Query 009607
Match_columns 531
No_of_seqs 195 out of 726
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 08:58:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009607.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009607hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zsh_B Della protein GAI; plan 100.0 8.3E-44 2.8E-48 304.7 4.9 90 26-128 20-110 (110)
2 4gek_A TRNA (CMO5U34)-methyltr 97.2 0.0019 6.6E-08 63.6 11.2 170 258-473 71-242 (261)
3 3bkx_A SAM-dependent methyltra 96.3 0.12 4.3E-06 49.4 15.9 127 247-398 33-167 (275)
4 4a6d_A Hydroxyindole O-methylt 96.0 0.013 4.5E-07 59.8 8.1 160 246-473 168-331 (353)
5 3dtn_A Putative methyltransfer 95.9 0.019 6.4E-07 53.9 8.1 177 247-473 33-211 (234)
6 3dlc_A Putative S-adenosyl-L-m 95.7 0.039 1.3E-06 50.5 9.1 112 246-390 33-147 (219)
7 2aot_A HMT, histamine N-methyl 95.3 0.1 3.5E-06 51.2 11.1 118 256-389 51-170 (292)
8 3dh0_A SAM dependent methyltra 95.3 0.23 7.8E-06 45.7 12.8 113 247-389 27-141 (219)
9 2ip2_A Probable phenazine-spec 95.2 0.17 5.6E-06 50.5 12.5 115 247-392 158-274 (334)
10 1vl5_A Unknown conserved prote 95.0 0.2 6.8E-06 47.8 11.9 109 248-389 28-138 (260)
11 1qzz_A RDMB, aclacinomycin-10- 94.8 0.25 8.6E-06 49.8 12.6 113 247-391 172-288 (374)
12 2r3s_A Uncharacterized protein 94.6 0.22 7.4E-06 49.3 11.4 117 247-394 153-275 (335)
13 1x19_A CRTF-related protein; m 94.6 0.29 9.9E-06 49.4 12.4 116 246-393 179-298 (359)
14 3mcz_A O-methyltransferase; ad 94.5 0.17 5.9E-06 50.7 10.6 116 248-392 169-289 (352)
15 3gwz_A MMCR; methyltransferase 94.4 0.16 5.3E-06 51.9 9.9 117 246-394 191-311 (369)
16 3i53_A O-methyltransferase; CO 94.3 0.17 5.9E-06 50.4 10.0 113 248-392 160-276 (332)
17 3mgg_A Methyltransferase; NYSG 94.2 0.36 1.2E-05 46.3 11.7 103 256-389 36-140 (276)
18 3sm3_A SAM-dependent methyltra 94.0 0.45 1.5E-05 43.8 11.5 163 258-474 31-205 (235)
19 3dp7_A SAM-dependent methyltra 93.9 0.12 4.1E-06 52.7 8.0 117 249-394 171-291 (363)
20 3ujc_A Phosphoethanolamine N-m 93.8 0.15 5.1E-06 48.2 7.9 123 236-389 34-157 (266)
21 1xxl_A YCGJ protein; structura 93.5 1.7 5.9E-05 40.8 14.9 111 246-389 10-122 (239)
22 3kkz_A Uncharacterized protein 93.3 0.52 1.8E-05 45.1 11.0 125 232-389 20-148 (267)
23 3f4k_A Putative methyltransfer 93.3 1 3.5E-05 42.3 12.9 127 231-390 19-149 (257)
24 3ccf_A Cyclopropane-fatty-acyl 92.8 0.53 1.8E-05 45.4 10.3 123 248-408 48-171 (279)
25 4fsd_A Arsenic methyltransfera 92.8 0.67 2.3E-05 47.5 11.6 110 257-389 83-201 (383)
26 3lst_A CALO1 methyltransferase 92.7 0.27 9.2E-06 49.6 8.3 110 247-391 174-287 (348)
27 3htx_A HEN1; HEN1, small RNA m 92.5 0.25 8.6E-06 56.9 8.4 120 249-394 713-838 (950)
28 1tw3_A COMT, carminomycin 4-O- 92.3 0.79 2.7E-05 46.0 11.2 114 247-392 173-290 (360)
29 3h2b_A SAM-dependent methyltra 91.6 0.53 1.8E-05 42.8 8.1 98 258-390 42-140 (203)
30 3vc1_A Geranyl diphosphate 2-C 91.6 1.7 5.8E-05 42.8 12.4 110 247-389 106-219 (312)
31 3bus_A REBM, methyltransferase 91.5 1.1 3.9E-05 42.5 10.7 110 247-388 51-163 (273)
32 3hnr_A Probable methyltransfer 91.1 0.39 1.3E-05 44.2 6.7 108 247-389 35-143 (220)
33 3reo_A (ISO)eugenol O-methyltr 91.0 0.57 2E-05 47.8 8.5 110 246-393 191-303 (368)
34 1xtp_A LMAJ004091AAA; SGPP, st 90.9 0.46 1.6E-05 44.6 7.2 114 246-390 82-196 (254)
35 4htf_A S-adenosylmethionine-de 90.8 4.3 0.00015 39.0 14.2 109 249-390 61-172 (285)
36 3p9c_A Caffeic acid O-methyltr 90.4 0.67 2.3E-05 47.3 8.4 109 246-392 189-300 (364)
37 3l8d_A Methyltransferase; stru 89.8 3.1 0.0001 38.5 11.8 98 258-390 54-152 (242)
38 3e23_A Uncharacterized protein 89.6 1.1 3.6E-05 41.1 8.3 96 258-390 44-140 (211)
39 2fk8_A Methoxy mycolic acid sy 87.7 12 0.00042 36.4 15.0 111 246-389 79-192 (318)
40 1fp2_A Isoflavone O-methyltran 87.6 1.3 4.4E-05 44.5 8.1 33 257-296 188-220 (352)
41 2p35_A Trans-aconitate 2-methy 86.8 2.8 9.6E-05 39.3 9.4 105 248-390 24-131 (259)
42 3g5l_A Putative S-adenosylmeth 86.6 2.8 9.6E-05 39.3 9.4 113 244-390 31-144 (253)
43 2qe6_A Uncharacterized protein 86.3 11 0.00038 36.7 13.8 137 228-392 44-198 (274)
44 3dli_A Methyltransferase; PSI- 86.2 0.7 2.4E-05 43.4 4.9 94 258-389 42-138 (240)
45 3jwg_A HEN1, methyltransferase 86.1 0.95 3.3E-05 41.7 5.7 119 247-394 19-144 (219)
46 3m70_A Tellurite resistance pr 85.9 3.3 0.00011 39.8 9.7 108 248-389 111-221 (286)
47 2o57_A Putative sarcosine dime 85.5 4 0.00014 39.4 10.0 114 247-392 68-189 (297)
48 3lcc_A Putative methyl chlorid 85.3 4.7 0.00016 37.4 10.1 101 259-389 68-169 (235)
49 3gu3_A Methyltransferase; alph 85.2 23 0.0008 33.9 15.4 101 256-389 21-124 (284)
50 4e2x_A TCAB9; kijanose, tetron 84.2 1.8 6.2E-05 44.4 7.3 109 248-390 98-207 (416)
51 3ege_A Putative methyltransfer 83.7 1.4 4.7E-05 42.2 5.7 42 247-297 24-65 (261)
52 1kpg_A CFA synthase;, cyclopro 83.2 6.6 0.00023 37.6 10.5 110 247-389 54-166 (287)
53 2vdw_A Vaccinia virus capping 83.0 7.1 0.00024 38.7 10.9 109 258-389 49-167 (302)
54 3lcv_B Sisomicin-gentamicin re 83.0 3 0.0001 42.0 7.9 132 248-418 125-258 (281)
55 3ocj_A Putative exported prote 82.9 7.6 0.00026 37.9 10.9 106 257-390 118-226 (305)
56 1ve3_A Hypothetical protein PH 82.5 9.5 0.00032 34.7 10.8 100 258-390 39-141 (227)
57 1zg3_A Isoflavanone 4'-O-methy 82.4 2.4 8E-05 42.7 7.1 107 248-392 182-295 (358)
58 3ofk_A Nodulation protein S; N 82.4 4.8 0.00017 36.6 8.7 109 248-390 42-153 (216)
59 3hem_A Cyclopropane-fatty-acyl 82.3 9.9 0.00034 36.8 11.4 116 247-389 62-181 (302)
60 3frh_A 16S rRNA methylase; met 81.8 1.8 6.2E-05 42.9 5.8 101 258-391 106-206 (253)
61 1nkv_A Hypothetical protein YJ 81.6 7.3 0.00025 36.3 9.9 110 247-389 26-138 (256)
62 3jwh_A HEN1; methyltransferase 81.4 3 0.0001 38.3 6.9 115 249-392 21-142 (217)
63 2xvm_A Tellurite resistance pr 80.9 10 0.00036 33.5 10.2 108 247-388 22-133 (199)
64 3fzg_A 16S rRNA methylase; met 80.7 2.9 9.9E-05 40.1 6.6 99 260-391 52-152 (200)
65 3g2m_A PCZA361.24; SAM-depende 79.4 3 0.0001 40.5 6.6 111 247-390 73-189 (299)
66 3giw_A Protein of unknown func 79.0 12 0.0004 37.5 10.7 143 226-391 43-201 (277)
67 1fp1_D Isoliquiritigenin 2'-O- 78.8 4.9 0.00017 40.7 8.1 44 246-296 197-241 (372)
68 4dcm_A Ribosomal RNA large sub 76.5 8.7 0.0003 39.5 9.3 124 245-391 210-334 (375)
69 1vlm_A SAM-dependent methyltra 76.3 26 0.00087 32.0 11.7 23 452-474 164-186 (219)
70 3g5t_A Trans-aconitate 3-methy 75.5 9.8 0.00033 36.8 8.9 111 256-389 35-147 (299)
71 3i9f_A Putative type 11 methyl 74.3 8 0.00027 33.7 7.3 40 249-297 9-48 (170)
72 3ou2_A SAM-dependent methyltra 74.2 9.7 0.00033 34.3 8.0 109 246-390 34-146 (218)
73 3cgg_A SAM-dependent methyltra 72.1 20 0.00069 31.3 9.4 40 248-297 38-77 (195)
74 3bkw_A MLL3908 protein, S-aden 72.1 25 0.00085 32.2 10.4 43 247-297 33-75 (243)
75 3hm2_A Precorrin-6Y C5,15-meth 71.9 25 0.00087 30.4 10.0 61 247-322 15-75 (178)
76 3mq2_A 16S rRNA methyltransfer 70.8 9.5 0.00032 34.8 7.2 116 249-390 19-139 (218)
77 2yxd_A Probable cobalt-precorr 70.5 17 0.00058 31.5 8.5 103 248-389 26-129 (183)
78 2yqz_A Hypothetical protein TT 70.2 20 0.00068 33.3 9.4 100 256-390 38-140 (263)
79 1dus_A MJ0882; hypothetical pr 68.5 25 0.00085 30.6 9.2 115 246-393 41-159 (194)
80 3g07_A 7SK snRNA methylphospha 67.9 6 0.00021 38.6 5.4 57 248-315 35-93 (292)
81 2p7i_A Hypothetical protein; p 67.8 11 0.00038 34.5 7.0 94 259-389 44-139 (250)
82 3pfg_A N-methyltransferase; N, 67.8 28 0.00095 32.6 10.0 98 258-390 51-150 (263)
83 1wzn_A SAM-dependent methyltra 67.5 31 0.0011 31.9 10.2 111 249-391 33-145 (252)
84 2zfu_A Nucleomethylin, cerebra 67.5 7.2 0.00025 35.5 5.6 19 455-473 158-176 (215)
85 3p9n_A Possible methyltransfer 66.4 8.3 0.00028 34.6 5.7 109 259-396 46-158 (189)
86 3thr_A Glycine N-methyltransfe 65.8 4.7 0.00016 38.7 4.1 123 249-390 49-174 (293)
87 3bgv_A MRNA CAP guanine-N7 met 65.6 29 0.00098 33.7 9.9 115 257-390 34-154 (313)
88 2qn6_B Translation initiation 65.4 3.8 0.00013 34.5 2.9 42 285-326 50-91 (93)
89 1y8c_A S-adenosylmethionine-de 64.8 20 0.00067 32.8 8.1 103 257-390 37-141 (246)
90 3cc8_A Putative methyltransfer 62.7 41 0.0014 30.2 9.7 42 246-297 22-63 (230)
91 2p8j_A S-adenosylmethionine-de 58.7 27 0.00091 31.2 7.6 101 258-390 24-127 (209)
92 2y1w_A Histone-arginine methyl 58.5 19 0.00066 36.1 7.3 114 246-390 39-154 (348)
93 3m33_A Uncharacterized protein 58.2 21 0.00073 32.9 7.1 31 258-297 49-79 (226)
94 3e8s_A Putative SAM dependent 58.0 30 0.001 31.0 7.8 45 244-297 39-83 (227)
95 3d2l_A SAM-dependent methyltra 57.4 39 0.0013 30.8 8.7 109 249-390 27-136 (243)
96 3eey_A Putative rRNA methylase 56.2 47 0.0016 29.5 8.8 54 259-326 24-79 (197)
97 2esr_A Methyltransferase; stru 55.6 41 0.0014 29.3 8.2 106 258-396 32-143 (177)
98 1xj5_A Spermidine synthase 1; 54.5 26 0.00088 35.4 7.4 133 258-416 121-257 (334)
99 1pjz_A Thiopurine S-methyltran 53.7 23 0.00078 32.4 6.4 32 257-297 22-53 (203)
100 3iv6_A Putative Zn-dependent a 53.6 8.5 0.00029 37.8 3.6 42 247-297 35-76 (261)
101 2kw5_A SLR1183 protein; struct 53.4 1.2E+02 0.0041 26.8 11.3 97 260-391 32-131 (202)
102 1ri5_A MRNA capping enzyme; me 53.4 62 0.0021 30.4 9.6 105 257-390 64-173 (298)
103 2ex4_A Adrenal gland protein A 52.6 23 0.00078 32.8 6.3 101 257-389 79-183 (241)
104 3r0q_C Probable protein argini 52.1 28 0.00096 35.4 7.3 115 247-392 53-170 (376)
105 3b3j_A Histone-arginine methyl 51.7 21 0.00071 38.0 6.4 114 247-391 148-263 (480)
106 3u81_A Catechol O-methyltransf 50.6 21 0.00071 32.9 5.5 113 259-396 60-175 (221)
107 2g72_A Phenylethanolamine N-me 50.5 24 0.00083 33.8 6.2 23 452-474 232-254 (289)
108 3p2e_A 16S rRNA methylase; met 49.5 62 0.0021 30.2 8.8 108 257-389 24-137 (225)
109 2gb4_A Thiopurine S-methyltran 49.4 40 0.0014 32.3 7.6 32 257-297 68-99 (252)
110 3uwp_A Histone-lysine N-methyl 47.8 44 0.0015 35.6 8.0 120 245-389 161-286 (438)
111 3q7e_A Protein arginine N-meth 47.3 40 0.0014 33.8 7.5 103 259-393 68-175 (349)
112 2gs9_A Hypothetical protein TT 47.1 34 0.0012 30.7 6.3 38 248-297 28-65 (211)
113 2o07_A Spermidine synthase; st 46.3 46 0.0016 32.9 7.7 134 259-419 97-234 (304)
114 2avn_A Ubiquinone/menaquinone 46.3 1.3E+02 0.0045 28.0 10.6 41 246-297 45-85 (260)
115 4azs_A Methyltransferase WBDD; 44.5 15 0.00053 39.6 4.1 83 257-362 66-149 (569)
116 1zs4_A Regulatory protein CII; 44.1 9.2 0.00032 31.7 1.7 24 30-53 52-75 (83)
117 4hg2_A Methyltransferase type 43.9 67 0.0023 30.9 8.2 100 260-398 42-143 (257)
118 1yzh_A TRNA (guanine-N(7)-)-me 43.7 52 0.0018 29.9 7.1 112 258-392 42-157 (214)
119 2fpo_A Methylase YHHF; structu 43.7 39 0.0013 30.8 6.2 101 259-393 56-162 (202)
120 2ift_A Putative methylase HI07 41.8 1E+02 0.0034 27.9 8.7 106 259-395 55-167 (201)
121 3bxo_A N,N-dimethyltransferase 41.3 1.5E+02 0.0052 26.6 9.9 100 256-390 39-140 (239)
122 2fyt_A Protein arginine N-meth 41.1 54 0.0018 32.8 7.3 109 247-388 54-168 (340)
123 1g6q_1 HnRNP arginine N-methyl 40.3 56 0.0019 32.3 7.2 113 248-390 29-144 (328)
124 3orh_A Guanidinoacetate N-meth 40.0 31 0.0011 32.4 5.0 101 258-388 61-167 (236)
125 3bwc_A Spermidine synthase; SA 38.7 86 0.0029 30.7 8.2 109 259-392 97-211 (304)
126 2pjd_A Ribosomal RNA small sub 37.0 20 0.00068 35.8 3.3 118 245-390 184-302 (343)
127 3mti_A RRNA methylase; SAM-dep 36.8 1.1E+02 0.0037 26.7 7.9 42 259-313 24-65 (185)
128 3grz_A L11 mtase, ribosomal pr 36.2 87 0.003 27.9 7.2 66 245-326 46-114 (205)
129 3e05_A Precorrin-6Y C5,15-meth 35.6 2.2E+02 0.0076 25.1 10.0 109 247-389 30-140 (204)
130 2efj_A 3,7-dimethylxanthine me 35.1 3.5E+02 0.012 27.9 12.4 45 258-302 53-107 (384)
131 3ggd_A SAM-dependent methyltra 33.6 29 0.00099 32.1 3.6 105 258-392 57-165 (245)
132 1u2z_A Histone-lysine N-methyl 32.5 1E+02 0.0034 32.5 7.9 118 247-390 232-358 (433)
133 1uwv_A 23S rRNA (uracil-5-)-me 32.4 2.3E+02 0.0078 29.2 10.6 109 249-390 278-388 (433)
134 1inl_A Spermidine synthase; be 31.6 1.9E+02 0.0065 28.1 9.4 135 259-419 92-230 (296)
135 2a14_A Indolethylamine N-methy 31.5 1.8E+02 0.0063 27.2 9.0 20 455-474 217-236 (263)
136 4dzr_A Protein-(glutamine-N5) 31.4 34 0.0012 30.4 3.6 43 249-298 21-64 (215)
137 3njr_A Precorrin-6Y methylase; 31.3 1.3E+02 0.0045 27.2 7.7 62 248-326 46-109 (204)
138 1yz7_A Probable translation in 30.3 34 0.0012 32.3 3.4 44 285-328 133-176 (188)
139 2jjq_A Uncharacterized RNA met 30.0 2.3E+02 0.008 29.3 10.2 94 260-390 293-386 (425)
140 3tva_A Xylose isomerase domain 29.5 50 0.0017 31.3 4.6 53 369-421 238-290 (290)
141 3g89_A Ribosomal RNA small sub 29.2 74 0.0025 30.2 5.8 102 256-389 79-182 (249)
142 2yxe_A Protein-L-isoaspartate 28.9 77 0.0026 28.4 5.6 56 248-313 68-123 (215)
143 2pxx_A Uncharacterized protein 28.9 1E+02 0.0035 27.1 6.4 43 257-311 42-84 (215)
144 1jsx_A Glucose-inhibited divis 28.5 94 0.0032 27.6 6.1 96 259-390 67-164 (207)
145 1l3i_A Precorrin-6Y methyltran 28.3 1E+02 0.0034 26.5 6.1 52 248-312 24-75 (192)
146 1iy9_A Spermidine synthase; ro 28.1 1.6E+02 0.0056 28.3 8.1 137 258-419 76-214 (275)
147 3lpm_A Putative methyltransfer 27.9 3.7E+02 0.013 24.9 10.9 112 257-390 49-175 (259)
148 3gdh_A Trimethylguanosine synt 27.8 3.3E+02 0.011 24.6 9.9 53 258-327 79-133 (241)
149 4hc4_A Protein arginine N-meth 27.7 83 0.0028 32.4 6.2 104 253-388 82-186 (376)
150 2i7c_A Spermidine synthase; tr 27.2 76 0.0026 30.8 5.6 131 259-418 80-216 (283)
151 3adn_A Spermidine synthase; am 27.0 2.8E+02 0.0095 27.1 9.7 133 258-419 84-223 (294)
152 1o9g_A RRNA methyltransferase; 25.9 76 0.0026 29.5 5.1 56 249-313 43-98 (250)
153 3dmg_A Probable ribosomal RNA 25.4 3.2E+02 0.011 27.8 10.1 107 257-391 233-340 (381)
154 2pt6_A Spermidine synthase; tr 24.5 77 0.0026 31.5 5.1 132 259-419 118-255 (321)
155 3tfw_A Putative O-methyltransf 24.2 1.1E+02 0.0036 28.8 5.8 101 259-390 65-169 (248)
156 2ksn_A Ubiquitin domain-contai 23.2 65 0.0022 29.0 3.7 30 155-184 57-86 (137)
157 1ws6_A Methyltransferase; stru 22.4 96 0.0033 26.3 4.7 104 259-395 43-151 (171)
158 1wy7_A Hypothetical protein PH 22.1 94 0.0032 27.7 4.8 92 258-382 50-141 (207)
159 3fut_A Dimethyladenosine trans 21.8 72 0.0025 31.2 4.2 52 247-312 37-88 (271)
160 3dxy_A TRNA (guanine-N(7)-)-me 21.5 93 0.0032 28.8 4.8 114 257-392 34-151 (218)
161 3mb5_A SAM-dependent methyltra 21.1 1.4E+02 0.0049 27.4 6.0 56 248-313 84-139 (255)
162 1nv8_A HEMK protein; class I a 20.5 1.2E+02 0.0042 29.3 5.5 52 259-326 125-178 (284)
163 3dr5_A Putative O-methyltransf 20.5 1.6E+02 0.0053 27.3 6.1 62 251-326 50-114 (221)
164 1o54_A SAM-dependent O-methylt 20.3 3E+02 0.01 25.9 8.2 55 248-312 103-157 (277)
No 1
>2zsh_B Della protein GAI; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_B*
Probab=100.00 E-value=8.3e-44 Score=304.68 Aligned_cols=90 Identities=44% Similarity=0.710 Sum_probs=58.7
Q ss_pred CccchhhhhhhcCCcccchhHHHHHHHHHHHHHHhhCCccc-cccccccccccCCCchhhHHHHhhhccCCCCCCCCCCC
Q 009607 26 PVAEIDGLLAGAGYKVRSSELRQVAQRLERLETVMVNSPAD-ISQLASDTVHYNPSDLASWVDSLLSEFNQPPLPLPSDL 104 (531)
Q Consensus 26 ~~~~~d~~l~~~~~~~~~~~~~~~~~~le~le~~~~~~~~~-~~~~~~dtvh~npsd~~~w~~~~~~e~~~~~~~~~~~~ 104 (531)
..+|||||||++|||||||||++|||||||||+||||+++| +|||||||||||||||++||||||+|||||.
T Consensus 20 ~~~g~DelLA~lGYkVrsSDma~vAQkLEqLE~vmg~a~~dgls~LasDTVHyNPSDLs~WvesMLsEln~~~------- 92 (110)
T 2zsh_B 20 DGNGMDELLAVLGYKVRSSEMADVAQKLEQLEVMMSNVQEDDLSQLATETVHYNPAELYTWLDSMLTDLNPPS------- 92 (110)
T ss_dssp ---CBCHHHHTTTCBCBGGGHHHHHHHHHHHHHHHTTC-------CHHHHTTSCTTBHHHHHHHHHHTC-----------
T ss_pred ccccHHHHHHHcCccccchhHHHHHHHHHHHHHHHccccchhHHHhhhhhhcCChHHHHHHHHHHHHHcCCCC-------
Confidence 45789999999999999999999999999999999999999 9999999999999999999999999999752
Q ss_pred CCCCCCCCCCCcccccCCCcccCC
Q 009607 105 PDLPDIIAGPSVNHTAVGNYLTDN 128 (531)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~ 128 (531)
++++|| |+||||+|+|++
T Consensus 93 ---~~~~yd---L~aIpg~a~y~~ 110 (110)
T 2zsh_B 93 ---SNAEYD---LKAIPGDAILNQ 110 (110)
T ss_dssp ------------------------
T ss_pred ---Cccccc---hhcCCcccccCC
Confidence 145689 999999999963
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.19 E-value=0.0019 Score=63.61 Aligned_cols=170 Identities=14% Similarity=0.136 Sum_probs=90.5
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
.-+|+|+|.|.|. +...|+.+- ++|..+||||+... ..++...+++.++. ...+.+|.. . .+.++.
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s~----~ml~~A~~~~~~~~--~~~~v~~~~--~-D~~~~~ 136 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNSP----AMIERCRRHIDAYK--APTPVDVIE--G-DIRDIA 136 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESCH----HHHHHHHHHHHTSC--CSSCEEEEE--S-CTTTCC
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECCH----HHHHHHHHHHHhhc--cCceEEEee--c-cccccc
Confidence 3479999999884 455566553 34678999998752 56666666554332 223455532 2 333332
Q ss_pred ccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEE-EEEecCCCCCCcchHHHHHHHHHHHHHHh
Q 009607 338 PWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIM-TVVEQESNHNQPEFLDRFTTALYYYSTMF 415 (531)
Q Consensus 338 ~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIv-tlvEqEanhN~p~F~~RF~eAL~yYsalF 415 (531)
..+-..++.|+ .||++.. ..+..+|+.| |.|+|.-. ++.|.-.. ..+.+...+.+..+.|. ..
T Consensus 137 -----~~~~d~v~~~~--~l~~~~~------~~~~~~l~~i~~~LkpGG~lii~e~~~~-~~~~~~~~~~~~~~~~~-~~ 201 (261)
T 4gek_A 137 -----IENASMVVLNF--TLQFLEP------SERQALLDKIYQGLNPGGALVLSEKFSF-EDAKVGELLFNMHHDFK-RA 201 (261)
T ss_dssp -----CCSEEEEEEES--CGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEEEBCC-SSHHHHHHHHHHHHHHH-HH
T ss_pred -----ccccccceeee--eeeecCc------hhHhHHHHHHHHHcCCCcEEEEEeccCC-CCHHHHHHHHHHHHHHH-HH
Confidence 22224455454 5788743 4567788777 66899865 45554332 22333333322111111 10
Q ss_pred hhhhcCCCCHHHHHHHHHHhhhhhhhhhccCCCccccccchhhHHHHHhcCCceeccC
Q 009607 416 DSLEACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHL 473 (531)
Q Consensus 416 DSLea~~~s~er~~~E~~lgreI~NiVAcEG~~RvERhE~~~~Wr~rm~~AGF~~vpl 473 (531)
...........+. .+. ++-+..+.+.++.+|+.|||+.+.+
T Consensus 202 ~g~s~~ei~~~~~--------~l~---------~~~~~~s~~~~~~~L~~AGF~~ve~ 242 (261)
T 4gek_A 202 NGYSELEISQKRS--------MLE---------NVMLTDSVETHKARLHKAGFEHSEL 242 (261)
T ss_dssp TTGGGSTTHHHHH--------HHH---------HHCCCBCHHHHHHHHHHHTCSEEEE
T ss_pred cCCCHHHHHHHHh--------hhc---------ccccCCCHHHHHHHHHHcCCCeEEE
Confidence 0000000000011 111 2345567889999999999987754
No 3
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.25 E-value=0.12 Score=49.41 Aligned_cols=127 Identities=17% Similarity=0.137 Sum_probs=69.2
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCC--ChhHHHHHHHHHHHHHHhCCc--e
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPD--GRDSLREIGLRLAELARSVNI--R 322 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~--~~~~L~etG~rL~~fA~~lgv--p 322 (531)
..|++.+.-.+.-+|+|+|.|.|.- ...|+.+- .|..++|||+..... ....++...+++. ..++ .
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~--g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~----~~~~~~~ 102 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDL----SAVLADQV--GSSGHVTGIDIASPDYGAPLTLGQAWNHLL----AGPLGDR 102 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHH----HHHHHHHH--CTTCEEEEECSSCTTCCSSSCHHHHHHHHH----TSTTGGG
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHH----HHHHHHHh--CCCCEEEEEECCccccccHHHHHHHHHHHH----hcCCCCc
Confidence 3566666555566899999998853 33344332 244699999875420 0113555544433 3343 2
Q ss_pred EEEEEeccCCcccccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcCC--cEEEEEecCCCCCCc
Q 009607 323 FTFRGVAASRLEDVKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNP--KIMTVVEQESNHNQP 398 (531)
Q Consensus 323 FeF~~v~~~~ledl~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~P--kIvtlvEqEanhN~p 398 (531)
.+|... + ++....+...++ +.|+.+. .|||+.+ + +.+++.++.+.| ..+++.+.....+.+
T Consensus 103 v~~~~~--d---~~~~~~~~~~~~~fD~v~~~~--~l~~~~~-------~-~~~~~~~~~l~~~gG~l~~~~~~~~~~~~ 167 (275)
T 3bkx_A 103 LTVHFN--T---NLSDDLGPIADQHFDRVVLAH--SLWYFAS-------A-NALALLFKNMAAVCDHVDVAEWSMQPTAL 167 (275)
T ss_dssp EEEECS--C---CTTTCCGGGTTCCCSEEEEES--CGGGSSC-------H-HHHHHHHHHHTTTCSEEEEEEECSSCSSG
T ss_pred eEEEEC--C---hhhhccCCCCCCCEEEEEEcc--chhhCCC-------H-HHHHHHHHHHhCCCCEEEEEEecCCCCch
Confidence 455322 1 111112222223 4555444 4687644 2 458899999887 567777766654444
No 4
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=96.01 E-value=0.013 Score=59.82 Aligned_cols=160 Identities=18% Similarity=0.280 Sum_probs=90.0
Q ss_pred HHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEE
Q 009607 246 NQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTF 325 (531)
Q Consensus 246 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF 325 (531)
.+.|++++.-.+.-+|+|+|.+.|. +..+|+.+ -|.+|+|..+.| ..++.+.+++. .+..- ..+|
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~---~p~~~~~~~dlp-----~v~~~a~~~~~-~~~~~--rv~~ 232 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSL---YPGCKITVFDIP-----EVVWTAKQHFS-FQEEE--QIDF 232 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHH---CSSCEEEEEECH-----HHHHHHHHHSC-C--CC--SEEE
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHh---CCCceeEeccCH-----HHHHHHHHhhh-hcccC--ceee
Confidence 4678888765566689999999985 55666665 367899998765 33444433321 11111 2444
Q ss_pred EEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcE-EEEEecCCCC--CCcchH
Q 009607 326 RGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKI-MTVVEQESNH--NQPEFL 401 (531)
Q Consensus 326 ~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkI-vtlvEqEanh--N~p~F~ 401 (531)
.+- +-.++ .+...+++....+ ||+..+ .....+|+.+ +.|+|.- ++++|.-.+. +.|.+
T Consensus 233 ~~g--D~~~~------~~~~~D~~~~~~v--lh~~~d------~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~- 295 (353)
T 4a6d_A 233 QEG--DFFKD------PLPEADLYILARV--LHDWAD------GKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLL- 295 (353)
T ss_dssp EES--CTTTS------CCCCCSEEEEESS--GGGSCH------HHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHH-
T ss_pred ecC--ccccC------CCCCceEEEeeee--cccCCH------HHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHH-
Confidence 332 11111 1223355555444 788765 3345677766 5689964 5666654332 22221
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHHhhhhhhhhhccCCCccccccchhhHHHHHhcCCceeccC
Q 009607 402 DRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHL 473 (531)
Q Consensus 402 ~RF~eAL~yYsalFDSLea~~~s~er~~~E~~lgreI~NiVAcEG~~RvERhE~~~~Wr~rm~~AGF~~vpl 473 (531)
.++|| |.=.+.+.|.+| +.++|+..+++|||+.+.+
T Consensus 296 ----------~~~~d---------------------l~ml~~~~g~er-----t~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 296 ----------TQLYS---------------------LNMLVQTEGQER-----TPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp ----------HHHHH---------------------HHHHHSSSCCCC-----CHHHHHHHHHHHTCEEEEE
T ss_pred ----------HHHHH---------------------HHHHHhCCCcCC-----CHHHHHHHHHHCCCceEEE
Confidence 11111 000123345444 5578999999999998765
No 5
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.91 E-value=0.019 Score=53.89 Aligned_cols=177 Identities=15% Similarity=0.094 Sum_probs=90.3
Q ss_pred HHHHhhhC-CCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEE
Q 009607 247 QAILEAFD-GHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTF 325 (531)
Q Consensus 247 qAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF 325 (531)
+.+++.+. ..+.-.|+|+|.|.|. +...|+.+. |..++|||+... ..++.+.+++ +..+ ..+|
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~----~~~~~a~~~~----~~~~-~~~~ 96 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGL----LSAFLMEKY---PEATFTLVDMSE----KMLEIAKNRF----RGNL-KVKY 96 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEESCH----HHHHHHHHHT----CSCT-TEEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCH----HHHHHHHhC---CCCeEEEEECCH----HHHHHHHHhh----ccCC-CEEE
Confidence 56666665 4456899999999984 344444442 457999998742 3444443332 2222 4444
Q ss_pred EEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCcchHHHH
Q 009607 326 RGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQESNHNQPEFLDRF 404 (531)
Q Consensus 326 ~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqEanhN~p~F~~RF 404 (531)
... ..+++... +..=+|-|...|||+.+ ..+..+|+.+ |-|+|.-.+++-.-...+.+.+...+
T Consensus 97 ~~~---d~~~~~~~------~~fD~v~~~~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 161 (234)
T 3dtn_A 97 IEA---DYSKYDFE------EKYDMVVSALSIHHLED------EDKKELYKRSYSILKESGIFINADLVHGETAFIENLN 161 (234)
T ss_dssp EES---CTTTCCCC------SCEEEEEEESCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHH
T ss_pred EeC---chhccCCC------CCceEEEEeCccccCCH------HHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHH
Confidence 322 33333221 22223333356888743 3344577666 55899766544332222333333333
Q ss_pred HHHHHHHHHHhhhhhcCCCCHHHHHHHHHHhhhhhhhhhccCCCccccccchhhHHHHHhcCCceeccC
Q 009607 405 TTALYYYSTMFDSLEACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHL 473 (531)
Q Consensus 405 ~eAL~yYsalFDSLea~~~s~er~~~E~~lgreI~NiVAcEG~~RvERhE~~~~Wr~rm~~AGF~~vpl 473 (531)
...+ ...+. ...-+. .+|.+.... ....+..+.+.|+..|+.|||+.+.+
T Consensus 162 ~~~~---~~~~~---~~~~~~----------~~~~~~~~~---~~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 162 KTIW---RQYVE---NSGLTE----------EEIAAGYER---SKLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp HHHH---HHHHH---TSSCCH----------HHHHTTC-------CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred HHHH---HHHHH---hcCCCH----------HHHHHHHHh---cccccccCHHHHHHHHHHcCCCceee
Confidence 2211 11111 111111 111222111 13456678889999999999998764
No 6
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.70 E-value=0.039 Score=50.45 Aligned_cols=112 Identities=14% Similarity=0.072 Sum_probs=64.3
Q ss_pred HHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eE
Q 009607 246 NQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RF 323 (531)
Q Consensus 246 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pF 323 (531)
.+.|++.+..... +|+|+|.|.|. +...|+.+ |..++|||+... ..++.+.+++ +..++ ..
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s~----~~~~~a~~~~----~~~~~~~~~ 95 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFSK----HMNEIALKNI----ADANLNDRI 95 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESCH----HHHHHHHHHH----HHTTCTTTE
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECCH----HHHHHHHHHH----HhccccCce
Confidence 3566777766666 99999999985 45555555 457999998642 4455544443 34444 25
Q ss_pred EEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 324 TFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 324 eF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
+|... ..+++. +.++..=+|-|...|||+.+ ...+|+.+ +-|+|.-.+++.
T Consensus 96 ~~~~~---d~~~~~-----~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 96 QIVQG---DVHNIP-----IEDNYADLIVSRGSVFFWED--------VATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EEEEC---BTTBCS-----SCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEc---CHHHCC-----CCcccccEEEECchHhhccC--------HHHHHHHHHHhCCCCCEEEEE
Confidence 55432 223322 22332223333445788632 45566655 668998765553
No 7
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=95.31 E-value=0.1 Score=51.16 Aligned_cols=118 Identities=8% Similarity=0.117 Sum_probs=63.3
Q ss_pred CceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccc
Q 009607 256 HDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLED 335 (531)
Q Consensus 256 ~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~led 335 (531)
.+.-+|+|+|.|.|.--..+++.|+.+..+ ..+.+|||++.. ..++...+++.+...--++.|+|.... .++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~S~----~ml~~a~~~~~~~~~~~~v~~~~~~~~---~~~ 122 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEPSA----EQIAKYKELVAKTSNLENVKFAWHKET---SSE 122 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECSCH----HHHHHHHHHHHTCSSCTTEEEEEECSC---HHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeCCH----HHHHHHHHHHHhccCCCcceEEEEecc---hhh
Confidence 456799999999995444567777655211 123459998752 445555444321101124567665432 222
Q ss_pred ccc-cccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHh-cCCcEEEEE
Q 009607 336 VKP-WMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRN-LNPKIMTVV 389 (531)
Q Consensus 336 l~~-~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~-L~PkIvtlv 389 (531)
+.. +.....++..=+|-|.+.|||+.+ .+.+|+.+++ |+|.-.+++
T Consensus 123 ~~~~~~~~~~~~~fD~V~~~~~l~~~~d--------~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 123 YQSRMLEKKELQKWDFIHMIQMLYYVKD--------IPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp HHHHHHTTTCCCCEEEEEEESCGGGCSC--------HHHHHHHHHHTEEEEEEEEE
T ss_pred hhhhhccccCCCceeEEEEeeeeeecCC--------HHHHHHHHHHHcCCCcEEEE
Confidence 210 000012233334555666899755 4567777654 699855443
No 8
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.25 E-value=0.23 Score=45.74 Aligned_cols=113 Identities=12% Similarity=0.132 Sum_probs=63.6
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce-EEE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR-FTF 325 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp-FeF 325 (531)
+.|++.+.-.+.-.|+|+|.|.|.--..|.+.. +|..++|||+.. ...++.+.+++. ..+++ ++|
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s----~~~~~~a~~~~~----~~~~~~~~~ 92 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQ----EEMVNYAWEKVN----KLGLKNVEV 92 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESC----HHHHHHHHHHHH----HHTCTTEEE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECC----HHHHHHHHHHHH----HcCCCcEEE
Confidence 556777665566689999999987544444433 355699999864 245555554443 33443 555
Q ss_pred EEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 326 RGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 326 ~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
... .++++. ...+..=+|-|...||++.+ ...+|+.+ +.|+|.-.+++
T Consensus 93 ~~~---d~~~~~-----~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 93 LKS---EENKIP-----LPDNTVDFIFMAFTFHELSE--------PLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp EEC---BTTBCS-----SCSSCEEEEEEESCGGGCSS--------HHHHHHHHHHHEEEEEEEEE
T ss_pred Eec---ccccCC-----CCCCCeeEEEeehhhhhcCC--------HHHHHHHHHHHhCCCeEEEE
Confidence 332 222221 22332223333445777633 35566655 66899765444
No 9
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=95.20 E-value=0.17 Score=50.45 Aligned_cols=115 Identities=18% Similarity=0.128 Sum_probs=62.6
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFR 326 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~ 326 (531)
+.|++.+.-.+ .+|+|+|.+.|. +...|+.+. |.+++|+++.|. .++...+++.+.. +.-..+|.
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-----~~~~a~~~~~~~~--~~~~v~~~ 222 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDREG-----SLGVARDNLSSLL--AGERVSLV 222 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECTT-----CTHHHHHHTHHHH--HTTSEEEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCcHH-----HHHHHHHHHhhcC--CCCcEEEe
Confidence 56777664444 899999999994 444555442 456999999832 2444444444332 11124554
Q ss_pred EeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEE-EEEecC
Q 009607 327 GVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIM-TVVEQE 392 (531)
Q Consensus 327 ~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIv-tlvEqE 392 (531)
.- .+.+ + +. ..-+.++.+. -||++.+ .....+|+.+ +.|+|.-. +++|.-
T Consensus 223 ~~---d~~~--~--~~-~~~D~v~~~~--vl~~~~~------~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 223 GG---DMLQ--E--VP-SNGDIYLLSR--IIGDLDE------AASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp ES---CTTT--C--CC-SSCSEEEEES--CGGGCCH------HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred cC---CCCC--C--CC-CCCCEEEEch--hccCCCH------HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 32 1211 1 11 1124455444 4677643 3345777766 56799754 555543
No 10
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.02 E-value=0.2 Score=47.76 Aligned_cols=109 Identities=11% Similarity=0.046 Sum_probs=61.4
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce-EEEE
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR-FTFR 326 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp-FeF~ 326 (531)
.|++.+.-.+.-+|+|+|.|.|. +...|+.+. + ++|||+... ..++...++ ++..|++ .+|.
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s~----~~l~~a~~~----~~~~~~~~v~~~ 90 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLTE----DILKVARAF----IEGNGHQQVEYV 90 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESCH----HHHHHHHHH----HHHTTCCSEEEE
T ss_pred HHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCCH----HHHHHHHHH----HHhcCCCceEEE
Confidence 45555555556689999999885 555667653 2 999998642 445444433 3344543 5554
Q ss_pred EeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 327 GVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 327 ~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
.. ..+++. +.++..=+|-|.+.|||+.+ .+.+|+.+ |-|+|.-.+++
T Consensus 91 ~~---d~~~l~-----~~~~~fD~V~~~~~l~~~~d--------~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 91 QG---DAEQMP-----FTDERFHIVTCRIAAHHFPN--------PASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp EC---CC-CCC-----SCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred Ee---cHHhCC-----CCCCCEEEEEEhhhhHhcCC--------HHHHHHHHHHHcCCCCEEEE
Confidence 22 233322 22332323334456888754 34566554 66899865544
No 11
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=94.76 E-value=0.25 Score=49.82 Aligned_cols=113 Identities=20% Similarity=0.247 Sum_probs=64.3
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FT 324 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--Fe 324 (531)
..|++.+.-.+..+|+|+|.|.| .+...|+.+. |.+++|+++.| ..++...+++ +..++. .+
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~~~~~~~~D~~-----~~~~~a~~~~----~~~~~~~~v~ 235 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---PHLRGTLVELA-----GPAERARRRF----ADAGLADRVT 235 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECH-----HHHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---CCCEEEEEeCH-----HHHHHHHHHH----HhcCCCCceE
Confidence 46777766556679999999999 4455555542 46799999752 3455554444 334442 56
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcE-EEEEec
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKI-MTVVEQ 391 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkI-vtlvEq 391 (531)
|..... .+.+.. . -+.++.+ .-||++.+ .....+|+.+ +.|+|.- ++++|.
T Consensus 236 ~~~~d~--~~~~~~-~-----~D~v~~~--~vl~~~~~------~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 236 VAEGDF--FKPLPV-T-----ADVVLLS--FVLLNWSD------EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEECCT--TSCCSC-C-----EEEEEEE--SCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeCCC--CCcCCC-C-----CCEEEEe--ccccCCCH------HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 643211 121110 0 1334433 44787643 2234677666 5679986 555665
No 12
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=94.61 E-value=0.22 Score=49.33 Aligned_cols=117 Identities=19% Similarity=0.100 Sum_probs=66.9
Q ss_pred HHHHhhhCC--CceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--
Q 009607 247 QAILEAFDG--HDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR-- 322 (531)
Q Consensus 247 qAILEA~~g--~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp-- 322 (531)
+.|++.+.. .+..+|+|+|.+.|. +...|+.+. |..++|+++.+ ..++...+++.+ .+++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~~~----~~~~~~ 216 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-----SVLEVAKENARI----QGVASR 216 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-----HHHHHHHHHHHH----HTCGGG
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-----HHHHHHHHHHHh----cCCCcc
Confidence 467777765 667899999999984 444555543 45699999864 345555444433 3442
Q ss_pred EEEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcE-EEEEecCCC
Q 009607 323 FTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKI-MTVVEQESN 394 (531)
Q Consensus 323 FeF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkI-vtlvEqEan 394 (531)
.+|... .+.+.. +..+ .=+|-|..-||++.+ .....+|+.+ +.|+|.- ++++|...+
T Consensus 217 v~~~~~---d~~~~~-----~~~~-~D~v~~~~~l~~~~~------~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 217 YHTIAG---SAFEVD-----YGND-YDLVLLPNFLHHFDV------ATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EEEEES---CTTTSC-----CCSC-EEEEEEESCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred eEEEec---ccccCC-----CCCC-CcEEEEcchhccCCH------HHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 566433 222211 1122 222333345788643 2355677766 5579976 566665543
No 13
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=94.57 E-value=0.29 Score=49.42 Aligned_cols=116 Identities=12% Similarity=0.019 Sum_probs=67.8
Q ss_pred HHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--E
Q 009607 246 NQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--F 323 (531)
Q Consensus 246 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--F 323 (531)
.+.|++.+.-.+.-.|+|+|.|.|. +...|+.+. |.+++|+++.| ..++...+++. ..+++ .
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~~----~~~~~~~v 242 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGD----ISAAMLKHF---PELDSTILNLP-----GAIDLVNENAA----EKGVADRM 242 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCH----HHHHHHHHC---TTCEEEEEECG-----GGHHHHHHHHH----HTTCTTTE
T ss_pred HHHHHHhcCCCCCCEEEEECCcccH----HHHHHHHHC---CCCeEEEEecH-----HHHHHHHHHHH----hcCCCCCE
Confidence 4577787765667799999999986 344444442 46799999873 34555554443 33442 5
Q ss_pred EEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEE-EEEecCC
Q 009607 324 TFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIM-TVVEQES 393 (531)
Q Consensus 324 eF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIv-tlvEqEa 393 (531)
+|..- ...+. .+..+++++.+. .||++.+ .....+|+.+ +.|+|.-. +++|.-.
T Consensus 243 ~~~~~---d~~~~-----~~~~~D~v~~~~--vlh~~~d------~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 243 RGIAV---DIYKE-----SYPEADAVLFCR--ILYSANE------QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp EEEEC---CTTTS-----CCCCCSEEEEES--CGGGSCH------HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred EEEeC---ccccC-----CCCCCCEEEEec--hhccCCH------HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 66432 22221 122335555554 4677643 3356777766 55799754 4666443
No 14
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=94.52 E-value=0.17 Score=50.69 Aligned_cols=116 Identities=16% Similarity=0.132 Sum_probs=65.5
Q ss_pred HHHhhhCCCc-eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eEE
Q 009607 248 AILEAFDGHD-CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RFT 324 (531)
Q Consensus 248 AILEA~~g~~-~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pFe 324 (531)
.|++.+.-.+ ..+|+|+|.|.|. +...|+.+. |.+++|+++.| ..++...+++ +..++ ..+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~----~~~~~~~~v~ 232 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLP-----TTRDAARKTI----HAHDLGGRVE 232 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECG-----GGHHHHHHHH----HHTTCGGGEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECH-----HHHHHHHHHH----HhcCCCCceE
Confidence 6777776555 7899999999986 445555442 45899999874 2455444433 33444 356
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEE-EEEecC
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIM-TVVEQE 392 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIv-tlvEqE 392 (531)
|..-. +.+... . . ++.+=+|-|..-||++.+ .....+|+.+ +.|+|.-. +++|.-
T Consensus 233 ~~~~d---~~~~~~--~-~-~~~~D~v~~~~vlh~~~~------~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 233 FFEKN---LLDARN--F-E-GGAADVVMLNDCLHYFDA------REAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp EEECC---TTCGGG--G-T-TCCEEEEEEESCGGGSCH------HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEeCC---cccCcc--c-C-CCCccEEEEecccccCCH------HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 64332 222110 0 1 222223333445788744 3356778766 56799754 455543
No 15
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=94.36 E-value=0.16 Score=51.94 Aligned_cols=117 Identities=20% Similarity=0.203 Sum_probs=67.0
Q ss_pred HHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eE
Q 009607 246 NQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RF 323 (531)
Q Consensus 246 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pF 323 (531)
...|++.+.-.+..+|+|+|.+.|. +...|+.+ -|.+++|+++.| ..++...+++. ..++ ..
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~---~p~~~~~~~D~~-----~~~~~a~~~~~----~~~l~~~v 254 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDA---FPGLRGTLLERP-----PVAEEARELLT----GRGLADRC 254 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHH---CTTCEEEEEECH-----HHHHHHHHHHH----HTTCTTTE
T ss_pred HHHHHHhCCCccCcEEEEeCCCccH----HHHHHHHH---CCCCeEEEEcCH-----HHHHHHHHhhh----hcCcCCce
Confidence 3567888776677899999999995 44555544 256799999763 34555554443 3343 35
Q ss_pred EEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHH-hcCCcEE-EEEecCCC
Q 009607 324 TFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIR-NLNPKIM-TVVEQESN 394 (531)
Q Consensus 324 eF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir-~L~PkIv-tlvEqEan 394 (531)
+|..... .+.+ + . .-++++.+.+ ||++.+ .....+|+.++ .|+|.-. +++|.-..
T Consensus 255 ~~~~~d~--~~~~-p----~-~~D~v~~~~v--lh~~~d------~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 255 EILPGDF--FETI-P----D-GADVYLIKHV--LHDWDD------DDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp EEEECCT--TTCC-C----S-SCSEEEEESC--GGGSCH------HHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred EEeccCC--CCCC-C----C-CceEEEhhhh--hccCCH------HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 5644321 1111 1 1 1245544443 587644 23446787774 5788644 55555443
No 16
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.33 E-value=0.17 Score=50.42 Aligned_cols=113 Identities=17% Similarity=0.097 Sum_probs=64.0
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eEEE
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RFTF 325 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pFeF 325 (531)
.|++.+.-.+..+|+|+|.+.| .+...|+.+. |.+++|+++.| ..++...+++. ..++ ..+|
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~~----~~~~~~~v~~ 223 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDLQ-----GPASAAHRRFL----DTGLSGRAQV 223 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECH-----HHHHHHHHHHH----HTTCTTTEEE
T ss_pred HHHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecCH-----HHHHHHHHhhh----hcCcCcCeEE
Confidence 4555555455679999999999 4455555542 55799999753 34555554443 3343 3566
Q ss_pred EEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEE-EEEecC
Q 009607 326 RGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIM-TVVEQE 392 (531)
Q Consensus 326 ~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIv-tlvEqE 392 (531)
..... .+.+. . .-+++..+. -||++.+ .....+|+.+ +.|+|.-. +++|.-
T Consensus 224 ~~~d~--~~~~p-----~-~~D~v~~~~--vlh~~~~------~~~~~~l~~~~~~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 224 VVGSF--FDPLP-----A-GAGGYVLSA--VLHDWDD------LSAVAILRRCAEAAGSGGVVLVIEAV 276 (332)
T ss_dssp EECCT--TSCCC-----C-SCSEEEEES--CGGGSCH------HHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred ecCCC--CCCCC-----C-CCcEEEEeh--hhccCCH------HHHHHHHHHHHHhcCCCCEEEEEeec
Confidence 54321 11111 1 123444443 4788654 2356778766 56799754 455543
No 17
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=94.23 E-value=0.36 Score=46.27 Aligned_cols=103 Identities=17% Similarity=0.116 Sum_probs=56.4
Q ss_pred CceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce-EEEEEeccCCcc
Q 009607 256 HDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR-FTFRGVAASRLE 334 (531)
Q Consensus 256 ~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp-FeF~~v~~~~le 334 (531)
.+.-+|+|+|.|.|. +...|+.+. |..++|||+... ..++...+ .++..+++ .+|... .+.
T Consensus 36 ~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~----~~~~~a~~----~~~~~~~~~~~~~~~---d~~ 97 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDISP----ESLEKARE----NTEKNGIKNVKFLQA---NIF 97 (276)
T ss_dssp CTTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESCH----HHHHHHHH----HHHHTTCCSEEEEEC---CGG
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECCH----HHHHHHHH----HHHHcCCCCcEEEEc---ccc
Confidence 345689999999884 344555542 345999998642 34444433 33344553 455322 222
Q ss_pred cccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 335 DVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 335 dl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
++. ..++..=+|-|...||++.+ .+.+|+.+ +-|+|.-++++
T Consensus 98 ~~~-----~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 98 SLP-----FEDSSFDHIFVCFVLEHLQS--------PEEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp GCC-----SCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred cCC-----CCCCCeeEEEEechhhhcCC--------HHHHHHHHHHHcCCCcEEEE
Confidence 222 22333333444445788744 34677666 56799865444
No 18
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=94.00 E-value=0.45 Score=43.82 Aligned_cols=163 Identities=16% Similarity=0.139 Sum_probs=81.8
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc------eEEEEEeccC
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI------RFTFRGVAAS 331 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv------pFeF~~v~~~ 331 (531)
.-.|+|+|.|.|. +...|+.+ | .++|||+... ..++.+ .+.++..++ ..+|...
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s~----~~~~~a----~~~~~~~~~~~~~~~~~~~~~~--- 90 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK--G---YSVTGIDINS----EAIRLA----ETAARSPGLNQKTGGKAEFKVE--- 90 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCH----HHHHHH----HHHTTCCSCCSSSSCEEEEEEC---
T ss_pred CCeEEEECCCCCH----HHHHHHhC--C---CeEEEEECCH----HHHHHH----HHHHHhcCCccccCcceEEEEe---
Confidence 3479999999885 44455555 2 3899998642 333332 233444555 3555432
Q ss_pred CcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEE-EEecCCCCCCcchHHHHHHHHH
Q 009607 332 RLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMT-VVEQESNHNQPEFLDRFTTALY 409 (531)
Q Consensus 332 ~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvt-lvEqEanhN~p~F~~RF~eAL~ 409 (531)
..+++. ...+..=+|-|...||++.+ +..+..+|+.+ +-|+|.-.+ +++...+...+.+..++...+
T Consensus 91 d~~~~~-----~~~~~~D~v~~~~~l~~~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~- 159 (235)
T 3sm3_A 91 NASSLS-----FHDSSFDFAVMQAFLTSVPD-----PKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDF- 159 (235)
T ss_dssp CTTSCC-----SCTTCEEEEEEESCGGGCCC-----HHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHH-
T ss_pred cccccC-----CCCCceeEEEEcchhhcCCC-----HHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhc-
Confidence 222221 22232223333345788754 23344677766 567997554 444444333332222221110
Q ss_pred HHHHHhhhhhcCCCCHHHHHHHHHHhhhhhhhhhc---cC-CCccccccchhhHHHHHhcCCceeccCC
Q 009607 410 YYSTMFDSLEACPLQPEKALAEIYLQREICNVVCC---EG-SARVERHEPLAKWRNRLAGAGFRPLHLG 474 (531)
Q Consensus 410 yYsalFDSLea~~~s~er~~~E~~lgreI~NiVAc---EG-~~RvERhE~~~~Wr~rm~~AGF~~vpls 474 (531)
..... -...... .| .....++-+.+.|+..|+.+||+.+.+.
T Consensus 160 ------~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 160 ------PITKE-----------------EGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp ------HHHCS-----------------TTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEE
T ss_pred ------cchhh-----------------hcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEE
Confidence 00000 0000000 00 0223455678899999999999988763
No 19
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=93.90 E-value=0.12 Score=52.66 Aligned_cols=117 Identities=14% Similarity=0.096 Sum_probs=63.4
Q ss_pred HHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eEEEE
Q 009607 249 ILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RFTFR 326 (531)
Q Consensus 249 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pFeF~ 326 (531)
+++.+...+.-+|+|+|.|.|. +...|+.+. |.+++|+++.| ..++...++ ++..++ ..+|.
T Consensus 171 ~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~----~~~~~~~~~v~~~ 234 (363)
T 3dp7_A 171 ALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDLP-----QQLEMMRKQ----TAGLSGSERIHGH 234 (363)
T ss_dssp HHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEECH-----HHHHHHHHH----HTTCTTGGGEEEE
T ss_pred HHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeCH-----HHHHHHHHH----HHhcCcccceEEE
Confidence 4444433455799999999985 444555442 55799999863 344444433 344454 35664
Q ss_pred EeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEE-EEEecCCC
Q 009607 327 GVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIM-TVVEQESN 394 (531)
Q Consensus 327 ~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIv-tlvEqEan 394 (531)
.-- ..+.+ ..+. ..-++++.+. -||++.+ .....+|+.+ +.|+|.-. +++|.-.+
T Consensus 235 ~~d---~~~~~-~~~p-~~~D~v~~~~--vlh~~~~------~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 235 GAN---LLDRD-VPFP-TGFDAVWMSQ--FLDCFSE------EEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp ECC---CCSSS-CCCC-CCCSEEEEES--CSTTSCH------HHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred Ecc---ccccC-CCCC-CCcCEEEEec--hhhhCCH------HHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 322 22111 0011 1224555544 4687654 3355678776 55899754 45564433
No 20
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=93.78 E-value=0.15 Score=48.20 Aligned_cols=123 Identities=14% Similarity=0.096 Sum_probs=64.8
Q ss_pred ChhhhHHHHHHHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHH
Q 009607 236 PYLKFAHFTANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAEL 315 (531)
Q Consensus 236 P~~kFahftANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~f 315 (531)
.++.-+....-..+++.+.-.+.-+|+|+|.|.|.- ...|+.+.+ .++|||+... ..++...+++...
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~----~~~l~~~~~----~~v~~vD~s~----~~~~~a~~~~~~~ 101 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLGGG----CMYINEKYG----AHTHGIDICS----NIVNMANERVSGN 101 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHH----HHHHHHHHC----CEEEEEESCH----HHHHHHHHTCCSC
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHH----HHHHHHHcC----CEEEEEeCCH----HHHHHHHHHhhcC
Confidence 344444445557788887666677999999998853 344444322 4999998642 2333222221111
Q ss_pred HHhCCceEEEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 316 ARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 316 A~~lgvpFeF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
-..+|... .+.++ ...++..=+|-|...|||+.. .....+|+.+ |-|+|.-.+++
T Consensus 102 -----~~~~~~~~---d~~~~-----~~~~~~fD~v~~~~~l~~~~~------~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 102 -----NKIIFEAN---DILTK-----EFPENNFDLIYSRDAILALSL------ENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp -----TTEEEEEC---CTTTC-----CCCTTCEEEEEEESCGGGSCH------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred -----CCeEEEEC---ccccC-----CCCCCcEEEEeHHHHHHhcCh------HHHHHHHHHHHHHcCCCCEEEE
Confidence 23444322 22222 122332323334445788732 3356677655 56799755443
No 21
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=93.54 E-value=1.7 Score=40.78 Aligned_cols=111 Identities=9% Similarity=0.064 Sum_probs=62.0
Q ss_pred HHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce-EE
Q 009607 246 NQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR-FT 324 (531)
Q Consensus 246 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp-Fe 324 (531)
+.-+++.+.-.+.-+|+|+|.|.|. +...|+.+. + ++|||+... ..++...+++ +..+++ ++
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s~----~~~~~a~~~~----~~~~~~~v~ 72 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDATK----EMVEVASSFA----QEKGVENVR 72 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESCH----HHHHHHHHHH----HHHTCCSEE
T ss_pred cchHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECCH----HHHHHHHHHH----HHcCCCCeE
Confidence 3445666666667789999999885 445566552 2 899998642 4454444433 333443 55
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
|... .++++. ..++..=+|-|...+||+.+ ...+|+.+ |-|+|.-.+++
T Consensus 73 ~~~~---d~~~~~-----~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 73 FQQG---TAESLP-----FPDDSFDIITCRYAAHHFSD--------VRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp EEEC---BTTBCC-----SCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEec---ccccCC-----CCCCcEEEEEECCchhhccC--------HHHHHHHHHHHcCCCcEEEE
Confidence 5422 233322 22333333334455788643 34566555 66899865544
No 22
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=93.35 E-value=0.52 Score=45.06 Aligned_cols=125 Identities=16% Similarity=0.018 Sum_probs=67.6
Q ss_pred HhhCChhhhHHHHHHHHHHhhhC-CCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHH
Q 009607 232 YEACPYLKFAHFTANQAILEAFD-GHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGL 310 (531)
Q Consensus 232 ~e~~P~~kFahftANqAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~ 310 (531)
|+..+...-.+...-..+++.+. -.+.-+|+|+|.|.|. +...|+.+ |..++|||+... ..++.+.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~----~~~~la~~----~~~~v~gvD~s~----~~~~~a~~ 87 (267)
T 3kkz_A 20 FSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTGG----QTMVLAGH----VTGQVTGLDFLS----GFIDIFNR 87 (267)
T ss_dssp HHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCH----HHHHHHTT----CSSEEEEEESCH----HHHHHHHH
T ss_pred HhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCH----HHHHHHhc----cCCEEEEEeCCH----HHHHHHHH
Confidence 33333333333333444555555 2345689999998873 55667766 335999998642 34444443
Q ss_pred HHHHHHHhCCce--EEEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEE
Q 009607 311 RLAELARSVNIR--FTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMT 387 (531)
Q Consensus 311 rL~~fA~~lgvp--FeF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvt 387 (531)
.++..|++ .+|... .++++. ...+..=+|-|...+||+ + .+.+|+.+ +-|+|.-++
T Consensus 88 ----~~~~~~~~~~v~~~~~---d~~~~~-----~~~~~fD~i~~~~~~~~~-~--------~~~~l~~~~~~LkpgG~l 146 (267)
T 3kkz_A 88 ----NARQSGLQNRVTGIVG---SMDDLP-----FRNEELDLIWSEGAIYNI-G--------FERGLNEWRKYLKKGGYL 146 (267)
T ss_dssp ----HHHHTTCTTTEEEEEC---CTTSCC-----CCTTCEEEEEESSCGGGT-C--------HHHHHHHHGGGEEEEEEE
T ss_pred ----HHHHcCCCcCcEEEEc---ChhhCC-----CCCCCEEEEEEcCCceec-C--------HHHHHHHHHHHcCCCCEE
Confidence 34455664 666432 233332 223323333344446776 3 45677666 557997654
Q ss_pred EE
Q 009607 388 VV 389 (531)
Q Consensus 388 lv 389 (531)
++
T Consensus 147 ~~ 148 (267)
T 3kkz_A 147 AV 148 (267)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 23
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=93.32 E-value=1 Score=42.33 Aligned_cols=127 Identities=16% Similarity=0.060 Sum_probs=66.2
Q ss_pred HHhhCChhhhHHHHHHHHHHhhhCC-CceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHH
Q 009607 231 FYEACPYLKFAHFTANQAILEAFDG-HDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIG 309 (531)
Q Consensus 231 f~e~~P~~kFahftANqAILEA~~g-~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG 309 (531)
+|+..+-..-.+...-..+++.+.+ .+.-+|+|+|.|.|.. ...|+.+.+ . ++|||+... ..++.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~----~~~l~~~~~---~-~v~~vD~s~----~~~~~a~ 86 (257)
T 3f4k_A 19 YFKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGGQ----TLFLADYVK---G-QITGIDLFP----DFIEIFN 86 (257)
T ss_dssp HHTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHH----HHHHHHHCC---S-EEEEEESCH----HHHHHHH
T ss_pred HHcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHH----HHHHHHhCC---C-eEEEEECCH----HHHHHHH
Confidence 3444443333333444445666543 3345899999998853 344454432 2 999998642 3444443
Q ss_pred HHHHHHHHhCCce--EEEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEE
Q 009607 310 LRLAELARSVNIR--FTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIM 386 (531)
Q Consensus 310 ~rL~~fA~~lgvp--FeF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIv 386 (531)
+.++..|++ .+|..- .++++. ..++..=+|-|...|||+ + .+.+|+.+ +-|+|.-.
T Consensus 87 ----~~~~~~~~~~~~~~~~~---d~~~~~-----~~~~~fD~v~~~~~l~~~-~--------~~~~l~~~~~~L~pgG~ 145 (257)
T 3f4k_A 87 ----ENAVKANCADRVKGITG---SMDNLP-----FQNEELDLIWSEGAIYNI-G--------FERGMNEWSKYLKKGGF 145 (257)
T ss_dssp ----HHHHHTTCTTTEEEEEC---CTTSCS-----SCTTCEEEEEEESCSCCC-C--------HHHHHHHHHTTEEEEEE
T ss_pred ----HHHHHcCCCCceEEEEC---ChhhCC-----CCCCCEEEEEecChHhhc-C--------HHHHHHHHHHHcCCCcE
Confidence 334555665 566432 233332 223322233333346765 2 45677666 55799765
Q ss_pred EEEe
Q 009607 387 TVVE 390 (531)
Q Consensus 387 tlvE 390 (531)
+++.
T Consensus 146 l~~~ 149 (257)
T 3f4k_A 146 IAVS 149 (257)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 24
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=92.83 E-value=0.53 Score=45.42 Aligned_cols=123 Identities=19% Similarity=0.186 Sum_probs=62.6
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEE
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRG 327 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~ 327 (531)
.+++.+.-.+.-.|+|+|.|.|.-. ..|+. ++ .++|||+... ..++...+++ -++.|.-
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~----~~l~~-~~----~~v~gvD~s~----~~~~~a~~~~------~~~~~~~-- 106 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLT----EKIAQ-SG----AEVLGTDNAA----TMIEKARQNY------PHLHFDV-- 106 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHH----HHHHH-TT----CEEEEEESCH----HHHHHHHHHC------TTSCEEE--
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHH----HHHHh-CC----CeEEEEECCH----HHHHHHHhhC------CCCEEEE--
Confidence 3555555455568999999988643 34443 22 4999998642 3344333322 2444332
Q ss_pred eccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCcchHHHHHH
Q 009607 328 VAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQESNHNQPEFLDRFTT 406 (531)
Q Consensus 328 v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqEanhN~p~F~~RF~e 406 (531)
. ..+++. . ++..=+|-|...||++.+ .+.+|+.+ |-|+|.-.+++..-...+...+...+.+
T Consensus 107 ~---d~~~~~-----~-~~~fD~v~~~~~l~~~~d--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 169 (279)
T 3ccf_A 107 A---DARNFR-----V-DKPLDAVFSNAMLHWVKE--------PEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYN 169 (279)
T ss_dssp C---CTTTCC-----C-SSCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHH
T ss_pred C---ChhhCC-----c-CCCcCEEEEcchhhhCcC--------HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHH
Confidence 1 223322 1 222222333445788643 34566555 6689986655543332232344444444
Q ss_pred HH
Q 009607 407 AL 408 (531)
Q Consensus 407 AL 408 (531)
.+
T Consensus 170 ~~ 171 (279)
T 3ccf_A 170 AL 171 (279)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 25
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=92.81 E-value=0.67 Score=47.51 Aligned_cols=110 Identities=12% Similarity=0.007 Sum_probs=61.6
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhC-C----ceEEEEEeccC
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSV-N----IRFTFRGVAAS 331 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~l-g----vpFeF~~v~~~ 331 (531)
+.-+|+|+|.|.|.-=..|.+.+ .|..++|||+.. ...++.+.+++.+.+... | -..+|..-
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~s----~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~--- 149 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDML----DNQLEVARKYVEYHAEKFFGSPSRSNVRFLKG--- 149 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEECC----HHHHHHHHHTHHHHHHHHHSSTTCCCEEEEES---
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEECC----HHHHHHHHHHHHHhhhhcccccCCCceEEEEc---
Confidence 34589999999985333333322 133599999874 356777777777766553 3 34555433
Q ss_pred Cccccccc-ccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 332 RLEDVKPW-MLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 332 ~ledl~~~-~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
.++++... ...+.++ +.|+.|.+ ||++.+ ...+|+.+ |-|+|.-.+++
T Consensus 150 d~~~l~~~~~~~~~~~~fD~V~~~~~--l~~~~d--------~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 150 FIENLATAEPEGVPDSSVDIVISNCV--CNLSTN--------KLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp CTTCGGGCBSCCCCTTCEEEEEEESC--GGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred cHHHhhhcccCCCCCCCEEEEEEccc--hhcCCC--------HHHHHHHHHHHcCCCCEEEE
Confidence 23332110 0022233 45555554 677543 45666655 66899865444
No 26
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=92.72 E-value=0.27 Score=49.59 Aligned_cols=110 Identities=14% Similarity=0.055 Sum_probs=60.9
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eEE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RFT 324 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pFe 324 (531)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+. |.+++|+++.|. .+. . +.++..++ ..+
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-----~~~--~----~~~~~~~~~~~v~ 235 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGG----FLLTVLREH---PGLQGVLLDRAE-----VVA--R----HRLDAPDVAGRWK 235 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSH----HHHHHHHHC---TTEEEEEEECHH-----HHT--T----CCCCCGGGTTSEE
T ss_pred HHHHHhCCccCCceEEEECCccCH----HHHHHHHHC---CCCEEEEecCHH-----Hhh--c----ccccccCCCCCeE
Confidence 467777766677899999999985 344454442 568999998642 111 1 11111122 255
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEE-EEEec
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIM-TVVEQ 391 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIv-tlvEq 391 (531)
|..-.. .+.+ . .-++++.+. -||++.+ .....+|+.+ +.|+|.-. +++|.
T Consensus 236 ~~~~d~--~~~~-----p--~~D~v~~~~--vlh~~~d------~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 236 VVEGDF--LREV-----P--HADVHVLKR--ILHNWGD------EDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EEECCT--TTCC-----C--CCSEEEEES--CGGGSCH------HHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred EEecCC--CCCC-----C--CCcEEEEeh--hccCCCH------HHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 543221 1111 1 224555544 4688654 2345778766 56799744 45554
No 27
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=92.48 E-value=0.25 Score=56.85 Aligned_cols=120 Identities=13% Similarity=0.135 Sum_probs=71.8
Q ss_pred HHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHH--HhCCc-eEEE
Q 009607 249 ILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELA--RSVNI-RFTF 325 (531)
Q Consensus 249 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA--~~lgv-pFeF 325 (531)
|++.+...+.-.|+|+|.|.| .+...|+.+ ++|.-++|||+.. ...++...++|.... +..++ ..+|
T Consensus 713 LLelL~~~~g~rVLDVGCGTG----~lai~LAr~--g~p~a~VtGVDIS----~emLe~AReRLa~~lnAkr~gl~nVef 782 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSG----SLLDSLLDY--PTSLQTIIGVDIS----PKGLARAAKMLHVKLNKEACNVKSATL 782 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSS----HHHHHHTSS--CCCCCEEEEEESC----HHHHHHHHHHHHHHTTTTCSSCSEEEE
T ss_pred HHHHhcccCCCEEEEECCCCC----HHHHHHHHh--CCCCCeEEEEECC----HHHHHHHHHHhhhccchhhcCCCceEE
Confidence 444444334557999999998 355666655 4566799999875 356777777776542 23344 3444
Q ss_pred EEeccCCcccccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHH-HHhcCCcEEEEEecCCC
Q 009607 326 RGVAASRLEDVKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGW-IRNLNPKIMTVVEQESN 394 (531)
Q Consensus 326 ~~v~~~~ledl~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~-Ir~L~PkIvtlvEqEan 394 (531)
. .. .+.++.. ..+ ++|+.+ ..|||+.+ .....+|+. .+-|+|.++++...+.+
T Consensus 783 i--qG-Da~dLp~-----~d~sFDlVV~~--eVLeHL~d------p~l~~~L~eI~RvLKPG~LIISTPN~e 838 (950)
T 3htx_A 783 Y--DG-SILEFDS-----RLHDVDIGTCL--EVIEHMEE------DQACEFGEKVLSLFHPKLLIVSTPNYE 838 (950)
T ss_dssp E--ES-CTTSCCT-----TSCSCCEEEEE--SCGGGSCH------HHHHHHHHHHHHTTCCSEEEEEECBGG
T ss_pred E--EC-chHhCCc-----ccCCeeEEEEe--CchhhCCh------HHHHHHHHHHHHHcCCCEEEEEecCch
Confidence 3 22 3444332 223 444444 45788754 334567765 57789997777666543
No 28
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=92.34 E-value=0.79 Score=45.96 Aligned_cols=114 Identities=18% Similarity=0.189 Sum_probs=63.6
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eEE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RFT 324 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pFe 324 (531)
+.|++.+.-.+.-+|+|+|.|.|. +...|+.+. |.+++|+++.| ..++...+++. ..++ ..+
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~~-----~~~~~a~~~~~----~~~~~~~v~ 236 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGG----FAAAIARRA---PHVSATVLEMA-----GTVDTARSYLK----DEGLSDRVD 236 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECT-----THHHHHHHHHH----HTTCTTTEE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcH----HHHHHHHhC---CCCEEEEecCH-----HHHHHHHHHHH----hcCCCCceE
Confidence 567777765666799999999985 344444442 45799999863 34555554443 3444 356
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcE-EEEEecC
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKI-MTVVEQE 392 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkI-vtlvEqE 392 (531)
|..-.. .+.+.. .-+.++.+ .-||++.+ .....+|+.+ +.|+|.- ++++|..
T Consensus 237 ~~~~d~--~~~~~~------~~D~v~~~--~vl~~~~~------~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 237 VVEGDF--FEPLPR------KADAIILS--FVLLNWPD------HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEECCT--TSCCSS------CEEEEEEE--SCGGGSCH------HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEeCCC--CCCCCC------CccEEEEc--ccccCCCH------HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 643211 121110 01333333 34777643 2234677666 5579976 4555654
No 29
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=91.58 E-value=0.53 Score=42.78 Aligned_cols=98 Identities=15% Similarity=0.112 Sum_probs=53.2
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
.-.|+|+|.|.|. +...|+.+ | .++|||+... ..++...++ .-..+|.. . .++++
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~----~~~~~a~~~--------~~~~~~~~--~-d~~~~- 96 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPAT----RLVELARQT--------HPSVTFHH--G-TITDL- 96 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCCH----HHHHHHHHH--------CTTSEEEC--C-CGGGG-
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCCH----HHHHHHHHh--------CCCCeEEe--C-ccccc-
Confidence 4579999999986 55566666 2 2899998642 334333322 11233321 1 23332
Q ss_pred ccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 338 PWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 338 ~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
...++..=+|-|...|||+.. .....+|+.+ +.|+|.-.+++.
T Consensus 97 ----~~~~~~fD~v~~~~~l~~~~~------~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 97 ----SDSPKRWAGLLAWYSLIHMGP------GELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp ----GGSCCCEEEEEEESSSTTCCT------TTHHHHHHHHHHTEEEEEEEEEE
T ss_pred ----ccCCCCeEEEEehhhHhcCCH------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 222332223333446788753 3456677655 667997665543
No 30
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=91.58 E-value=1.7 Score=42.75 Aligned_cols=110 Identities=15% Similarity=0.025 Sum_probs=60.4
Q ss_pred HHHHhhhC-CCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--E
Q 009607 247 QAILEAFD-GHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--F 323 (531)
Q Consensus 247 qAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--F 323 (531)
+.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++|||+... ..++.+.+ .++..|++ .
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~----~~~~~a~~----~~~~~~~~~~v 169 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTLSA----AQADFGNR----RARELRIDDHV 169 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCH----HHHHHHHH----HHHHTTCTTTE
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeCCH----HHHHHHHH----HHHHcCCCCce
Confidence 45777776 3445689999999884 3444554432 4899998642 34444443 34455654 6
Q ss_pred EEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 324 TFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 324 eF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
+|..- .++++. ...+..=+|-|...|||+ + ...+|+.+ |-|+|.-.+++
T Consensus 170 ~~~~~---d~~~~~-----~~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 170 RSRVC---NMLDTP-----FDKGAVTASWNNESTMYV-D--------LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEEEC---CTTSCC-----CCTTCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEC---ChhcCC-----CCCCCEeEEEECCchhhC-C--------HHHHHHHHHHHcCCCcEEEE
Confidence 66432 233322 222322222233446775 2 55666655 66899765443
No 31
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=91.49 E-value=1.1 Score=42.52 Aligned_cols=110 Identities=21% Similarity=0.197 Sum_probs=60.1
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FT 324 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--Fe 324 (531)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|||+... ..++...++ ++..|++ .+
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvD~s~----~~~~~a~~~----~~~~~~~~~~~ 114 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGK----PAVRLATARD----VRVTGISISR----PQVNQANAR----ATAAGLANRVT 114 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSH----HHHHHHHHSC----CEEEEEESCH----HHHHHHHHH----HHHTTCTTTEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHhcC----CEEEEEeCCH----HHHHHHHHH----HHhcCCCcceE
Confidence 445666655556699999999875 3344554433 4999998642 344444333 3444543 55
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEE
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTV 388 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtl 388 (531)
|... ..+++. ..++..=+|-|...|||+.+ ...+|+.+ +-|+|.-.++
T Consensus 115 ~~~~---d~~~~~-----~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~ 163 (273)
T 3bus_A 115 FSYA---DAMDLP-----FEDASFDAVWALESLHHMPD--------RGRALREMARVLRPGGTVA 163 (273)
T ss_dssp EEEC---CTTSCC-----SCTTCEEEEEEESCTTTSSC--------HHHHHHHHHTTEEEEEEEE
T ss_pred EEEC---ccccCC-----CCCCCccEEEEechhhhCCC--------HHHHHHHHHHHcCCCeEEE
Confidence 5432 223321 22332223333445677643 35677766 5579985443
No 32
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=91.06 E-value=0.39 Score=44.18 Aligned_cols=108 Identities=18% Similarity=0.223 Sum_probs=57.9
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFR 326 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~ 326 (531)
..+++.+...+.-.|+|+|.|.|. +...|+.+ + .++|||+... ..++...+++. -++. |.
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s~----~~~~~a~~~~~-----~~~~--~~ 94 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA-G----RTVYGIEPSR----EMRMIAKEKLP-----KEFS--IT 94 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT-T----CEEEEECSCH----HHHHHHHHHSC-----TTCC--EE
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC-C----CeEEEEeCCH----HHHHHHHHhCC-----CceE--EE
Confidence 456666655566789999999984 55556665 2 4899998642 33333332221 1333 32
Q ss_pred EeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 327 GVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 327 ~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
. ..++++.. . ..=+.|+.+ ..|||+.+ .....+|+.+ +.|+|.-.+++
T Consensus 95 ~---~d~~~~~~---~-~~fD~v~~~--~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 95 E---GDFLSFEV---P-TSIDTIVST--YAFHHLTD------DEKNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp S---CCSSSCCC---C-SCCSEEEEE--SCGGGSCH------HHHHHHHHHHHHHSCTTCEEEE
T ss_pred e---CChhhcCC---C-CCeEEEEEC--cchhcCCh------HHHHHHHHHHHHhcCCCCEEEE
Confidence 1 12333221 1 122455555 34788744 2223366655 66799755444
No 33
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=91.02 E-value=0.57 Score=47.82 Aligned_cols=110 Identities=16% Similarity=0.132 Sum_probs=61.8
Q ss_pred HHHHHhhhC-CCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEE
Q 009607 246 NQAILEAFD-GHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFT 324 (531)
Q Consensus 246 NqAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFe 324 (531)
...|++.+. -.+.-+|+|+|.|.|. +...|+.+- |.+++|+++.|. .++ .|+.. -..+
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-----~~~--------~a~~~-~~v~ 249 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDLPH-----VIQ--------DAPAF-SGVE 249 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHH-----HHT--------TCCCC-TTEE
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEehHH-----HHH--------hhhhc-CCCE
Confidence 355777776 3456799999999985 444455442 567999998641 221 12221 1244
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcE-EEEEecCC
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKI-MTVVEQES 393 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkI-vtlvEqEa 393 (531)
|..- ...+ + + ..+++++.+.+ ||++.+ .....+|+.+ +.|+|.- ++++|.-.
T Consensus 250 ~~~~---d~~~--~--~--p~~D~v~~~~v--lh~~~~------~~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 250 HLGG---DMFD--G--V--PKGDAIFIKWI--CHDWSD------EHCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp EEEC---CTTT--C--C--CCCSEEEEESC--GGGBCH------HHHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred EEec---CCCC--C--C--CCCCEEEEech--hhcCCH------HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 4322 1211 1 1 12356555554 788755 3455678776 5689975 45656443
No 34
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=90.93 E-value=0.46 Score=44.62 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=60.9
Q ss_pred HHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEE
Q 009607 246 NQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTF 325 (531)
Q Consensus 246 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF 325 (531)
...+++.+...+.-+|+|+|.|.|.--..|.+.. ..++|||+... ..++.+.+++.+. -..+|
T Consensus 82 ~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--------~~~v~~vD~s~----~~~~~a~~~~~~~-----~~~~~ 144 (254)
T 1xtp_A 82 SRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL--------YATTDLLEPVK----HMLEEAKRELAGM-----PVGKF 144 (254)
T ss_dssp HHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--------CSEEEEEESCH----HHHHHHHHHTTTS-----SEEEE
T ss_pred HHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--------cCEEEEEeCCH----HHHHHHHHHhccC-----CceEE
Confidence 3567777766667799999999986333333322 23899998642 3444443332221 23444
Q ss_pred EEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 326 RGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 326 ~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
... .++++. ..++..=+|-|...|||+.+ .....+|+.+ +.|+|.-++++.
T Consensus 145 ~~~---d~~~~~-----~~~~~fD~v~~~~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 145 ILA---SMETAT-----LPPNTYDLIVIQWTAIYLTD------ADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp EES---CGGGCC-----CCSSCEEEEEEESCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEc---cHHHCC-----CCCCCeEEEEEcchhhhCCH------HHHHHHHHHHHHhcCCCeEEEEE
Confidence 322 233322 22232222223345788743 2355666655 668997665544
No 35
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=90.78 E-value=4.3 Score=38.98 Aligned_cols=109 Identities=16% Similarity=0.104 Sum_probs=59.6
Q ss_pred HHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EEEE
Q 009607 249 ILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FTFR 326 (531)
Q Consensus 249 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--FeF~ 326 (531)
+++.+... .-+|+|+|.|.|. +...|+.+ + .++|||+... ..++.+.++ ++..|++ .+|.
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~----~~~~~a~~~----~~~~~~~~~v~~~ 122 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQ----TAIKMAER-G----HQVILCDLSA----QMIDRAKQA----AEAKGVSDNMQFI 122 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCH----HHHHHHHHH----HHC-CCGGGEEEE
T ss_pred HHHhcCCC-CCEEEEeCCcchH----HHHHHHHC-C----CEEEEEECCH----HHHHHHHHH----HHhcCCCcceEEE
Confidence 44544433 5689999999983 55566666 2 3899998642 344444433 3444553 5554
Q ss_pred EeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 327 GVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 327 ~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
.. .++++.. ..++..=+|-|...|||+.+ + ..+|+.+ +-|+|.-++++.
T Consensus 123 ~~---d~~~~~~----~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 123 HC---AAQDVAS----HLETPVDLILFHAVLEWVAD-------P-RSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp ES---CGGGTGG----GCSSCEEEEEEESCGGGCSC-------H-HHHHHHHHHTEEEEEEEEEE
T ss_pred Ec---CHHHhhh----hcCCCceEEEECchhhcccC-------H-HHHHHHHHHHcCCCeEEEEE
Confidence 32 2333221 11232223333445788643 3 4566655 668998776554
No 36
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=90.39 E-value=0.67 Score=47.28 Aligned_cols=109 Identities=16% Similarity=0.136 Sum_probs=61.0
Q ss_pred HHHHHhhhC-CCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEE
Q 009607 246 NQAILEAFD-GHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFT 324 (531)
Q Consensus 246 NqAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFe 324 (531)
...|++.+. -...-+|+|+|.|.|.- ...|+.+. |.+++|+++.|. .++ .|+.. -..+
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~-----~~~--------~a~~~-~~v~ 247 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGAT----VAAIAAHY---PTIKGVNFDLPH-----VIS--------EAPQF-PGVT 247 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEECHH-----HHT--------TCCCC-TTEE
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHH----HHHHHHHC---CCCeEEEecCHH-----HHH--------hhhhc-CCeE
Confidence 356777776 34567999999999853 44444442 567999998642 221 12221 1244
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcE-EEEEecC
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKI-MTVVEQE 392 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkI-vtlvEqE 392 (531)
|..- ...+ + + ..++++.... -||++.+ .....+|+.+ +.|+|.- ++++|.-
T Consensus 248 ~~~~---D~~~--~--~--p~~D~v~~~~--vlh~~~d------~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 248 HVGG---DMFK--E--V--PSGDTILMKW--ILHDWSD------QHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp EEEC---CTTT--C--C--CCCSEEEEES--CGGGSCH------HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEeC---CcCC--C--C--CCCCEEEehH--HhccCCH------HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 4332 1211 1 1 1235555444 4788754 3456778777 5589965 4555543
No 37
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=89.83 E-value=3.1 Score=38.55 Aligned_cols=98 Identities=16% Similarity=0.101 Sum_probs=51.8
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
.-+|+|+|.|.|. +...|+.+ + .++|||+... ..++...++. . ....+|... .++++.
T Consensus 54 ~~~vLDiG~G~G~----~~~~l~~~-~----~~v~~vD~s~----~~~~~a~~~~----~--~~~~~~~~~---d~~~~~ 111 (242)
T 3l8d_A 54 EAEVLDVGCGDGY----GTYKLSRT-G----YKAVGVDISE----VMIQKGKERG----E--GPDLSFIKG---DLSSLP 111 (242)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCH----HHHHHHHTTT----C--BTTEEEEEC---BTTBCS
T ss_pred CCeEEEEcCCCCH----HHHHHHHc-C----CeEEEEECCH----HHHHHHHhhc----c--cCCceEEEc---chhcCC
Confidence 3489999999885 45556655 2 3899998642 3333322221 1 233444332 222221
Q ss_pred ccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHH-HHhcCCcEEEEEe
Q 009607 338 PWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGW-IRNLNPKIMTVVE 390 (531)
Q Consensus 338 ~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~-Ir~L~PkIvtlvE 390 (531)
..++..=+|-|...|||+.+ + ..+|+. .+.|+|.-++++.
T Consensus 112 -----~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 112 -----FENEQFEAIMAINSLEWTEE-------P-LRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp -----SCTTCEEEEEEESCTTSSSC-------H-HHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCCCccEEEEcChHhhccC-------H-HHHHHHHHHHhCCCeEEEEE
Confidence 22333333334455787633 3 455654 4678997665544
No 38
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=89.55 E-value=1.1 Score=41.09 Aligned_cols=96 Identities=16% Similarity=0.131 Sum_probs=54.0
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
.-.|+|+|.|.|. +...|+.+ + .++|||+... ..++...+++ ++.|.-. .++++.
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s~----~~~~~a~~~~-------~~~~~~~-----d~~~~~ 98 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA-G----FDVDATDGSP----ELAAEASRRL-------GRPVRTM-----LFHQLD 98 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT-T----CEEEEEESCH----HHHHHHHHHH-------TSCCEEC-----CGGGCC
T ss_pred CCcEEEECCCCCH----HHHHHHHc-C----CeEEEECCCH----HHHHHHHHhc-------CCceEEe-----eeccCC
Confidence 3479999999885 45556655 2 3899998642 3444444433 5544321 222222
Q ss_pred ccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 338 PWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 338 ~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
.++..=+|-|...|||+.. .....+|+.+ +.|+|.-++++.
T Consensus 99 ------~~~~fD~v~~~~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 99 ------AIDAYDAVWAHACLLHVPR------DELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp ------CCSCEEEEEECSCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCCcEEEEEecCchhhcCH------HHHHHHHHHHHHhcCCCcEEEEE
Confidence 1222222333445788742 3456677666 567998776654
No 39
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=87.66 E-value=12 Score=36.40 Aligned_cols=111 Identities=10% Similarity=0.052 Sum_probs=60.7
Q ss_pred HHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--E
Q 009607 246 NQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--F 323 (531)
Q Consensus 246 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--F 323 (531)
-+.|++.+.-.+.-+|+|+|.|.|. +...|+.+.| .++|||+... ..++...++ ++..|+. .
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~----~~~~~a~~~----~~~~~~~~~v 142 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTLSK----NQHARCEQV----LASIDTNRSR 142 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCH----HHHHHHHHH----HHTSCCSSCE
T ss_pred HHHHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEECCH----HHHHHHHHH----HHhcCCCCce
Confidence 3456666655566689999998874 3344454432 2999998642 344444333 3344543 4
Q ss_pred EEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 324 TFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 324 eF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
+|... .++++. ..=+.|+.+. .|||+.. .....+|+.+ +-|+|.-.+++
T Consensus 143 ~~~~~---d~~~~~------~~fD~v~~~~--~l~~~~~------~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 143 QVLLQ---GWEDFA------EPVDRIVSIE--AFEHFGH------ENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EEEES---CGGGCC------CCCSEEEEES--CGGGTCG------GGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEEC---ChHHCC------CCcCEEEEeC--hHHhcCH------HHHHHHHHHHHHhcCCCcEEEE
Confidence 55322 333332 1113444443 4788743 3356677655 66899755443
No 40
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=87.63 E-value=1.3 Score=44.52 Aligned_cols=33 Identities=15% Similarity=0.077 Sum_probs=23.9
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCC
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGP 296 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~ 296 (531)
+.-+|+|+|.|.|. +...|+.+. |.+++|+++.
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 220 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR 220 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC
Confidence 34589999999984 455555542 4579999986
No 41
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=86.76 E-value=2.8 Score=39.25 Aligned_cols=105 Identities=19% Similarity=0.154 Sum_probs=58.1
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEE
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRG 327 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~ 327 (531)
.+++.+...+.-+|+|+|.|.|.--..|.+.+ |..++|||+... ..++...++ .-++ +|..
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s~----~~~~~a~~~------~~~~--~~~~ 84 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSDD----DMLEKAADR------LPNT--NFGK 84 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESCH----HHHHHHHHH------STTS--EEEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECCH----HHHHHHHHh------CCCc--EEEE
Confidence 46666655556689999999987555554443 224899998642 334333332 1233 3432
Q ss_pred eccCCcccccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 328 VAASRLEDVKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 328 v~~~~ledl~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
. ..+++. .++ +.|+.+ ..||++.+ ...+|+.+ +-|+|.-.+++.
T Consensus 85 ~---d~~~~~------~~~~fD~v~~~--~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 85 A---DLATWK------PAQKADLLYAN--AVFQWVPD--------HLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp C---CTTTCC------CSSCEEEEEEE--SCGGGSTT--------HHHHHHHHGGGEEEEEEEEEE
T ss_pred C---ChhhcC------ccCCcCEEEEe--CchhhCCC--------HHHHHHHHHHhcCCCeEEEEE
Confidence 2 223322 122 344444 45787633 45677666 668998655444
No 42
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=86.63 E-value=2.8 Score=39.35 Aligned_cols=113 Identities=17% Similarity=0.179 Sum_probs=63.4
Q ss_pred HHHHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceE
Q 009607 244 TANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRF 323 (531)
Q Consensus 244 tANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpF 323 (531)
..-+.|++.+...+.-.|+|+|.|.|. +...|+.+ |+. ++|||+... ..++.+.+++. +-..
T Consensus 31 ~~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~~--~v~~vD~s~----~~~~~a~~~~~------~~~~ 92 (253)
T 3g5l_A 31 GEWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GAK--KVLGIDLSE----RMLTEAKRKTT------SPVV 92 (253)
T ss_dssp HHHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEESCH----HHHHHHHHHCC------CTTE
T ss_pred hhHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CCC--EEEEEECCH----HHHHHHHHhhc------cCCe
Confidence 344567777766667789999999984 55556655 222 899998642 33443333222 2334
Q ss_pred EEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 324 TFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 324 eF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
+|... .++++. ...+..=+|-|...|||+.+ ...+|+.+ +-|+|.-.+++.
T Consensus 93 ~~~~~---d~~~~~-----~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 93 CYEQK---AIEDIA-----IEPDAYNVVLSSLALHYIAS--------FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEC---CGGGCC-----CCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEc---chhhCC-----CCCCCeEEEEEchhhhhhhh--------HHHHHHHHHHHcCCCcEEEEE
Confidence 44322 223322 22332223333345788733 45677666 558998776664
No 43
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=86.34 E-value=11 Score=36.69 Aligned_cols=137 Identities=17% Similarity=0.090 Sum_probs=71.6
Q ss_pred HHHHHhhCChhhhHHHHHHHHHHhh----hC-CCceeEEEEcccCC---CCchHHHHHHHhcCCCCCCeEEEEEeCCCCC
Q 009607 228 YHHFYEACPYLKFAHFTANQAILEA----FD-GHDCVHVVDFNLMH---GLQWPALIQALALRPGGPPLLRLTGIGPPSP 299 (531)
Q Consensus 228 ~~~f~e~~P~~kFahftANqAILEA----~~-g~~~VHIIDf~I~~---G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~ 299 (531)
...|.++.|-+. ....+|+..++. +. ....-+|+|+|.|. |. +..+++.. . |..|+|+|+..
T Consensus 44 ~~~~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~~~~~~~~--~----p~~~v~~vD~s-- 113 (274)
T 2qe6_A 44 ADYACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-THEVAQSV--N----PDARVVYVDID-- 113 (274)
T ss_dssp HHHHHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-HHHHHHHH--C----TTCEEEEEESS--
T ss_pred HHHHHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-HHHHHHHh--C----CCCEEEEEECC--
Confidence 344555566543 223445544442 22 22234899999998 83 33333322 1 34699999864
Q ss_pred CChhHHHHHHHHHHHHHHhCCceEEEEEeccCCcccccc--------cccccCCCCeEEeehHHHhhhhcCCCCCCCChH
Q 009607 300 DGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVKP--------WMLQVSPKEALAVNSILQLHKLLGSDPARNSPM 371 (531)
Q Consensus 300 ~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~~--------~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~ 371 (531)
...++...+++.. . -..+|... .+.+... ..+ ..+...+|-+..-||++.+ ...
T Consensus 114 --p~~l~~Ar~~~~~---~--~~v~~~~~---D~~~~~~~~~~~~~~~~~--d~~~~d~v~~~~vlh~~~d------~~~ 175 (274)
T 2qe6_A 114 --PMVLTHGRALLAK---D--PNTAVFTA---DVRDPEYILNHPDVRRMI--DFSRPAAIMLVGMLHYLSP------DVV 175 (274)
T ss_dssp --HHHHHHHHHHHTT---C--TTEEEEEC---CTTCHHHHHHSHHHHHHC--CTTSCCEEEETTTGGGSCT------TTH
T ss_pred --hHHHHHHHHhcCC---C--CCeEEEEe---eCCCchhhhccchhhccC--CCCCCEEEEEechhhhCCc------HHH
Confidence 2455555555421 1 12445332 2322210 112 2234566666677999876 246
Q ss_pred HHHHHHHHh-cCCcEE-EEEecC
Q 009607 372 EMVLGWIRN-LNPKIM-TVVEQE 392 (531)
Q Consensus 372 ~~vL~~Ir~-L~PkIv-tlvEqE 392 (531)
..+|+.+++ |+|.-. ++.+..
T Consensus 176 ~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 176 DRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHHHHHHHHHSCTTCEEEEEEEB
T ss_pred HHHHHHHHHhCCCCcEEEEEEec
Confidence 678877765 899744 444433
No 44
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=86.21 E-value=0.7 Score=43.43 Aligned_cols=94 Identities=13% Similarity=0.200 Sum_probs=49.5
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
.-+|+|+|.|.|. +...|+.+ | .++|||+... ..+ +.|+.. ++|.. . ...++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~----~~~--------~~a~~~---~~~~~--~-d~~~~~ 94 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDINE----DMI--------KFCEGK---FNVVK--S-DAIEYL 94 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSCH----HHH--------HHHHTT---SEEEC--S-CHHHHH
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECCH----HHH--------HHHHhh---cceee--c-cHHHHh
Confidence 3579999998875 34555554 2 2689998642 233 333333 33322 1 122110
Q ss_pred ccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 338 PWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 338 ~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
..+.++ +.|+. ...|||+.+ ..+..+|+.+ +-|+|.-.+++
T Consensus 95 ---~~~~~~~fD~i~~--~~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 95 ---KSLPDKYLDGVMI--SHFVEHLDP------ERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp ---HTSCTTCBSEEEE--ESCGGGSCG------GGHHHHHHHHHHHBCTTCCEEE
T ss_pred ---hhcCCCCeeEEEE--CCchhhCCc------HHHHHHHHHHHHHcCCCcEEEE
Confidence 011223 34443 345788753 3456777766 66899744443
No 45
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=86.15 E-value=0.95 Score=41.67 Aligned_cols=119 Identities=15% Similarity=0.163 Sum_probs=65.1
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc-----
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI----- 321 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv----- 321 (531)
+.|++.+...+.-.|+|+|.+.|. +...|+.+. |..++|||+... ..++...+++. ..++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~----~~~~~a~~~~~----~~~~~~~~~ 83 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVSY----SVLERAKDRLK----IDRLPEMQR 83 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESCH----HHHHHHHHHHT----GGGSCHHHH
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECCH----HHHHHHHHHHH----hhccccccC
Confidence 334455444445589999999985 555666552 447999998752 44555444432 1222
Q ss_pred -eEEEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecCCC
Q 009607 322 -RFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQESN 394 (531)
Q Consensus 322 -pFeF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqEan 394 (531)
..+|..- .++.+... -..=+.|+ |...|||+.+ ..+..+|+.+ +.|+|.-+++......
T Consensus 84 ~~v~~~~~---d~~~~~~~---~~~fD~V~--~~~~l~~~~~------~~~~~~l~~~~~~LkpgG~~i~~~~~~ 144 (219)
T 3jwg_A 84 KRISLFQS---SLVYRDKR---FSGYDAAT--VIEVIEHLDE------NRLQAFEKVLFEFTRPQTVIVSTPNKE 144 (219)
T ss_dssp TTEEEEEC---CSSSCCGG---GTTCSEEE--EESCGGGCCH------HHHHHHHHHHHTTTCCSEEEEEEEBGG
T ss_pred cceEEEeC---cccccccc---cCCCCEEE--EHHHHHhCCH------HHHHHHHHHHHHhhCCCEEEEEccchh
Confidence 3444322 22222210 01113444 3345788743 3356777766 5679998777665543
No 46
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=85.91 E-value=3.3 Score=39.76 Aligned_cols=108 Identities=11% Similarity=0.075 Sum_probs=63.4
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEE
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRG 327 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~ 327 (531)
.+++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+... ..++.+.+ .++..|+..+|..
T Consensus 111 ~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s~----~~~~~a~~----~~~~~~~~~~~~~ 173 (286)
T 3m70_A 111 DVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHNE----NSIAFLNE----TKEKENLNISTAL 173 (286)
T ss_dssp HHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESCH----HHHHHHHH----HHHHTTCCEEEEE
T ss_pred HHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECCH----HHHHHHHH----HHHHcCCceEEEE
Confidence 45555544456689999999985 45556665 2 3899998642 34444443 3445566666643
Q ss_pred eccCCcccccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 328 VAASRLEDVKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 328 v~~~~ledl~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
. .+.++.. ++ +.|+.|. .|||+.. ..+..+|+.+ +.|+|.-++++
T Consensus 174 ~---d~~~~~~------~~~fD~i~~~~--~~~~~~~------~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 174 Y---DINAANI------QENYDFIVSTV--VFMFLNR------ERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp C---CGGGCCC------CSCEEEEEECS--SGGGSCG------GGHHHHHHHHHHTEEEEEEEEE
T ss_pred e---ccccccc------cCCccEEEEcc--chhhCCH------HHHHHHHHHHHHhcCCCcEEEE
Confidence 2 2333221 22 4555554 4677743 4466788766 56799876444
No 47
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=85.45 E-value=4 Score=39.37 Aligned_cols=114 Identities=9% Similarity=-0.004 Sum_probs=62.4
Q ss_pred HHHHhhh----CCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc-
Q 009607 247 QAILEAF----DGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI- 321 (531)
Q Consensus 247 qAILEA~----~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv- 321 (531)
..|++.+ .-.+.-+|+|+|.|.|..-..|.+.+ + .++|||+... ..++...+++. ..|+
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s~----~~~~~a~~~~~----~~~~~ 131 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIAP----VQNKRNEEYNN----QAGLA 131 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCH----HHHHHHHHHHH----HHTCT
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCCH----HHHHHHHHHHH----hcCCC
Confidence 4455555 33455689999999886544444433 2 2899998652 44554444433 3343
Q ss_pred -eEEEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEE-EEEecC
Q 009607 322 -RFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIM-TVVEQE 392 (531)
Q Consensus 322 -pFeF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIv-tlvEqE 392 (531)
.++|... ..+++ .+.++..=+|-|...|||+.+ ...+|+.+ |-|+|.-. ++++..
T Consensus 132 ~~~~~~~~---d~~~~-----~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 132 DNITVKYG---SFLEI-----PCEDNSYDFIWSQDAFLHSPD--------KLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp TTEEEEEC---CTTSC-----SSCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cceEEEEc---CcccC-----CCCCCCEeEEEecchhhhcCC--------HHHHHHHHHHHcCCCeEEEEEEec
Confidence 2555432 23332 222343334445556788743 45666655 56799754 444443
No 48
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=85.34 E-value=4.7 Score=37.42 Aligned_cols=101 Identities=11% Similarity=-0.012 Sum_probs=54.1
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCcccccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVKP 338 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~~ 338 (531)
-.|+|+|.|.|. +...|+. +..++|||+... ..++.+.+++.+.- ..-..+|... .+.++.+
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~----~~~~~a~~~~~~~~--~~~~v~~~~~---d~~~~~~ 129 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDISE----SALAKANETYGSSP--KAEYFSFVKE---DVFTWRP 129 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSCH----HHHHHHHHHHTTSG--GGGGEEEECC---CTTTCCC
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECCH----HHHHHHHHHhhccC--CCcceEEEEC---chhcCCC
Confidence 499999999884 3445554 346899998642 44555444332210 1123455322 2333221
Q ss_pred cccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHh-cCCcEEEEE
Q 009607 339 WMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRN-LNPKIMTVV 389 (531)
Q Consensus 339 ~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~-L~PkIvtlv 389 (531)
.. .=+.|+. ...||++.. ..+..+|+.+++ |+|.-.+++
T Consensus 130 ~~----~fD~v~~--~~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 130 TE----LFDLIFD--YVFFCAIEP------EMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp SS----CEEEEEE--ESSTTTSCG------GGHHHHHHHHHHHEEEEEEEEE
T ss_pred CC----CeeEEEE--ChhhhcCCH------HHHHHHHHHHHHHCCCCcEEEE
Confidence 10 0033333 344677642 356778877754 899877654
No 49
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=85.17 E-value=23 Score=33.93 Aligned_cols=101 Identities=20% Similarity=0.159 Sum_probs=56.7
Q ss_pred CceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccc
Q 009607 256 HDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLED 335 (531)
Q Consensus 256 ~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~led 335 (531)
.+.-.|+|+|.|.|. +...|+.+- |+..++|||+... ..++.+. +.++..+...+|..- ..++
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~s~----~~~~~a~----~~~~~~~~~v~~~~~---d~~~ 83 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDSGE----TLLAEAR----ELFRLLPYDSEFLEG---DATE 83 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEESCH----HHHHHHH----HHHHSSSSEEEEEES---CTTT
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEECCH----HHHHHHH----HHHHhcCCceEEEEc---chhh
Confidence 456789999999983 445566552 2346999998642 3343333 333445656666432 2333
Q ss_pred ccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 336 VKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 336 l~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
+.. ++ +.|+.+ ..||++.+ .+.+|+.+ +-|+|.-.+++
T Consensus 84 ~~~------~~~fD~v~~~--~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~ 124 (284)
T 3gu3_A 84 IEL------NDKYDIAICH--AFLLHMTT--------PETMLQKMIHSVKKGGKIIC 124 (284)
T ss_dssp CCC------SSCEEEEEEE--SCGGGCSS--------HHHHHHHHHHTEEEEEEEEE
T ss_pred cCc------CCCeeEEEEC--ChhhcCCC--------HHHHHHHHHHHcCCCCEEEE
Confidence 221 22 344444 34777643 34566555 66899766543
No 50
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=84.20 E-value=1.8 Score=44.35 Aligned_cols=109 Identities=20% Similarity=0.220 Sum_probs=62.3
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEE
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRG 327 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~ 327 (531)
.|++.+.-.+.-.|+|+|.|.|. ++..|+.+ | .++|||++.. ...+.|+..+++..-.-
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s~------------~~~~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPSS------------GVAAKAREKGIRVRTDF 156 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCCH------------HHHHHHHTTTCCEECSC
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCCH------------HHHHHHHHcCCCcceee
Confidence 45566654556789999999998 55666654 2 2999998752 23345666666654321
Q ss_pred eccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 328 VAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 328 v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
+.....++ +...++..=+|-|...|||+.+ ...+|+.+ |-|+|.-+++++
T Consensus 157 ~~~~~~~~-----l~~~~~~fD~I~~~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 157 FEKATADD-----VRRTEGPANVIYAANTLCHIPY--------VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp CSHHHHHH-----HHHHHCCEEEEEEESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred echhhHhh-----cccCCCCEEEEEECChHHhcCC--------HHHHHHHHHHHcCCCeEEEEE
Confidence 11111111 1112232223333445788743 56677666 557998776665
No 51
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=83.68 E-value=1.4 Score=42.15 Aligned_cols=42 Identities=21% Similarity=0.158 Sum_probs=28.9
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
+.|++.+.-.+.-+|+|+|.|.|. +...|+. |..++|||+..
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s 65 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPS 65 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSC
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCC
Confidence 446666655556789999999986 3444453 23599999875
No 52
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=83.23 E-value=6.6 Score=37.56 Aligned_cols=110 Identities=7% Similarity=0.030 Sum_probs=59.7
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eEE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RFT 324 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pFe 324 (531)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+.+. ++|||+... ..++...++ ++..|+ ..+
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~~----~v~gvd~s~----~~~~~a~~~----~~~~~~~~~~~ 117 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYDV----NVVGLTLSK----NQANHVQQL----VANSENLRSKR 117 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHCC----EEEEEESCH----HHHHHHHHH----HHTCCCCSCEE
T ss_pred HHHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcCC----EEEEEECCH----HHHHHHHHH----HHhcCCCCCeE
Confidence 346666655566789999998875 44455543322 999998642 344444433 333444 344
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
|... .++++. ..=+.|+.+ ..|||+.. .....+|+.+ |-|+|.-.+++
T Consensus 118 ~~~~---d~~~~~------~~fD~v~~~--~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 118 VLLA---GWEQFD------EPVDRIVSI--GAFEHFGH------ERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp EEES---CGGGCC------CCCSEEEEE--SCGGGTCT------TTHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEC---ChhhCC------CCeeEEEEe--CchhhcCh------HHHHHHHHHHHHhcCCCCEEEE
Confidence 4322 233332 111344433 35788743 2355666655 66899755443
No 53
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=83.02 E-value=7.1 Score=38.73 Aligned_cols=109 Identities=11% Similarity=0.076 Sum_probs=60.7
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc-------eEEEEEecc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI-------RFTFRGVAA 330 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv-------pFeF~~v~~ 330 (531)
.-+|+|+|.|.|.- +..++.+.+ -++|||+... ..++...++..+. ++ .++|.....
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~~----~~v~GiD~S~----~~l~~A~~~~~~~----~~~~~~~~~~~~f~~~d~ 112 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGEI----ALLVATDPDA----DAIARGNERYNKL----NSGIKTKYYKFDYIQETI 112 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTTC----SEEEEEESCH----HHHHHHHHHHHHH----CC----CCCEEEEEECCT
T ss_pred CCeEEEEecCCcHh----HHHHHhcCC----CeEEEEECCH----HHHHHHHHHHHhc----cccccccccccchhhhhc
Confidence 45899999999852 222333322 3899998753 5677666654432 32 255643221
Q ss_pred CCccccccccc--ccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 331 SRLEDVKPWML--QVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 331 ~~ledl~~~~L--~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
..+.....| ....+..=+|-|.+.||++.+. . .+..+|+.+ |.|+|.-+.++
T Consensus 113 --~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~----~-~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 113 --RSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHP----R-HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp --TSSSHHHHHHTTCCSSCEEEEEEESCGGGTCST----T-THHHHHHHHHHHEEEEEEEEE
T ss_pred --ccchhhhhhhccccCCCeeEEEECchHHHhCCH----H-HHHHHHHHHHHHcCCCCEEEE
Confidence 011000011 0123444466788889997652 2 346788766 56899877554
No 54
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=82.97 E-value=3 Score=41.97 Aligned_cols=132 Identities=12% Similarity=-0.004 Sum_probs=73.5
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEE
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRG 327 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~ 327 (531)
+|++.+.. --.|+|+|.|.|. |--.++. .+|..++++++-. ...++-+ .+++..+|+++.|..
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~---~~p~a~y~a~DId----~~~le~a----~~~l~~~g~~~~~~v 187 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNP----LAAPWMG---LPAETVYIASDID----ARLVGFV----DEALTRLNVPHRTNV 187 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGG----GCCTTTT---CCTTCEEEEEESB----HHHHHHH----HHHHHHTTCCEEEEE
T ss_pred HHHhccCC--CceeeeeccCccH----HHHHHHh---hCCCCEEEEEeCC----HHHHHHH----HHHHHhcCCCceEEE
Confidence 45666633 3478999988763 2111221 3478899999764 2444444 456667799988853
Q ss_pred eccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcCCcEEEEEecC--CCCCCcchHHHHH
Q 009607 328 VAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQE--SNHNQPEFLDRFT 405 (531)
Q Consensus 328 v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~PkIvtlvEqE--anhN~p~F~~RF~ 405 (531)
.- +....+ -.+.+++.+|-. +|+|-++ .+...++.+..|+|..|+|.=.- .+--++.|
T Consensus 188 ~D------~~~~~p-~~~~DvaL~lkt--i~~Le~q------~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm----- 247 (281)
T 3lcv_B 188 AD------LLEDRL-DEPADVTLLLKT--LPCLETQ------QRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGM----- 247 (281)
T ss_dssp CC------TTTSCC-CSCCSEEEETTC--HHHHHHH------STTHHHHHHHHSSCSEEEEEEECC-------CH-----
T ss_pred ee------ecccCC-CCCcchHHHHHH--HHHhhhh------hhHHHHHHHHHhCCCCEEEeccchhhcCCCcch-----
Confidence 31 111111 123455556654 7888652 23355699999999988774332 12122333
Q ss_pred HHHHHHHHHhhhh
Q 009607 406 TALYYYSTMFDSL 418 (531)
Q Consensus 406 eAL~yYsalFDSL 418 (531)
...|+..|+..
T Consensus 248 --~~~Y~~~~e~~ 258 (281)
T 3lcv_B 248 --FQNYSQSFESQ 258 (281)
T ss_dssp --HHHHHHHHHHH
T ss_pred --hhHHHHHHHHH
Confidence 33566666653
No 55
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=82.92 E-value=7.6 Score=37.87 Aligned_cols=106 Identities=14% Similarity=0.023 Sum_probs=57.4
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EEEEEeccCCcc
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FTFRGVAASRLE 334 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--FeF~~v~~~~le 334 (531)
+.-+|+|+|.|.|. +...||.+ ..|..++|||+... ..++... +.++..|+. .+|..- .+.
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~----~~~~~a~----~~~~~~~~~~~v~~~~~---d~~ 180 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYDP----EALDGAT----RLAAGHALAGQITLHRQ---DAW 180 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESCH----HHHHHHH----HHHTTSTTGGGEEEEEC---CGG
T ss_pred CCCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECCH----HHHHHHH----HHHHhcCCCCceEEEEC---chh
Confidence 34579999999884 34444422 23557999998642 3444443 334455654 666432 233
Q ss_pred cccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 335 DVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 335 dl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
++. .. +..=+|-|..-+||+.+ +.....+|+.+ +.|+|.-.+++.
T Consensus 181 ~~~-----~~-~~fD~v~~~~~~~~~~~-----~~~~~~~l~~~~~~LkpgG~l~i~ 226 (305)
T 3ocj_A 181 KLD-----TR-EGYDLLTSNGLNIYEPD-----DARVTELYRRFWQALKPGGALVTS 226 (305)
T ss_dssp GCC-----CC-SCEEEEECCSSGGGCCC-----HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCC-----cc-CCeEEEEECChhhhcCC-----HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 322 11 22222223344677654 22333467665 568998777663
No 56
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=82.47 E-value=9.5 Score=34.68 Aligned_cols=100 Identities=16% Similarity=0.110 Sum_probs=55.3
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
.-+|+|+|.|.|. +...|+.+ ++ ++|||+.. ...++...+++ +..+...+|... .+.++.
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s----~~~~~~a~~~~----~~~~~~~~~~~~---d~~~~~ 98 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDIS----EDMIRKAREYA----KSRESNVEFIVG---DARKLS 98 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESC----HHHHHHHHHHH----HHTTCCCEEEEC---CTTSCC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECC----HHHHHHHHHHH----HhcCCCceEEEC---chhcCC
Confidence 4589999999883 44556655 33 99999864 24454444433 233334455332 222221
Q ss_pred ccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 338 PWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 338 ~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
+.++ +.|+.|.++.+|+.. ....+|+.+ +.|+|.-.+++.
T Consensus 99 -----~~~~~~D~v~~~~~~~~~~~~--------~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 99 -----FEDKTFDYVIFIDSIVHFEPL--------ELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp -----SCTTCEEEEEEESCGGGCCHH--------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCCcEEEEEEcCchHhCCHH--------HHHHHHHHHHHHcCCCcEEEEE
Confidence 1222 566667665555542 245566655 567998655443
No 57
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=82.43 E-value=2.4 Score=42.71 Aligned_cols=107 Identities=13% Similarity=0.120 Sum_probs=56.8
Q ss_pred HHHhhh--CCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEE
Q 009607 248 AILEAF--DGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTF 325 (531)
Q Consensus 248 AILEA~--~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF 325 (531)
.|++.+ .=.+.-+|+|+|.|.|. +...|+.+. |.+++|+++.| ..+ +.|+... ..+|
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~--------~~a~~~~-~v~~ 240 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---PHLKCTVFDQP-----QVV--------GNLTGNE-NLNF 240 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---TTSEEEEEECH-----HHH--------SSCCCCS-SEEE
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEeccH-----HHH--------hhcccCC-CcEE
Confidence 456555 11233589999999985 445555442 46799999864 122 1222211 1444
Q ss_pred EEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCC----cEEEEEecC
Q 009607 326 RGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNP----KIMTVVEQE 392 (531)
Q Consensus 326 ~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~P----kIvtlvEqE 392 (531)
..- ...+ + + ..-++++.+.+ ||++.+ .....+|+.+ +.|+| ..++++|.-
T Consensus 241 ~~~---d~~~--~--~--~~~D~v~~~~v--lh~~~d------~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 241 VGG---DMFK--S--I--PSADAVLLKWV--LHDWND------EQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp EEC---CTTT--C--C--CCCSEEEEESC--GGGSCH------HHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred EeC---ccCC--C--C--CCceEEEEccc--ccCCCH------HHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 332 1211 1 1 12355555544 788754 2344777766 56799 345666653
No 58
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=82.35 E-value=4.8 Score=36.64 Aligned_cols=109 Identities=14% Similarity=0.126 Sum_probs=62.1
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEE
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRG 327 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~ 327 (531)
.|.+.+...+.-+|+|+|.|.|. +...|+.+ + -++|||+... ..++.+.+++.+ .+ ..+|..
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~----~~~~~a~~~~~~----~~-~~~~~~ 103 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH--C---KRLTVIDVMP----RAIGRACQRTKR----WS-HISWAA 103 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGG--E---EEEEEEESCH----HHHHHHHHHTTT----CS-SEEEEE
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHc--C---CEEEEEECCH----HHHHHHHHhccc----CC-CeEEEE
Confidence 34445566677899999999984 55556655 2 4999998642 445444433322 22 345533
Q ss_pred eccCCcccccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 328 VAASRLEDVKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 328 v~~~~ledl~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
. .++++.+ ++ +.|+.+ ..|||+.+ +..+..+|+.+ +.|+|.-++++.
T Consensus 104 ~---d~~~~~~------~~~fD~v~~~--~~l~~~~~-----~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 104 T---DILQFST------AELFDLIVVA--EVLYYLED-----MTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp C---CTTTCCC------SCCEEEEEEE--SCGGGSSS-----HHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred c---chhhCCC------CCCccEEEEc--cHHHhCCC-----HHHHHHHHHHHHHHcCCCCEEEEE
Confidence 2 2333321 22 344444 55788754 23445666655 668998766653
No 59
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=82.32 E-value=9.9 Score=36.84 Aligned_cols=116 Identities=7% Similarity=0.007 Sum_probs=65.1
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FT 324 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--Fe 324 (531)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+... ..++.+.++ ++..|++ .+
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~----~~~~~a~~~----~~~~~~~~~v~ 125 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTLSE----NQYAHDKAM----FDEVDSPRRKE 125 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEECCH----HHHHHHHHH----HHHSCCSSCEE
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEECCH----HHHHHHHHH----HHhcCCCCceE
Confidence 446677665666789999998774 4444554422 5899998642 445444443 3445654 55
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCC-CCChHHHHHHHH-HhcCCcEEEEE
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPA-RNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~-~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
|..- .++++ .. .=+.|+.+ ..+||+.+.... .....+.+|+.+ +-|+|.-.+++
T Consensus 126 ~~~~---d~~~~-~~-----~fD~v~~~--~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 126 VRIQ---GWEEF-DE-----PVDRIVSL--GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp EEEC---CGGGC-CC-----CCSEEEEE--SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred EEEC---CHHHc-CC-----CccEEEEc--chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 5322 33333 11 11455544 447888662100 124566777766 56799865544
No 60
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=81.80 E-value=1.8 Score=42.90 Aligned_cols=101 Identities=19% Similarity=0.109 Sum_probs=60.4
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
--.|+|+|.|.|. | +++.+ |..+++|++-.. .+-..+.+++...|+++.|...-. .
T Consensus 106 p~~VLDlGCG~gp----L--al~~~----~~~~y~a~DId~--------~~i~~ar~~~~~~g~~~~~~v~D~------~ 161 (253)
T 3frh_A 106 PRRVLDIACGLNP----L--ALYER----GIASVWGCDIHQ--------GLGDVITPFAREKDWDFTFALQDV------L 161 (253)
T ss_dssp CSEEEEETCTTTH----H--HHHHT----TCSEEEEEESBH--------HHHHHHHHHHHHTTCEEEEEECCT------T
T ss_pred CCeEEEecCCccH----H--HHHhc----cCCeEEEEeCCH--------HHHHHHHHHHHhcCCCceEEEeec------c
Confidence 3489999998762 1 22222 667999997542 333445566777799999864321 1
Q ss_pred ccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcCCcEEEEEec
Q 009607 338 PWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQ 391 (531)
Q Consensus 338 ~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~PkIvtlvEq 391 (531)
...+. .+.+++.++-. +|+|-+. .....++.+..|+|..|+|.=.
T Consensus 162 ~~~~~-~~~DvvLllk~--lh~LE~q------~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 162 CAPPA-EAGDLALIFKL--LPLLERE------QAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp TSCCC-CBCSEEEEESC--HHHHHHH------STTHHHHHHHHCBCSEEEEEEE
T ss_pred cCCCC-CCcchHHHHHH--HHHhhhh------chhhHHHHHHHhcCCCEEEEcC
Confidence 11111 13456666654 6777552 2234558888999988877433
No 61
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=81.57 E-value=7.3 Score=36.33 Aligned_cols=110 Identities=12% Similarity=0.071 Sum_probs=60.1
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FT 324 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--Fe 324 (531)
..|++.+.-.+.-+|+|+|.|.|.. ...|+.+.+ .++|||+... ..++... +.++..|+. .+
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~~----~~~la~~~~----~~v~gvD~s~----~~l~~a~----~~~~~~~~~~~v~ 89 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGEM----LCTWARDHG----ITGTGIDMSS----LFTAQAK----RRAEELGVSERVH 89 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCHH----HHHHHHHTC----CEEEEEESCH----HHHHHHH----HHHHHTTCTTTEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHH----HHHHHHhcC----CeEEEEeCCH----HHHHHHH----HHHHhcCCCcceE
Confidence 4455665545556899999999863 334444432 2789998642 3444443 334445653 66
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
|... .++++.. ++..=+|-|...+|++.+ ...+|+.+ |-|+|.-.+++
T Consensus 90 ~~~~---d~~~~~~------~~~fD~V~~~~~~~~~~~--------~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 90 FIHN---DAAGYVA------NEKCDVAACVGATWIAGG--------FAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EEES---CCTTCCC------SSCEEEEEEESCGGGTSS--------SHHHHHHHTTSEEEEEEEEE
T ss_pred EEEC---ChHhCCc------CCCCCEEEECCChHhcCC--------HHHHHHHHHHHcCCCeEEEE
Confidence 6432 3333321 222222233445677643 35667666 55799865444
No 62
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=81.43 E-value=3 Score=38.29 Aligned_cols=115 Identities=19% Similarity=0.187 Sum_probs=63.1
Q ss_pred HHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc------e
Q 009607 249 ILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI------R 322 (531)
Q Consensus 249 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv------p 322 (531)
|++.+...+.-.|+|+|.|.|. +...|+.+. |..++|||+... ..++...+++ +..++ .
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~----~~~~~a~~~~----~~~~~~~~~~~~ 85 (217)
T 3jwh_A 21 VVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVSY----RSLEIAQERL----DRLRLPRNQWER 85 (217)
T ss_dssp HHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESCH----HHHHHHHHHH----TTCCCCHHHHTT
T ss_pred HHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECCH----HHHHHHHHHH----HHhcCCcccCcc
Confidence 4444443444589999999985 455566552 345999998752 4455444433 23333 2
Q ss_pred EEEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecC
Q 009607 323 FTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQE 392 (531)
Q Consensus 323 FeF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqE 392 (531)
.+|..- .++.+... ...=+.|+.+ ..|||+.+ ..+..+|+.+ +-|+|.-++++...
T Consensus 86 v~~~~~---d~~~~~~~---~~~fD~v~~~--~~l~~~~~------~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 86 LQLIQG---ALTYQDKR---FHGYDAATVI--EVIEHLDL------SRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEEEEC---CTTSCCGG---GCSCSEEEEE--SCGGGCCH------HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eEEEeC---Cccccccc---CCCcCEEeeH--HHHHcCCH------HHHHHHHHHHHHHcCCCEEEEEccC
Confidence 455322 22222211 0111445544 34788743 3456788766 45799987776544
No 63
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=80.93 E-value=10 Score=33.55 Aligned_cols=108 Identities=16% Similarity=0.134 Sum_probs=60.2
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc-eEEE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI-RFTF 325 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv-pFeF 325 (531)
+.|++.+...+.-+|+|+|.|.|. +...|+.+ + .++|||+... ..++...+++. ..++ ..+|
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~----~~~~~a~~~~~----~~~~~~~~~ 84 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKNA----MSIANVERIKS----IENLDNLHT 84 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCH----HHHHHHHHHHH----HHTCTTEEE
T ss_pred HHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECCH----HHHHHHHHHHH----hCCCCCcEE
Confidence 456666655455599999999886 34455655 2 3899998642 34544444332 2344 3455
Q ss_pred EEeccCCcccccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEE
Q 009607 326 RGVAASRLEDVKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTV 388 (531)
Q Consensus 326 ~~v~~~~ledl~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtl 388 (531)
... .+.++. . ++ +.|+.+. .+|++.. .....+|+.+ +.|+|.-.++
T Consensus 85 ~~~---d~~~~~-----~-~~~~D~v~~~~--~l~~~~~------~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 85 RVV---DLNNLT-----F-DRQYDFILSTV--VLMFLEA------KTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp EEC---CGGGCC-----C-CCCEEEEEEES--CGGGSCG------GGHHHHHHHHHHTEEEEEEEE
T ss_pred EEc---chhhCC-----C-CCCceEEEEcc--hhhhCCH------HHHHHHHHHHHHhcCCCeEEE
Confidence 322 222222 1 22 3444443 4677642 3456677666 5679986633
No 64
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=80.74 E-value=2.9 Score=40.09 Aligned_cols=99 Identities=10% Similarity=0.116 Sum_probs=56.4
Q ss_pred EEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccccc
Q 009607 260 HVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVKPW 339 (531)
Q Consensus 260 HIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~~~ 339 (531)
+|+|+|.|.| .|--.++.+ .|..+++|++-. ...++-+. +.|+..|+...++.. +-.+.
T Consensus 52 ~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di~----~~~leiar----~~~~~~g~~~~v~~~--d~~~~---- 110 (200)
T 3fzg_A 52 SILDFGCGFN----PLALYQWNE---NEKIIYHAYDID----RAEIAFLS----SIIGKLKTTIKYRFL--NKESD---- 110 (200)
T ss_dssp EEEEETCTTH----HHHHHHHCS---SCCCEEEEECSC----HHHHHHHH----HHHHHSCCSSEEEEE--CCHHH----
T ss_pred eEEEecCCCC----HHHHHHHhc---CCCCEEEEEeCC----HHHHHHHH----HHHHhcCCCccEEEe--ccccc----
Confidence 7899988765 455555544 455599999864 24454444 445667876444321 11111
Q ss_pred ccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcCCcEEEEEec
Q 009607 340 MLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQ 391 (531)
Q Consensus 340 ~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~PkIvtlvEq 391 (531)
.-++ ++|..+.+ ||+| ++ ....+.+.++.|+|..++|.=.
T Consensus 111 ---~~~~~~DvVLa~k~--LHlL-~~------~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 111 ---VYKGTYDVVFLLKM--LPVL-KQ------QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ---HTTSEEEEEEEETC--HHHH-HH------TTCCHHHHHHTCEEEEEEEEEE
T ss_pred ---CCCCCcChhhHhhH--HHhh-hh------hHHHHHHHHHHhCCCCEEEEeC
Confidence 1122 34444433 6888 42 2234557889999998887544
No 65
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=79.45 E-value=3 Score=40.49 Aligned_cols=111 Identities=15% Similarity=0.090 Sum_probs=60.8
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCC----ce
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVN----IR 322 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lg----vp 322 (531)
..+++.+..... .|+|+|.|.|. +...|+.+ + .++|||+.. ...++...+++. ..+ ..
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s----~~~~~~a~~~~~----~~~~~~~~~ 134 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGR----LTFPFLDL-G----WEVTALELS----TSVLAAFRKRLA----EAPADVRDR 134 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT-T----CCEEEEESC----HHHHHHHHHHHH----TSCHHHHTT
T ss_pred HHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc-C----CeEEEEECC----HHHHHHHHHHHh----hcccccccc
Confidence 345555554444 89999999997 44555655 2 489999864 244555544433 333 23
Q ss_pred EEEEEeccCCcccccccccccCCCCe-EEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 323 FTFRGVAASRLEDVKPWMLQVSPKEA-LAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 323 FeF~~v~~~~ledl~~~~L~i~~gEa-LaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
.+|..- .++++. . ++.. +||.+...+|++. +..+..+|+.+ +.|+|.-.++++
T Consensus 135 v~~~~~---d~~~~~-----~-~~~fD~v~~~~~~~~~~~------~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 135 CTLVQG---DMSAFA-----L-DKRFGTVVISSGSINELD------EADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp EEEEEC---BTTBCC-----C-SCCEEEEEECHHHHTTSC------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEeC---chhcCC-----c-CCCcCEEEECCcccccCC------HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 555432 233322 1 2222 3333333455542 23467788766 567998766654
No 66
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=79.01 E-value=12 Score=37.48 Aligned_cols=143 Identities=15% Similarity=0.090 Sum_probs=76.1
Q ss_pred HHHHHHHhhCChhhhHHHHHHHHHHhhh----CCC-ceeEEEEcccCCCC--chHHHHHHHhcCCCCCCeEEEEEeCCCC
Q 009607 226 ILYHHFYEACPYLKFAHFTANQAILEAF----DGH-DCVHVVDFNLMHGL--QWPALIQALALRPGGPPLLRLTGIGPPS 298 (531)
Q Consensus 226 ~~~~~f~e~~P~~kFahftANqAILEA~----~g~-~~VHIIDf~I~~G~--QWpsLiqaLA~R~gGPP~LRITgI~~p~ 298 (531)
.+-..+.+..|-++ ...-+|.+.|.-+ .++ ..=+|+|+|.|-|. .--.+.|.++ |..|||+|+..
T Consensus 43 ~~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~------P~arVv~VD~s- 114 (277)
T 3giw_A 43 EAGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA------PESRVVYVDND- 114 (277)
T ss_dssp HHHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC------TTCEEEEEECC-
T ss_pred HHHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC------CCCEEEEEeCC-
Confidence 34556778889874 3345788777643 222 22379999999744 2233344332 45699999864
Q ss_pred CCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc--------ccccccCCCCeEEeehHHHhhhhcCCCCCCCCh
Q 009607 299 PDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK--------PWMLQVSPKEALAVNSILQLHKLLGSDPARNSP 370 (531)
Q Consensus 299 ~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~--------~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~ 370 (531)
...|+....+|.+. -.-..+|... .+.++. ...+. .++.++|-+..-||+|.++ ..+
T Consensus 115 ---p~mLa~Ar~~l~~~---~~~~~~~v~a---D~~~~~~~l~~~~~~~~~D--~~~p~av~~~avLH~l~d~----~~p 179 (277)
T 3giw_A 115 ---PIVLTLSQGLLAST---PEGRTAYVEA---DMLDPASILDAPELRDTLD--LTRPVALTVIAIVHFVLDE----DDA 179 (277)
T ss_dssp ---HHHHHTTHHHHCCC---SSSEEEEEEC---CTTCHHHHHTCHHHHTTCC--TTSCCEEEEESCGGGSCGG----GCH
T ss_pred ---hHHHHHHHHHhccC---CCCcEEEEEe---cccChhhhhcccccccccC--cCCcchHHhhhhHhcCCch----hhH
Confidence 24555555444321 1123555433 233321 11233 2343444455558999762 123
Q ss_pred HHHHHHHHHhcCCcEE-EEEec
Q 009607 371 MEMVLGWIRNLNPKIM-TVVEQ 391 (531)
Q Consensus 371 ~~~vL~~Ir~L~PkIv-tlvEq 391 (531)
...+=+..+.|+|.=+ ++.+-
T Consensus 180 ~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 180 VGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp HHHHHHHHTTSCTTCEEEEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEec
Confidence 4433355677899754 44443
No 67
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=78.83 E-value=4.9 Score=40.65 Aligned_cols=44 Identities=16% Similarity=0.182 Sum_probs=30.3
Q ss_pred HHHHHhhhC-CCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCC
Q 009607 246 NQAILEAFD-GHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGP 296 (531)
Q Consensus 246 NqAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~ 296 (531)
...|++.+. -.+.-+|+|+|.|.|. +...|+.+. |.+++|+++.
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~ 241 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---PLIKGINFDL 241 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---CCCeEEEeCh
Confidence 356777765 2455789999999885 445555542 4679999976
No 68
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=76.47 E-value=8.7 Score=39.47 Aligned_cols=124 Identities=13% Similarity=0.084 Sum_probs=66.2
Q ss_pred HHHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEE
Q 009607 245 ANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFT 324 (531)
Q Consensus 245 ANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFe 324 (531)
..+.+++.+.....-+|+|+|.|.|. +...|+.+. |..++|||+.. ...++.+.+++...--.-.+.++
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~s----~~al~~Ar~n~~~ngl~~~~~v~ 278 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDES----PMAVASSRLNVETNMPEALDRCE 278 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEESC----HHHHHHHHHHHHHHCGGGGGGEE
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEECc----HHHHHHHHHHHHHcCCCcCceEE
Confidence 34567888877666789999999984 444455442 34699999864 24555555444332101112356
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEec
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQ 391 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEq 391 (531)
|..- +-.+.+.... =+.|+.|-.| |+.... .......+++.+ +-|+|.-.+++..
T Consensus 279 ~~~~--D~~~~~~~~~-----fD~Ii~nppf--h~~~~~---~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 279 FMIN--NALSGVEPFR-----FNAVLCNPPF--HQQHAL---TDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp EEEC--STTTTCCTTC-----EEEEEECCCC------------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEec--hhhccCCCCC-----eeEEEECCCc--ccCccc---CHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 6432 2222221111 1567778765 432211 123344677666 4589987766643
No 69
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=76.35 E-value=26 Score=32.04 Aligned_cols=23 Identities=17% Similarity=0.244 Sum_probs=18.8
Q ss_pred cccchhhHHHHHhcCCceeccCC
Q 009607 452 RHEPLAKWRNRLAGAGFRPLHLG 474 (531)
Q Consensus 452 RhE~~~~Wr~rm~~AGF~~vpls 474 (531)
+.-+.+.|+..|+++||+.+.+.
T Consensus 164 ~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 164 RFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCHHHHHHHHHHCCCeEEEEe
Confidence 44567899999999999987764
No 70
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=75.53 E-value=9.8 Score=36.81 Aligned_cols=111 Identities=13% Similarity=0.067 Sum_probs=59.1
Q ss_pred CceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccc
Q 009607 256 HDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLED 335 (531)
Q Consensus 256 ~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~led 335 (531)
.+.-+|+|+|.|.|. +...|+.+- ++..++|||+... ..++...+++.+. ....-..+|... .+++
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s~----~~~~~a~~~~~~~-~~~~~~v~~~~~---d~~~ 100 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDLSA----TMIKTAEVIKEGS-PDTYKNVSFKIS---SSDD 100 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEESCH----HHHHHHHHHHHHC-C-CCTTEEEEEC---CTTC
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCCH----HHHHHHHHHHHhc-cCCCCceEEEEc---CHHh
Confidence 456789999999884 444455421 1346999998752 4455444443322 011334555433 3333
Q ss_pred ccccc-cccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 336 VKPWM-LQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 336 l~~~~-L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
+.... ..+..+..=+|-|...||++ + ...+|+.+ +-|+|.-.+++
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF-D--------FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCccccccccCCCeeEEeHhhHHHHh-C--------HHHHHHHHHHhcCCCcEEEE
Confidence 33211 01112434344445568887 4 45677655 56799866554
No 71
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=74.27 E-value=8 Score=33.70 Aligned_cols=40 Identities=18% Similarity=0.070 Sum_probs=27.8
Q ss_pred HHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 249 ILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 249 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
+++.+.-.+.-.|+|+|.|.|. +...|+.+. . ++|||+..
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s 48 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDIN 48 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSC
T ss_pred HHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCC
Confidence 4555555566789999999986 344555442 2 99999864
No 72
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=74.20 E-value=9.7 Score=34.29 Aligned_cols=109 Identities=17% Similarity=0.111 Sum_probs=59.0
Q ss_pred HHHHHhhhCC-CceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCC-ceE
Q 009607 246 NQAILEAFDG-HDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVN-IRF 323 (531)
Q Consensus 246 NqAILEA~~g-~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lg-vpF 323 (531)
.+.|++.+.. .+.-+|+|+|.|.|. +...|+.+ | .++|||+... ..+ +.|+..+ -..
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~s~----~~~--------~~a~~~~~~~~ 92 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A---DRVTALDGSA----EMI--------AEAGRHGLDNV 92 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S---SEEEEEESCH----HHH--------HHHGGGCCTTE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C---CeEEEEeCCH----HHH--------HHHHhcCCCCe
Confidence 4456676653 333599999999985 44445544 2 3999998642 222 3344444 234
Q ss_pred EEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEE-EEEe
Q 009607 324 TFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIM-TVVE 390 (531)
Q Consensus 324 eF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIv-tlvE 390 (531)
+|... .+.++ ..++..=+|-|...|||+.+ ..+..+|+.+ +-|+|.-. ++++
T Consensus 93 ~~~~~---d~~~~------~~~~~~D~v~~~~~l~~~~~------~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 93 EFRQQ---DLFDW------TPDRQWDAVFFAHWLAHVPD------DRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp EEEEC---CTTSC------CCSSCEEEEEEESCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEec---ccccC------CCCCceeEEEEechhhcCCH------HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 55332 22222 12232223333446788743 2356777766 56799755 4444
No 73
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=72.12 E-value=20 Score=31.27 Aligned_cols=40 Identities=15% Similarity=0.203 Sum_probs=25.8
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
.+++.+-. +.-+|+|+|.+.|. +...|+.+ + .++|||+..
T Consensus 38 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~~ 77 (195)
T 3cgg_A 38 RLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ-G----HDVLGTDLD 77 (195)
T ss_dssp HHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT-T----CEEEEEESC
T ss_pred HHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC-C----CcEEEEcCC
Confidence 34555432 34589999999875 34455555 2 389999864
No 74
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=72.07 E-value=25 Score=32.18 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=29.2
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
..|.+.+...+.-+|+|+|.|.|. +...|+.+ |. -++|||+..
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s 75 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLS 75 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESC
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCC
Confidence 456666665556689999999885 34455555 22 189999864
No 75
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=71.94 E-value=25 Score=30.41 Aligned_cols=61 Identities=10% Similarity=0.029 Sum_probs=38.9
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR 322 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp 322 (531)
+.+++.+.-...-+|+|+|.|.| .+...|+.+. |..++|||+... ..++.+.++ ++..|++
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G----~~~~~l~~~~---~~~~v~~vD~~~----~~~~~a~~~----~~~~~~~ 75 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSG----SIAIEWLRST---PQTTAVCFEISE----ERRERILSN----AINLGVS 75 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTT----HHHHHHHTTS---SSEEEEEECSCH----HHHHHHHHH----HHTTTCT
T ss_pred HHHHHHhcccCCCeEEEeCCCCC----HHHHHHHHHC---CCCeEEEEeCCH----HHHHHHHHH----HHHhCCC
Confidence 45666666666678999999987 3455566553 457999998642 345444433 3445654
No 76
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=70.84 E-value=9.5 Score=34.84 Aligned_cols=116 Identities=15% Similarity=0.075 Sum_probs=60.8
Q ss_pred HHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc-eEEEEE
Q 009607 249 ILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI-RFTFRG 327 (531)
Q Consensus 249 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv-pFeF~~ 327 (531)
.++.+...+.-+|+|+|.|.|. +...|+.+ -|..++|||+... ..++.+.++..+-++..++ ..+|..
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~----~~~~la~~---~p~~~v~gvD~s~----~~l~~~~~~a~~~~~~~~~~~v~~~~ 87 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGK----HPYKVARQ---NPSRLVVALDADK----SRMEKISAKAAAKPAKGGLPNLLYLW 87 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCH----HHHHHHHH---CTTEEEEEEESCG----GGGHHHHHHHTSCGGGTCCTTEEEEE
T ss_pred HHHHhhccCCCEEEEecCCCCH----HHHHHHHH---CCCCEEEEEECCH----HHHHHHHHHHHHhhhhcCCCceEEEe
Confidence 3444445566789999999885 33344443 2457999998753 3455444433333334454 355543
Q ss_pred eccCCcccccccccccCCCCeEEeeh-HHHh--hhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 328 VAASRLEDVKPWMLQVSPKEALAVNS-ILQL--HKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 328 v~~~~ledl~~~~L~i~~gEaLaVN~-~f~L--H~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
. ..+++... -.. +.+.+.. ...+ ||+.+ + ..+|+.+ |-|+|.-.+++.
T Consensus 88 ~---d~~~l~~~---~~~-d~v~~~~~~~~~~~~~~~~-------~-~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 88 A---TAERLPPL---SGV-GELHVLMPWGSLLRGVLGS-------S-PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp C---CSTTCCSC---CCE-EEEEEESCCHHHHHHHHTS-------S-SHHHHHHHHTEEEEEEEEEE
T ss_pred c---chhhCCCC---CCC-CEEEEEccchhhhhhhhcc-------H-HHHHHHHHHHcCCCcEEEEE
Confidence 2 33333211 011 2222222 2223 46544 2 3566555 668999887764
No 77
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=70.53 E-value=17 Score=31.50 Aligned_cols=103 Identities=15% Similarity=0.062 Sum_probs=56.3
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc-eEEEE
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI-RFTFR 326 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv-pFeF~ 326 (531)
.|++.+.-.+.-+|+|+|.|.|. +...|+. +..++|||+... ..++.+.++ ++..|+ ..+|.
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~~----~~~~~a~~~----~~~~~~~~~~~~ 88 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYLD----GAIEVTKQN----LAKFNIKNCQII 88 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECSH----HHHHHHHHH----HHHTTCCSEEEE
T ss_pred HHHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCCH----HHHHHHHHH----HHHcCCCcEEEE
Confidence 35555554555689999999986 3444554 346999998642 344444433 334454 34553
Q ss_pred EeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcCCcEEEEE
Q 009607 327 GVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVV 389 (531)
Q Consensus 327 ~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~PkIvtlv 389 (531)
. . .+.+. +.-..=+.|+.+.. ...+.+|+.++++ |.-.+++
T Consensus 89 ~--~-d~~~~----~~~~~~D~i~~~~~--------------~~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 89 K--G-RAEDV----LDKLEFNKAFIGGT--------------KNIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp E--S-CHHHH----GGGCCCSEEEECSC--------------SCHHHHHHHHHHT-TCCEEEE
T ss_pred E--C-Ccccc----ccCCCCcEEEECCc--------------ccHHHHHHHHhhC-CCCEEEE
Confidence 2 2 22221 10011145555443 2356789999888 8654443
No 78
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=70.19 E-value=20 Score=33.29 Aligned_cols=100 Identities=14% Similarity=0.158 Sum_probs=54.4
Q ss_pred CceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccc
Q 009607 256 HDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLED 335 (531)
Q Consensus 256 ~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~led 335 (531)
.+.-+|+|+|.|.|.- ...|+.+ + .++|||+... ..++...+++ +...-.++|... ..++
T Consensus 38 ~~~~~vLDiG~G~G~~----~~~l~~~-~----~~v~~vD~s~----~~~~~a~~~~----~~~~~~~~~~~~---d~~~ 97 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRI----ALPLIAR-G----YRYIALDADA----AMLEVFRQKI----AGVDRKVQVVQA---DARA 97 (263)
T ss_dssp SSCCEEEEETCTTSTT----HHHHHTT-T----CEEEEEESCH----HHHHHHHHHT----TTSCTTEEEEES---CTTS
T ss_pred CCCCEEEEeCCcCCHH----HHHHHHC-C----CEEEEEECCH----HHHHHHHHHh----hccCCceEEEEc---cccc
Confidence 3456899999999864 3344544 2 3899998652 3444444333 222234555432 2333
Q ss_pred ccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 336 VKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 336 l~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
+. +.++ +.|+. ...||++.+ ...+|+.+ +-|+|.-.+++.
T Consensus 98 ~~-----~~~~~fD~v~~--~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 98 IP-----LPDESVHGVIV--VHLWHLVPD--------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CC-----SCTTCEEEEEE--ESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CC-----CCCCCeeEEEE--CCchhhcCC--------HHHHHHHHHHHCCCCcEEEEE
Confidence 22 2233 34443 345788643 45566655 667998665554
No 79
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=68.48 E-value=25 Score=30.62 Aligned_cols=115 Identities=10% Similarity=-0.030 Sum_probs=62.6
Q ss_pred HHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce---
Q 009607 246 NQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--- 322 (531)
Q Consensus 246 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--- 322 (531)
.+.+++.+.-.+.-+|+|+|.|.|. +...|+.+ + .++|||+... ..++...++ ++..+++
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-~----~~v~~~D~~~----~~~~~a~~~----~~~~~~~~~~ 103 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGV----IGIALADE-V----KSTTMADINR----RAIKLAKEN----IKLNNLDNYD 103 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-S----SEEEEEESCH----HHHHHHHHH----HHHTTCTTSC
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-C----CeEEEEECCH----HHHHHHHHH----HHHcCCCccc
Confidence 4556777665566789999999884 44456655 2 3899998642 344444433 3344554
Q ss_pred EEEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecCC
Q 009607 323 FTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQES 393 (531)
Q Consensus 323 FeF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqEa 393 (531)
.+|... .+.+..+ -..=+.|+.|..+ |+- ......+|+.+ +.|+|.-.+++....
T Consensus 104 ~~~~~~---d~~~~~~----~~~~D~v~~~~~~--~~~-------~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 104 IRVVHS---DLYENVK----DRKYNKIITNPPI--RAG-------KEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp EEEEEC---STTTTCT----TSCEEEEEECCCS--TTC-------HHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred eEEEEC---chhcccc----cCCceEEEECCCc--ccc-------hhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 566432 2222111 0111456666542 320 12345666655 568998766655443
No 80
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=67.85 E-value=6 Score=38.59 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=32.9
Q ss_pred HHHhhhCCC--ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHH
Q 009607 248 AILEAFDGH--DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAEL 315 (531)
Q Consensus 248 AILEA~~g~--~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~f 315 (531)
.+++.+... +.-.|+|+|.+.| .+...|+.+-++ .+||||+... ..++.+.+++...
T Consensus 35 ~~l~~l~~~~~~~~~VLDiGCG~G----~~~~~la~~~~~---~~v~gvDis~----~~i~~A~~~~~~~ 93 (292)
T 3g07_A 35 GRLRVLKPEWFRGRDVLDLGCNVG----HLTLSIACKWGP---SRMVGLDIDS----RLIHSARQNIRHY 93 (292)
T ss_dssp GGGGTSCGGGTTTSEEEEESCTTC----HHHHHHHHHTCC---SEEEEEESCH----HHHHHHHHTC---
T ss_pred HHHHhhhhhhcCCCcEEEeCCCCC----HHHHHHHHHcCC---CEEEEECCCH----HHHHHHHHHHHhh
Confidence 344444433 3457999999998 344455555322 3999998752 4555555555443
No 81
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=67.83 E-value=11 Score=34.46 Aligned_cols=94 Identities=15% Similarity=0.141 Sum_probs=50.6
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCcccccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVKP 338 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~~ 338 (531)
-+|+|+|.|.|. +...|+.+ ++ ++|||+... ..++...+++.. ..+|... ..+++.
T Consensus 44 ~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~----~~~~~a~~~~~~-------~v~~~~~---d~~~~~- 99 (250)
T 2p7i_A 44 GNLLELGSFKGD----FTSRLQEH--FN---DITCVEASE----EAISHAQGRLKD-------GITYIHS---RFEDAQ- 99 (250)
T ss_dssp SCEEEESCTTSH----HHHHHTTT--CS---CEEEEESCH----HHHHHHHHHSCS-------CEEEEES---CGGGCC-
T ss_pred CcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCCH----HHHHHHHHhhhC-------CeEEEEc---cHHHcC-
Confidence 369999999884 45556654 33 799998652 334333322211 3444322 233321
Q ss_pred cccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHH--hcCCcEEEEE
Q 009607 339 WMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIR--NLNPKIMTVV 389 (531)
Q Consensus 339 ~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir--~L~PkIvtlv 389 (531)
.++..=+|-|...|||+.+ .+.+|+.++ -|+|.-.+++
T Consensus 100 -----~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 100 -----LPRRYDNIVLTHVLEHIDD--------PVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp -----CSSCEEEEEEESCGGGCSS--------HHHHHHHHHHTTEEEEEEEEE
T ss_pred -----cCCcccEEEEhhHHHhhcC--------HHHHHHHHHHHhcCCCCEEEE
Confidence 1232223334446888744 357777766 5799755444
No 82
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=67.83 E-value=28 Score=32.63 Aligned_cols=98 Identities=18% Similarity=0.251 Sum_probs=54.7
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
.-.|+|+|.|.|. +...|+.+ |+ ++|||+... ..++...+++. ++ +|... .++++.
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~----~~~~~a~~~~~------~~--~~~~~---d~~~~~ 106 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--FG---TVEGLELSA----DMLAIARRRNP------DA--VLHHG---DMRDFS 106 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--SS---EEEEEESCH----HHHHHHHHHCT------TS--EEEEC---CTTTCC
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--CC---eEEEEECCH----HHHHHHHhhCC------CC--EEEEC---ChHHCC
Confidence 3579999999884 55666665 32 899998642 34443333321 33 33221 233322
Q ss_pred ccccccCCCCeEEeehHH-HhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 338 PWMLQVSPKEALAVNSIL-QLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 338 ~~~L~i~~gEaLaVN~~f-~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
. ++..=+|-|.+ .|||+.. +.....+|+.+ +-|+|.-+++++
T Consensus 107 -----~-~~~fD~v~~~~~~l~~~~~-----~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 -----L-GRRFSAVTCMFSSIGHLAG-----QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp -----C-SCCEEEEEECTTGGGGSCH-----HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred -----c-cCCcCEEEEcCchhhhcCC-----HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 23222333333 5788743 23456677766 557999888876
No 83
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=67.50 E-value=31 Score=31.88 Aligned_cols=111 Identities=14% Similarity=0.224 Sum_probs=59.3
Q ss_pred HHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEe
Q 009607 249 ILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGV 328 (531)
Q Consensus 249 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v 328 (531)
+++.....+.-+|+|+|.|.|. +...|+.+ | .++|||+... ..++...+++ +..++..+|...
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~----~~l~~a~~~~----~~~~~~v~~~~~ 95 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGI----PTLELAER-G----YEVVGLDLHE----EMLRVARRKA----KERNLKIEFLQG 95 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCH----HHHHHHHHHH----HHTTCCCEEEES
T ss_pred HHHHhcccCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEECCH----HHHHHHHHHH----HhcCCceEEEEC
Confidence 4444443445689999999984 34455555 2 3899998642 4555554443 334555555432
Q ss_pred ccCCcccccccccccCCC-CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEec
Q 009607 329 AASRLEDVKPWMLQVSPK-EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQ 391 (531)
Q Consensus 329 ~~~~ledl~~~~L~i~~g-EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEq 391 (531)
...++.. ... +.|+.++. .+|++ . ......+|+.+ +.|+|.-+++++-
T Consensus 96 ---d~~~~~~-----~~~fD~v~~~~~-~~~~~-~-----~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 96 ---DVLEIAF-----KNEFDAVTMFFS-TIMYF-D-----EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp ---CGGGCCC-----CSCEEEEEECSS-GGGGS-C-----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---Chhhccc-----CCCccEEEEcCC-chhcC-C-----HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 2222221 111 23332211 12332 1 13456677665 5689998887764
No 84
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=67.48 E-value=7.2 Score=35.52 Aligned_cols=19 Identities=11% Similarity=0.265 Sum_probs=15.8
Q ss_pred chhhHHHHHhcCCceeccC
Q 009607 455 PLAKWRNRLAGAGFRPLHL 473 (531)
Q Consensus 455 ~~~~Wr~rm~~AGF~~vpl 473 (531)
+.+.|...|+.+||+.+..
T Consensus 158 ~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 158 DVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp CHHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEE
Confidence 6678999999999988763
No 85
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=66.45 E-value=8.3 Score=34.56 Aligned_cols=109 Identities=14% Similarity=0.106 Sum_probs=59.4
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc-eEEEEEeccCCccccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI-RFTFRGVAASRLEDVK 337 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv-pFeF~~v~~~~ledl~ 337 (531)
-.|+|+|.|.|.- ...++.+. .-++|||+.. ...++.+.+++ +..++ ..+|..- ...++.
T Consensus 46 ~~vLDlgcG~G~~----~~~~~~~~----~~~v~~vD~~----~~~~~~a~~~~----~~~~~~~v~~~~~---d~~~~~ 106 (189)
T 3p9n_A 46 LAVLDLYAGSGAL----GLEALSRG----AASVLFVESD----QRSAAVIARNI----EALGLSGATLRRG---AVAAVV 106 (189)
T ss_dssp CEEEEETCTTCHH----HHHHHHTT----CSEEEEEECC----HHHHHHHHHHH----HHHTCSCEEEEES---CHHHHH
T ss_pred CEEEEeCCCcCHH----HHHHHHCC----CCeEEEEECC----HHHHHHHHHHH----HHcCCCceEEEEc---cHHHHH
Confidence 4699999998842 22233342 2489999864 24455554443 33344 3444322 222221
Q ss_pred ccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHh---cCCcEEEEEecCCCCC
Q 009607 338 PWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRN---LNPKIMTVVEQESNHN 396 (531)
Q Consensus 338 ~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~---L~PkIvtlvEqEanhN 396 (531)
.. +.-..=+.|+.|..+ |+. ....+.+|..+++ |+|.-++++|.+....
T Consensus 107 ~~-~~~~~fD~i~~~~p~--~~~-------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 107 AA-GTTSPVDLVLADPPY--NVD-------SADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HH-CCSSCCSEEEECCCT--TSC-------HHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred hh-ccCCCccEEEECCCC--Ccc-------hhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 10 000112577777653 221 1346678877765 8999998888776544
No 86
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=65.77 E-value=4.7 Score=38.66 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=61.0
Q ss_pred HHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCC-ceEEEEE
Q 009607 249 ILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVN-IRFTFRG 327 (531)
Q Consensus 249 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lg-vpFeF~~ 327 (531)
|++.+...+.-+|+|+|.|.|. +...|+.+ |+ ++|||+... ..++.+.+++.+.....+ ..+.|..
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~----~~l~~a~~~~~~~~~~~~~~~~~~~~ 115 (293)
T 3thr_A 49 LLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDASD----KMLKYALKERWNRRKEPAFDKWVIEE 115 (293)
T ss_dssp HHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESCH----HHHHHHHHHHHHTTTSHHHHTCEEEE
T ss_pred HHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECCH----HHHHHHHHhhhhcccccccceeeEee
Confidence 4444433455689999999985 34445555 33 999998652 455555544422111111 1233322
Q ss_pred eccCCcccccccccccCCCCeEEeehH-HHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 328 VAASRLEDVKPWMLQVSPKEALAVNSI-LQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 328 v~~~~ledl~~~~L~i~~gEaLaVN~~-f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
- .+.++... + ..++..=+|-|. ..|||+.+... .......+|+.+ +.|+|.-.+++.
T Consensus 116 ~---d~~~~~~~-~-~~~~~fD~V~~~g~~l~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 116 A---NWLTLDKD-V-PAGDGFDAVICLGNSFAHLPDSKG-DQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp C---CGGGHHHH-S-CCTTCEEEEEECTTCGGGSCCSSS-SSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred c---ChhhCccc-c-ccCCCeEEEEEcChHHhhcCcccc-CHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 1 22222110 0 222322233333 45788765110 113366677666 558998665544
No 87
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=65.59 E-value=29 Score=33.73 Aligned_cols=115 Identities=10% Similarity=0.011 Sum_probs=59.1
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHh----CCceEEEEEeccCC
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARS----VNIRFTFRGVAASR 332 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~----lgvpFeF~~v~~~~ 332 (531)
+.-+|+|+|.|.|.- ...|+.++ .-++|||+.. ...++...+++...... ....++|... .
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~s----~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~---D 98 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDIA----DVSVKQCQQRYEDMKNRRDSEYIFSAEFITA---D 98 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEESC----HHHHHHHHHHHHHHHSSSCC-CCCEEEEEEC---C
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeCC----HHHHHHHHHHHHHhhhcccccccceEEEEEe---c
Confidence 456899999999874 33444432 3489999865 25566666555443210 1123455332 2
Q ss_pred cccccc-cccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 333 LEDVKP-WMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 333 ledl~~-~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
.+++.. ..+.-.++..=+|-|.+.||++.. .......+|+.+ +.|+|.-++++.
T Consensus 99 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~----~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 99 SSKELLIDKFRDPQMCFDICSCQFVCHYSFE----SYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp TTTSCSTTTCSSTTCCEEEEEEETCGGGGGG----SHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccccchhhhcccCCCCEEEEEEecchhhccC----CHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 333220 001111222223334456888732 123355677766 568998765543
No 88
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=65.37 E-value=3.8 Score=34.53 Aligned_cols=42 Identities=19% Similarity=0.403 Sum_probs=32.7
Q ss_pred CCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEE
Q 009607 285 GPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFR 326 (531)
Q Consensus 285 GPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~ 326 (531)
|||..|||...+.-......|+++-..+.+..+..|..|+|+
T Consensus 50 gaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 50 GAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp STTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 677777777765432234688999999999999999999985
No 89
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=64.76 E-value=20 Score=32.79 Aligned_cols=103 Identities=9% Similarity=0.116 Sum_probs=56.8
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCcccc
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDV 336 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl 336 (531)
+.-+|+|+|.|.|.- ...|+.+ | .++|||+.. ...++...+++ ...++..+|... .+.++
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~--~---~~~~~~D~s----~~~~~~a~~~~----~~~~~~~~~~~~---d~~~~ 96 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK--F---KNTWAVDLS----QEMLSEAENKF----RSQGLKPRLACQ---DISNL 96 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG--S---SEEEEECSC----HHHHHHHHHHH----HHTTCCCEEECC---CGGGC
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC--C---CcEEEEECC----HHHHHHHHHHH----hhcCCCeEEEec---ccccC
Confidence 456899999999873 3445544 2 389999864 24455554443 333444444322 23322
Q ss_pred cccccccCCCCeEEeehHH-HhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 337 KPWMLQVSPKEALAVNSIL-QLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 337 ~~~~L~i~~gEaLaVN~~f-~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
. +. ..=+.|+. .. .|||+.. +.....+|+.+ +.|+|.-+++++
T Consensus 97 ~---~~-~~fD~v~~--~~~~l~~~~~-----~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 97 N---IN-RKFDLITC--CLDSTNYIID-----SDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp C---CS-CCEEEEEE--CTTGGGGCCS-----HHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred C---cc-CCceEEEE--cCccccccCC-----HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 11 11133433 33 5788743 23456677766 557998776664
No 90
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=62.68 E-value=41 Score=30.16 Aligned_cols=42 Identities=29% Similarity=0.409 Sum_probs=30.3
Q ss_pred HHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 246 NQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 246 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
.+.|++.+. .+.-+|+|+|.|.| .+...|+.+ + .++|||+..
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G----~~~~~l~~~-~----~~~~~~D~~ 63 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSG----ALGAAIKEN-G----TRVSGIEAF 63 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTS----HHHHHHHTT-T----CEEEEEESS
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCC----HHHHHHHhc-C----CeEEEEeCC
Confidence 355677665 55678999999988 355667766 2 589999864
No 91
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=58.73 E-value=27 Score=31.21 Aligned_cols=101 Identities=13% Similarity=0.105 Sum_probs=53.6
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
.-+|+|+|.|.|.-...++ +. ++ .++|||+... ..++.+.+++.+ .+..++|... .++++.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~---~~-~~----~~v~~vD~s~----~~~~~a~~~~~~----~~~~~~~~~~---d~~~~~ 84 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIF---VE-DG----YKTYGIEISD----LQLKKAENFSRE----NNFKLNISKG---DIRKLP 84 (209)
T ss_dssp CSEEEEESCCSSSCTHHHH---HH-TT----CEEEEEECCH----HHHHHHHHHHHH----HTCCCCEEEC---CTTSCC
T ss_pred CCEEEEECCCCCHHHHHHH---Hh-CC----CEEEEEECCH----HHHHHHHHHHHh----cCCceEEEEC---chhhCC
Confidence 3479999999886544333 22 22 3899998652 445555444332 2333444322 222222
Q ss_pred ccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 338 PWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 338 ~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
..++ +.|+.+ ..+||+.. .....+|+.+ +.|+|.-++++.
T Consensus 85 -----~~~~~fD~v~~~--~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 85 -----FKDESMSFVYSY--GTIFHMRK------NDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp -----SCTTCEEEEEEC--SCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCCceeEEEEc--ChHHhCCH------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 2223 334333 34677632 3456677655 668998665543
No 92
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=58.54 E-value=19 Score=36.08 Aligned_cols=114 Identities=17% Similarity=0.157 Sum_probs=62.7
Q ss_pred HHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eE
Q 009607 246 NQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RF 323 (531)
Q Consensus 246 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pF 323 (531)
.++|++.+.-.+.-+|+|+|.|.|. |...++.+. .-++|||+... .++.+ .+.++..|+ ..
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s~-----~~~~a----~~~~~~~~l~~~v 101 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAST-----MAQHA----EVLVKSNNLTDRI 101 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECST-----HHHHH----HHHHHHTTCTTTE
T ss_pred HHHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCHH-----HHHHH----HHHHHHcCCCCcE
Confidence 3678887765555689999999885 455566552 24999998641 23322 233334454 24
Q ss_pred EEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcCCcEEEEEe
Q 009607 324 TFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVE 390 (531)
Q Consensus 324 eF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~PkIvtlvE 390 (531)
+|.. . .++++.. . ..=+.|+.+.+ ++|+.. +...+.+...-+-|+|.-+++.+
T Consensus 102 ~~~~--~-d~~~~~~---~-~~~D~Ivs~~~--~~~~~~-----~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 102 VVIP--G-KVEEVSL---P-EQVDIIISEPM--GYMLFN-----ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEE--S-CTTTCCC---S-SCEEEEEECCC--BTTBTT-----TSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEE--c-chhhCCC---C-CceeEEEEeCc--hhcCCh-----HHHHHHHHHHHhhcCCCeEEEEe
Confidence 5432 2 3344321 1 01134444433 455543 23445555555778999887744
No 93
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=58.20 E-value=21 Score=32.88 Aligned_cols=31 Identities=13% Similarity=0.067 Sum_probs=23.3
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
.-+|+|+|.|.|. +...|+.+ + .++|||+..
T Consensus 49 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s 79 (226)
T 3m33_A 49 QTRVLEAGCGHGP----DAARFGPQ-A----ARWAAYDFS 79 (226)
T ss_dssp TCEEEEESCTTSH----HHHHHGGG-S----SEEEEEESC
T ss_pred CCeEEEeCCCCCH----HHHHHHHc-C----CEEEEEECC
Confidence 3479999999986 55666766 2 399999864
No 94
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=57.96 E-value=30 Score=31.03 Aligned_cols=45 Identities=36% Similarity=0.473 Sum_probs=33.2
Q ss_pred HHHHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 244 TANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 244 tANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
...+.|++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+..
T Consensus 39 ~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s 83 (227)
T 3e8s_A 39 VTDQAILLAILGRQPERVLDLGCGEGW----LLRALADR--G---IEAVGVDGD 83 (227)
T ss_dssp THHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT--T---CEEEEEESC
T ss_pred cccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC--C---CEEEEEcCC
Confidence 355667777776666899999999983 55667766 2 389999865
No 95
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=57.42 E-value=39 Score=30.84 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=58.5
Q ss_pred HHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEe
Q 009607 249 ILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGV 328 (531)
Q Consensus 249 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v 328 (531)
|++.+... -.|+|+|.|.|. +...|+.+ .++|||+... ..++...+++. ..+...+|...
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s~----~~~~~a~~~~~----~~~~~~~~~~~ 86 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLSE----EMLEIAQEKAM----ETNRHVDFWVQ 86 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESCH----HHHHHHHHHHH----HTTCCCEEEEC
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECCH----HHHHHHHHhhh----hcCCceEEEEc
Confidence 44444432 479999999885 44556655 4999998642 44554444432 33444455332
Q ss_pred ccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 329 AASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 329 ~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
.+.++. +. ..=+.|+.++ ..+||+.. +.....+|+.+ +-|+|.-.++++
T Consensus 87 ---d~~~~~---~~-~~fD~v~~~~-~~~~~~~~-----~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 87 ---DMRELE---LP-EPVDAITILC-DSLNYLQT-----EADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ---CGGGCC---CS-SCEEEEEECT-TGGGGCCS-----HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---ChhhcC---CC-CCcCEEEEeC-CchhhcCC-----HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 222221 11 1113343332 14677643 23455667665 567998777764
No 96
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=56.20 E-value=47 Score=29.45 Aligned_cols=54 Identities=22% Similarity=0.157 Sum_probs=31.1
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eEEEE
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RFTFR 326 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pFeF~ 326 (531)
-.|+|+|.|.|. +...|+.+-+ |.-++|||+.. ...++.+.++ ++..|+ .++|.
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~s----~~~~~~a~~~----~~~~~~~~~v~~~ 79 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDIQ----DKAIANTTKK----LTDLNLIDRVTLI 79 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECSC----HHHHHHHHHH----HHHTTCGGGEEEE
T ss_pred CEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEECC----HHHHHHHHHH----HHHcCCCCCeEEE
Confidence 379999999983 3334444421 22399999864 2445554444 344455 45553
No 97
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=55.65 E-value=41 Score=29.30 Aligned_cols=106 Identities=13% Similarity=0.062 Sum_probs=58.4
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EEEEEeccCCccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FTFRGVAASRLED 335 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--FeF~~v~~~~led 335 (531)
.-.|+|+|.|.|. +...|+.++ .-++|||+.. ...++.+. +.++..|++ .+|.. . .+.+
T Consensus 32 ~~~vLDlGcG~G~----~~~~l~~~~----~~~v~~vD~~----~~~~~~a~----~~~~~~~~~~~~~~~~--~-d~~~ 92 (177)
T 2esr_A 32 GGRVLDLFAGSGG----LAIEAVSRG----MSAAVLVEKN----RKAQAIIQ----DNIIMTKAENRFTLLK--M-EAER 92 (177)
T ss_dssp SCEEEEETCTTCH----HHHHHHHTT----CCEEEEECCC----HHHHHHHH----HHHHTTTCGGGEEEEC--S-CHHH
T ss_pred CCeEEEeCCCCCH----HHHHHHHcC----CCEEEEEECC----HHHHHHHH----HHHHHcCCCCceEEEE--C-cHHH
Confidence 3479999999885 334455552 2589999864 24444443 334455654 55532 2 2222
Q ss_pred ccccccccCC-CCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH---HhcCCcEEEEEecCCCCC
Q 009607 336 VKPWMLQVSP-KEALAVNSILQLHKLLGSDPARNSPMEMVLGWI---RNLNPKIMTVVEQESNHN 396 (531)
Q Consensus 336 l~~~~L~i~~-gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I---r~L~PkIvtlvEqEanhN 396 (531)
..+ .... =+.|+.|..+... ..+.++..+ +-|+|.-+++++......
T Consensus 93 ~~~---~~~~~fD~i~~~~~~~~~-----------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 93 AID---CLTGRFDLVFLDPPYAKE-----------TIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp HHH---HBCSCEEEEEECCSSHHH-----------HHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred hHH---hhcCCCCEEEECCCCCcc-----------hHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 110 0111 1466777654221 234566666 668999888877665544
No 98
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=54.50 E-value=26 Score=35.44 Aligned_cols=133 Identities=11% Similarity=0.024 Sum_probs=71.0
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhC-CceEEEEEeccCCcccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSV-NIRFTFRGVAASRLEDV 336 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~l-gvpFeF~~v~~~~ledl 336 (531)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.. ...++...+++.+++..+ +-.++|.. . ...+.
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~---~~~~~V~~VDis----~~~l~~Ar~~~~~~~~gl~~~rv~~~~--~-D~~~~ 186 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARH---ASIEQIDMCEID----KMVVDVSKQFFPDVAIGYEDPRVNLVI--G-DGVAF 186 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTC---TTCCEEEEEESC----HHHHHHHHHHCHHHHGGGGSTTEEEEE--S-CHHHH
T ss_pred CCEEEEECCCccH----HHHHHHHc---CCCCEEEEEECC----HHHHHHHHHHHHhhccccCCCcEEEEE--C-CHHHH
Confidence 3489999999885 55666665 345799999864 356666666666554333 12344432 2 11111
Q ss_pred cccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCcchHHHHHHHHHHHHH
Q 009607 337 KPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYST 413 (531)
Q Consensus 337 ~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqEanhN~p~F~~RF~eAL~yYsa 413 (531)
-+ ....+ +.|++|+....|... .-....+++.+ +.|+|.-++++.-+.-...+.. +.+.+.-...
T Consensus 187 l~---~~~~~~fDlIi~d~~~p~~~~~------~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~---~~~~~~~l~~ 254 (334)
T 1xj5_A 187 LK---NAAEGSYDAVIVDSSDPIGPAK------ELFEKPFFQSVARALRPGGVVCTQAESLWLHMDI---IEDIVSNCRE 254 (334)
T ss_dssp HH---TSCTTCEEEEEECCCCTTSGGG------GGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHH---HHHHHHHHHH
T ss_pred HH---hccCCCccEEEECCCCccCcch------hhhHHHHHHHHHHhcCCCcEEEEecCCccccHHH---HHHHHHHHHH
Confidence 00 01112 466766542222100 00124566655 6689999888876655444433 3334444456
Q ss_pred Hhh
Q 009607 414 MFD 416 (531)
Q Consensus 414 lFD 416 (531)
+|.
T Consensus 255 ~F~ 257 (334)
T 1xj5_A 255 IFK 257 (334)
T ss_dssp HCS
T ss_pred hCc
Confidence 666
No 99
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=53.66 E-value=23 Score=32.36 Aligned_cols=32 Identities=13% Similarity=-0.026 Sum_probs=22.6
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
+.-+|+|+|.|.|. +...||.+ | .++|||+..
T Consensus 22 ~~~~vLD~GCG~G~----~~~~la~~-g----~~V~gvD~S 53 (203)
T 1pjz_A 22 PGARVLVPLCGKSQ----DMSWLSGQ-G----YHVVGAELS 53 (203)
T ss_dssp TTCEEEETTTCCSH----HHHHHHHH-C----CEEEEEEEC
T ss_pred CCCEEEEeCCCCcH----hHHHHHHC-C----CeEEEEeCC
Confidence 44579999999884 34446655 2 389999865
No 100
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=53.63 E-value=8.5 Score=37.78 Aligned_cols=42 Identities=14% Similarity=-0.030 Sum_probs=29.4
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
..|++.+.-.+.-+|+|+|.|.|. +-..||.+ + -++|||+..
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~S 76 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDFS 76 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEESC
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEECC
Confidence 346666655556689999999885 44556665 2 289999865
No 101
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=53.44 E-value=1.2e+02 Score=26.77 Aligned_cols=97 Identities=16% Similarity=0.138 Sum_probs=52.1
Q ss_pred EEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccccc
Q 009607 260 HVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVKPW 339 (531)
Q Consensus 260 HIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~~~ 339 (531)
.|+|+|.|.|. +...|+.+ + .++|||+... ..++.+.+++. ..++..+|... .+.++.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~-~----~~v~~vD~s~----~~~~~a~~~~~----~~~~~~~~~~~---d~~~~~-- 89 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL-G----YEVTAVDQSS----VGLAKAKQLAQ----EKGVKITTVQS---NLADFD-- 89 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT-T----CEEEEECSSH----HHHHHHHHHHH----HHTCCEEEECC---BTTTBS--
T ss_pred CEEEECCCCCH----hHHHHHhC-C----CeEEEEECCH----HHHHHHHHHHH----hcCCceEEEEc---ChhhcC--
Confidence 89999998875 34556655 2 3999998642 44554444433 33555555432 223222
Q ss_pred ccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEec
Q 009607 340 MLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQ 391 (531)
Q Consensus 340 ~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEq 391 (531)
..++ +.|+.+. .|+. ......+|+.+ +.|+|.-.+++..
T Consensus 90 ---~~~~~fD~v~~~~----~~~~------~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 90 ---IVADAWEGIVSIF----CHLP------SSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp ---CCTTTCSEEEEEC----CCCC------HHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred ---CCcCCccEEEEEh----hcCC------HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 1122 4444432 2221 13456677666 5579986655543
No 102
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=53.39 E-value=62 Score=30.44 Aligned_cols=105 Identities=15% Similarity=0.199 Sum_probs=55.3
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eEEEEEeccCCcc
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RFTFRGVAASRLE 334 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pFeF~~v~~~~le 334 (531)
+.-+|+|+|.|.|.--.. |+.++ ..++|||+... ..++...++ ++..++ ..+|.. . .+.
T Consensus 64 ~~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s~----~~~~~a~~~----~~~~~~~~~v~~~~--~-d~~ 124 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIAE----VSINDARVR----ARNMKRRFKVFFRA--Q-DSY 124 (298)
T ss_dssp TTCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESCH----HHHHHHHHH----HHTSCCSSEEEEEE--S-CTT
T ss_pred CCCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECCH----HHHHHHHHH----HHhcCCCccEEEEE--C-Ccc
Confidence 345899999999864333 44332 23899998642 344444433 334454 344432 2 233
Q ss_pred cccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 335 DVKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 335 dl~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
++. +. .++ +.|+.+. .||++.. .......+|+.+ +-|+|.-.+++.
T Consensus 125 ~~~---~~-~~~~fD~v~~~~--~l~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 125 GRH---MD-LGKEFDVISSQF--SFHYAFS----TSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp TSC---CC-CSSCEEEEEEES--CGGGGGS----SHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccc---cC-CCCCcCEEEECc--hhhhhcC----CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 221 10 122 3444443 4677533 123456677665 567998665554
No 103
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=52.64 E-value=23 Score=32.83 Aligned_cols=101 Identities=15% Similarity=0.152 Sum_probs=54.7
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhC-CceEEEEEeccCCccc
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSV-NIRFTFRGVAASRLED 335 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~l-gvpFeF~~v~~~~led 335 (531)
+.-.|+|+|.|.|. +...|+.+. ..++|||+... ..++.+.+++. .. +...+|... .+++
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s~----~~~~~a~~~~~----~~~~~~~~~~~~---d~~~ 139 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDITE----DFLVQAKTYLG----EEGKRVRNYFCC---GLQD 139 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESCH----HHHHHHHHHTG----GGGGGEEEEEEC---CGGG
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCCH----HHHHHHHHHhh----hcCCceEEEEEc---Chhh
Confidence 35689999999885 444555543 23899998642 34444443332 22 223455322 2333
Q ss_pred ccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 336 VKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 336 l~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
+. ...+ +.|+.+ ..|||+.+ ..+..+|+.+ +-|+|.-++++
T Consensus 140 ~~-----~~~~~fD~v~~~--~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 140 FT-----PEPDSYDVIWIQ--WVIGHLTD------QHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp CC-----CCSSCEEEEEEE--SCGGGSCH------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred cC-----CCCCCEEEEEEc--chhhhCCH------HHHHHHHHHHHHhcCCCeEEEE
Confidence 22 1222 344444 45788744 2355677665 56899765444
No 104
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=52.10 E-value=28 Score=35.39 Aligned_cols=115 Identities=16% Similarity=0.129 Sum_probs=65.2
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FT 324 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--Fe 324 (531)
++|++...-.+.-.|+|+|.|.| .+...|+.+ |. -++|||+.. . .++.+ .+.++..|++ .+
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g~--~~V~gvD~s-~----~~~~a----~~~~~~~~~~~~v~ 115 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--GA--RKVYAVEAT-K----MADHA----RALVKANNLDHIVE 115 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--TC--SEEEEEESS-T----THHHH----HHHHHHTTCTTTEE
T ss_pred HHHHhccccCCCCEEEEeccCcC----HHHHHHHhc--CC--CEEEEEccH-H----HHHHH----HHHHHHcCCCCeEE
Confidence 44555544445568999999998 344455655 22 299999865 2 23333 3344555654 55
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecC
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQE 392 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqE 392 (531)
|.. ..++++... ..=+.|+.|.+ .|.+.. ...++.+|+.+ |-|+|.-+++...-
T Consensus 116 ~~~---~d~~~~~~~----~~~D~Iv~~~~--~~~l~~-----e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 116 VIE---GSVEDISLP----EKVDVIISEWM--GYFLLR-----ESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EEE---SCGGGCCCS----SCEEEEEECCC--BTTBTT-----TCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred EEE---CchhhcCcC----CcceEEEEcCh--hhcccc-----hHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 532 234444321 11145555543 333332 35578899888 78999988766543
No 105
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=51.70 E-value=21 Score=38.01 Aligned_cols=114 Identities=16% Similarity=0.119 Sum_probs=63.6
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FT 324 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--Fe 324 (531)
.+|++.+...+.-+|+|+|.|.|. +...||.++ ..++|||+.+ ..++ ...+.++..|+. .+
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~~----~~~V~gvD~s-----~~l~----~A~~~~~~~gl~~~v~ 210 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAS-----TMAQ----HAEVLVKSNNLTDRIV 210 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHTT----CSEEEEEECH-----HHHH----HHHHHHHHTTCTTTEE
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHcC----CCEEEEEEcH-----HHHH----HHHHHHHHcCCCCcEE
Confidence 467777654455689999999885 444566652 3599999753 2232 223444555653 55
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcCCcEEEEEec
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQ 391 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~PkIvtlvEq 391 (531)
|..- .++++.. . ..=+.|+.|.+ ++++.. ....+.+...-+-|+|.-+++.+.
T Consensus 211 ~~~~---d~~~~~~---~-~~fD~Ivs~~~--~~~~~~-----e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 211 VIPG---KVEEVSL---P-EQVDIIISEPM--GYMLFN-----ERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EEES---CTTTCCC---S-SCEEEEECCCC--HHHHTC-----HHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEEC---chhhCcc---C-CCeEEEEEeCc--hHhcCc-----HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 5422 3444321 0 11145555544 455543 123444554557789998887554
No 106
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=50.61 E-value=21 Score=32.87 Aligned_cols=113 Identities=14% Similarity=0.106 Sum_probs=55.8
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EEEEEecc-CCccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FTFRGVAA-SRLED 335 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--FeF~~v~~-~~led 335 (531)
-+|+|+|.+.|.-= ..||.+- ++.-++|+|+... ..++.+.+++ +..|+. ++|..--+ +.+..
T Consensus 60 ~~vLdiG~G~G~~~----~~la~~~--~~~~~v~~vD~~~----~~~~~a~~~~----~~~~~~~~v~~~~~d~~~~l~~ 125 (221)
T 3u81_A 60 SLVLELGAYCGYSA----VRMARLL--QPGARLLTMEINP----DCAAITQQML----NFAGLQDKVTILNGASQDLIPQ 125 (221)
T ss_dssp SEEEEECCTTSHHH----HHHHTTS--CTTCEEEEEESCH----HHHHHHHHHH----HHHTCGGGEEEEESCHHHHGGG
T ss_pred CEEEEECCCCCHHH----HHHHHhC--CCCCEEEEEeCCh----HHHHHHHHHH----HHcCCCCceEEEECCHHHHHHH
Confidence 47999999988532 2344331 2345999998642 4455444433 334543 55532211 01111
Q ss_pred ccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcCCcEEEEEecCCCCC
Q 009607 336 VKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHN 396 (531)
Q Consensus 336 l~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~PkIvtlvEqEanhN 396 (531)
+.. ......=+.|.++... |+.. +...++..++-|+|.-+++++.-.-++
T Consensus 126 ~~~-~~~~~~fD~V~~d~~~--~~~~--------~~~~~~~~~~~LkpgG~lv~~~~~~~~ 175 (221)
T 3u81_A 126 LKK-KYDVDTLDMVFLDHWK--DRYL--------PDTLLLEKCGLLRKGTVLLADNVIVPG 175 (221)
T ss_dssp TTT-TSCCCCCSEEEECSCG--GGHH--------HHHHHHHHTTCCCTTCEEEESCCCCCC
T ss_pred HHH-hcCCCceEEEEEcCCc--ccch--------HHHHHHHhccccCCCeEEEEeCCCCcc
Confidence 110 0000111466665432 2221 122455555889999988876544333
No 107
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=50.46 E-value=24 Score=33.76 Aligned_cols=23 Identities=17% Similarity=0.208 Sum_probs=18.6
Q ss_pred cccchhhHHHHHhcCCceeccCC
Q 009607 452 RHEPLAKWRNRLAGAGFRPLHLG 474 (531)
Q Consensus 452 RhE~~~~Wr~rm~~AGF~~vpls 474 (531)
+.-+.+.|+..|+.+||+.+.+.
T Consensus 232 ~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 232 VPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp CCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCHHHHHHHHHHcCCeEEEee
Confidence 44567899999999999987754
No 108
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=49.53 E-value=62 Score=30.22 Aligned_cols=108 Identities=15% Similarity=0.130 Sum_probs=55.3
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce-EEEEEeccCCccc
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR-FTFRGVAASRLED 335 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp-FeF~~v~~~~led 335 (531)
..=+|+|+|.|.| .+...||.+. |..++|||+... ..+-+...+..+-++..|++ .+|..- ..++
T Consensus 24 ~~~~vLDiGCG~G----~~~~~la~~~---~~~~v~GvD~s~----~~ml~~A~~A~~~~~~~~~~~v~~~~~---d~~~ 89 (225)
T 3p2e_A 24 FDRVHIDLGTGDG----RNIYKLAIND---QNTFYIGIDPVK----ENLFDISKKIIKKPSKGGLSNVVFVIA---AAES 89 (225)
T ss_dssp CSEEEEEETCTTS----HHHHHHHHTC---TTEEEEEECSCC----GGGHHHHHHHTSCGGGTCCSSEEEECC---BTTB
T ss_pred CCCEEEEEeccCc----HHHHHHHHhC---CCCEEEEEeCCH----HHHHHHHHHHHHHHHHcCCCCeEEEEc---CHHH
Confidence 3447999999988 3555666552 457999998753 22322222222233345553 566432 3444
Q ss_pred ccccccccCCCCeEEeehHHH----hhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 336 VKPWMLQVSPKEALAVNSILQ----LHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 336 l~~~~L~i~~gEaLaVN~~f~----LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
+. ..+ .+-+..|.+.|. +++... .. ..+|+.+ |-|+|.-.+++
T Consensus 90 l~-~~~---~d~v~~i~~~~~~~~~~~~~~~------~~-~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 90 LP-FEL---KNIADSISILFPWGTLLEYVIK------PN-RDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp CC-GGG---TTCEEEEEEESCCHHHHHHHHT------TC-HHHHHHHHTTEEEEEEEEE
T ss_pred hh-hhc---cCeEEEEEEeCCCcHHhhhhhc------ch-HHHHHHHHHhcCCCcEEEE
Confidence 42 111 133333433322 223222 12 3466555 56899877666
No 109
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=49.40 E-value=40 Score=32.32 Aligned_cols=32 Identities=16% Similarity=0.082 Sum_probs=23.8
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
+.-.|+|+|.|.|. ++..||.+ | .++|||+..
T Consensus 68 ~~~~vLD~GCG~G~----~~~~La~~--G---~~V~gvD~S 99 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI----EMKWFADR--G---HTVVGVEIS 99 (252)
T ss_dssp CSCEEEETTCTTCT----HHHHHHHT--T---CEEEEECSC
T ss_pred CCCeEEEeCCCCcH----HHHHHHHC--C---CeEEEEECC
Confidence 44589999999885 35567766 3 389999875
No 110
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=47.84 E-value=44 Score=35.57 Aligned_cols=120 Identities=10% Similarity=0.033 Sum_probs=65.1
Q ss_pred HHHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHH---HHHHhCCc
Q 009607 245 ANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLA---ELARSVNI 321 (531)
Q Consensus 245 ANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~---~fA~~lgv 321 (531)
.-..|++.+.-...=+|+|+|.|.|. +.-.+|.+.+ .-+++||+... ..++.+.+.+. +.++..|+
T Consensus 161 ~i~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDiS~----~~lelAr~n~e~frkr~~~~Gl 229 (438)
T 3uwp_A 161 LVAQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEKAD----IPAKYAETMDREFRKWMKWYGK 229 (438)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEECCH----HHHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeCCH----HHHHHHHHHHHHHHHHHHHhCC
Confidence 34557777765566679999999884 3334454432 23899998642 23333333332 23455565
Q ss_pred ---eEEEEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcCCcEEEEE
Q 009607 322 ---RFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVV 389 (531)
Q Consensus 322 ---pFeF~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~PkIvtlv 389 (531)
.++|. .. .+.++.... .+..-.+|++|+.+ + . +.....+....|.|+|.-.+++
T Consensus 230 ~~~rVefi--~G-D~~~lp~~d-~~~~aDVVf~Nn~~--F---~-----pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 230 KHAEYTLE--RG-DFLSEEWRE-RIANTSVIFVNNFA--F---G-----PEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp CCCEEEEE--EC-CTTSHHHHH-HHHTCSEEEECCTT--C---C-----HHHHHHHHHHHTTSCTTCEEEE
T ss_pred CCCCeEEE--EC-cccCCcccc-ccCCccEEEEcccc--c---C-----chHHHHHHHHHHcCCCCcEEEE
Confidence 45553 22 333332110 01123577778753 1 1 2445556567788999876554
No 111
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=47.26 E-value=40 Score=33.80 Aligned_cols=103 Identities=16% Similarity=0.127 Sum_probs=59.5
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EEEEEeccCCcccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FTFRGVAASRLEDV 336 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--FeF~~v~~~~ledl 336 (531)
-.|+|+|.|.|. +...|+.+ +.-+++||+.. +.++.+. +.++..|++ .+|..- .++++
T Consensus 68 ~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s-----~~l~~a~----~~~~~~~~~~~v~~~~~---d~~~~ 127 (349)
T 3q7e_A 68 KVVLDVGSGTGI----LCMFAAKA----GARKVIGIECS-----SISDYAV----KIVKANKLDHVVTIIKG---KVEEV 127 (349)
T ss_dssp CEEEEESCTTSH----HHHHHHHT----TCSEEEEEECS-----THHHHHH----HHHHHTTCTTTEEEEES---CTTTC
T ss_pred CEEEEEeccchH----HHHHHHHC----CCCEEEEECcH-----HHHHHHH----HHHHHcCCCCcEEEEEC---cHHHc
Confidence 469999999984 45556666 23599999864 1343333 344455655 566432 34443
Q ss_pred cccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecCC
Q 009607 337 KPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQES 393 (531)
Q Consensus 337 ~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqEa 393 (531)
. +..+ +.|+.+.+ .|.+.. ....+.+|..+ |-|+|.-+++.+...
T Consensus 128 ~-----~~~~~fD~Iis~~~--~~~l~~-----~~~~~~~l~~~~r~LkpgG~li~~~~~ 175 (349)
T 3q7e_A 128 E-----LPVEKVDIIISEWM--GYCLFY-----ESMLNTVLHARDKWLAPDGLIFPDRAT 175 (349)
T ss_dssp C-----CSSSCEEEEEECCC--BBTBTB-----TCCHHHHHHHHHHHEEEEEEEESCEEE
T ss_pred c-----CCCCceEEEEEccc--cccccC-----chhHHHHHHHHHHhCCCCCEEccccce
Confidence 2 1112 45555543 222322 35577888877 778999887754433
No 112
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=47.10 E-value=34 Score=30.70 Aligned_cols=38 Identities=13% Similarity=0.175 Sum_probs=23.8
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
.+++.+.. +.-.|+|+|.|.|. +...| +. -++|||+..
T Consensus 28 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l----~~---~~v~~vD~s 65 (211)
T 2gs9_A 28 RALKGLLP-PGESLLEVGAGTGY----WLRRL----PY---PQKVGVEPS 65 (211)
T ss_dssp HHHHTTCC-CCSEEEEETCTTCH----HHHHC----CC---SEEEEECCC
T ss_pred HHHHHhcC-CCCeEEEECCCCCH----hHHhC----CC---CeEEEEeCC
Confidence 34444443 55689999999884 22233 11 289999864
No 113
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=46.29 E-value=46 Score=32.89 Aligned_cols=134 Identities=10% Similarity=0.082 Sum_probs=69.4
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhC-CceEEEEEeccCCccccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSV-NIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~l-gvpFeF~~v~~~~ledl~ 337 (531)
-+|+|+|.|.|. +...|+.+ +|.-+||+|+.. ...++...+++.+.+..+ +-.+++.. .+-.+-+.
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid----~~~i~~ar~~~~~~~~~~~~~rv~v~~--~Da~~~l~ 163 (304)
T 2o07_A 97 RKVLIIGGGDGG----VLREVVKH---PSVESVVQCEID----EDVIQVSKKFLPGMAIGYSSSKLTLHV--GDGFEFMK 163 (304)
T ss_dssp CEEEEEECTTSH----HHHHHTTC---TTCCEEEEEESC----HHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHHHHH
T ss_pred CEEEEECCCchH----HHHHHHHc---CCCCEEEEEECC----HHHHHHHHHHhHHhhcccCCCcEEEEE--CcHHHHHh
Confidence 479999999885 55566665 345799999864 355666666665554333 22344432 11111011
Q ss_pred ccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCcchHHHHHHHHHHHHHH
Q 009607 338 PWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTM 414 (531)
Q Consensus 338 ~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqEanhN~p~F~~RF~eAL~yYsal 414 (531)
..++ +.|++++..... .. ..-....+++.+ +.|+|.-+++++.......+. .+.+...+...+
T Consensus 164 -----~~~~~fD~Ii~d~~~~~~--~~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~---~~~~~~~~l~~~ 229 (304)
T 2o07_A 164 -----QNQDAFDVIITDSSDPMG--PA----ESLFKESYYQLMKTALKEDGVLCCQGECQWLHLD---LIKEMRQFCQSL 229 (304)
T ss_dssp -----TCSSCEEEEEEECC-----------------CHHHHHHHHHEEEEEEEEEEEECTTTCHH---HHHHHHHHHHHH
T ss_pred -----hCCCCceEEEECCCCCCC--cc----hhhhHHHHHHHHHhccCCCeEEEEecCCcccchH---HHHHHHHHHHHh
Confidence 0111 567777643211 00 001123566655 668999998887655433333 233334455566
Q ss_pred hhhhh
Q 009607 415 FDSLE 419 (531)
Q Consensus 415 FDSLe 419 (531)
|....
T Consensus 230 f~~v~ 234 (304)
T 2o07_A 230 FPVVA 234 (304)
T ss_dssp CSEEE
T ss_pred CCCce
Confidence 66443
No 114
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=46.28 E-value=1.3e+02 Score=27.95 Aligned_cols=41 Identities=20% Similarity=0.224 Sum_probs=26.6
Q ss_pred HHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCC
Q 009607 246 NQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPP 297 (531)
Q Consensus 246 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p 297 (531)
-+.|.+.+. +.-.|+|+|.|.|. +...|+.+ + .++|||+..
T Consensus 45 ~~~l~~~~~--~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s 85 (260)
T 2avn_A 45 GSFLEEYLK--NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDPS 85 (260)
T ss_dssp HHHHHHHCC--SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEESC
T ss_pred HHHHHHhcC--CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeCC
Confidence 333444443 44589999999885 44556655 2 389999864
No 115
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=44.54 E-value=15 Score=39.61 Aligned_cols=83 Identities=20% Similarity=0.294 Sum_probs=50.0
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCC-ceEEEEEeccCCccc
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVN-IRFTFRGVAASRLED 335 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lg-vpFeF~~v~~~~led 335 (531)
+-+.|+|+|.|.|. |-..||.+ |. ++|||+... ..++... ..|+.-| +..+|+.. +.|+
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~-ga----~V~giD~~~----~~i~~a~----~~a~~~~~~~~~~~~~---~~~~ 125 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK-GA----TIVGIDFQQ----ENINVCR----ALAEENPDFAAEFRVG---RIEE 125 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT-TC----EEEEEESCH----HHHHHHH----HHHHTSTTSEEEEEEC---CHHH
T ss_pred CCCeEEEECCCCcH----HHHHHHhC-CC----EEEEECCCH----HHHHHHH----HHHHhcCCCceEEEEC---CHHH
Confidence 34789999999985 67778866 32 899998752 3333222 3344444 67777654 3344
Q ss_pred ccccccccCCCCeEEeehHHHhhhhcC
Q 009607 336 VKPWMLQVSPKEALAVNSILQLHKLLG 362 (531)
Q Consensus 336 l~~~~L~i~~gEaLaVN~~f~LH~L~~ 362 (531)
+.. ...++..=+|-|+-.|||+.+
T Consensus 126 ~~~---~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 126 VIA---ALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp HHH---HCCTTSCSEEEEESCHHHHHH
T ss_pred Hhh---hccCCCccEEEECcchhcCCC
Confidence 321 112344445556667899976
No 116
>1zs4_A Regulatory protein CII; helix-turn-helix, transcription activator, transcription-DNA; HET: DNA; 1.70A {Enterobacteria phage lambda} SCOP: a.35.1.9
Probab=44.14 E-value=9.2 Score=31.69 Aligned_cols=24 Identities=21% Similarity=0.333 Sum_probs=21.0
Q ss_pred hhhhhhhcCCcccchhHHHHHHHH
Q 009607 30 IDGLLAGAGYKVRSSELRQVAQRL 53 (531)
Q Consensus 30 ~d~~l~~~~~~~~~~~~~~~~~~l 53 (531)
+=.+|+++||||.+.||+.++++.
T Consensus 52 ~~~lLa~Lglkvv~~e~~~~~k~~ 75 (83)
T 1zs4_A 52 FSMLLAVLEWGVVDDDMARLARQV 75 (83)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCcHHHHHHHHHH
Confidence 446899999999999999999874
No 117
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=43.87 E-value=67 Score=30.91 Aligned_cols=100 Identities=17% Similarity=0.154 Sum_probs=52.3
Q ss_pred EEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccccc
Q 009607 260 HVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVKPW 339 (531)
Q Consensus 260 HIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~~~ 339 (531)
.|+|+|.|.|. +...|+.+ + -++|||++.. ..+ +.|+.. -.++|..- ..+++
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~-~----~~v~gvD~s~----~ml--------~~a~~~-~~v~~~~~---~~e~~--- 93 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF-F----ERVHAVDPGE----AQI--------RQALRH-PRVTYAVA---PAEDT--- 93 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT-C----SEEEEEESCH----HHH--------HTCCCC-TTEEEEEC---CTTCC---
T ss_pred CEEEEcCCCCH----HHHHHHHh-C----CEEEEEeCcH----Hhh--------hhhhhc-CCceeehh---hhhhh---
Confidence 58999999985 34455654 2 2899998752 222 223332 12344322 33333
Q ss_pred ccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEE-EEecCCCCCCc
Q 009607 340 MLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMT-VVEQESNHNQP 398 (531)
Q Consensus 340 ~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvt-lvEqEanhN~p 398 (531)
.+.++..=+|-|...||++ + .+.+|+.+ |-|+|.-++ ++........|
T Consensus 94 --~~~~~sfD~v~~~~~~h~~-~--------~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~ 143 (257)
T 4hg2_A 94 --GLPPASVDVAIAAQAMHWF-D--------LDRFWAELRRVARPGAVFAAVTYGLTRVDP 143 (257)
T ss_dssp --CCCSSCEEEEEECSCCTTC-C--------HHHHHHHHHHHEEEEEEEEEEEECCCBCCH
T ss_pred --cccCCcccEEEEeeehhHh-h--------HHHHHHHHHHHcCCCCEEEEEECCCCCCCH
Confidence 2334433333344456764 2 34567655 567998764 44443333334
No 118
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=43.71 E-value=52 Score=29.88 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=55.8
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc-eEEEEEeccCCcccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI-RFTFRGVAASRLEDV 336 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv-pFeF~~v~~~~ledl 336 (531)
.-.|+|+|.|.|. +...||.+. |..++|||+.. ...++.+.+++ +..|+ ..+|..- .+.++
T Consensus 42 ~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~s----~~~l~~a~~~~----~~~~~~~v~~~~~---d~~~~ 103 (214)
T 1yzh_A 42 NPIHVEVGSGKGA----FVSGMAKQN---PDINYIGIDIQ----KSVLSYALDKV----LEVGVPNIKLLWV---DGSDL 103 (214)
T ss_dssp CCEEEEESCTTSH----HHHHHHHHC---TTSEEEEEESC----HHHHHHHHHHH----HHHCCSSEEEEEC---CSSCG
T ss_pred CCeEEEEccCcCH----HHHHHHHHC---CCCCEEEEEcC----HHHHHHHHHHH----HHcCCCCEEEEeC---CHHHH
Confidence 4469999999884 334455442 34699999864 24555544443 33344 3455322 22222
Q ss_pred cccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHHH-hcCCcEEEEEecC
Q 009607 337 KPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWIR-NLNPKIMTVVEQE 392 (531)
Q Consensus 337 ~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir-~L~PkIvtlvEqE 392 (531)
.. . +.++ +.|++|... +........+......+|..++ .|+|.-+++++-+
T Consensus 104 ~~-~--~~~~~~D~i~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 104 TD-Y--FEDGEIDRLYLNFSD--PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp GG-T--SCTTCCSEEEEESCC--CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred Hh-h--cCCCCCCEEEEECCC--CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 10 0 1222 567777431 0000000000011356777665 5899977777543
No 119
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=43.68 E-value=39 Score=30.75 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=54.9
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc-eEEEEEeccCCccccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI-RFTFRGVAASRLEDVK 337 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv-pFeF~~v~~~~ledl~ 337 (531)
-+|+|+|.|.|.--.. ++.+ + . -++|||+.. ...++.+.++ ++..++ ..+|.. . ...++.
T Consensus 56 ~~vLDlgcG~G~~~~~----l~~~-~-~--~~V~~vD~s----~~~l~~a~~~----~~~~~~~~v~~~~--~-D~~~~~ 116 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLE----ALSR-Y-A--AGATLIEMD----RAVSQQLIKN----LATLKAGNARVVN--S-NAMSFL 116 (202)
T ss_dssp CEEEETTCTTCHHHHH----HHHT-T-C--SEEEEECSC----HHHHHHHHHH----HHHTTCCSEEEEC--S-CHHHHH
T ss_pred CeEEEeCCCcCHHHHH----HHhc-C-C--CEEEEEECC----HHHHHHHHHH----HHHcCCCcEEEEE--C-CHHHHH
Confidence 3799999998853322 2333 2 1 289999864 2445544443 344555 455532 2 222211
Q ss_pred ccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHh---cCCcEEEEEecCC
Q 009607 338 PWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWIRN---LNPKIMTVVEQES 393 (531)
Q Consensus 338 ~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~---L~PkIvtlvEqEa 393 (531)
+ ...+ +.|++|..| | ....+.+++.+++ |+|.-+++++...
T Consensus 117 ~----~~~~~fD~V~~~~p~--~---------~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 117 A----QKGTPHNIVFVDPPF--R---------RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp S----SCCCCEEEEEECCSS--S---------TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred h----hcCCCCCEEEECCCC--C---------CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1 0111 456666543 2 1335678888876 9999777776543
No 120
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=41.76 E-value=1e+02 Score=27.87 Aligned_cols=106 Identities=14% Similarity=0.105 Sum_probs=56.5
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc---eEEEEEeccCCccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI---RFTFRGVAASRLED 335 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv---pFeF~~v~~~~led 335 (531)
-.|+|+|.|.|.-- ..++.+ + . -++|||+.. ...++.+.+++ +..|+ ..+|.. . ...+
T Consensus 55 ~~vLDlGcGtG~~~----~~~~~~-~-~--~~v~gvD~s----~~~l~~a~~~~----~~~~~~~~~v~~~~--~-d~~~ 115 (201)
T 2ift_A 55 SECLDGFAGSGSLG----FEALSR-Q-A--KKVTFLELD----KTVANQLKKNL----QTLKCSSEQAEVIN--Q-SSLD 115 (201)
T ss_dssp CEEEETTCTTCHHH----HHHHHT-T-C--SEEEEECSC----HHHHHHHHHHH----HHTTCCTTTEEEEC--S-CHHH
T ss_pred CeEEEcCCccCHHH----HHHHHc-c-C--CEEEEEECC----HHHHHHHHHHH----HHhCCCccceEEEE--C-CHHH
Confidence 36999999988432 223333 2 1 389999864 24555554443 34455 355532 2 2222
Q ss_pred ccccccccCC-CCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHh---cCCcEEEEEecCCCC
Q 009607 336 VKPWMLQVSP-KEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRN---LNPKIMTVVEQESNH 395 (531)
Q Consensus 336 l~~~~L~i~~-gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~---L~PkIvtlvEqEanh 395 (531)
+.+. +.-.. =+.|+.|..| | ....+.+|+.+.+ |+|.-+++++.....
T Consensus 116 ~~~~-~~~~~~fD~I~~~~~~--~---------~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 116 FLKQ-PQNQPHFDVVFLDPPF--H---------FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp HTTS-CCSSCCEEEEEECCCS--S---------SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HHHh-hccCCCCCEEEECCCC--C---------CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 1110 00011 1355555542 2 1456778888865 999987777665543
No 121
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=41.35 E-value=1.5e+02 Score=26.63 Aligned_cols=100 Identities=16% Similarity=0.205 Sum_probs=52.9
Q ss_pred CceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccc
Q 009607 256 HDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLED 335 (531)
Q Consensus 256 ~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~led 335 (531)
.+.-.|+|+|.|.|.-- ..|+.+ ++ ++|||+... ..++...+++ -++ +|... .+.+
T Consensus 39 ~~~~~vLdiG~G~G~~~----~~l~~~--~~---~v~~~D~s~----~~~~~a~~~~------~~~--~~~~~---d~~~ 94 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHL----EHFTKE--FG---DTAGLELSE----DMLTHARKRL------PDA--TLHQG---DMRD 94 (239)
T ss_dssp TTCCEEEEETCTTSHHH----HHHHHH--HS---EEEEEESCH----HHHHHHHHHC------TTC--EEEEC---CTTT
T ss_pred CCCCeEEEecccCCHHH----HHHHHh--CC---cEEEEeCCH----HHHHHHHHhC------CCC--EEEEC---CHHH
Confidence 34468999999998543 334433 22 899998642 3343333321 123 33322 2222
Q ss_pred ccccccccCCCC-eEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 336 VKPWMLQVSPKE-ALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 336 l~~~~L~i~~gE-aLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
+. . ++. -+|+.+.-.+||+.+ +.....+|+.+ +.|+|.-.++++
T Consensus 95 ~~-----~-~~~~D~v~~~~~~~~~~~~-----~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 95 FR-----L-GRKFSAVVSMFSSVGYLKT-----TEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp CC-----C-SSCEEEEEECTTGGGGCCS-----HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cc-----c-CCCCcEEEEcCchHhhcCC-----HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 22 1 222 233322225787743 23456677766 567999877765
No 122
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=41.13 E-value=54 Score=32.76 Aligned_cols=109 Identities=17% Similarity=0.106 Sum_probs=60.1
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eEE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RFT 324 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pFe 324 (531)
++|++.+.-.+.-.|+|+|.|.|. +...|+.+ | .-+++||+.. +.++.+.++ ++..|+ ..+
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g---~~~v~gvD~s-----~~~~~a~~~----~~~~~~~~~i~ 116 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA-G---AKKVLGVDQS-----EILYQAMDI----IRLNKLEDTIT 116 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT-T---CSEEEEEESS-----THHHHHHHH----HHHTTCTTTEE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc-C---CCEEEEEChH-----HHHHHHHHH----HHHcCCCCcEE
Confidence 566665544444589999999984 44456655 2 2489999864 134444333 333443 344
Q ss_pred EEEeccCCcccccccccccCCC--CeEEeehH-HHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEE
Q 009607 325 FRGVAASRLEDVKPWMLQVSPK--EALAVNSI-LQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTV 388 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~g--EaLaVN~~-f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtl 388 (531)
|.. . ..+++. +.++ +.|+.|.+ +.|++ ...++.+|+.+ |-|+|.-+++
T Consensus 117 ~~~--~-d~~~~~-----~~~~~~D~Ivs~~~~~~l~~--------~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 117 LIK--G-KIEEVH-----LPVEKVDVIISEWMGYFLLF--------ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEE--S-CTTTSC-----CSCSCEEEEEECCCBTTBTT--------TCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEE--e-eHHHhc-----CCCCcEEEEEEcCchhhccC--------HHHHHHHHHHHHhhcCCCcEEE
Confidence 432 2 333332 1112 45555542 22222 34567788776 6689987776
No 123
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=40.31 E-value=56 Score=32.34 Aligned_cols=113 Identities=21% Similarity=0.135 Sum_probs=58.1
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EEE
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FTF 325 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--FeF 325 (531)
+|++...-.+.-+|+|+|.|.|. +...++.+. .-+++||+.. ..++.+. +.++..|+. .+|
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~v~~vD~s-----~~~~~a~----~~~~~~~~~~~i~~ 91 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKHG----AKHVIGVDMS-----SIIEMAK----ELVELNGFSDKITL 91 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSH----HHHHHHHTC----CSEEEEEESS-----THHHHHH----HHHHHTTCTTTEEE
T ss_pred HHHhhHhhcCCCEEEEecCccHH----HHHHHHHCC----CCEEEEEChH-----HHHHHHH----HHHHHcCCCCCEEE
Confidence 44443332233489999999984 344555552 2489999864 1243333 333344542 444
Q ss_pred EEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 326 RGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 326 ~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
.. . ..+++. +....=+.|+.+.+ .+.+.. ...++.+|..+ |-|+|.-+++.+
T Consensus 92 ~~--~-d~~~~~---~~~~~~D~Ivs~~~--~~~l~~-----~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 92 LR--G-KLEDVH---LPFPKVDIIISEWM--GYFLLY-----ESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp EE--S-CTTTSC---CSSSCEEEEEECCC--BTTBST-----TCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EE--C-chhhcc---CCCCcccEEEEeCc--hhhccc-----HHHHHHHHHHHHhhcCCCeEEEEe
Confidence 32 2 333332 11011144554433 233332 24466787766 678999777643
No 124
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=39.97 E-value=31 Score=32.39 Aligned_cols=101 Identities=13% Similarity=0.032 Sum_probs=55.2
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
--+|+|+|.|.|. ....|+.+. | =++|||+... . +-++..+.++..+....|... .++++.
T Consensus 61 G~rVLdiG~G~G~----~~~~~~~~~---~-~~v~~id~~~----~----~~~~a~~~~~~~~~~~~~~~~---~a~~~~ 121 (236)
T 3orh_A 61 GGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECND----G----VFQRLRDWAPRQTHKVIPLKG---LWEDVA 121 (236)
T ss_dssp CEEEEEECCTTSH----HHHHHTTSC---E-EEEEEEECCH----H----HHHHHHHHGGGCSSEEEEEES---CHHHHG
T ss_pred CCeEEEECCCccH----HHHHHHHhC---C-cEEEEEeCCH----H----HHHHHHHHHhhCCCceEEEee---hHHhhc
Confidence 3479999998883 334455542 2 2799997642 3 334445667777777666432 222221
Q ss_pred ccccccCCC--CeEEe---ehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEE
Q 009607 338 PWMLQVSPK--EALAV---NSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTV 388 (531)
Q Consensus 338 ~~~L~i~~g--EaLaV---N~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtl 388 (531)
. .+..+ +.+.+ -+.+.++|+.+ .+.+++.+ |-|+|.-+.+
T Consensus 122 ~---~~~~~~FD~i~~D~~~~~~~~~~~~~--------~~~~~~e~~rvLkPGG~l~ 167 (236)
T 3orh_A 122 P---TLPDGHFDGILYDTYPLSEETWHTHQ--------FNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp G---GSCTTCEEEEEECCCCCBGGGTTTHH--------HHHHHHTHHHHEEEEEEEE
T ss_pred c---cccccCCceEEEeeeecccchhhhcc--------hhhhhhhhhheeCCCCEEE
Confidence 1 11111 23332 23444555433 56777754 6689987654
No 125
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=38.72 E-value=86 Score=30.71 Aligned_cols=109 Identities=13% Similarity=0.076 Sum_probs=57.7
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCC-ceEEEEEeccCCccccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVN-IRFTFRGVAASRLEDVK 337 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lg-vpFeF~~v~~~~ledl~ 337 (531)
-.|+|+|.|.|. +...|+.+ +|..+||+|+.. ...++...+++.++++.++ -.++|.. . ...++.
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid----~~~i~~a~~~~~~~~~~~~~~~v~~~~--~-D~~~~~ 162 (304)
T 3bwc_A 97 ERVLIIGGGDGG----VLREVLRH---GTVEHCDLVDID----GEVMEQSKQHFPQISRSLADPRATVRV--G-DGLAFV 162 (304)
T ss_dssp CEEEEEECTTSH----HHHHHHTC---TTCCEEEEEESC----HHHHHHHHHHCHHHHGGGGCTTEEEEE--S-CHHHHH
T ss_pred CeEEEEcCCCCH----HHHHHHhC---CCCCEEEEEECC----HHHHHHHHHHhHHhhcccCCCcEEEEE--C-cHHHHH
Confidence 479999999885 55666655 345699999864 2556666666655544432 2244432 1 111110
Q ss_pred ccccccCCC--CeEEeehHHHhhhhcCCCCCCCChH--HHHHHHH-HhcCCcEEEEEecC
Q 009607 338 PWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPM--EMVLGWI-RNLNPKIMTVVEQE 392 (531)
Q Consensus 338 ~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~--~~vL~~I-r~L~PkIvtlvEqE 392 (531)
....++ +.|++|+.. +.... ..+ ..+++.+ |.|+|.-++++..+
T Consensus 163 ---~~~~~~~fDvIi~d~~~--~~~~~------~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 163 ---RQTPDNTYDVVIIDTTD--PAGPA------SKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp ---HSSCTTCEEEEEEECC-----------------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ---HhccCCceeEEEECCCC--ccccc------hhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 000112 567776643 21111 111 4677665 66899887776644
No 126
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=37.00 E-value=20 Score=35.82 Aligned_cols=118 Identities=17% Similarity=0.140 Sum_probs=63.2
Q ss_pred HHHHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEE
Q 009607 245 ANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFT 324 (531)
Q Consensus 245 ANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFe 324 (531)
..+.|++.+.....-+|+|+|.|.|.-- ..|+.+ + |..++|||+... ..++.+.+++ +..++..+
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~----~~la~~--~-~~~~v~~vD~s~----~~l~~a~~~~----~~~~~~~~ 248 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLS----VAFARH--S-PKIRLTLCDVSA----PAVEASRATL----AANGVEGE 248 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHH----HHHHHH--C-TTCBCEEEESBH----HHHHHHHHHH----HHTTCCCE
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHH----HHHHHH--C-CCCEEEEEECCH----HHHHHHHHHH----HHhCCCCE
Confidence 3566777774433447999999988633 334433 2 446899998642 4455554443 33566655
Q ss_pred EEEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 325 FRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 325 F~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
|. ..+-.+.. .. .=+.|+.|..| |+-... .......+|+.+ +-|+|.-.+++.
T Consensus 249 ~~--~~d~~~~~-~~-----~fD~Iv~~~~~--~~g~~~---~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 249 VF--ASNVFSEV-KG-----RFDMIISNPPF--HDGMQT---SLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp EE--ECSTTTTC-CS-----CEEEEEECCCC--CSSSHH---HHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EE--Eccccccc-cC-----CeeEEEECCCc--ccCccC---CHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 52 22212111 11 11566667654 321100 012356677666 557998776554
No 127
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=36.79 E-value=1.1e+02 Score=26.67 Aligned_cols=42 Identities=21% Similarity=0.148 Sum_probs=27.5
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHH
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLA 313 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~ 313 (531)
-+|+|+|.|.|. +...||.+ + .++|||+.. ...++.+.+++.
T Consensus 24 ~~vLDiGcG~G~----~~~~la~~-~----~~v~~vD~s----~~~l~~a~~~~~ 65 (185)
T 3mti_A 24 SIVVDATMGNGN----DTAFLAGL-S----KKVYAFDVQ----EQALGKTSQRLS 65 (185)
T ss_dssp CEEEESCCTTSH----HHHHHHTT-S----SEEEEEESC----HHHHHHHHHHHH
T ss_pred CEEEEEcCCCCH----HHHHHHHh-C----CEEEEEECC----HHHHHHHHHHHH
Confidence 369999999885 33446665 3 489999864 245555555444
No 128
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=36.16 E-value=87 Score=27.91 Aligned_cols=66 Identities=14% Similarity=0.047 Sum_probs=37.9
Q ss_pred HHHHHHhhhC--CCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce
Q 009607 245 ANQAILEAFD--GHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR 322 (531)
Q Consensus 245 ANqAILEA~~--g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp 322 (531)
..+.+++.+. -.+.-.|+|+|.|.|. +...|+.++ ..++|||+... ..++.+.+ .++..+++
T Consensus 46 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~~~v~~vD~s~----~~~~~a~~----~~~~~~~~ 109 (205)
T 3grz_A 46 TTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKLG----AKSVLATDISD----ESMTAAEE----NAALNGIY 109 (205)
T ss_dssp HHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHTT----CSEEEEEESCH----HHHHHHHH----HHHHTTCC
T ss_pred cHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHCC----CCEEEEEECCH----HHHHHHHH----HHHHcCCC
Confidence 3344555554 2345689999999983 344466552 34999998642 34444433 33445554
Q ss_pred -EEEE
Q 009607 323 -FTFR 326 (531)
Q Consensus 323 -FeF~ 326 (531)
++|.
T Consensus 110 ~v~~~ 114 (205)
T 3grz_A 110 DIALQ 114 (205)
T ss_dssp CCEEE
T ss_pred ceEEE
Confidence 5554
No 129
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=35.59 E-value=2.2e+02 Score=25.14 Aligned_cols=109 Identities=15% Similarity=0.076 Sum_probs=58.2
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce-EEE
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR-FTF 325 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp-FeF 325 (531)
..+++.+.-.+.-.|+|+|.|.|. +...|+.+ + |..++|||+.. ...++.+.+++. ..|++ ++|
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~--~-~~~~v~~vD~s----~~~~~~a~~~~~----~~~~~~v~~ 94 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSAS----VSIEASNL--M-PNGRIFALERN----PQYLGFIRDNLK----KFVARNVTL 94 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCH----HHHHHHHH--C-TTSEEEEEECC----HHHHHHHHHHHH----HHTCTTEEE
T ss_pred HHHHHHcCCCCCCEEEEECCCCCH----HHHHHHHH--C-CCCEEEEEeCC----HHHHHHHHHHHH----HhCCCcEEE
Confidence 345666666666789999999886 33334444 1 35699999864 244555544433 33442 444
Q ss_pred EEeccCCcccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 326 RGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 326 ~~v~~~~ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
.. .+-.+.+.. ...=+.++++..+ .....+|+.+ +.|+|.-.+++
T Consensus 95 ~~--~d~~~~~~~----~~~~D~i~~~~~~-------------~~~~~~l~~~~~~LkpgG~l~~ 140 (204)
T 3e05_A 95 VE--AFAPEGLDD----LPDPDRVFIGGSG-------------GMLEEIIDAVDRRLKSEGVIVL 140 (204)
T ss_dssp EE--CCTTTTCTT----SCCCSEEEESCCT-------------TCHHHHHHHHHHHCCTTCEEEE
T ss_pred Ee--CChhhhhhc----CCCCCEEEECCCC-------------cCHHHHHHHHHHhcCCCeEEEE
Confidence 32 211121111 1112455555432 1345666655 56899877665
No 130
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=35.09 E-value=3.5e+02 Score=27.92 Aligned_cols=45 Identities=16% Similarity=0.140 Sum_probs=34.2
Q ss_pred eeEEEEcccCCC----CchHHHHHHHhcCCC------CCCeEEEEEeCCCCCCCh
Q 009607 258 CVHVVDFNLMHG----LQWPALIQALALRPG------GPPLLRLTGIGPPSPDGR 302 (531)
Q Consensus 258 ~VHIIDf~I~~G----~QWpsLiqaLA~R~g------GPP~LRITgI~~p~~~~~ 302 (531)
.+.|.|||.+.| .-+-.+|+++..+.. .+|.+.+..-+.|..+..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN 107 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFN 107 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHH
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchH
Confidence 899999999999 466677888877643 268999999999986644
No 131
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=33.59 E-value=29 Score=32.06 Aligned_cols=105 Identities=13% Similarity=0.107 Sum_probs=53.0
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
.-.|+|+|.|.|. +...|+.+ ++ ++|||+... ..++...+++ ..- ..+|... .+.++.
T Consensus 57 ~~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s~----~~~~~a~~~~----~~~--~~~~~~~---d~~~~~ 114 (245)
T 3ggd_A 57 ELPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVSK----SALEIAAKEN----TAA--NISYRLL---DGLVPE 114 (245)
T ss_dssp TSCEEEETCTTSH----HHHHHHHH--SS---CEEEEESCH----HHHHHHHHHS----CCT--TEEEEEC---CTTCHH
T ss_pred CCeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECCH----HHHHHHHHhC----ccc--CceEEEC---cccccc
Confidence 3459999999874 44445544 23 899998642 3444443332 111 3444322 233322
Q ss_pred ccc-ccc-CCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcE-EEEEecC
Q 009607 338 PWM-LQV-SPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKI-MTVVEQE 392 (531)
Q Consensus 338 ~~~-L~i-~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkI-vtlvEqE 392 (531)
... +.- .+-.+|+.+ ..+|++.. .....+|+.+ +.|+|.- ++++|..
T Consensus 115 ~~~~~~~~~~~d~v~~~--~~~~~~~~------~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 115 QAAQIHSEIGDANIYMR--TGFHHIPV------EKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHHHHHHHCSCEEEEE--SSSTTSCG------GGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cccccccccCccEEEEc--chhhcCCH------HHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 110 100 011234434 44677643 3456777665 5689975 4666653
No 132
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=32.54 E-value=1e+02 Score=32.47 Aligned_cols=118 Identities=8% Similarity=-0.008 Sum_probs=61.0
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHH---HHHHHHHHHhCCc--
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREI---GLRLAELARSVNI-- 321 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~et---G~rL~~fA~~lgv-- 321 (531)
..|++.+.-.+.-.|+|+|.|.|.+-..|.+.. +..+++||+... ..++.+ -+.+.+-++..|+
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-------g~~~V~GVDis~----~~l~~A~~Ml~~ar~~~~~~Gl~~ 300 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-------GCALSFGCEIMD----DASDLTILQYEELKKRCKLYGMRL 300 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-------CCSEEEEEECCH----HHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-------CCCEEEEEeCCH----HHHHHHHHhHHHHHHHHHHcCCCC
Confidence 456676665555689999999987655444422 123899998652 333333 2223344455664
Q ss_pred -eEEEEEeccCCccccccccc--ccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHH-HHHHhcCCcEEEEEe
Q 009607 322 -RFTFRGVAASRLEDVKPWML--QVSPKEALAVNSILQLHKLLGSDPARNSPMEMVL-GWIRNLNPKIMTVVE 390 (531)
Q Consensus 322 -pFeF~~v~~~~ledl~~~~L--~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL-~~Ir~L~PkIvtlvE 390 (531)
.++|. ....+.+ .+.+ ...+=++|++|..+ + . .....+| ...+.|+|.-.+++-
T Consensus 301 ~nV~~i--~gD~~~~--~~~~~~~~~~FDvIvvn~~l--~---~------~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 301 NNVEFS--LKKSFVD--NNRVAELIPQCDVILVNNFL--F---D------EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CCEEEE--ESSCSTT--CHHHHHHGGGCSEEEECCTT--C---C------HHHHHHHHHHHTTCCTTCEEEES
T ss_pred CceEEE--EcCcccc--ccccccccCCCCEEEEeCcc--c---c------ccHHHHHHHHHHhCCCCeEEEEe
Confidence 35553 2211211 0001 01122577777543 1 1 1233344 556788998665553
No 133
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=32.37 E-value=2.3e+02 Score=29.16 Aligned_cols=109 Identities=20% Similarity=0.139 Sum_probs=59.8
Q ss_pred HHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce-EEEEE
Q 009607 249 ILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR-FTFRG 327 (531)
Q Consensus 249 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp-FeF~~ 327 (531)
+++.+...+.-.|+|+|.|.|.--. .||.+ + -+++||+.. ...++.+.++ |+..|++ .+|..
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~~~----~la~~-~----~~V~gvD~s----~~al~~A~~n----~~~~~~~~v~f~~ 340 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNFTL----PLATQ-A----ASVVGVEGV----PALVEKGQQN----ARLNGLQNVTFYH 340 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTTHH----HHHTT-S----SEEEEEESC----HHHHHHHHHH----HHHTTCCSEEEEE
T ss_pred HHHhhcCCCCCEEEECCCCCCHHHH----HHHhh-C----CEEEEEeCC----HHHHHHHHHH----HHHcCCCceEEEE
Confidence 3444443334479999999986443 45554 2 389999864 2455554443 3445653 56643
Q ss_pred eccCCccc-ccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcCCcEEEEEe
Q 009607 328 VAASRLED-VKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVE 390 (531)
Q Consensus 328 v~~~~led-l~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~PkIvtlvE 390 (531)
- .+++ +....+.-..=+.|++|-. +.+ .+.+++.+..++|+-++.+.
T Consensus 341 ~---d~~~~l~~~~~~~~~fD~Vv~dPP------------r~g-~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 341 E---NLEEDVTKQPWAKNGFDKVLLDPA------------RAG-AAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp C---CTTSCCSSSGGGTTCCSEEEECCC------------TTC-CHHHHHHHHHHCCSEEEEEE
T ss_pred C---CHHHHhhhhhhhcCCCCEEEECCC------------Ccc-HHHHHHHHHhcCCCeEEEEE
Confidence 2 2222 1110011111256666532 122 34689999999999888763
No 134
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=31.63 E-value=1.9e+02 Score=28.10 Aligned_cols=135 Identities=10% Similarity=-0.041 Sum_probs=69.7
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhC-CceEEEEEeccCCccccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSV-NIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~l-gvpFeF~~v~~~~ledl~ 337 (531)
-+|+|+|.|.|. +...|+.+. |.-+||+|+.. ...++...+++.+++..+ +-.+++.. . ...+.
T Consensus 92 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid----~~~~~~a~~~~~~~~~~~~~~~v~~~~--~-D~~~~- 156 (296)
T 1inl_A 92 KKVLIIGGGDGG----TLREVLKHD---SVEKAILCEVD----GLVIEAARKYLKQTSCGFDDPRAEIVI--A-NGAEY- 156 (296)
T ss_dssp CEEEEEECTTCH----HHHHHTTST---TCSEEEEEESC----HHHHHHHHHHCHHHHGGGGCTTEEEEE--S-CHHHH-
T ss_pred CEEEEEcCCcCH----HHHHHHhcC---CCCEEEEEECC----HHHHHHHHHHhHhhccccCCCceEEEE--C-cHHHH-
Confidence 479999999884 556666653 34699999864 356666666666554433 22344432 1 11110
Q ss_pred ccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCcchHHHHHHHHHHHHHH
Q 009607 338 PWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTM 414 (531)
Q Consensus 338 ~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqEanhN~p~F~~RF~eAL~yYsal 414 (531)
+...++ +.|++|.... .... ...--...+++.+ +.|+|.-+++++...-.. -.+.+.+.+......
T Consensus 157 ---l~~~~~~fD~Ii~d~~~~--~~~~---~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~~l~~~ 225 (296)
T 1inl_A 157 ---VRKFKNEFDVIIIDSTDP--TAGQ---GGHLFTEEFYQACYDALKEDGVFSAETEDPFY---DIGWFKLAYRRISKV 225 (296)
T ss_dssp ---GGGCSSCEEEEEEEC---------------CCSHHHHHHHHHHEEEEEEEEEECCCTTT---THHHHHHHHHHHHHH
T ss_pred ---HhhCCCCceEEEEcCCCc--ccCc---hhhhhHHHHHHHHHHhcCCCcEEEEEccCccc---CHHHHHHHHHHHHHH
Confidence 000011 5677765421 0100 0001124567655 668999888876432211 134555555566666
Q ss_pred hhhhh
Q 009607 415 FDSLE 419 (531)
Q Consensus 415 FDSLe 419 (531)
|....
T Consensus 226 F~~v~ 230 (296)
T 1inl_A 226 FPITR 230 (296)
T ss_dssp CSEEE
T ss_pred CCceE
Confidence 76544
No 135
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=31.48 E-value=1.8e+02 Score=27.24 Aligned_cols=20 Identities=20% Similarity=0.149 Sum_probs=16.5
Q ss_pred chhhHHHHHhcCCceeccCC
Q 009607 455 PLAKWRNRLAGAGFRPLHLG 474 (531)
Q Consensus 455 ~~~~Wr~rm~~AGF~~vpls 474 (531)
+.+.|+..++.+||+.+.+.
T Consensus 217 ~~~~l~~~l~~aGF~i~~~~ 236 (263)
T 2a14_A 217 EKGEVEQAVLDAGFDIEQLL 236 (263)
T ss_dssp CHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEe
Confidence 45689999999999987764
No 136
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=31.37 E-value=34 Score=30.35 Aligned_cols=43 Identities=16% Similarity=0.219 Sum_probs=28.3
Q ss_pred HHhhhCC-CceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCC
Q 009607 249 ILEAFDG-HDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPS 298 (531)
Q Consensus 249 ILEA~~g-~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~ 298 (531)
+++.+.. .+.-+|+|+|.|.|. +...|+.+. |..++|||+...
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~~~ 64 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGC----IAVSIALAC---PGVSVTAVDLSM 64 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCH----HHHHHHHHC---TTEEEEEEECC-
T ss_pred HHHHhhhcCCCCEEEEecCCHhH----HHHHHHHhC---CCCeEEEEECCH
Confidence 4455544 567799999999985 333344331 457999998753
No 137
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=31.26 E-value=1.3e+02 Score=27.22 Aligned_cols=62 Identities=18% Similarity=0.137 Sum_probs=39.0
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EEE
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FTF 325 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--FeF 325 (531)
.+++.+.-.+.=.|+|+|.|.|. +...||.+ + .++|||+.. ...++.+. +.++..|++ ++|
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s----~~~~~~a~----~~~~~~g~~~~v~~ 108 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPR----ADRIENIQ----KNIDTYGLSPRMRA 108 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESC----HHHHHHHH----HHHHHTTCTTTEEE
T ss_pred HHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCC----HHHHHHHH----HHHHHcCCCCCEEE
Confidence 45666665555679999999874 34456666 3 389999864 24444443 345556765 666
Q ss_pred E
Q 009607 326 R 326 (531)
Q Consensus 326 ~ 326 (531)
.
T Consensus 109 ~ 109 (204)
T 3njr_A 109 V 109 (204)
T ss_dssp E
T ss_pred E
Confidence 4
No 138
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=30.30 E-value=34 Score=32.27 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=34.0
Q ss_pred CCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEe
Q 009607 285 GPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGV 328 (531)
Q Consensus 285 GPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v 328 (531)
|||..|||...+.-......|+++-..+.+..+..|..|.|+--
T Consensus 133 gaP~Y~i~~~~~Dkk~g~~~L~~aie~i~~~I~~~gG~~~v~r~ 176 (188)
T 1yz7_A 133 GAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGEATLLRK 176 (188)
T ss_dssp STTEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCcEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEc
Confidence 67877777776543223468899999999999999999999743
No 139
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=30.02 E-value=2.3e+02 Score=29.27 Aligned_cols=94 Identities=15% Similarity=0.141 Sum_probs=56.1
Q ss_pred EEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccccc
Q 009607 260 HVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVKPW 339 (531)
Q Consensus 260 HIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~~~ 339 (531)
.|+|+|.|.|.- ...||.+ + -+++||+.. ...++.+.++ |+..|+..+|..- ..+++.+.
T Consensus 293 ~VLDlgcG~G~~----sl~la~~-~----~~V~gvD~s----~~ai~~A~~n----~~~ngl~v~~~~~---d~~~~~~~ 352 (425)
T 2jjq_A 293 KILDMYSGVGTF----GIYLAKR-G----FNVKGFDSN----EFAIEMARRN----VEINNVDAEFEVA---SDREVSVK 352 (425)
T ss_dssp EEEEETCTTTHH----HHHHHHT-T----CEEEEEESC----HHHHHHHHHH----HHHHTCCEEEEEC---CTTTCCCT
T ss_pred EEEEeeccchHH----HHHHHHc-C----CEEEEEECC----HHHHHHHHHH----HHHcCCcEEEEEC---ChHHcCcc
Confidence 689999998853 3345554 2 289999864 2455555443 3344655555432 33333221
Q ss_pred ccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcCCcEEEEEe
Q 009607 340 MLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVE 390 (531)
Q Consensus 340 ~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~PkIvtlvE 390 (531)
.=++|++|-. +.+..+.++..++.++|+-++.+.
T Consensus 353 -----~fD~Vv~dPP------------r~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 353 -----GFDTVIVDPP------------RAGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp -----TCSEEEECCC------------TTCSCHHHHHHHHHHCCSEEEEEE
T ss_pred -----CCCEEEEcCC------------ccchHHHHHHHHHhcCCCcEEEEE
Confidence 1246666532 224446799999999999888774
No 140
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=29.53 E-value=50 Score=31.34 Aligned_cols=53 Identities=17% Similarity=0.219 Sum_probs=43.7
Q ss_pred ChHHHHHHHHHhcCCcEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhhhhcC
Q 009607 369 SPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEAC 421 (531)
Q Consensus 369 ~~~~~vL~~Ir~L~PkIvtlvEqEanhN~p~F~~RF~eAL~yYsalFDSLea~ 421 (531)
-+.+.+++.+++.+.+..+.+|.+.........+-+.+++.|...+++.|..|
T Consensus 238 id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~s~~~l~~l~~~~~~~ 290 (290)
T 3tva_A 238 VGMEAYLTTLWEIGYRGPLTIEREIPHDPVQQKKDLASALELLTGLRKKIANC 290 (290)
T ss_dssp SCHHHHHHHHHHTTCCSCEEECCCCTTSHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eCHHHHHHHHHHcCCCCcEEEEEecCCChhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 35788999999999998889998876433357889999999999999887654
No 141
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=29.17 E-value=74 Score=30.22 Aligned_cols=102 Identities=13% Similarity=0.074 Sum_probs=53.7
Q ss_pred CceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce-EEEEEeccCCcc
Q 009607 256 HDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR-FTFRGVAASRLE 334 (531)
Q Consensus 256 ~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp-FeF~~v~~~~le 334 (531)
.+.-+|+|+|.|-|.---.|-+. + |..++|+|+... ..++.+. +-++.+|+. .+|..- +.+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~---~----~~~~v~~vD~s~----~~~~~a~----~~~~~~~l~~v~~~~~---d~~ 140 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIV---R----PELELVLVDATR----KKVAFVE----RAIEVLGLKGARALWG---RAE 140 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHH---C----TTCEEEEEESCH----HHHHHHH----HHHHHHTCSSEEEEEC---CHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHH---C----CCCEEEEEECCH----HHHHHHH----HHHHHhCCCceEEEEC---cHH
Confidence 34458999999999754433332 1 446999998642 3444333 344455663 555332 344
Q ss_pred cccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEE
Q 009607 335 DVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVV 389 (531)
Q Consensus 335 dl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlv 389 (531)
++......-..=+.|+.+.+ ...+.++..+ +-|+|.-..++
T Consensus 141 ~~~~~~~~~~~fD~I~s~a~--------------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 141 VLAREAGHREAYARAVARAV--------------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp HHTTSTTTTTCEEEEEEESS--------------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred HhhcccccCCCceEEEECCc--------------CCHHHHHHHHHHHcCCCeEEEE
Confidence 43321000000134444321 2356777766 55788876554
No 142
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=28.91 E-value=77 Score=28.41 Aligned_cols=56 Identities=11% Similarity=0.016 Sum_probs=34.5
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHH
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLA 313 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~ 313 (531)
.+++.+.-.+.-.|+|+|.|.|.--..|.+.. .|.-++|+|+.. ...++...+++.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~~----~~~~~~a~~~~~ 123 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIERI----PELAEKAERTLR 123 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEESC----HHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeCC----HHHHHHHHHHHH
Confidence 45555554555689999999886555554443 234599999864 244555544443
No 143
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=28.91 E-value=1e+02 Score=27.14 Aligned_cols=43 Identities=12% Similarity=0.037 Sum_probs=26.6
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHH
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLR 311 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~r 311 (531)
+.-.|+|+|.|.|.- ...|+.+ |+. ++|||+.. ...++.+.++
T Consensus 42 ~~~~vLdiGcG~G~~----~~~l~~~--~~~--~v~~~D~s----~~~~~~a~~~ 84 (215)
T 2pxx_A 42 PEDRILVLGCGNSAL----SYELFLG--GFP--NVTSVDYS----SVVVAAMQAC 84 (215)
T ss_dssp TTCCEEEETCTTCSH----HHHHHHT--TCC--CEEEEESC----HHHHHHHHHH
T ss_pred CCCeEEEECCCCcHH----HHHHHHc--CCC--cEEEEeCC----HHHHHHHHHh
Confidence 445799999998853 3344544 333 89999864 2444444443
No 144
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=28.53 E-value=94 Score=27.58 Aligned_cols=96 Identities=11% Similarity=0.138 Sum_probs=52.9
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce-EEEEEeccCCccccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR-FTFRGVAASRLEDVK 337 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp-FeF~~v~~~~ledl~ 337 (531)
-+|+|+|.|.|.--..|.+.+ |..++|||+... ..++.+. +.++..+++ .+|... .++++.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~----~~~~~a~----~~~~~~~~~~v~~~~~---d~~~~~ 128 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSLG----KRVRFLR----QVQHELKLENIEPVQS---RVEEFP 128 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESCH----HHHHHHH----HHHHHTTCSSEEEEEC---CTTTSC
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCCH----HHHHHHH----HHHHHcCCCCeEEEec---chhhCC
Confidence 389999999997655544432 335999998642 3344333 334445664 565432 333322
Q ss_pred ccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 338 PWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 338 ~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
+. ..=+.|+.|.. .....+|+.+ +.|+|.-.++++
T Consensus 129 ~~----~~~D~i~~~~~--------------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 129 SE----PPFDGVISRAF--------------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CC----SCEEEEECSCS--------------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred cc----CCcCEEEEecc--------------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 10 01134444321 2345677766 457998777766
No 145
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=28.35 E-value=1e+02 Score=26.51 Aligned_cols=52 Identities=19% Similarity=0.124 Sum_probs=31.5
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHH
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRL 312 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL 312 (531)
.+++.+.-.+.-+|+|+|.|.|. +...|+.+. .++|||+.. ...++...+++
T Consensus 24 ~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~----~~~~~~a~~~~ 75 (192)
T 1l3i_A 24 LIMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRN----PEAISTTEMNL 75 (192)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESC----HHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECC----HHHHHHHHHHH
Confidence 34554554555689999998874 334455443 599999864 24454444433
No 146
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=28.06 E-value=1.6e+02 Score=28.27 Aligned_cols=137 Identities=12% Similarity=0.059 Sum_probs=70.9
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCC-ceEEEEEeccCCcccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVN-IRFTFRGVAASRLEDV 336 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lg-vpFeF~~v~~~~ledl 336 (531)
.-+|+|+|.|.|. +...++.++ |.-++|+|+.. ...++...+++.+++..++ =.+++. ..+-.+-+
T Consensus 76 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vEid----~~~v~~ar~~~~~~~~~~~~~rv~v~--~~D~~~~l 142 (275)
T 1iy9_A 76 PEHVLVVGGGDGG----VIREILKHP---SVKKATLVDID----GKVIEYSKKFLPSIAGKLDDPRVDVQ--VDDGFMHI 142 (275)
T ss_dssp CCEEEEESCTTCH----HHHHHTTCT---TCSEEEEEESC----HHHHHHHHHHCHHHHTTTTSTTEEEE--ESCSHHHH
T ss_pred CCEEEEECCchHH----HHHHHHhCC---CCceEEEEECC----HHHHHHHHHHhHhhccccCCCceEEE--ECcHHHHH
Confidence 3579999999883 556666553 44699999864 3566666666665543332 124443 22111111
Q ss_pred cccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCcchHHHHHHHHHHHHHHh
Q 009607 337 KPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMF 415 (531)
Q Consensus 337 ~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqEanhN~p~F~~RF~eAL~yYsalF 415 (531)
.. .. ..=+.|+++... +.-.. ..--...+++.+ +.|+|.-++++....-... .+++.+.+......|
T Consensus 143 ~~--~~-~~fD~Ii~d~~~--~~~~~----~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~---~~~~~~~~~~l~~~F 210 (275)
T 1iy9_A 143 AK--SE-NQYDVIMVDSTE--PVGPA----VNLFTKGFYAGIAKALKEDGIFVAQTDNPWFT---PELITNVQRDVKEIF 210 (275)
T ss_dssp HT--CC-SCEEEEEESCSS--CCSCC----CCCSTTHHHHHHHHHEEEEEEEEEECCCTTTC---HHHHHHHHHHHHTTC
T ss_pred hh--CC-CCeeEEEECCCC--CCCcc----hhhhHHHHHHHHHHhcCCCcEEEEEcCCcccc---HHHHHHHHHHHHHhC
Confidence 10 00 011566666532 11100 000124566554 6789998888764332111 455566556666666
Q ss_pred hhhh
Q 009607 416 DSLE 419 (531)
Q Consensus 416 DSLe 419 (531)
....
T Consensus 211 ~~v~ 214 (275)
T 1iy9_A 211 PITK 214 (275)
T ss_dssp SEEE
T ss_pred CCeE
Confidence 6543
No 147
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=27.91 E-value=3.7e+02 Score=24.94 Aligned_cols=112 Identities=9% Similarity=0.054 Sum_probs=56.4
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EEEEEeccCCcc
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FTFRGVAASRLE 334 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--FeF~~v~~~~le 334 (531)
+.-.|+|+|.|.|. +...||.+.. . +||||+.. ...++.+.++ ++..++. .+|.. . .+.
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~~---~-~v~gvDi~----~~~~~~a~~n----~~~~~~~~~v~~~~--~-D~~ 109 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRTK---A-KIVGVEIQ----ERLADMAKRS----VAYNQLEDQIEIIE--Y-DLK 109 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTCC---C-EEEEECCS----HHHHHHHHHH----HHHTTCTTTEEEEC--S-CGG
T ss_pred CCCEEEEcCCchhH----HHHHHHHhcC---C-cEEEEECC----HHHHHHHHHH----HHHCCCcccEEEEE--C-cHH
Confidence 34579999999984 4456777732 2 99999864 2344444433 3444554 55532 2 233
Q ss_pred cccccccccCCC--CeEEeehHHHhh---hhcCCCCC-------CCChHHHHHHHH-HhcCCcEEEEEe
Q 009607 335 DVKPWMLQVSPK--EALAVNSILQLH---KLLGSDPA-------RNSPMEMVLGWI-RNLNPKIMTVVE 390 (531)
Q Consensus 335 dl~~~~L~i~~g--EaLaVN~~f~LH---~L~~e~~~-------~~~~~~~vL~~I-r~L~PkIvtlvE 390 (531)
++.. .+.++ +.|+.|-.|.-. .+...... .....+.+++.+ +-|+|.-.+++.
T Consensus 110 ~~~~---~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 110 KITD---LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp GGGG---TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Hhhh---hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 3221 11122 678887664322 22111000 012345677665 557998776664
No 148
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=27.84 E-value=3.3e+02 Score=24.62 Aligned_cols=53 Identities=25% Similarity=0.175 Sum_probs=32.9
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc--eEEEEE
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI--RFTFRG 327 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv--pFeF~~ 327 (531)
.-+|+|+|.|.|. +...|+.+ | .++|||+... ..++.+.+ -++..|+ ..+|..
T Consensus 79 ~~~vLD~gcG~G~----~~~~la~~--~---~~v~~vD~s~----~~~~~a~~----~~~~~~~~~~~~~~~ 133 (241)
T 3gdh_A 79 CDVVVDAFCGVGG----NTIQFALT--G---MRVIAIDIDP----VKIALARN----NAEVYGIADKIEFIC 133 (241)
T ss_dssp CSEEEETTCTTSH----HHHHHHHT--T---CEEEEEESCH----HHHHHHHH----HHHHTTCGGGEEEEE
T ss_pred CCEEEECccccCH----HHHHHHHc--C---CEEEEEECCH----HHHHHHHH----HHHHcCCCcCeEEEE
Confidence 4579999999984 44445544 2 5999998642 44544443 3455566 466643
No 149
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=27.66 E-value=83 Score=32.44 Aligned_cols=104 Identities=16% Similarity=0.161 Sum_probs=53.4
Q ss_pred hCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCC
Q 009607 253 FDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASR 332 (531)
Q Consensus 253 ~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ 332 (531)
++|+ +|+|+|.|.| +-++ +|.|.|.- |++||+... .+ +.. .+.++.-|+.=....+. ..
T Consensus 82 ~~~k---~VLDvG~GtG--iLs~---~Aa~aGA~---~V~ave~s~-----~~-~~a---~~~~~~n~~~~~i~~i~-~~ 140 (376)
T 4hc4_A 82 LRGK---TVLDVGAGTG--ILSI---FCAQAGAR---RVYAVEASA-----IW-QQA---REVVRFNGLEDRVHVLP-GP 140 (376)
T ss_dssp HTTC---EEEEETCTTS--HHHH---HHHHTTCS---EEEEEECST-----TH-HHH---HHHHHHTTCTTTEEEEE-SC
T ss_pred cCCC---EEEEeCCCcc--HHHH---HHHHhCCC---EEEEEeChH-----HH-HHH---HHHHHHcCCCceEEEEe-ee
Confidence 4554 5889888877 3344 44454432 899998531 12 222 23344455532222233 24
Q ss_pred cccccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEE
Q 009607 333 LEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTV 388 (531)
Q Consensus 333 ledl~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtl 388 (531)
.++++.. .+=..|+-+++ -+-|+. .+.++.+|... |-|+|.-+++
T Consensus 141 ~~~~~lp----e~~DvivsE~~--~~~l~~-----e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 141 VETVELP----EQVDAIVSEWM--GYGLLH-----ESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TTTCCCS----SCEEEEECCCC--BTTBTT-----TCSHHHHHHHHHHHEEEEEEEE
T ss_pred eeeecCC----ccccEEEeecc--cccccc-----cchhhhHHHHHHhhCCCCceEC
Confidence 5555421 01123333332 233333 35688888877 5679887765
No 150
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=27.21 E-value=76 Score=30.77 Aligned_cols=131 Identities=12% Similarity=0.093 Sum_probs=64.7
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhC-CceEEEEEeccCCccccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSV-NIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~l-gvpFeF~~v~~~~ledl~ 337 (531)
-+|+|+|.|.|. +...++.+ +|.-++|+|+.. ...++...+++..++..+ +-.++|.. . ...+.
T Consensus 80 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid----~~~i~~a~~~~~~~~~~~~~~~v~~~~--~-D~~~~- 144 (283)
T 2i7c_A 80 KNVLVVGGGDGG----IIRELCKY---KSVENIDICEID----ETVIEVSKIYFKNISCGYEDKRVNVFI--E-DASKF- 144 (283)
T ss_dssp CEEEEEECTTSH----HHHHHTTC---TTCCEEEEEESC----HHHHHHHHHHCTTTSGGGGSTTEEEEE--S-CHHHH-
T ss_pred CeEEEEeCCcCH----HHHHHHHc---CCCCEEEEEECC----HHHHHHHHHHhHHhccccCCCcEEEEE--C-ChHHH-
Confidence 479999999874 56666655 345699999864 244444444433222111 11234422 1 11110
Q ss_pred ccccccCCC--CeEEeehHHHhhhhcCCCCCCCChH--HHHHHHH-HhcCCcEEEEEecCCCCCCcchHHHHHHHHHHHH
Q 009607 338 PWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPM--EMVLGWI-RNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYS 412 (531)
Q Consensus 338 ~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~--~~vL~~I-r~L~PkIvtlvEqEanhN~p~F~~RF~eAL~yYs 412 (531)
+.-.++ ++|++++....+ . ...+ ..+++.+ +.|+|.-++++..+.....+ +.+.+.+....
T Consensus 145 ---l~~~~~~fD~Ii~d~~~~~~--~------~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~---~~~~~~~~~l~ 210 (283)
T 2i7c_A 145 ---LENVTNTYDVIIVDSSDPIG--P------AETLFNQNFYEKIYNALKPNGYCVAQCESLWIHV---GTIKNMIGYAK 210 (283)
T ss_dssp ---HHHCCSCEEEEEEECCCTTT--G------GGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCH---HHHHHHHHHHH
T ss_pred ---HHhCCCCceEEEEcCCCCCC--c------chhhhHHHHHHHHHHhcCCCcEEEEECCCcccCH---HHHHHHHHHHH
Confidence 000012 567766532111 0 1111 5677766 56899988877654333332 23334344444
Q ss_pred HHhhhh
Q 009607 413 TMFDSL 418 (531)
Q Consensus 413 alFDSL 418 (531)
..|...
T Consensus 211 ~~F~~v 216 (283)
T 2i7c_A 211 KLFKKV 216 (283)
T ss_dssp TTCSEE
T ss_pred HHCCce
Confidence 556544
No 151
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=26.99 E-value=2.8e+02 Score=27.09 Aligned_cols=133 Identities=12% Similarity=0.094 Sum_probs=68.6
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHh-CC-ceEEEEEeccCCccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARS-VN-IRFTFRGVAASRLED 335 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~-lg-vpFeF~~v~~~~led 335 (531)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+... ..++...+++...... ++ -.++|. ..+-.+-
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~V~~VDid~----~vi~~ar~~~~~~~~~~~~~~rv~~~--~~D~~~~ 150 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRH---KNVESITMVEIDA----GVVSFCRQYLPNHNAGSYDDPRFKLV--IDDGVNF 150 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTC---TTCCEEEEECSCT----THHHHHHHHCHHHHSSCTTCTTCCEE--CSCSCC-
T ss_pred CCEEEEEeCChhH----HHHHHHhC---CCCCEEEEEECCH----HHHHHHHHhhhhcccccccCCceEEE--EChHHHH
Confidence 3479999999885 55666665 3456999998653 4566666665554321 11 123332 1111111
Q ss_pred ccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChH--HHHHHHH-HhcCCcEEEEEecCCCCCCcchHHHHHHHHHH
Q 009607 336 VKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPM--EMVLGWI-RNLNPKIMTVVEQESNHNQPEFLDRFTTALYY 410 (531)
Q Consensus 336 l~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~--~~vL~~I-r~L~PkIvtlvEqEanhN~p~F~~RF~eAL~y 410 (531)
+.. ..+ ++|++|+.... -. ...+ ..+++.+ +.|+|.-++++.-++....+ +.+.+.+..
T Consensus 151 l~~-----~~~~fDvIi~D~~~p~--~~------~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~---~~~~~~~~~ 214 (294)
T 3adn_A 151 VNQ-----TSQTFDVIISDCTDPI--GP------GESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ---EEAIDSHRK 214 (294)
T ss_dssp --C-----CCCCEEEEEECC------------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC---HHHHHHHHH
T ss_pred Hhh-----cCCCccEEEECCCCcc--Cc------chhccHHHHHHHHHHhcCCCCEEEEecCCcccch---HHHHHHHHH
Confidence 110 112 56777664211 01 1111 5577655 66899988887655433333 344555555
Q ss_pred HHHHhhhhh
Q 009607 411 YSTMFDSLE 419 (531)
Q Consensus 411 YsalFDSLe 419 (531)
....|....
T Consensus 215 l~~~F~~v~ 223 (294)
T 3adn_A 215 LSHYFSDVG 223 (294)
T ss_dssp HHHHCSEEE
T ss_pred HHHHCCCeE
Confidence 666676654
No 152
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=25.86 E-value=76 Score=29.54 Aligned_cols=56 Identities=21% Similarity=0.164 Sum_probs=34.4
Q ss_pred HHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHH
Q 009607 249 ILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLA 313 (531)
Q Consensus 249 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~ 313 (531)
+++.+.+.+...|+|+|.|.|. +...|+.+-. .|..+||||+.. ...++.+.+++.
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~~-~~~~~v~gvDis----~~~l~~A~~~~~ 98 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGY----LLTVLGLLHR-RSLRQVIASDVD----PAPLELAAKNLA 98 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSH----HHHHHHHHTG-GGEEEEEEEESC----HHHHHHHHHHHH
T ss_pred HHHhcccCCCCeEEECCCCCCH----HHHHHHHHhc-cCCCeEEEEECC----HHHHHHHHHHHH
Confidence 4455555567899999999993 4444444311 135799999864 245555554443
No 153
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=25.36 E-value=3.2e+02 Score=27.77 Aligned_cols=107 Identities=11% Similarity=0.038 Sum_probs=59.0
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCcccc
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDV 336 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl 336 (531)
+.-+|+|+|.|.|.- ...|+.+ | .++|||+.. ...++.+.++ ++..++..+|..- ...+.
T Consensus 233 ~~~~VLDlGcG~G~~----~~~la~~--g---~~V~gvDis----~~al~~A~~n----~~~~~~~v~~~~~---D~~~~ 292 (381)
T 3dmg_A 233 RGRQVLDLGAGYGAL----TLPLARM--G---AEVVGVEDD----LASVLSLQKG----LEANALKAQALHS---DVDEA 292 (381)
T ss_dssp TTCEEEEETCTTSTT----HHHHHHT--T---CEEEEEESB----HHHHHHHHHH----HHHTTCCCEEEEC---STTTT
T ss_pred CCCEEEEEeeeCCHH----HHHHHHc--C---CEEEEEECC----HHHHHHHHHH----HHHcCCCeEEEEc---chhhc
Confidence 345899999999964 3344544 2 399999864 2445554443 3445666666432 22222
Q ss_pred cccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHH-HHhcCCcEEEEEec
Q 009607 337 KPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGW-IRNLNPKIMTVVEQ 391 (531)
Q Consensus 337 ~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~-Ir~L~PkIvtlvEq 391 (531)
... -..=+.|+.|..| |+-... .......+++. .+.|+|.-.+++.-
T Consensus 293 ~~~---~~~fD~Ii~npp~--~~~~~~---~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 293 LTE---EARFDIIVTNPPF--HVGGAV---ILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp SCT---TCCEEEEEECCCC--CTTCSS---CCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccc---CCCeEEEEECCch--hhcccc---cHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 111 0011567777664 442221 12345566654 46689987777653
No 154
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=24.49 E-value=77 Score=31.53 Aligned_cols=132 Identities=13% Similarity=0.103 Sum_probs=66.6
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhC-CceEEEEEeccCCccccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSV-NIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~l-gvpFeF~~v~~~~ledl~ 337 (531)
-+|+|+|.|.|. +...|+.++ |..++|+|+.. ...++...+++.+++..+ +-.++|.. . ...+.
T Consensus 118 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDis----~~~l~~ar~~~~~~~~~~~~~~v~~~~--~-D~~~~- 182 (321)
T 2pt6_A 118 KNVLVVGGGDGG----IIRELCKYK---SVENIDICEID----ETVIEVSKIYFKNISCGYEDKRVNVFI--E-DASKF- 182 (321)
T ss_dssp CEEEEEECTTCH----HHHHHTTCT---TCCEEEEEESC----HHHHHHHHHHCTTTSGGGGSTTEEEEE--S-CHHHH-
T ss_pred CEEEEEcCCccH----HHHHHHHcC---CCCEEEEEECC----HHHHHHHHHHHHhhccccCCCcEEEEE--c-cHHHH-
Confidence 479999999885 556666553 45699999864 245555554443321112 11244432 1 11110
Q ss_pred ccccccCCC--CeEEeehHHHhhhhcCCCCCCCChH--HHHHHHH-HhcCCcEEEEEecCCCCCCcchHHHHHHHHHHHH
Q 009607 338 PWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPM--EMVLGWI-RNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYS 412 (531)
Q Consensus 338 ~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~--~~vL~~I-r~L~PkIvtlvEqEanhN~p~F~~RF~eAL~yYs 412 (531)
+.-.++ +.|++|.....+. .... ..+++.+ +.|+|.-+++++.+.....+. .+.+.+....
T Consensus 183 ---l~~~~~~fDvIi~d~~~p~~~--------~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~---~~~~~~~~l~ 248 (321)
T 2pt6_A 183 ---LENVTNTYDVIIVDSSDPIGP--------AETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVG---TIKNMIGYAK 248 (321)
T ss_dssp ---HHHCCSCEEEEEEECCCSSSG--------GGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHH---HHHHHHHHHH
T ss_pred ---HhhcCCCceEEEECCcCCCCc--------chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHH---HHHHHHHHHH
Confidence 000011 5667665311110 0111 5677665 667999998887654333333 3344344444
Q ss_pred HHhhhhh
Q 009607 413 TMFDSLE 419 (531)
Q Consensus 413 alFDSLe 419 (531)
..|...+
T Consensus 249 ~~F~~v~ 255 (321)
T 2pt6_A 249 KLFKKVE 255 (321)
T ss_dssp TTCSEEE
T ss_pred HHCCCeE
Confidence 5565443
No 155
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=24.16 E-value=1.1e+02 Score=28.79 Aligned_cols=101 Identities=14% Similarity=0.184 Sum_probs=52.3
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EEEEEeccCC-ccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FTFRGVAASR-LED 335 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--FeF~~v~~~~-led 335 (531)
-.|+|+|.+.|.--. .||.+. |+..+||+|+... ..++.+. +.++..|++ .+|..-.+.. +..
T Consensus 65 ~~VLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~s~----~~~~~a~----~~~~~~g~~~~v~~~~~d~~~~l~~ 130 (248)
T 3tfw_A 65 KRILEIGTLGGYSTI----WMAREL--PADGQLLTLEADA----HHAQVAR----ENLQLAGVDQRVTLREGPALQSLES 130 (248)
T ss_dssp SEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEECCH----HHHHHHH----HHHHHTTCTTTEEEEESCHHHHHHT
T ss_pred CEEEEecCCchHHHH----HHHHhC--CCCCEEEEEECCH----HHHHHHH----HHHHHcCCCCcEEEEEcCHHHHHHh
Confidence 479999999885433 344432 3356999998642 3444443 334445654 5554321100 111
Q ss_pred ccccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHH-HHhcCCcEEEEEe
Q 009607 336 VKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGW-IRNLNPKIMTVVE 390 (531)
Q Consensus 336 l~~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~-Ir~L~PkIvtlvE 390 (531)
+.. ...=+.|+++.. ......+|+. .+-|+|.-+++++
T Consensus 131 ~~~----~~~fD~V~~d~~-------------~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 131 LGE----CPAFDLIFIDAD-------------KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CCS----CCCCSEEEECSC-------------GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred cCC----CCCeEEEEECCc-------------hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 100 001145555431 1223445654 4678999888774
No 156
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=23.21 E-value=65 Score=28.99 Aligned_cols=30 Identities=13% Similarity=0.233 Sum_probs=26.0
Q ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 009607 155 RLVHMLMTCAESVQRGEMAVAGSLIEDMKG 184 (531)
Q Consensus 155 ~Lv~lLl~CAeAV~~gd~~~A~~lL~~i~~ 184 (531)
.+=+.|-+|+++++.||.+.|+.||..-.-
T Consensus 57 EIW~ALraA~~~~e~~Dl~tAQ~IldaAgI 86 (137)
T 2ksn_A 57 EIWDALKAAAHAFESNDHELAQAIIDGANI 86 (137)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHcCC
Confidence 467889999999999999999999976543
No 157
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=22.43 E-value=96 Score=26.30 Aligned_cols=104 Identities=10% Similarity=0.001 Sum_probs=53.0
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCcccccc
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVKP 338 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~~ 338 (531)
-+|+|+|.|.|. +...|+.+ |+ . +|||+.. ...++.+.+++. ..++..+|. .. ...+..+
T Consensus 43 ~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~~----~~~~~~a~~~~~----~~~~~~~~~--~~-d~~~~~~ 102 (171)
T 1ws6_A 43 GRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEKD----PEAVRLLKENVR----RTGLGARVV--AL-PVEVFLP 102 (171)
T ss_dssp CEEEEETCSSCH----HHHHHHHT--TC-E--EEEECCC----HHHHHHHHHHHH----HHTCCCEEE--CS-CHHHHHH
T ss_pred CeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeCC----HHHHHHHHHHHH----HcCCceEEE--ec-cHHHHHH
Confidence 479999999984 44455555 33 2 9999864 244554444433 234444443 22 2222110
Q ss_pred cccccC--CCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHH---HhcCCcEEEEEecCCCC
Q 009607 339 WMLQVS--PKEALAVNSILQLHKLLGSDPARNSPMEMVLGWI---RNLNPKIMTVVEQESNH 395 (531)
Q Consensus 339 ~~L~i~--~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I---r~L~PkIvtlvEqEanh 395 (531)
. +.-. .=+.|+.|.++. + . .+.++..+ +-|+|.-+++++.....
T Consensus 103 ~-~~~~~~~~D~i~~~~~~~-~---~--------~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 103 E-AKAQGERFTVAFMAPPYA-M---D--------LAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp H-HHHTTCCEEEEEECCCTT-S---C--------TTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred h-hhccCCceEEEEECCCCc-h---h--------HHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 0 0000 114566666543 1 1 12344444 56899988777665543
No 158
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=22.11 E-value=94 Score=27.65 Aligned_cols=92 Identities=10% Similarity=0.041 Sum_probs=48.9
Q ss_pred eeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCceEEEEEeccCCccccc
Q 009607 258 CVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRLEDVK 337 (531)
Q Consensus 258 ~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvpFeF~~v~~~~ledl~ 337 (531)
.-+|+|+|.|.|. +...|+.+ |+ -++|||+.. ...++.+.++ ++..++..+|.. . ...++.
T Consensus 50 ~~~vlD~g~G~G~----~~~~l~~~--~~--~~v~~vD~~----~~~~~~a~~~----~~~~~~~~~~~~--~-d~~~~~ 110 (207)
T 1wy7_A 50 GKVVADLGAGTGV----LSYGALLL--GA--KEVICVEVD----KEAVDVLIEN----LGEFKGKFKVFI--G-DVSEFN 110 (207)
T ss_dssp TCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESC----HHHHHHHHHH----TGGGTTSEEEEE--S-CGGGCC
T ss_pred cCEEEEeeCCCCH----HHHHHHHc--CC--CEEEEEECC----HHHHHHHHHH----HHHcCCCEEEEE--C-chHHcC
Confidence 3479999999987 44455655 22 289999864 2344444333 334455555532 2 333332
Q ss_pred ccccccCCCCeEEeehHHHhhhhcCCCCCCCChHHHHHHHHHhcC
Q 009607 338 PWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLN 382 (531)
Q Consensus 338 ~~~L~i~~gEaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~Ir~L~ 382 (531)
. .=+.|+.|..+ |... ......+|+.+.++-
T Consensus 111 ~------~~D~v~~~~p~--~~~~------~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 111 S------RVDIVIMNPPF--GSQR------KHADRPFLLKAFEIS 141 (207)
T ss_dssp C------CCSEEEECCCC--SSSS------TTTTHHHHHHHHHHC
T ss_pred C------CCCEEEEcCCC--cccc------CCchHHHHHHHHHhc
Confidence 1 22577777664 2211 133345666555544
No 159
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=21.78 E-value=72 Score=31.20 Aligned_cols=52 Identities=21% Similarity=0.093 Sum_probs=35.2
Q ss_pred HHHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHH
Q 009607 247 QAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRL 312 (531)
Q Consensus 247 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL 312 (531)
+.|++++.-... +|+|+|.|.|. |-..|+.+. -++|||+... +.++...+++
T Consensus 37 ~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid~----~~~~~l~~~~ 88 (271)
T 3fut_A 37 RRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKDL----RLRPVLEETL 88 (271)
T ss_dssp HHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESCG----GGHHHHHHHT
T ss_pred HHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECCH----HHHHHHHHhc
Confidence 346777766666 99999999885 666777763 2799998652 3444444433
No 160
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=21.54 E-value=93 Score=28.82 Aligned_cols=114 Identities=12% Similarity=0.058 Sum_probs=56.8
Q ss_pred ceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCc-eEEEEEeccCCccc
Q 009607 257 DCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNI-RFTFRGVAASRLED 335 (531)
Q Consensus 257 ~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgv-pFeF~~v~~~~led 335 (531)
+.-.|+|+|.|.|.- ...||.+. |..+++||+... ..++.+. +-++..|+ .++|. .. ...+
T Consensus 34 ~~~~vLDiGcG~G~~----~~~lA~~~---p~~~v~giD~s~----~~l~~a~----~~~~~~~l~nv~~~--~~-Da~~ 95 (218)
T 3dxy_A 34 EAPVTLEIGFGMGAS----LVAMAKDR---PEQDFLGIEVHS----PGVGACL----ASAHEEGLSNLRVM--CH-DAVE 95 (218)
T ss_dssp CCCEEEEESCTTCHH----HHHHHHHC---TTSEEEEECSCH----HHHHHHH----HHHHHTTCSSEEEE--CS-CHHH
T ss_pred CCCeEEEEeeeChHH----HHHHHHHC---CCCeEEEEEecH----HHHHHHH----HHHHHhCCCcEEEE--EC-CHHH
Confidence 445799999998854 34444432 446999998642 4444443 33445555 35553 22 2222
Q ss_pred ccccccccCCC--CeEEeehHHHhhhhcCCCCCCCChHHHHHHHH-HhcCCcEEEEEecC
Q 009607 336 VKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWI-RNLNPKIMTVVEQE 392 (531)
Q Consensus 336 l~~~~L~i~~g--EaLaVN~~f~LH~L~~e~~~~~~~~~~vL~~I-r~L~PkIvtlvEqE 392 (531)
+-+.. +.++ +.|.+|+....++..... +.--...+|+.+ |.|+|.-++++.-+
T Consensus 96 ~l~~~--~~~~~~d~v~~~~~~p~~~~~~~~--rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 96 VLHKM--IPDNSLRMVQLFFPDPWHKARHNK--RRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp HHHHH--SCTTCEEEEEEESCCCCCSGGGGG--GSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHH--cCCCChheEEEeCCCCccchhhhh--hhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 11111 1223 456666432222111100 000013578777 55999988776643
No 161
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=21.07 E-value=1.4e+02 Score=27.42 Aligned_cols=56 Identities=13% Similarity=-0.041 Sum_probs=34.2
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHH
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLA 313 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~ 313 (531)
.|++.+.-.+.-.|+|+|.|.|.--..|.+.+ .|..+++|++.. ...++.+.+++.
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~------~~~~~v~~~D~~----~~~~~~a~~~~~ 139 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIV------GPEGRVVSYEIR----EDFAKLAWENIK 139 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSC----HHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHh------CCCeEEEEEecC----HHHHHHHHHHHH
Confidence 45566655556689999999985433343333 134599999864 245555554443
No 162
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=20.52 E-value=1.2e+02 Score=29.35 Aligned_cols=52 Identities=13% Similarity=0.045 Sum_probs=32.9
Q ss_pred eEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce--EEEE
Q 009607 259 VHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR--FTFR 326 (531)
Q Consensus 259 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp--FeF~ 326 (531)
-.|+|+|.|.|. +.-.|+.+ |..++|||+.. ...++.+.++ ++..|+. .+|.
T Consensus 125 ~~vLDlG~GsG~----~~~~la~~----~~~~v~~vDis----~~al~~A~~n----~~~~~l~~~v~~~ 178 (284)
T 1nv8_A 125 KTVADIGTGSGA----IGVSVAKF----SDAIVFATDVS----SKAVEIARKN----AERHGVSDRFFVR 178 (284)
T ss_dssp CEEEEESCTTSH----HHHHHHHH----SSCEEEEEESC----HHHHHHHHHH----HHHTTCTTSEEEE
T ss_pred CEEEEEeCchhH----HHHHHHHC----CCCEEEEEECC----HHHHHHHHHH----HHHcCCCCceEEE
Confidence 479999999985 34445544 34699999864 2455544443 4455664 6664
No 163
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=20.51 E-value=1.6e+02 Score=27.33 Aligned_cols=62 Identities=21% Similarity=0.262 Sum_probs=35.7
Q ss_pred hhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHHhCCce---EEEE
Q 009607 251 EAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIR---FTFR 326 (531)
Q Consensus 251 EA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~~lgvp---FeF~ 326 (531)
.....++.-+|+|+|.+.|.-=..|.+++ ||.-+||+|+... ..++.+. +.++..|+. .+|.
T Consensus 50 ~~~~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~~----~~~~~a~----~~~~~~g~~~~~i~~~ 114 (221)
T 3dr5_A 50 ATTNGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPES----EHQRQAK----ALFREAGYSPSRVRFL 114 (221)
T ss_dssp HHSCCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSCH----HHHHHHH----HHHHHTTCCGGGEEEE
T ss_pred HhhCCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECCH----HHHHHHH----HHHHHcCCCcCcEEEE
Confidence 33444455689999988875444444433 2335999998642 3344333 444555665 5554
No 164
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=20.31 E-value=3e+02 Score=25.86 Aligned_cols=55 Identities=15% Similarity=0.100 Sum_probs=32.2
Q ss_pred HHHhhhCCCceeEEEEcccCCCCchHHHHHHHhcCCCCCCeEEEEEeCCCCCCChhHHHHHHHHH
Q 009607 248 AILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRL 312 (531)
Q Consensus 248 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~p~~~~~~~L~etG~rL 312 (531)
.|++.+.-...-.|+|+|.|.|. +...|+.+-+ |..++|+++.. ...++.+.+++
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~----~~~~la~~~~--~~~~v~~vD~s----~~~~~~a~~~~ 157 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGA----MCAVLARAVG--SSGKVFAYEKR----EEFAKLAESNL 157 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHTT--TTCEEEEECCC----HHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEEECCcCCH----HHHHHHHHhC--CCcEEEEEECC----HHHHHHHHHHH
Confidence 45555554445589999999884 3333444321 33599999864 24455444433
Done!