEeCCCCCCCcc-----------cC----HHHHHHHHHhcCCEEEE
Q 009604 267 ATVIDPADMEGLEAALN-------NNNVSLFFTESPTNPFLRC-----------VD----VKLVSDLCHKKGAIVCI 321 (531)
Q Consensus 267 v~~vd~~d~e~Le~al~-------~~~tklV~lesP~NPtG~v-----------~d----l~~I~~la~~~gi~lIv 321 (531)
+.+++..+.+++...++ +.++++|++.+.+...... .. +..|.++|+++++.+++
T Consensus 88 i~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 88 IYVARPYNGEQQLEIVEELERIMSSGRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHhhcCCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 33445555554443332 3358899998877532110 01 23467778899987665
Done!