Your job contains 1 sequence.
>009607
MVLYDSATSGGSNSGSSSSCSGTKQPVAEIDGLLAGAGYKVRSSELRQVAQRLERLETVM
VNSPADISQLASDTVHYNPSDLASWVDSLLSEFNQPPLPLPSDLPDLPDIIAGPSVNHTA
VGNYLTDNFTTTQQQQQQQQQMMIVTAMEEDSGIRLVHMLMTCAESVQRGEMAVAGSLIE
DMKGLLTRVNPSCGIGKVAGCFIDALSFRIMGVGGSICGSVSENEILYHHFYEACPYLKF
AHFTANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPD
GRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKL
LGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEA
CPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQ
ASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAWHAVPDVMMSHQNSN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009607
(531 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 935 5.5e-113 2
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 1091 1.8e-110 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 837 2.2e-101 2
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 1000 7.9e-101 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 795 2.6e-96 2
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 523 1.8e-52 2
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 484 3.8e-46 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 477 2.1e-45 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 445 7.5e-44 2
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 448 2.5e-42 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 444 6.6e-42 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 265 1.6e-41 2
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 439 3.8e-41 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 399 3.9e-37 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 396 1.1e-36 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 395 7.2e-36 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 364 2.8e-33 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 369 3.4e-33 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 364 5.3e-33 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 351 3.4e-31 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 338 5.0e-30 2
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 319 6.6e-27 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 322 1.2e-26 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 297 6.5e-24 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 278 1.3e-21 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 275 4.2e-21 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 266 7.7e-21 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 265 5.4e-20 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 232 1.5e-16 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 231 1.7e-16 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 226 5.5e-16 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 155 2.2e-10 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 148 1.2e-09 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 141 2.2e-06 1
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 935 (334.2 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 191/403 (47%), Positives = 260/403 (64%)
Query: 121 VGNYLTDNFXXXXXXXXXXXXMMIVTAMEEDSGIRLVHMLMTCAESVQRGEMAVAGSLIE 180
+G +T +++V + E +G+RLVH LM CAE++Q+ + +A +L++
Sbjct: 188 IGTTVTTTTTTTTAAGESTRSVILVDSQE--NGVRLVHALMACAEAIQQNNLTLAEALVK 245
Query: 181 DMKGLLTRVNPSCGIGKVAGCFIDALSFRIMGVG---GSICGSVSENEILYHHFYEACPY 237
+ G L V+ + + KVA F +AL+ RI + I +S+ L HFYE CPY
Sbjct: 246 QI-GCLA-VSQAGAMRKVATYFAEALARRIYRLSPPQNQIDHCLSDT--LQMHFYETCPY 301
Query: 238 LKFAHFTANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXX 297
LKFAHFTANQAILEAF+G VHV+DF++ GLQWPAL+Q
Sbjct: 302 LKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPP 361
Query: 298 SPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVKPWMLQVSPK--EALAVNSIL 355
+PD D L E+G +LA+LA ++++ F +RG A+ L D+ ML++ P EA+AVNS+
Sbjct: 362 APDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVF 421
Query: 356 QLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMF 415
+LHKLLG R +E VLG ++ + P I TVVEQESNHN P FLDRFT +L+YYST+F
Sbjct: 422 ELHKLLG----RPGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLF 477
Query: 416 DSLEACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGS 475
DSLE P +K ++E+YL ++ICN+V CEG RVERHE L++W NR +G P HLGS
Sbjct: 478 DSLEGVPNSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGS 537
Query: 476 NAFRQASMLLTLF-SAEGYSVEETEGCLTLGWHSRPLIAASAW 517
NAF+QASMLL++F S +GY VEE+ GCL LGWH+RPLI SAW
Sbjct: 538 NAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAW 580
Score = 200 (75.5 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 41/65 (63%), Positives = 52/65 (80%)
Query: 31 DGLLAGAGYKVRSSELRQVAQRLERLETVMVNSPAD-ISQLASDTVHYNPSDLASWVDSL 89
D LLA GYKVRSSE+ +VA +LE+LET+M N D +S LA+DTVHYNPS+L SW+D++
Sbjct: 44 DELLAVLGYKVRSSEMAEVALKLEQLETMMSNVQEDGLSHLATDTVHYNPSELYSWLDNM 103
Query: 90 LSEFN 94
LSE N
Sbjct: 104 LSELN 108
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 1091 (389.1 bits), Expect = 1.8e-110, P = 1.8e-110
Identities = 237/510 (46%), Positives = 318/510 (62%)
Query: 30 IDGLLAGAGYKVRSSELRQVAQRLERLETVMVN-SPADISQLASDTVHYNPSDLASWVDS 88
+D LLA GYKVRSSE+ VAQ+LE+LE +M N D+SQLA++TVHYNP++L +W+DS
Sbjct: 27 MDELLAVLGYKVRSSEMADVAQKLEQLEVMMSNVQEDDLSQLATETVHYNPAELYTWLDS 86
Query: 89 LLSEFNQXXXXXXXXXXXX--------XXIIAGPSVNHTAVGN-YLTD------NFXXXX 133
+L++ N I + S N G+ Y T+ N
Sbjct: 87 MLTDLNPPSSNAEYDLKAIPGDAILNQFAIDSASSSNQGGGGDTYTTNKRLKCSNGVVET 146
Query: 134 XXXXXXXXMMIVTAMEEDSGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSC 193
+V +++G+RLVH L+ CAE+VQ+ + VA +L++ + G L V+
Sbjct: 147 TTATAESTRHVVLVDSQENGVRLVHALLACAEAVQKENLTVAEALVKQI-GFLA-VSQIG 204
Query: 194 GIGKVAGCFIDALSFRIMGVGGS---ICGSVSENEILYHHFYEACPYLKFAHFTANQAIL 250
+ KVA F +AL+ RI + S I S+S+ L HFYE CPYLKFAHFTANQAIL
Sbjct: 205 AMRKVATYFAEALARRIYRLSPSQSPIDHSLSDT--LQMHFYETCPYLKFAHFTANQAIL 262
Query: 251 EAFDGHDCVHVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGL 310
EAF G VHV+DF++ GLQWPAL+Q +PD D L E+G
Sbjct: 263 EAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGC 322
Query: 311 RLAELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKE--ALAVNSILQLHKLLGSDPARN 368
+LA LA ++++ F +RG A+ L D+ ML++ P E ++AVNS+ +LHKLLG R
Sbjct: 323 KLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLG----RP 378
Query: 369 SPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKA 428
++ VLG + + P+I TVVEQESNHN P FLDRFT +L+YYST+FDSLE P +K
Sbjct: 379 GAIDKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQDKV 438
Query: 429 LAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLF 488
++E+YL ++ICNVV C+G RVERHE L++WRNR AGF H+GSNAF+QASMLL LF
Sbjct: 439 MSEVYLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALF 498
Query: 489 SA-EGYSVEETEGCLTLGWHSRPLIAASAW 517
+ EGY VEE++GCL LGWH+RPLIA SAW
Sbjct: 499 NGGEGYRVEESDGCLMLGWHTRPLIATSAW 528
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 837 (299.7 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 174/384 (45%), Positives = 251/384 (65%)
Query: 144 IVTAMEEDSGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFI 203
+V +++G+RLVH L+ CAE++ + + +A +L++ + G L + + +GKVA F
Sbjct: 168 VVLVDSQETGVRLVHALVACAEAIHQENLNLADALVKRV-GTLAG-SQAGAMGKVATYFA 225
Query: 204 DALSFRIMG---VGGSICGSVSEN--EILYHHFYEACPYLKFAHFTANQAILEAFDGHDC 258
AL+ RI +C +V+ + E+L HFYE+CPYLKFAHFTANQAILEA
Sbjct: 226 QALARRIYRDYTAETDVCAAVNPSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTTARR 285
Query: 259 VHVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGLRLAELARS 318
VHV+D L G+QWPAL+Q + DSL+++G +LA+ A++
Sbjct: 286 VHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQN 345
Query: 319 VNIRFTFRGVAASRLEDVKPWMLQVSPK-EALAVNSILQLHKLLGSDPARNSPMEMVLGW 377
+ + F F+G+AA L D++P M + P+ E L VNS+ +LH+LL AR+ +E +L
Sbjct: 346 MGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLL----ARSGSIEKLLNT 401
Query: 378 IRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLE---ACPLQPEKALAEIYL 434
++ + P I+TVVEQE+NHN FLDRF AL+YYS++FDSLE + P Q ++ ++E+YL
Sbjct: 402 VKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQ-DRVMSEVYL 460
Query: 435 QREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSA-EGY 493
R+I NVV EGS RVERHE A+WR R+ AGF P+HLGS+AF+QASMLL+L++ +GY
Sbjct: 461 GRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGY 520
Query: 494 SVEETEGCLTLGWHSRPLIAASAW 517
VEE +GCL +GW +RPLI SAW
Sbjct: 521 RVEENDGCLMIGWQTRPLITTSAW 544
Score = 188 (71.2 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 38/64 (59%), Positives = 50/64 (78%)
Query: 31 DGLLAGAGYKVRSSELRQVAQRLERLETVMVNSPADISQLASDTVHYNPSDLASWVDSLL 90
D LLA GYKVRSSE+ +VAQ+LE+LE V+ N S + +D+VHYNPSDL++WV+S+L
Sbjct: 44 DELLAVLGYKVRSSEMAEVAQKLEQLEMVLSNDDVG-STVLNDSVHYNPSDLSNWVESML 102
Query: 91 SEFN 94
SE N
Sbjct: 103 SELN 106
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 215/497 (43%), Positives = 307/497 (61%)
Query: 24 KQPVAEIDGLLAGAGYKVRSSELRQVAQRLERLETVMVNSPADISQLASDTVHYNPSDLA 83
K+ A +D LL GYKVRSS++ VA +LE+LE V+ + IS L+ +TVHYNPSDL+
Sbjct: 25 KEEAAGVDELLVVLGYKVRSSDMADVAHKLEQLEMVLGDG---ISNLSDETVHYNPSDLS 81
Query: 84 SWVDSLLSEFNQXXXXXXXXXXXXXXIIAGPSVNHTAVGNYLTDNFXXXXXXXXXXXXMM 143
WV+S+LS+ + I G +V ++T
Sbjct: 82 GWVESMLSDLDPTRIQEKPDSEYDLRAIPGSAVYPR--DEHVTRRSKRTRIESELSSTRS 139
Query: 144 IVTAMEEDSGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFI 203
+V +++G+RLVH L+ CAE+VQ+ + +A +L++ + GLL + + + KVA F
Sbjct: 140 VVVLDSQETGVRLVHALLACAEAVQQNNLKLADALVKHV-GLLAS-SQAGAMRKVATYFA 197
Query: 204 DALSFRIMGVGGSICGSVSE-NEILYHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVV 262
+ L+ RI + ++S ++ L HFYE+CPYLKFAHFTANQAILE F + VHV+
Sbjct: 198 EGLARRIYRIYPRDDVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVI 257
Query: 263 DFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGLRLAELARSVNIR 322
D L HGLQWPALIQ D ++E+G +L +LA ++ +
Sbjct: 258 DLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTD----IQEVGWKLGQLASTIGVN 313
Query: 323 FTFRGVAASRLEDVKPWMLQVSPK-EALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNL 381
F F+ +A + L D+KP ML + P E++AVNS+ +LH+LL A ++ L I+++
Sbjct: 314 FEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLL----AHPGSIDKFLSTIKSI 369
Query: 382 NPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQREICNV 441
P IMTVVEQE+NHN FLDRFT +L+YYS++FDSLE P Q ++ ++E++L R+I N+
Sbjct: 370 RPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQ-DRVMSELFLGRQILNL 428
Query: 442 VCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFS-AEGYSVEETEG 500
V CEG RVERHE L +WRNR GF+P+ +GSNA++QASMLL L++ A+GY+VEE EG
Sbjct: 429 VACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEG 488
Query: 501 CLTLGWHSRPLIAASAW 517
CL LGW +RPLIA SAW
Sbjct: 489 CLLLGWQTRPLIATSAW 505
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 795 (284.9 bits), Expect = 2.6e-96, Sum P(2) = 2.6e-96
Identities = 168/373 (45%), Positives = 242/373 (64%)
Query: 150 EDSGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDALSFR 209
E++G+RLV L+ CAE+VQ +++A +L++ + GLL + + +GKVA F +AL+ R
Sbjct: 151 EETGVRLVQALVACAEAVQLENLSLADALVKRV-GLLA-ASQAGAMGKVATYFAEALARR 208
Query: 210 IMGVGGSICG-SVSENEILYHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNLMH 268
I + S S EIL +FY++CPYLKFAHFTANQAILEA VHV+D L
Sbjct: 209 IYRIHPSAAAIDPSFEEILQMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQ 268
Query: 269 GLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGLRLAELARSVNIRFTFRGV 328
G+QWPAL+Q +P R+ ++E+G +LA+LA+++ + F F G+
Sbjct: 269 GMQWPALMQALALRPGGPPSFRLTGVG--NPSNREGIQELGWKLAQLAQAIGVEFKFNGL 326
Query: 329 AASRLEDVKPWMLQV-SPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMT 387
RL D++P M + + E L VNS+ +LH +L S P +E +L ++ + P ++T
Sbjct: 327 TTERLSDLEPDMFETRTESETLVVNSVFELHPVL-SQPGS---IEKLLATVKAVKPGLVT 382
Query: 388 VVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQP--EKALAEIYLQREICNVVCCE 445
VVEQE+NHN FLDRF AL+YYS++FDSLE + P ++ ++E+YL R+I N+V E
Sbjct: 383 VVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVATE 442
Query: 446 GSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSA-EGYSVEETEGCLTL 504
GS R+ERHE LA+WR R+ AGF P++LGS+AF+QAS+LL L +GY VEE +G L L
Sbjct: 443 GSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLML 502
Query: 505 GWHSRPLIAASAW 517
W ++PLIAASAW
Sbjct: 503 AWQTKPLIAASAW 515
Score = 182 (69.1 bits), Expect = 2.6e-96, Sum P(2) = 2.6e-96
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 30 IDGLLAGAGYKVRSSELRQVAQRLERLETVMVNSPADISQLASDTVHYNPSDLASWVDSL 89
+D LA GYKVRSS++ VAQ+LE+LE V+ N A S +DTVHYNPSDL+ W S+
Sbjct: 33 MDEFLAVLGYKVRSSDMADVAQKLEQLEMVLSNDIASSSNAFNDTVHYNPSDLSGWAQSM 92
Query: 90 LSEFN 94
LS+ N
Sbjct: 93 LSDLN 97
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 523 (189.2 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 127/371 (34%), Positives = 195/371 (52%)
Query: 160 LMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDALSFRIMGVGGSI-- 217
L++CA+++ ++ +A S++E ++ +++ V+ I ++ ++ L ++ G SI
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVS-VSGE-PIQRLGAYLLEGLVAQLASSGSSIYK 180
Query: 218 ----CGSVSENEIL-YHHF-YEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNLMHGLQ 271
C + E+L Y H YE CPY KF + +AN AI EA + VH++DF + G Q
Sbjct: 181 ALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQ 240
Query: 272 WPALIQXXXXXXXXX-XXXXXXXXXXXSPDGRDS-LREIGLRLAELARSVNIRFTFRGVA 329
W LIQ S R L +G RLA+LA+ N+ F F V+
Sbjct: 241 WVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVS 300
Query: 330 ASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVV 389
S + +VKP L V P EALAVN LH + + + + +L +++L+PK++T+V
Sbjct: 301 VS-VSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLV 359
Query: 390 EQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIY---LQREICNVVCCEG 446
EQESN N F RF + YY+ MF+S++ + K + L R++ N++ CEG
Sbjct: 360 EQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEG 419
Query: 447 SARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGW 506
+ RVERHE L KWR+R AGF P L LL +S + Y +EE +G L LGW
Sbjct: 420 ADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYS-DKYRLEERDGALYLGW 478
Query: 507 HSRPLIAASAW 517
R L+A+ AW
Sbjct: 479 MHRDLVASCAW 489
Score = 38 (18.4 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 11/50 (22%), Positives = 23/50 (46%)
Query: 43 SSELRQVAQRLERLETVMVNSPADISQLASDTVHYNPS---DLASWVDSL 89
+ EL ++ +ETVM+ P + L T ++ + ++ W +L
Sbjct: 63 TDELNDFKHKIREIETVMMG-PDSLDLLVDCTDSFDSTASQEINGWRSTL 111
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 123/386 (31%), Positives = 195/386 (50%)
Query: 142 MMIVTAMEEDSGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGC 201
++IV A+ ++LV L+ CA++V + +A + +++G+++ I ++
Sbjct: 39 LLIVEAISRGD-LKLV--LVACAKAVSENNLLMARWCMGELRGMVSISGEP--IQRLGAY 93
Query: 202 FIDALSFRIMGVGGSICGSVSENEILYHHF-------YEACPYLKFAHFTANQAILEAFD 254
++ L R+ G SI S+ E + F +E CPY KF + +AN AI EA
Sbjct: 94 MLEGLVARLAASGSSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMK 153
Query: 255 GHDCVHVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGLRLAE 314
+ +H++DF + G QW ALIQ DG L + RL +
Sbjct: 154 DEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVG----DG-SVLVTVKKRLEK 208
Query: 315 LARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMV 374
LA+ ++ F F V+ E V+ L V EAL VN LH L + + + +
Sbjct: 209 LAKKFDVPFRFNAVSRPSCE-VEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRL 267
Query: 375 LGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIY- 433
L +++L+PK++T+VEQE N N FL RF L YY+ MF+S++ + K I
Sbjct: 268 LRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQ 327
Query: 434 --LQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAE 491
+ R++ N++ CEG+ R+ERHE L KW++R + AGF P L S LL +S
Sbjct: 328 HCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYS-N 386
Query: 492 GYSVEETEGCLTLGWHSRPLIAASAW 517
GY++EE +G L LGW R L+++ AW
Sbjct: 387 GYAIEERDGALYLGWMDRILVSSCAW 412
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 128/383 (33%), Positives = 193/383 (50%)
Query: 147 AMEEDSGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDAL 206
+ME S L +L CA++V+ ++ + LI ++ +++ V+ + ++ ++ L
Sbjct: 218 SMEMISRGDLKGVLYECAKAVENYDLEMTDWLISQLQQMVS-VSGE-PVQRLGAYMLEGL 275
Query: 207 SFRIMGVGGSI-----CGSVSENEIL-YHHF-YEACPYLKFAHFTANQAILEAFDGHDCV 259
R+ G SI C + E+L Y H YEACPY KF + +AN AI EA V
Sbjct: 276 VARLASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFV 335
Query: 260 HVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXX-XSPDGRDS-LREIGLRLAELAR 317
H++DF + G QW +LI+ S R L +G RL +LA
Sbjct: 336 HIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAE 395
Query: 318 SVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGW 377
+ F F G A E V+ L V EALAVN L LH + + + +L
Sbjct: 396 MCGVPFEFHGAALCCTE-VEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRL 454
Query: 378 IRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIY---L 434
+++L+P ++T+VEQE+N N FL RF + +Y +F+S++ + K + L
Sbjct: 455 VKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCL 514
Query: 435 QREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYS 494
RE+ N++ CEG R ERHEPL KWR+R AGF+P L S LL +S E Y+
Sbjct: 515 AREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYS-EKYT 573
Query: 495 VEETEGCLTLGWHSRPLIAASAW 517
+EE +G L LGW ++PLI + AW
Sbjct: 574 LEERDGALYLGWKNQPLITSCAW 596
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 445 (161.7 bits), Expect = 7.5e-44, Sum P(2) = 7.5e-44
Identities = 121/388 (31%), Positives = 182/388 (46%)
Query: 156 LVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDALSFRIMGVGG 215
LV++L C ++++ +A I G L + ++ +I+AL+ R+ +
Sbjct: 274 LVNLLTGCLDAIRSRNIAAINHFIA-RTGDLASPRGRTPMTRLIAYYIEALALRVARMWP 332
Query: 216 SICGSVSENEI----------LYHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFN 265
I E + P KF HFTAN+ +L AF+G + VH++DF+
Sbjct: 333 HIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFD 392
Query: 266 LMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGLRLAELARSVNIRFTF 325
+ GLQWP+ Q + + L E G RL A ++N++F F
Sbjct: 393 IKQGLQWPSFFQSLASRINPPHHVRITGIG----ESKLELNETGDRLHGFAEAMNLQFEF 448
Query: 326 RGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKI 385
V RLEDV+ WML V E++AVN ++Q+HK L + + LG IR+ NP
Sbjct: 449 HPVV-DRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYD--GTGAAIRDFLGLIRSTNPIA 505
Query: 386 MTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLE---ACPLQPEKALAEIYLQREICNVV 442
+ + EQE+ HN + R +L YYS MFD++ A + E+ REI N+V
Sbjct: 506 LVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIV 565
Query: 443 CCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSA--EGY-SVEETE 499
CEGS R ERH WR L GFR L + Q+ MLL ++ + EG+ +VE ++
Sbjct: 566 ACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERSD 625
Query: 500 ----------GCLTLGWHSRPLIAASAW 517
G +TL W +PL SAW
Sbjct: 626 EDNGGEGGRGGGVTLRWSEQPLYTISAW 653
Score = 38 (18.4 bits), Expect = 7.5e-44, Sum P(2) = 7.5e-44
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 82 LASWVDSLLSE 92
L +WVDS+++E
Sbjct: 185 LPNWVDSVITE 195
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 117/372 (31%), Positives = 182/372 (48%)
Query: 159 MLMTCAESVQRGEMAVAGSLIEDMKGLLT-RVNPSCGIGKVAGCFIDALSFRIMGVGGSI 217
+L++CA ++ G++ A S++ +++ +++ + +PS ++A ++ L+ R+ G I
Sbjct: 225 ILISCARALSEGKLEEALSMVNELRQIVSIQGDPS---QRIAAYMVEGLAARMAASGKFI 281
Query: 218 -----CGSVSENEIL--YHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNLMHGL 270
C +E L +E CP KF AN AILEA G + VH++DF++ G
Sbjct: 282 YRALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGN 341
Query: 271 QWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRD--SLREIGLRLAELARSVNIRFTFRGV 328
Q+ LI+ R LR IGLRL +LA + F F+ +
Sbjct: 342 QYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAM 401
Query: 329 AASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTV 388
S+ V P L P E L VN QLH + + + +L +++LNPK++TV
Sbjct: 402 P-SKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTV 460
Query: 389 VEQESNHNQPEFLDRFTTALYYYSTMFDSLE-ACPLQPEKAL-AEIY-LQREICNVVCCE 445
VEQ+ N N F RF A YYS +F+SL+ P + ++ + E L R+I N+V CE
Sbjct: 461 VEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACE 520
Query: 446 GSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLG 505
G R+ER+E KWR R+ AGF P + + L+ Y ++E G L
Sbjct: 521 GEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFC 580
Query: 506 WHSRPLIAASAW 517
W + LI ASAW
Sbjct: 581 WEEKSLIVASAW 592
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 131/393 (33%), Positives = 192/393 (48%)
Query: 148 MEED--SGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDA 205
+E D + I+L+ +L+ CAE V + A +L+ ++ + + S +V F A
Sbjct: 30 LENDGAAAIKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPE--RVVAYFAQA 87
Query: 206 LSFRIMG--VGGSICGSVSENEILY---HHFYEAC-------PYLKFAHFTANQAILEAF 253
L R++ + G+ C +SE + + A P +KF+HFTANQAI +A
Sbjct: 88 LQTRVISSYLSGA-CSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQAL 146
Query: 254 DGHDCVHVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGLRLA 313
DG D VH++D ++M GLQWPAL S D L G RLA
Sbjct: 147 DGEDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSS----DLLASTGRRLA 202
Query: 314 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEM 373
+ A S+N+ F F + + P L EA+ V+ +Q H+L D N+ +E
Sbjct: 203 DFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHW-MQ-HRLY--DVTGNN-LE- 256
Query: 374 VLGWIRNLNPKIMTVVEQESNHNQP-EFLDRFTTALYYYSTMFDSLEACPLQPEKA---- 428
L +R L P ++TVVEQE +++ FL RF AL+YYS +FD+L L E
Sbjct: 257 TLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDAL-GDGLGEESGERFT 315
Query: 429 LAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLF 488
+ +I L EI N+V G R +R KW+ L+ GFRP+ L N QA +LL +
Sbjct: 316 VEQIVLGTEIRNIVA-HGGGRRKR----MKWKEELSRVGFRPVSLRGNPATQAGLLLGML 370
Query: 489 SAEGYSVEETEGCLTLGWHSRPLIAASAWHAVP 521
GY++ E G L LGW L+ ASAW + P
Sbjct: 371 PWNGYTLVEENGTLRLGWKDLSLLTASAWKSQP 403
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 265 (98.3 bits), Expect = 1.6e-41, Sum P(2) = 1.6e-41
Identities = 58/146 (39%), Positives = 79/146 (54%)
Query: 375 LGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEA-CPL--QPEKALAE 431
L I L+PK+M V EQ+S+HN ++R +LY Y+ +FD LE P Q + +
Sbjct: 333 LNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEK 392
Query: 432 IYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAE 491
+ EI N++ CEG R ERHE L KW R+ AGF + L A QA LL +
Sbjct: 393 MLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFD 452
Query: 492 GYSVEETEGCLTLGWHSRPLIAASAW 517
GY ++E GC + W RPL + SAW
Sbjct: 453 GYRIKEESGCAVICWQDRPLYSVSAW 478
Score = 241 (89.9 bits), Expect = 1.6e-41, Sum P(2) = 1.6e-41
Identities = 71/225 (31%), Positives = 112/225 (49%)
Query: 150 EDSGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDALSFR 209
E+ G+ L+H+L+TCA V G + A + +E + L + + + ++A F +AL+ R
Sbjct: 48 EERGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDT--MQRIAAYFTEALANR 105
Query: 210 IM----GVGGSI------CGSVSENEILYHHFYEACPYLKFAHFTANQAILEAFDGHDCV 259
I+ G+ ++ +VSE + F+E P LK ++ N+AILEA +G V
Sbjct: 106 ILKSWPGLYKALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMV 165
Query: 260 HVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGLRLAELARSV 319
HV+D + QW AL+Q ++ L ++ RL E A +
Sbjct: 166 HVIDLDASEPAQWLALLQAFNSRPEGPPHLRITGVHHQ----KEVLEQMAHRLIEEAEKL 221
Query: 320 NIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSD 364
+I F F V SRL+ + L+V EALAV+S+LQLH L SD
Sbjct: 222 DIPFQFNPVV-SRLDCLNVEQLRVKTGEALAVSSVLQLHTFLASD 265
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 439 (159.6 bits), Expect = 3.8e-41, P = 3.8e-41
Identities = 120/383 (31%), Positives = 195/383 (50%)
Query: 149 EEDSGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDALSF 208
+++ G+ L+ +L+ CAE+V + A L+ ++ L T S +VA F +A+S
Sbjct: 283 QDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQ--RVAAYFSEAMSA 340
Query: 209 RIM----GVGGSICGS-VSENEIL-----YHHFYEACPYLKFAHFTANQAILEAFDGHDC 258
R++ G+ ++ + + L + F P +KF+HFTANQAI EAF+ D
Sbjct: 341 RLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDS 400
Query: 259 VHVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGLRLAELARS 318
VH++D ++M GLQWP L ++L+ G RL++ A
Sbjct: 401 VHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSM----EALQATGKRLSDFADK 456
Query: 319 VNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQ-LHKLLGSDPARNSPMEMVLGW 377
+ + F F +A ++ ++ L V +EA+AV+ + L+ + GSD L
Sbjct: 457 LGLPFEFCPLA-EKVGNLDTERLNVRKREAVAVHWLQHSLYDVTGSDAH-------TLWL 508
Query: 378 IRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEAC--PLQPEKALAEIYL- 434
++ L PK++TVVEQ+ +H FL RF A++YYS +FDSL A E+ + E L
Sbjct: 509 LQRLAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLL 567
Query: 435 QREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYS 494
+EI NV+ G +R WR ++ GF+ + L NA QA++LL +F ++GY+
Sbjct: 568 SKEIRNVLAVGGPSR-SGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYT 626
Query: 495 VEETEGCLTLGWHSRPLIAASAW 517
+ + G L LGW L+ ASAW
Sbjct: 627 LVDDNGTLKLGWKDLSLLTASAW 649
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 103/312 (33%), Positives = 161/312 (51%)
Query: 222 SENEILYHHFY-EACPYLKFAHFTANQAILEAFDGHD--CVHVVDFNLMHGLQWPALIQX 278
S+ E Y+ + + P+++F H TANQAIL+A + +D +H++D ++ GLQWP L+Q
Sbjct: 139 SDFESCYYLWLNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQA 198
Query: 279 XXXXXXXXXXXXXXXXXXXSPDGRD--SLREIGLRLAELARSVNIRFTFRGVAASRLEDV 336
GRD L G RL A S+ ++F F + ED+
Sbjct: 199 LAERSSNPSSPPPSLRITGC--GRDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVE-EDL 255
Query: 337 KPWMLQVS-------PKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVV 389
+LQ+ E +AVN + LHK+ D + L I++LN +I+T+
Sbjct: 256 AGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDD---GDMIGHFLSAIKSLNSRIVTMA 312
Query: 390 EQESNHNQPEFLDRFTTALYYYSTMFDSLEAC--PLQPEK-ALAEIYLQREICNVVCCEG 446
E+E+NH FL+RF+ A+ +Y +FDSLEA P E+ L + + +EI +VV E
Sbjct: 313 EREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEE 372
Query: 447 SARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTL-FSAEGYSVEETEGCLTLG 505
+ R +RH W + GF + +GS A QA +LL L + +EGY+++ L LG
Sbjct: 373 TERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLG 432
Query: 506 WHSRPLIAASAW 517
W +RPL + S+W
Sbjct: 433 WQNRPLFSVSSW 444
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 396 (144.5 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 110/335 (32%), Positives = 171/335 (51%)
Query: 197 KVAGCFIDALSFRIMGVGGSICGSVSENEIL---YHHFYEACPYLKFAHFTANQAILEAF 253
+VA F +ALS R+ + S S E L Y +ACPY KFAH TANQAILEA
Sbjct: 255 RVAFYFTEALSNRLSPNSPATSSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEAT 314
Query: 254 DGHDCVHVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRD---SLREIGL 310
+ + +H+VDF ++ G+QWPAL+Q G SL G
Sbjct: 315 EKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGN 374
Query: 311 RLAELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSP 370
RL + A+ +++ F F + + + +V P E LAVN +LQL+KLL P +
Sbjct: 375 RLRDFAKVLDLNFDFIPILTP-IHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETP---TI 430
Query: 371 MEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALA 430
++ L ++LNP+++T+ E E + N+ F +R AL +YS +F+SLE P +
Sbjct: 431 VDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLE--PNLGRDSEE 488
Query: 431 EIYLQRE-----ICNVVCCEGSA-RVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASML 484
+ ++RE I ++ E + ER E +WR + AGF + L + A QA +L
Sbjct: 489 RVRVERELFGRRISGLIGPEKTGIHRERMEEKEQWRVLMENAGFESVKLSNYAVSQAKIL 548
Query: 485 LTLFSAEG-YSVEETE-GCLTLGWHSRPLIAASAW 517
L ++ YS+ E++ G ++L W+ PL+ S+W
Sbjct: 549 LWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSW 583
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 395 (144.1 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 104/373 (27%), Positives = 175/373 (46%)
Query: 159 MLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDALSFRIMGVGGSIC 218
+L+ CA++V + A ++ ++ + + G ++A F ++L R+ G G I
Sbjct: 396 LLVLCAQAVSVDDRRTANEMLRQIREHSSPLGN--GSERLAHYFANSLEARLAGTGTQIY 453
Query: 219 GSVSEN-----EIL--YHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNLMHGLQ 271
++S ++L Y + CP+ K A AN +++ + +H++DF + +G Q
Sbjct: 454 TALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQ 513
Query: 272 WPALIQXXXXXXXXXXXXXXXXXXXXSPDG---RDSLREIGLRLAELARSVNIRFTFRGV 328
WPALI G + ++E G RLA + N+ F + +
Sbjct: 514 WPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAI 573
Query: 329 AASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTV 388
A + E ++ L++ E + VNS+ + LL NSP + VL IR +NP +
Sbjct: 574 A-QKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFIP 632
Query: 389 VEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQ----REICNVVCC 444
N+N P F+ RF AL++YS +FD ++ L E + +Y + REI NVV C
Sbjct: 633 AILSGNYNAPFFVTRFREALFHYSAVFDMCDS-KLAREDEMRLMYEKEFYGREIVNVVAC 691
Query: 445 EGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTL 504
EG+ RVER E +W+ RL AGFR L L + + + + + V++ L
Sbjct: 692 EGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQ 751
Query: 505 GWHSRPLIAASAW 517
GW R + A+S W
Sbjct: 752 GWKGRIVYASSLW 764
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 364 (133.2 bits), Expect = 2.8e-33, P = 2.8e-33
Identities = 109/337 (32%), Positives = 166/337 (49%)
Query: 195 IGKVAGCFIDALSFRIMGVGGSICGSVSENEIL-YHHFYEACPYLKFAHFTANQAILEAF 253
I +V F +ALS + S S E+ IL Y +ACPY KFAH TANQAILEA
Sbjct: 209 IQRVGYYFAEALSHKETESPSSSSSSSLEDFILSYKTLNDACPYSKFAHLTANQAILEAT 268
Query: 254 DGHDCVHVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRD---SLREIGL 310
+ + +H+VDF + G+QW AL+Q G SL G
Sbjct: 269 NQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGN 328
Query: 311 RLAELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSP 370
RL + A +++ F F V ++ + +V P E L VN +L+L+KLL D +
Sbjct: 329 RLRDFAAILDLNFEFYPVLTP-IQLLNGSSFRVDPDEVLVVNFMLELYKLL--DETATT- 384
Query: 371 MEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKA-- 428
+ L R+LNP+I+T+ E E + N+ EF +R +L +YS +F+SLE + K
Sbjct: 385 VGTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERL 444
Query: 429 -LAEIYLQREICNVVCCEGS-----ARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQAS 482
+ + R I ++V + R E +WR + AGF P+ + A QA
Sbjct: 445 RVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAK 504
Query: 483 MLLTLFSAEG-YSVEETE-GCLTLGWHSRPLIAASAW 517
+LL ++ YS+ E+E G ++L W++ PL+ S+W
Sbjct: 505 LLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSW 541
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 369 (135.0 bits), Expect = 3.4e-33, P = 3.4e-33
Identities = 106/379 (27%), Positives = 174/379 (45%)
Query: 159 MLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDALSFRIMGVGGSIC 218
+L CA+SV G+ A L+ ++ + V + ++A F +AL R+ G G++
Sbjct: 318 LLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQ--RLAHFFANALEARLEGSTGTMI 375
Query: 219 ----GSVSEN-----EIL--YHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNLM 267
S+S +IL Y F A P++ +F +N+ IL+A +H+VDF ++
Sbjct: 376 QSYYDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGIL 435
Query: 268 HGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGR--DSLREIGLRLAELARSVNIRFTF 325
+G QWP IQ R + +++ G RL E + + F +
Sbjct: 436 YGFQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEY 495
Query: 326 RGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNS-PMEMVLGWIRNLNPK 384
+A+ E +K ++ P E LAVN++L+ L P P + L IR++NP
Sbjct: 496 NAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPN 555
Query: 385 IMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQ--PEKALAE-IYLQREICNV 441
+ + N P F RF AL++YS +FD A + PE+ E + RE+ NV
Sbjct: 556 VFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNV 615
Query: 442 VCCEGSARVERHEPLAKWRNRLAGAGFR--PLHLGS-NAFRQASMLLTLFSAEGYSVEET 498
+ CEG RVER E +W+ R+ AGF+ P+ FR+ M + + + ++E
Sbjct: 616 IACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFRE-KMKKWGYHKD-FVLDED 673
Query: 499 EGCLTLGWHSRPLIAASAW 517
GW R L ++S W
Sbjct: 674 SNWFLQGWKGRILFSSSCW 692
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 364 (133.2 bits), Expect = 5.3e-33, P = 5.3e-33
Identities = 104/380 (27%), Positives = 170/380 (44%)
Query: 149 EEDSGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDALSF 208
+ D + + ++LM CA++V + A +++++ +R + ++ F +AL
Sbjct: 202 KSDQPVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQ--RLGYHFAEALEA 259
Query: 209 RIMGVGGSICGSVSEN----EIL--YHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVV 262
RI G + + S +IL Y F +ACP L +FTAN+ I E +H++
Sbjct: 260 RITGTMTTPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKATTLHII 319
Query: 263 DFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLR--EIGLRLAELARSVN 320
DF +++G QWP LIQ R S R E G RL N
Sbjct: 320 DFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFN 379
Query: 321 IRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRN 380
+ F + +A + E++ L ++ E VN IL+L + NSP + L R+
Sbjct: 380 VPFEYSFIAKN-WENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRD 438
Query: 381 LNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPE--KALAEIYLQ-RE 437
+NP + E +N P FL RF AL++ S++FD E + + + L E L R+
Sbjct: 439 INPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRD 498
Query: 438 ICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEE 497
+V+ CEGS R R E +W+ R+ AGFRP L + ++ + + ++
Sbjct: 499 AMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDN 558
Query: 498 TEGCLTLGWHSRPLIAASAW 517
+ GW R L A S W
Sbjct: 559 DNHWMFQGWKGRVLYAVSCW 578
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 351 (128.6 bits), Expect = 3.4e-31, P = 3.4e-31
Identities = 101/377 (26%), Positives = 169/377 (44%)
Query: 154 IRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDALSFRIMGV 213
+ L +L+ CA++V + AG L++ ++ T G ++A CF + L R+ G
Sbjct: 342 VDLRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGD--GNQRLAHCFANGLEARLAGT 399
Query: 214 GGSIC-GSVSENE----ILYHH--FYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNL 266
G I G VS+ +L H F CP+ K ++F N+ I + VHV+DF +
Sbjct: 400 GSQIYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGI 459
Query: 267 MHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLR--EIGLRLAELARSVNIRFT 324
++G QWP LI P R + R E G RLA A+ + F
Sbjct: 460 LYGFQWPTLIHRFSMYGSPKVRITGIEFP--QPGFRPAQRVEETGQRLAAYAKLFGVPFE 517
Query: 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPK 384
++ +A + + ++ L + E VN + + L S + VL I +NP
Sbjct: 518 YKAIA-KKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPD 576
Query: 385 IMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEAC-PLQPEKAL---AEIYLQREICN 440
+ +N P F+ RF AL+++S++FD LE P + E+ + E++ RE N
Sbjct: 577 LFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVF-GREALN 635
Query: 441 VVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEG 500
V+ CEG RVER E +W R +G + + + + + F + + +++
Sbjct: 636 VIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNR 695
Query: 501 CLTLGWHSRPLIAASAW 517
L GW R ++A S W
Sbjct: 696 WLLQGWKGRTVMALSVW 712
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 338 (124.0 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 103/393 (26%), Positives = 172/393 (43%)
Query: 154 IRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDALSFRIMG- 212
+ L +L CA++V + A +++++ + N G ++A F +AL RI G
Sbjct: 222 VDLRSLLTQCAQAVASFDQRRATDKLKEIRAHSSS-NGD-GTQRLAFYFAEALEARITGN 279
Query: 213 ----VGGSICGSVSEN-EIL--YHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFN 265
V S + +IL Y F CP +F AN++I E +H+VDF
Sbjct: 280 ISPPVSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFG 339
Query: 266 LMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGR--DSLREIGLRLAELARSVNIRF 323
+++G QWP L++ R D + E G RL N+ F
Sbjct: 340 VLYGFQWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPF 399
Query: 324 TFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNP 383
F +A + E + L ++P E VN I +L + +SP + VL R++NP
Sbjct: 400 EFNFIA-KKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINP 458
Query: 384 KIMTVVEQESNHNQPEFLDRFTTALYYYSTMFD----SLEACPLQPEKALAEI-YLQREI 438
+ E +N P F+ RF AL++YS++FD ++ A ++L E L R+
Sbjct: 459 DLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDA 518
Query: 439 CNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEET 498
+V+ CEG+ R R E +WR R+ AGF+P + ++A ++ + ++
Sbjct: 519 MSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSD 578
Query: 499 EGCLTLGWHSRPLIAASAWHAVPDVMMSHQNSN 531
+ GW R + A S W P ++ N N
Sbjct: 579 NNWMLQGWKGRVIYAFSCWK--PAEKFTNNNLN 609
Score = 42 (19.8 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 143 MIVTAMEEDSGIRLVHMLMTCAESVQRGE 171
+ V+ MEE ++L H+L+ C + + E
Sbjct: 163 IFVSEMEE-LAVKLEHVLLVCKTNQEEEE 190
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 319 (117.4 bits), Expect = 6.6e-27, P = 6.6e-27
Identities = 105/389 (26%), Positives = 183/389 (47%)
Query: 149 EEDSGIRLVHMLMTCAESVQRGEMA--VAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDAL 206
+E G+RLVH+L+ A++ + + ++ +K L++ + + + ++A F + L
Sbjct: 97 DESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSPGDRT-NMERLAAHFTNGL 155
Query: 207 SFRIMGVGGSICGSVSENEIL--------YHHFYEACPYLKFAHFTANQAILEAFDGHDC 258
S +++ +C +++ + PY+ F + TA QAILEA
Sbjct: 156 S-KLLERDSVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYERR 214
Query: 259 VHVVDFNLMHGLQWPALIQXXXXXXXX-XXXXXXXXXXXXSPDGRDSL---REIGLRLAE 314
+H+VD+++ G+QW +L+Q + +G+ S+ +E G RL
Sbjct: 215 IHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTA 274
Query: 315 LARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMV 374
A S+ F+++ L++ EA+ +N +L L + P S +
Sbjct: 275 FADSIGQPFSYQHCKLDT-NAFSTSSLKLVRGEAVVINCMLHLPRFSHQTP---SSVISF 330
Query: 375 LGWIRNLNPKIMTVVEQESN--HNQPEFLDRFTTALYYYSTMFDSLEA--CPLQPEKALA 430
L + LNPK++T+V +E NQ FL RF L+ +S +FDSLEA P +
Sbjct: 331 LSEAKTLNPKLVTLVHEEVGLMGNQG-FLYRFMDLLHQFSAIFDSLEAGLSIANPARGFV 389
Query: 431 E-IYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFS 489
E +++ + N + +A E A W L GF+PL + QA +LL+LF+
Sbjct: 390 ERVFIGPWVANWLT-RITANDAEVESFASWPQWLETNGFKPLEVSFTNRCQAKLLLSLFN 448
Query: 490 AEGYSVEET-EGCLTLGWHSRPLIAASAW 517
+G+ VEE + L LGW SR L++AS W
Sbjct: 449 -DGFRVEELGQNGLVLGWKSRRLVSASFW 476
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 322 (118.4 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 98/339 (28%), Positives = 154/339 (45%)
Query: 197 KVAGCFIDALSFRIMGVGGSICGSVSENEILYHHFYEACPYLKFAHFTANQAILEAFDGH 256
K+ + AL RI + G E+ I YE P K AN AIL+A D +
Sbjct: 304 KLVDFMVAALRSRIASPVTELYGK--EHLISTQLLYELSPCFKLGFEAANLAILDAADNN 361
Query: 257 D----CVHVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSP----------D-- 300
D HV+DF++ G Q+ L++ + D
Sbjct: 362 DGGMMIPHVIDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDG 421
Query: 301 GRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKL 360
G + L+ +G L++L + I +F V + RL D+ L P E LAVN +L+++
Sbjct: 422 GEERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRV 481
Query: 361 LGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEA 420
+P + +L ++ L P+++T+VEQE N N FL R + + Y + +S+E+
Sbjct: 482 PDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVES 541
Query: 421 C-P-LQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAF 478
P ++A E + R++ N V CEG R+ER E KWR R++ AGF + L S
Sbjct: 542 TVPSTNSDRAKVEEGIGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPL-SEKI 600
Query: 479 RQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAW 517
++ G++V+E G + GW R L ASAW
Sbjct: 601 AESMKSRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAW 639
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 297 (109.6 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 87/305 (28%), Positives = 134/305 (43%)
Query: 231 FYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQXXXXXXXXXXXXX 290
F E P+ F H AN AILEA DG +H+VD + QWP L++
Sbjct: 228 FQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLR 287
Query: 291 XXXXXXXSPDGRDS------LREIGLRLAELARSVNIRFTFRGVA-ASRLEDVKPWMLQV 343
+ D ++EIG R+ + AR + + F F + L + L V
Sbjct: 288 LTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDV 347
Query: 344 SPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESN---HNQ--- 397
P E LA+N + +H + +R SP + V+ R L P+I+TVVE+E++ +
Sbjct: 348 KPDEVLAINCVGAMHGIA----SRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGF 403
Query: 398 -PEFLDRFTTALYYYSTMFDSLE-ACP-LQPEKALAEIYLQREICNVVCCEGSARVERHE 454
EFL F L ++ F+S E + P E+ + E R I ++V CE S ER E
Sbjct: 404 DDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRE 463
Query: 455 PLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGC--LTLGWHSRPLI 512
KW R+ +GF + LL + +S+ + + L W +P++
Sbjct: 464 TARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVV 523
Query: 513 AASAW 517
ASAW
Sbjct: 524 WASAW 528
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 278 (102.9 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 95/347 (27%), Positives = 157/347 (45%)
Query: 183 KGLLTRVNP--SCGIGK----VAGCFIDALSFRIMGVGGSICG-SVSENEILYHHFYEAC 235
+G+L R+N S +GK A F +AL+ + V ++ S+ Y F E
Sbjct: 224 QGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQTLNPYSLIFKIAAYKSFSEIS 283
Query: 236 PYLKFAHFTANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXX 295
P L+FA+FT+NQA+LE+F G +H++DF++ +G QW +L+Q
Sbjct: 284 PVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWASLMQELVLRDNAAPLSLKITVF 343
Query: 296 XXSPDGRDSLREIGL---RLAELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVN 352
SP D L E+G L A +NI + ++ L + W S KEA+AVN
Sbjct: 344 A-SPANHDQL-ELGFTQDNLKHFASEINISLDIQVLSLDLLGSIS-WP-NSSEKEAVAVN 399
Query: 353 SILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYS 412
A S + +VL ++++L+P I+ ++ F + +L+ ++
Sbjct: 400 I----------SAASFSHLPLVLRFVKHLSPTIIVCSDRGCERTDLPFSQQLAHSLHSHT 449
Query: 413 TMFDSLEA--CPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRP 470
+F+SL+A L + + +Q EI +V + S +ER P+ W+ GF P
Sbjct: 450 ALFESLDAVNANLDAMQKIERFLIQPEIEKLVL-DRSRPIER--PMMTWQAMFLQMGFSP 506
Query: 471 LHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAW 517
+ + QA L+ G+ VE+ L L W L+ SAW
Sbjct: 507 VTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTELVGVSAW 553
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 275 (101.9 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 85/310 (27%), Positives = 141/310 (45%)
Query: 223 ENEIL----YHHFYEACPYLKFAHFTANQAILEAFD--GHDCVHVVDFNLMHGLQWPALI 276
EN IL Y F E P+L+F +FTANQ+ILE+ + G D +H++DF++ +G QW +L+
Sbjct: 341 ENLILRIAAYRSFSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLM 400
Query: 277 QXXXXXXXXXXXXXXXXXXXX--SPDGRDSLREIGLRLAE-----LARSVNIRFTFRGVA 329
Q +P E LR E A V I F ++
Sbjct: 401 QELASGVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLS 460
Query: 330 ASRLEDVKPWMLQV--SPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMT 387
L + W L + S KEA+AVN L + + + ++L +++ L+P I+
Sbjct: 461 VELLLNPAYWPLSLRSSEKEAIAVN--------LPVNSVASGYLPLILRFLKQLSPNIVV 512
Query: 388 VVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQREICNVVCCEGS 447
++ + N F + +L Y++++ +SL+A Q + ++ ++Q I ++ +
Sbjct: 513 CSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDANQNQDDSSIERFWVQPSIEKLLM-KRH 571
Query: 448 ARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWH 507
+ER P WR GF P L A QA LL G+ VE+ + L + W
Sbjct: 572 RWIERSPP---WRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQ 628
Query: 508 SRPLIAASAW 517
+ L+ SAW
Sbjct: 629 RKELVTVSAW 638
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 266 (98.7 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 92/384 (23%), Positives = 169/384 (44%)
Query: 159 MLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIG--KVAGCFIDALSFRIMGVGGS 216
+L+ CA ++ + A+ ++ +L + P G ++ F+ AL R + +
Sbjct: 30 LLLHCATAIDSNDAALTHQIL----WVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPT 85
Query: 217 ICGSVS---ENEILYHH-------FYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNL 266
+ ++S + + L+ F + P+ +F AN AIL A +G+ VH+VD +L
Sbjct: 86 LSSTISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSL 145
Query: 267 MHGLQWPALIQXXXXXXXXXXXXXXXXXXXXS----PDGRDSLREIGLRLAELARSVNIR 322
H +Q P LI S P S E+G +L A + NI
Sbjct: 146 THCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNIT 205
Query: 323 FTFRGVAASRLEDVKPWM--LQVSPK---EALAVNSILQLHKLLGSDPARNSPMEM---V 374
F V ++ + + L++ P EAL VN + L + + +P +S +
Sbjct: 206 MEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMML-RYIPEEPLTSSSSSLRTVF 264
Query: 375 LGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYL 434
L +R+LNP+I+T++E++ + ++R +A Y+ FD+ + + ++ E +
Sbjct: 265 LKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTF-MSEQRRWYEAEI 323
Query: 435 QREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAE-GY 493
+I NVV EG+ RVER E +W R+ A F + + +A +L + G
Sbjct: 324 SWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGM 383
Query: 494 SVEETEGCLTLGWHSRPLIAASAW 517
E+ + L L W ++ A+ W
Sbjct: 384 KKEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 265 (98.3 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 82/303 (27%), Positives = 136/303 (44%)
Query: 228 YHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQXXXXXXXXXX 287
Y F E P+L+F +FTANQ ILE+F+G D +H+VDF++ +G QW +LIQ
Sbjct: 330 YRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSS 389
Query: 288 XX-XXXXXXXXSPDG-RDS--LREIGLRLAELARSVNIRFTFRGVAASRLEDVKPWMLQV 343
SP D LR L A + F + L + W L +
Sbjct: 390 SAPSLKITAFASPSTVSDEFELRFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSL 449
Query: 344 ---SPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESN-HNQPE 399
S KEA+AVN L + ++ + + ++L +++ ++P ++ ++ + +N
Sbjct: 450 FRSSEKEAIAVN--LPISSMV------SGYLPLILRFLKQISPNVVVCSDRSCDRNNDAP 501
Query: 400 FLDRFTTALYYYSTMFDSLEACPLQPEKALAEI--YLQREICNVVCCEGSARVERHEPLA 457
F + AL YY+++ +SL++ L +A I + + + +ER P
Sbjct: 502 FPNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLTNRYRWMERSPP-- 559
Query: 458 KWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGC---LTLGWHSRPLIAA 514
WR+ GF P+ L A QA LL G+ +E+ + L L W + L+
Sbjct: 560 -WRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTV 618
Query: 515 SAW 517
SAW
Sbjct: 619 SAW 621
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 232 (86.7 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 93/382 (24%), Positives = 155/382 (40%)
Query: 150 EDSGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCGIGKVAGCFIDALSFR 209
++ G + L+ + V+ E+ +A ++ + L R + + A F +AL
Sbjct: 116 DNGGFDFIEDLIRVVDCVESDELQLAQVVLSRLNQRL-RSPAGRPLQRAAFYFKEALGSF 174
Query: 210 IMGVGGSICGSVSENEILYH-----HFYEACPYLKFAHFTANQAILEAFDGHDC---VHV 261
+ G + S +EI+ + P F+HFTANQAIL++ VHV
Sbjct: 175 LTGSNRNPIRLSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHV 234
Query: 262 VDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGLRLAELARSVNI 321
VDF + G Q+ +L++ + + R + L + A + I
Sbjct: 235 VDFEIGFGGQYASLMREITEKSVSGGFLRVTAVV--AEECAVETRLVKENLTQFAAEMKI 292
Query: 322 RFTFRGVAASRLEDVKPWMLQ-VSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRN 380
RF V E + ++ V + + + S +L G N+ +R
Sbjct: 293 RFQIEFVLMKTFEMLSFKAIRFVEGERTVVLISPAIFRRLSGITDFVNN--------LRR 344
Query: 381 LNPKIMTVVEQES---NHNQPEFLDRFTTALYYYSTMFDSLEAC--PLQPEKALAEIYLQ 435
++PK++ V+ E F F +AL +Y+ + +SL+A P K + E ++
Sbjct: 345 VSPKVVVFVDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVL 404
Query: 436 REICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSV 495
R + +A RH WR AG RP+ L A QA LL G+ V
Sbjct: 405 RP--KISAAVETAADRRHTGEMTWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHV 462
Query: 496 EETEGCLTLGWHSRPLIAASAW 517
+ +G L L WH R L+A SAW
Sbjct: 463 AKRQGELVLCWHGRALVATSAW 484
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 231 (86.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 94/382 (24%), Positives = 156/382 (40%)
Query: 150 EDSGIRLVHMLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNPSCG--IGKVAGCFIDALS 207
++ G + L+ + ++ E+ +A ++ + R+ S G + + A F +AL
Sbjct: 93 DNGGFDYIEDLIRVVDCIESDELHLAHVVLSQLN---QRLQTSAGRPLQRAAFYFKEALG 149
Query: 208 FRIMGVGGSICGSVSE--NEI-LYHHFYEACPYLKFAHFTANQAILEAFDGHDC---VHV 261
+ G + S S+ +I F P F+HFTANQAIL++ VHV
Sbjct: 150 SLLTGTNRNQLFSWSDIVQKIRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHV 209
Query: 262 VDFNLMHGLQWPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGLRLAELARSVNI 321
VDF + G Q+ +L++ + D R + L + A + I
Sbjct: 210 VDFEIGFGGQYASLMREIAEKSANGGFLRVTAVV--AEDCAVETRLVKENLTQFAAEMKI 267
Query: 322 RFTFRGVAASRLEDVKPWMLQ-VSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRN 380
RF V E + ++ V + + + S +++G N+ LG
Sbjct: 268 RFQIEFVLMKTFEILSFKAIRFVDGERTVVLISPAIFRRVIGIAEFVNN-----LG---R 319
Query: 381 LNPKIMTVVEQES---NHNQPEFLDRFTTALYYYSTMFDSLEAC--PLQPEKALAEIYLQ 435
++P ++ V+ E F F +A +Y+ + +SL+A P K + E +L
Sbjct: 320 VSPNVVVFVDSEGCTETAGSGSFRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLL 379
Query: 436 REICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSV 495
R + +A R WR L AG RP+ L A QA LL G+ V
Sbjct: 380 RP--KISAAVETAANRRSAGQMTWREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHV 437
Query: 496 EETEGCLTLGWHSRPLIAASAW 517
+ +G L L WH R L+A SAW
Sbjct: 438 AKRQGELVLCWHGRALVATSAW 459
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 226 (84.6 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 71/256 (27%), Positives = 116/256 (45%)
Query: 159 MLMTCAESVQRGEMAVAGSLIEDMKGLLTRVNP-SCGIGKVAGCFIDALSFRI---MGVG 214
+L+ CA+ +QRG++ A E + L +P ++A F AL+ R+ G G
Sbjct: 53 LLLACADLLQRGDLPAARRAAEIV--LAAAASPRGDAADRLAYHFARALALRVDAKAGHG 110
Query: 215 GSICGSVSENEI---LYHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNLMHGLQ 271
+ G + Y F + P+L+FAH TANQAILEA DG VH++D + +HG+Q
Sbjct: 111 HVVVGGGAARPASSGAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQ 170
Query: 272 WPALIQXXXXXXXXXXXXXXXXXXXXSPDGRDSLREIGLRLAELARSVNIRFTFRGVAAS 331
WP L+Q D RD+L G RL ARS+++ F F + S
Sbjct: 171 WPPLLQAIAERADPALGPPEVRVTGAGAD-RDTLLRTGNRLRAFARSIHLPFHFTPLLLS 229
Query: 332 RLEDVKPWMLQVSPKEALAVNSI-----LQLHK---------LLGSDPARNSPMEMVLGW 377
+ S A A ++ L+ H + + A + + L W
Sbjct: 230 CATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNLAGHDELAAFLKW 289
Query: 378 IRNLNPKIMTVVEQES 393
++ ++P ++T+ E+E+
Sbjct: 290 VKAMSPAVVTIAEREA 305
Score = 225 (84.3 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 68/204 (33%), Positives = 102/204 (50%)
Query: 324 TFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNP 383
T G AA+ L+ P E LAVN ++ LH L G D + L W++ ++P
Sbjct: 241 TSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNLAGHDE-----LAAFLKWVKAMSP 295
Query: 384 KIMTVVEQESNHNQP--EFLD----RFTTALYYYSTMFDSLEAC--PLQPEK-ALAEIYL 434
++T+ E+E+ + +D R A+ +YS +F++LEA P E+ A+ + L
Sbjct: 296 AVVTIAEREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVL 355
Query: 435 QREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTL-FSAEGY 493
REI V G R R + +W AGF L + A QA +LL L + +EGY
Sbjct: 356 GREIEAAVGPSGG-RWWRG--IERWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGY 412
Query: 494 SVEETEGCLTLGWHSRPLIAASAW 517
V+E G LGW +RPL++ SAW
Sbjct: 413 LVQEARGACFLGWQTRPLLSVSAW 436
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 155 (59.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 47/163 (28%), Positives = 83/163 (50%)
Query: 304 SLREIGLRLAELARSVNIRFTFRGVAASRLEDVKPWM--LQVSP---KEALAVNSILQLH 358
S E+G +L A + N+ FR +++S + + + L++ P EAL VN + LH
Sbjct: 42 SYEELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLH 101
Query: 359 KLLGSDPARNSPMEMV-LGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDS 417
+ D S + V L +R+LNP I+T+++++S+ F+ R + Y +D+
Sbjct: 102 YI--PDEILTSNLRSVFLKELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDT 159
Query: 418 LEACPLQ--PEKALAEIYLQREICNVVCCEGSARVERHEPLAK 458
E + ++ E + +I NVV EG+ RVER EP ++
Sbjct: 160 AEMFLTRGSEQRQWYEADISWKIDNVVAKEGAERVERLEPKSR 202
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 148 (57.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 32/70 (45%), Positives = 40/70 (57%)
Query: 449 RVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHS 508
RVERHE L KW+ R AGF L S L+ +S E Y++ E +G + LGW
Sbjct: 3 RVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRCYS-EHYTLVEKDGAMLLGWKK 61
Query: 509 RPLIAASAWH 518
R LI+ASAWH
Sbjct: 62 RNLISASAWH 71
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 72/299 (24%), Positives = 115/299 (38%)
Query: 231 FYEACPYLKFAHFTANQAILE--AFDGHDC--VHVVDFNLMHGLQWPALIQXXXXXXXXX 286
FYE P+ + AN AIL+ A D D +H++D + HG+QWP L++
Sbjct: 227 FYEVSPWFALPNNMANSAILQILAQDPKDKKDLHIIDIGVSHGMQWPTLLEALSCRLEGP 286
Query: 287 X-XXXXXXXXXXSPDGRDSLR----EIGLRLAELARSVNIRFTFRGVAASRLEDVKPWML 341
+ D S+ G +L ARS+ I S L+ ++ ++
Sbjct: 287 PPRVRITVISDLTADIPFSVGPPGYNYGSQLLGFARSLKINLQI-----SVLDKLQ--LI 339
Query: 342 QVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESN-HNQPEF 400
SP E L V + +LH L S N L +R+L PK + + E + +F
Sbjct: 340 DTSPHENLIVCAQFRLHHLKHSI---NDERGETLKAVRSLRPKGVVLCENNGECSSSADF 396
Query: 401 LDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWR 460
F+ L Y DS + + E + ++ E V+ G + +E KW
Sbjct: 397 AAGFSKKLEYVWKFLDSTSS-GFKEENSEERKLMEGEATKVLMNAG----DMNEGKEKWY 451
Query: 461 NRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLG--WHSRPLIAASAW 517
R+ AGF +A A LL + + + +G G W + S W
Sbjct: 452 ERMREAGFFVEAFEEDAVDGAKSLLRKYD-NNWEIRMEDGDTFAGLMWKGEAVSFCSLW 509
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 531 471 0.00099 118 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 622 (66 KB)
Total size of DFA: 289 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.10u 0.15s 33.25t Elapsed: 00:00:01
Total cpu time: 33.11u 0.15s 33.26t Elapsed: 00:00:01
Start: Fri May 10 13:16:25 2013 End: Fri May 10 13:16:26 2013